Query 025413
Match_columns 253
No_of_seqs 188 out of 1177
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 09:46:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025413.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025413hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h8g_A 5'-methylthioadenosine 100.0 4.4E-47 1.5E-51 327.8 27.1 242 11-253 25-267 (267)
2 3bsf_A AT4G34840, nucleosidase 100.0 8E-47 2.7E-51 324.0 24.3 244 9-253 10-254 (254)
3 4g41_A MTA/SAH nucleosidase; m 100.0 4.5E-44 1.5E-48 303.5 26.0 216 10-245 3-234 (236)
4 3eei_A 5-methylthioadenosine n 100.0 2E-42 6.7E-47 292.9 25.2 216 10-245 1-233 (233)
5 3o4v_A MTA/SAH nucleosidase; m 100.0 6.6E-42 2.3E-46 289.8 24.8 215 13-247 3-233 (234)
6 3nm6_B MTA/SAH nucleosidase; h 100.0 1.5E-41 5E-46 287.0 25.9 214 12-245 1-230 (230)
7 3dp9_A MTA/SAH nucleosidase; v 100.0 1.2E-41 4.2E-46 287.7 24.8 212 14-245 2-230 (231)
8 1zos_A 5'-methylthioadenosine 100.0 1.4E-39 4.9E-44 274.6 25.7 212 14-245 2-229 (230)
9 3bl6_A 5'-methylthioadenosine 100.0 1.1E-39 3.9E-44 275.2 24.3 212 14-245 3-230 (230)
10 1je0_A MTAP;, 5'-methylthioade 100.0 7.2E-36 2.5E-40 253.1 19.5 206 12-236 13-232 (236)
11 1odk_A Purine nucleoside phosp 100.0 7.8E-36 2.7E-40 252.8 19.1 209 11-238 12-232 (235)
12 2b94_A Purine nucleoside phosp 100.0 1.7E-35 5.8E-40 255.3 17.6 212 11-245 37-263 (267)
13 1z34_A Purine nucleoside phosp 100.0 2E-33 6.9E-38 238.0 22.6 208 12-238 12-232 (235)
14 3ddo_A Urdpase, upase, uridine 100.0 1.6E-33 5.5E-38 241.1 19.7 181 13-213 19-223 (253)
15 1vhw_A Purine nucleoside phosp 100.0 6E-33 2E-37 237.6 22.4 211 12-241 15-238 (253)
16 3uaw_A PNP, purine nucleoside 100.0 1.4E-32 4.9E-37 232.8 20.2 207 11-236 11-230 (235)
17 3u40_A Pnpase, purine nucleosi 100.0 5E-32 1.7E-36 230.3 21.1 202 12-232 21-235 (242)
18 2a8y_A 5'-methylthioadenosine 100.0 4.7E-32 1.6E-36 233.7 20.3 228 8-247 3-252 (270)
19 1wta_A 5'-methylthioadenosine 100.0 1.2E-31 4.1E-36 231.7 21.1 223 13-247 12-257 (275)
20 1cb0_A Protein (5'-deoxy-5'-me 100.0 1.4E-31 4.8E-36 232.5 21.5 216 13-247 10-260 (283)
21 3mb8_A Purine nucleoside phosp 100.0 2.4E-31 8.1E-36 230.0 19.3 210 12-242 20-247 (279)
22 3phc_A Purine nucleoside phosp 100.0 2E-31 6.8E-36 230.1 17.5 183 12-214 16-211 (275)
23 1ybf_A AMP nucleosidase; struc 100.0 6.5E-31 2.2E-35 226.7 20.3 181 12-217 25-216 (268)
24 3qpb_A Uridine phosphorylase; 100.0 1.3E-31 4.5E-36 232.1 14.1 185 12-216 44-250 (282)
25 3euf_A Uridine phosphorylase 1 100.0 7.4E-30 2.5E-34 224.8 16.8 214 14-245 72-324 (328)
26 3p0f_A Uridine phosphorylase 2 100.0 1.2E-29 4.1E-34 221.1 15.8 213 14-244 43-294 (297)
27 3bje_A Nucleoside phosphorylas 100.0 1.5E-28 5.3E-33 218.1 20.1 187 12-217 42-323 (349)
28 1t8s_A AMP nucleosidase; alpha 100.0 1.9E-28 6.4E-33 224.6 20.0 185 45-245 258-463 (484)
29 2p4s_A Purine nucleoside phosp 100.0 1.5E-26 5.2E-31 205.4 24.3 220 13-247 110-369 (373)
30 3ozb_A Methylthioadenosine pho 100.0 6.8E-27 2.3E-31 199.8 20.3 222 12-243 15-258 (259)
31 1vmk_A Purine nucleoside phosp 99.9 1.8E-26 6.1E-31 198.7 21.4 224 12-244 31-276 (277)
32 3odg_A Xanthosine phosphorylas 99.9 6.4E-26 2.2E-30 196.0 23.3 224 12-245 33-284 (287)
33 1tcv_A Purine-nucleoside phosp 99.9 5.8E-26 2E-30 196.8 21.6 226 12-246 26-285 (287)
34 1g2o_A Purine nucleoside phosp 99.9 9.7E-26 3.3E-30 193.6 21.3 214 12-245 27-268 (268)
35 3fuc_A Purine nucleoside phosp 99.9 1.6E-24 5.3E-29 187.2 23.6 223 12-245 24-282 (284)
36 1qe5_A Pentosyltransferase; en 99.9 5.1E-25 1.7E-29 188.9 19.7 215 12-243 29-265 (266)
37 3khs_A Purine nucleoside phosp 99.9 1.2E-24 4E-29 188.2 21.4 229 12-249 21-283 (285)
38 3la8_A SMU.1229, putative puri 99.9 1.8E-24 6.1E-29 187.2 20.2 223 12-245 55-303 (303)
39 3phb_E Purine nucleoside phosp 99.9 4.8E-24 1.7E-28 186.4 22.5 227 12-247 59-319 (324)
40 2ebj_A Pyrrolidone carboxyl pe 74.7 7.5 0.00026 30.8 6.4 29 79-107 43-71 (192)
41 3giu_A Pyrrolidone-carboxylate 74.5 8.1 0.00028 31.2 6.7 35 80-116 49-83 (215)
42 4gxh_A Pyrrolidone-carboxylate 70.0 11 0.00039 30.3 6.6 27 81-107 50-76 (216)
43 3ot5_A UDP-N-acetylglucosamine 68.6 12 0.0004 32.9 7.0 24 10-33 25-51 (403)
44 4hps_A Pyrrolidone-carboxylate 67.9 13 0.00045 30.3 6.6 27 81-107 71-97 (228)
45 1x10_A Pyrrolidone-carboxylate 67.9 12 0.00042 29.9 6.3 27 81-107 48-74 (208)
46 1a2z_A Pyrrolidone carboxyl pe 67.7 14 0.00047 29.9 6.6 28 80-107 48-75 (220)
47 3dzc_A UDP-N-acetylglucosamine 63.2 19 0.00066 31.4 7.3 25 9-33 22-49 (396)
48 3lac_A Pyrrolidone-carboxylate 61.0 8.2 0.00028 31.2 4.0 27 81-107 49-75 (215)
49 3ro0_A Pyrrolidone-carboxylate 60.7 8.3 0.00028 31.4 4.0 34 81-116 50-83 (223)
50 1iu8_A Pyrrolidone-carboxylate 60.1 8.8 0.0003 30.8 4.0 27 81-107 45-71 (206)
51 1tvm_A PTS system, galactitol- 38.9 94 0.0032 21.8 6.4 48 75-123 31-79 (113)
52 3fwy_A Light-independent proto 35.8 61 0.0021 27.3 5.8 40 54-101 44-83 (314)
53 3dhn_A NAD-dependent epimerase 30.6 1.6E+02 0.0056 22.4 7.2 94 12-107 4-117 (227)
54 1qv9_A F420-dependent methylen 27.0 1.5E+02 0.0051 24.4 6.2 59 57-122 32-101 (283)
55 3o3m_B Beta subunit 2-hydroxya 27.0 1.9E+02 0.0064 25.0 7.5 29 186-216 329-357 (385)
56 2f9y_B Acetyl-coenzyme A carbo 25.6 1.5E+02 0.005 25.0 6.3 58 46-106 106-166 (304)
57 3ug7_A Arsenical pump-driving 23.2 1.2E+02 0.0042 25.7 5.5 31 60-96 27-57 (349)
58 2woj_A ATPase GET3; tail-ancho 22.3 79 0.0027 27.1 4.1 33 73-105 26-61 (354)
59 1w2w_B 5-methylthioribose-1-ph 22.0 42 0.0015 26.3 2.1 29 181-209 66-94 (191)
60 2woo_A ATPase GET3; tail-ancho 21.1 1.1E+02 0.0038 25.7 4.7 26 73-98 27-52 (329)
61 3zq6_A Putative arsenical pump 20.3 1.4E+02 0.0047 25.0 5.2 33 73-105 22-55 (324)
No 1
>2h8g_A 5'-methylthioadenosine nucleosidase; protein-adenine complex, hydrolase; HET: ADE; 1.50A {Arabidopsis thaliana} PDB: 2qsu_A 2qtg_A* 2qtt_A* 3lgs_A*
Probab=100.00 E-value=4.4e-47 Score=327.78 Aligned_cols=242 Identities=73% Similarity=1.136 Sum_probs=214.3
Q ss_pred ccCeEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHH
Q 025413 11 AISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQ 90 (253)
Q Consensus 11 ~~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~ 90 (253)
++++|+||+|++.|++++++.++..+.....++...++.||.|+++|++|+++.+|.++.+....+|+++|+++++++++
T Consensus 25 ~~~~i~II~A~~~E~~~l~~~l~~~~~~~~~~~~~~~~~~~~G~~~g~~Vvv~~~G~~h~~~~~~~G~v~aa~~~~~ll~ 104 (267)
T 2h8g_A 25 PISSVVFVIAMQAEALPLVNKFGLSETTDSPLGKGLPWVLYHGVHKDLRINVVCPGRDAALGIDSVGTVPASLITFASIQ 104 (267)
T ss_dssp CCCEEEEECSCHHHHHHHHHHTTCEECCSCSSCSSCCCEEEEEEETTEEEEEEECCBCTTTCSBCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHHHHHHhccccccccccccCCCcEEEEEEECCEEEEEEECCCccccccCcccHHHHHHHHHHHHH
Confidence 56689999999999999999999876532233224678999999999999999999545554444899999999999999
Q ss_pred HcCCCEEEEEeeeccc-CCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCCCChhhhhcCcceEEEEeecccccc
Q 025413 91 ALKPDLIINAGTAGGF-KAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDM 169 (253)
Q Consensus 91 ~~~~~~vi~~G~aG~l-~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~~~~~l~~~~~~~~G~i~sgd~~~~ 169 (253)
.|+|+.+|++|+|||+ + +++++|||||+++++++|.+...+.|+.|..++.|.|++++|..+++++.|+++|||.|+.
T Consensus 105 ~~~~~~iI~~G~aGgl~~-~~~~~GDvVi~~~~i~~d~~~~~~~f~~~~~~~~p~~~~~~L~~~~~~~~G~i~sgd~f~~ 183 (267)
T 2h8g_A 105 ALKPDIIINAGTCGGFKV-KGANIGDVFLVSDVVFHDRRIPIPMFDLYGVGLRQAFSTPNLLKELNLKIGRLSTGDSLDM 183 (267)
T ss_dssp HHCCSEEEEEEEEEECGG-GTCCTTCEEEEEEEEESSCCCCSTTHHHHHHCCEECCCCHHHHHHHCCEEEEEEECSCSSC
T ss_pred HcCCCEEEEEEeecccCC-CCCCCCCEEEEeeheeccCCCCccccCccccCCCCCCCCHHHHhCCCeEEeeEEECCcccC
Confidence 9999999999999999 7 6999999999999999998765455655767788888788887778899999999999999
Q ss_pred ChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhHhhcccc
Q 025413 170 SSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFINGKR 249 (253)
Q Consensus 170 ~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~aa~~~~~~l~~~l~~~~~~~ 249 (253)
+++.++.+++++++++|||+++++++|+++++||++||+|||++++++.+.++|+++++.+++.+.+.+.++|+.+.+|+
T Consensus 184 ~~~~~~~l~~~ga~~veME~aa~a~va~~~gip~~~Ir~ISD~a~~~~~s~~~~~~~~~~aa~~~~~~l~~~l~~l~~~~ 263 (267)
T 2h8g_A 184 STQDETLIIANDATLKDMEGAAVAYVADLLKIPVVFLKAVTDLVDGDKPTAEEFLQNLTVVTAALEGTATKVINFINGRN 263 (267)
T ss_dssp CHHHHHHHHHTTCSEEESSHHHHHHHHHHTTCCEEEEEEEEEETTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCeEEeccHHHHHHHHHHcCCCEEEEEEEEECccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 88888888888999999999999999999999999999999999987656799999999999999999999999999999
Q ss_pred ccCC
Q 025413 250 FSEL 253 (253)
Q Consensus 250 ~~~~ 253 (253)
+++|
T Consensus 264 ~~~~ 267 (267)
T 2h8g_A 264 LSDL 267 (267)
T ss_dssp GGGC
T ss_pred cccC
Confidence 9998
No 2
>3bsf_A AT4G34840, nucleosidase; alpha-beta, hydrolase; HET: ADE; 2.90A {Arabidopsis thaliana}
Probab=100.00 E-value=8e-47 Score=324.00 Aligned_cols=244 Identities=65% Similarity=1.077 Sum_probs=214.7
Q ss_pred ccccCeEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHH
Q 025413 9 QEAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYAS 88 (253)
Q Consensus 9 ~~~~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~l 88 (253)
.+++++|+||+|++.|++++++.|+..+.....++...++.+|.|+++|++|+++.+|.++.+....+|+++|+++++++
T Consensus 10 ~~~~~~i~II~a~~~E~~~l~~~l~~~~~~~~~~~~~~~~~~~~G~~~g~~V~v~~~G~~h~~~~~~iG~~~aa~~~~~l 89 (254)
T 3bsf_A 10 KRPISTIVFIVAMQKEAQPLINRLRLVEEVNTPFPKEVTWIMFKGMYKDLNINIVCPGKDSTLGVESVGTVPASLVTYAS 89 (254)
T ss_dssp -CBCCEEEEECSCHHHHHHHHHHHTCEEESSCSSCTTSCCEEEEEEETTEEEEEEECCBCTTTCSBCCSHHHHHHHHHHH
T ss_pred CCCCCeEEEEEeCHHHHHHHHHHhcccccccccccCCCCeEEEEEEECCEEEEEEECCCccccccCccCHHHHHHHHHHH
Confidence 46667899999999999999999988766322333346789999999999999999995555544448999999999999
Q ss_pred HHHcCCCEEEEEeeeccc-CCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCCCChhhhhcCcceEEEEeecccc
Q 025413 89 IQALKPDLIINAGTAGGF-KAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSL 167 (253)
Q Consensus 89 i~~~~~~~vi~~G~aG~l-~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~~~~~l~~~~~~~~G~i~sgd~~ 167 (253)
+++|+|+.+|++|+|||+ + +++++|||||+++++++|.+.+.+.|+.|..++.|.|++++|..+++++.|+++|||+|
T Consensus 90 l~~~~~~~iI~~G~aGgl~~-~~~~~GDvvi~~~~~~~d~~~~~~~~~~~~~~~~p~~~~~~L~~~~~~~~G~i~sgd~f 168 (254)
T 3bsf_A 90 ILAIQPDLIINAGTAGGFKA-KGACISDVYVVSTVAFHDRRIPVPVLDIYGVGMRNTFPTPNLIKELNLKVGRLSTGDSM 168 (254)
T ss_dssp HHSSCCSEEEEEEEEEECGG-GTCCTTCEEEEEEEEESSCCCCSTTHHHHHHCCEECCCCHHHHHHTTCEEEEEEECSCS
T ss_pred HHHcCCCEEEEEEeecCcCC-CCCccCCEEEEeeeeeccCCCCccccCcCCCCcCCCCCCHHHHhCCCeEEeeEEECccc
Confidence 999999999999999999 7 69999999999999999987654456556677788888888888899999999999999
Q ss_pred ccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhHhhcc
Q 025413 168 DMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFING 247 (253)
Q Consensus 168 ~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~aa~~~~~~l~~~l~~~~~ 247 (253)
+.+++.++.+++++++++|||+++++++|+++++||++||+|||++++++.+.++|+++++.+++.+.+.+.++++.+.+
T Consensus 169 ~~~~~~~~~~~~~g~~~veME~aa~a~va~~~~ip~~~Ir~ISD~a~~~~~s~~~~~~~~~~a~~~~~~~l~~~l~~l~~ 248 (254)
T 3bsf_A 169 DMSPHDEESITANDATVKDMEGAAVAYVADIFKVPTILIKGVTDIVDGNRPTSEEFLENLAAVTAKLDESLTKVIDFISG 248 (254)
T ss_dssp SCCHHHHHHHHHTTCSEEESSHHHHHHHHHHTTCCEEEEEEEEEETTTTCCSTTTTTSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHcCCcEEECcHHHHHHHHHHcCCCEEEEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99988888888889999999999999999999999999999999999876556899999999999999999999999999
Q ss_pred ccccCC
Q 025413 248 KRFSEL 253 (253)
Q Consensus 248 ~~~~~~ 253 (253)
|++++|
T Consensus 249 ~~~~~~ 254 (254)
T 3bsf_A 249 KCLSDL 254 (254)
T ss_dssp CBTTTC
T ss_pred cCcccC
Confidence 999998
No 3
>4g41_A MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, S-adenosylhomocysteine, cleavag; HET: MTA; 1.45A {Streptococcus pyogenes}
Probab=100.00 E-value=4.5e-44 Score=303.47 Aligned_cols=216 Identities=25% Similarity=0.350 Sum_probs=183.0
Q ss_pred cccCeEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHH
Q 025413 10 EAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASI 89 (253)
Q Consensus 10 ~~~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li 89 (253)
|..++|+|||||+.|++++++.|+..+... ..+++||+|+++|++|+++.+| +|+++|+.++++|+
T Consensus 3 ~~~MkIgII~Al~~E~~~l~~~l~~~~~~~-----~~~~~~~~G~~~g~~Vvv~~~G---------~G~~~aa~~~~~l~ 68 (236)
T 4g41_A 3 MGSMKIGIIAAMEEELSLLLANLLDAQEHQ-----VLSKTYYTGRFGKHELILVQSG---------VGKVMSAMTVAILV 68 (236)
T ss_dssp SCSCEEEEEECCHHHHHHHHHTCEEEEEEE-----ETTEEEEEEEETTEEEEEEECC---------SHHHHHHHHHHHHH
T ss_pred CCCCEEEEEccCHHHHHHHHHhccCCceEe-----cCCcEEEEEEECCEEEEEEeCC---------CCHHHHHHHHHHHH
Confidence 445689999999999999999998877643 4678999999999999999999 99999999999999
Q ss_pred HHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCC-----CChhhh---------hcCc
Q 025413 90 QALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAF-----STPNLL---------RELN 155 (253)
Q Consensus 90 ~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~-----~~~~l~---------~~~~ 155 (253)
++|+|+.+|++|+|||++ +++++|||||++++++||.+... + .|..++.|.. .++.|. .+++
T Consensus 69 ~~~~~~~ii~~G~aGgl~-~~i~~GDvvi~~~~i~~d~~~~~--~-~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 144 (236)
T 4g41_A 69 EHFKAQAIINTGSAGAVA-SHLAIGDVVVADRLVYHDVDATA--F-GYAYGQMAGQPLYYDCDPQFVAIFKQVLKHEKTN 144 (236)
T ss_dssp HTTCCSEEEEEEEECBCS-TTCCTTCEEEEEEEEESSCBCGG--G-TCCTTCCTTSCSSEECCHHHHHHHHHHHHHTTCC
T ss_pred HhCCCCEEEEEeeecCCC-CCCCCCeEEEEeeeEEcCCCCCc--c-CCcCCcCCCCCccccCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999 79999999999999999987542 1 2333443322 244442 3578
Q ss_pred ceEEEEeeccccccChHhHHHHH-hC-CCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCCccHHHHHHHHHHHHHH
Q 025413 156 LKVCKLSTGDSLDMSSQDETSIT-AN-DATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAA 233 (253)
Q Consensus 156 ~~~G~i~sgd~~~~~~~~~~~l~-~~-~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~aa~~ 233 (253)
+|.|+++|+|.|+.+++.+++++ ++ +++++|||++|++++|+++++||++||+|||++++++. ++|+++.+.++++
T Consensus 145 ~~~G~i~S~d~~~~~~~~~~~l~~~~~g~~~veME~aa~~~va~~~~~p~~~Ir~ISD~ad~~~~--~~~~~~~~~Aa~~ 222 (236)
T 4g41_A 145 GQVGLIATGDSFVAGQDKIDQIKTAFSNVLAVEMEGAAIAQAAHTAGKPFIVVRAMSDTAAHDAN--ITFDQFIIEAGKR 222 (236)
T ss_dssp EEEEEEEECSBCCCCHHHHHHHHHHSTTCCEEESSHHHHHHHHHHTTCCEEEEEEESSCTTCCCC--SCHHHHHHHHHHH
T ss_pred eeeceEEecCCcccCHHHHHHHHHHcCCCeEEechHHHHHHHHHHcCCCEEEEEEEEeCCCCcCc--ccHHHHHHHHHHH
Confidence 99999999999999999888887 54 99999999999999999999999999999999998875 4566666667777
Q ss_pred HHHHHHHHhHhh
Q 025413 234 LEQSVSQVIDFI 245 (253)
Q Consensus 234 ~~~~l~~~l~~~ 245 (253)
..+.++++|+.|
T Consensus 223 ~a~~v~~~l~~l 234 (236)
T 4g41_A 223 SAQILMTFLENL 234 (236)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHHHc
Confidence 777788888765
No 4
>3eei_A 5-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN; HET: MTM; 1.78A {Neisseria meningitidis serogroup B} SCOP: c.56.2.1
Probab=100.00 E-value=2e-42 Score=292.94 Aligned_cols=216 Identities=25% Similarity=0.364 Sum_probs=184.4
Q ss_pred cccCeEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHH
Q 025413 10 EAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASI 89 (253)
Q Consensus 10 ~~~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li 89 (253)
|++++|+||+||+.|++++++.++..+... .+++++|+|+++|++|+++.+| +|+++|+.++++|+
T Consensus 1 m~~~~i~ii~A~~~E~~~l~~~l~~~~~~~-----~~~~~~~~G~~~g~~v~v~~~G---------~G~~~aa~~~~~li 66 (233)
T 3eei_A 1 MSLKTVAVIGAMEQEIELLREMMENVKAVS-----FGRFSAYEGELAGKRMVLALSG---------IGKVNAAVATAWII 66 (233)
T ss_dssp --CCEEEEEESSHHHHHHHHHHCEEEEEEE-----ETTEEEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHH
T ss_pred CCCCEEEEEecCHHHHHHHHHHhcccceee-----eCCeEEEEEEECCEEEEEEECC---------CCHHHHHHHHHHHH
Confidence 456789999999999999999999876542 4689999999999999999999 99999999999999
Q ss_pred HHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCC-----CChhhh---------hcCc
Q 025413 90 QALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAF-----STPNLL---------RELN 155 (253)
Q Consensus 90 ~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~-----~~~~l~---------~~~~ 155 (253)
+.++|+.||++|+|||++ +++++||+||+++++++|.+.. .| .|..++.|.+ ++++|. .+++
T Consensus 67 ~~~~~~~iI~~G~aG~l~-~~~~~GDvvv~~~~~~~d~~~~--~~-g~~~~~~p~~~~~~~~d~~l~~~~~~~~~~~~~~ 142 (233)
T 3eei_A 67 REFAADCVINTGSAGGLG-KGLKVGDVVIGTETAHHDVDVT--AF-GYAWGQVPQLPARFASDGILIEAAKRAARTFEGA 142 (233)
T ss_dssp HHHCCSEEEECCEEEECS-TTCCTTCEEEEEEEEESSCBCG--GG-TCCTTCCTTSCSSEECCHHHHHHHHHHHHTCCSS
T ss_pred HhCCCCEEEEEEEeecCC-CCCccccEEEEceEEEccCCcc--cc-CCcCCCCCCCCccccCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999 7999999999999999997643 22 2344444432 245543 1456
Q ss_pred -ceEEEEeeccccccChHhHHHHH-hC-CCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCCccHHHHHHHHHHHHH
Q 025413 156 -LKVCKLSTGDSLDMSSQDETSIT-AN-DATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTA 232 (253)
Q Consensus 156 -~~~G~i~sgd~~~~~~~~~~~l~-~~-~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~aa~ 232 (253)
++.|+++|+|.|+.+++.++.++ ++ |++++|||+++++++|+++++||++||+|||++++++. ++|.++...+++
T Consensus 143 ~~~~G~~~sgd~f~~~~~~~~~l~~~~~ga~~veME~aa~a~~a~~~gip~~~ir~IsD~a~~~~~--~~~~~~~~~aa~ 220 (233)
T 3eei_A 143 AVEQGLIVSGDRFVHSSEGVAEIRKHFPEVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKAD--ISFDEFLKTAAA 220 (233)
T ss_dssp CEEEEEEEECSBCCCSHHHHHHHHHHCTTEEEEESSHHHHHHHHHHTTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHH
T ss_pred cEEEEEEEEcceeeCCHHHHHHHHHHcCCceEEechHHHHHHHHHHcCCCEEEEEEEecCCCCcch--hhHHHHHHHHHH
Confidence 99999999999999988888887 46 99999999999999999999999999999999988754 678888888888
Q ss_pred HHHHHHHHHhHhh
Q 025413 233 ALEQSVSQVIDFI 245 (253)
Q Consensus 233 ~~~~~l~~~l~~~ 245 (253)
+..+.+.++|+.+
T Consensus 221 ~~~~~v~~~l~~l 233 (233)
T 3eei_A 221 NSAKMVAEIVKSL 233 (233)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 8889999888764
No 5
>3o4v_A MTA/SAH nucleosidase; mixed alpha/beta dimer, hydrolase; HET: 4CT; 1.75A {Escherichia coli} SCOP: c.56.2.1 PDB: 1jys_A* 1nc1_A* 1nc3_A* 1y6q_A* 1y6r_A* 1z5p_A* 3df9_A* 1z5n_A* 1z5o_A* 4g89_A*
Probab=100.00 E-value=6.6e-42 Score=289.85 Aligned_cols=215 Identities=26% Similarity=0.371 Sum_probs=184.4
Q ss_pred CeEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHHHc
Q 025413 13 SSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQAL 92 (253)
Q Consensus 13 ~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~~ 92 (253)
++|+||+||+.|++++++.++..+... .+++++|+|+++|++|+++.+| +|+++|++++++|++.+
T Consensus 3 m~i~ii~A~~~E~~~l~~~l~~~~~~~-----~~~~~~~~G~~~g~~v~v~~~G---------iG~~~aa~~~~~li~~~ 68 (234)
T 3o4v_A 3 MKIGIIGAMEEEVTLLRDKIENRQTIS-----LGGCEIYTGQLNGTEVALLKSG---------IGKVAAALGATLLLEHC 68 (234)
T ss_dssp CEEEEEESSHHHHHHHHTTCEEEEEEE-----ETTEEEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCHHHHHHHHHHhccCceEe-----eCCeEEEEEEECCEEEEEEECC---------CCHHHHHHHHHHHHHhC
Confidence 479999999999999999999877643 4689999999999999999999 99999999999999999
Q ss_pred CCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCC-----CChhhh---------hcCcceE
Q 025413 93 KPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAF-----STPNLL---------RELNLKV 158 (253)
Q Consensus 93 ~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~-----~~~~l~---------~~~~~~~ 158 (253)
+|+.||++|+|||++ +++++||+|++++++++|.+.. .| .|..++.|.. .|++|. .+++++.
