BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025409
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54DD7|UNC50_DICDI Protein unc-50 homolog OS=Dictyostelium discoideum GN=DDB_G0292320
PE=3 SV=1
Length = 261
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 173/262 (66%), Gaps = 10/262 (3%)
Query: 1 MLPTS--------VSKGRSSSSASRTNPMFPQYLRRIIKWQQMDIEYTFWQMLHLCTSPK 52
MLP S +++ ++SSASR + P+Y RRI + QMDIEYTFW M +LC +P
Sbjct: 1 MLPISYTNLNSSRITRDGTASSASRYRRLIPEYFRRIFHYPQMDIEYTFWIMFYLCFNPS 60
Query: 53 VVYQHTKYHKQTKNQWARDDPAFVVICSLLLSVATIAYCAAYDH-SATHAIFVVISVLLF 111
VY+ T +HKQTKNQWARDDPAF VI +++A+++Y + S + I V+ +
Sbjct: 61 RVYRVTSWHKQTKNQWARDDPAFAVILVFFMAIASMSYAITFHFLSFLNVIKVMFWAVFV 120
Query: 112 HFLITGAMLATFCWFLTNSYLREDSPNSHVVEQRVEWLYAFDVHCNSFFPMFVMLYVIHY 171
F+ G ++AT W++TN +LR S ++H V+Q VEWLYAFD+HCNSFFP+F++LYV+ +
Sbjct: 121 DFITVGLLIATIGWWVTNKFLRV-SVHNHSVDQSVEWLYAFDIHCNSFFPLFIILYVVQF 179
Query: 172 FLSPLLMVHGFIPVLLSNLLFMAAASYYHYLNFLGYDVLPFLERTTFFLYPIGVCIVLSP 231
FL P+L+ + +LSN L++ SYY+Y+ FLGY+ LPFL+ T FLYPIG+ L
Sbjct: 180 FLLPILLSNSLFAAILSNTLYIIGFSYYYYVTFLGYNALPFLQHTVVFLYPIGILFALYI 239
Query: 232 ILILSGFNPSRYFMNMYFSWRL 253
+ ++ G N + +N YF ++L
Sbjct: 240 VSVVMGKNLTVSIINFYFGFQL 261
>sp|Q53HI1|UNC50_HUMAN Protein unc-50 homolog OS=Homo sapiens GN=UNC50 PE=1 SV=2
Length = 259
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 144/237 (60%), Gaps = 10/237 (4%)
Query: 4 TSVSKGRSSSSASRTNPMFPQYLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQ 63
S R ++ A R +YLRR+ +++QMD E+ WQML+L TSP+ VY++ Y KQ
Sbjct: 18 NSRDAARHTAGAKRY-----KYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQ 72
Query: 64 TKNQWARDDPAFVVICSLLLSVATIAYCAAYDHSATHAIFVVISVLLFHFLITGAMLATF 123
TK+QWARDDPAF+V+ S+ L V+TI + D I +++ V+L + G ++AT
Sbjct: 73 TKDQWARDDPAFLVLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATL 132
Query: 124 CWFLTNSYLREDSPNSHVVEQRVEWLYAFDVHCNSFFPMFVMLYVIH-YFLSPLLMVHGF 182
WF++N YL + + VEW YAFDVH N+F+P+ V+L+ I +F++ +++ F
Sbjct: 133 MWFISNKYLVKRQSRDY----DVEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTF 188
Query: 183 IPVLLSNLLFMAAASYYHYLNFLGYDVLPFLERTTFFLYPIGVCIVLSPILILSGFN 239
I L+ N L++ A YY Y+ FLGY LPFL+ T LYP I+L + + G+N
Sbjct: 189 IGYLVGNTLWLVAVGYYIYVTFLGYSALPFLKNTVILLYPFAPLILLYGLSLALGWN 245
>sp|O55227|UNC50_RAT Protein unc-50 homolog OS=Rattus norvegicus GN=Unc50 PE=1 SV=1
Length = 259
Score = 177 bits (449), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 143/237 (60%), Gaps = 10/237 (4%)
Query: 4 TSVSKGRSSSSASRTNPMFPQYLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQ 63
