BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025411
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H1G0|GAT28_ARATH GATA transcription factor 28 OS=Arabidopsis thaliana GN=GATA28 PE=2
SV=1
Length = 302
Score = 342 bits (878), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/255 (69%), Positives = 202/255 (79%), Gaps = 10/255 (3%)
Query: 3 HGSNPQMQMSDEQHAIHHVNYVPEHELHHISNGDVM-DDEHDEGNGVGESEAMEGDAPSD 61
HGSN +M + + Q +H V + H LHHI NG M DD+ D+GN G SE +E D PS
Sbjct: 5 HGSNARMHIREAQDPMH-VQF-EHHALHHIHNGSGMVDDQADDGNAGGMSEGVETDIPSH 62
Query: 62 PGSLSDNRAV-----SEIGDQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREVPSTTPAI 116
PG+++DNR SE GDQLTLSFQGQVYVFDSV PEKVQAVLLLLGGRE+P P
Sbjct: 63 PGNVTDNRGEVVDRGSEQGDQLTLSFQGQVYVFDSVLPEKVQAVLLLLGGRELPQAAPPG 122
Query: 117 PIANNQNNR--GLPGTPQRLSVPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRN 174
+ +QNNR LPGTPQR S+PQRLASL+RFREKRK RNF+KKIRYTVRKEVALRMQRN
Sbjct: 123 LGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRN 182
Query: 175 KGQFTSAKSNNEDSASAISSWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEG 234
KGQFTSAKSNN+++ASA SSWGSNQ+WA + + +Q+Q+I CRHCGI EKSTPMMRRGP G
Sbjct: 183 KGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRRGPAG 242
Query: 235 PRTLCNACGLMWANK 249
PRTLCNACGLMWANK
Sbjct: 243 PRTLCNACGLMWANK 257
>sp|Q8GXL7|GAT24_ARATH GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2
SV=2
Length = 297
Score = 324 bits (830), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/260 (66%), Positives = 197/260 (75%), Gaps = 14/260 (5%)
Query: 3 HGSNPQMQMSDEQHAIHHVNYVPEHELHHISNGDVMDDEHDEGNGVGESEAMEGDAPSDP 62
HG N +M + Q+ +H V Y +H LHHI N + M D+H +G G E +E D PS P
Sbjct: 5 HGRNGRMHIGVAQNPMH-VQY-EDHGLHHIDNENSMMDDHADG---GMDEGVETDIPSHP 59
Query: 63 GSLSDNRAVS-----EIGDQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREVPSTTPAIP 117
G+ +DNR E GDQLTLSFQGQVYVFD VSPEKVQAVLLLLGGREVP T P
Sbjct: 60 GNSADNRGEVVDRGIENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTL 119
Query: 118 IANNQNNR--GLPGTPQRLSVPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNK 175
+ +QNNR GL GTPQRLSVPQRLASL+RFREKRK RNF+K IRYTVRKEVALRMQR K
Sbjct: 120 GSPHQNNRVLGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKK 179
Query: 176 GQFTSAKSNNEDSASAISSWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGP 235
GQFTSAKS+N+DS S S WGSNQSWA + +Q +++CRHCG SEKSTPMMRRGP+GP
Sbjct: 180 GQFTSAKSSNDDSGSTGSDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGP 239
Query: 236 RTLCNACGLMWANK--VREL 253
RTLCNACGLMWANK +R+L
Sbjct: 240 RTLCNACGLMWANKGTLRDL 259
>sp|Q9LRH6|GAT25_ARATH GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2
SV=2
Length = 309
Score = 184 bits (468), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 123/184 (66%), Gaps = 11/184 (5%)
Query: 73 EIGDQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREVPSTTPAI-PIANNQNNRGLPGTP 131
E +QLT+SF+GQVYVFD+V +KV AVL LLGG + P + +A QN+ +
Sbjct: 79 EGANQLTISFRGQVYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQNHMPVVEYQ 138
Query: 132 QRLSVPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASA 191
R S+PQR SL RFR+KR R FEKK+RY VR+EVALRM RNKGQFTS+K +
Sbjct: 139 SRCSLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTD-----G 193
Query: 192 ISSWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANK-- 249
+ G++Q A D + +I C HCGIS K TPMMRRGP GPRTLCNACGL WAN+
