Query 025416
Match_columns 253
No_of_seqs 171 out of 1567
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 09:50:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025416.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025416hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qr0_A 4'-phosphopantetheinyl 100.0 7.5E-37 2.6E-41 264.3 15.7 176 42-234 1-176 (228)
2 2c43_A Aminoadipate-semialdehy 100.0 1.6E-34 5.6E-39 261.5 16.7 189 38-232 22-214 (323)
3 3f09_A Holo-[acyl-carrier-prot 99.6 4.7E-16 1.6E-20 124.8 4.4 100 134-239 13-115 (143)
4 1fth_A ACPS, acyl carrier prot 99.5 1.3E-14 4.6E-19 112.9 5.9 84 154-238 5-90 (122)
5 2was_A 3-oxoacyl-[acyl-carrier 99.4 9.6E-14 3.3E-18 108.2 5.4 83 154-240 2-86 (122)
6 3h88_A Holo-[acyl-carrier-prot 99.4 3E-13 1E-17 106.5 8.0 84 155-241 7-94 (129)
7 3hyk_A Holo-[acyl-carrier-prot 99.4 2.1E-13 7.3E-18 106.4 6.1 85 155-240 7-94 (122)
8 1f7l_A Holo-(acyl carrier prot 99.4 2.4E-13 8.1E-18 105.5 6.0 83 155-240 4-91 (121)
9 2bdd_A ACP-synthase; structura 99.3 2.9E-12 9.8E-17 106.5 7.4 87 154-241 25-130 (182)
10 3gwm_A Holo-[acyl-carrier-prot 99.3 3.5E-12 1.2E-16 100.4 6.4 84 155-241 4-97 (129)
11 2qg8_A Acyl carrier protein sy 99.3 3.4E-12 1.2E-16 104.4 6.4 88 154-241 6-111 (163)
12 2wds_A Holo-[acyl-carrier-prot 99.2 2.5E-12 8.5E-17 103.0 2.5 82 155-241 25-109 (143)
13 1f7l_A Holo-(acyl carrier prot 99.2 3.2E-11 1.1E-15 93.3 7.9 86 61-151 26-115 (121)
14 3f09_A Holo-[acyl-carrier-prot 99.2 3.5E-11 1.2E-15 96.3 8.1 83 61-150 50-136 (143)
15 3ota_A Holo-[acyl-carrier-prot 99.1 1.2E-10 4E-15 91.6 8.1 84 155-241 7-94 (129)
16 3nfd_A Phosphopantetheine prot 99.1 2.2E-11 7.7E-16 98.5 3.0 86 155-242 9-117 (153)
17 3hyk_A Holo-[acyl-carrier-prot 99.0 9.3E-10 3.2E-14 85.6 9.1 83 61-150 29-115 (122)
18 1fth_A ACPS, acyl carrier prot 98.9 3.7E-09 1.3E-13 81.9 9.1 83 62-150 29-114 (122)
19 3gwm_A Holo-[acyl-carrier-prot 98.9 3.6E-09 1.2E-13 83.1 7.6 85 63-150 28-124 (129)
20 3ota_A Holo-[acyl-carrier-prot 98.9 2.2E-09 7.6E-14 84.3 6.0 85 61-149 30-123 (129)
21 3h88_A Holo-[acyl-carrier-prot 98.8 8.9E-09 3.1E-13 80.8 8.1 86 61-150 30-124 (129)
22 2was_A 3-oxoacyl-[acyl-carrier 98.8 2.3E-08 7.7E-13 77.5 8.0 86 61-150 22-117 (122)
23 2qg8_A Acyl carrier protein sy 98.7 1.9E-08 6.3E-13 82.1 7.4 89 61-150 29-141 (163)
24 2bdd_A ACP-synthase; structura 98.7 2E-08 6.9E-13 83.2 6.6 89 61-150 48-160 (182)
25 3nfd_A Phosphopantetheine prot 98.7 2.7E-08 9.2E-13 80.3 5.9 89 62-150 32-147 (153)
26 2wds_A Holo-[acyl-carrier-prot 98.6 8.6E-09 2.9E-13 82.3 2.4 86 61-149 47-138 (143)
27 2uv9_A Fatty acid synthase alp 98.3 9.7E-08 3.3E-12 101.7 0.0 85 153-241 1758-1844(1878)
28 2uv8_A Fatty acid synthase sub 98.0 9.1E-07 3.1E-11 94.5 0.0 85 153-241 1766-1852(1887)
29 1qr0_A 4'-phosphopantetheinyl 97.8 0.00019 6.5E-09 61.0 11.0 87 59-151 117-206 (228)
30 2uv8_A Fatty acid synthase sub 97.5 1.4E-05 4.8E-10 85.5 0.0 84 61-148 1787-1880(1887)
31 2uv9_A Fatty acid synthase alp 97.4 2E-05 7E-10 84.2 0.0 84 61-148 1779-1872(1878)
32 2c43_A Aminoadipate-semialdehy 96.7 0.0076 2.6E-07 53.8 9.3 89 60-151 157-256 (323)
33 2z0r_A Putative uncharacterize 69.6 1.3 4.5E-05 32.5 0.7 27 203-234 58-85 (103)
34 1b3q_A Protein (chemotaxis pro 35.8 6.9 0.00024 34.9 -0.3 32 133-165 138-169 (379)
35 2wpv_B Ubiquitin-like protein 32.3 12 0.00042 24.2 0.5 14 3-16 11-24 (59)
36 2dbh_A Tumor necrosis factor r 31.9 78 0.0027 21.9 4.6 36 171-207 41-76 (102)
No 1
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1
Probab=100.00 E-value=7.5e-37 Score=264.25 Aligned_cols=176 Identities=30% Similarity=0.519 Sum_probs=156.2
Q ss_pred EEEEEEeCCCCCChhhHHHHhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcCCCCCCcceEeeCCCCCce
Q 025416 42 THFWYVLPDEVKSESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGKPE 121 (253)
Q Consensus 42 v~~w~~~~~~~~~~~~~~~~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~~~~p~~i~~~~~~~GkP~ 121 (253)
+++|.++.+...++..++.+.++|+++|++++.+|+.+++|.+|+++|.++|++|+++ +|++|.+++|.++++|||+
T Consensus 1 ~~v~~~~~~~~~~~~~~~~~~~~Ls~~E~~~~~~~~~~~~r~~~la~R~~~r~al~~~---lg~~~~~i~i~~~~~GkP~ 77 (228)
T 1qr0_A 1 MKIYGIYMDRPLSQEENERFMTFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQ---YQLDKSDIRFSTQEYGKPC 77 (228)
T ss_dssp CEEEEEECSSCCCHHHHHHHHTTSCHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHH---TTCCGGGCCCEECTTSCEE
T ss_pred CEEEEEECCCcCCHHHHHHHHhhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH---hCcCHHHcEEeeCcCCCce
Confidence 4799999876545556778889999999999999999999999999999999999998 6899999999999999999
Q ss_pred EecCCCCCCCCCCeEEEeccccCcceeEEecccCCccchHHHHHhhhhhHHHHHHhcCCHHHHHHHhcCCChhHHHHHHH
Q 025416 122 VDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELI 201 (253)
Q Consensus 122 l~~~~~~~~~~~~~~fSISHs~~~v~~avs~~~~VGIDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~ 201 (253)
+.. .++++||||||+++++|+++ ..+||||||.+.+. + ..+++++||++|++.+.+.+. +.+.+.|+
T Consensus 78 l~~-------~~~~~~SiSHs~~~a~~a~~-~~~vGiDie~i~~~---~-~~~~~~~~t~~E~~~l~~~~~-~~~~~~~~ 144 (228)
T 1qr0_A 78 IPD-------LPDAHFNISHSGRWVIGAFD-SQPIGIDIEKTKPI---S-LEIAKRFFSKTEYSDLLAKDK-DEQTDYFY 144 (228)
T ss_dssp CTT-------CTTCEEEEEEETTEEEEEEE-SSCCEEEEEECCCC---C-HHHHSSSSCHHHHHHHHHSCH-HHHHHHHH
T ss_pred EeC-------CCCceEEecccCCeEEEEEC-CCCEEEEeEECCCC---c-HHHHHHhCCHHHHHHHHhCCh-hhHHHHHH
Confidence 984 25799999999999999998 69999999999763 2 378999999999999998763 45678999
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCeEEEEecCCC
Q 025416 202 KLWTLKEAYVKAVGRGFSAAPFNTFTIRARVVK 234 (253)
Q Consensus 202 ~~Wt~KEA~~Ka~G~GL~~~~l~~~~v~~~~~~ 234 (253)
.+||+|||++|++|+||. .+++.++|..++..