T Consensus 69 ~~~~iI~~G~aG~l~-~~~~~GDvvi~~~~~~~d~~~~--~~-~~~~g~~p~~~~~~~~d~~L~~~~~~~~~~~~~~~~~ 144 (234)
T 3o4v_A 69 KPDVIINTGSAGGLA-PTLKVGDIVVSDEARYHDADVT--AF-GYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVR 144 (234)
T ss_dssp CCSEEEEEEEEEECS-TTCCTTCEEEEEEEEESSCBCG--GG-TCCTTCCTTSCSSEECCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEEEEeccC-CCCCCCcEEEECeEEEcccCCc--cc-CCccCcCCCCCccccCCHHHHHHHHHHHHhcCCCeEE
Confidence 999999999999999 7999999999999999997543 23 2444554432 245553 2478999
Q ss_pred EEEeeccccccChHhHHHHHh-C-CCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCCccHHHHHHHHHHHHHHHHH
Q 025413 159 CKLSTGDSLDMSSQDETSITA-N-DATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQ 236 (253)
Q Consensus 159 G~i~sgd~~~~~~~~~~~l~~-~-~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~aa~~~~~ 236 (253)
|.++|||.|+.+++.++.+++ + +++++|||+++++++|+++++||++||+|||++++++. ++|.++...++++..+
T Consensus 145 G~~~sgd~f~~~~~~~~~l~~~~~ga~~veME~aa~a~va~~~~ip~~~ir~ISD~a~~~~~--~~~~~~~~~aa~~~a~ 222 (234)
T 3o4v_A 145 GLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSH--LSFDEFLAVAAKQSSL 222 (234)
T ss_dssp EEEEECSBCCCSHHHHHHHHHHCTTEEEEESSHHHHHHHHHHHTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHHHHHH
T ss_pred eeEEEcCeeeCCHHHHHHHHHHcCCccEeehhHHHHHHHHHHhCCCEEEEEEEecCCCCcch--hhHHHHHHHHHHHHHH
Confidence 999999999999888888886 4 99999999999999999999999999999999988754 6677777778888888
Q ss_pred HHHHHhHhhcc
Q 025413 237 SVSQVIDFING 247 (253)
Q Consensus 237 ~l~~~l~~~~~ 247 (253)
.+.++|+.++.
T Consensus 223 ~v~~~l~~l~~ 233 (234)
T 3o4v_A 223 MVESLVQKLAH 233 (234)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcC
Confidence 88888887753
No 6
>3nm6_B MTA/SAH nucleosidase; hydrolase; HET: ADE; 1.60A {Helicobacter pylori} SCOP: c.56.2.0 PDB: 3nm5_A* 3nm4_A* 4ffs_A*
Probab=100.00 E-value=1.5e-41 Score=286.98 Aligned_cols=214 Identities=21% Similarity=0.306 Sum_probs=181.3
Q ss_pred cCeEEEEEcchHhHHHHHH-hcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVN-KFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQ 90 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~-~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~ 90 (253)
|++|+||+||+.|++++++ .++..+.. ..+++.+|+|+++|++|+++.+| +|+++|+.++++|++
T Consensus 1 m~~I~Ii~A~~~E~~~l~~~~l~~~~~~-----~~~~~~~~~G~~~g~~v~v~~~G---------~G~~~aa~~~~~l~~ 66 (230)
T 3nm6_B 1 MQKIGILGAMREEITPILELFGVDFEEI-----PLGGNVFHKGVYHNKEIIVAYSK---------IGKVHSTLTTTSMIL 66 (230)
T ss_dssp -CEEEEEESSHHHHHHHHHHHCCCCEEE-----EETTEEEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHHH
T ss_pred CcEEEEEeeCHHHHHHHHHHhcccccEE-----EECCEEEEEEEECCEEEEEEECC---------CCHHHHHHHHHHHHH
Confidence 3689999999999999999 99886653 35789999999999999999999 999999999999999
Q ss_pred HcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCC-----CChhhh---------hcCcc
Q 025413 91 ALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAF-----STPNLL---------RELNL 156 (253)
Q Consensus 91 ~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~-----~~~~l~---------~~~~~ 156 (253)
.++|+.+|++|+|||++ +++++||+|++++++++|.+.. .| .|..++.|.+ ++++|. .++++
T Consensus 67 ~~~~~~iI~~G~aG~l~-~~~~~Gdvvi~~~~~~~d~~~~--~~-g~~~g~~p~~~~~~~~d~~l~~~~~~~~~~~~~~~ 142 (230)
T 3nm6_B 67 AFGVQKVLFSGVAGSLV-KDLKINDLLVATQLVQHDVDLS--AF-DHPLGFIPESAIFIETSGSLNALAKKIANEQHIAL 142 (230)
T ss_dssp HHCCSEEEEEEEEEECS-TTCCTTCEEEEEEEEETTCCCG--GG-TCCTTCCTTSCSEEECCHHHHHHHHHHHHHTTCCE
T ss_pred hCCCCEEEEEEeecCCC-CCCccccEEEEeeEEEccCCCc--cc-CCCCCCCCCCCccccCCHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999 7999999999999999997643 12 2333444432 245553 25789
Q ss_pred eEEEEeeccccccChHhHHHHHh-CCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCCccHHHHHHHHHHHHHHHH
Q 025413 157 KVCKLSTGDSLDMSSQDETSITA-NDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALE 235 (253)
Q Consensus 157 ~~G~i~sgd~~~~~~~~~~~l~~-~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~aa~~~~ 235 (253)
+.|+++|||.|+.+++.++.+++ +|++++|||+++++++|+++++||++||+|||++++++. .+|.++.+.+++...
T Consensus 143 ~~G~~~sgd~f~~~~~~~~~l~~~~ga~~veME~aa~a~~a~~~gi~~~~ir~IsD~a~~~~~--~~~~~~~~~a~~~~~ 220 (230)
T 3nm6_B 143 KEGVIASGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAG--MSFDEFLEKSAHTSA 220 (230)
T ss_dssp EEEEEEECSSCCCCHHHHHHHHHHHCCSEEESSHHHHHHHHHHHTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHHHHH
T ss_pred EEEEEEECChhcCCHHHHHHHHHHcCCcEEeccHHHHHHHHHHcCCCEEEEEEEecCCCCCCc--cCHHHHHHHHHHHHH
Confidence 99999999999999988888875 799999999999999999999999999999999988653 567777777777777
Q ss_pred HHHHHHhHhh
Q 025413 236 QSVSQVIDFI 245 (253)
Q Consensus 236 ~~l~~~l~~~ 245 (253)
+.+.++|+.+
T Consensus 221 ~~~~~~l~~l 230 (230)
T 3nm6_B 221 KFLKSMVDEL 230 (230)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHhC
Confidence 7788887653
No 7
>3dp9_A MTA/SAH nucleosidase; vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocystei nucleosidase, butylthio dadme immucillin A, MTAN, hydrolase; HET: BIG; 2.30A {Vibrio cholerae} SCOP: c.56.2.1
Probab=100.00 E-value=1.2e-41 Score=287.71 Aligned_cols=212 Identities=27% Similarity=0.435 Sum_probs=180.7
Q ss_pred eEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHHHcC
Q 025413 14 SVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALK 93 (253)
Q Consensus 14 ~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~~~ 93 (253)
+|+||+||+.|++++++.++..+.. ..+++++|+|+++|++|+++.+| +|+++|++++++|++.++
T Consensus 2 ~i~Ii~A~~~E~~~l~~~l~~~~~~-----~~~~~~~~~G~~~g~~v~v~~~G---------iG~~~aa~~~~~li~~~~ 67 (231)
T 3dp9_A 2 KIGIIGAMQQEVAILKDLIEDVQEV-----NQAGCTFYSGQIQGVDVVLLQSG---------IGKVSAALGTALLISQYA 67 (231)
T ss_dssp CEEEEESSHHHHHHHHTTCEEEEEE-----EETTEEEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHHHHHC
T ss_pred EEEEEeeCHHHHHHHHHHhccccee-----eeCCeEEEEEEECCEEEEEEECC---------CCHHHHHHHHHHHHHhcC
Confidence 6999999999999999999886654 24689999999999999999999 999999999999999999
Q ss_pred CCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCC-----CChhhh-------h---cCcceE
Q 025413 94 PDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAF-----STPNLL-------R---ELNLKV 158 (253)
Q Consensus 94 ~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~-----~~~~l~-------~---~~~~~~ 158 (253)
|+.||++|+|||++ +++++||+||+++++++|.+.. .| .|..++.|.. .+++|. + +++++.
T Consensus 68 ~~~iI~~G~aG~l~-~~~~~GDvvi~~~~~~~d~~~~--~~-g~~~g~~p~~~~~~~~d~~L~~~~~~~~~~~~~~~~~~ 143 (231)
T 3dp9_A 68 PDVVINTGSAGGFD-ASLNVGDVVISSEVRHHDADVT--AF-GYEIGQMAGQPAAFKADEKLMTVAEQALAQLPNTHAVR 143 (231)
T ss_dssp CSEEEEEEEEEECS-TTCCTTCEEEEEEEEETTCBCG--GG-TCCTTCCTTSCSSEECCHHHHHHHHHHHTTSTTCCEEE
T ss_pred CCEEEEEEEeeccC-CCCcCCCEEEEeeEEEccCCCC--cc-CCcCCcCCCCCceecCCHHHHHHHHHHHHhcCCCceEE
Confidence 99999999999999 7999999999999999997643 22 2444444321 245543 1 468999
Q ss_pred EEEeeccccccChHhHHHHH-hC-CCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCCccHHHHHHHHHHHHHHHHH
Q 025413 159 CKLSTGDSLDMSSQDETSIT-AN-DATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQ 236 (253)
Q Consensus 159 G~i~sgd~~~~~~~~~~~l~-~~-~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~aa~~~~~ 236 (253)
|.++|||.|+.+++.++.++ ++ |++++|||+++++++|+++++||++||+|||++++++. .+|.++...++.+..+
T Consensus 144 G~~~sgd~f~~~~~~~~~l~~~~~g~~~veME~aa~a~~a~~~~ip~~~ir~ISD~a~~~~~--~~~~~~~~~aa~~~a~ 221 (231)
T 3dp9_A 144 GLICTGDAFVCTAERQQFIRQHFPSVVAVEMEASAIAQTCHQFKVPFVVVRAISDVADKESP--LSFEEFLPLAAKSSSA 221 (231)
T ss_dssp EEEEECSBCCCSHHHHHHHHHHCTTEEEEESSHHHHHHHHHHHTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHHHHHH
T ss_pred EEEEECCeeeCCHHHHHHHHHhcCCCcEEechHHHHHHHHHHcCCCEEEEEEEecCCCCccc--ccHHHHHHHHHHHHHH
Confidence 99999999999988888887 57 99999999999999999999999999999999988754 5677777777777788
Q ss_pred HHHHHhHhh
Q 025413 237 SVSQVIDFI 245 (253)
Q Consensus 237 ~l~~~l~~~ 245 (253)
.+.++|+.+
T Consensus 222 ~v~~~l~~l 230 (231)
T 3dp9_A 222 MVLKMVELL 230 (231)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 888888765
No 8
>1zos_A 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase; transition state, inhibitor, hydrolase; HET: MTM; 1.60A {Streptococcus pneumoniae R6} PDB: 3mms_A*
Probab=100.00 E-value=1.4e-39 Score=274.58 Aligned_cols=212 Identities=23% Similarity=0.358 Sum_probs=183.0
Q ss_pred eEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHHHcC
Q 025413 14 SVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALK 93 (253)
Q Consensus 14 ~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~~~ 93 (253)
+|+||+|++.|++++.+.|+..+.. ..+++.+|.|+++|++|+++.+| +|+++|+.+++.|++.++
T Consensus 2 ~i~Ii~a~~~E~~~~~~~l~~~~~~-----~~~~~~~~~G~~~g~~V~~~~~G---------~G~~~aa~~~~~l~~~~~ 67 (230)
T 1zos_A 2 KIGIIAAMPEELAYLVQHLDNTQEQ-----VVLGNTYHTGTIASHEVVLVESG---------IGKVMSAMSVAILADHFQ 67 (230)
T ss_dssp EEEEEESSGGGTHHHHHTCEEEEEE-----EETTEEEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHHHHHC
T ss_pred eEEEEecCHHHHHHHHHHhccccee-----ecCCeEEEEEEECCEEEEEEECC---------CCHHHHHHHHHHHHHhcC
Confidence 6999999999999999999886643 24678999999999999999999 999999999999999899
Q ss_pred CCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCC-----CChhhh---------hcCcceEE
Q 025413 94 PDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAF-----STPNLL---------RELNLKVC 159 (253)
Q Consensus 94 ~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~-----~~~~l~---------~~~~~~~G 159 (253)
|+.+|++|+|||++ +++++||+|++++++++|.+.. .| .|..++.|.+ ++++|. .+++++.|
T Consensus 68 ~~~ii~~G~aG~l~-~~~~~Gdvvv~~~~~~~d~~~~--~~-g~~~g~~p~~~~~~~~d~~l~~~~~~~~~~~~~~~~~G 143 (230)
T 1zos_A 68 VDALINTGSAGAVA-EGIAVGDVVIADKLAYHDVDVT--AF-GYAYGQMAQQPLYFESDKTFVAQIQESLSQLDQNWHLG 143 (230)
T ss_dssp CSEEEEEEEEEECS-TTCCTTCEEEEEEEEESSCBCG--GG-TCCTTCCTTSCSCEECCHHHHHHHHHTSCTTCCSEEEE
T ss_pred CCEEEEEEEecCCC-CCCccCCEEEEeeeEEcCCCCC--cc-CCcCCCCCCCCCcccCCHHHHHHHHHHHHhcCCcEEEe
Confidence 99999999999999 7999999999999999998643 13 2444554432 245553 14689999
Q ss_pred EEeeccccccChHhHHHHH-hC-CCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCCccHHHHHHHHHHHHHHHHHH
Q 025413 160 KLSTGDSLDMSSQDETSIT-AN-DATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQS 237 (253)
Q Consensus 160 ~i~sgd~~~~~~~~~~~l~-~~-~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~aa~~~~~~ 237 (253)
.++|+|.|+.+.+.++.+. ++ |++++|||+++++++|+++++||++||+|||++++++ .++|+++++.+++.+.+.
T Consensus 144 ~~~sgd~f~~~~~~~~~l~~~~~g~~~veME~aa~~~~a~~~~~~~~~ir~IsD~~~~~~--~~~~~~~~~~aa~~~~~~ 221 (230)
T 1zos_A 144 LIATGDSFVAGNDKIEAIKSHFPEVLAVEMEGAAIAQAAHTLNLPVLVIRAMSDNANHEA--NIFFDEFIIEAGRRSAQV 221 (230)
T ss_dssp EEEECSBCCCSHHHHHHHHHHCTTEEEEESSHHHHHHHHHHTTCCEEEEEEEEECSSTTH--HHHHHHHHHHHHHHHHHH
T ss_pred eEEECCcccCCHHHHHHHHHhCCCCcEehhhHHHHHHHHHHcCCCEEEEEEeccCCCCcc--hhhHHHHHHHHHHHHHHH
Confidence 9999999999988777775 57 9999999999999999999999999999999998864 478888888899999999
Q ss_pred HHHHhHhh
Q 025413 238 VSQVIDFI 245 (253)
Q Consensus 238 l~~~l~~~ 245 (253)
+.++|+.+
T Consensus 222 ~~~~l~~l 229 (230)
T 1zos_A 222 LLAFLKAL 229 (230)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99998865
No 9
>3bl6_A 5'-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN, alpha and beta proteins, hydrolase; HET: FMC; 1.70A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-39 Score=275.20 Aligned_cols=212 Identities=32% Similarity=0.453 Sum_probs=181.3
Q ss_pred eEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHHHcC
Q 025413 14 SVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALK 93 (253)
Q Consensus 14 ~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~~~ 93 (253)
+|+||+|++.|++++++.|+..+.. ..+++.+|.|+++|++|+++.+| +|+++|+.++++|++.|+
T Consensus 3 ~i~ii~a~~~E~~~~~~~l~~~~~~-----~~~~~~~~~G~~~g~~V~~~~~G---------~G~~~aa~~~~~l~~~~~ 68 (230)
T 3bl6_A 3 MIGIIGAMEEEVTILKNKLTQLSEI-----SVAHVKFYTGILKDREVVITQSG---------IGKVNAAISTTLLINKFK 68 (230)
T ss_dssp EEEEEESSHHHHHHHHTTCEEEEEE-----EETTEEEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHHHHHC
T ss_pred EEEEEecCHHHHHHHHHHhccccee-----eeCCeEEEEEEECCEEEEEEECC---------CCHHHHHHHHHHHHHhcC
Confidence 6999999999999999999886543 24578999999999999999999 999999999999999999
Q ss_pred CCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCC-----CChhhh---------hcCcceEE
Q 025413 94 PDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAF-----STPNLL---------RELNLKVC 159 (253)
Q Consensus 94 ~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~-----~~~~l~---------~~~~~~~G 159 (253)
++.+|++|+|||++ +++++||+||+++++++|.+.. .| .|..++.|.+ ++++|. .++++|.|
T Consensus 69 ~~~ii~~G~aG~l~-~~~~~Gdvvv~~~~~~~d~~~~--~~-g~~~g~~p~~~~~~~~d~~l~~~~~~~~~~~~~~~~~G 144 (230)
T 3bl6_A 69 PDVIINTGSAGALD-ESLNVGDVLISDDVKYHDADAT--AF-GYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVG 144 (230)
T ss_dssp CSEEEECSEEEECS-TTCCTTCEEEEEEEEESSCCCG--GG-TCCTTCCTTSCSSEECCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEEEEEcCCC-CCCccCCEEEECeeEEccCCCc--cc-CCcCCcCCCCCccccCCHHHHHHHHHHHHhcCCCeEEe
Confidence 99999999999999 7999999999999999997642 12 2444444432 244443 25789999
Q ss_pred EEeeccccccChHhHHHHH-hC-CCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCCccHHHHHHHHHHHHHHHHHH
Q 025413 160 KLSTGDSLDMSSQDETSIT-AN-DATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQS 237 (253)
Q Consensus 160 ~i~sgd~~~~~~~~~~~l~-~~-~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~aa~~~~~~ 237 (253)
.++|||.|+.+++.++++. ++ |++++|||+++++++|+++++||++||+|||++++++ ..+|.++++.+++++.+.
T Consensus 145 ~~~sgd~f~~~~~~~~~l~~~~~g~~~veME~a~~~~~a~~~~~~~~~ir~IsD~~~~~~--~~~~~~~~~~aa~~~~~~ 222 (230)
T 3bl6_A 145 LIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEA--EMSFEAFLEKAAVSSSQT 222 (230)
T ss_dssp EEEECSSCCCSHHHHHHHHHHCTTEEEEESSHHHHHHHHHHHTCCEEEEEEEEECSSTTH--HHHHHHHHHHHHHHHHHH
T ss_pred eEeEcchhhCCHHHHHHHHHhCCCcEEEEchHHHHHHHHHHcCCCEEEEEEeccCCCCcc--hhhHHHHHHHHHHHHHHH
Confidence 9999999999988777665 67 9999999999999999999999999999999998765 377888888889999999
Q ss_pred HHHHhHhh
Q 025413 238 VSQVIDFI 245 (253)
Q Consensus 238 l~~~l~~~ 245 (253)
+.++|+.+
T Consensus 223 ~~~~l~~~ 230 (230)
T 3bl6_A 223 VEALVSQL 230 (230)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhhC
Confidence 99988753
No 10
>1je0_A MTAP;, 5'-methylthioadenosine phosphorylase; alpha-beta protein, transferase; 1.60A {Sulfolobus solfataricus} SCOP: c.56.2.1 PDB: 1jdt_A* 1jdu_A 1jdv_A* 1jdz_A* 1jds_A 1je1_A* 1jp7_A 1jpv_A
Probab=100.00 E-value=7.2e-36 Score=253.10 Aligned_cols=206 Identities=17% Similarity=0.223 Sum_probs=164.5
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQA 91 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~ 91 (253)
+.+++|+++++.|++++.+.|+..+... ..+++.+|+|+++|++|+++.+| +|+++|+.+++.|++
T Consensus 13 ~a~~vii~g~p~e~~~l~~~l~~~~~~~----~~~~~~~~~G~~~g~~V~v~~~G---------~G~~~aa~~~~~l~~- 78 (236)
T 1je0_A 13 VAERVLVVGDPGRARLLSTLLQNPKLTN----ENRGFLVYTGKYNGETVSIATHG---------IGGPSIAIVLEELAM- 78 (236)
T ss_dssp SCSEEEEESCHHHHHHHGGGSEEEEEEE----CGGGCCEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHHH-
T ss_pred cCCEEEECCCHHHHHHHHHhcccCceee----ccCCeEEEEEEECCEEEEEEecC---------CCHhHHHHHHHHHHH-
Confidence 4489999999999999999998766432 23578999999999999999999 999999999999988
Q ss_pred cCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCC--ccCCCCChhhh---------hcCcceEEE
Q 025413 92 LKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVG--QRQAFSTPNLL---------RELNLKVCK 160 (253)
Q Consensus 92 ~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~--~~p~~~~~~l~---------~~~~~~~G~ 160 (253)
++++.+|++|+|||++ +++++||+||+++++++|.+. |..|..+ ..|..++++|. .+++++.|.
