BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025416
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P39144|LP14_BACIU 4'-phosphopantetheinyl transferase OS=Bacillus subtilis GN=lpa-14
PE=3 SV=1
Length = 224
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 68 REKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGKPEVDWENG 127
REK ++ + D + L+ +L+RT A+ ++P + F YGKP +
Sbjct: 29 REKCRRFYHKEDAHR--TLIGDMLIRTAAAKAYG---LDPAGISFGVQEYGKPYIP---- 79
Query: 128 DKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLL 187
P +HFNISH+ + C V + PIGID+E ++K + AKR+FSP E L
Sbjct: 80 ---ALPDMHFNISHSGRWIVCAVD-SKPIGIDIE----KMKPGTIDIAKRFFSPTEYSDL 131
Query: 188 TAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIRAR 231
A P+ Q LW++KE+++K G+G S P ++F++R +
Sbjct: 132 QA-KHPDQQTDYFYHLWSMKESFIKQAGKGLS-LPLDSFSVRLK 173
>sp|P39135|SFP_BACSU 4'-phosphopantetheinyl transferase sfp OS=Bacillus subtilis (strain
168) GN=sfp PE=1 SV=2
Length = 224
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 27/175 (15%)
Query: 60 QYSELLSP--REKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIY 117
++ +SP REK ++ + D + LL VLVR+ I+R Q++ ++F Y
Sbjct: 19 RFMSFISPEKREKCRRFYHKEDAHR--TLLGDVLVRSVISR---QYQLDKSDIRFSTQEY 73
Query: 118 GKPEVDWENGDKWCPPPL---HFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAF 174
GKP C P L HFNISH+ V C + PIGID+E + K L
Sbjct: 74 GKP----------CIPDLPDAHFNISHSGRWVICAFD-SQPIGIDIE----KTKPISLEI 118
Query: 175 AKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIR 229
AKR+FS E L A D + Q LW++KE+++K G+G S P ++F++R
Sbjct: 119 AKRFFSKTEYSDLLA-KDKDEQTDYFYHLWSMKESFIKQEGKGLS-LPLDSFSVR 171
>sp|P37695|HETI_NOSS1 4'-phosphopantetheinyl transferase HetI OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=hetI PE=3 SV=2
Length = 237
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 14/180 (7%)
Query: 41 ETHFWYVLPDEVKSESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQ 100
E H W + D+ ES L + LS E + ++ R ++R+ + Y
Sbjct: 19 EVHLWRIPLDQ--PESQLQDLAATLSSDELARANRFYFPEHRRRFTAGRGILRSILGGY- 75
Query: 101 TNCQVNPRSLKFKKTIYGKPEVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDV 160
V P +KF GKP + GD++ L FN+SH+ +L C V IGID+
Sbjct: 76 --LGVEPGQVKFDYESRGKPIL----GDRFAESGLLFNLSHSQNLALCAVNYTRQIGIDL 129
Query: 161 EEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQEL-IKLWTLKEAYVKAVGRGFS 219
E R + + + AKR+F P E +LL ++ P+ Q+Q++ + WT KEAY+KA G G +
Sbjct: 130 E--YLRPTSDLESLAKRFFLPREYELLRSL--PDEQKQKIFFRYWTCKEAYLKATGDGIA 185
>sp|P40683|GSP_ANEMI 4'-phosphopantetheinyl transferase gsp OS=Aneurinibacillus
migulanus GN=gsp PE=3 SV=2
Length = 237
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 96/195 (49%), Gaps = 32/195 (16%)
Query: 34 VKLPSKMETHFWYVLPDEVKSESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVR 93
VK+P++++ H + L V E + + K+ Y +LL +L+R
Sbjct: 7 VKVPNEIDRHVFNFLSSNVSKE----KQQAFVRYVNVKDAYR---------SLLGELLIR 53
Query: 94 TTIARYQTNCQVNPRSLKFKKTIYGKPEVDWENGDKWCPPPLHFNISHTSSLVACGVTVN 153
+ + + ++ F+K YGKP VD++ +HFNISH+ V C ++ N
Sbjct: 54 KYLIQV---LNIPNENILFRKNEYGKPFVDFD---------IHFNISHSDEWVVCAIS-N 100
Query: 154 VPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKA 213
P+GID+E R+ + A+++F +E L + + Q +LWT+KE+Y+KA
Sbjct: 101 HPVGIDIE----RISEIDIKIAEQFFHENEYIWLQSKAQNS-QVSSFFELWTIKESYIKA 155
Query: 214 VGRGFSAAPFNTFTI 228
+G+G P N+F I
Sbjct: 156 IGKGM-YIPINSFWI 169
>sp|Q9F4F7|FFP_BACIU 4'-phosphopantetheinyl transferase ffp OS=Bacillus subtilis GN=ffp
PE=3 SV=1
Length = 224
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 25/165 (15%)