Sbjct: 194 AYNSGTDQDSAQD---DAHPEISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGT 250
Query: 250 VREL 253
+R+L
Sbjct: 251 LRDL 254
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 18/144 (12%)
Query: 60 SDPGSLSDNRAVSEIGDQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREVPSTTPAIPIA 119
SD GS + + IG ++SF+ QV + +V+ +K + + + RE + + +
Sbjct: 328 SDQGSATTSSNQENIGSS-SVSFRNQV-LQSTVTNQKQDSPIPVESNRE-KAASKEVEAG 384
Query: 120 NNQNNRGLPG-------------TPQRLSVPQRLASLIRFREKRKERNFEKKIRYTVRKE 166
+ N G+ G QR S QR A+L++FR KRK+R F+KK+RY RK+
Sbjct: 385 SQSTNEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKK 444
Query: 167 VALRMQRNKGQFTSAKSNNEDSAS 190
+A + R KGQF ++ N D+++
Sbjct: 445 LAEQRPRVKGQF--VRTVNSDAST 466
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1
PE=1 SV=1
Length = 355
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 111 STTPAIPIANNQNNRGLPGTP-----QRLSVPQRLASLIRFREKRKERNFEKKIRYTVRK 165
STT ++N ++ + + P Q LS R A ++R+REK+K R FEK IRY RK
Sbjct: 253 STTSDATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRK 312
Query: 166 EVALRMQRNKGQFTSAKSNNEDSASAISS 194
A + R KG+F K +E++ A S+
Sbjct: 313 AYAEKRPRIKGRFAKKKDVDEEANQAFST 341
>sp|B0G188|GTAP_DICDI GATA zinc finger domain-containing protein 16 OS=Dictyostelium
discoideum GN=gtaP PE=4 SV=1
Length = 695
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 212 DIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKVR 251
++ C CG++ +TP RRGP G +TLCNACGL WA V+
Sbjct: 476 ELSCHTCGVT--NTPEWRRGPNGAKTLCNACGLAWAKSVK 513
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 139 RLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFT 179
R+A++I+FR+KRKERNF KK+RY RK +A + R +GQF
Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFV 722
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 139 RLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFT 179
R+A++I+FR+KRKERNF KK+RY RK +A + R +GQF
Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFV 722
>sp|Q00858|CGPB_FUSSO Cutinase gene palindrome-binding protein OS=Fusarium solani subsp.
pisi PE=2 SV=1
Length = 457
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 210 NQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKVRE 252
+++ VC CG + +P R+GP GP+TLCNACGL WA K ++
Sbjct: 397 SEEYVCTDCGTLD--SPEWRKGPSGPKTLCNACGLRWAKKEKK 437
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Query: 136 VPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQF---TSAKSNNED 187
+ QR A+L +FR+KRKER F KK+RY RK++A + R +GQF T+A +++ D
Sbjct: 666 ISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDDND 720
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4
PE=2 SV=2
Length = 362
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 110 PSTTPAIPIANNQNNRGLPGTPQRLSVPQRLASLIRFREKRKERNFEKKIRYTVRKEVAL 169
P PA A+ R +P L+ +R A ++R+REKRK R FEK IRY RK A
Sbjct: 271 PYGGPATSGADPGTQRAVP-----LTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAE 325
Query: 170 RMQRNKGQFTSAKSNNE 186
R KG+F NE
Sbjct: 326 MRPRIKGRFAKRTDTNE 342
>sp|Q54TM6|GTAI_DICDI GATA zinc finger domain-containing protein 9 OS=Dictyostelium
discoideum GN=gtaI PE=4 SV=1
Length = 536
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 2/39 (5%)
Query: 213 IVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKVR 251
+ CRHCG ++ TP RRGP+G ++LCNACGL ++ V+
Sbjct: 477 LFCRHCGTTD--TPEWRRGPDGRKSLCNACGLHYSKLVK 513
>sp|Q75JZ0|GTAH_DICDI GATA zinc finger domain-containing protein 8 OS=Dictyostelium