S R ++ A R +YLRR+ +++QMD E+ WQML+L TSP+ VY++ Y KQ
Sbjct: 18 NSRDAARHTAGAKRY-----KYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQ 72
Query: 64 TKNQWARDDPAFVVICSLLLSVATIAYCAAYDHSATHAIFVVISVLLFHFLITGAMLATF 123
TK+QWARDDPAF+V+ S+ L V+TI + D I +++ V+ + G +++T
Sbjct: 73 TKDQWARDDPAFLVLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVFIDCVGVGLLISTL 132
Query: 124 CWFLTNSYLREDSPNSHVVEQRVEWLYAFDVHCNSFFPMFVMLYVIH-YFLSPLLMVHGF 182
WF++N YL + + VEW YAFDVH N+F+P+ V+L+ I +F++ +++ F
Sbjct: 133 MWFISNKYLVKRQSRDY----DVEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTF 188
Query: 183 IPVLLSNLLFMAAASYYHYLNFLGYDVLPFLERTTFFLYPIGVCIVLSPILILSGFN 239
I L+ N L++ A YY Y+ FLGY LPFL+ T LYP IVL + + G+N
Sbjct: 189 IGYLVGNTLWLIAVGYYIYVTFLGYSALPFLKNTVVLLYPFAPLIVLYGLSLALGWN 245
>sp|Q3ZBG6|UNC50_BOVIN Protein unc-50 homolog OS=Bos taurus GN=UNC50 PE=2 SV=1
Length = 259
Score = 177 bits (448), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 144/237 (60%), Gaps = 10/237 (4%)
Query: 4 TSVSKGRSSSSASRTNPMFPQYLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQ 63
+S R ++ A R +YLRR+ +++QMD E+ WQML+L TSP+ VY++ Y KQ
Sbjct: 18 SSRDAARHTAGAKRY-----KYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQ 72
Query: 64 TKNQWARDDPAFVVICSLLLSVATIAYCAAYDHSATHAIFVVISVLLFHFLITGAMLATF 123
TK+QWARDDPAF+V+ S+ L V+TI + D I +++ V+ + G +++T
Sbjct: 73 TKDQWARDDPAFLVLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVFIDCVGVGLLISTL 132
Query: 124 CWFLTNSYLREDSPNSHVVEQRVEWLYAFDVHCNSFFPMFVMLYVIH-YFLSPLLMVHGF 182
WF++N YL + + VEW YAFDVH N+F+P+ V+L+ I +F++ +++ F
Sbjct: 133 MWFISNKYLVKRQSRDY----DVEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTF 188
Query: 183 IPVLLSNLLFMAAASYYHYLNFLGYDVLPFLERTTFFLYPIGVCIVLSPILILSGFN 239
I L+ N L++ A YY Y+ FLGY LPFL+ T LYP I+L + + G+N
Sbjct: 189 IGYLVGNTLWLVAVGYYIYVTFLGYSALPFLKNTVILLYPFAPLILLYGLSLALGWN 245
>sp|Q9CQ61|UNC50_MOUSE Protein unc-50 homolog OS=Mus musculus GN=Unc50 PE=2 SV=1
Length = 259
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 143/237 (60%), Gaps = 10/237 (4%)
Query: 4 TSVSKGRSSSSASRTNPMFPQYLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQ 63
S R ++ A R +YLRR+ +++QMD E+ WQML+L TSP+ VY++ Y KQ
Sbjct: 18 NSRDAARHTAGAKRY-----KYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQ 72
Query: 64 TKNQWARDDPAFVVICSLLLSVATIAYCAAYDHSATHAIFVVISVLLFHFLITGAMLATF 123
TK+QWARDDPAF+V+ S+ L V+TI + D I +++ V+ + G +++T
Sbjct: 73 TKDQWARDDPAFLVLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVFIDCVGVGLLISTL 132
Query: 124 CWFLTNSYLREDSPNSHVVEQRVEWLYAFDVHCNSFFPMFVMLYVIH-YFLSPLLMVHGF 182
WF++N YL + + VEW YAFDVH N+F+P+ V+L+ I +F++ +++ F