Query: 68 REKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGKPEVDWENG 127
REK ++ + D + LL VLVR+ I+ Q+N ++F YGKP
Sbjct: 29 REKCRRFYHKEDAHR--TLLGDVLVRSVISE---QYQLNKADIRFSAQEYGKP------- 76
Query: 128 DKWCPPPL---HFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEV 184
C P L HFNISH+ V G + PIG+D+E ++K L A+R+FS +E
Sbjct: 77 ---CIPDLPNAHFNISHSGHWV-IGAFDSDPIGVDIE----KMKPISLGIAERFFSKNEY 128
Query: 185 KLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIR 229
L + E Q LW++KE+++K G+G S P ++F++R
Sbjct: 129 SDLLSKHKDE-QNDYFYHLWSMKESFIKQEGKGLS-LPLDSFSVR 171
>sp|Q55185|Y495_SYNY3 Putative 4'-phosphopantetheinyl transferase slr0495
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0495 PE=3 SV=1
Length = 246
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 84/166 (50%), Gaps = 13/166 (7%)
Query: 57 LLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTI 116
L+ Y LLS E Q Q K+ L R+ +R +AR Q +C P+ L+F
Sbjct: 16 LIPGYQALLSSEEMARGERYQRPQDKQRFLTMRLALRILLAR-QLDCL--PQQLQFTYGP 72
Query: 117 YGKPE-VDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFA 175
GKPE VD E W FN++H+ + G++ IG+D++ K L A
Sbjct: 73 QGKPELVDRERRSPW------FNVAHSGNYGLIGLSTEGEIGVDLQIMLP--KPHYLKLA 124
Query: 176 KRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAA 221
KR+F+P EV+ L ++ E + + +LWT KEA++KA G+G S
Sbjct: 125 KRFFAPQEVQQLESLEG-EKRTKLFYQLWTAKEAFLKATGKGISGG 169
>sp|P55810|PSF1_BACPU 4'-phosphopantetheinyl transferase psf-1 OS=Bacillus pumilus
GN=psf-1 PE=1 SV=1
Length = 233
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 21/149 (14%)
Query: 83 KSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGKPEVDWENGDKWCPPPLHFNISHT 142
+ LL VL+R I + + F+ GKP V P HFN+SH+
Sbjct: 45 RRTLLGEVLIRHIIHEMYA---LPMEQIIFETEGNGKPVVRQ-------IPSFHFNLSHS 94
Query: 143 SSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQE--L 200
V G + P+GID+EE +K LA A+R+FS DE + L +S P +RQE
Sbjct: 95 GDWV-VGAVDDAPVGIDIEE----IKPIDLAIAERFFSADEYQDL--LSQPA-ERQEAYF 146
Query: 201 IKLWTLKEAYVKAVGRGFSAAPFNTFTIR 229
LW++KEA++K G+G S ++FT R
Sbjct: 147 FHLWSMKEAFIKLTGKGISYG-LSSFTAR 174
>sp|Q9CQF6|ADPPT_MOUSE L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl
transferase OS=Mus musculus GN=Aasdhppt PE=2 SV=1
Length = 309
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 19/184 (10%)
Query: 53 KSESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKF 112
++E LL+ S + P EK+ + + K+AL R+++R +A + ++
Sbjct: 30 RAEWLLAMRS--IQPEEKERIGKFVFARDAKAALAGRLMIRKLVAE---KLNIPWDHIRL 84
Query: 113 KKTIYGKPEVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKIL 172
++T GKP + ++ + + P +FNISH V +GID+ + + I
Sbjct: 85 QRTSKGKPVLAKDSLNPY--PNFNFNISHQGDYAVLAAEPEVQVGIDIMKTSFPGRGSIP 142
Query: 173 AF---AKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRG---------FSA 220
F KR F+ E + + + +D Q + W LKE+++KA+G G F
Sbjct: 143 EFFHIMKRKFTKKEWETIRSFNDEWTQLDMFYRHWALKESFIKAIGVGLGFEMQRLEFDV 202
Query: 221 APFN 224
+P N
Sbjct: 203 SPLN 206
>sp|Q9NRN7|ADPPT_HUMAN L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl
transferase OS=Homo sapiens GN=AASDHPPT PE=1 SV=2
Length = 309
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Query: 53 KSESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKF 112
++E LL+ S + P EK+ + + K+A+ R+++R +A + N N ++
Sbjct: 30 RAEWLLAVRS--IQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAE-KLNIPWN--HIRL 84
Query: 113 KKTIYGKPEVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKIL 172
++T GKP + ++ + + P +FNISH + +GID+ + + I
Sbjct: 85 QRTAKGKPVLAKDSSNPY--PNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIP 142