discoideum GN=gtaH PE=4 SV=1
Length = 519
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Query: 214 VCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKVR 251
VCR+C +E TP R+GP+G ++LCNACGL +A V+
Sbjct: 461 VCRNCKTTE--TPEWRKGPDGTKSLCNACGLHYAKNVK 496
>sp|Q55C49|GTAG_DICDI GATA zinc finger domain-containing protein 7 OS=Dictyostelium
discoideum GN=gtaG PE=4 SV=1
Length = 1006
Score = 50.4 bits (119), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 213 IVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKVRE 252
+ C +CG K+TP RRGP GP TLCNACGL +A K RE
Sbjct: 840 LYCHNCGT--KNTPEWRRGPSGPATLCNACGLAYAKKQRE 877
>sp|P40209|GAT2_YEAST Protein GAT2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GAT2 PE=4 SV=1
Length = 560
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 214 VCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKVREL 253
C HCG E TP R+GP G RTLCNACGL + ++
Sbjct: 471 FCFHCG--ETETPEWRKGPYGTRTLCNACGLFYRKVTKKF 508
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 118 IANNQNNRGLPGTPQRLS-VPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKG 176
IA +++ +P P L + QR A+L +FR KRK+R FEKK+RY RK +A + R KG
Sbjct: 552 IAPTESSNVVPENPDGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKG 611
Query: 177 QF 178
QF
Sbjct: 612 QF 613
>sp|Q54TE3|GTAJ_DICDI GATA zinc finger domain-containing protein 10 OS=Dictyostelium
discoideum GN=gtaJ PE=4 SV=1
Length = 714
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 208 SQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKVREL 253
S +++ C +C ++E TP RRGP+G TLCNACGL +A ++L
Sbjct: 624 SSRRNLKCHYCEVTE--TPEWRRGPDGDHTLCNACGLHYAKSQKKL 667
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 138 QRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQF 178
QR A+L++FR KRKER FEKK+RY RK++A + KGQF
Sbjct: 441 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQF 481
>sp|P78714|WC2_NEUCR White collar 2 protein OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=wc-2
PE=1 SV=1
Length = 530
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 211 QDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWA 247
++ VC CG + +P R+GP GP+TLCNACGL WA
Sbjct: 464 EEYVCTDCGTLD--SPEWRKGPSGPKTLCNACGLRWA 498
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 138 QRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFT 179
QR A+L +FR KRK+R +EKK+RY RK++A + R KGQF
Sbjct: 508 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFV 549
>sp|Q54HA4|GTAO_DICDI GATA zinc finger domain-containing protein 15 (Fragment)
OS=Dictyostelium discoideum GN=gtaO PE=4 SV=1
Length = 511
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
Query: 205 VNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWA-NKVRE 252
+ S +++IVC+ CG +++P R+GP+G ++LCNACGL +A K RE
Sbjct: 443 LQSSNSEEIVCQACGT--RASPEWRKGPDGFKSLCNACGLYYAKTKKRE 489
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 136 VPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSA 189
V R A+L +FR+KRK RNF KK+RY RK +A + R +GQF +S ED A
Sbjct: 709 VCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVR-QSGQEDQA 761
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 136 VPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSA 189
V R A+L +FR+KRK RNF KK+RY RK +A + R +GQF +S ED A
Sbjct: 709 VCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVR-QSGQEDQA 761
>sp|Q9SKN6|GAT13_ARATH Putative GATA transcription factor 13 OS=Arabidopsis thaliana