Sbjct: 133 MWFVSNKYLVKRQSRDY----DVEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTF 188
Query: 183 IPVLLSNLLFMAAASYYHYLNFLGYDVLPFLERTTFFLYPIGVCIVLSPILILSGFN 239
I L+ N L++ A YY Y+ FLGY LPFL+ T LYP +VL + + G+N
Sbjct: 189 IGYLVGNTLWLIAVGYYIYVTFLGYSALPFLKNTVILLYPFAPLMVLYGLSLALGWN 245
>sp|Q7ZUU1|UNC50_DANRE Protein unc-50 homolog OS=Danio rerio GN=unc50 PE=2 SV=1
Length = 259
Score = 168 bits (425), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 151/252 (59%), Gaps = 14/252 (5%)
Query: 1 MLPTSVSKGRSSSSASRTNPMFP-------QYLRRIIKWQQMDIEYTFWQMLHLCTSPKV 53
MLPTS + + S S + +YLRR++ ++QMD E+ WQML+L TSP+
Sbjct: 1 MLPTSSPQIHRNGSLSERDAARHTAGAKRYKYLRRLLHFRQMDFEFAVWQMLYLFTSPQK 60
Query: 54 VYQHTKYHKQTKNQWARDDPAFVVICSLLLSVATIAYCAAYDHSATHAIFVVISVLLFHF 113
VY++ Y KQTK+QWARDDPAF+V+ S+ L V+T+ + D + +++ V+
Sbjct: 61 VYRNFHYRKQTKDQWARDDPAFLVLLSIWLCVSTVGFGLVLDMGFVETLTLLLWVVFIDC 120
Query: 114 LITGAMLATFCWFLTNSYLREDSPNSHVVEQRVEWLYAFDVHCNSFFPMFVMLYVIH-YF 172
+ G +++T WF+TN YL + PN + VEW YAFDVH N+F+P+ V+L+ + +F
Sbjct: 121 IGVGLLISTLMWFVTNKYLMK-HPNR---DYDVEWGYAFDVHLNAFYPLLVILHFLQLFF 176
Query: 173 LSPLLMVHG--FIPVLLSNLLFMAAASYYHYLNFLGYDVLPFLERTTFFLYPIGVCIVLS 230
++ ++++ F+ + N +++ A YY Y+ FLGY LPFL+ T LYP + +L
Sbjct: 177 INHVVVISSDWFLGYFVGNTMWLIAIGYYVYITFLGYSALPFLKNTVVLLYPFALLGLLY 236
Query: 231 PILILSGFNPSR 242
+ I G+N ++
Sbjct: 237 VLSISLGWNFTK 248
>sp|Q6DKM1|UN50A_XENLA Protein unc-50 homolog A OS=Xenopus laevis GN=unc50-a PE=2 SV=1
Length = 259
Score = 167 bits (422), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 138/234 (58%), Gaps = 10/234 (4%)
Query: 7 SKGRSSSSASRTNPMFPQYLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKN 66
R ++ A R +YLRR+ ++QMD E+ WQML+L TSP+ VY++ Y KQTK+
Sbjct: 21 EAARHTAGAKRY-----KYLRRLFHFKQMDFEFALWQMLYLFTSPQKVYRNFHYRKQTKD 75
Query: 67 QWARDDPAFVVICSLLLSVATIAYCAAYDHSATHAIFVVISVLLFHFLITGAMLATFCWF 126
QWARDDPAF+V+ S+ L V+T+ + D S +++ V+ + G ++AT WF
Sbjct: 76 QWARDDPAFLVLLSIWLCVSTVGFGFVLDMSFFETFKLLLWVVFIDCVGVGLLIATLMWF 135
Query: 127 LTNSYLREDSPNSHVVEQRVEWLYAFDVHCNSFFPMFVMLYVIH-YFLSPLLMVHGFIPV 185
++N Y+ + + VEW Y FDVH N+F+P+ V+L+ I +F++ +++ FI
Sbjct: 136 VSNKYMVKRQGKDY----DVEWGYTFDVHLNAFYPLLVILHFIQLFFINHVILSGWFIGY 191
Query: 186 LLSNLLFMAAASYYHYLNFLGYDVLPFLERTTFFLYPIGVCIVLSPILILSGFN 239
+ N +++ A YY Y+ FLGY LPFL+ T LYP +L + + G+N
Sbjct: 192 FVGNTIWLIAIGYYIYITFLGYSALPFLKNTVILLYPFAALALLYVLSLALGWN 245
>sp|Q5U520|UN50B_XENLA Protein unc-50 homolog B OS=Xenopus laevis GN=unc50-b PE=2 SV=1
Length = 259
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 143/249 (57%), Gaps = 14/249 (5%)