Query: 173 AF---AKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS 219
F KR F+ E + + + D Q + W LKE+++KA+G G
Sbjct: 143 EFFHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKAIGVGLG 192
>sp|Q5NVE1|ADPPT_PONAB L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl
transferase OS=Pongo abelii GN=AASDHPPT PE=2 SV=1
Length = 309
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 53 KSESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKF 112
++E LL+ S + P EK+ + + K+A+ R+++R +A + N N ++
Sbjct: 30 RAEWLLAVRS--IQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAE-KLNIPWN--HIRL 84
Query: 113 KKTIYGKPEVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKIL 172
++T GKP + ++ + + P +FNISH + +GID+ + + I
Sbjct: 85 QRTAKGKPVLAKDSSNPY--PNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIP 142
Query: 173 AF---AKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS 219
F KR F+ E + + D Q + W LKE+++KA+G G
Sbjct: 143 EFFHIMKRKFTNKEWETIRGFKDEWTQLDMFYRNWALKESFIKAIGVGLG 192
>sp|B2RYJ4|ADPPT_RAT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl
transferase OS=Rattus norvegicus GN=Aasdhppt PE=2 SV=1
Length = 309
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 54 SESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFK 113
+E LL+ S + P EK+ + + K+AL R+++R +A + ++ +
Sbjct: 31 AEWLLAVRS--IQPEEKERIGQFVFARDAKAALAGRLMIRKLVAE---KLNIPWDHIRLQ 85
Query: 114 KTIYGKPEVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILA 173
+T GKP + + + + P +FNISH + +GID+ + + I
Sbjct: 86 RTSKGKPILAKDTLNPY--PNFNFNISHQGDYTVLAAEPELQVGIDIMKTSFPGRGSIPE 143
Query: 174 F---AKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS 219
F KR F+ E + + + +D Q + W LKE+++KA+G G
Sbjct: 144 FFHIMKRKFTNKEWETIRSFNDEWSQLDMFYRHWALKESFIKAIGVGLG 192
>sp|Q6DJH2|ADPPT_XENLA L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl
transferase OS=Xenopus laevis GN=aasdhppt PE=2 SV=1
Length = 302
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 65 LSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGKPEVDW 124
+ P EK+ + H + K+A+ R+L+R IA Q+ + ++T GKP +
Sbjct: 37 VQPEEKQRIGHFMFTRDAKAAMAGRLLMRKVIA---DKLQIPWDRILLERTGKGKPFLTG 93
Query: 125 ENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAK---RYFSP 181
+ ++ P +FN+SH + +G+D+ + + I F + R F+
Sbjct: 94 GSSSEY--PCFNFNVSHQGDYAVLAAEPDRQVGVDIMKTDLPGSSSIEEFFRLMNRQFTE 151
Query: 182 DEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS 219
E + ++++ + + W LKE+++KA+G G
Sbjct: 152 KEWNSIRSMNNDWARLDMFYRHWALKESFIKAIGVGLG 189
>sp|Q10474|LYS5_SCHPO L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl
transferase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=lys7 PE=1 SV=1
Length = 258
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 37/179 (20%)
Query: 65 LSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGKPEVDW 124
LS E++ + D K AL A +L++ + C +P ++ T G+P
Sbjct: 29 LSDSERQQIERYYFDMDAKMAL-ASILIKRHLVSTALEC--SPNEVQISVTKAGRPYCQS 85
Query: 125 ENGDKWCPPPL-HFNISHTSSLVACGVTVNVP----------IGIDVEEKQRRLKNKILA 173
+ CPP + FN+SH +V V +P IG+D+ E K LA
Sbjct: 86 AH----CPPIIFDFNVSHYGGIVIV-VGAWLPSDPSGMRPINIGVDIVE------CKPLA 134
Query: 174 FAKRY-------FSPDEVKLL-TAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAPFN 224
F + F+P E KL+ ++IS ++ LWT KEA +KA+G G S P +
Sbjct: 135 FEASWMEDFMSVFTPCEWKLIKSSISSIDV----FFLLWTCKEAILKALGIGLSGNPLD 189
>sp|P63472|ACPS_STRA5 Holo-[acyl-carrier-protein] synthase OS=Streptococcus agalactiae
serotype V (strain ATCC BAA-611 / 2603 V/R) GN=acpS PE=3
SV=1
Length = 119