T Consensus 145 ~~wt~KEA~~Ka~G~gl~-~~~~~~~i~~~~~g 176 (228)
T 1qr0_A 145 HLWSMKESFIKQEGKGLS-LPLDSFSVRLHQDG 176 (228)
T ss_dssp HHHHHHHHHHHHHCSTTS-CCSSCCEEEECGGG
T ss_pred HHHHHHHHHHHHhCCCCC-CCCceEEEeeCCCC
Confidence 999999999999999998 79999999877543
No 2
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A*
Probab=100.00 E-value=1.6e-34 Score=261.48 Aligned_cols=189 Identities=20% Similarity=0.308 Sum_probs=159.9
Q ss_pred CCCeEEEEEEeCCCCCC-hhhHHHHhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcCCCCCCcceEeeCC
Q 025416 38 SKMETHFWYVLPDEVKS-ESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTI 116 (253)
Q Consensus 38 ~~~~v~~w~~~~~~~~~-~~~~~~~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~~~~p~~i~~~~~~ 116 (253)
.......|.++...|.. ...+..+..+|+++|++++.+|+.+++|.+|+++|+++|.+|+++ +|++|.+++|.+++
T Consensus 22 ~~~~~~rw~~~~~~W~~~~~~~~~~~~~Ls~~E~~r~~r~~~~~~r~~~LagR~l~r~al~~~---lg~~~~~i~i~~~~ 98 (323)
T 2c43_A 22 GHMEGVRWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEK---LNIPWNHIRLQRTA 98 (323)
T ss_dssp CCCCCEEEEECGGGCCCCHHHHHHHHHTSCHHHHHHHHTCSBHHHHHHHHHHHHHHHHHHHHH---SCCCGGGCCEEECT
T ss_pred ccCCceEEEEEcCCCCCCHHHHHHHHccCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH---HCcCHHHeeEeeCC
Confidence 34457789999888854 334455678999999999999999999999999999999999998 78999999999999
Q ss_pred CCCceEecCCCCCCCCCCeEEEeccccCcceeEEecccCCccchHHHHHh---hhhhHHHHHHhcCCHHHHHHHhcCCCh
Q 025416 117 YGKPEVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRR---LKNKILAFAKRYFSPDEVKLLTAISDP 193 (253)
Q Consensus 117 ~GkP~l~~~~~~~~~~~~~~fSISHs~~~v~~avs~~~~VGIDIE~~~~~---~~~~~~~l~~~~fs~~E~~~l~~~~~~ 193 (253)
+|||++..+.. ...++++||||||++++++|++...+||||||.+.+. ...++..+++++||+.|++.+...+++
T Consensus 99 ~GKP~l~~~~~--~~~~~~~fSISHs~~~av~avs~~~~VGIDIE~i~~~~~~~~~~~~~~~~r~ft~~E~~~l~~~~~~ 176 (323)
T 2c43_A 99 KGKPVLAKDSS--NPYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDE 176 (323)
T ss_dssp TSCEEECCC----CCSSSCEEEEEEETTEEEEEEESSSEEEEEEEECCCCSSSCHHHHHHHTGGGSCHHHHHHHTTSSSH
T ss_pred CCCceeeCCcc--CCCCCceEEEEEeCCceeeeecCCCCceeeeEEeechhhhhhhhHHHHHHHhCCHHHHHHHHcCCCh
Confidence 99999986321 0135799999999999999999668999999998753 113456889999999999999988754
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCCCCCeEEEEecC
Q 025416 194 EIQRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIRARV 232 (253)
Q Consensus 194 ~~~~~~f~~~Wt~KEA~~Ka~G~GL~~~~l~~~~v~~~~ 232 (253)
..+...|+++||+||||+|++|.||. .+++.++|..+|
T Consensus 177 ~~~~~~f~~~WtaKEA~~KA~G~Gl~-~~l~~iev~~~p 214 (323)
T 2c43_A 177 WTQLDMFYRNWALKESFIKAIGVGLG-FELQRLEFDLSP 214 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCSC-CCGGGEEEECCS
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCeEEEEeCc
Confidence 45678999999999999999999997 799999999874
No 3
>3f09_A Holo-[acyl-carrier-protein] synthase; structural genomics, I deseases, fatty acid biosynthesis, lipid synthesis; 1.82A {Staphylococcus aureus subsp} PDB: 4dxe_A
Probab=99.59 E-value=4.7e-16 Score=124.79 Aligned_cols=100 Identities=21% Similarity=0.263 Sum_probs=73.5
Q ss_pred CeEEEeccccCcceeEEecccCCccchHHHHHhhh--hhHHHHHHhcCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHH
Q 025416 134 PLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLK--NKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYV 211 (253)
Q Consensus 134 ~~~fSISHs~~~v~~avs~~~~VGIDIE~~~~~~~--~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~ 211 (253)
--.||+||++++.+++ |||||+.+.+-.. .....+++++||++|++.+...+.+..+.+.|+..|++|||+.
T Consensus 13 ~~~~n~s~~~~~mI~g------IGiDIv~i~Ri~~~~~r~~~f~~rift~~E~~~~~~~~~~~~~~~~lA~RwAaKEA~~ 86 (143)
T 3f09_A 13 LGTENLYFQSNAMIHG------IGVDLIEIDRIQALYSKQPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFS 86 (143)
T ss_dssp TTCCCHHHHCCCSEEE------EEEEEEEHHHHHHHHHTCGGGHHHHSCHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeccccCCCEEEE------EEEEEEEehHHHHHHhhhHHHHHHhCCHHHHHHhhccCchhhHHHHHHHHHHHHHHHH
Confidence 3469999999997654 7999999986210 1113688999999999999998754556778999999999999
Q ss_pred hccCCCCCC-CCCCeEEEEecCCCcceEE
Q 025416 212 KAVGRGFSA-APFNTFTIRARVVKMGGFH 239 (253)
Q Consensus 212 Ka~G~GL~~-~~l~~~~v~~~~~~~g~~~ 239 (253)
||+|+|+.. .+++.++|..++..++.+.