GN=GATA13 PE=3 SV=2
Length = 291
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 21/131 (16%)
Query: 117 PIANNQNNRGLPGTPQRLSVPQRLASLIR-FREKRKERNFEKKIRYTVRKEVALRMQRNK 175
P++ +N G G+PQ + Q+LA L++ R KRK +R T K L M +
Sbjct: 112 PVSVLKNTNG-SGSPQNPNGDQKLAFLVKGIRSKRKRPTL---LRVTFLKSFLLEMSQ-- 165
Query: 176 GQFTSAKSNNEDSASAISSWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGP 235
QF + +E +S IS+ ++++ + C HC + +TP R GP G
Sbjct: 166 -QF----APDESESSEISA-------LKKRKKNKSRRLKCTHCETT--TTPQWREGPNGR 211
Query: 236 RTLCNACGLMW 246
+TLCNACG+ +
Sbjct: 212 KTLCNACGIRF 222
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 138 QRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFT 179
+R +L++FR KR +R F+KKIRY RK +A R R KGQF
Sbjct: 532 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFV 573
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 138 QRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFT 179
+R A+L +FR KRKER F+KK+RY RK++A R +GQF
Sbjct: 442 RRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFV 483
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3
PE=1 SV=1
Length = 294
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 133 RLSVPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNED 187
+LS +R A ++R+REKRK R FEK IRY RK A R KG+F + E+
Sbjct: 223 QLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSREN 277
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana GN=COL8
PE=2 SV=2
Length = 319
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 118 IANNQNNRGL--PGTPQRLSVPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNK 175
+ NN ++ L PG ++ +R A + R+R+KRK R FEKKIRY VRK A + R K
Sbjct: 248 VKNNTSSFQLVPPGIEEKRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMK 307
Query: 176 GQFT 179
G+F
Sbjct: 308 GRFV 311
>sp|O13415|AREA_ASPOR Nitrogen regulatory protein areA OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=areA PE=4 SV=1
Length = 866
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 140 LASLIRFREKRKERNFEKKIRYTVRKEVA--LRMQRNKGQFTSAKSNNEDSASAISSWGS 197
+AS+ R + ++ +K R T A LR + TS S N SA+SS
Sbjct: 583 VASVSEVRNREQDPRRQKIARTTSTPNTAQLLRQSMHSNNNTSHTSPNTPPESALSSAVP 642
Query: 198 NQ--SWAGDVNGSQ--NQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLM 245
++ S G NG Q N C +C ++TP+ RR PEG + LCNACGL
Sbjct: 643 SRPASPGGSKNGDQGSNGPTTCTNCFT--QTTPLWRRNPEG-QPLCNACGLF 691
>sp|O82632|GATA9_ARATH GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2
SV=1
Length = 308
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 26/90 (28%)
Query: 181 AKSNNEDSASAISSWGS---------------------NQSWAGDVN---GSQNQDIVCR 216
AK+ ++ S SA S+W S Q +AGD++ G C
Sbjct: 141 AKARSKRSRSAASTWASRLLSLADSDETNPKKKQRRVKEQDFAGDMDVDCGESGGGRRCL 200
Query: 217 HCGISEKSTPMMRRGPEGPRTLCNACGLMW 246
HC + TP R GP GP+TLCNACG+ +
Sbjct: 201 HCAT--EKTPQWRTGPMGPKTLCNACGVRY 228
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 120 NNQNNRGL-----PGTPQRLSVPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRN 174
NN NR G + S R A ++R+REKRK R FEK IRY RK A R
Sbjct: 261 NNSVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRI 320
Query: 175 KGQFTS-AKSNNED 187
KG+F ++ N+D
Sbjct: 321 KGRFAKRTETENDD 334
>sp|Q75JZ1|GTAC_DICDI GATA zinc finger domain-containing protein 3 OS=Dictyostelium
discoideum GN=gtaC PE=4 SV=1
Length = 587
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 205 VNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKVRE 252