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 154 VPIGIDVEEKQRRLK--NKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID++E + K + FA+R + E+ L IS+P+ Q L W KEAY
Sbjct: 3 VGHGIDLQEIEAITKAYERNQRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYS 62
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G F+ I
Sbjct: 63 KALGTGIGKVNFHDIEI 79
>sp|P63471|ACPS_STRA3 Holo-[acyl-carrier-protein] synthase OS=Streptococcus agalactiae
serotype III (strain NEM316) GN=acpS PE=3 SV=1
Length = 119
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 154 VPIGIDVEEKQRRLK--NKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID++E + K + FA+R + E+ L IS+P+ Q L W KEAY
Sbjct: 3 VGHGIDLQEIEAITKAYERNQRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYS 62
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G F+ I
Sbjct: 63 KALGTGIGKVNFHDIEI 79
>sp|Q3JZK4|ACPS_STRA1 Holo-[acyl-carrier-protein] synthase OS=Streptococcus agalactiae
serotype Ia (strain ATCC 27591 / A909 / CDC SS700)
GN=acpS PE=3 SV=1
Length = 119
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 154 VPIGIDVEEKQRRLK--NKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID++E + K + FA+R + E+ L IS+P+ Q L W KEAY
Sbjct: 3 VGHGIDLQEIEAITKAYERNQRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYS 62
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G F+ I
Sbjct: 63 KALGTGIGKVNFHDIEI 79
>sp|P50113|LYS5_YEAST L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl
transferase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=LYS5 PE=1 SV=1
Length = 272
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 16/147 (10%)
Query: 105 VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLHFNISHTSS-LVACGVTVNV-PIGIDVEE 162
+N + LKF K +GKP +D +++ P + + + LV C T +GID+
Sbjct: 83 LNFQELKFDKGSFGKPFLD---NNRFLPFSMTIGEQYVAMFLVKCVSTDEYQDVGIDIAS 139
Query: 163 KQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAP 222
+ L K FS E L SDP LW+LKE+Y K G G +
Sbjct: 140 PCNYGGREELELFKEVFSEREFNGLLKASDP---CTIFTYLWSLKESYTKFTGTGLNT-- 194
Query: 223 FNTFTIRARVVKMGGFHHFDTQHSEVC 249
++ G F + + +C
Sbjct: 195 ------DLSLIDFGAISFFPAEGASMC 215
>sp|P37623|ACPT_ECOLI 4'-phosphopantetheinyl transferase AcpT OS=Escherichia coli (strain
K12) GN=acpT PE=3 SV=1
Length = 195
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 134 PLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDP 193
PL FN+SH+ +A ++ +G D+E + R + LA A FS E + A+ P
Sbjct: 66 PLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWRWLANA--VFSLGEHAEMDAV-HP 122
Query: 194 EIQRQELIKLWTLKEAYVKAVGRGFSA 220
+ Q + ++WT KEA VK RG SA
Sbjct: 123 DQQLEMFWRIWTRKEAIVKQ--RGGSA 147
>sp|Q8X5U4|ACPT_ECO57 4'-phosphopantetheinyl transferase AcpT OS=Escherichia coli O157:H7
GN=acpT PE=3 SV=1
Length = 195
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 134 PLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDP 193
PL FN+SH+ +A ++ +G D+E + R + LA A FS E + A+ P
Sbjct: 66 PLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWRWLANA--VFSLGEHAEMDAV-HP 122
Query: 194 EIQRQELIKLWTLKEAYVKAVGRGFSA 220
+ Q + ++WT KEA VK RG SA
Sbjct: 123 DQQLEMFWRIWTRKEAIVKQ--RGGSA 147
>sp|Q8ZLE2|ACPT_SALTY 4'-phosphopantetheinyl transferase AcpT OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=acpT PE=3 SV=1
Length = 192
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 134 PLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDP 193
PL FN+SH+ +A ++ +G D+E R ++ + A FS E + A P
Sbjct: 66 PLWFNLSHSGDTIALLLSDEGEVGCDIEVI--RPRDNWRSLANAVFSLGEHAEMEA-ERP 122
Query: 194 EIQRQELIKLWTLKEAYVKAVGRGFSA 220