T Consensus 87 KAlG~G~~~~~~~~dIeI~~d~~GkP~l~ 115 (143)
T 3f09_A 87 KALGTGLGKHVAFNDIDCYNDELGKPKID 115 (143)
T ss_dssp HHHC------CCGGGCCEEEC--CCEEEC
T ss_pred HHhccCcccCcCcceEEEEECCCCCeEEE
Confidence 999999862 5789999988776555443
No 4
>1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A*
Probab=99.51 E-value=1.3e-14 Score=112.91 Aligned_cols=84 Identities=30% Similarity=0.377 Sum_probs=66.8
Q ss_pred cCCccchHHHHHhhh--hhHHHHHHhcCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCeEEEEec
Q 025416 154 VPIGIDVEEKQRRLK--NKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIRAR 231 (253)
Q Consensus 154 ~~VGIDIE~~~~~~~--~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~~~~l~~~~v~~~ 231 (253)
..||||||.+.+... .....+++++||++|++.+.+.+ +..+.+.|+..||+|||++|++|+|+...+++.++|..+
T Consensus 5 ~~iGvDie~i~r~~~~~~~~~~~~~r~~t~~E~~~~~~~~-~~~~~~~~a~rwaaKEA~~KalG~gl~~~~~~~i~i~~~ 83 (122)
T 1fth_A 5 VGHGIDIEELASIESAVTRHEGFAKRVLTALEMERFTSLK-GRRQIEYLAGRWSAKEAFSKAMGTGISKLGFQDLEVLNN 83 (122)
T ss_dssp EEEEEEEEEHHHHHHHHHTTSSHHHHHSCHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHTSCSSSSCGGGCEEEEC
T ss_pred cceeEEEEEcchHHHHHHhhHHHHHHcCCHHHHHHHHcCC-cchHHHHHHHHHHHHHHHHHHhCCCccccccceEEEecC
Confidence 378999999976210 01146789999999999999976 345678899999999999999999997458999999987
Q ss_pred CCCcceE
Q 025416 232 VVKMGGF 238 (253)
Q Consensus 232 ~~~~g~~ 238 (253)
+...+.+
T Consensus 84 ~~g~P~l 90 (122)
T 1fth_A 84 ERGAPYF 90 (122)
T ss_dssp TTSCEEE
T ss_pred CCCCeEE
Confidence 6555554
No 5
>2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B
Probab=99.43 E-value=9.6e-14 Score=108.17 Aligned_cols=83 Identities=22% Similarity=0.309 Sum_probs=63.4
Q ss_pred cCCccchHHHHHhhhhhHHHHHHhcCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHhccCCC-CC-CCCCCeEEEEec
Q 025416 154 VPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRG-FS-AAPFNTFTIRAR 231 (253)
Q Consensus 154 ~~VGIDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~G-L~-~~~l~~~~v~~~ 231 (253)
..||||||.+.+. ......+++++||++|++.+...+. +.+.|+..|++|||++|++|+| +. +.++++++|..+
T Consensus 2 ~~iGiDI~~i~r~-~~~~~~~~~r~ft~~E~~~~~~~~~---~~~~la~rwaaKEA~~KAlg~g~~~~~~~~~~iei~~~ 77 (122)
T 2was_A 2 GGVGVDVELITSI-NVENDTFIERNFTPQEIEYCSAQPS---VQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRV 77 (122)
T ss_dssp CCEEEEEEEGGGC-CSSCHHHHHHHSCHHHHHHHHTSSS---HHHHHHHHHHHHHHHHHHHCC-------CCTTEEEEEE
T ss_pred CCeeEEEEEcchh-hhhhHHHHHHcCCHHHHHHHHcCCc---HHHHHHHHHHHHHHHHHHhCCCccCCCCCCCEEEEEEC
Confidence 5799999999762 2123578999999999999998753 4678999999999999999996 42 257899999987
Q ss_pred CCCcceEEE
Q 025416 232 VVKMGGFHH 240 (253)
Q Consensus 232 ~~~~g~~~~ 240 (253)
+...+.+.+
T Consensus 78 ~~G~P~l~l 86 (122)
T 2was_A 78 NKNAPAVEL 86 (122)
T ss_dssp TTEEEEEEE
T ss_pred CCCCeEEEE
Confidence 765555544
No 6
>3h88_A Holo-[acyl-carrier-protein] synthase; alpha-beta structure, structural genomics of infectious diseases, cytoplasm, fatty acid biosynthesis; HET: COA; 1.85A {Vibrio cholerae} PDB: 3ota_A* 3qmn_A*
Probab=99.42 E-value=3e-13 Score=106.54 Aligned_cols=84 Identities=29% Similarity=0.345 Sum_probs=68.3
Q ss_pred CCccchHHHHHhhh--hh-HHHHHHhcCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHhccCCCCC-CCCCCeEEEEe
Q 025416 155 PIGIDVEEKQRRLK--NK-ILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS-AAPFNTFTIRA 230 (253)
Q Consensus 155 ~VGIDIE~~~~~~~--~~-~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~-~~~l~~~~v~~ 230 (253)
.|||||+.+.+-.. .. -..+++++||++|++.+...+. +.+.|+..|++|||++|++|+|+. +.++++++|..
T Consensus 7 GiGiDIv~i~ri~~~~~r~~~~f~~r~ft~~E~~~~~~~~~---~~~~la~rwaaKEA~~KAlg~g~~~~~~~~dieI~~ 83 (129)
T 3h88_A 7 GLGTDIAEIERVEKALARSGENFARRILTDSELEQFHASKQ---QGRFLAKRFAAKEAASKALGTGIAQGVTFHDFTISH 83 (129)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHCSC---HHHHHHHHHHHHHHHHHHTTSCSCTTCCGGGEEEEE
T ss_pred EEEEEEEEcHHHHHHHHhhhHHHHHHhCCHHHHHHHhcCch---HHHHHHHHHHHHHHHHHHhccCccCCccceEEEEEE
Confidence 58999999986310 11 2578999999999999998763 567899999999999999999995 46789999998
Q ss_pred cCCCcceEEEe
Q 025416 231 RVVKMGGFHHF 241 (253)
Q Consensus 231 ~~~~~g~~~~~ 241 (253)
++...+.+.+.