Query: 1 MLPTSVSKGRSSSS-------ASR--TNPMFPQYLRRIIKWQQMDIEYTFWQMLHLCTSP 51
MLPT+ RS + A+R +YLRR+ ++QMD E+ WQML+L TSP
Sbjct: 1 MLPTTSVSPRSPDNGILSPRDATRHTAGAKRYKYLRRLFHFKQMDFEFALWQMLYLFTSP 60
Query: 52 KVVYQHTKYHKQTKNQWARDDPAFVVICSLLLSVATIAYCAAYDHSATHAIFVVISVLLF 111
+ VY++ Y KQTK+QWARDDPAF+V+ + L V+T+ + D S +++ V+
Sbjct: 61 QKVYRNFHYRKQTKDQWARDDPAFLVLLGIWLCVSTVGFGFVLDMSFFETFTLLLWVVFI 120
Query: 112 HFLITGAMLATFCWFLTNSYLREDSPNSHVVEQRVEWLYAFDVHCNSFFPMFVMLYVIH- 170
+ G ++AT WF++N Y+ N + VEW Y FDVH N+F+P+ V+L+ I
Sbjct: 121 DCVGVGLLIATSMWFVSNKYM----VNRQGKDYDVEWGYTFDVHLNAFYPLLVILHFIQL 176
Query: 171 YFLSPLLMVHGFIPVLLSNLLFMAAASYYHYLNFLGYDVLPFLERTTFFLYPIGVCIVLS 230
+F++ +++ FI + N L++ A YY Y+ FLGY LPFL+ T LYP +L
Sbjct: 177 FFINHVILTGWFIGCFVGNTLWLIAIGYYIYITFLGYSALPFLKNTVVLLYPFAALALLY 236
Query: 231 PILILSGFN 239
+ + G+N
Sbjct: 237 ILSLALGWN 245
>sp|Q9VHN5|UNC50_DROME Protein unc-50 homolog OS=Drosophila melanogaster GN=CG9773 PE=1
SV=1
Length = 275
Score = 150 bits (379), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 143/248 (57%), Gaps = 9/248 (3%)
Query: 2 LPTSVSKGRSSSSASRTNPMFPQYLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH 61
LP + R SA+ + +YLRR++K+ QMD E+ WQML+L +P+ VY++ Y
Sbjct: 31 LPPPANHRRDCLSATTKSY---KYLRRLLKFNQMDFEFALWQMLYLFVAPQKVYRNFNYR 87
Query: 62 KQTKNQWARDDPAFVVICSLLLSVATIAYCAAYDHSATHAIFVVISVLLFHFLITGAMLA 121
KQTK+Q+ARDDPAF+V+ + L V ++ + S +I + V+ + G ++A
Sbjct: 88 KQTKSQFARDDPAFLVLLVVCLCVTSLGFAYVLGLSFWQSISFIFYVVFVDCIFVGIIIA 147
Query: 122 TFCWFLTNSYLREDSPNSHVVEQRVEWLYAFDVHCNSFFPMFVMLYVIH-YFLSPLLMVH 180
+F W +TN YLR +S +E +EW YAFDVH N+FFP ++L+ I +F + L+
Sbjct: 148 SFFWAVTNRYLRTNS-----LEPDIEWGYAFDVHLNAFFPPLMLLHFIQLFFYNWLISQT 202
Query: 181 GFIPVLLSNLLFMAAASYYHYLNFLGYDVLPFLERTTFFLYPIGVCIVLSPILILSGFNP 240
FI L N ++ YY Y+ FLGY+ +P L+ T L + + +L ++ + G+N
Sbjct: 203 WFISRFLGNTFWLMGMGYYVYITFLGYNCIPHLKNTRIILIALPIIFLLFLVVTIIGWNA 262
Query: 241 SRYFMNMY 248
+ F+N Y
Sbjct: 263 TISFVNFY 270
>sp|Q10045|UNC50_CAEEL Protein unc-50 OS=Caenorhabditis elegans GN=unc-50 PE=2 SV=2
Length = 301
Score = 147 bits (371), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 132/228 (57%), Gaps = 7/228 (3%)
Query: 24 QYLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSLLL 83
++ RR++ +QMD E+ WQML+L P VY++ Y K+TK+Q+ARDDPAF+V+ +L L
Sbjct: 66 RFTRRLVHIRQMDFEFALWQMLYLLIQPSKVYKNFIYRKRTKDQFARDDPAFLVLLALSL 125
Query: 84 SVATIAYCAAYDHSATHAIFVVISVLLFHFLITGAMLATFCWFLTNSYLREDSPNSHVVE 143
++I Y A + + + G ++AT W+++N +LR+ V +
Sbjct: 126 LFSSIFYAYALGLEKIGFFTFFLWSVFVDCIGVGVVIATVLWWVSNRFLRK------VRD 179