T Consensus 79 ~~~~~iI~~G~aGgl~-~~~~~GDvvi~~~~~~~d~~~----~~~~~p~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~G~ 153 (236)
T 1je0_A 79 LGANVFIRYGTTGALV-PYINLGEYIIVTGASYNQGGL----FYQYLRDNACVASTPDFELTNKLVTSFSKRNLKYYVGN 153 (236)
T ss_dssp TTCCEEEEEEEEEECS-TTCCTTCEEEEEEEEBCCSHH----HHHHHSSCCBCCCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCEEEEEeccccCC-CCCCCCCEEEEhhhccCCCCc----cccccCCCCCCCCCCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 9999999999999999 799999999999999998762 2223222 12322355543 257899999
Q ss_pred EeeccccccChHhH-HHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC-CC-ccHHHHHHHHHHHHHHHHH
Q 025413 161 LSTGDSLDMSSQDE-TSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG-DK-PTAEEFMQNLVAVTAALEQ 236 (253)
Q Consensus 161 i~sgd~~~~~~~~~-~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~-~~-~~~~~~~~~~~~aa~~~~~ 236 (253)
++|+|.|+.+.+.+ +.++++|++++|||+++++++|+++++||++||+|||++++ .. .+++++++...+..+..++
T Consensus 154 ~~s~d~f~~~~~~~~~~~~~~g~~~veME~aa~~~~a~~~gi~~~~ir~IsD~~~~~~~~~~~~~~~~~~~~~~~~aL~ 232 (236)
T 1je0_A 154 VFSSDAFYAEDEEFVKKWSSRGNIAVEMECATLFTLSKVKGWKSATVLVVSDNLAKGGIWITKEELEKSVMDGAKAVLD 232 (236)
T ss_dssp EEECSCTTCCCTTHHHHHHTTTEEEEESSHHHHHHHHHHHTCEEEEEEEEEEECC--------CHHHHHHHHHHHHHHH
T ss_pred EEecCcCccCCHHHHHHHHHcCCeEEeccHHHHHHHHHHcCCcEEEEEEEEcccccCCccCCHHHHHHHHHHHHHHHHH
Confidence 99999999886544 44556899999999999999999999999999999999987 33 4677777766665544443
No 11
>1odk_A Purine nucleoside phosphorylase; alpha-beta protein, transferase, riken structural genomics/proteomics initiative, RSGI; 1.9A {Thermus thermophilus} SCOP: c.56.2.1 PDB: 1odj_A* 1odi_A 1odl_A
Probab=100.00 E-value=7.8e-36 Score=252.78 Aligned_cols=209 Identities=15% Similarity=0.198 Sum_probs=166.8
Q ss_pred ccCeEEEEEcchHhHHHHHHh-cCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHH
Q 025413 11 AISSVVIIIAMQTEAMPLVNK-FELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASI 89 (253)
Q Consensus 11 ~~~~i~Ii~Al~~E~~~~~~~-l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li 89 (253)
.+.+++|+++++.|++++.+. |+..+... ..+++.+|+|+++|++|+++.+| +|+++|+.+++.|+
T Consensus 12 ~i~~~~ii~g~~~e~~~l~~~~l~~~~~~~----~~~~~~~~~G~~~g~~V~v~~~G---------~G~~~aa~~~~~l~ 78 (235)
T 1odk_A 12 DVAERVLLPGDPGRAEWIAKTFLQNPRRYN----DHRGLWGYTGLYKGVPVSVQTTG---------MGTPSAAIVVEELV 78 (235)
T ss_dssp GSCSEEEECSCHHHHHHHHHHHCEEEEEEE----CGGGCCEEEEEETTEEEEEECCC---------SSHHHHHHHHHHHH
T ss_pred ccCCeEEEcCCHHHHHHHHHHHhccchhhh----hcCCeEEEEEEECCEEEEEEecC---------CCHHHHHHHHHHHH
Confidence 355899999999999999998 87765432 23678999999999999999999 99999999999999
Q ss_pred HHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCCCChhhh---------hcCcceEEE
Q 025413 90 QALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCK 160 (253)
Q Consensus 90 ~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~~~~~l~---------~~~~~~~G~ 160 (253)
. ++|+.+|++|+|||++ +++++||+||+++++++|.... + .|.....|..++++|. .+++++.|.
T Consensus 79 ~-~~~~~iI~~G~aG~l~-~~~~~GDvvv~~~~~~~dg~~~---~-~~~~~~~~~~~d~~L~~~~~~~~~~~~~~~~~G~ 152 (235)
T 1odk_A 79 R-LGARVLVRVGTAGAAS-SDLAPGELIVAQGAVPLDGTTR---Q-YLEGRPYAPVPDPEVFRALWRRAEALGYPHRVGL 152 (235)
T ss_dssp H-TTCCEEEEEEEEEESS-TTSCTTCEEEEEEEEEESHHHH---H-HHTTCCCCCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred H-CCCCEEEEEeccccCC-CCCCCCCEEEEchhhccCCCCc---c-ccCCCCCCCcCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 8 9999999999999999 6999999999999999986211 1 1211122322355543 257899999
Q ss_pred EeeccccccChHhHHHH-HhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCCc-cHHHHHHHHHHHHHHHHHHH
Q 025413 161 LSTGDSLDMSSQDETSI-TANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKP-TAEEFMQNLVAVTAALEQSV 238 (253)
Q Consensus 161 i~sgd~~~~~~~~~~~l-~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~-~~~~~~~~~~~aa~~~~~~l 238 (253)
++|+|.|+.+++.+.++ +++|++++|||+++++++|+++++||++||+|||++++.++ +.+++++...+..+...+.+
T Consensus 153 ~~s~d~f~~~~~~~~~~~~~~g~~~veME~aa~~~~a~~~gip~~~ir~IsD~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 232 (235)
T 1odk_A 153 VASEDAFYATTPEEARAWARYGVLAFEMEASALFLLGRMRGVRTGAILAVSNRIGDPELAPPEVLQEGVRRMVEVALEAV 232 (235)
T ss_dssp EEEESCTTTCCHHHHHHHHTTTEEEEESSHHHHHHHHHHHTCEEEEEEEEEEEC------CHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHcCCcEEeccHHHHHHHHHHcCCCEEEEEEEecCcccCccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999987655554 46899999999999999999999999999999999987543 66778777777766665544
No 12
>2b94_A Purine nucleoside phosphorylase; SGPP, structural genomics, PSI, protein structure initiative UDP, ontario/toronto SGC; 1.85A {Plasmodium knowlesi} PDB: 3emv_A 1sq6_A 2bsx_A* 3enz_A*
Probab=100.00 E-value=1.7e-35 Score=255.29 Aligned_cols=212 Identities=14% Similarity=0.085 Sum_probs=163.5
Q ss_pred ccCeEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHH
Q 025413 11 AISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQ 90 (253)
Q Consensus 11 ~~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~ 90 (253)
.+.+++||+|++.|++++.+.|+..+... ..+++.+|+|+++|++|+++.+| +|+++|+++++.|+
T Consensus 37 ~i~~i~Ii~a~~~e~~~l~~~l~~~~~~~----~~~~~~~~~G~~~g~~V~v~~~G---------iG~~~aa~~~~~L~- 102 (267)
T 2b94_A 37 QTTPVVLVVGDPGRVDKVKMLCDSYVDLA----YNREYKSVECTYKGQKFLCVSHG---------VGSAGCAICFEELM- 102 (267)
T ss_dssp GCCSEEEECSSHHHHHHHHHTSSEEEECC-------CEEEEEEEETTEEEEEEEEC---------TTCSCSHHHHHHHH-
T ss_pred hCCCEEEECCCHHHHHHHHHHhccceEee----ecCCeEEEEEEECCEEEEEEeCC---------CCHHHHHHHHHHHH-
Confidence 34589999999999999999998776543 23568999999999999999999 99999999999998
Q ss_pred HcCCCEEEEEeeecccCCCC-CCcccEEEeccceeccCCCCCCCccccCCCccCCCCChhhh---------hcCcceEEE
Q 025413 91 ALKPDLIINAGTAGGFKAKG-ASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCK 160 (253)
Q Consensus 91 ~~~~~~vi~~G~aG~l~~~~-~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~~~~~l~---------~~~~~~~G~ 160 (253)
.++|+.+|++|+|||++ ++ +++|||||+++++++|.... .|.....|..++++|. .+++++.|.
T Consensus 103 ~~g~~~iI~~G~aGgl~-~~~l~~GDvVi~~~~i~~dg~~~-----~~~p~~~~~~~d~~L~~~l~~~~~~~~~~~~~G~ 176 (267)
T 2b94_A 103 NNGAKVIIRAGSCGSLQ-PTQMKRGDICICNAAVREDRVSH-----LMIYSDFPAVADFEVYDTLNKVAQELEVPVFNGI 176 (267)
T ss_dssp HTTCCEEEEEEEEEESC-TTTCCTTCEEEEEEEEEESSTHH-----HHSCTTSCEECCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HcCCCEEEEeccccccC-cccCCCCCEEEEhhhcccCCCCc-----cccCCCcCCCCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 69999999999999999 68 99999999999999996311 1222222332355543 257899999
Q ss_pred EeeccccccCh---HhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCCc-cHH-HHHHHHHHHHHHHH
Q 025413 161 LSTGDSLDMSS---QDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKP-TAE-EFMQNLVAVTAALE 235 (253)
Q Consensus 161 i~sgd~~~~~~---~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~-~~~-~~~~~~~~aa~~~~ 235 (253)
++|+|.|+.+. +..+.+++++++++|||+++++++|+++++||++||+|||++++.+. +++ ++ ..+++....
T Consensus 177 i~sgd~f~~~~~~~~~~~~~~~~ga~~veME~aa~a~va~~~gip~~~Ir~IsD~~~~~~~~~~~~~~---~~~a~~~~~ 253 (267)
T 2b94_A 177 SLSSDLYYPHKIIPTRLEDYSKANVAVVEMEVATLMVMGTLRKVKTGGIFIVDGCPLKWDEGDFDNNL---VPEKLENMI 253 (267)
T ss_dssp EEEESSHHHHCCCCTTHHHHHHTTCCEEESSHHHHHHHHHHHTCEEEEEEEEEECGGGC-------CC---CHHHHHHHH
T ss_pred EeeeCccccCCcchHHHHHHHHcCCeEEeCcHHHHHHHHHHcCCcEEEEEEEEcccccCccccCCHHH---HHHHHHHHH
Confidence 99999999754 34455667899999999999999999999999999999999986543 222 22 233344445
Q ss_pred HHHHHHhHhh
Q 025413 236 QSVSQVIDFI 245 (253)
Q Consensus 236 ~~l~~~l~~~ 245 (253)
+.++++++.+
T Consensus 254 ~~~l~~l~~l 263 (267)
T 2b94_A 254 KISLETCARL 263 (267)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555554
No 13
>1z34_A Purine nucleoside phosphorylase; alpha-beta-alpha sandwich, transferase; HET: 2FD; 2.40A {Trichomonas vaginalis} PDB: 1z33_A* 1z35_A* 1z36_A* 1z37_A* 1z38_A* 1z39_A* 2i4t_A* 2isc_A*
Probab=100.00 E-value=2e-33 Score=237.96 Aligned_cols=208 Identities=17% Similarity=0.172 Sum_probs=164.9
Q ss_pred cCeEEEEEcchHhHHHHH-HhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHH
Q 025413 12 ISSVVIIIAMQTEAMPLV-NKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQ 90 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~-~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~ 90 (253)
+.+..|+++.|.+++.+. ..|++.+... ..+++.+|+|+++|++|+++.+| +|+++|+.++++|++
T Consensus 12 ~a~~vi~~gdp~r~~~ia~~~l~~~~~~~----~~~~~~~~~G~~~g~~V~v~~~G---------~G~~~aa~~~~~l~~ 78 (235)
T 1z34_A 12 FAETVLMCGDPLRAKLIAETYLENPKLVN----NVRGIQGYTGTYKGKPISVMGHG---------MGLPSICIYAEELYS 78 (235)
T ss_dssp SCSEEEEESCHHHHHHHHHHHCEEEEEEE----CGGGCCEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHHH
T ss_pred cCCEEEecCCHHHHHHHHHHHhhcceeee----eeCCEEEEEEEECCEEEEEEecC---------CCHHHHHHHHHHHHH
Confidence 457899999999999998 5777665431 34678999999999999999999 999999999999999
Q ss_pred HcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCC-ccCCCCChhhh---------hcCcceEEE
Q 025413 91 ALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVG-QRQAFSTPNLL---------RELNLKVCK 160 (253)
Q Consensus 91 ~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~-~~p~~~~~~l~---------~~~~~~~G~ 160 (253)
.++++.+|++|+|||++ +++++||+||+++++++|.... .|.++ ..+..++++|. .+++++.|.
T Consensus 79 ~~g~~~iI~~G~aGgl~-~~~~~GDvvv~~~~i~~d~~~~-----~~~p~~~~~~~~d~~L~~~~~~~~~~~~~~~~~G~ 152 (235)
T 1z34_A 79 TYKVKTIIRVGTCGAID-MDIHTRDIVIFTSAGTNSKINR-----IRFMDHDYPATASFDVVCALVDAAKELNIPAKVGK 152 (235)
T ss_dssp TSCCCEEEEEEEEEECS-TTCCTTCEEEEEEEEESCSHHH-----HHTTTSCCCCBCCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HcCCCEEEEEEccccCC-CCCCCCCEEEEcceeccCCccc-----cccCCCCcCccCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 89999999999999999 6999999999999999987311 12111 11212355543 257899999
Q ss_pred EeeccccccChHhHHH-HHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCC-ccHHHHHHHHHHHHHHHHHHH
Q 025413 161 LSTGDSLDMSSQDETS-ITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDK-PTAEEFMQNLVAVTAALEQSV 238 (253)
Q Consensus 161 i~sgd~~~~~~~~~~~-l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~-~~~~~~~~~~~~aa~~~~~~l 238 (253)
++|+|.|+.+.+.+.+ ++++|++++|||+++++++|+++++||++||+|||++++++ ++.+++++...++.+..++.+
T Consensus 153 ~~s~d~f~~~~~~~~~~~~~~g~~~veME~aa~~~~a~~~gi~~~~i~~IsD~~~~~~~~~~~~~~~~~~~~~~~al~~~ 232 (235)
T 1z34_A 153 GFSTDLFYNPQTELAQLMNKFHFLAVEMESAGLFPIADLYGARAGCICTVSDHILHHEETTAEERQNSFQNMMKIALEAA 232 (235)
T ss_dssp EEECSCSSCSCTHHHHHHHHTTCCEEESSHHHHHHHHHHTTCEEEEEEEEEEESSSCCC-----HHHHHHHHHHHHHHHH
T ss_pred EeecCcCcCCcHHHHHHHHHcCceEEechHHHHHHHHHHhCCcEEEEEEEEecCCCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999988765444 45789999999999999999999999999999999998754 466777777666666655554
No 14
>3ddo_A Urdpase, upase, uridine phosphorylase; transferase, cytoplasm, glycosyltransferase; 1.50A {Salmonella typhimurium} SCOP: c.56.2.1 PDB: 1ryz_A 1sj9_A* 1y1q_A* 1y1s_A 1y1r_A 1zl2_A* 2hn9_A 1y1t_A* 2hsw_A 2hwu_A* 2pga_A* 2hrd_A 3dps_A 3fwp_A* 3nsr_A* 3c74_A* 2qdk_A 2iq5_A 2oec_A* 2i8a_A ...
Probab=100.00 E-value=1.6e-33 Score=241.09 Aligned_cols=181 Identities=13% Similarity=0.088 Sum_probs=149.9
Q ss_pred CeEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHHHc
Q 025413 13 SSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQAL 92 (253)
Q Consensus 13 ~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~~ 92 (253)
.+|+|++|++.|++++.+.|+..+... ..+++.+|.|+++|++|+++.+| +|+++|+..++.| ..+
T Consensus 19 ~~i~ii~a~~~e~~~~~~~l~~~~~~~----~~~~~~~~~G~~~g~~V~~~~~G---------~G~~~aa~~~~~l-~~~ 84 (253)
T 3ddo_A 19 AQLAIVPGDPERVEKIAALMDKPVKLA----SHREFTSWRAELDGKAVIVCSTG---------IGGPSTSIAVEEL-AQL 84 (253)
T ss_dssp CCEEEEESCGGGHHHHHTTSEEEEEEE----EETTEEEEEEEETTEEEEEECCC---------SSHHHHHHHHHHH-HHT
T ss_pred CCEEEEccCHHHHHHHHHHhCCceEec----cCCCeEEEEEEECCEEEEEEeCC---------CChHHHHHHHHHH-HHc
Confidence 579999999999999999998765432 35678999999999999999999 9999999999988 779
Q ss_pred CCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCCCChhhh---------hcCcceEEEEee
Q 025413 93 KPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCKLST 163 (253)
Q Consensus 93 ~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~~~~~l~---------~~~~~~~G~i~s 163 (253)
+++.+|++|+|||++ +++++||+||+++++++|.... .|..++.|..++++|. .+.+++.|.++|
T Consensus 85 g~~~ii~~G~aGgl~-~~~~~Gdvvi~~~~i~~dg~~~-----~y~~~~~p~~~d~~l~~~l~~~a~~~~~~~~~G~~~s 158 (253)
T 3ddo_A 85 GIRTFLRIGTTGAIQ-PHINVGDVLVTTASVRLDGASL-----HFAPMEFPAVADFACTTALVEAAKSIGATTHVGVTAS 158 (253)
T ss_dssp TCCEEEEEEEECCCS-TTCCTTCEEEEEEEEEESSGGG-----GTSCTTSCEECCHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CCCEEEEEEeeccCC-CCCCCCeEEEechheeCCCccc-----ccCCCccCCcCCHHHHHHHHHHHHHCCCCEEEEEEEE
Confidence 999999999999999 7999999999999999986421 2444444543355442 257899999999
Q ss_pred ccccccChH---------------hHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCC
Q 025413 164 GDSLDMSSQ---------------DETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLV 213 (253)
Q Consensus 164 gd~~~~~~~---------------~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~ 213 (253)
+|.|+.+++ ..+.++++|++++|||+++++++|+.+|+|+++|..+++..
T Consensus 159 ~d~F~~~~~r~~~~~~~i~~~~~~~~~~~~~~ga~aveME~aa~a~va~~~gi~~~~i~~v~~~R 223 (253)
T 3ddo_A 159 SDTFYPGQERYDTYSGRVVRRFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNR 223 (253)
T ss_dssp ESCSSGGGTCCCSSSCCCCGGGTTHHHHHHHTTCCEEESSHHHHHHHHHTTTCEEEEEEEECCCT
T ss_pred cCcccCCcccccccccchhhhHHHHHHHHHHCCceEEeccHHHHHHHHHHcCCcEEEEEEEEEec
Confidence 999997543 34556678999999999999999999999977776655554
No 15
>1vhw_A Purine nucleoside phosphorylase; structural genomics, transferase; HET: ADN; 1.54A {Vibrio cholerae} SCOP: c.56.2.1 PDB: 1vhj_A* 3of3_A* 3occ_A* 1pw7_A* 1pr1_A* 1pr2_A* 1pr4_A* 1pr5_A* 1pr0_A* 1pr6_A* 3onv_A 1pk7_A* 1k9s_A* 1pke_A* 1pk9_A 3ooe_A 3ooh_A 1ecp_A 1a69_A 1oty_A* ...
Probab=100.00 E-value=6e-33 Score=237.60 Aligned_cols=211 Identities=19% Similarity=0.211 Sum_probs=168.3
Q ss_pred cCeEEEEEcchHhHHHHHH-hcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVN-KFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQ 90 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~-~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~ 90 (253)
+.+++|+++.|.+++.+.+ .|+..+... ..+++.+|+|+++|++|+++.+| +|++++++++++|++
T Consensus 15 ia~~vl~~Gdp~r~~~ia~~~l~~~~~~~----~~~~~~~~~G~~~g~~V~v~~~G---------~G~~~aa~~~~~l~~ 81 (253)
T 1vhw_A 15 FADVVLMPGDPLRAKYIAENFLDNAVQVC----DVRNMFGYTGTYKGRRISVMGHG---------MGIPSCSIYVTELIK 81 (253)
T ss_dssp SCSEEEECSCHHHHHHHHHHHSEEEEEEE----CGGGCCEEEEEETTEEEEEECCC---------SSHHHHHHHHHHHHH
T ss_pred cCCEEEEcCCHHHHHHHHHHHhhcceeEe----eeCCeEEEEEEECCEEEEEEeCC---------CCHHHHHHHHHHHHH
Confidence 3478999999999999985 676655321 34678999999999999999999 999999999999999
Q ss_pred HcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCc-cCCCCChhhh---------hcCcceEEE
Q 025413 91 ALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQ-RQAFSTPNLL---------RELNLKVCK 160 (253)
Q Consensus 91 ~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~-~p~~~~~~l~---------~~~~~~~G~ 160 (253)
.++++.+|++|+|||++ +++++||+||+++++ +|.+.. + .|..+. .+..++++|. .+++++.|.
T Consensus 82 ~~g~~~iI~~G~aGgl~-~~~~~GDvVi~~~~i-~d~g~~---~-~~~p~~~~~~~~d~~L~~~l~~~~~~~~~~~~~G~ 155 (253)
T 1vhw_A 82 DYGVKKIIRVGSCGAVN-EGIKVRDVVIGMGAC-TDSKVN---R-IRFKDHDFAAIADYKMVKAAEEAAKARGIDVKVGN 155 (253)
T ss_dssp HHCCCEEEEEEEEEECS-TTSCTTCEEEEEEEE-ESCSHH---H-HHTTTSBCCCBCCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HcCCCEEEEEEeccCCC-CCCCCCCEEEEcceE-ECCCCc---c-cccCCCcccccCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 89999999999999999 699999999999998 465532 1 111111 1222355543 257899999
Q ss_pred EeeccccccChHh-HHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCC-ccHHHHHHHHHHHHHHHHHHH
Q 025413 161 LSTGDSLDMSSQD-ETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDK-PTAEEFMQNLVAVTAALEQSV 238 (253)
Q Consensus 161 i~sgd~~~~~~~~-~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~-~~~~~~~~~~~~aa~~~~~~l 238 (253)
++|+|.|+.+.+. .+.++++|++++|||+++++++|+++++|+++||+|||+++..+ ++.++.++...++.+...+.+
T Consensus 156 i~s~d~f~~~~~~~~~~~~~~g~~~veME~aa~~~~a~~~gi~~~~I~~IsD~~~~~~~~~~~e~~~~~~~~~~~ale~~ 235 (253)
T 1vhw_A 156 LFSAELFYTPDPSMFDVMDKYGIVGVEMEAAGIYGVAAEYGAKALAICTVSDHIKTGEQTTSEERQNTFNEMIEIALDSV 235 (253)
T ss_dssp EEECSCSSCSCTTHHHHHHHTTCCEEESSHHHHHHHHHHHTCEEEEEEEEEEETTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCccccCcHHHHHHHHHcCCcEEechHHHHHHHHHHcCCCEEEEEEEEccCCCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999987654 44455789999999999999999999999999999999998643 577777777777766666666
Q ss_pred HHH
Q 025413 239 SQV 241 (253)
Q Consensus 239 ~~~ 241 (253)
.++
T Consensus 236 ~~~ 238 (253)
T 1vhw_A 236 LIG 238 (253)
T ss_dssp HHH
T ss_pred Hhc
Confidence 544
No 16
>3uaw_A PNP, purine nucleoside phosphorylase DEOD-type; necleoside phosphorylase I (NP-I) family, transferase; HET: ADN GOL; 1.20A {Bacillus cereus} PDB: 2ac7_A 3uav_A* 3uax_A* 1xe3_A 3uay_A* 3uaz_A* 4d8y_A 4d8x_A 4d8v_A 4d98_A 4d9h_A* 4da0_A* 4da6_A* 4da7_A* 4da8_A* 4dab_A* 4dae_A* 4dan_A* 4dao_A* 4dar_A*
Probab=100.00 E-value=1.4e-32 Score=232.80 Aligned_cols=207 Identities=21% Similarity=0.216 Sum_probs=163.0
Q ss_pred ccCeEEEEEcchHhHHHHHHh-cCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHH
Q 025413 11 AISSVVIIIAMQTEAMPLVNK-FELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASI 89 (253)
Q Consensus 11 ~~~~i~Ii~Al~~E~~~~~~~-l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li 89 (253)
.+-+..|++..|.+++.+.+. |++.+... ..+++.+|+|+++|++|+++.+| +|+++++..+++|+
T Consensus 11 ~~a~~vl~~gdp~r~~~ia~~~l~~~~~~~----~~r~~~~~~G~~~g~~v~v~~~G---------~G~~~aa~~~~~l~ 77 (235)
T 3uaw_A 11 EIAESILLPGDPLRAKYIAETFLEDVTCYN----NVRGMLGFTGTYKGKRVSVQGTG---------MGVPSISIYVNELI 77 (235)
T ss_dssp CSCSEEEECSSHHHHHHHHHHHCEEEEEEE----CGGGCCEEEEEETTEEEEEECCC---------SSHHHHHHHHHHHH
T ss_pred ccCCEEEecCCHHHHHHHHHHhccCcEEEe----eeCCEEEEEEEECCEEEEEEeCC---------CCHHHHHHHHHHHH
Confidence 345789999999999999986 56554432 35678999999999999999999 99999999999999
Q ss_pred HHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCC-ccCCCCChhhh---------hcCcceEE
Q 025413 90 QALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVG-QRQAFSTPNLL---------RELNLKVC 159 (253)
Q Consensus 90 ~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~-~~p~~~~~~l~---------~~~~~~~G 159 (253)
+.++++.+|++|+|||++ +++++||+||++++++ |.+.. . .|-.+ ..|..+|++|. .+++++.|
T Consensus 78 ~~~g~~~iI~~G~aGgl~-~~~~~GDvVi~~~~i~-d~g~~---~-~~~~~~~~~~~~d~~L~~~l~~~a~~~g~~~~~G 151 (235)
T 3uaw_A 78 QSYGVKNLIRVGTCGAIQ-KDVKVRDVIIAMTACT-DSNMN---R-LTFPGFDFAPAANFDLLKKAYDAGTEKGLHVRVG 151 (235)
T ss_dssp HHHCCCEEEEEEEEEECS-TTSCTTCEEEEEEEEE-SCSHH---H-HHSTTCCCCCBCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHCCCCEEEEEeeccCCC-CCCCCCcEEEEChhhc-cCCCC---c-cccCCCcccccCCHHHHHHHHHHHHHcCCCeEEE
Confidence 999999999999999999 7999999999999884 43321 0 01111 11222355553 26789999
Q ss_pred EEeeccccccChH-hHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCC-ccHHHHHHHHHHHHHHHHH
Q 025413 160 KLSTGDSLDMSSQ-DETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDK-PTAEEFMQNLVAVTAALEQ 236 (253)
Q Consensus 160 ~i~sgd~~~~~~~-~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~-~~~~~~~~~~~~aa~~~~~ 236 (253)
.++|+|.|+.+.. ..+.++++|++++|||+++++++|+++|+|+++||+|||.+...+ .+.++++....+..+..++
T Consensus 152 ~~~s~d~f~~~~~~~~~~~~~~g~~~veME~aa~~~va~~~gi~~~~i~~ISD~~~~~e~~~~~e~~~~~~~~~~~ale 230 (235)
T 3uaw_A 152 NVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAAKYGVNALSVLTVSDHIFTGEETTSEERQTTFNEMIEIALD 230 (235)
T ss_dssp EEEECSCSSCSCCHHHHHHHHTTCCEEESSHHHHHHHHHHHTCEEEEEEEEEEETTTCCBCCTGGGHHHHHHHHHHHHH
T ss_pred EEEEcCcCccCCHHHHHHHHHcCCcEEEccHHHHHHHHHHcCCCEEEEEEEecccCCCCcCChHHHHHHHHHHHHHHHH
Confidence 9999999998654 567777889999999999999999999999999999999986544 3445566555555544433
No 17
>3u40_A Pnpase, purine nucleoside phosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: ADN; 2.05A {Entamoeba histolytica} SCOP: c.56.2.0 PDB: 3tl6_A*
Probab=100.00 E-value=5e-32 Score=230.31 Aligned_cols=202 Identities=19% Similarity=0.246 Sum_probs=162.3
Q ss_pred cCeEEEEEcchHhHHHHHHh-cCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNK-FELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQ 90 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~-l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~ 90 (253)
+.+..|++..|.+++.+.+. |++.+... ..+++.+|+|+|+|++|+++.+| ||++++++.+++|++
T Consensus 21 ~a~~vl~~Gdp~R~~~iA~~~l~~~~~~~----~~r~~~~~tG~~~g~~V~v~~~G---------~G~~saai~~~eLi~ 87 (242)
T 3u40_A 21 IAETVLMAGDPLRVKLLADTYLTDVVQYN----SVRGAVGYTGYYKGVKLSVQAHG---------MGMPSIGIYAYELFN 87 (242)
T ss_dssp SCSEEEEESCHHHHHHHHHHHCEEEEEEE----CGGGCCEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHHH
T ss_pred cCCEEEEcCCHHHHHHHHHHHhhCcEEEE----EECCEEEEEEEECCEEEEEEeCC---------CCHHHHHHHHHHHHH
Confidence 34789999999999999985 46544432 35788999999999999999999 999999999999999
Q ss_pred HcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCc-cCCCCChhhh---------hcCcceEEE
Q 025413 91 ALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQ-RQAFSTPNLL---------RELNLKVCK 160 (253)
Q Consensus 91 ~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~-~p~~~~~~l~---------~~~~~~~G~ 160 (253)
.++++.+|++|+|||++ +++++||+||++++++.+.. . ..|..+. .|..+|++|. .+++++.|.