T Consensus 84 ~~~G~P~~~l~ 94 (129)
T 3h88_A 84 DKLGKPLLILS 94 (129)
T ss_dssp CTTSCEEEEEC
T ss_pred CCCCCEEEEEC
Confidence 88777776654
No 7
>3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} SCOP: d.150.1.0
Probab=99.41 E-value=2.1e-13 Score=106.40 Aligned_cols=85 Identities=26% Similarity=0.321 Sum_probs=66.9
Q ss_pred CCccchHHHHHhhh--hhHHHHHHhcCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHhccCCCCC-CCCCCeEEEEec
Q 025416 155 PIGIDVEEKQRRLK--NKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS-AAPFNTFTIRAR 231 (253)
Q Consensus 155 ~VGIDIE~~~~~~~--~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~-~~~l~~~~v~~~ 231 (253)
.|||||+.+.+-.. .....+++++||++|++.+...+. ..+.+.|+..|++|||++|++|+|+. +.++++++|..+
T Consensus 7 giGiDiv~i~ri~~~~~~~~~f~~r~ft~~E~~~~~~~~~-~~~~~~la~rwaaKEA~~KAlg~G~~~~~~~~dieI~~~ 85 (122)
T 3hyk_A 7 GIGIDIIELNRIEKMLDGKLKFMERILTENERNVAKGLKG-SRLTEFVAGRFAAKEAYSKAVGTGIGKEVSFLDIEVRND 85 (122)
T ss_dssp EEEEEEEEHHHHHHHHC---CHHHHHSCHHHHHHHTTCCT-HHHHHHHHHHHHHHHHHHHHHTSCSSSSCCGGGCEEEEC
T ss_pred EEEEEEEEchHHHHHHHhhhhHHHHcCCHHHHHHHHhCCc-chHHHHHHHHHHHHHHHHHHhccCccCCcCceEEEEEEC
Confidence 68999999986210 112468999999999999998763 45678899999999999999999986 367899999988
Q ss_pred CCCcceEEE
Q 025416 232 VVKMGGFHH 240 (253)
Q Consensus 232 ~~~~g~~~~ 240 (253)
+...+.+.+
T Consensus 86 ~~G~P~v~l 94 (122)
T 3hyk_A 86 DRGKPILIT 94 (122)
T ss_dssp TTSCEEEEC
T ss_pred CCCCeEEEE
Confidence 766666543
No 8
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A*
Probab=99.40 E-value=2.4e-13 Score=105.47 Aligned_cols=83 Identities=25% Similarity=0.341 Sum_probs=66.8
Q ss_pred CCccchHHHHHhhhhhH----HHHHHhcCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHhccCCCCCC-CCCCeEEEE
Q 025416 155 PIGIDVEEKQRRLKNKI----LAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSA-APFNTFTIR 229 (253)
Q Consensus 155 ~VGIDIE~~~~~~~~~~----~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~~-~~l~~~~v~ 229 (253)
.||||||.+.+. .+. ..+++++||++|++.+.+.+ +..+.+.|+..|++|||+.|++|+|+.. .++++++|.
T Consensus 4 ~iGvDi~~i~r~--~~~~~~~~~~~~r~~t~~E~~~~~~~~-~~~~~~~la~rwaaKEA~~Kalg~g~~~~~~~~~i~i~ 80 (121)
T 1f7l_A 4 GIGLDITELKRI--ASMAGRQKRFAERILTRSELDQYYELS-EKRKNEFLAGRFAAKEAFSKAFGTGIGRQLSFQDIEIR 80 (121)
T ss_dssp EEEEEEEEHHHH--HHHHHHCTTHHHHHCCHHHHHHHTTSC-HHHHHHHHHHHHHHHHHHHHHHTSCSBTTBCGGGCEEE
T ss_pred eEEEeEEEchHH--HHHHHhhHHHHHHcCCHHHHHHHHccC-cccHHHHHHHHHHHHHHHHHHhCCCCCCCcceEEEEEE
Confidence 689999999863 122 46789999999999999876 3445667779999999999999999973 578999999
Q ss_pred ecCCCcceEEE
Q 025416 230 ARVVKMGGFHH 240 (253)
Q Consensus 230 ~~~~~~g~~~~ 240 (253)
.++...+.+.+
T Consensus 81 ~~~~G~P~l~~ 91 (121)
T 1f7l_A 81 KDQNGKPYIIC 91 (121)
T ss_dssp ECTTSCEEEEE
T ss_pred ECCCCCcEEEE
Confidence 88766665543
No 9
>2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii}
Probab=99.31 E-value=2.9e-12 Score=106.48 Aligned_cols=87 Identities=23% Similarity=0.292 Sum_probs=63.1
Q ss_pred cCCccchHHHHHhhhh---hHHHHHHhcCCHHHHHHHhcCCCh-----------hHHHHHHHHHHHHHHHHHhccCCCCC
Q 025416 154 VPIGIDVEEKQRRLKN---KILAFAKRYFSPDEVKLLTAISDP-----------EIQRQELIKLWTLKEAYVKAVGRGFS 219 (253)
Q Consensus 154 ~~VGIDIE~~~~~~~~---~~~~l~~~~fs~~E~~~l~~~~~~-----------~~~~~~f~~~Wt~KEA~~Ka~G~GL~ 219 (253)
..|||||+.+.+- .. ....+++++||++|++.+...+.. ..+.+.|...|++|||+.||+|+|+.
T Consensus 25 ~gIGvDIv~I~Ri-~~~l~r~~rf~~RifT~~E~~~~~~~~~~~~~~~~~~~~~~~~a~~lAgRfAAKEAv~KAlGtGi~ 103 (182)
T 2bdd_A 25 IGIGTDILCVNRI-YKILEKNINFIKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSMGRGLS 103 (182)
T ss_dssp EEEEEEEEEHHHH-HHHHHHCTTHHHHHSCHHHHHHHHTC-----------CHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred eceEEEEEEehhH-HHHHhccHHHHHhhCCHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 4789999999762 11 113688999999999999886532 01345567899999999999999997
Q ss_pred -----CCCCCeEEEEecCCCcceEEEe
Q 025416 220 -----AAPFNTFTIRARVVKMGGFHHF 241 (253)
Q Consensus 220 -----~~~l~~~~v~~~~~~~g~~~~~ 241 (253)
+.++++++|..++...+.+.+.
T Consensus 104 ~~~~~g~~~~dIEI~~d~~GkP~v~L~ 130 (182)
T 2bdd_A 104 SISKYGLSMNDIEIKNDKYGKPHVYLY 130 (182)
T ss_dssp ------CCGGGEEEEECTTSCEEEEEC
T ss_pred ccccCCcCcCEEEEEECCCCCEEEEEC
Confidence 3678999999888777777654
No 10
>3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* 4hc6_A
Probab=99.29 E-value=3.5e-12 Score=100.43 Aligned_cols=84 Identities=19% Similarity=0.166 Sum_probs=65.3
Q ss_pred CCccchHHHHHhhh---hhHHHHHHhcCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHhccCCCCCCC-------CCC
Q 025416 155 PIGIDVEEKQRRLK---NKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAA-------PFN 224 (253)
Q Consensus 155 ~VGIDIE~~~~~~~---~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~~~-------~l~ 224 (253)
.|||||+.+.+-.. ..-..++ ++||++|++.+...+ ..+.+.|...|++|||++|++|+|+.+. .++
T Consensus 4 giGiDIv~i~ri~~~~~r~~~~f~-r~ft~~E~~~~~~~~--~~~~~~la~rwAaKEA~~KAlg~g~~g~~~~~~~~~~~ 80 (129)
T 3gwm_A 4 GVGIDLVSIPDFAEQVDRPGTVFA-ETFTPGERRDAADKS--SSAARHLAARWAAKEAVIKAWSSSRFSKRPALPEGIHR 80 (129)
T ss_dssp EEEEEEEEHHHHHHHHTSCCHHHH-TTSCHHHHHHHTSTT--SHHHHHHHHHHHHHHHHHHHHHTSTTCCSSSCCTTHHH
T ss_pred EEEEEEEEchHHHHHHhhchhHHH-hhCCHHHHHHHHhCc--hhHHHHHHHHHHHHHHHHHHhccCccccccccCcccee
Confidence 58999999986210 0014678 999999999998753 3467789999999999999999998643 378
Q ss_pred eEEEEecCCCcceEEEe
Q 025416 225 TFTIRARVVKMGGFHHF 241 (253)
Q Consensus 225 ~~~v~~~~~~~g~~~~~ 241 (253)
+++|..++...+.+.+.