Query: 144 QRVEWLYAFDVHCNSFFPMFVMLYVIHYFLSPLLMVH-GFIPVLLSNLLFMAAASYYHYL 202
Q VEW Y FDVH N+FFPM ++L+VI L P L+ F+ +LL N + AA YY Y+
Sbjct: 180 QDVEWGYCFDVHLNAFFPMLILLHVIVPILYPTLIDSPAFLSILLGNTFWFLAACYYVYI 239
Query: 203 NFLGYDVLPFLERTTFFLYPIGVCIVLSPILILSGFNPSRYFMNMYFS 250
FLGY LP L +T +FLYPI + + G+N SR +N Y S
Sbjct: 240 TFLGYTALPILHKTQYFLYPISFIFMFFVATLTGGWNISRTALNFYHS 287
>sp|P87155|MUG16_SCHPO Protein GMH1 homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mug16 PE=1 SV=1
Length = 235
Score = 147 bits (370), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Query: 28 RIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSLLLSVAT 87
R++K QMD E +W M +L +P+ VY+ KQ N++ R+D +F+V+ S ++ ++
Sbjct: 10 RLLKLSQMDFERAWWDMANLFRAPRRVYRSITLRKQNINRYGREDFSFIVLFSCMIVISA 69
Query: 88 IAYCAAYDHSATHAIFVVISVLLFHFLITGAMLATFCWFLTNSYL-REDSPNSHVVEQRV 146
+ + Y ++ + + +L F G ++AT +F+ +L + + + ++
Sbjct: 70 LLWALFYMNTPKGYVTTITFMLFVDFGAVGVIMATMYYFIAKRFLMKSNDTILSSTDYQL 129
Query: 147 EWLYAFDVHCNSFFPMFVMLYVIHYFLSPLLMVHGFIPVLLSNLLFMAAASYYHYLNFLG 206
EW Y FDVHCNSFFP FV+LYVI FL P++ FI + + N L++ A YY YL F+G
Sbjct: 130 EWNYCFDVHCNSFFPSFVLLYVIQLFLLPVITRDNFISLFMGNTLYLVALCYYSYLTFIG 189
Query: 207 YDVLPFLERTTFFLYPIGVCIVLSPILILSGFNPSRYFMNMYFS 250
Y +LPFL+ T L PI + ++ + +L GFN ++ +++YF
Sbjct: 190 YQILPFLKNTHALLLPIPMFFIMWALSLL-GFNVPKHVVDVYFG 232
>sp|P36125|GMH1_YEAST Protein GMH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GMH1 PE=1 SV=1
Length = 273
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 125/248 (50%), Gaps = 25/248 (10%)
Query: 2 LPTSVSKGRSSSSASRTNPM-------FPQYLRRIIKW-QQMDIEYTFWQMLHLCTSPKV 53
LP R ++ + + P +RR+ K + +D+E W+M HL P+
Sbjct: 11 LPAGPQGQRRRNNGNENDARQGYGQQSVPMVIRRLFKTPKNLDLETASWEMFHLIFHPRK 70
Query: 54 VYQHTKYHKQTKNQWARDDPAFVVI---CSLLLSVATIAYCAAYDHSATHAIFVVIS--- 107
Y+ Y +QTKNQWARDDP+F + L S+ Y + +++ + +I
Sbjct: 71 AYRSIYYQRQTKNQWARDDPSFFIFQIALISLSSIIWSIYNSGFNNDSDMGALSIIGHFF 130
Query: 108 -----VLLFHFLITGAMLATFCWFLTN-SYLREDSPNSHVVEQRVEWLYAFDVHCNSFFP 161
+++ F I G ++AT + L N S+ + S + VVE W Y FDVHCNSF
Sbjct: 131 KSLVMMVILDFFIFGFIMATIFYLLLNRSHFKFKSSQNSVVE----WAYCFDVHCNSFLI 186
Query: 162 MFVMLYVIHYFLSPLLMVHGFIPVLLSNLLFMAAASYYHYLNFLGYDVLPFLERTTFFLY 221
+ + LY I + L P++ + +I +L+ N L+ A +Y L F GY+ LPFL+ F L
Sbjct: 187 ILLCLYFIQFLLLPIINLQNWISLLIGNSLYCFAIGHYFILTFYGYNQLPFLKNLNFILL 246
Query: 222 P-IGVCIV 228
P +G+ I+
Sbjct: 247 PTLGLSII 254
>sp|B9KW13|CTAA_RHOSK Heme A synthase OS=Rhodobacter sphaeroides (strain KD131 / KCTC
12085) GN=ctaA PE=3 SV=1
Length = 391
Score = 34.7 bits (78), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 19 NPMFPQYLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI 78