E Q ++WT KEA VK RG SA
Sbjct: 123 EQQLAAFWRIWTRKEAIVKQ--RGGSA 147
>sp|Q8Z259|ACPT_SALTI 4'-phosphopantetheinyl transferase AcpT OS=Salmonella typhi GN=acpT
PE=3 SV=1
Length = 192
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 134 PLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDP 193
PL FN+SH+ +A ++ +G D+E R ++ + A FS E + A P
Sbjct: 66 PLWFNLSHSGDTIALLLSDEGEVGCDIEVI--RPRDNWRSLANAVFSLGEHAEMEA-ERP 122
Query: 194 EIQRQELIKLWTLKEAYVKAVGRGFSA 220
E Q ++WT KEA VK RG SA
Sbjct: 123 ERQLAAFWRIWTRKEAIVKQ--RGGSA 147
>sp|Q5FHL6|ACPS_EHRRG Holo-[acyl-carrier-protein] synthase OS=Ehrlichia ruminantium
(strain Gardel) GN=acpS PE=3 SV=1
Length = 123
Score = 37.7 bits (86), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 20/100 (20%)
Query: 154 VPIGIDVEEKQR------RLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLK 207
V IGIDV R + NK F K+ FS +E+K + E + + K + K
Sbjct: 3 VGIGIDVVYIPRILNLWKKFGNK---FLKKVFSQEEIKDSNKYTSCEGKARHFAKRFAAK 59
Query: 208 EAYVKAVGRGFSAAPFNTFTIRARVVKMGGFHHFDTQHSE 247
EAYVKA+G GF + +KM ++T H +
Sbjct: 60 EAYVKALGTGF-----------GKSIKMSDITTYNTLHGK 88
>sp|Q8XAN7|ACPS2_ECO57 Probable holo-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
O157:H7 GN=acpS2 PE=3 SV=1
Length = 122
Score = 37.4 bits (85), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 156 IGIDVEEKQRRLK---NKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVK 212
IG D+ E R K N +AF +R ++ E +LL ++P+ +R W KEA VK
Sbjct: 3 IGTDIVEIARITKAIINGEMAFYERVYTSHE-RLLINPAEPDYERAS--GFWAAKEALVK 59
Query: 213 AVGRGF 218
A+G GF
Sbjct: 60 AIGCGF 65
>sp|Q21CE8|MUTS_RHOPB DNA mismatch repair protein MutS OS=Rhodopseudomonas palustris
(strain BisB18) GN=mutS PE=3 SV=2
Length = 905
Score = 37.0 bits (84), Expect = 0.14, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 74 YHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGKPEVDWENGDKWCPP 133
YH D+ +K +R++V ARY +C V ++ + EV ++GDK P
Sbjct: 456 YHDALDETRKLRDDSRLIVAAMQARYADDCGVKGLKIRHNNVLGYFVEVTAQHGDKLMAP 515
Query: 134 PLHFNISHTSSL 145
PL+ H +L
Sbjct: 516 PLNLTFIHRQTL 527
>sp|Q5HBI7|ACPS_EHRRW Holo-[acyl-carrier-protein] synthase OS=Ehrlichia ruminantium
(strain Welgevonden) GN=acpS PE=3 SV=1
Length = 123
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 154 VPIGIDVEEKQR------RLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLK 207
V IGID+ R + NK F K+ FS +E+K + E + + K + K
Sbjct: 3 VGIGIDIVYIPRILNLWKKFGNK---FLKKVFSQEEIKDSNKYTSCEGKARHFAKRFAAK 59
Query: 208 EAYVKAVGRGFS 219
EAYVKA+G GF
Sbjct: 60 EAYVKALGTGFG 71
>sp|Q2GG91|ACPS_EHRCR Holo-[acyl-carrier-protein] synthase OS=Ehrlichia chaffeensis
(strain Arkansas) GN=acpS PE=3 SV=1
Length = 123
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 174 FAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS 219
F KR FS E++ ++ + Q + K + KEAYVKAVG GF
Sbjct: 26 FLKRVFSEKEIEDSKKYTNFDAQVRHFAKRFAAKEAYVKAVGTGFG 71
>sp|Q4FLS7|ACPS_PELUB Holo-[acyl-carrier-protein] synthase OS=Pelagibacter ubique (strain
HTCC1062) GN=acpS PE=3 SV=1
Length = 128
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 154 VPIGIDVEEKQR---RLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAY 210
+ IG+D+ E R LKN + F KR FS E+ L I++ ++ K + KEA+
Sbjct: 4 LGIGVDIVENIRIHKSLKN--VNFIKRVFSSSEILLAKKITN---KKSFYSKRFAAKEAF 58
Query: 211 VKAVGRGF 218
KA+G GF
Sbjct: 59 SKAIGTGF 66
>sp|C1CSW0|ACPS_STRZT Holo-[acyl-carrier-protein] synthase OS=Streptococcus pneumoniae
(strain Taiwan19F-14) GN=acpS PE=3 SV=1
Length = 120
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 154 VPIGIDVEE--KQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID+EE + FAKR + E++ T++ Q + L W+ KEA+