T Consensus 81 dIeI~~~~~G~P~v~l~ 97 (129)
T 3gwm_A 81 DIEVVTDMWGRPKVRLS 97 (129)
T ss_dssp HEEEEECTTSCEEEEEC
T ss_pred EEEEEECCCCCeEEEEC
Confidence 99999888777776654
No 11
>2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii}
Probab=99.29 E-value=3.4e-12 Score=104.38 Aligned_cols=88 Identities=24% Similarity=0.294 Sum_probs=66.0
Q ss_pred cCCccchHHHHHhhh--hhHHHHHHhcCCHHHHHHHhcCCChh-----------HHHHHHHHHHHHHHHHHhccCCCCC-
Q 025416 154 VPIGIDVEEKQRRLK--NKILAFAKRYFSPDEVKLLTAISDPE-----------IQRQELIKLWTLKEAYVKAVGRGFS- 219 (253)
Q Consensus 154 ~~VGIDIE~~~~~~~--~~~~~l~~~~fs~~E~~~l~~~~~~~-----------~~~~~f~~~Wt~KEA~~Ka~G~GL~- 219 (253)
..|||||+.+.+-.. .....+++++||++|++.+...+... .+.+.|...|++|||+.||+|+|+.
T Consensus 6 ~gIGiDIv~I~Ri~~~l~r~~~f~~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~lAgRfAAKEA~~KAlGtGi~~ 85 (163)
T 2qg8_A 6 IGIGTDILCVNRIYKILEKNINFIKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSMGRGLSS 85 (163)
T ss_dssp EEEEEEEEEHHHHHHHHHHCGGGHHHHSCHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBC-
T ss_pred CceEEeEEEehhHHHHHhccHHHHHhcCCHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 368999999876210 11136789999999999998876420 1245667899999999999999996
Q ss_pred ----CCCCCeEEEEecCCCcceEEEe
Q 025416 220 ----AAPFNTFTIRARVVKMGGFHHF 241 (253)
Q Consensus 220 ----~~~l~~~~v~~~~~~~g~~~~~ 241 (253)
+.++++++|..++...+.+.+.
T Consensus 86 ~~~~~~~~~dIeI~~d~~G~P~v~l~ 111 (163)
T 2qg8_A 86 ISKYGLSMNDIEIKNDKYGKPHVYLY 111 (163)
T ss_dssp ----CBCGGGEEEEECTTSCEEEEEC
T ss_pred cccCCccccEEEEEECCCCCEEEEEC
Confidence 3578999999888777777653
No 12
>2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A*
Probab=99.22 E-value=2.5e-12 Score=103.02 Aligned_cols=82 Identities=23% Similarity=0.193 Sum_probs=65.2
Q ss_pred CCccchHHHHHhhhhh---HHHHHHhcCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCeEEEEec
Q 025416 155 PIGIDVEEKQRRLKNK---ILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIRAR 231 (253)
Q Consensus 155 ~VGIDIE~~~~~~~~~---~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~~~~l~~~~v~~~ 231 (253)
.|||||+.+.+- ..- ...+++++||+.|++.+.+.+. +.+.|+..|++|||+.||+|+|.. .++++++|..+
T Consensus 25 giGiDIv~i~ri-~~~~~r~~~f~~rift~~E~~~~~~~~~---~~~~lAgRfAAKEAv~KAlG~G~~-~~~~dieI~~~ 99 (143)
T 2wds_A 25 GVGIDVAEVERF-GAALERTPALAGRLFLESELLLPGGERR---GVASLAARFAAKEALAKALGAPAG-LLWTDAEVWVE 99 (143)
T ss_dssp EEEEEEEEHHHH-HHHHHHCTTHHHHHCCGGGGBCTTSSBC---CHHHHHHHHHHHHHHHHHTTCCTT-CCGGGEEEEEC
T ss_pred ceEEEEEEehhH-HHHHhhhHHHHHhcCCHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhCCCCC-CCceEEEEEeC
Confidence 689999998762 111 1467899999999988877542 467899999999999999999965 78999999988
Q ss_pred CCCcceEEEe
Q 025416 232 VVKMGGFHHF 241 (253)
Q Consensus 232 ~~~~g~~~~~ 241 (253)
+...+.+.+.
T Consensus 100 ~~G~P~v~l~ 109 (143)
T 2wds_A 100 AGGRPRLRVT 109 (143)
T ss_dssp TTSCEEEEEC
T ss_pred CCCCcEEEEC
Confidence 8766666543
No 13
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A*
Probab=99.21 E-value=3.2e-11 Score=93.32 Aligned_cols=86 Identities=20% Similarity=0.337 Sum_probs=69.4
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcCC----CCCCcceEeeCCCCCceEecCCCCCCCCCCeE
Q 025416 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ----VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLH 136 (253)
Q Consensus 61 ~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~~----~~p~~i~~~~~~~GkP~l~~~~~~~~~~~~~~ 136 (253)
+.++|+++|++++.++. ++++.+|+++|+++|+++.+. .+.| +++.++++..+++|||++..... ....++
T Consensus 26 ~~r~~t~~E~~~~~~~~-~~~~~~~la~rwaaKEA~~Ka-lg~g~~~~~~~~~i~i~~~~~G~P~l~~~~~---~~~~~~ 100 (121)
T 1f7l_A 26 AERILTRSELDQYYELS-EKRKNEFLAGRFAAKEAFSKA-FGTGIGRQLSFQDIEIRKDQNGKPYIICTKL---SPAAVH 100 (121)
T ss_dssp HHHHCCHHHHHHHTTSC-HHHHHHHHHHHHHHHHHHHHH-HTSCSBTTBCGGGCEEEECTTSCEEEEETTT---EEEEEE
T ss_pred HHHcCCHHHHHHHHccC-cccHHHHHHHHHHHHHHHHHH-hCCCCCCCcceEEEEEEECCCCCcEEEECcc---ccCcEE
Confidence 35789999999999886 678999999999999999887 3333 56789999999999999975310 013689
Q ss_pred EEeccccCcceeEEe
Q 025416 137 FNISHTSSLVACGVT 151 (253)
Q Consensus 137 fSISHs~~~v~~avs 151 (253)
+||||+++|+++++.