V +++ C CG E TP R+GP G +TLCNACGL +A +++
Sbjct: 490 VTTPKSKGTYCIFCGTME--TPEWRKGPGGHKTLCNACGLHYAKNIKK 535
>sp|P17429|AREA_EMENI Nitrogen regulatory protein areA OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=areA PE=1 SV=2
Length = 876
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 141 ASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASAISSWGSNQ- 199
AS+ R + ++ +K R + A ++++ +S S N S ++S ++
Sbjct: 597 ASVSEVRNRDQDPRRQKIARTSSTPNTAQLLRQSMQNQSSHTSPNTPPESGLNSAAPSRP 656
Query: 200 -SWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLM 245
S G NG QN C +C ++TP+ RR PEG + LCNACGL
Sbjct: 657 ASPGGTKNGEQNGPTTCTNCFT--QTTPLWRRNPEG-QPLCNACGLF 700
>sp|Q55EQ0|GTAF_DICDI GATA zinc finger domain-containing protein 6 OS=Dictyostelium
discoideum GN=gtaF PE=4 SV=1
Length = 623
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 213 IVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKV 250
+ C CG E T RRGP+G ++LCNACG+ +AN V
Sbjct: 318 LYCHSCG--ETQTSQWRRGPDGCKSLCNACGIRFANIV 353
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2
PE=1 SV=1
Length = 347
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 127 LPGTP----QRLSVPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQF 178
L G P Q+L+ +R A ++R+REK+K R F+K IRY RK A R KG+F
Sbjct: 262 LSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRF 317
>sp|Q54NM5|GTAL_DICDI GATA zinc finger domain-containing protein 12 OS=Dictyostelium
discoideum GN=gtaL PE=4 SV=1
Length = 640
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 214 VCRHCGISEKSTPMMRRGPEGPRTLCNACGLMW 246
VC +C S+ TP RRGP+G +TLCNACG+ +
Sbjct: 505 VCVNCKTSD--TPEWRRGPQGAKTLCNACGIRY 535
>sp|O13412|AREA_ASPNG Nitrogen regulatory protein areA OS=Aspergillus niger GN=areA PE=4
SV=1
Length = 882
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 141 ASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASAISSWGSNQ- 199
AS+ R + ++ +K R T A ++++ TS S N S +SS ++
Sbjct: 599 ASVSEVRNREQDPRRQKIARTTSTPNTAQLLRQSMNANTSHTSPNTPPESGLSSAVPSRP 658
Query: 200 -SWAGDVNGSQNQ-DIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLM 245
S G NG Q+ C +C ++TP+ RR PEG + LCNACGL
Sbjct: 659 ASPGGSKNGEQSSGPTTCTNCFT--QTTPLWRRNPEG-QPLCNACGLF 703
>sp|Q550D5|GTAA_DICDI Transcription factor stalky OS=Dictyostelium discoideum GN=stkA
PE=1 SV=1
Length = 872
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 215 CRHCGISEKSTPMMRRGPEGPRTLCNACGLMW 246
C CG S+ TP RRGP G +LCNACG+ W
Sbjct: 294 CEFCGSSQ--TPTWRRGPSGKGSLCNACGIKW 323
>sp|Q9SZI6|GAT22_ARATH Putative GATA transcription factor 22 OS=Arabidopsis thaliana
GN=GATA22 PE=2 SV=1
Length = 352
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 171 MQRNKGQFTSAKSNNEDSASAISSWGSNQSWAGDVNGSQNQDIVCRHCG-ISEKSTPMMR 229
M++ K T++ S+ + + + SS SN + N D V R C + TP+ R
Sbjct: 158 MKKKKAIITTSDSSKQHTNNDQSSNLSN----SERQNGYNNDCVIRICSDCNTTKTPLWR 213
Query: 230 RGPEGPRTLCNACGL 244
GP GP++LCNACG+
Sbjct: 214 SGPRGPKSLCNACGI 228
>sp|Q8LAU9|GATA1_ARATH GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2
SV=2
Length = 274
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%), Gaps = 2/32 (6%)
Query: 215 CRHCGISEKSTPMMRRGPEGPRTLCNACGLMW 246
C+HCG +EK TP R GP GP+TLCNACG+ +
Sbjct: 196 CQHCG-AEK-TPQWRAGPAGPKTLCNACGVRY 225
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 130 TPQRLSVPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQF 178