Sbjct: 3 VGHGIDIEELASIESAVTRHEGFAKRVLTAQEMERFTSLKGRR-QIEYLAGRWSAKEAFS 61
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G S F +
Sbjct: 62 KAMGTGISKLGFQDLEV 78
>sp|C1CM35|ACPS_STRZP Holo-[acyl-carrier-protein] synthase OS=Streptococcus pneumoniae
(strain P1031) GN=acpS PE=3 SV=1
Length = 120
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 154 VPIGIDVEE--KQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID+EE + FAKR + E++ T++ Q + L W+ KEA+
Sbjct: 3 VGHGIDIEELASIESAVTRHEGFAKRVLTAQEMERFTSLKGRR-QIEYLAGRWSAKEAFS 61
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G S F +
Sbjct: 62 KAMGTGISKLGFQDLEV 78
>sp|C1CFR8|ACPS_STRZJ Holo-[acyl-carrier-protein] synthase OS=Streptococcus pneumoniae
(strain JJA) GN=acpS PE=3 SV=1
Length = 120
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 154 VPIGIDVEE--KQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID+EE + FAKR + E++ T++ Q + L W+ KEA+
Sbjct: 3 VGHGIDIEELASIESAVTRHEGFAKRVLTAQEMERFTSLKGRR-QIEYLAGRWSAKEAFS 61
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G S F +
Sbjct: 62 KAMGTGISKLGFQDLEV 78
>sp|P0A2W7|ACPS_STRR6 Holo-[acyl-carrier-protein] synthase OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=acpS PE=1 SV=1
Length = 120
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 154 VPIGIDVEE--KQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID+EE + FAKR + E++ T++ Q + L W+ KEA+
Sbjct: 3 VGHGIDIEELASIESAVTRHEGFAKRVLTAQEMERFTSLKGRR-QIEYLAGRWSAKEAFS 61
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G S F +
Sbjct: 62 KAMGTGISKLGFQDLEV 78
>sp|P0A2W6|ACPS_STRPN Holo-[acyl-carrier-protein] synthase OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=acpS PE=1
SV=1
Length = 120
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 154 VPIGIDVEE--KQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID+EE + FAKR + E++ T++ Q + L W+ KEA+
Sbjct: 3 VGHGIDIEELASIESAVTRHEGFAKRVLTAQEMERFTSLKGRR-QIEYLAGRWSAKEAFS 61
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G S F +
Sbjct: 62 KAMGTGISKLGFQDLEV 78
>sp|B8ZMG2|ACPS_STRPJ Holo-[acyl-carrier-protein] synthase OS=Streptococcus pneumoniae
(strain ATCC 700669 / Spain 23F-1) GN=acpS PE=3 SV=1
Length = 120
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 154 VPIGIDVEE--KQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID+EE + FAKR + E++ T++ Q + L W+ KEA+
Sbjct: 3 VGHGIDIEELASIESAVTRHEGFAKRVLTAQEMERFTSLKGRR-QIEYLAGRWSAKEAFS 61
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G S F +
Sbjct: 62 KAMGTGISKLGFQDLEV 78
>sp|B1I756|ACPS_STRPI Holo-[acyl-carrier-protein] synthase OS=Streptococcus pneumoniae
(strain Hungary19A-6) GN=acpS PE=3 SV=1
Length = 120
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 154 VPIGIDVEE--KQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID+EE + FAKR + E++ T++ Q + L W+ KEA+
Sbjct: 3 VGHGIDIEELASIESAVTRHEGFAKRVLTAQEMERFTSLKGRR-QIEYLAGRWSAKEAFS 61
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G S F +
Sbjct: 62 KAMGTGISKLGFQDLEV 78
>sp|C1C8T7|ACPS_STRP7 Holo-[acyl-carrier-protein] synthase OS=Streptococcus pneumoniae
(strain 70585) GN=acpS PE=3 SV=1
Length = 120
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 154 VPIGIDVEE--KQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID+EE + FAKR + E++ T++ Q + L W+ KEA+
Sbjct: 3 VGHGIDIEELASIESAVTRHEGFAKRVLTAQEMERFTSLKGRR-QIEYLAGRWSAKEAFS 61
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G S F +
Sbjct: 62 KAMGTGISKLGFQDLEV 78