T Consensus 101 ~SiSH~~~~a~A~v~ 115 (121)
T 1f7l_A 101 VSITHTKEYAAAQVV 115 (121)
T ss_dssp EEEEECSSEEEEEEE
T ss_pred EEEeCCCCcEEEEEE
Confidence 999999999776554
No 14
>3f09_A Holo-[acyl-carrier-protein] synthase; structural genomics, I deseases, fatty acid biosynthesis, lipid synthesis; 1.82A {Staphylococcus aureus subsp} PDB: 4dxe_A
Probab=99.20 E-value=3.5e-11 Score=96.33 Aligned_cols=83 Identities=22% Similarity=0.321 Sum_probs=66.9
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcCC----CCCCcceEeeCCCCCceEecCCCCCCCCCCeE
Q 025416 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ----VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLH 136 (253)
Q Consensus 61 ~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~~----~~p~~i~~~~~~~GkP~l~~~~~~~~~~~~~~ 136 (253)
+.++|+++|++.+.++..++++.+|+++|+++|+++.+. .+.| +.+.++++..++.|||++.... ..++
T Consensus 50 ~~rift~~E~~~~~~~~~~~~~~~~lA~RwAaKEA~~KA-lG~G~~~~~~~~dIeI~~d~~GkP~l~l~g------~~~~ 122 (143)
T 3f09_A 50 VERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKA-LGTGLGKHVAFNDIDCYNDELGKPKIDYEG------FIVH 122 (143)
T ss_dssp HHHHSCHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH-HC------CCGGGCCEEEC--CCEEECCTT------EEEE
T ss_pred HHHhCCHHHHHHhhccCchhhHHHHHHHHHHHHHHHHHH-hccCcccCcCcceEEEEECCCCCeEEEEcC------CcEE
Confidence 357899999999999877888999999999999999887 3333 5678999999999999998521 3789
Q ss_pred EEeccccCcceeEE
Q 025416 137 FNISHTSSLVACGV 150 (253)
Q Consensus 137 fSISHs~~~v~~av 150 (253)
+||||+++++++.+
T Consensus 123 vSISH~~~yAvA~v 136 (143)
T 3f09_A 123 VSISHTEHYAMSQV 136 (143)
T ss_dssp EEEEECSSEEEEEE
T ss_pred EEEECCCCEEEEEE
Confidence 99999999966544
No 15
>3ota_A Holo-[acyl-carrier-protein] synthase; structural genomics, center for structural genomics of infec diseases, csgid; HET: COA; 1.85A {Vibrio cholerae o1 biovar el tor} PDB: 3qmn_A*
Probab=99.14 E-value=1.2e-10 Score=91.60 Aligned_cols=84 Identities=29% Similarity=0.350 Sum_probs=66.1
Q ss_pred CCccchHHHHHh---hhhhHHHHHHhcCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHhccCCCCC-CCCCCeEEEEe
Q 025416 155 PIGIDVEEKQRR---LKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS-AAPFNTFTIRA 230 (253)
Q Consensus 155 ~VGIDIE~~~~~---~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~-~~~l~~~~v~~ 230 (253)
.|||||..+.+- ....-..+++++||++|++....... +.+.+...|++|||+.||+|+|+. +..+++++|..
T Consensus 7 GIG~Div~i~Ri~~~l~r~g~~F~~Rift~~E~~~~~~~~~---~~~~lA~RfAAKEA~~KAlGtg~~~~~~~~dIeI~~ 83 (129)
T 3ota_A 7 GLGTDIAEIERVEKALARSGENFARRILTDSELEQFHASKQ---QGRFLAKRFAAKEAASKALGTGIAQGVTFHDFTISH 83 (129)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHCSC---HHHHHHHHHHHHHHHHHHHTSCSCTTCCGGGEEEEE
T ss_pred EEeeEeeEHHHHHHHHHhhCHHHHHHCCCHHHHHHHHhccc---hHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEEE
Confidence 579999877652 11112568899999999999988654 456788899999999999999996 35689999999
Q ss_pred cCCCcceEEEe
Q 025416 231 RVVKMGGFHHF 241 (253)
Q Consensus 231 ~~~~~g~~~~~ 241 (253)
++...+.+.+.
T Consensus 84 d~~GkP~v~l~ 94 (129)
T 3ota_A 84 DKLGKPLLILS 94 (129)
T ss_dssp CTTCCEEEEEC
T ss_pred CCCCCceEEeC
Confidence 88887777654
No 16
>3nfd_A Phosphopantetheine protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A*
Probab=99.11 E-value=2.2e-11 Score=98.48 Aligned_cols=86 Identities=17% Similarity=0.252 Sum_probs=64.7
Q ss_pred CCccchHHHHHhhhhh----HHHHHHhcCCHHHHHHHhcCCCh----------hHHHHHHHHHHHHHHHHHhccCCCCC-
Q 025416 155 PIGIDVEEKQRRLKNK----ILAFAKRYFSPDEVKLLTAISDP----------EIQRQELIKLWTLKEAYVKAVGRGFS- 219 (253)
Q Consensus 155 ~VGIDIE~~~~~~~~~----~~~l~~~~fs~~E~~~l~~~~~~----------~~~~~~f~~~Wt~KEA~~Ka~G~GL~- 219 (253)
.|||||+.+.+ +..- -..+ +++||++|++.+...+.. ..+.+.|...|++|||+.||+|+|+.
T Consensus 9 GIGiDIv~I~R-i~~~l~r~g~~f-~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~lAgrfAAKEA~~KAlg~g~~g 86 (153)
T 3nfd_A 9 TVGVDLVHIPG-FAEQLSRPGSTF-EQVFSPLERRHAQTRRSAAADATNSSLAGSRTEHLAGRWAAKEAFIKAWSQAIYG 86 (153)
T ss_dssp EEEEEEEEHHH-HHHHHTSTTCGG-GGSSCHHHHHHHHCC------------CCTTHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEEEEeHH-HHHHHhhccHHH-HhhCCHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 68999999876 2110 1346 899999999999886531 12467889999999999999999884
Q ss_pred --------CCCCCeEEEEecCCCcceEEEec
Q 025416 220 --------AAPFNTFTIRARVVKMGGFHHFD 242 (253)
Q Consensus 220 --------~~~l~~~~v~~~~~~~g~~~~~~ 242 (253)
+..+++++|..++...+.+.+..