T +LS R A ++R+REKRK R FEK IRY RK A R G+F
Sbjct: 297 TVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRF 345
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2
SV=1
Length = 395
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 134 LSVPQRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFT 179
S R A ++R+REK+K R FEK IRY RK A R KG+F
Sbjct: 321 FSSMDREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFA 366
>sp|Q54KX0|GTAN_DICDI GATA zinc finger domain-containing protein 14 OS=Dictyostelium
discoideum GN=gtaN PE=4 SV=1
Length = 953
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 213 IVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKVRE 252
+ C CG ++ TP R+GP G ++LCNACGL +A +++
Sbjct: 891 LFCTSCGTTQ--TPEWRKGPAGGKSLCNACGLHYAKLMKK 928
>sp|Q55GK0|GTAE_DICDI GATA zinc finger domain-containing protein 5 OS=Dictyostelium
discoideum GN=gtaE PE=4 SV=1
Length = 952
Score = 44.7 bits (104), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 215 CRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANK 249
C C S +TP R+GPEGP TLCNACGL +A K
Sbjct: 241 CYQCNTS--NTPEWRKGPEGPATLCNACGLAYAKK 273
>sp|Q8LG10|GAT15_ARATH GATA transcription factor 15 OS=Arabidopsis thaliana GN=GATA15 PE=2
SV=2
Length = 149
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 210 NQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKVREL 253
N+ C CG S+ TP+ R GP GP++LCNACG+ K R L
Sbjct: 38 NEKKSCAICGTSK--TPLWRGGPAGPKSLCNACGIRNRKKRRTL 79
>sp|Q9LU68|CIA2_ARATH Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana
GN=CIA2 PE=2 SV=1
Length = 435
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 139 RLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQF 178
R AS++R++EKR+ R F KKIRY VRK A + R KG+F
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRF 422
>sp|Q9USM3|SFH1_SCHPO Chromatin structure-remodeling complex subunit sfh1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sfh1 PE=1 SV=1
Length = 418
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 215 CRHCGISEKSTPMMRRGPEGPRTLCNACGLMWA 247
CR C + T +RRGPEG ++LCNACG+ +A
Sbjct: 372 CRWCNVLGTGTFCVRRGPEGNKSLCNACGVAYA 404
>sp|Q5KSV0|GTAK_DICDI GATA zinc finger domain-containing protein 11 OS=Dictyostelium
discoideum GN=gtaK PE=2 SV=1
Length = 650
Score = 44.3 bits (103), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 215 CRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKVR 251
C CG + S+P R+GP G ++LCNACGL +A VR
Sbjct: 522 CTSCGTT--SSPEWRKGPAGNQSLCNACGLYFAKLVR 556
>sp|Q9M1U2|GAT14_ARATH GATA transcription factor 14 OS=Arabidopsis thaliana GN=GATA14 PE=2
SV=1
Length = 204
Score = 44.3 bits (103), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 212 DIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMW 246
D C HCG + TP+ R GP G TLCNACG+ +
Sbjct: 114 DKSCSHCGT--RKTPLWREGPRGAGTLCNACGMRY 146
>sp|Q8VZP4|GAT10_ARATH GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2
SV=1
Length = 308
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 214 VCRHCGISEKSTPMMRRGPEGPRTLCNACGLMW 246
+C HC +TP R+GP GP+TLCNACG+ +
Sbjct: 219 ICTHC--ETITTPQWRQGPSGPKTLCNACGVRF 249
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,243,303
Number of Sequences: 539616
Number of extensions: 4496141
Number of successful extensions: 10415
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 10273
Number of HSP's gapped (non-prelim): 177
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)