>sp|B5E746|ACPS_STRP4 Holo-[acyl-carrier-protein] synthase OS=Streptococcus pneumoniae
serotype 19F (strain G54) GN=acpS PE=3 SV=1
Length = 120
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 154 VPIGIDVEE--KQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID+EE + FAKR + E++ T++ Q + L W+ KEA+
Sbjct: 3 VGHGIDIEELASIESAVTRHEGFAKRVLTAQEMERFTSLKGRR-QIEYLAGRWSAKEAFS 61
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G S F +
Sbjct: 62 KAMGTGISKLGFQDLEV 78
>sp|Q04J73|ACPS_STRP2 Holo-[acyl-carrier-protein] synthase OS=Streptococcus pneumoniae
serotype 2 (strain D39 / NCTC 7466) GN=acpS PE=3 SV=1
Length = 120
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 154 VPIGIDVEE--KQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211
V GID+EE + FAKR + E++ T++ Q + L W+ KEA+
Sbjct: 3 VGHGIDIEELASIESAVTRHEGFAKRVLTAQEMERFTSLKGRR-QIEYLAGRWSAKEAFS 61
Query: 212 KAVGRGFSAAPFNTFTI 228
KA+G G S F +
Sbjct: 62 KAMGTGISKLGFQDLEV 78
>sp|Q5PAZ6|ACPS_ANAMM Holo-[acyl-carrier-protein] synthase OS=Anaplasma marginale (strain
St. Maries) GN=acpS PE=3 SV=1
Length = 120
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 154 VPIGIDVEEKQR------RLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLK 207
V IG+D+ +R R N+ F R FS E++ + + K + K
Sbjct: 3 VGIGVDLVSVRRMQQLLERFGNR---FTARAFSEVEIRDSLQYKNAHAVARHFAKRFAAK 59
Query: 208 EAYVKAVGRGFS 219
EAYVKAVG GF
Sbjct: 60 EAYVKAVGLGFG 71
>sp|B9KIC8|ACPS_ANAMF Holo-[acyl-carrier-protein] synthase OS=Anaplasma marginale (strain
Florida) GN=acpS PE=3 SV=1
Length = 120
Score = 34.3 bits (77), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 154 VPIGIDVEEKQR------RLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLK 207
V IG+D+ +R R N+ F R FS E++ + + K + K
Sbjct: 3 VGIGVDLVSVRRMQQLLERFGNR---FTTRAFSEVEIRDSLQYKNAHAVARHFAKRFAAK 59
Query: 208 EAYVKAVGRGFS 219
EAYVKAVG GF
Sbjct: 60 EAYVKAVGLGFG 71
>sp|B8IZX1|ACPS_DESDA Holo-[acyl-carrier-protein] synthase OS=Desulfovibrio desulfuricans
(strain ATCC 27774 / DSM 6949) GN=acpS PE=3 SV=1
Length = 124
Score = 34.3 bits (77), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 154 VPIGIDVEEKQRRLKNKILAFAKRY----FSPDEVKLLTAISDPEIQRQELIKLWTLKEA 209
V +G+D+ E R ++ + F +R+ SP+E+ + P + + + +KEA
Sbjct: 3 VGLGVDIVELAR-IEKSLTRFGRRFAEKVLSPEEMAAM-----PTLTVNYIAGRFAVKEA 56
Query: 210 YVKAVGRGFS 219
VKA+G GFS
Sbjct: 57 AVKALGTGFS 66
>sp|Q72AT2|ACPS_DESVH Holo-[acyl-carrier-protein] synthase OS=Desulfovibrio vulgaris
(strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=acpS
PE=3 SV=1
Length = 124
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 154 VPIGIDVEEKQR------RLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLK 207
V IGID+ E R R ++ FA+R P EV + A ++P L + +K
Sbjct: 3 VGIGIDITEIDRIAKGWGRFGDR---FARRILHPHEVVRMPA-ANPV---AFLAGRFAVK 55
Query: 208 EAYVKAVGRGFSAA 221
EA VKA+G GFS
Sbjct: 56 EAAVKALGTGFSGG 69
>sp|Q03IX7|ACPS_STRTD Holo-[acyl-carrier-protein] synthase OS=Streptococcus thermophilus
(strain ATCC BAA-491 / LMD-9) GN=acpS PE=3 SV=1
Length = 119
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 157 GIDVEEKQ--RRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAV 214
GID++E ++ ++ FAK+ +P E + ++S E Q L W KEA+ KA
Sbjct: 6 GIDLQEISAVKKAYDRNPRFAKKVLTPKEWERFESLSG-ERQMSFLAGRWAGKEAFSKAW 64
Query: 215 GRGFSAAPFNTFTI 228
G G A F I
Sbjct: 65 GTGIGAVGFKDIEI 78
>sp|Q5M2S6|ACPS_STRT2 Holo-[acyl-carrier-protein] synthase OS=Streptococcus thermophilus
(strain ATCC BAA-250 / LMG 18311) GN=acpS PE=3 SV=1
Length = 119