T Consensus 87 ~~~~~~~~~~~~~dIeI~~d~~G~P~v~l~g 117 (153)
T 3nfd_A 87 KPPVIEPDLVNFAEIEVLPDRWGRVALQLKG 117 (153)
T ss_dssp SCCSSCGGGCCGGGEEEEECTTSCEEEEECH
T ss_pred ccccccccCCcceEEEEEECCCCCeEEEECH
Confidence 35679999998887777776654
No 17
>3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} SCOP: d.150.1.0
Probab=99.03 E-value=9.3e-10 Score=85.62 Aligned_cols=83 Identities=14% Similarity=0.203 Sum_probs=67.0
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcCC----CCCCcceEeeCCCCCceEecCCCCCCCCCCeE
Q 025416 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ----VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLH 136 (253)
Q Consensus 61 ~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~~----~~p~~i~~~~~~~GkP~l~~~~~~~~~~~~~~ 136 (253)
+.++|++.|++.+.... .+++.+++++|+++|+++.+. .+.| +.+.++++..++.|||++.... ...++
T Consensus 29 ~~r~ft~~E~~~~~~~~-~~~~~~~la~rwaaKEA~~KA-lg~G~~~~~~~~dieI~~~~~G~P~v~l~~-----~~~~~ 101 (122)
T 3hyk_A 29 MERILTENERNVAKGLK-GSRLTEFVAGRFAAKEAYSKA-VGTGIGKEVSFLDIEVRNDDRGKPILITST-----EHIVH 101 (122)
T ss_dssp HHHHSCHHHHHHHTTCC-THHHHHHHHHHHHHHHHHHHH-HTSCSSSSCCGGGCEEEECTTSCEEEECSC-----SSEEE
T ss_pred HHHcCCHHHHHHHHhCC-cchHHHHHHHHHHHHHHHHHH-hccCccCCcCceEEEEEECCCCCeEEEEcC-----CCCEE
Confidence 34789999999998764 567889999999999999877 3333 6678999999999999998531 25789
Q ss_pred EEeccccCcceeEE
Q 025416 137 FNISHTSSLVACGV 150 (253)
Q Consensus 137 fSISHs~~~v~~av 150 (253)
+||||+++++++.+
T Consensus 102 vSISH~~~~A~A~v 115 (122)
T 3hyk_A 102 LSISHSKEFAVAQV 115 (122)
T ss_dssp EEEEECSSEEEEEE
T ss_pred EEEECCCCEEEEEE
Confidence 99999999965443
No 18
>1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A*
Probab=98.93 E-value=3.7e-09 Score=81.85 Aligned_cols=83 Identities=16% Similarity=0.217 Sum_probs=67.4
Q ss_pred hccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcCC---CCCCcceEeeCCCCCceEecCCCCCCCCCCeEEE
Q 025416 62 SELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ---VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLHFN 138 (253)
Q Consensus 62 ~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~~---~~p~~i~~~~~~~GkP~l~~~~~~~~~~~~~~fS 138 (253)
.++|+++|++.+.+.. ++++.+++++|+++|+++.+. .|.| +++.++++..+++|+|++.... ....+++|
T Consensus 29 ~r~~t~~E~~~~~~~~-~~~~~~~~a~rwaaKEA~~Ka-lG~gl~~~~~~~i~i~~~~~g~P~l~~~~----~~~~~~~S 102 (122)
T 1fth_A 29 KRVLTALEMERFTSLK-GRRQIEYLAGRWSAKEAFSKA-MGTGISKLGFQDLEVLNNERGAPYFSQAP----FSGKIWLS 102 (122)
T ss_dssp HHHSCHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHH-HTSCSSSSCGGGCEEEECTTSCEEEEECS----CCSEEEEE
T ss_pred HHcCCHHHHHHHHcCC-cchHHHHHHHHHHHHHHHHHH-hCCCccccccceEEEecCCCCCeEEEecC----CCCeEEEE
Confidence 4789999999998864 578899999999999999887 4444 5678899999999999997531 11378999
Q ss_pred eccccCcceeEE
Q 025416 139 ISHTSSLVACGV 150 (253)
Q Consensus 139 ISHs~~~v~~av 150 (253)
|||+++++++.+
T Consensus 103 ish~~~ya~A~v 114 (122)
T 1fth_A 103 ISHTDQFVTASV 114 (122)
T ss_dssp EEECSSEEEEEE
T ss_pred EECCCCCEEEEE
Confidence 999999975443
No 19
>3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* 4hc6_A
Probab=98.89 E-value=3.6e-09 Score=83.11 Aligned_cols=85 Identities=15% Similarity=0.252 Sum_probs=65.2
Q ss_pred ccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcCCC----------CCCcceEeeCCCCCceEecCCCC--CC
Q 025416 63 ELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQV----------NPRSLKFKKTIYGKPEVDWENGD--KW 130 (253)
Q Consensus 63 ~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~~~----------~p~~i~~~~~~~GkP~l~~~~~~--~~ 130 (253)
++|++.|++.+... ++++.+++++|+++|+++.+. .+.|+ .+.++++.+++.|||++...... ..
T Consensus 28 r~ft~~E~~~~~~~--~~~~~~~la~rwAaKEA~~KA-lg~g~~g~~~~~~~~~~~dIeI~~~~~G~P~v~l~g~~~~~~ 104 (129)
T 3gwm_A 28 ETFTPGERRDAADK--SSSAARHLAARWAAKEAVIKA-WSSSRFSKRPALPEGIHRDIEVVTDMWGRPKVRLSGEIAKHL 104 (129)
T ss_dssp TTSCHHHHHHHTST--TSHHHHHHHHHHHHHHHHHHH-HHTSTTCCSSSCCTTHHHHEEEEECTTSCEEEEECHHHHHHT
T ss_pred hhCCHHHHHHHHhC--chhHHHHHHHHHHHHHHHHHH-hccCccccccccCccceeEEEEEECCCCCeEEEECHHHHHhc
Confidence 89999999998762 567889999999999999887 44443 36789999999999999853210 00
Q ss_pred CCCCeEEEeccccCcceeEE
Q 025416 131 CPPPLHFNISHTSSLVACGV 150 (253)
Q Consensus 131 ~~~~~~fSISHs~~~v~~av 150 (253)
....+++||||+++++++.+
T Consensus 105 ~~~~~~vSISH~~~~A~A~v 124 (129)
T 3gwm_A 105 EDVTIHVSLTHEDQTAAAVA 124 (129)
T ss_dssp TTCEEEEEEEEETTEEEEEE
T ss_pred CCCcEEEEEeCCCCEEEEEE
Confidence 02468999999999965443
No 20
>3ota_A Holo-[acyl-carrier-protein] synthase; structural genomics, center for structural genomics of infec diseases, csgid; HET: COA; 1.85A {Vibrio cholerae o1 biovar el tor} PDB: 3qmn_A*
Probab=98.88 E-value=2.2e-09 Score=84.27 Aligned_cols=85 Identities=13% Similarity=0.148 Sum_probs=65.3
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcC----CCCCCcceEeeCCCCCceEecCCC-----CCCC
Q 025416 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC----QVNPRSLKFKKTIYGKPEVDWENG-----DKWC 131 (253)
Q Consensus 61 ~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~----~~~p~~i~~~~~~~GkP~l~~~~~-----~~~~ 131 (253)
+.++|++.|++.+...+ ++.+|+++|+++|+++...+ +. |+.+.+|++..++.|||++..... ....
T Consensus 30 ~~Rift~~E~~~~~~~~---~~~~~lA~RfAAKEA~~KAl-Gtg~~~~~~~~dIeI~~d~~GkP~v~l~g~~~~~~~~~~ 105 (129)
T 3ota_A 30 ARRILTDSELEQFHASK---QQGRFLAKRFAAKEAASKAL-GTGIAQGVTFHDFTISHDKLGKPLLILSGQAAELASQLQ 105 (129)
T ss_dssp HHHHSCHHHHHHHHHCS---CHHHHHHHHHHHHHHHHHHH-TSCSCTTCCGGGEEEEECTTCCEEEEECHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHh-cccCCCCCCceEEEEEECCCCCceEEeChHHHHHHHHcC
Confidence 45799999999887653 46789999999999998873 33 467789999999999999964211 0012
Q ss_pred CCCeEEEeccccCcceeE
Q 025416 132 PPPLHFNISHTSSLVACG 149 (253)
Q Consensus 132 ~~~~~fSISHs~~~v~~a 149 (253)
...+++||||+++++++.