T Consensus 88 ~~gv~~iI~~GtaGgl~-~~~~~GDvVi~~~~i~~~~~-~----~~~~~~~~~~~~~d~~L~~~l~~~a~~~g~~~~~G~ 161 (242)
T 3u40_A 88 FYGVKRIIRIGSAGAFD-ESLKLGDIVIGMGACYDSNF-E----RQYDIPGKYSCIADFQLCREAVDAAEKLGYRYKVGN 161 (242)
T ss_dssp HSCCCEEEEEEEEEECS-TTCCTTCEEEEEEEEESCSS-S----GGGTCSSBCCEECCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HcCCCEEEEEEeeeCCC-CCCCCCCEEEecceeecCCc-c----ccccCCCcccccCCHHHHHHHHHHHHHcCCceEEeE
Confidence 99999999999999999 79999999999999875532 1 1232221 1212355553 257899999
Q ss_pred EeeccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeec-CC-CCCCccHHHHHHHHHHHHH
Q 025413 161 LSTGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTD-LV-DGDKPTAEEFMQNLVAVTA 232 (253)
Q Consensus 161 i~sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD-~~-~~~~~~~~~~~~~~~~aa~ 232 (253)
++|+|.|+.+++..+.++++|++++|||+++++++|+++|+|+++||+||| .. .++.++.++.++.+.+..+
T Consensus 162 i~s~d~fy~~~~~~~~~~~~g~~~veMEsaal~~va~~~gi~~~~i~~ISD~~~~~~e~~~~~e~~~~~~~~~~ 235 (242)
T 3u40_A 162 IYSANYFYDDGDHSGAWKKMGVLAVEMEAAALYMIAARARKQALCMLTISDLCYGSGEKMTAEERRTKFTQMME 235 (242)
T ss_dssp EEECSCSSCSSCCCHHHHHTTCCEEESSHHHHHHHHHHHTCEEEEEEEEEEESSTTCCBCCHHHHHHTTHHHHH
T ss_pred EEEeCCCcCCHHHHHHHHHcCCcEEEchHHHHHHHHHHcCCCEEEEEEEEcCcccCCCcCCHHHHHHHHHHHHH
Confidence 999999997777677788899999999999999999999999999999999 65 4444455666655554443
No 18
>2a8y_A 5'-methylthioadenosine phosphorylase (MTAP); alpha/beta, beta sheet, beta barrel, transferase; HET: MTA; 1.45A {Sulfolobus solfataricus} PDB: 3t94_A* 1v4n_A
Probab=100.00 E-value=4.7e-32 Score=233.68 Aligned_cols=228 Identities=14% Similarity=0.068 Sum_probs=178.4
Q ss_pred cccccCeEEEEEcchH-hHHHHHHhcCccccCccCCCCCCC--eEEEEEEECCeeEEEEe-cCCCCCCCcCCcChhHHHH
Q 025413 8 SQEAISSVVIIIAMQT-EAMPLVNKFELKEDQDSVFPEGVP--WVRYHGTYKDLHLNIIW-PGKDTSLEVDSVGTISASL 83 (253)
Q Consensus 8 ~~~~~~~i~Ii~Al~~-E~~~~~~~l~~~~~~~~~~~~~~~--~~~~~g~~~g~~v~l~~-~G~~~~~~~~giG~~~aa~ 83 (253)
.+++.++|+||+++.. |+..+.+.+....... .+. ..+|.|+++|++|+++. +|+.+.| + +++++++
T Consensus 3 ~~~~~p~igIIggsgl~e~~~l~~~~~~~~~~~-----~g~p~~~~~~G~~~G~~V~~~~r~G~gh~~--~-~~~v~~~- 73 (270)
T 2a8y_A 3 EQNEKASIGIIGGSGLYDPGIFSESKEIKVYTP-----YGQPSDFITIGKIGNKSVAFLPRHGRGHRI--P-PHKINYR- 73 (270)
T ss_dssp CCCCCCSEEEEECTTCSSCSCCSSEEEECCCCT-----TCCCSSCEEEEEETTEEEEEEETTTGGGCC--C-GGGCCHH-
T ss_pred cccCCCCEEEEecCchhHHHHHHhhheeeeEEE-----ecCCcceEEEEEECCEEEEEEECCCCCCCc--C-chhhhhH-
Confidence 4566778999999995 8765545444433321 233 68999999999999998 9942222 2 5789987
Q ss_pred HHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCC---CChhhh---------
Q 025413 84 VTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAF---STPNLL--------- 151 (253)
Q Consensus 84 ~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~---~~~~l~--------- 151 (253)
+..++++.++++.||++|+||||+ +++++||+||+++.+++|.+.....|+ +.....|.+ .|++|.
T Consensus 74 a~~~~l~~~Gv~~iI~~gaaG~l~-~~l~~GDlVi~~~~i~~~~~~~~~~~~-~~g~~~~~~~~~~d~~L~~~~~~~a~~ 151 (270)
T 2a8y_A 74 ANIWALKELGVRWVISVSAVGSLR-MDYKLGDFVIPDQFIDMTKNREYSFFD-GPVVAHVSMADPFCNSLRKLAIETAKE 151 (270)
T ss_dssp HHHHHHHHTTCCEEEEEEEEEESS-TTSCTTCEECCCEEEEECCSCCCCSCC-SSSCBCCCCSSCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeeeeccC-CCCCCCCEEEEhHHhhccCCCCCcccC-CCCCccCCCCcccCHHHHHHHHHHHHH
Confidence 677888999999999999999999 799999999999999999874321232 111122222 245553
Q ss_pred hcCcce-EEEEe--eccccccChHhHHHHH-hCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC--CCccHHHHHH
Q 025413 152 RELNLK-VCKLS--TGDSLDMSSQDETSIT-ANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG--DKPTAEEFMQ 225 (253)
Q Consensus 152 ~~~~~~-~G~i~--sgd~~~~~~~~~~~l~-~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~--~~~~~~~~~~ 225 (253)
.+++++ .|+++ +||.|... +..+.++ ++|+++||||+++++++|+++|+|+++|+.|||++++ ...+++++.+
T Consensus 152 ~g~~~~~~Gv~~~~~Gp~fet~-ae~~~~~~~~GadaV~Me~a~ea~vA~~~gi~~~~i~~Vsd~a~~~~~~~~~ee~~~ 230 (270)
T 2a8y_A 152 LNIKTHESGTYICIEGPRFSTR-AESRTWREVYKADIIGMTLVPEVNLACEAQMCYATIAMVTDYDVFAEIPVTAEEVTR 230 (270)
T ss_dssp HTCCEESCCEEEEECCSSCCCH-HHHHHHHHTTCCCEEESSHHHHHHHHHHTTCEEEEEEEEEECTTSSSSCCCHHHHHH
T ss_pred cCCeEEcceEEEEecCCEecCH-HHHHHHHHHcCCEEECCcHHHHHHHHHHCCCCEEEEEEEEecCCCCCCCCCHHHHHH
Confidence 257888 99886 88999854 5577888 7899999999999999999999999999999999986 3358999999
Q ss_pred HHHHHHHHHHHHHHHHhHhhcc
Q 025413 226 NLVAVTAALEQSVSQVIDFING 247 (253)
Q Consensus 226 ~~~~aa~~~~~~l~~~l~~~~~ 247 (253)
.++++++++.+.+.++++.+..
T Consensus 231 ~~~~~~~~~~~lv~~~i~~l~~ 252 (270)
T 2a8y_A 231 VMAENTEKAKKLLYALIQKLPE 252 (270)
T ss_dssp HHHHTHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999998853
No 19
>1wta_A 5'-methylthioadenosine phosphorylase; A/B structure, transferase; HET: ADE; 1.78A {Aeropyrum pernix}
Probab=100.00 E-value=1.2e-31 Score=231.71 Aligned_cols=223 Identities=14% Similarity=0.085 Sum_probs=176.0
Q ss_pred CeEEEEEcchH-hHHHHHHhcCccccCccCCCCCCC--eEEEEEEECCeeEEEEe-cCCCCCCCcCCcChhHHHHHHHHH
Q 025413 13 SSVVIIIAMQT-EAMPLVNKFELKEDQDSVFPEGVP--WVRYHGTYKDLHLNIIW-PGKDTSLEVDSVGTISASLVTYAS 88 (253)
Q Consensus 13 ~~i~Ii~Al~~-E~~~~~~~l~~~~~~~~~~~~~~~--~~~~~g~~~g~~v~l~~-~G~~~~~~~~giG~~~aa~~~~~l 88 (253)
++|+||+++.. |+..+.+.+....... .+. .++|.|+++|++|+++. +|+.+.| + +++++++ +..++
T Consensus 12 ~~igIIggsgl~e~~~l~~~~~~~~~~~-----~g~~~~~~~~G~~~G~~V~v~~r~G~gh~~--~-~~~v~~~-a~~~~ 82 (275)
T 1wta_A 12 AHVGVIGGSGLYDPGIVENPVEVKVSTP-----YGNPSDFIVVGDVAGVKVAFLPRHGRGHRI--P-PHAINYR-ANIWA 82 (275)
T ss_dssp CSEEEEECGGGCCTTTCEEEEEEEECCT-----TCCCSSCEEEEEETTEEEEEEETTTTTTCS--C-GGGCCHH-HHHHH
T ss_pred CCEEEEecCChhhhhhhhhhceeeeEEe-----cCCCcceEEEEEECCEEEEEEECCCCCCcc--C-hhhhhHH-HHHHH
Confidence 57999999976 7765555544433321 233 68999999999999998 9943332 3 5899987 67788
Q ss_pred HHHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCC-CCCCCccccCCCccCCC---CChhhh---------hcCc
Q 025413 89 IQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRR-IPIPVFDLYGVGQRQAF---STPNLL---------RELN 155 (253)
Q Consensus 89 i~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~-~~~~~f~~y~~~~~p~~---~~~~l~---------~~~~ 155 (253)
++.++++.||++|+|||++ +++++||+||+++.+++|.+ .+...|+ +.....|.+ .|++|. .+++
T Consensus 83 l~~~Gv~~iI~~gaaG~l~-~~l~~GDlVi~~~~i~~~~~~~~~~~~~-~~g~~~~~~~~~~d~~L~~~l~~~a~~~g~~ 160 (275)
T 1wta_A 83 LKALGVKWVISVSAVGSLR-EDYRPGDFVVPDQFIDMTKNRRHYTFYD-GPVTVHVSMADPFCEDLRQRLIDSGRRLGYT 160 (275)
T ss_dssp HHHHTCCEEEEEEEEEESS-TTSCTTCEECCCEEEEECCCCSCSCSCC-SSSCBCCCCSSCSCHHHHHHHHHHHHHHTCC
T ss_pred HHHcCCCEEEEecceeccC-CCCCCCCEEEEhHHhhhcCCCCccccCC-CCCcccCCCCcccCHHHHHHHHHHHHHcCCc
Confidence 8999999999999999999 79999999999999999987 3322232 111122222 245553 2578
Q ss_pred ce-EEEEe--eccccccChHhHHHHH-hCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCC--CccHHHHHHHHHH
Q 025413 156 LK-VCKLS--TGDSLDMSSQDETSIT-ANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGD--KPTAEEFMQNLVA 229 (253)
Q Consensus 156 ~~-~G~i~--sgd~~~~~~~~~~~l~-~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~--~~~~~~~~~~~~~ 229 (253)
++ .|+++ +||.|... +..+.++ ++|+++||||+++++++|+++|+||++|+.|||++++. ..+++++.+.+++
T Consensus 161 ~~~~Gv~~~~~Gp~f~t~-ae~~~~~~~~GadaV~Me~a~ea~vA~~~gi~~~~i~~Vsd~a~~~~~~~~~~e~~~~~~~ 239 (275)
T 1wta_A 161 VHERGTYVCIEGPRFSTR-AESRVWKDVFKADIIGMTLVPEINLACEAQLCYATLAMVTDYDVWADRPVTAEEVERVMIS 239 (275)
T ss_dssp EESCCEEEEECCSSCCCH-HHHHHHHHTSCCSEEESSHHHHHHHHHHTTCEEEEEEEEEECTTSSSSCCCHHHHHHHHHH
T ss_pred eecceEEEEecCCEecCH-HHHHHHHHHcCCEEEcccHHHHHHHHHHCCCCEEEEEEEEccCCCCCCCCCHHHHHHHHHH
Confidence 88 99886 88999854 5577888 78999999999999999999999999999999999864 3589999999999
Q ss_pred HHHHHHHHHHHHhHhhcc
Q 025413 230 VTAALEQSVSQVIDFING 247 (253)
Q Consensus 230 aa~~~~~~l~~~l~~~~~ 247 (253)
+++++.+.+.++++.+..
T Consensus 240 ~~~~~~~lv~~~i~~l~~ 257 (275)
T 1wta_A 240 NVERARRMLYDVIPKLAG 257 (275)
T ss_dssp HHHHHHHHHHHHGGGCSS
T ss_pred HHHHHHHHHHHHHHhhhh
Confidence 999999999999998853
No 20
>1cb0_A Protein (5'-deoxy-5'-methylthioadenosine phosphor; methylthioadenosine phosphorylase, purine nucleoside phospho purine salvage, adenine; HET: ADE; 1.70A {Homo sapiens} SCOP: c.56.2.1 PDB: 1cg6_A* 1k27_A* 1sd1_A* 1sd2_A* 3ozc_A* 3ozd_A* 3oze_A
Probab=100.00 E-value=1.4e-31 Score=232.53 Aligned_cols=216 Identities=12% Similarity=0.072 Sum_probs=168.4
Q ss_pred CeEEEEEcchHhHHHHHHhcCccccCccCCCCCC--CeEEEEEEECCeeEEEE-ecCCCCCCCcCCcCh------hHHHH
Q 025413 13 SSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGV--PWVRYHGTYKDLHLNII-WPGKDTSLEVDSVGT------ISASL 83 (253)
Q Consensus 13 ~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~--~~~~~~g~~~g~~v~l~-~~G~~~~~~~~giG~------~~aa~ 83 (253)
++|+||+|+..|.. +.+...+...... ..+ +.++|.|+++|++|+++ ++| +|+ +++++
T Consensus 10 ~~igII~gsg~e~~---~~l~~~~~~~~~~-p~g~~~~~~~~G~l~g~~V~~~~~~G---------~G~~~~~~~v~aa~ 76 (283)
T 1cb0_A 10 VKIGIIGGTGLDDP---EILEGRTEKYVDT-PFGKPSDALILGKIKNVDCVLLARHG---------RQHTIMPSKVNYQA 76 (283)
T ss_dssp CEEEEEECTTCCCG---GGSEEEEEECCCB-TTBCCSSCEEEEEETTEEEEEEETTT---------TTTCCCGGGCCHHH
T ss_pred CCEEEEecCCchhh---hhcccceeeeeec-CCCCCCccEEEEEECCEEEEEEECCC---------CCcccCcccccHHH
Confidence 47999999999973 3444333221111 123 56899999999999995 799 888 98887
Q ss_pred HHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCC--ccC-------CC-CChhhh--
Q 025413 84 VTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVG--QRQ-------AF-STPNLL-- 151 (253)
Q Consensus 84 ~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~--~~p-------~~-~~~~l~-- 151 (253)
+ .++++.++++.||++|+|||++ +++++||+||+++++++|.+.... | |..+ +.| .+ .+++|.
T Consensus 77 ~-~~~l~~~gv~~iI~~G~aG~l~-~~l~~GDiVi~~~~i~~~~~~~~~-~--~~~~~~~~~g~~~~~~~~~~d~~L~~~ 151 (283)
T 1cb0_A 77 N-IWALKEEGCTHVIVTTACGSLR-EEIQPGDIVIIDQFIDRTTMRPQS-F--YDGSHSCARGVCHIPMAEPFCPKTREV 151 (283)
T ss_dssp H-HHHHHHTTCSEEEEEEEEEECS-TTSCTTCEECCCEEEEECCSCCCC-S--CSSSCTTSCSEECCCCSSCSCHHHHHH
T ss_pred H-HHHHHHcCCCEEEEecceeecC-CCCCCCcEEEEHHHhhCcCCCCCc-c--cCCccccccCccCCCCcccCCHHHHHH
Confidence 7 7788899999999999999999 799999999999999999753321 2 2222 111 11 245543
Q ss_pred -------hcCcceE-EEE--eeccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC----CC
Q 025413 152 -------RELNLKV-CKL--STGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG----DK 217 (253)
Q Consensus 152 -------~~~~~~~-G~i--~sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~----~~ 217 (253)
.+++++. |++ +|||.|+...+. +.++++|+++||||+++++++|+++++||++||+|||++.+ ..
T Consensus 152 ~~~~a~~~~~~~~~gG~~~~~sG~~f~t~ae~-~~~~~~Ga~~V~ME~aa~a~vA~~~gi~~~~i~~VSd~a~~~~~~~~ 230 (283)
T 1cb0_A 152 LIETAKKLGLRCHSKGTMVTIEGPRFSSRAES-FMFRTWGADVINMTTVPEVVLAKEAGICYASIAMATDYDCWKEHEEA 230 (283)
T ss_dssp HHHHHHHTTCCEESCCEEEEECCSSCCCHHHH-HHHHHTTCCEEESSHHHHHHHHHHTTCEEEEEEEEEECTTC-----C
T ss_pred HHHHHHHcCCceEcceEEEEeeCCcccCHHHH-HHHHHcCCeEEeCcHHHHHHHHHHcCCCEEEEEEEEccccCcCcCCC
Confidence 2467888 788 999999876554 66677899999999999999999999999999999999532 23
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhHhhcc
Q 025413 218 PTAEEFMQNLVAVTAALEQSVSQVIDFING 247 (253)
Q Consensus 218 ~~~~~~~~~~~~aa~~~~~~l~~~l~~~~~ 247 (253)
.++++|.+.+++++..+.+.+.++|+.+..
T Consensus 231 ~~~~e~~~~~~~~~~~~~~lv~~~i~~l~~ 260 (283)
T 1cb0_A 231 VSVDRVLKTLKENANKAKSLLLTTIPQIGS 260 (283)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 589999999999999999999999998853
No 21
>3mb8_A Purine nucleoside phosphorylase; PNP, immucillin H, IMMH, TR; HET: IMH; 1.90A {Toxoplasma gondii}
Probab=99.98 E-value=2.4e-31 Score=229.97 Aligned_cols=210 Identities=17% Similarity=0.099 Sum_probs=164.9
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQA 91 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~ 91 (253)
+-+..|+++.|.+++.+.+.|++.+... ..+++.+|+|+|+|++|+++.+| ||++++++.+++|++
T Consensus 20 ia~~vll~GdP~R~~~iA~~l~~~~~~~----~~r~~~~ytG~~~G~~V~v~~~G---------iG~psaai~~~eLi~- 85 (279)
T 3mb8_A 20 VEPVVIIVGDPARTEEVANMCEKKQELA----YNREYRSFRVVYDSQPITVISHG---------IGCPGTSIAIEELAY- 85 (279)
T ss_dssp CCSEEEEESSHHHHHHHHTTSSEEEEEE----EETTEEEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHHH-
T ss_pred cCCEEEECCCHHHHHHHHHHhccceeee----eecCeEEEEEEECCEEEEEEECC---------CCHHHHHHHHHHHHH-
Confidence 4478999999999999999888766532 34689999999999999999999 999999999999987
Q ss_pred cCCCEEEEEeeecccCCCC-CCcccEEEeccceeccCCCCCCCccccCCCccCCCCChhhh---------hcCcceEEEE
Q 025413 92 LKPDLIINAGTAGGFKAKG-ASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCKL 161 (253)
Q Consensus 92 ~~~~~vi~~G~aG~l~~~~-~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~~~~~l~---------~~~~~~~G~i 161 (253)
++++.||++|+|||++ ++ +++||+||++.++++|.... .|..+..|..++++|. .+.+++.|.+
T Consensus 86 ~gv~~iIriGtaGgL~-~~~l~~GDiVI~~~ai~~dg~~~-----~y~~~~~p~~~d~~L~~~l~~~a~~~g~~~~~G~v 159 (279)
T 3mb8_A 86 LGAKVIIRAGTCGSLK-PKTLKQGDVCVTYAAVNETGLIS-----NILPEGFPCVATPHVYQALMDAAKELGIEAASGIG 159 (279)
T ss_dssp TTCCEEEEEEEEEESC-TTTSCTTCEEEEEEEEECCHHHH-----HHSCTTCCEECCHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred CCCCEEEEeecccCcC-cccCCCCCEEEeeeeEcCCCCcc-----ccCCCccCCcCCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9999999999999999 78 99999999999998885311 2433334433455553 2578999999
Q ss_pred eeccccccChHh---HHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCC---Cc--cHHHHHHHHHHHHHH
Q 025413 162 STGDSLDMSSQD---ETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGD---KP--TAEEFMQNLVAVTAA 233 (253)
Q Consensus 162 ~sgd~~~~~~~~---~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~---~~--~~~~~~~~~~~aa~~ 233 (253)
+|+|.|+.+... .+.++++|++ +|||+++++++|+.+|+|+++|++|||..... .. +.+...+...++...
T Consensus 160 ~S~D~Fy~e~~~~~k~~~~~~~Ga~-VEMEsaala~vA~~~gv~~~~I~~VSd~~~~~~~~~~~~~~~~~~~~~~~~i~i 238 (279)
T 3mb8_A 160 VTQDYFYQNGILPSKLEMYSKCCDV-IDMEMSGVLGLCQARGIATCGILAVDGSPLQWDEGDYDATGVKATTGKENMVKI 238 (279)
T ss_dssp EECSCSCCCCSSCCCHHHHHTTCSE-EESSHHHHHHHHHHTTCEEEEEEEECBCGGGGGGTCBCSSSHHHHHHHHHHHHH
T ss_pred EEECCCccCchHhHHHHHHHHcCCE-EecCHHHHHHHHHHcCCCEEEEEEEECCcccccccccccchHHHHHHHHHHHHH
Confidence 999999987653 4667778999 99999999999999999999999999987431 11 223333444444444
Q ss_pred HHHHHHHHh
Q 025413 234 LEQSVSQVI 242 (253)
Q Consensus 234 ~~~~l~~~l 242 (253)
.++.+.++.