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 157 GIDVEEKQ--RRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAV 214
GID++E ++ ++ FAK+ +P E + ++S E Q L W KEA+ KA
Sbjct: 6 GIDLQEISAVKKAYDRNPRFAKKVLTPKEWERFESLSG-ERQMSFLAGRWAGKEAFSKAW 64
Query: 215 GRGFSAAPFNTFTI 228
G G A F I
Sbjct: 65 GTGIGAVGFKDIEI 78
>sp|Q5LY70|ACPS_STRT1 Holo-[acyl-carrier-protein] synthase OS=Streptococcus thermophilus
(strain CNRZ 1066) GN=acpS PE=3 SV=1
Length = 119
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 157 GIDVEEKQ--RRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAV 214
GID++E ++ ++ FAK+ +P E + ++S E Q L W KEA+ KA
Sbjct: 6 GIDLQEISAVKKAYDRNPRFAKKVLTPKEWERFESLSG-ERQMSFLAGRWAGKEAFSKAW 64
Query: 215 GRGFSAAPFNTFTI 228
G G A F I
Sbjct: 65 GTGIGAVGFKDIEI 78
>sp|A1VCV8|ACPS_DESVV Holo-[acyl-carrier-protein] synthase OS=Desulfovibrio vulgaris
subsp. vulgaris (strain DP4) GN=acpS PE=3 SV=1
Length = 124
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 154 VPIGIDVEEKQR------RLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLK 207
V IGID+ E R R ++ FA+R P EV + A ++P L + +K
Sbjct: 3 VGIGIDITEIDRIAKGWGRFGDR---FARRILHPHEVVRMPA-ANPV---AFLAGRFAVK 55
Query: 208 EAYVKAVGRGFS 219
EA VKA+G GFS
Sbjct: 56 EAAVKALGTGFS 67
>sp|P0CF52|KDM7B_DANRE Lysine-specific demethylase 7B OS=Danio rerio GN=jhdm1db PE=2 SV=1
Length = 577
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 133 PPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAIS 191
PP F+I V ++V IDV +Q K K+ AF K Y+SP K+L IS
Sbjct: 141 PPPDFSIKDVERYVGGNKVIDV---IDVA-RQADSKMKLKAFVKYYYSPQRPKVLNVIS 195
>sp|Q31HN9|ACPS_THICR Holo-[acyl-carrier-protein] synthase OS=Thiomicrospira crunogena
(strain XCL-2) GN=acpS PE=3 SV=1
Length = 127
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 154 VPIGIDVEEKQR---RLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAY 210
V IG D+ E R + + FAKR + E++ PE + L K W KEA
Sbjct: 3 VGIGTDLVEIARIAALMTKRNEVFAKRILAQQELERFKQHGQPE---KFLAKRWAAKEAI 59
Query: 211 VKAVGRGFS 219
KA+G GF+
Sbjct: 60 SKALGTGFT 68
>sp|Q03T07|ACPS_LACBA Holo-[acyl-carrier-protein] synthase OS=Lactobacillus brevis
(strain ATCC 367 / JCM 1170) GN=acpS PE=3 SV=1
Length = 122
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 16/109 (14%)
Query: 157 GIDVEEKQR--RLKNKILAFAKRYFSPDEVKLLTAISDPEIQR--QELIKLWTLKEAYVK 212
GID+ + +R R+ + F + +P+E +S QR + + W+ KE+Y K
Sbjct: 6 GIDITDLKRVQRVVERQPRFLTKVLTPNERVDYQKLSG---QRALEFIAGRWSAKESYSK 62
Query: 213 AVGRGFSAA-PFNTFTIR--------ARVVKMGGFHHFDTQHSEVCCQT 252
A+G G A F IR R GG H H+E T
Sbjct: 63 AMGTGIGATVTFQDIEIRDNDAGRPVVRRQPFGGIAHVSISHTETVVMT 111
>sp|O55752|148R_IIV6 Putative MSV199 domain-containing protein 148R OS=Invertebrate
iridescent virus 6 GN=IIV6-148R PE=4 SV=1
Length = 414
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 4/27 (14%)
Query: 103 CQVNPRSL--KFKKTIYGKPEVDWENG 127
CQ NPR+L +FK+ I GKPE WEN
Sbjct: 358 CQPNPRNLFLRFKERIDGKPE--WENN 382
>sp|B3CL63|ACPS_WOLPP Holo-[acyl-carrier-protein] synthase OS=Wolbachia pipientis subsp.
Culex pipiens (strain wPip) GN=acpS PE=3 SV=1
Length = 124
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 174 FAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS 219
F + ++ E+++ + E++ + K + KEA+VKA+G GFS
Sbjct: 26 FLNKVYTKKEIEISKKYNSQEVRAKYFAKRFAAKEAFVKALGTGFS 71
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,047,752
Number of Sequences: 539616
Number of extensions: 3638779
Number of successful extensions: 8536
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 8492
Number of HSP's gapped (non-prelim): 78
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)