NP F Q+L R+ + + FW ++ H+ T+ A D A ++
Sbjct: 292 NPGFVQFLHRMAGYALAALGLIFW-----------IFGRRSRHRATRG--AFDLLAMALL 338
Query: 79 CSLLLSVATIAYCAAYDHSATHAIF-VVISVLLFH 112
+LL V T+ A + + H + VVI VL+ H
Sbjct: 339 AQILLGVGTVLSAAEWQVAIAHQVGAVVIWVLILH 373
>sp|Q3IXW9|CTAA_RHOS4 Heme A synthase OS=Rhodobacter sphaeroides (strain ATCC 17023 /
2.4.1 / NCIB 8253 / DSM 158) GN=ctaA PE=1 SV=1
Length = 391
Score = 34.7 bits (78), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 19 NPMFPQYLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI 78
NP F Q+L R+ + + FW ++ H+ T+ A D A ++
Sbjct: 292 NPGFVQFLHRMAGYTLAALGLIFW-----------IFGRRSRHRATRG--AFDLLAMALL 338
Query: 79 CSLLLSVATIAYCAAYDHSATHAIF-VVISVLLFH 112
+LL V T+ A + + H + VVI VL+ H
Sbjct: 339 AQILLGVGTVLSAAEWQVAIAHQVGAVVIWVLILH 373
>sp|A3PQK0|CTAA_RHOS1 Heme A synthase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH
2.4.9) GN=ctaA PE=3 SV=1
Length = 391
Score = 34.7 bits (78), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 19 NPMFPQYLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI 78
NP F Q+L R+ + + FW ++ H+ T+ A D A ++
Sbjct: 292 NPGFVQFLHRMAGYTLAALGLIFW-----------IFGRRSRHRATRG--AFDLLAMALL 338
Query: 79 CSLLLSVATIAYCAAYDHSATHAIF-VVISVLLFH 112
+LL V T+ A + + H + VVI VL+ H
Sbjct: 339 AQILLGVGTVLSAAEWQVAIAHQVGAVVIWVLILH 373
>sp|P50077|CCH1_YEAST Calcium-channel protein CCH1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CCH1 PE=1 SV=1
Length = 2039
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 22/189 (11%)
Query: 74 AFVVICSLLLSVATIAYCAAYDHSATHAIFVVISVLLFHFLITGAMLATFCWFLTNSYLR 133
+V + +++ + I A SA +A+F+V LF+FL +L F F+ N+ R
Sbjct: 1423 GWVDLLENMMNSSGIGTPATVMGSAGNALFLV----LFNFLSMVFILNLFVSFIVNNQAR 1478
Query: 134 EDSPNSHVVEQRVEWLYAFDVHCNS---FFPMFVMLYVIHYFLSPLLMVH------GFIP 184
+E++ WL + + + P + L + F L + F+
Sbjct: 1479 TTGSAYFTIEEKA-WLESQKLLSQAKPKAIPNLIELSRVRQFFYQLAVEKKNFYYASFLQ 1537
Query: 185 VLLSNLLFMAAASYYHYLNFLGYDVLPFLERTTFFLYPIGVCIVLSPILILSGFNPSRYF 244
V+L + M + Y+ N +GY + F+ T+ FL + L + G P YF
Sbjct: 1538 VVLYLHIIMLLSRSYNPGNLIGYQGVYFMFSTSVFL--------IQEALHMCGEGPRLYF 1589
Query: 245 MNMYFSWRL 253
+ S RL
Sbjct: 1590 RQKWNSIRL 1598
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.141 0.463
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,787,092
Number of Sequences: 539616
Number of extensions: 3606031
Number of successful extensions: 9308
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 9271
Number of HSP's gapped (non-prelim): 24
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 60 (27.7 bits)