T Consensus 239 alea~~~L~ 247 (279)
T 3mb8_A 239 TLKACANLR 247 (279)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444433
No 22
>3phc_A Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.00A {Plasmodium falciparum} PDB: 1q1g_A* 1nw4_A* 3fow_A*
Probab=99.97 E-value=2e-31 Score=230.14 Aligned_cols=183 Identities=17% Similarity=0.129 Sum_probs=154.3
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQA 91 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~ 91 (253)
+-+..|++..|.+++.+.+.|++.+... ..+++.+|+|+|+|++|+++.+| ||++++++.+++|++
T Consensus 16 ia~~vll~GdP~R~~~ia~~l~~~~~~~----~~r~~~~~tG~~~G~~V~v~~~G---------iG~psaai~~~eL~~- 81 (275)
T 3phc_A 16 ITPVVLVVGDPGRVDKIKVVCDSYVDLA----YNREYKSVECHYKGQKFLCVSHG---------VGSAGCAVCFEELCQ- 81 (275)
T ss_dssp CCSEEEEESCHHHHHHHHTTSSEEEEEE----EETTEEEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHHT-
T ss_pred cCCEEEECCCHHHHHHHHHHhccCeeee----eeCCeEEEEEEECCEEEEEEECC---------CChHHHHHHHHHHHH-
Confidence 4578999999999999999888765432 35789999999999999999999 999999999999986
Q ss_pred cCCCEEEEEeeecccCCCC-CCcccEEEeccceeccCCCCCCCccccCCCccCCCCChhhh---------hcCcceEEEE
Q 025413 92 LKPDLIINAGTAGGFKAKG-ASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCKL 161 (253)
Q Consensus 92 ~~~~~vi~~G~aG~l~~~~-~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~~~~~l~---------~~~~~~~G~i 161 (253)
++++.+|++|+|||++ ++ +++||+||+++++++|.... .|..+..|..++++|. .+.+++.|++
T Consensus 82 ~gv~~iI~~GtaGgL~-~~~i~~GDiVI~~~ai~~dg~~~-----~y~~~~~p~~~d~~L~~~l~~~a~~~g~~~~~G~v 155 (275)
T 3phc_A 82 NGAKVIIRAGSCGSLQ-PDLIKRGDICICNAAVREDRVSH-----LLIHGDFPAVGDFDVYDTLNKCAQELNVPVFNGIS 155 (275)
T ss_dssp TTCCEEEEEEEEEESC-TTTCCTTCEEEEEEEEEESSHHH-----HHSCTTSCEECCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCCEEEEeeeecCcc-cccCCCCcEEEEhheeccCCccc-----ccCCCCcCCcCCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9999999999999999 78 99999999999999885321 2433333433455553 2578999999
Q ss_pred eeccccccChHh---HHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCC
Q 025413 162 STGDSLDMSSQD---ETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVD 214 (253)
Q Consensus 162 ~sgd~~~~~~~~---~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~ 214 (253)
+|+|.|+.+.+. .+.++++|++++|||+++++++|+.+|+|+++|++|+|...
T Consensus 156 ~s~D~Fy~~~~~~~k~~~~~~~Ga~aVEMEsaal~~vA~~~gi~~~~I~~V~~~~~ 211 (275)
T 3phc_A 156 VSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMVIGTLRKVKTGGILIVDGCPF 211 (275)
T ss_dssp EEESCSSCCSSSCCSHHHHHHTTCCEEESSHHHHHHHHHHTTCEEEEEEEEEECGG
T ss_pred EEeCCCccCchhhHHHHHHHHcCCEEEECcHHHHHHHHHHcCCCEEEEEEEECCcc
Confidence 999999987664 36677889999999999999999999999999999987753
No 23
>1ybf_A AMP nucleosidase; structural genomics, protein structure initiative, PSI, NEW research center for structural genomics, nysgxrc; 2.90A {Bacteroides thetaiotaomicron} SCOP: c.56.2.1
Probab=99.97 E-value=6.5e-31 Score=226.69 Aligned_cols=181 Identities=15% Similarity=0.136 Sum_probs=149.0
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQA 91 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~ 91 (253)
+++++|+++.+.|++.+.+.++..... ..+. |. +++|++|+++.+| ||+++++.++ +++..
T Consensus 25 ~~~~vii~g~p~~~~~ia~~~~~~~~~-----~~~~--~~--~~~g~~V~v~~~G---------~G~~~aa~~~-~~l~~ 85 (268)
T 1ybf_A 25 FEPYILLTNFSHYLHVFAEHYGVPIVG-----EHTS--MP--NASAEGVTLINFG---------MGSANAATIM-DLLWA 85 (268)
T ss_dssp SCSEEEEESCHHHHHHHHHHHTCCCBT-----TTSS--SC--BCCCSSEEEEECC---------SCHHHHHHHH-HHTTT
T ss_pred CCCEEEEcCCHHHHHHHHHhccccEEc-----cCCc--ee--eECCeEEEEEECC---------CCHHHHHHHH-HHHHH
Confidence 458999999999999999998765431 1222 22 7899999999999 9999998875 56788
Q ss_pred cCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCCCChhhh---------hcCcceEEEEe
Q 025413 92 LKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCKLS 162 (253)
Q Consensus 92 ~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~~~~~l~---------~~~~~~~G~i~ 162 (253)
++++.+|++|+|||++ +++++||+||+++++++|.... .|..+..|..++.+|. .+++++.|+++
T Consensus 86 ~gv~~iI~~GtaGgl~-~~i~~GDvVi~~~~i~~d~~~~-----~~~~~~~p~~~~~~l~~~l~~~a~~~~~~~~~G~~~ 159 (268)
T 1ybf_A 86 IHPKAVIFLGKCGGLK-LENALGDYLLPIAAIRGEGTSN-----DYLPEEVPSLPSFSVLRAISSAIQNKGKDYWTGTVY 159 (268)
T ss_dssp TCCSEEEEEEEECCSS-CTTCTTCEEEEEEEEECSSTGG-----GTSCTTSCBCCCHHHHHHHHHHHHTTTCCEEEEEEE
T ss_pred cCCCEEEEEEeeecCC-CCCCCCcEEEEhhheecCCCcc-----cccCCccCCCCCHHHHHHHHHHHHHcCCCEEEEEEE
Confidence 9999999999999999 7999999999999999887532 2444555544454442 25688999999
Q ss_pred eccccccC--hHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCC
Q 025413 163 TGDSLDMS--SQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDK 217 (253)
Q Consensus 163 sgd~~~~~--~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~ 217 (253)
|+|.|+.+ ++..+.|++.|++++|||+++++++|+++++|+++||+|||+++..+
T Consensus 160 s~d~f~~e~~~e~~~~l~~~g~~~veMEsaal~~~a~~~gv~~~~i~~VsD~~~~~~ 216 (268)
T 1ybf_A 160 TTNRRVWEYDEKFKDYLRSTHASGVDMETATLMTVGFANKIPMGALLLISDRPMFPE 216 (268)
T ss_dssp ECSCCCCTTCHHHHHHHHHTTCSEEESSHHHHHHHHHHTTCCEEEEEEECSCSSCCS
T ss_pred EeCCCccCCCHHHHHHHHHcCCeEEecCHHHHHHHHHHcCCCEEEEEEEEcCCCCcc
Confidence 99998773 44567788889999999999999999999999999999999997654
No 24
>3qpb_A Uridine phosphorylase; hexamer, NP-I superfamily, pyrimidine salvage pathway, uridi phosphorylase, transition state; HET: R1P; 1.82A {Streptococcus pyogenes serotype M6}
Probab=99.97 E-value=1.3e-31 Score=232.11 Aligned_cols=185 Identities=16% Similarity=0.152 Sum_probs=152.8
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQA 91 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~ 91 (253)
+.++.|+++.|.|++.+.+.|+..+... ..+++.+|+|+++|++|+++.+| +|++++++.+++|++
T Consensus 44 ia~~vil~Gdp~r~~~ia~~~~~~~~~~----~~r~~~~~tG~~~g~~V~v~~~G---------~G~~~aa~~~~~L~~- 109 (282)
T 3qpb_A 44 VGRYVIMPGDPKRCAKIAEHFDNAVLVA----DSREYVTYTGTLNGEKVSVTSTG---------IGGPSASIAMEELKL- 109 (282)
T ss_dssp SCSEEEEESCGGGHHHHHTTSEEEEEEE----EETTEEEEEEEETTEEEEEECCC---------SSHHHHHHHHHHHHH-
T ss_pred CCCEEEECCCHHHHHHHHHHhCCCEEEe----ccCCeeEEEEEECCEEEEEEeCC---------CCHHHHHHHHHHHHH-
Confidence 3479999999999999999997655432 24678999999999999999999 999999999999988
Q ss_pred cCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCCCChhhh---------hcCcceEEEEe
Q 025413 92 LKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCKLS 162 (253)
Q Consensus 92 ~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~~~~~l~---------~~~~~~~G~i~ 162 (253)
++++.+|++|+|||++ +++++||+||+++++++|.... .|..+..|..++++|. .+++++.|.++
T Consensus 110 ~g~~~iI~~G~aGgl~-~~~~~GDvVi~~~ai~~dg~~~-----~y~~~~~p~~~d~~L~~~l~~~a~~~g~~~~~G~~~ 183 (282)
T 3qpb_A 110 CGADTFIRVGTCGGIE-LDVKGGDIVIATGAIRMEGTSK-----EYAPIEFPAVADLEVTNALVNAAKKLGYTSHAGVVQ 183 (282)
T ss_dssp TTCCEEEEEEEEEECS-TTCCTTCEEEEEEEEEESSTGG-----GTSCTTSCEECCHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred cCCCEEEEeeeeecCC-CCCCCCcEEEeeeeeecCCccc-----ccCCCccCCCCCHHHHHHHHHHHHHcCCCEEEEEEE
Confidence 9999999999999999 7999999999999999885321 2544444544465553 25789999999
Q ss_pred eccccccCh------------HhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEE-EEEeecCCCCC
Q 025413 163 TGDSLDMSS------------QDETSITANDATIKDMEGAAVAYVADLFKVPALF-VKAVTDLVDGD 216 (253)
Q Consensus 163 sgd~~~~~~------------~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~-ir~ISD~~~~~ 216 (253)
|+|.|+.+. ++.+.+++.|++++|||+++++++|+++|+|+++ +++|+|.++++
T Consensus 184 s~D~Fy~q~~~~~~~~~~e~~~~~~~~~~~Ga~aVEMEsaala~vA~~~gi~~~~il~visn~~~~~ 250 (282)
T 3qpb_A 184 CKDAFYGQHEPERMPVSYELLNKWEAWKRLGTKASEMESAALFVAASHLGVRCGSDFLVVGNQERNA 250 (282)
T ss_dssp EESCHHHHHCGGGSTTHHHHHHHHHHHHHTTCCEECSSHHHHHHHHHHHTCEEEEEEEEEEEHHHHH
T ss_pred EecceecccccccccccHhHHHHHHHHHHcCCeEEeccHHHHHHHHHHcCCCEEEEEEEEEcccccc
Confidence 999999521 1224455689999999999999999999999988 68999987543
No 25
>3euf_A Uridine phosphorylase 1; nucleoside phosphorylase, uridine rescue, 5- benzylacyclouridine, alternative splicing, glycosyltransferase, transferase; HET: BAU; 1.90A {Homo sapiens} PDB: 3eue_A* 3nbq_A 3ku4_A 3kuk_A* 3kvr_A 3kvy_A
Probab=99.97 E-value=7.4e-30 Score=224.78 Aligned_cols=214 Identities=16% Similarity=0.099 Sum_probs=158.3
Q ss_pred eEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEE---EECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHH
Q 025413 14 SVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHG---TYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQ 90 (253)
Q Consensus 14 ~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g---~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~ 90 (253)
++.|+++.|.+++.+.+.|........+....+++.+|+| +|+|++|+++.|| ||+++|++++++|++
T Consensus 72 ~~Vll~GDP~Rv~~iA~~~~~~~~l~~~~~~~R~~~~~tG~y~~ykG~~Vsv~stG---------IG~psaaI~~~ELi~ 142 (328)
T 3euf_A 72 KFVCVGGSPSRMKAFIRCVGAELGLDCPGRDYPNICAGTDRYAMYKVGPVLSVSHG---------MGIPSISIMLHELIK 142 (328)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHHTCCCTTCCCCCTTTTCCSCCEEEETTEEEEECC---------SSHHHHHHHHHHHHH
T ss_pred cEEEeCCCHHHHHHHHHHhhhhhccccccccccceEEEecceeEECCEEEEEEECC---------CCHHHHHHHHHHHHH
Confidence 5888999999999988888766422110113456778889 8999999999999 999999999999999
Q ss_pred H---cCCC--EEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCC---ccCCCCChhhh---------h-
Q 025413 91 A---LKPD--LIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVG---QRQAFSTPNLL---------R- 152 (253)
Q Consensus 91 ~---~~~~--~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~---~~p~~~~~~l~---------~- 152 (253)
. |+++ .||++|+|||+ ++++||+||++.+++.|... .+..+..| ..|..++++|. .
T Consensus 143 ~~~~~gv~~~~iIriGtaGgl---~l~vGDvVIa~~av~~d~t~---~~~~~~~g~~~~~p~~aD~~L~~~l~~aa~~~~ 216 (328)
T 3euf_A 143 LLYYARCSNVTIIRIGTSGGI---GLEPGTVVITEQAVDTCFKA---EFEQIVLGKRVIRKTDLNKKLVQELLLCSAELS 216 (328)
T ss_dssp HHHHTTCBSCEEEEEEEEEES---SSCTTCEEEEEEEECTTSCS---EEEEEETTEEEEEECCCCHHHHHHHHHHHHHHC
T ss_pred hhhhcCCCccEEEEEeeecCc---CCcCCcEEEecceecCCCcc---chhhhhcCCCCccCCCCCHHHHHHHHHHHHhcc
Confidence 7 6777 99999999999 39999999999999755431 12111122 22333465553 2
Q ss_pred cCcceEEEEeeccccccChHh----------------HHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCC-CC
Q 025413 153 ELNLKVCKLSTGDSLDMSSQD----------------ETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLV-DG 215 (253)
Q Consensus 153 ~~~~~~G~i~sgd~~~~~~~~----------------~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~-~~ 215 (253)
+.+++.|.++|+|.|+.++++ .++++++++.++|||+||++++|+.+|+|+++||+|||.. ++
T Consensus 217 ~~~~~~G~~~S~D~Fy~~q~r~~~~~~~~~~~~k~~~~~~~~~~gv~avEMEsAAla~va~~~gv~a~~I~~isdnr~~g 296 (328)
T 3euf_A 217 EFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAYAAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEG 296 (328)
T ss_dssp SSCEEEEEEEECSCSSGGGTCSCSSBCCSCHHHHHHHHHHHHHTTEEEEESSHHHHHHHHHHTTCEEEEEEEEEEETTSC
T ss_pred CCCeEEEEeeccCccccCccccccccccchhhhHHHHHHHHHHcCCEEEehHHHHHHHHHHHcCCcEEEEEEEEccccCC
Confidence 578999999999999986532 2234568999999999999999999999999999999977 44
Q ss_pred CCc-cHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 025413 216 DKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 245 (253)
Q Consensus 216 ~~~-~~~~~~~~~~~aa~~~~~~l~~~l~~~ 245 (253)
+.. +++++... ++.+..+.+.++|+..
T Consensus 297 e~~~~~~e~l~~---~~~~~~~~v~~~ik~~ 324 (328)
T 3euf_A 297 DQISSPRNVLSE---YQQRPQRLVSYFIKKK 324 (328)
T ss_dssp SSCCSCHHHHHH---HHTHHHHHHHHHHHHH
T ss_pred ccCCCcHHHHHH---HHHHHHHHHHHHHHHH
Confidence 432 34445433 3333445555555554
No 26
>3p0f_A Uridine phosphorylase 2; transferase; HET: BAU; 1.54A {Homo sapiens} PDB: 3p0e_A* 2xrf_A
Probab=99.96 E-value=1.2e-29 Score=221.13 Aligned_cols=213 Identities=15% Similarity=0.048 Sum_probs=157.3
Q ss_pred eEEEEEcchHhHHHHHHhcCccccCccCCCCCCCeEEEEE---EECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHH
Q 025413 14 SVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHG---TYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQ 90 (253)
Q Consensus 14 ~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~~~~~~~~g---~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~ 90 (253)
++.|+...|..++.+.+.+.............+++.+|+| .|+|++|+++.|| ||+++|++++++|++
T Consensus 43 ~~vl~pGdP~R~~~iA~~~~~~~~l~~~~~~~r~~~~~tG~y~~ykG~~Vsv~~tG---------iG~psaaI~~~ELi~ 113 (297)
T 3p0f_A 43 KFVCVGGSPNRMKAFALFMHKELGFEEAEEDIKDICAGTDRYCMYKTGPVLAISHG---------MGIPSISIMLHELIK 113 (297)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHHCCCCCCCCTTSCCTTSSSCCEEEETTEEEEECC---------SSHHHHHHHHHHHHH
T ss_pred CEEEeCCCHHHHHHHHHHHhhhhccccccceecceEEEEEEEeeECCeEEEEEECC---------CCHHHHHHHHHHHHH
Confidence 7899999999999777777653210001113456777888 5899999999999 999999999999999
Q ss_pred HcC-----CCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCc---cCCCCChhhh---------h-
Q 025413 91 ALK-----PDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQ---RQAFSTPNLL---------R- 152 (253)
Q Consensus 91 ~~~-----~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~---~p~~~~~~l~---------~- 152 (253)
.++ ++.||++|+|||++ +++||+||++.+++.... +.+..+..+. .|..++++|. .
T Consensus 114 ~~~~~~~~~~~iIriGtaGgl~---l~vGDvVIa~~av~~~~~---~~~~~~~~~~~~~~~~~ad~~L~~~l~~aa~~~~ 187 (297)
T 3p0f_A 114 LLHHARCCDVTIIRIGTSGGIG---IAPGTVVITDIAVDSFFK---PRFEQVILDNIVTRSTELDKELSEELFNCSKEIP 187 (297)
T ss_dssp HHHHTTCBSCEEEEEEEEEESS---SCTTCEEEEEEEECTTSC---SEEEEEETTEEEEEECBCCHHHHHHHHHHHHTST
T ss_pred hccccccCcceEEEEEeecccc---ccCCcEEeechhhhcccc---ccccccccCcccccccCCCHHHHHHHHHHHHhcC
Confidence 873 77999999999996 999999999999852211 1222111222 1223455542 2
Q ss_pred cCcceEEEEeeccccccChHh----------------HHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC-
Q 025413 153 ELNLKVCKLSTGDSLDMSSQD----------------ETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG- 215 (253)
Q Consensus 153 ~~~~~~G~i~sgd~~~~~~~~----------------~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~- 215 (253)
+.+++.|.++|+|.|+.++++ .+.++++|+.++|||+||++++|+.+|+|+++||.|||....
T Consensus 188 ~~~~~~G~~~S~D~Fy~~q~r~~~~~~~~~~~~k~~~~~~~~~~gv~avEMEsAAl~~va~~~gv~a~~i~~isdnr~~~ 267 (297)
T 3p0f_A 188 NFPTLVGHTMCTYDFYEGQGRLDGALCSFSREKKLDYLKRAFKAGVRNIEMESTVFAAMCGLCGLKAAVVCVTLLDRLDC 267 (297)
T ss_dssp TCCEEEEEEEECSCSSGGGTCSSSSCCCSCHHHHHHHHHHHHHHTEEEEESSHHHHHHHHHHTTCEEEEEEEEEEETTTC
T ss_pred CCCeEEEEEEECCccccCCcccccccccchhhhHHHHHHHHHHcCcEEEehHHHHHHHHHHHcCCcEEEEEEEEcCccCC
Confidence 568999999999999986532 233455799999999999999999999999999999998844
Q ss_pred CCc-cHHHHHHHHHHHHHHHHHHHHHHhHh
Q 025413 216 DKP-TAEEFMQNLVAVTAALEQSVSQVIDF 244 (253)
Q Consensus 216 ~~~-~~~~~~~~~~~aa~~~~~~l~~~l~~ 244 (253)
+.. ++++|...+.+.+ .+.+.++|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~---~~lv~~~i~~ 294 (297)
T 3p0f_A 268 DQINLPHDVLVEYQQRP---QLLISNFIRR 294 (297)
T ss_dssp SSCCCCHHHHHHHHTHH---HHHHHHHHHH
T ss_pred CcccChHHHHHHHHHHH---HHHHHHHHHH
Confidence 443 5678876655544 4555556554
No 27
>3bje_A Nucleoside phosphorylase, putative; uridine phosphorylase, structural medical structural genomics of pathogenic protozoa consorti MSGPP; HET: R1P; 1.44A {Trypanosoma brucei}
Probab=99.96 E-value=1.5e-28 Score=218.05 Aligned_cols=187 Identities=17% Similarity=0.186 Sum_probs=153.1
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccc--cCccCCCCCCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKE--DQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASI 89 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~--~~~~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li 89 (253)
+-+..|++..|.|++.+.+.|+..+ ... ..+++.+|+|+|+|++|+++.|| ||++++++++++|+
T Consensus 42 ia~~Vil~GDP~Rv~~ia~~ld~~~~~~~~----~~R~~~~~tG~ykG~~Vsv~stG---------mG~psaaI~~~ELi 108 (349)
T 3bje_A 42 LADRIIFVGDPGRVDVISGYFDKDSIRASR----DHREIRFATGTYKGTPVTVISTG---------MGVDNIEIVLNEIH 108 (349)
T ss_dssp CCSEEEEESSTTHHHHHHTTSCTTCCCEEE----EETTEEEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHH
T ss_pred CCCeEEECCCHHHHHHHHHHHhccccceEE----eecCeEEEEEEECCEEEEEEECC---------CCHHHHHHHHHHHH
Confidence 3467899999999999999998766 221 35789999999999999999999 99999999999999
Q ss_pred HH--c-------------------------CCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCC---
Q 025413 90 QA--L-------------------------KPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGV--- 139 (253)
Q Consensus 90 ~~--~-------------------------~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~--- 139 (253)
+. | +++.||++|+|||++ +++++||+||++.++++|.... | |..
T Consensus 109 ~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~iIrvGT~Ggl~-~~l~vGdvVI~~~ai~~Dg~~~---~--y~~~~~ 182 (349)
T 3bje_A 109 ALKEYDMERGQWRHRKGDADAPSAGPFFDPSTMKIIRLGTCGSPA-ESVPPLALAVTRHAIGMDNTSL---Y--YSAGTR 182 (349)
T ss_dssp HHHHEETTTTEECBCTTCTTSCTTCCBCCGGGCEEEEEEEEEECC-TTSCTTCEEEEEEEEECSCGGG---G--GTTTTS
T ss_pred HHhhcccccccccccccccccccccccccCCCcEEEEeecccCCC-CCCCCCCEEEEeeeEeccCccc---c--cccccc
Confidence 87 5 599999999999999 7999999999999999987642 1 221
Q ss_pred --------------Ccc------C--CCCChhhh---------hc---------CcceEEEEeeccccccChHhH-----
Q 025413 140 --------------GQR------Q--AFSTPNLL---------RE---------LNLKVCKLSTGDSLDMSSQDE----- 174 (253)
Q Consensus 140 --------------~~~------p--~~~~~~l~---------~~---------~~~~~G~i~sgd~~~~~~~~~----- 174 (253)
+++ | ..++++|. .+ .+++.|.++|+|.|+.++.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~ad~~L~~~l~~aa~~~~~~~~~~~~~~~~~~G~t~S~D~Fy~~q~r~~grf~ 262 (349)
T 3bje_A 183 ETSKDQQEIRRIVREQTGLRAIDIYTSMAHPNITKSICAACDAHNAATGSEADKQQYVIGTTATASGFYGCQGRRVGRFM 262 (349)
T ss_dssp CCCHHHHHHHHHHHHHSGGGGSCCEEEECCHHHHHHHHHHHHHHHHTCCCGGGCCCEEEEEEEECSSSSGGGTCCCGGGG
T ss_pred cccccchhhhcccccccccCCCCcccCcCCHHHHHHHHHHHHHcCCccccccccccEEEEEEEECCccccCCcccccccc
Confidence 111 1 12355543 12 689999999999999775421
Q ss_pred ---------HHHH---------hCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCCC
Q 025413 175 ---------TSIT---------ANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDK 217 (253)
Q Consensus 175 ---------~~l~---------~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~ 217 (253)
++|. ++++.++|||+++++++|+.+|+|+++|++|||.....+
T Consensus 263 ~~~~~~~~~~kl~~~~~~~~~~~~gv~~vEMEsaal~~la~~~g~~a~~i~~Vsdn~~~~~ 323 (349)
T 3bje_A 263 KHLTVPNMVEELGSLKFNLSNGVEVVTNIEMETSAICYLSDMLGYQAGAACVVVSKRVGEK 323 (349)
T ss_dssp GGCSSTTHHHHHHHCCEEETTEEECEEEEESSHHHHHHHHHHHTCEEEEEEEEEEESSTTC
T ss_pred cccccHHHHHHHHHhhhcchhhhcCcEEEECcHHHHHHHHHHcCCCEEEEEEEEccCCCCc
Confidence 4554 469999999999999999999999999999999987554
No 28
>1t8s_A AMP nucleosidase; alpha-beta-alpha sandwich, alpha-beta fold, hydrolase; HET: FMP; 2.60A {Escherichia coli} SCOP: c.56.2.1 PDB: 1t8r_A* 1t8w_A 1t8y_A 2guw_A
Probab=99.96 E-value=1.9e-28 Score=224.61 Aligned_cols=185 Identities=19% Similarity=0.153 Sum_probs=137.5
Q ss_pred CCCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEecccee
Q 025413 45 GVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAF 124 (253)
Q Consensus 45 ~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~ 124 (253)
..+..+|.|+++|++|+++.+| ||++||++++++| ..++++.||++|+|||++ +++++||+||++++++
T Consensus 258 ~~~~~~~~G~~~G~~VvVv~tG---------mG~~nAAi~~~eL-~~~gvk~II~vGtAGgL~-~di~lGDVVIa~~ai~ 326 (484)
T 1t8s_A 258 HQMPAWHLITADGQGITLVNIG---------VGPSNAKTICDHL-AVLRPDVWLMIGHCGGLR-ESQAIGDYVLAHAYLR 326 (484)
T ss_dssp CSSCEEEEEETTSCCEEEEECC---------SSHHHHHHHHHHH-GGGCCSEEEECCEEEECS-TTCCTTCEEEEEEEEE
T ss_pred CCCceEEEEEECCEEEEEEeCC---------CChHHHHHHHHHH-HHcCCCEEEEEEEeeccC-CCCcCCEEEEEeeEEE
Confidence 4567999999999999999999 9999999999988 779999999999999999 6999999999999999
Q ss_pred ccCCCCCCCccccCCCccCCCCChh----hh-------------hcCcceEEEEeeccccccC---hHhHHHHHhCCCeE
Q 025413 125 HDRRIPIPVFDLYGVGQRQAFSTPN----LL-------------RELNLKVCKLSTGDSLDMS---SQDETSITANDATI 184 (253)
Q Consensus 125 ~d~~~~~~~f~~y~~~~~p~~~~~~----l~-------------~~~~~~~G~i~sgd~~~~~---~~~~~~l~~~~~~~ 184 (253)
+|.... . |..+..|..++.+ |. .+++++.|+++|+|.|+.+ ++..+.+++.|+++
T Consensus 327 ~Dg~~~--~---y~~~~~p~pa~~~l~~~L~~aA~~~~~~~g~~lg~~v~~G~i~SgD~Fy~E~r~~~~~~~~~~~Gala 401 (484)
T 1t8s_A 327 DDHVLD--A---VLPPDIPIPSIAEVQRALYDATKLVSGRPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVA 401 (484)
T ss_dssp ECCTTT--T---TSCTTSCCCCCHHHHHHHHHHHHHHSSCCGGGGGGTEEEEEEEEESCTTGGGGHHHHHHHHHHHTEEE
T ss_pred CCCCcc--c---ccCCCCCCCCCHHHHHHHHHHHHHHhhhcccccCCceEEEEEEEcCccccccCCHHHHHHHHhcCCeE
Confidence 997643 1 2222233212222 11 1457899999999999853 33445555679999
Q ss_pred EecchHHHHHHHHhCCCCEEEEEEeecCCCCCCc-cHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 025413 185 KDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 245 (253)
Q Consensus 185 vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~-~~~~~~~~~~~aa~~~~~~l~~~l~~~ 245 (253)
+|||+++++++|+++++|+++||+|||+++..+. +...+.+....+.....+..++.++.+
T Consensus 402 VEMEsAAla~vA~~~gvp~l~Ir~VSD~a~~~e~~~~~~~~~~~~~a~~~ai~iaLeai~~L 463 (484)
T 1t8s_A 402 IDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLL 463 (484)
T ss_dssp EESSHHHHHHHHHHTTCCEEEEEEEEECTTSSCCC----------CHHHHHHHHHHHHHHHH
T ss_pred EeccHHHHHHHHHHcCCCEEEEEEEEecCCcccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986542 122222223333444445555555554
No 29
>2p4s_A Purine nucleoside phosphorylase; transferase; HET: DIH; 2.20A {Anopheles gambiae}
Probab=99.95 E-value=1.5e-26 Score=205.37 Aligned_cols=220 Identities=14% Similarity=0.121 Sum_probs=166.5
Q ss_pred CeEEEEEcchHhHHHHHHhcCccccCcc--------CCCC-CCCeEEEEEEECCeeEEEEecCCCCCCCcCCcC------
Q 025413 13 SSVVIIIAMQTEAMPLVNKFELKEDQDS--------VFPE-GVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVG------ 77 (253)
Q Consensus 13 ~~i~Ii~Al~~E~~~~~~~l~~~~~~~~--------~~~~-~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG------ 77 (253)
++|+||+.+... .+.+.++......+ +.+. ..+ .+|.|+++|++|+++. | +|
T Consensus 110 p~igIIgGSGL~--~la~~le~~~~i~y~~ipgfp~sTv~Gh~g-~l~~G~l~G~~Vvvm~-G---------rgH~yeg~ 176 (373)
T 2p4s_A 110 PKVGIICGSGLG--TLAEQLTDVDSFDYETIPHFPVSTVAGHVG-RLVFGYLAGVPVMCMQ-G---------RFHHYEGY 176 (373)
T ss_dssp CSEEEEECTTCT--HHHHTCEEEEEEEGGGSTTCCCCCSTTCCC-EEEEEEETTEEEEEEE-S---------CCCGGGTC
T ss_pred CcEEEECCccHh--HHHhhcCeeEEEecccCCCCCCCCCCCCCc-eeEEEEECCEEEEEEe-C---------CCcCCCCC
Confidence 579999999743 44445544333210 0111 233 8999999999999999 8 56
Q ss_pred hhHHHHHHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccceec---cCCCCCCCccccCCC-ccCCC---CChhh
Q 025413 78 TISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFH---DRRIPIPVFDLYGVG-QRQAF---STPNL 150 (253)
Q Consensus 78 ~~~aa~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~---d~~~~~~~f~~y~~~-~~p~~---~~~~l 150 (253)
+++++.+..++++.++++.||++|.||||+ +++++||+||+++.+++ ........++.+.++ ..|.+ .|++|
T Consensus 177 ~v~~v~a~i~llk~lGV~~II~tgaaGgL~-~~l~pGDlVI~~d~Id~dd~t~~~pl~g~~~~~~gv~~~~ms~~yd~~L 255 (373)
T 2p4s_A 177 PLAKCAMPVRVMHLIGCTHLIATNAAGGAN-PKYRVGDIMLIKDHINLMGFAGNNPLQGPNDERFGPRFFGMANTYDPKL 255 (373)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEEEEEECS-TTCCTTCEEEEEEEECHHHHTTCCTTCSCCCTTTCCSCBCCTTSBCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccEeecC-CCCCCCCEEEEhHHhcCcCcCCCCCccccCccccCCCCCCCCccCCHHH
Confidence 677766677899999999999999999999 79999999999999988 433222122222222 12222 24555
Q ss_pred h---------hcC--cceEEEEe--eccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC--
Q 025413 151 L---------REL--NLKVCKLS--TGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG-- 215 (253)
Q Consensus 151 ~---------~~~--~~~~G~i~--sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~-- 215 (253)
. .++ .++.|+++ +|++|... ++.+.++++|+++||||+++++++|+++++|+++|+.|||++..
T Consensus 256 r~~a~~aA~~~gi~~~~~~Gvyv~~~GP~FeT~-AE~r~lr~~GadaVgMetapEa~lAre~Gi~~~~I~~VTD~a~~~~ 334 (373)
T 2p4s_A 256 NQQAKVIARQIGIENELREGVYTCLGGPNFETV-AEVKMLSMLGVDAIGMSTVHEIITARHCGMTCFAFSLITNMCTMSY 334 (373)
T ss_dssp HHHHHHHHHHTTCGGGEEEEEEEECCCSSCCCH-HHHHHHHHTTCCEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCS
T ss_pred HHHHHHHHHHcCCCcceeeEEEEEeeCCcccCH-HHHHHHHHcCCeEEecChHHHHHHHHHcCCCEEEEEEeeccccccc
Confidence 3 134 47899886 68888755 55677888999999999999999999999999999999999974
Q ss_pred ---CCccHHHHHHHHHHHHHHHHHHHHHHhHhhcc
Q 025413 216 ---DKPTAEEFMQNLVAVTAALEQSVSQVIDFING 247 (253)
Q Consensus 216 ---~~~~~~~~~~~~~~aa~~~~~~l~~~l~~~~~ 247 (253)
...+++++.+.++++++.+.+.|.++|+.+..
T Consensus 335 ~~~~~vs~eEvle~~~~~~~~~~~Lv~~~I~~l~~ 369 (373)
T 2p4s_A 335 EEEEEHCHDSIVGVGKNREKTLGEFVSRIVKHIHY 369 (373)
T ss_dssp SSCCCCCHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 23489999999999999999999999998853
No 30
>3ozb_A Methylthioadenosine phosphorylase; 5'-methylthioinosine,phosphorylase, transferase; HET: HPA; 2.80A {Pseudomonas aeruginosa}
Probab=99.95 E-value=6.8e-27 Score=199.83 Aligned_cols=222 Identities=14% Similarity=0.134 Sum_probs=158.9
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccc--cCccCCCCCCCeEEEEEEECCeeEEEEe-cCCCCCCCcCCcChhHHHHHHHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKE--DQDSVFPEGVPWVRYHGTYKDLHLNIIW-PGKDTSLEVDSVGTISASLVTYAS 88 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~--~~~~~~~~~~~~~~~~g~~~g~~v~l~~-~G~~~~~~~~giG~~~aa~~~~~l 88 (253)
.++|+||+.+..- .+.. +...+ ...+++.. -.-+++.|+++|++|+++. +|..+ ..| +.++++++ ..++
T Consensus 15 ~p~igiI~GSGl~--~l~~-~~~~~~~~~~tpyg~-~s~~l~~G~l~G~~Vv~l~rhG~gh--~~~-~~~V~~~a-~i~~ 86 (259)
T 3ozb_A 15 MSVYAIIGGTGLT--QLEG-LTLSESLPIETPYGA-PSAPLQRGRYAGREVLFLARHGHPH--RFP-PHQVNYRA-NLWA 86 (259)
T ss_dssp CCCEEEEECTTST--TCTT-CCCCCCBCCCBTTBC-CSSCBEEEEETTEEEEEEESSCC-----CC-GGGSCHHH-HHHH
T ss_pred CCCEEEEccCCcc--hhhh-cccccceeEEccCCC-CcceEEEEEECCEEEEEEeCcCCCc--ccC-hhhcchHH-HHHH
Confidence 3579999988722 1111 22111 12233322 1346899999999999886 78211 112 33777765 4567
Q ss_pred HHHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCC-ccCCC---CChhhh---------hcCc
Q 025413 89 IQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVG-QRQAF---STPNLL---------RELN 155 (253)
Q Consensus 89 i~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~-~~p~~---~~~~l~---------~~~~ 155 (253)
++.++++.||++|+|||++ +++++||+||+++.++++.+.....|+....+ ..|.+ .|++|. .+++
T Consensus 87 l~~~Gv~~II~tgaaGgl~-~~l~~GDlVi~~d~i~~~~~~~~t~~~~~~~~~~~~~~~~~~d~~L~~~~~~~a~~~gi~ 165 (259)
T 3ozb_A 87 LKQAGAEAVIAVNAVGGIH-AAMGTGHLCVPHQLIDYTSGREHTYFAGDIEHVTHIDFSHPYDEPLRQRLIEALRALGLA 165 (259)
T ss_dssp HHHHTCSEEEEEEEEEECS-TTSCTTCEECCSEEEECCCSSCCCSSSSSCSSCCCCCCSSCSCHHHHHHHHHHHHHTTCC
T ss_pred HHHcCCCEEEEccceeecc-cccCCCCEEEehhhcccCCCCCCcCCCCcccCCCcCccCCCCCHHHHHHHHHHHHHcCCC
Confidence 8999999999999999999 79999999999999999875332123211111 11211 245553 2456
Q ss_pred -ceEEE--EeeccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCC---CccHHHHHHHHHH
Q 025413 156 -LKVCK--LSTGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGD---KPTAEEFMQNLVA 229 (253)
Q Consensus 156 -~~~G~--i~sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~---~~~~~~~~~~~~~ 229 (253)
++.|+ +.+||.|.. +.+.+.+++.|+++||||+++++++|+++++|+++|+.|||++++. ..+++++.+.+++
T Consensus 166 ~~~~Gvy~~~~Gp~fet-~aE~~~~~~~GadaVgMe~~~ea~vA~~~gi~~~~I~~ISD~a~~~~~~~~s~eev~~~a~~ 244 (259)
T 3ozb_A 166 HSSHGVYACTQGPRLET-VAEIARLERDGNDIVGMTGMPEAALARELDLPYACLALVVNPAAGKSAGIITMAEIEQALHD 244 (259)
T ss_dssp EESCCEEEECCCSSCCC-HHHHHHHHHTTCSEEESSSTTHHHHHHHTTCCEEEEEEEEEECTTTSSSCCCHHHHHHHHHH
T ss_pred eEeeeEEEEEeCCccCC-HHHHHHHHHcCCEEEcCcHHHHHHHHHHcCCCeEEEEEEEeCCCCcCCCCCCHHHHHHHHHH
Confidence 67887 567899974 4445677889999999999999999999999999999999999763 2489999999999
Q ss_pred HHHHHHHHHHHHhH
Q 025413 230 VTAALEQSVSQVID 243 (253)
Q Consensus 230 aa~~~~~~l~~~l~ 243 (253)
+++.+.+.|.++++
T Consensus 245 ~~~~~~~l~~~~i~ 258 (259)
T 3ozb_A 245 GIGKVREVLARVLA 258 (259)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999888764
No 31
>1vmk_A Purine nucleoside phosphorylase; TM1596, structural genomics protein structure initiative, PSI, joint center for structu genomics; HET: GUN; 2.01A {Thermotoga maritima} SCOP: c.56.2.1
Probab=99.95 E-value=1.8e-26 Score=198.68 Aligned_cols=224 Identities=17% Similarity=0.192 Sum_probs=158.7
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCc--------cCCCCCCCeEEEEEEECCeeEEEEecCCCCCC-CcCCcChhHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQD--------SVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSL-EVDSVGTISAS 82 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~-~~~giG~~~aa 82 (253)
.++|+||+.+... .+.+.+....... .+.+.+-.-.+|.|+++|++|+++. |+.+.| +.+ ++++++
T Consensus 31 ~p~igiI~GSGl~--~l~~~~~~~~~~py~~ip~f~~~t~~Gh~~~l~~G~l~G~~Vv~~~-GrgH~yeG~~-p~~V~~- 105 (277)
T 1vmk_A 31 SPDILIILGSGFG--PFIEKVEDPVIIDYKDIPHFPQPTVEGHSGKLVFGRISDKPVMIMA-GRFHLYEGHD-PATVAF- 105 (277)
T ss_dssp CCSEEEEEC---C--TTTTTCEEEEEEEGGGSTTCC--------CEEEEEEETTEEEEEEE-SCCCGGGTCC-HHHHHH-
T ss_pred CCCEEEEccCchh--hHhhhcccceEEecccCCCCCCCCCCCCCceEEEEEECCEEEEEEe-cCCcccCCCC-HHHHHH-
Confidence 4679999998753 2222333222110 0011122357999999999999998 832221 222 447776
Q ss_pred HHHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCC-ccCCC---CChhhhh----cC
Q 025413 83 LVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVG-QRQAF---STPNLLR----EL 154 (253)
Q Consensus 83 ~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~-~~p~~---~~~~l~~----~~ 154 (253)
..++++.++++.||++|.|||++ +++++||+||+++.++++.+.+...++.-..| ..|.+ .|++|.. ++
T Consensus 106 --~i~~l~~lGv~~II~tgaaG~l~-~~l~~GDlVi~~d~i~~t~~~p~~g~~~~~~g~~~~~~~~~~d~~L~~~~a~~i 182 (277)
T 1vmk_A 106 --PVYLAKYVGVKGVVVTNAAGAIN-PEFKPGEIILVRDIINFMFRNPLRGPNDEKIGPRFPDMSSVVDPEWARKIQERL 182 (277)
T ss_dssp --HHHHHHHHTCCEEEEEEEEEECS-TTCCTTCEEEEEEEEECSCCCTTCSCCCTTTCCSSCCCTTCSCHHHHHHHHHHH
T ss_pred --HHHHHHHcCCCEEEEecceecCC-CCCCCCCEEEEhHHHhhCCCCCcccCCCcccCcccCCCccccCHHHHHHHhhhC
Confidence 45788999999999999999999 79999999999999999886432122211122 22322 1455532 14
Q ss_pred cceEEEEe--eccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCCC---CccHHHHHHHHHH
Q 025413 155 NLKVCKLS--TGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGD---KPTAEEFMQNLVA 229 (253)
Q Consensus 155 ~~~~G~i~--sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~---~~~~~~~~~~~~~ 229 (253)
+++.|+++ +|++|.+. ++.+.+++.|+++|+||+++++++|+++++|+++|+.|||++.+. ..+++++.+.+++
T Consensus 183 ~~~~Gvy~~~~Gp~feT~-AE~~~~r~~Gad~VgMe~~pea~lAr~~gi~~~~I~~ITD~a~g~~~~~~s~eev~~~~~~ 261 (277)
T 1vmk_A 183 SLKEGVYIGVLGPSYETP-AEIRVFEKLGADLVGMSTVPEVIAAKHCGLKVVVFSCVTNMAAGITHGRLSHEEVVRTTKM 261 (277)
T ss_dssp CCEEEEEEECCCSSCCCH-HHHHHHHHTTCSEEESSSHHHHHHHHHHTCEEEEEEEEEEECTTC-----CHHHHHHHHHH
T ss_pred CCceEEEEEeeCCcccCH-HHHHHHHHcCCeEEecChHHHHHHHHHCCCCEEEEEEEecCccCcCCCCCCHHHHHHHHHH
Confidence 67899876 78888755 557778888999999999999999999999999999999999853 3489999999999
Q ss_pred HHHHHHHHHHHHhHh
Q 025413 230 VTAALEQSVSQVIDF 244 (253)
Q Consensus 230 aa~~~~~~l~~~l~~ 244 (253)
+++.+.+.+.++|+.
T Consensus 262 ~~~~~~~lv~~~i~~ 276 (277)
T 1vmk_A 262 AQGKIEKALTTAVEV 276 (277)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988864
No 32
>3odg_A Xanthosine phosphorylase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; HET: XAN; 1.64A {Yersinia pseudotuberculosis} PDB: 1yqq_A* 1yqu_A* 1yr3_A*
Probab=99.95 E-value=6.4e-26 Score=195.98 Aligned_cols=224 Identities=11% Similarity=0.124 Sum_probs=160.7
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCccCCCCC----------CCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEG----------VPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISA 81 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~~----------~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~a 81 (253)
.++|+||+.+..- .+.+...... .+++... -.-.+|.|+++|++|+++. |..+. .+|-...++
T Consensus 33 ~p~igiI~GSGl~--~l~~~~~~~~--~~py~~ip~fp~stv~gh~g~l~~G~l~G~~Vv~l~-Gr~H~--~eg~~~~~~ 105 (287)
T 3odg_A 33 KPQIAFILGSGLG--DLVDQITNDT--TISYADIPGFPVSSVHGHAGELVLGDLCGVPVMCMK-GRGHF--YEGKGMSIM 105 (287)
T ss_dssp CCSEEEEECTTTG--GGGGGCEEEE--EEEGGGSTTCCCCSSTTCCCEEEEEEETTEEEEEEE-SCCCG--GGTTCGGGG
T ss_pred CCCEEEEecCChh--HhhhcccceE--EeccccCCCCCCCccCCCCceEEEEEECCEEEEEEE-CCCcc--cCCCCHHHH
Confidence 4689999988642 1222222211 1111111 1247999999999999998 82111 111222244
Q ss_pred HHHHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCC-ccCCC---CChhhh------
Q 025413 82 SLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVG-QRQAF---STPNLL------ 151 (253)
Q Consensus 82 a~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~-~~p~~---~~~~l~------ 151 (253)
+. ..++++.++++.||++|+|||++ +++++||+||+++.++++...+..+++...+| ..|.+ .|++|.
T Consensus 106 ~a-~i~~l~~lGv~~II~tgaaGgl~-~~l~~GDlVi~~d~i~~t~~~p~~g~~~~~~G~~~~~~~~~~d~~L~~~a~~a 183 (287)
T 3odg_A 106 TN-PVRTFKLMGCEFLFCTNAAGSLR-PEVLPGSVVMLKDHINTMPGTPLVGPNDDRFGPRFFSLANAYDKDLRADMAKI 183 (287)
T ss_dssp HH-HHHHHHHTTCSEEEEEEEEEESS-TTSCTTCEEEEEEEECCSSSCTTCSSCCTTTCCSSCCCTTSSCHHHHHHHHHH
T ss_pred HH-HHHHHHHcCCCEEEEecceeccC-CCCCCCCEEEehhhhhccCCCCccCCCccccCCCCCCCCccCCHHHHHHHHHH
Confidence 44 44678999999999999999999 79999999999999988865432112111122 11222 145553
Q ss_pred ---hcCcceEEEE--eeccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC--C-CccHHHH
Q 025413 152 ---RELNLKVCKL--STGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG--D-KPTAEEF 223 (253)
Q Consensus 152 ---~~~~~~~G~i--~sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~--~-~~~~~~~ 223 (253)
.+++++.|++ .+|+.|.. +.+.+.++++|+++|+||+++++++|+++|+|+++|+.|||++++ + ..+++++
T Consensus 184 A~~~gi~~~~Gvy~~~~Gp~feT-~AE~~~~r~~GadaVgMe~~pea~vA~~~gi~~~~I~~VSD~a~g~~~~~~s~eev 262 (287)
T 3odg_A 184 AQQLDIPLTEGVFVSYPGPCFET-PAEIRMMQIIGGDVVGMSVVPEVLSAAHCGLKVIALTAITNLAEGLSDVVLSHEQT 262 (287)
T ss_dssp HHHHTCCCEEEEEEECCCSSCCC-HHHHHHHHHTTCSEEESSSHHHHHHHHHHTCEEEEEEEEEEECTTSSSCCCCHHHH
T ss_pred HHHCCCCEEEEEEEEecCCccCC-HHHHHHHHHcCCEEEeCcHHHHHHHHHHcCCCEEEEEEEEccccccCCCCCCHHHH
Confidence 2578999986 57888874 444567788999999999999999999999999999999999976 2 2489999
Q ss_pred HHHHHHHHHHHHHHHHHHhHhh
Q 025413 224 MQNLVAVTAALEQSVSQVIDFI 245 (253)
Q Consensus 224 ~~~~~~aa~~~~~~l~~~l~~~ 245 (253)
.+.++++++.+.+.|.++++.+
T Consensus 263 ~~~a~~~~~~~~~ll~~~i~~~ 284 (287)
T 3odg_A 263 LKFAKVASVNFTKLIEAFLKSK 284 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999876
No 33
>1tcv_A Purine-nucleoside phosphorylase; transferase; HET: NDS; 1.75A {Schistosoma mansoni} PDB: 1tcu_A* 1td1_A 3djf_A* 3e0q_A* 3e9r_A* 3e9z_A* 3f8w_A* 3faz_A* 3fb1_A* 3fnq_A* 3iex_A*
Probab=99.95 E-value=5.8e-26 Score=196.77 Aligned_cols=226 Identities=14% Similarity=0.137 Sum_probs=152.7
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCc--------cCCCCCCCeEEEEEEECCeeEEEEecCCCCCC-CcCCcChhHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQD--------SVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSL-EVDSVGTISAS 82 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~-~~~giG~~~aa 82 (253)
.++|+||+.+... .+.+.+....... .+.+.+-.-.+|.|+++|++|+++. |+.+.| +.+ ++++++
T Consensus 26 ~p~igiI~GSGl~--~l~~~l~~~~~i~y~~ip~f~~~t~~Gh~g~l~~G~l~G~~V~~~~-G~gH~yeG~~-p~~V~~- 100 (287)
T 1tcv_A 26 VPEIGIICGSGLG--KLADGVKDKITIPYTKIPNFPQTSVVGHSGNLIFGTLSGRKVVVMQ-GRFHMYEGYS-NDTVAL- 100 (287)
T ss_dssp CCSEEEECCTTCG--GGGTTCEEEEEEEGGGSTTSCCCC---CCCEEEEEEETTEEEEEEE-SCCCGGGTCC-HHHHHH-
T ss_pred CCcEEEEcCCchh--hHHhhcceeEEEecccCCCCCCCCCCCCCceEEEEEECCEEEEEEe-cCCcccCCCC-HHHHHH-
Confidence 3579999988643 2222333322210 0111122357999999999999998 731111 112 335555
Q ss_pred HHHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccceec---cCCCCCCCccccCCC-ccCCC---CChhhh----
Q 025413 83 LVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFH---DRRIPIPVFDLYGVG-QRQAF---STPNLL---- 151 (253)
Q Consensus 83 ~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~---d~~~~~~~f~~y~~~-~~p~~---~~~~l~---- 151 (253)
..++++.++++.||++|.|||++ +++++||+||+++.+++ +...+...++...+| ..|.+ .|++|.
T Consensus 101 --~i~~l~~lGv~~iI~tgaaG~l~-~~~~~GDlVi~~d~i~~~g~t~~~~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~ 177 (287)
T 1tcv_A 101 --PIRVMKLLGVKILMVSNAAGGLN-RSLKLGDFVILKDHIYLPGLGLNNILVGPNQEAFGTRFPALSNAYDRDLRKLAV 177 (287)
T ss_dssp --HHHHHHHHTCCEEEEEEEEEECS-TTCCTTCEEEEEEEEEHHHHTTTCTTCSSCCTTTCCSSCCCTTSBCHHHHHHHH
T ss_pred --HHHHHHHcCCCEEEEecceeecC-CCCCCCCEEEEHHHhcccccCCCCCcccCCccccCCCCCCCCcccCHHHHHHHH
Confidence 46778889999999999999999 79999999999999998 654332122211122 22222 144442
Q ss_pred ---h----cCcceEEEEe--eccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC-----CC
Q 025413 152 ---R----ELNLKVCKLS--TGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG-----DK 217 (253)
Q Consensus 152 ---~----~~~~~~G~i~--sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~-----~~ 217 (253)
+ +++++.|+++ +|++|.+. ...+.+++.|+++||||+++++++|+++++|+++|+.|||++.. ..
T Consensus 178 ~~a~~~~~~~~~~~Gvy~~~~Gp~feT~-aE~~~~r~~Gad~VgMe~~~ea~vA~~~gi~~~~i~~Vtd~a~~~~~~~~~ 256 (287)
T 1tcv_A 178 QVAEENGFGNLVHQGVYVMNGGPCYETP-AECTMLLNMGCDVVGMSTIPEVVIARHCGIQVFAVSLVTNISVLDVESDLK 256 (287)
T ss_dssp HHHHHTTCGGGEEEEEEEECCCSSCCCH-HHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCTTCC--
T ss_pred HHHhhhcCCCceeeEEEEEecCCccCCH-HHHHHHHHcCCcEEcccHHHHHHHHHHCCCCEEEEEEeeccccccccCCCC
Confidence 2 3568899988 68888754 45677788899999999999999999999999999999999973 22
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhHhhc
Q 025413 218 PTAEEFMQNLVAVTAALEQSVSQVIDFIN 246 (253)
Q Consensus 218 ~~~~~~~~~~~~aa~~~~~~l~~~l~~~~ 246 (253)
.+++++.+.++++++.+.+.+.++++.+.
T Consensus 257 ~~~eev~~~~~~~~~~~~~lv~~~i~~l~ 285 (287)
T 1tcv_A 257 PNHEEVLATGAQRAELMQSWFEKIIEKLP 285 (287)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 48899999999999999999999998874
No 34
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=99.94 E-value=9.7e-26 Score=193.58 Aligned_cols=214 Identities=16% Similarity=0.142 Sum_probs=161.5
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccc-cC----ccCCCC----CCCeEEEEEEECCeeEEEEecCCCCCCCcCCcC-----
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKE-DQ----DSVFPE----GVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVG----- 77 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~-~~----~~~~~~----~~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG----- 77 (253)
.++|+||+.+..- .+.+.+.... .. .+-||. +-.-.+|.|+++|++|+++. | +|
T Consensus 27 ~~~igiI~GSGl~--~~~~~~~~~~v~~py~~~p~fp~~tv~gh~~~~~~G~l~G~~V~~~~-G---------~gh~~~~ 94 (268)
T 1g2o_A 27 EHDVAVVLGSGWL--PAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLA-G---------RIHAYEG 94 (268)
T ss_dssp CCSEEEEECTTCG--GGSGGGCCCSEEEEGGGSTTCCCCCSTTCCCEEEEEEETTEEEEEEE-C---------CCCGGGT
T ss_pred CCCEEEEcCCchh--hhHHhhccceeEeecccCCCCCCCcccCCCCeEEEEEECCEEEEEEE-C---------CCcCCCC
Confidence 4689999988632 1223333322 11 011111 11347999999999999885 8 55
Q ss_pred -hhHHHHHHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCC---CChhhhh-
Q 025413 78 -TISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAF---STPNLLR- 152 (253)
Q Consensus 78 -~~~aa~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~---~~~~l~~- 152 (253)
++++..+..++++.++++.||++|.|||++ +++++||+||+++.++++.... |. + ...|.+ .|++|..
T Consensus 95 ~~v~~~~a~i~~l~~lGv~~iI~tgaaG~l~-~~l~~GDlVi~~d~i~~t~~~~---~~-g--~~~~~~~~~~d~~L~~~ 167 (268)
T 1g2o_A 95 HDLRYVVHPVRAARAAGAQIMVLTNAAGGLR-ADLQVGQPVLISDHLNLTARSP---LV-G--GEFVDLTDAYSPRLREL 167 (268)
T ss_dssp CCHHHHSHHHHHHHHTTCCEEEEEEEEEECS-TTCCTTCEEEEEEEEECSSCCS---CC-S--SCCCCCTTSSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecceecCC-CCCCCCCEEEEhHHhhccCCCc---CC-C--CCCCCCCcccCHHHHHH
Confidence 777666667888999999999999999999 7999999999999999987532 22 1 111222 2455541
Q ss_pred ----cCcceEEE--EeeccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC---CCccHHHH
Q 025413 153 ----ELNLKVCK--LSTGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG---DKPTAEEF 223 (253)
Q Consensus 153 ----~~~~~~G~--i~sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~---~~~~~~~~ 223 (253)
.-.++.|+ +.+|++|... ++.+.++++|+++||||+++++++|+++|+|+++|+.|||++++ ...+++++
T Consensus 168 ~~~~a~~~~~Gvy~~~~Gp~feT~-aE~~~~~~~GadaVgMe~~~ea~lA~~~gi~~~~i~~VtD~a~g~~~~~~s~eev 246 (268)
T 1g2o_A 168 ARQSDPQLAEGVYAGLPGPHYETP-AEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGITGEPLSHAEV 246 (268)
T ss_dssp HHHHCTTCEEEEEEECCCSSCCCH-HHHHHHHHHTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECTTSSCCCCCHHHH
T ss_pred HHHHHHHhCCCeEEEEeCCEEeCH-HHHHHHHHcCCeEEecCHHHHHHHHHHcCCCEEEEEEEecCccccCCCCCCHHHH
Confidence 12278897 8888898754 55677788899999999999999999999999999999999965 23489999
Q ss_pred HHHHHHHHHHHHHHHHHHhHhh
Q 025413 224 MQNLVAVTAALEQSVSQVIDFI 245 (253)
Q Consensus 224 ~~~~~~aa~~~~~~l~~~l~~~ 245 (253)
.+.+++++..+.+.+.++++.+
T Consensus 247 ~~~~~~~~~~~~~lv~~~i~~~ 268 (268)
T 1g2o_A 247 LAAGAASATRMGALLADVIARF 268 (268)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999988764
No 35
>3fuc_A Purine nucleoside phosphorylase; recombinant, glycosyltransferase, transferase, 9-deazaguanine, multisubstrate analogue inhibitors, nucleoside-binding; HET: 9D9 9DG; 1.45A {Bos taurus} SCOP: c.56.2.1 PDB: 1b8n_A* 1b8o_A* 2ai2_A* 1v48_A* 2ai1_A* 2ai3_A* 1lvu_A* 1lv8_A* 1a9o_A 1a9p_A* 1a9s_A* 1fxu_A* 2qpl_A* 1a9t_A* 3pnp_A 1pbn_A 4pnp_A 1a9q_A* 1a9r_A* 1vfn_A* ...
Probab=99.94 E-value=1.6e-24 Score=187.19 Aligned_cols=223 Identities=18% Similarity=0.164 Sum_probs=160.1
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCcc----CCC----CCCCeEEEEEEECCeeEEEEecCCCCCC-CcCCcChhHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQDS----VFP----EGVPWVRYHGTYKDLHLNIIWPGKDTSL-EVDSVGTISAS 82 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~----~~~----~~~~~~~~~g~~~g~~v~l~~~G~~~~~-~~~giG~~~aa 82 (253)
.++|+||+.+..- .+.+.+.......+ -|| .+-.-+++.|+++|++|+++. |+.+.+ +.+ +++++++
T Consensus 24 ~p~igiI~GSGl~--~l~~~~~~~~~~~y~~ipgfp~stv~gh~g~l~~G~l~G~~Vv~~~-Gr~H~yeg~~-~~~v~~~ 99 (284)
T 3fuc_A 24 RPQVAVICGSGLG--GLVNKLTQAQTFDYSEIPNFPESTVPGHAGRLVFGILNGRACVMMQ-GRFHMYEGYP-FWKVTFP 99 (284)
T ss_dssp CCSEEEEECTTCG--GGGGGCEEEEEEEGGGSTTCC--------CEEEEEEETTEEEEEEE-SCCCGGGTCC-HHHHTHH
T ss_pred CCcEEEEecCchh--HhhhhccCcEEEeccCCCCCCCCCccCCcccEEEEEECCEEEEEEe-CCccccCCCC-hHHHHHH
Confidence 3689999988742 23334433322111 111 011237999999999999996 732222 122 5666666
Q ss_pred HHHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccC--CCCCCCccccC---CC-ccCCC---CChhhh--
Q 025413 83 LVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDR--RIPIPVFDLYG---VG-QRQAF---STPNLL-- 151 (253)
Q Consensus 83 ~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~--~~~~~~f~~y~---~~-~~p~~---~~~~l~-- 151 (253)
. ++++.++++.||++|.|||++ +++++||+||+++.++++. +.. | |..+. +| ..|.+ .|++|.
T Consensus 100 ~---~~l~~lGv~~iI~tgaaGgl~-~~~~~GDlVi~~d~i~~t~~~~~~-~-~~g~~~~~~g~~~~~~~~~~d~~L~~~ 173 (284)
T 3fuc_A 100 V---RVFRLLGVETLVVTNAAGGLN-PNFEVGDIMLIRDHINLPGFSGEN-P-LRGPNEERFGVRFPAMSDAYDRDMRQK 173 (284)
T ss_dssp H---HHHHHHTCCEEEEEEEEEECS-TTCCTTCEEEEEEEEEHHHHTTCC-T-TCSSCCTTTCCSSCCCTTCSCHHHHHH
T ss_pred H---HHHHHcCCCEEEEecceecCC-CCCCCCCEEEehHHhcccCCcCCC-C-CcCccccccCCCcCCCCcCCCHHHHHH
Confidence 4 478999999999999999999 7999999999999998862 211 1 11111 11 11221 145553
Q ss_pred -------hcCc--ceEEE--EeeccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC----C
Q 025413 152 -------RELN--LKVCK--LSTGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG----D 216 (253)
Q Consensus 152 -------~~~~--~~~G~--i~sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~----~ 216 (253)
.+++ ++.|+ +.+|++|.. +.+.+.+++.|+++|+||+++++++|+++++|+++|+.|||++.. +
T Consensus 174 ~~~~a~~~gi~~~~~~Gvy~~~~Gp~feT-~AE~~~~r~~Gad~VgMe~~pea~lAr~~gi~~~~I~~VTd~a~~~~~~~ 252 (284)
T 3fuc_A 174 AHSTWKQMGEQRELQEGTYVMLGGPNFET-VAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESQ 252 (284)
T ss_dssp HHHHHHHHTCSSCCEEEEEEECCCSSCCC-HHHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCSSCC
T ss_pred HHHHHHHcCCCcceEeeEEEEecCCEEcC-HHHHHHHHHcCCcEEecCHHHHHHHHHHcCCCEEEEEEEecccccccCCC
Confidence 2566 88998 568899975 444567888999999999999999999999999999999999962 2
Q ss_pred C-ccHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 025413 217 K-PTAEEFMQNLVAVTAALEQSVSQVIDFI 245 (253)
Q Consensus 217 ~-~~~~~~~~~~~~aa~~~~~~l~~~l~~~ 245 (253)
. .+++++.+.+++++..+.+.|.++++.+
T Consensus 253 ~~~s~eev~~~~~~~~~~~~~l~~~~i~~l 282 (284)
T 3fuc_A 253 GKANHEEVLEAGKQAAQKLEQFVSLLMASI 282 (284)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHGGGS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 4899999999999999999999999876
No 36
>1qe5_A Pentosyltransferase; enzyme, purine nucleoside phosphorylase; 2.20A {Cellulomonas SP} SCOP: c.56.2.1 PDB: 1c3x_A
Probab=99.93 E-value=5.1e-25 Score=188.90 Aligned_cols=215 Identities=14% Similarity=0.104 Sum_probs=157.8
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccc-cCccCCCCCCCe--EEEEEEECC-----eeEEEEecCCCCCC-CcCCcChhHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKE-DQDSVFPEGVPW--VRYHGTYKD-----LHLNIIWPGKDTSL-EVDSVGTISAS 82 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~-~~~~~~~~~~~~--~~~~g~~~g-----~~v~l~~~G~~~~~-~~~giG~~~aa 82 (253)
.++|+||+.+..- .+.+.+.... ... +....++ .++.|+++| ++|+++. |+.+.| +.+ +++++++
T Consensus 29 ~p~igiI~GSGl~--~l~~~~~~~~v~~~--y~~ipg~p~~l~~G~l~G~~~~~~~Vv~~~-Gr~h~yeg~~-p~~V~a~ 102 (266)
T 1qe5_A 29 GHDMALVLGSGWG--GAAELLGEVVAEVP--THEIPGFSSVTRSIRVERADGSVRHALVLG-SRTHLYEGKG-VRAVVHG 102 (266)
T ss_dssp CCSEEEECCTTCT--TTTTTSCEEEEEEE--GGGSTTCCCEEEEEEEECTTSCEEEEEECC-SCCCGGGSSC-HHHHSHH
T ss_pred CCCEEEEeCCchh--hhHhhhccceEEEe--cCCCCCCCeEEEEEEECCcCCCceEEEEEE-CCccccCCCC-HHHHHHH
Confidence 3679999988632 2223443333 111 1111112 799999999 9999884 743322 223 6777753
Q ss_pred HHHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCCccCCC---CChhhhh-----cC
Q 025413 83 LVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAF---STPNLLR-----EL 154 (253)
Q Consensus 83 ~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~~~p~~---~~~~l~~-----~~ 154 (253)
. ++++.++++.||++|.||||+ +++++||+||+++.++++.+.+ |.. ...|.+ .|++|.. .-
T Consensus 103 i---~~l~~lGv~~iI~tgaaG~l~-~~l~~GDlVi~~d~i~~t~~~~---~~g---~~~~~~~~~~d~~L~~~~~~~a~ 172 (266)
T 1qe5_A 103 V---RTAAATGAETLILTNGCGGLN-QEWGAGTPVLLSDHINLTARSP---LEG---PTFVDLTDVYSPRLRELAHRVDP 172 (266)
T ss_dssp H---HHHHHTTCCEEEEEEEEEECC-TTSCTTCEEEEEEEEECSSCCS---CCS---SCCCCCTTSBCHHHHHHHHHHCT
T ss_pred H---HHHHHcCCCEEEEecceecCC-CCCCCCCEEEEhHHhhhCCCCC---CCC---CCCCCCCcccCHHHHHHHHHHHH
Confidence 3 678899999999999999999 7999999999999999987632 321 112222 2455532 12
Q ss_pred cceEEEE--eeccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC---CCccHHHHHHHHHH
Q 025413 155 NLKVCKL--STGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG---DKPTAEEFMQNLVA 229 (253)
Q Consensus 155 ~~~~G~i--~sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~---~~~~~~~~~~~~~~ 229 (253)
.++.|+. .+|++|... ++.+.++++|+++||||+++++++|+++++|+++|+.|||++.+ +..+++++.+.+++
T Consensus 173 ~~~~Gvy~~~~Gp~feT~-aE~~~~r~~Gad~VgMe~~pea~lAr~~gi~~~~i~~Vtd~a~g~~~~~~s~eev~~~~~~ 251 (266)
T 1qe5_A 173 TLPEGVYAQFPGPHYETP-AEVRMAGILGADLVGMSTTLEAIAARHCGLEVLGVSLVTNLAAGISPTPLSHAEVIEAGQA 251 (266)
T ss_dssp TCCEEEEEECCCSSCCCH-HHHHHHHHHTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECTTTCSSCCCHHHHHHHHHH
T ss_pred HhCCCeEEEeeCCEEeCH-HHHHHHHHcCCeEEecChHHHHHHHHHCCCCEEEEEEEecCccccCCCCCCHHHHHHHHHH
Confidence 5778875 688888754 55677788899999999999999999999999999999999965 23589999999999
Q ss_pred HHHHHHHHHHHHhH
Q 025413 230 VTAALEQSVSQVID 243 (253)
Q Consensus 230 aa~~~~~~l~~~l~ 243 (253)
+++.+.+.|.++++
T Consensus 252 ~~~~~~~ll~~~i~ 265 (266)
T 1qe5_A 252 AGPRISALLADIAK 265 (266)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999888875
No 37
>3khs_A Purine nucleoside phosphorylase; alpha-beta structure, mixed beta-barrel, hydrolase; 2.38A {Grouper iridovirus} SCOP: c.56.2.0
Probab=99.93 E-value=1.2e-24 Score=188.21 Aligned_cols=229 Identities=15% Similarity=0.125 Sum_probs=152.5
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCcc--------CCCCCCCeEEEEEEECCeeEEEEecCCCCCC-CcCCcChhHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQDS--------VFPEGVPWVRYHGTYKDLHLNIIWPGKDTSL-EVDSVGTISAS 82 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~--------~~~~~~~~~~~~g~~~g~~v~l~~~G~~~~~-~~~giG~~~aa 82 (253)
.++|+||+.+..- .+.+.+.......+ +.+.+-.-.++.|+++|++|+++. |+.+.| +.+ +.+++++
T Consensus 21 ~p~igiI~GSGl~--~l~~~~~~~~~~~y~~ip~f~~~t~~Gh~g~l~~G~l~G~~Vv~~~-GrgH~yeg~~-~~~v~~~ 96 (285)
T 3khs_A 21 RPVLGIVCGSGLG--KIGDSLETSITVAYSDIPNFPVGSVKGHAGSLIFGSVNGVSCVCMK-GRFHLYEGHT-AARATFP 96 (285)
T ss_dssp CCCEEEEECTTCG--GGGGGCEEEEEEEGGGSTTCC-------CCEEEEEEETTEEEEEEE-SCCCGGGTCC-HHHHTHH
T ss_pred CCcEEEEecCchh--hhhhhhcCcEEEeccccCCCCCCCCCCCCCceEEEEECCEEEEEEe-CCCcccCCCC-hHHhHHH
Confidence 4689999988632 22233332221100 011112237999999999999996 832211 111 3366664
Q ss_pred HHHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccC--C-CCCCCccccCCC-ccCCC---CChhhh----
Q 025413 83 LVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDR--R-IPIPVFDLYGVG-QRQAF---STPNLL---- 151 (253)
Q Consensus 83 ~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~--~-~~~~~f~~y~~~-~~p~~---~~~~l~---- 151 (253)
.++++.++++.||++|.|||++ +++++||+||+++.++++. + .+..+++...+| ..|.+ .|++|.
T Consensus 97 ---i~~l~~lGv~~iI~tgaaGgl~-~~~~~GDlVi~~d~id~t~~~~~~pl~g~~~~~~g~~~~~~~~~yd~~L~~~~~ 172 (285)
T 3khs_A 97 ---MRVFKALGVKIVVLTNAAGGLN-PSYRPGDFMVVRDHINLPGLAGANPLTGPNDDTEGERFPSMTSVYDKTLRKYAI 172 (285)
T ss_dssp ---HHHHHHTTCCEEEEEEEEEECS-TTCCTTCEEEEEEEEEHHHHTTCCTTCSCCCTTTSCSSCCCTTCBCHHHHHHHH
T ss_pred ---HHHHHHcCCCEEEEecceecCC-CCCCCCCEEeehheEecccccCCCCCcCccccccCCCCCCcCccCCHHHHHHHH
Confidence 4588999999999999999999 7999999999999997641 1 111011111122 11222 145553
Q ss_pred -----hcCc--ceEEEE--eeccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC----CC-
Q 025413 152 -----RELN--LKVCKL--STGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG----DK- 217 (253)
Q Consensus 152 -----~~~~--~~~G~i--~sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~----~~- 217 (253)
.+++ ++.|+. .+|++|... .+.+.+++.|+++|+||+++++++|+++++|+++|+.|||++.+ +.
T Consensus 173 ~~a~~~gi~~~~~~Gvy~~~~Gp~feT~-AE~~~~r~~Gad~VgMe~~pea~lAr~~gi~~~~i~~VTd~a~g~~~~~~~ 251 (285)
T 3khs_A 173 SAARELGMSYATHEGVYCCVNGPSFETP-AECKILRLMGSDAVGMSTAPETIVAKHGGMRCLAVSLISNVIASNCETPAE 251 (285)
T ss_dssp HHHHHHTCGGGEEEEEEEECCCSSCCCH-HHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCTTCC----
T ss_pred HHHHHcCCCcceeeEEEEEecCCEEeCH-HHHHHHHHcCCcEEeccHHHHHHHHHHCCCCEEEEEEEeccccccccCCCC
Confidence 2466 889974 688999754 44567788999999999999999999999999999999999964 22
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhHhhcccc
Q 025413 218 PTAEEFMQNLVAVTAALEQSVSQVIDFINGKR 249 (253)
Q Consensus 218 ~~~~~~~~~~~~aa~~~~~~l~~~l~~~~~~~ 249 (253)
.+++++.+.++++++.+.+.|.++++.+..+.
T Consensus 252 ~s~~ev~~~~~~~~~~~~~lv~~~i~~l~~~~ 283 (285)
T 3khs_A 252 PTHEEVLRAGEEASARMTALVKLVIEKIRGEL 283 (285)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 38899999999999999999999999987543
No 38
>3la8_A SMU.1229, putative purine nucleoside phosphorylase; PUNA, glycosyltransferase, transferase; 1.80A {Streptococcus mutans} PDB: 3lba_A*
Probab=99.93 E-value=1.8e-24 Score=187.17 Aligned_cols=223 Identities=15% Similarity=0.118 Sum_probs=154.7
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCc----cCCC----CCCCeEEEEEEECCeeEEEEecCCCCCC-CcCCcChhHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQD----SVFP----EGVPWVRYHGTYKDLHLNIIWPGKDTSL-EVDSVGTISAS 82 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~----~~~~----~~~~~~~~~g~~~g~~v~l~~~G~~~~~-~~~giG~~~aa 82 (253)
.++|+||+.+..- .+.+.+....... +-|| .+-.-+++.|+++|++|+++. |..+.| +.+ +++++++
T Consensus 55 ~p~igiI~GSGl~--~l~~~~~~~~~i~y~~ip~fp~stv~Gh~g~l~~G~l~G~~Vv~~~-Gr~H~yEG~~-p~~V~~~ 130 (303)
T 3la8_A 55 KPEFGLILGSGLG--ELAEEIENALVLNYADIPNWGRSTVSGHAGKLIYGELAGRKVLALQ-GRFHYYEGNS-MELVTFP 130 (303)
T ss_dssp CCSEEEECCTTCG--GGGGGCEEEEEEEGGGSTTCC---------EEEEEEETTEEEEEEC--CCCGGGC-C-HHHHHHH
T ss_pred CCeEEEEccCcHh--HHHhhccCcEEEecccCCCCCCCCCCCCcCceEEEEECCEEEEEEe-cCcccccCCC-HHHHHHH
Confidence 4689999887632 2223333322211 0011 111246999999999999998 632222 223 6778875
Q ss_pred HHHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccCCCCCCCccccCCC-ccCCC---CChhhh-------
Q 025413 83 LVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVG-QRQAF---STPNLL------- 151 (253)
Q Consensus 83 ~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~~~~~~~f~~y~~~-~~p~~---~~~~l~------- 151 (253)
.++++.++++.||++|.||||+ +++||+||+++.++++...+..+++.+.+| ..|.+ .|++|.
T Consensus 131 ---i~~l~~lGv~~II~t~aaGgL~---l~~GDlVi~~d~I~~t~~~pl~g~~~~~~G~~f~~m~~~yd~~Lr~~a~~aA 204 (303)
T 3la8_A 131 ---IRIMKALGCQGLIVTNAAGGIG---FGPGTLMAISDHINLTGANPLMGENLDDFGFRFPDMSNAYTADYREVAHQVA 204 (303)
T ss_dssp ---HHHHHHHTCCEEEEEEEEEESS---SCTTEEEEEEEEEECSSCCTTCC-CCGGGCCCSCCCTTSSCHHHHHHHHHHH
T ss_pred ---HHHHHHcCCCEEEEecceeccc---cCCCcEEEEhhHhhhcCCCCCcCCcccccCCCcCCCCcccCHHHHHHHHHHH
Confidence 4688999999999999999997 999999999999998876443223222333 11221 144553
Q ss_pred --hcCcceEEEE--eeccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC-C-CccHHHHHH
Q 025413 152 --RELNLKVCKL--STGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG-D-KPTAEEFMQ 225 (253)
Q Consensus 152 --~~~~~~~G~i--~sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~-~-~~~~~~~~~ 225 (253)
.+++++.|++ .+||+|.+. .+.+.+++.|+++|+||+++++++|+++++|+++|+.|||++.+ + ..+++++.+
T Consensus 205 ~~~gi~~~~Gvy~~~~GP~FeT~-AE~r~~r~~GadaVgMst~pEa~vAre~gi~~~~Is~ITD~a~g~~~~vs~eevl~ 283 (303)
T 3la8_A 205 DKIGIKLDEGVYIGVSGPSYETP-AEIRAFKTLGADAVGMSTVPEVIVAVHSGLKVLGISAITNYAAGFQSELNHEEVVA 283 (303)
T ss_dssp HHHTCCCEEEEEEECCCSSCCCH-HHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECTTC---------CC
T ss_pred HHcCCceEEEEEEEeeCCccCCH-HHHHHHHHcCCCEEeccHHHHHHHHHHcCCCEEEEEEEeecCCCCCCCCCHHHHHH
Confidence 2578899985 799999754 44567888999999999999999999999999999999999975 2 348999999
Q ss_pred HHHHHHHHHHHHHHHHhHhh
Q 025413 226 NLVAVTAALEQSVSQVIDFI 245 (253)
Q Consensus 226 ~~~~aa~~~~~~l~~~l~~~ 245 (253)
.+++++..+.+.|.++++.+
T Consensus 284 ~a~~~~~~~~~ll~~~i~~~ 303 (303)
T 3la8_A 284 VTQQIKEDFKGLVKAILVEL 303 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999998764
No 39
>3phb_E Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.30A {Homo sapiens}
Probab=99.93 E-value=4.8e-24 Score=186.39 Aligned_cols=227 Identities=18% Similarity=0.137 Sum_probs=161.4
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCc----cCCC----CCCCeEEEEEEECCeeEEEEecCCCCCC-CcCCcChhHHH
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQD----SVFP----EGVPWVRYHGTYKDLHLNIIWPGKDTSL-EVDSVGTISAS 82 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~----~~~~----~~~~~~~~~g~~~g~~v~l~~~G~~~~~-~~~giG~~~aa 82 (253)
.++|+||+.+..- .+.+.+....... +-|| .+-.-.++.|+++|++|+++. |+.+.+ +.+ +++++++
T Consensus 59 ~p~igiI~GSGL~--~l~~~~~~~~~i~y~~ipgfp~stv~Ghsg~l~~G~l~G~~Vv~m~-Gr~H~yeG~~-~~~V~~~ 134 (324)
T 3phb_E 59 RPQVAIICGSGLG--GLTDKLTQAQIFDYSEIPNFPRSTVPGHAGRLVFGFLNGRACVMMQ-GRFHMYEGYP-LWKVTFP 134 (324)
T ss_dssp CCSEEEEECTTCG--GGGTTCEEEEEEEGGGSTTCCCCCSTTCCCEEEEEEETTEEEEEEE-SCCCGGGTCC-HHHHTHH
T ss_pred CCcEEEEecCcHH--HHHhhccCcEEEecccCCCCCCCCCCCCcCceEEEEECCEEEEEEe-CCccccCCCC-hHHHHHH
Confidence 3689999988632 2323333322111 0111 112347999999999999996 732222 223 6677766
Q ss_pred HHHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccceeccC--C-CCCCCccccCCC-ccCCC---CChhhh----
Q 025413 83 LVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDR--R-IPIPVFDLYGVG-QRQAF---STPNLL---- 151 (253)
Q Consensus 83 ~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~~~d~--~-~~~~~f~~y~~~-~~p~~---~~~~l~---- 151 (253)
. ++++.++++.||++|.||||+ +++++||+||+++.++++. + .+.-+++.-.+| ..|.+ .|++|.
T Consensus 135 ~---~ll~~lGv~~II~tgaaGgL~-~~l~~GDlVi~~d~Id~t~~~~~~pl~G~~~~~~g~~~~~m~~~yd~~Lr~~a~ 210 (324)
T 3phb_E 135 V---RVFHLLGVDTLVVTNAAGGLN-PKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRAL 210 (324)
T ss_dssp H---HHHHHHTCCEEEEEEEEEECS-TTCCTTCEEEEEEEEEHHHHHTCCTTCSSCCTTTCCSSCBCTTCSCHHHHHHHH
T ss_pred H---HHHHHcCCCEEEEecceeecC-CCCCCCCEEEEhhHccCcCCcCCCCCcCCCccccCCCcCccCCCCCHHHHHHHH
Confidence 4 478999999999999999999 7999999999999998752 1 111011100111 11211 145553
Q ss_pred -----hcCc--ceEEE--EeeccccccChHhHHHHHhCCCeEEecchHHHHHHHHhCCCCEEEEEEeecCCCC----CC-
Q 025413 152 -----RELN--LKVCK--LSTGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG----DK- 217 (253)
Q Consensus 152 -----~~~~--~~~G~--i~sgd~~~~~~~~~~~l~~~~~~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~----~~- 217 (253)
.+++ ++.|+ +.+|++|.. +.+.+.+++.|+++|+||+++++++|+++++|+++|+.|||++.. +.
T Consensus 211 ~aA~~~gi~~~~~~Gvy~~~~GP~FeT-~AE~r~~r~~GadaVgMet~pEa~vAr~~gi~~~~Is~VTD~a~~~~~~~~~ 289 (324)
T 3phb_E 211 STWKQMGEQRELQEGTYVMVAGPSFET-VAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESLEK 289 (324)
T ss_dssp HHHTTSCCSSCCEEEEEEECCCSSCCC-HHHHHHHHHHTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCSSCCCC
T ss_pred HHHHHcCCCceEeceEEEEecCCEEeC-HHHHHHHHHcCCcEEecChHHHHHHHHHCCCCEEEEEEEecccccccCCCCC
Confidence 1455 78897 578899975 444567778899999999999999999999999999999999962 22
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhHhhcc
Q 025413 218 PTAEEFMQNLVAVTAALEQSVSQVIDFING 247 (253)
Q Consensus 218 ~~~~~~~~~~~~aa~~~~~~l~~~l~~~~~ 247 (253)
.+++++.+.++++++.+.+.|.++|+.+..
T Consensus 290 vs~eevl~~a~~~~~~~~~Lv~~~i~~l~~ 319 (324)
T 3phb_E 290 ANHEEVLAAGKQAAQKLEQFVSILMASIPL 319 (324)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 489999999999999999999999998863
No 40
>2ebj_A Pyrrolidone carboxyl peptidase; TTHA08 degradation of proteins and peptides, structural genomics; 1.90A {Thermus thermophilus}
Probab=74.67 E-value=7.5 Score=30.81 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHcCCCEEEEEeeecccC
Q 025413 79 ISASLVTYASIQALKPDLIINAGTAGGFK 107 (253)
Q Consensus 79 ~~aa~~~~~li~~~~~~~vi~~G~aG~l~ 107 (253)
..+...+.+++++++||.||.+|.+|+-.
T Consensus 43 ~~~~~~l~~~~~~~~pd~vi~~G~a~~r~ 71 (192)
T 2ebj_A 43 AEALGEALEDLHREGPKAVLHLGLAEDRP 71 (192)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEEECTTCS
T ss_pred ccHHHHHHHHHHHhCCCEEEEeccCCCCc
Confidence 55556778888889999999999999976
No 41
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=74.51 E-value=8.1 Score=31.23 Aligned_cols=35 Identities=17% Similarity=0.288 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEEeeecccCCCCCCcccE
Q 025413 80 SASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDV 116 (253)
Q Consensus 80 ~aa~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdv 116 (253)
.+...+.+++++++|+.||++|.+||-. .+.+=-+
T Consensus 49 ~~~~~l~~~i~~~~Pd~Vi~vG~a~gr~--~i~lEr~ 83 (215)
T 3giu_A 49 KVDNIINKTLASNHYDVVLAIGQAGGRN--AITPERV 83 (215)
T ss_dssp HHHHHHHHHHHHSCCSEEEEEEECTTCC--SBEEBCE
T ss_pred hHHHHHHHHHHHhCCCEEEEeccCCCCc--eEEEEEE
Confidence 3445567788889999999999999965 3444333
No 42
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=69.95 E-value=11 Score=30.34 Aligned_cols=27 Identities=33% Similarity=0.628 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHcCCCEEEEEeeecccC
Q 025413 81 ASLVTYASIQALKPDLIINAGTAGGFK 107 (253)
Q Consensus 81 aa~~~~~li~~~~~~~vi~~G~aG~l~ 107 (253)
+...+..++++++|+.||++|.+||-.
T Consensus 50 ~~~~l~~~i~~~~Pd~vi~~G~a~gr~ 76 (216)
T 4gxh_A 50 SLEHLYAAVDKYQPELVISVGQAGGRT 76 (216)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTCS
T ss_pred HHHHHHHHHHhhCCCEEEEeccCCCCC
Confidence 444567788889999999999999976
No 43
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=68.65 E-value=12 Score=32.91 Aligned_cols=24 Identities=38% Similarity=0.445 Sum_probs=16.6
Q ss_pred cccCeEEEEEcchHhHH---HHHHhcC
Q 025413 10 EAISSVVIIIAMQTEAM---PLVNKFE 33 (253)
Q Consensus 10 ~~~~~i~Ii~Al~~E~~---~~~~~l~ 33 (253)
|++++|++|+....|.- ++++.+.
T Consensus 25 m~~~kI~~v~Gtr~~~~~~a~li~~l~ 51 (403)
T 3ot5_A 25 MAKIKVMSIFGTRPEAIKMAPLVLALE 51 (403)
T ss_dssp -CCEEEEEEECSHHHHHHHHHHHHHHH
T ss_pred cccceEEEEEecChhHHHHHHHHHHHH
Confidence 55558999999998855 5555554
No 44
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=67.89 E-value=13 Score=30.26 Aligned_cols=27 Identities=33% Similarity=0.628 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHcCCCEEEEEeeecccC
Q 025413 81 ASLVTYASIQALKPDLIINAGTAGGFK 107 (253)
Q Consensus 81 aa~~~~~li~~~~~~~vi~~G~aG~l~ 107 (253)
+...+.+++++++|+.||.+|.+|+-.
T Consensus 71 ~~~~l~~~i~~~~Pd~VihvG~aggr~ 97 (228)
T 4hps_A 71 SLEHLYAAVDKYQPELVISVGQAGGRT 97 (228)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTCS
T ss_pred HHHHHHHHHHhhCCCEEEEeccCCCCc
Confidence 344556778889999999999999976
No 45
>1x10_A Pyrrolidone-carboxylate peptidase; stability of protein, hydrolase; 2.00A {Pyrococcus furiosus} PDB: 1z8t_A 1z8x_A 1ioi_A 1x12_A 1z8w_A 2eo8_A 1iof_A 2df5_A
Probab=67.87 E-value=12 Score=29.93 Aligned_cols=27 Identities=33% Similarity=0.493 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHcCCCEEEEEeeecccC
Q 025413 81 ASLVTYASIQALKPDLIINAGTAGGFK 107 (253)
Q Consensus 81 aa~~~~~li~~~~~~~vi~~G~aG~l~ 107 (253)
+...+.+++++++|+.||.+|.+|+-.
T Consensus 48 ~~~~l~~~~~~~~pd~vi~vG~a~gr~ 74 (208)
T 1x10_A 48 AKEVLEKTLEEIKPDIAIHVGLAPGRS 74 (208)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTCC
T ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCc
Confidence 344667788889999999999999976
No 46
>1a2z_A Pyrrolidone carboxyl peptidase; N-pyroglutamate hydrolysis; 1.73A {Thermococcus litoralis} SCOP: c.56.4.1
Probab=67.65 E-value=14 Score=29.94 Aligned_cols=28 Identities=25% Similarity=0.503 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEEeeecccC
Q 025413 80 SASLVTYASIQALKPDLIINAGTAGGFK 107 (253)
Q Consensus 80 ~aa~~~~~li~~~~~~~vi~~G~aG~l~ 107 (253)
.+...+.+++++++|+.||++|.+|+-.
T Consensus 48 ~~~~~l~~~i~~~~Pd~Vi~vG~aggr~ 75 (220)
T 1a2z_A 48 RATIELKRYLEEIKPEIVINLGLAPTYS 75 (220)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEEECTTCS
T ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCc
Confidence 3445667788889999999999999976
No 47
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=63.21 E-value=19 Score=31.36 Aligned_cols=25 Identities=32% Similarity=0.610 Sum_probs=17.3
Q ss_pred ccccCeEEEEEcchHhHH---HHHHhcC
Q 025413 9 QEAISSVVIIIAMQTEAM---PLVNKFE 33 (253)
Q Consensus 9 ~~~~~~i~Ii~Al~~E~~---~~~~~l~ 33 (253)
+|.+++|++|+....|.- ++++.+.
T Consensus 22 ~~~m~ki~~v~Gtr~~~~~~a~li~~l~ 49 (396)
T 3dzc_A 22 SNAMKKVLIVFGTRPEAIKMAPLVQQLC 49 (396)
T ss_dssp --CCEEEEEEECSHHHHHHHHHHHHHHH
T ss_pred hCCCCeEEEEEeccHhHHHHHHHHHHHH
Confidence 366789999999998865 4555543
No 48
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=60.96 E-value=8.2 Score=31.19 Aligned_cols=27 Identities=37% Similarity=0.503 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHcCCCEEEEEeeecccC
Q 025413 81 ASLVTYASIQALKPDLIINAGTAGGFK 107 (253)
Q Consensus 81 aa~~~~~li~~~~~~~vi~~G~aG~l~ 107 (253)
+...+.+++++++|+.||++|.+|+-.
T Consensus 49 ~~~~l~~~~~~~~Pd~VihvG~aggr~ 75 (215)
T 3lac_A 49 SISVLKEYIEELAPEFIICIGQAGGRP 75 (215)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTCS
T ss_pred HHHHHHHHHHhhCCCeEEEeccCCCCc
Confidence 334567788889999999999999965
No 49
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=60.74 E-value=8.3 Score=31.37 Aligned_cols=34 Identities=29% Similarity=0.401 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHcCCCEEEEEeeecccCCCCCCcccE
Q 025413 81 ASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDV 116 (253)
Q Consensus 81 aa~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdv 116 (253)
+...+.+++++++|+.||.+|.+||-. .+.+=-+
T Consensus 50 ~~~~l~~~i~~~~Pd~VihvG~aggr~--~i~lEr~ 83 (223)
T 3ro0_A 50 SLAVLREAMKKHQPDIIICVGQAGGRM--QITPERV 83 (223)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTCC--SBEEBSE
T ss_pred HHHHHHHHHHHhCCCEEEEeccCCCCc--eEEEEEE
Confidence 445567788889999999999999975 3444333
No 50
>1iu8_A Pyrrolidone-carboxylate peptidase; hydrolase, thiol protease, complete proteome; 1.60A {Pyrococcus horikoshii} SCOP: c.56.4.1
Probab=60.06 E-value=8.8 Score=30.78 Aligned_cols=27 Identities=30% Similarity=0.416 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHcCCCEEEEEeeecccC
Q 025413 81 ASLVTYASIQALKPDLIINAGTAGGFK 107 (253)
Q Consensus 81 aa~~~~~li~~~~~~~vi~~G~aG~l~ 107 (253)
+...+.+++++++||.||.+|.+||-.
T Consensus 45 ~~~~l~~~~~~~~Pd~vi~vG~a~gr~ 71 (206)
T 1iu8_A 45 AREKLLKVLDDVRPDITINLGLAPGRT 71 (206)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTCS
T ss_pred HHHHHHHHHHHhCCCEEEEcccCCCCc
Confidence 444567788889999999999999976
No 51
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=38.85 E-value=94 Score=21.80 Aligned_cols=48 Identities=8% Similarity=-0.090 Sum_probs=28.3
Q ss_pred CcChhH-HHHHHHHHHHHcCCCEEEEEeeecccCCCCCCcccEEEeccce
Q 025413 75 SVGTIS-ASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVA 123 (253)
Q Consensus 75 giG~~~-aa~~~~~li~~~~~~~vi~~G~aG~l~~~~~~~Gdvvi~~~~~ 123 (253)
|+|... .+..++..+.+.+++.-+..-....+. ...+--|+|+++.-+
T Consensus 31 G~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~~-~~~~~~DlIist~~l 79 (113)
T 1tvm_A 31 AVATSTMAAEEIKELCQSHNIPVELIQCRVNEIE-TYMDGVHLICTTARV 79 (113)
T ss_dssp CSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTT-TSTTSCSEEEESSCC
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHHh-hccCCCCEEEECCcc
Confidence 378766 466666777777787544332233343 234445888887654
No 52
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=35.83 E-value=61 Score=27.34 Aligned_cols=40 Identities=15% Similarity=0.213 Sum_probs=28.7
Q ss_pred EECCeeEEEEecCCCCCCCcCCcChhHHHHHHHHHHHHcCCCEEEEEe
Q 025413 54 TYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALKPDLIINAG 101 (253)
Q Consensus 54 ~~~g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~~~~~~vi~~G 101 (253)
++++.+|+.+ +| .-|+||...+..+...+++.+-+ |+.++
T Consensus 44 ~i~~aKVIAI-aG------KGGVGKTTtavNLA~aLA~~Gkk-VllID 83 (314)
T 3fwy_A 44 KITGAKVFAV-YG------KGGIGKSTTSSNLSAAFSILGKR-VLQIG 83 (314)
T ss_dssp ---CCEEEEE-EC------STTSSHHHHHHHHHHHHHHTTCC-EEEEE
T ss_pred CCCCceEEEE-EC------CCccCHHHHHHHHHHHHHHCCCe-EEEEe
Confidence 4567777655 47 78899999999999999988755 44444
No 53
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=30.62 E-value=1.6e+02 Score=22.40 Aligned_cols=94 Identities=13% Similarity=0.031 Sum_probs=45.1
Q ss_pred cCeEEEEEcchHhHHHHHHhcCccccCccCCCC--------CCCeEEEEEEEC----------CeeEEEEecCCCCCCCc
Q 025413 12 ISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPE--------GVPWVRYHGTYK----------DLHLNIIWPGKDTSLEV 73 (253)
Q Consensus 12 ~~~i~Ii~Al~~E~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~g~~~----------g~~v~l~~~G~~~~~~~ 73 (253)
+++|+|+.|...=-..+.+.|...........+ ..+..++.+.+. +-++++-..|.. +..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~--~~~ 81 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG--WNN 81 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC------
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC--CCC
Confidence 468999998876555666555332210000000 034455555442 335555555510 000
Q ss_pred CCcC--hhHHHHHHHHHHHHcCCCEEEEEeeecccC
Q 025413 74 DSVG--TISASLVTYASIQALKPDLIINAGTAGGFK 107 (253)
Q Consensus 74 ~giG--~~~aa~~~~~li~~~~~~~vi~~G~aG~l~ 107 (253)
+..= .+.....+-.++.+.+++.+|.+++++++.
T Consensus 82 ~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 117 (227)
T 3dhn_A 82 PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLF 117 (227)
T ss_dssp --CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSE
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhcc
Confidence 0000 122333333444456788888888887765
No 54
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=27.02 E-value=1.5e+02 Score=24.40 Aligned_cols=59 Identities=10% Similarity=0.201 Sum_probs=42.0
Q ss_pred CeeEEEEecCCCCCCCcCCcChhHHHHHHHHHH---HHcCCCEEEEEeeecccCCC--------CCCcccEEEeccc
Q 025413 57 DLHLNIIWPGKDTSLEVDSVGTISASLVTYASI---QALKPDLIINAGTAGGFKAK--------GASIGDVFLISDV 122 (253)
Q Consensus 57 g~~v~l~~~G~~~~~~~~giG~~~aa~~~~~li---~~~~~~~vi~~G~aG~l~~~--------~~~~Gdvvi~~~~ 122 (253)
+-.+.++.|| +-|++..+..+...++ +.|+||.+|.++=-+++.+| .-.+--+||++..
T Consensus 32 dI~vrv~gsG-------aKm~pe~~~~~~~~~~~~~~~~~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p 101 (283)
T 1qv9_A 32 DVEFRVVGTS-------VKMDPECVEAAVEMALDIAEDFEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAP 101 (283)
T ss_dssp SEEEEEEECT-------TCCSHHHHHHHHHHHHHHHHHHCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGG
T ss_pred CceEEEeccC-------CCCCHHHHHHHHHHhhhhhhhcCCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCc
Confidence 3456778888 4489998888766554 67999999999988877521 1234467777655
No 55
>3o3m_B Beta subunit 2-hydroxyacyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_B* 3o3o_B
Probab=26.96 E-value=1.9e+02 Score=25.02 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=23.8
Q ss_pred ecchHHHHHHHHhCCCCEEEEEEeecCCCCC
Q 025413 186 DMEGAAVAYVADLFKVPALFVKAVTDLVDGD 216 (253)
Q Consensus 186 dME~aava~~a~~~~ip~~~ir~ISD~~~~~ 216 (253)
.+|..-+-..+++.|+|++.|- .|+.+++
T Consensus 329 ~~~~~~~~~~~~~~giP~l~ie--~D~~~~~ 357 (385)
T 3o3m_B 329 EYDYPLVRKDIEDSGIPTLYVE--IDQQTQN 357 (385)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEE--ECTTCSC
T ss_pred HhhHHHHHHHHHHCCCCEEEEE--ecCCCCC
Confidence 5788888888888999999986 7887654
No 56
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=25.58 E-value=1.5e+02 Score=25.02 Aligned_cols=58 Identities=12% Similarity=0.018 Sum_probs=35.4
Q ss_pred CCeEEEEEEECCeeEEEEecCCCCCCCcCCcChhHHHH---HHHHHHHHcCCCEEEEEeeeccc
Q 025413 46 VPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASL---VTYASIQALKPDLIINAGTAGGF 106 (253)
Q Consensus 46 ~~~~~~~g~~~g~~v~l~~~G~~~~~~~~giG~~~aa~---~~~~li~~~~~~~vi~~G~aG~l 106 (253)
.+...=.|+++|++|+++..-... .+-. +|...+.- +.+.+ .+.+...|++++++|+.
T Consensus 106 ~avvtG~g~i~G~~V~v~a~d~~~-~ggs-lg~~~~~Ki~r~~e~A-~~~~~PvI~l~~sGGar 166 (304)
T 2f9y_B 106 DALVVMKGTLYGMPVVAAAFEFAF-MGGS-MGSVVGARFVRAVEQA-LEDNCPLICFSASGGAR 166 (304)
T ss_dssp SSEEEEECEETTEECBEEEECTTS-TTTC-BCTHHHHHHHHHHHHH-HHHTCCEEEEEEESSBC
T ss_pred CcEEEEEEEECCEEEEEEEEcCcc-ccCC-CCHHHHHHHHHHHHHH-HhCCCCEEEEECCCCcC
Confidence 455666789999999887653111 1111 55554432 22322 34599999999988764
No 57
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=23.20 E-value=1.2e+02 Score=25.73 Aligned_cols=31 Identities=19% Similarity=0.194 Sum_probs=23.3
Q ss_pred EEEEecCCCCCCCcCCcChhHHHHHHHHHHHHcCCCE
Q 025413 60 LNIIWPGKDTSLEVDSVGTISASLVTYASIQALKPDL 96 (253)
Q Consensus 60 v~l~~~G~~~~~~~~giG~~~aa~~~~~li~~~~~~~ 96 (253)
++++.+| ..|+||...|.++...+++.+-+.
T Consensus 27 ~i~v~sg------KGGvGKTTvA~~LA~~lA~~G~rV 57 (349)
T 3ug7_A 27 KYIMFGG------KGGVGKTTMSAATGVYLAEKGLKV 57 (349)
T ss_dssp EEEEEEC------SSSTTHHHHHHHHHHHHHHSSCCE
T ss_pred EEEEEeC------CCCccHHHHHHHHHHHHHHCCCeE
Confidence 4455555 678999999999988888775543
No 58
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=22.33 E-value=79 Score=27.08 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=23.1
Q ss_pred cCCcChhHHHHHHHHHHH--HcCCCE-EEEEeeecc
Q 025413 73 VDSVGTISASLVTYASIQ--ALKPDL-IINAGTAGG 105 (253)
Q Consensus 73 ~~giG~~~aa~~~~~li~--~~~~~~-vi~~G~aG~ 105 (253)
..|+||...|.++...++ +.+-+. +|-.-.++.
T Consensus 26 KGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~~~ 61 (354)
T 2woj_A 26 KGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPAHN 61 (354)
T ss_dssp STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSCC
T ss_pred CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCCC
Confidence 678999999999998888 665543 444444443
No 59
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=22.02 E-value=42 Score=26.35 Aligned_cols=29 Identities=14% Similarity=0.202 Sum_probs=21.9
Q ss_pred CCeEEecchHHHHHHHHhCCCCEEEEEEe
Q 025413 181 DATIKDMEGAAVAYVADLFKVPALFVKAV 209 (253)
Q Consensus 181 ~~~~vdME~aava~~a~~~~ip~~~ir~I 209 (253)
|..+=-.=++.+|.+|+++++||+++--.
T Consensus 66 G~v~nkiGT~~~Al~Ak~~~vPf~V~a~~ 94 (191)
T 1w2w_B 66 GDTANKIGTLQLAVICKQFGIKFFVVAPK 94 (191)
T ss_dssp SCEEEETTHHHHHHHHHHHTCEEEEECCG
T ss_pred CCEEecccHHHHHHHHHHcCCCEEEeccc
Confidence 34444455799999999999999997543
No 60
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=21.09 E-value=1.1e+02 Score=25.73 Aligned_cols=26 Identities=12% Similarity=0.272 Sum_probs=21.2
Q ss_pred cCCcChhHHHHHHHHHHHHcCCCEEE
Q 025413 73 VDSVGTISASLVTYASIQALKPDLII 98 (253)
Q Consensus 73 ~~giG~~~aa~~~~~li~~~~~~~vi 98 (253)
..|+||...+.++...+++.+-+.++
T Consensus 27 kGGvGKTTva~~LA~~lA~~G~rVll 52 (329)
T 2woo_A 27 KGGVGKTTTSCSLAIQMSKVRSSVLL 52 (329)
T ss_dssp SSSSSHHHHHHHHHHHHHTSSSCEEE
T ss_pred CCCCcHHHHHHHHHHHHHHCCCeEEE
Confidence 67899999999998888877766554
No 61
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=20.33 E-value=1.4e+02 Score=24.96 Aligned_cols=33 Identities=18% Similarity=0.135 Sum_probs=23.1
Q ss_pred cCCcChhHHHHHHHHHHHHcCCCE-EEEEeeecc
Q 025413 73 VDSVGTISASLVTYASIQALKPDL-IINAGTAGG 105 (253)
Q Consensus 73 ~~giG~~~aa~~~~~li~~~~~~~-vi~~G~aG~ 105 (253)
..|+||...|.++...+++.+-+. +|.+-.+++
T Consensus 22 KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~~~ 55 (324)
T 3zq6_A 22 KGGVGKTTISAATALWMARSGKKTLVISTDPAHS 55 (324)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCSSCC
T ss_pred CCCchHHHHHHHHHHHHHHCCCcEEEEeCCCCcC
Confidence 577999999999888888776543 444444443
Done!