T Consensus 106 ~~~i~lSiSh~~~~AiA~ 123 (129)
T 3ota_A 106 VENIHLSISDERHYAMAT 123 (129)
T ss_dssp CCEEEEEEEECSSEEEEE
T ss_pred CCeEEEEEeCCCCeEEEE
Confidence 346899999999996543
No 21
>3h88_A Holo-[acyl-carrier-protein] synthase; alpha-beta structure, structural genomics of infectious diseases, cytoplasm, fatty acid biosynthesis; HET: COA; 1.85A {Vibrio cholerae} PDB: 3ota_A* 3qmn_A*
Probab=98.83 E-value=8.9e-09 Score=80.81 Aligned_cols=86 Identities=14% Similarity=0.158 Sum_probs=65.6
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcC----CCCCCcceEeeCCCCCceEecCCCC-----CCC
Q 025416 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC----QVNPRSLKFKKTIYGKPEVDWENGD-----KWC 131 (253)
Q Consensus 61 ~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~----~~~p~~i~~~~~~~GkP~l~~~~~~-----~~~ 131 (253)
+.++|+++|++.+.... ++.+++++|+++|+++.+. .+. ++.+.++++..++.|||++...... ..+
T Consensus 30 ~~r~ft~~E~~~~~~~~---~~~~~la~rwaaKEA~~KA-lg~g~~~~~~~~dieI~~~~~G~P~~~l~g~~~~~~~~~g 105 (129)
T 3h88_A 30 ARRILTDSELEQFHASK---QQGRFLAKRFAAKEAASKA-LGTGIAQGVTFHDFTISHDKLGKPLLILSGQAAELASQLQ 105 (129)
T ss_dssp HHHHSCHHHHHHHHHCS---CHHHHHHHHHHHHHHHHHH-TTSCSCTTCCGGGEEEEECTTSCEEEEECHHHHHHHHHTT
T ss_pred HHHhCCHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHH-hccCccCCccceEEEEEECCCCCEEEEECHHHHHHHHHcC
Confidence 35799999999988764 4688999999999999887 333 3567899999999999999853100 011
Q ss_pred CCCeEEEeccccCcceeEE
Q 025416 132 PPPLHFNISHTSSLVACGV 150 (253)
Q Consensus 132 ~~~~~fSISHs~~~v~~av 150 (253)
...+++||||+++++++.+
T Consensus 106 ~~~~~vSISH~~~~A~A~v 124 (129)
T 3h88_A 106 VENIHLSISDERHYAMATV 124 (129)
T ss_dssp CCEEEEEEEECSSEEEEEE
T ss_pred CCEEEEEEECCCCeEEEEE
Confidence 3478999999999965443
No 22
>2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B
Probab=98.75 E-value=2.3e-08 Score=77.52 Aligned_cols=86 Identities=9% Similarity=0.095 Sum_probs=64.5
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcC-----CCCCCcceEeeCCCCCceEecCCCC-----CC
Q 025416 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC-----QVNPRSLKFKKTIYGKPEVDWENGD-----KW 130 (253)
Q Consensus 61 ~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~-----~~~p~~i~~~~~~~GkP~l~~~~~~-----~~ 130 (253)
+.++|++.|++.+.... ++.+++++|+.+|+++.+. .+. ++++.++++..++.|+|++...... ..
T Consensus 22 ~~r~ft~~E~~~~~~~~---~~~~~la~rwaaKEA~~KA-lg~g~~~~~~~~~~iei~~~~~G~P~l~l~g~~~~~~~~~ 97 (122)
T 2was_A 22 IERNFTPQEIEYCSAQP---SVQSSFAGTWSAKEAVFKS-LGVKSLGGGAALKDIEIVRVNKNAPAVELHGNAKKAAEEA 97 (122)
T ss_dssp HHHHSCHHHHHHHHTSS---SHHHHHHHHHHHHHHHHHH-HCC-------CCTTEEEEEETTEEEEEEECHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHcCC---cHHHHHHHHHHHHHHHHHH-hCCCccCCCCCCCEEEEEECCCCCeEEEEChHHHHHHHHc
Confidence 45789999999988653 4578999999999999887 333 2677899999999999999742110 01
Q ss_pred CCCCeEEEeccccCcceeEE
Q 025416 131 CPPPLHFNISHTSSLVACGV 150 (253)
Q Consensus 131 ~~~~~~fSISHs~~~v~~av 150 (253)
+...+++||||+++++++.+
T Consensus 98 ~~~~~~vSiSH~~~~A~A~v 117 (122)
T 2was_A 98 GVTDVKVSISHDDLQAVAVA 117 (122)
T ss_dssp TCCEEEEEEEECSSEEEEEE
T ss_pred CCCeEEEEEEcCCCcEEEEE
Confidence 12478999999999965443
No 23
>2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii}
Probab=98.74 E-value=1.9e-08 Score=82.10 Aligned_cols=89 Identities=13% Similarity=0.145 Sum_probs=61.9
Q ss_pred HhccCCHHHHHHHhccCCh-----------HHHHHHHHHHHHHHHHHHhchhcCC--------CCCCcceEeeCCCCCce
Q 025416 61 YSELLSPREKKNLYHMQGD-----------QFKKSALLARVLVRTTIARYQTNCQ--------VNPRSLKFKKTIYGKPE 121 (253)
Q Consensus 61 ~~~~Ls~~E~~r~~r~~~~-----------~~r~~~l~~R~llr~~L~~~~~~~~--------~~p~~i~~~~~~~GkP~ 121 (253)
+.++|++.|++.+.....+ +++.+|+++|+++|+++.+. .+.| +.+.++++..++.|+|+
T Consensus 29 ~~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~lAgRfAAKEA~~KA-lGtGi~~~~~~~~~~~dIeI~~d~~G~P~ 107 (163)
T 2qg8_A 29 IKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKS-MGRGLSSISKYGLSMNDIEIKNDKYGKPH 107 (163)
T ss_dssp HHHHSCHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCBC-----CBCGGGEEEEECTTSCEE
T ss_pred HHhcCCHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHHH-hcCCCcccccCCccccEEEEEECCCCCEE
Confidence 3478999999998876543 24578999999999999887 3343 45689999999999999
Q ss_pred EecCCCC-----CCCCCCeEEEeccccCcceeEE
Q 025416 122 VDWENGD-----KWCPPPLHFNISHTSSLVACGV 150 (253)
Q Consensus 122 l~~~~~~-----~~~~~~~~fSISHs~~~v~~av 150 (253)
+...... ..+...+++||||++++++..+
T Consensus 108 v~l~g~a~~~~~~~g~~~i~lSISHd~~~avA~v 141 (163)
T 2qg8_A 108 VYLYGKAKKVAYEMGIVKIFLSISDEKIINSQTN 141 (163)
T ss_dssp EEECHHHHHHHHHTTCCEEEEEEEEEEC------
T ss_pred EEEChHHHHHHHHcCCCEEEEEEECCCCcEEEEE
Confidence 8642100 0123478999999999966544
No 24
>2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii}
Probab=98.70 E-value=2e-08 Score=83.23 Aligned_cols=89 Identities=13% Similarity=0.145 Sum_probs=60.2
Q ss_pred HhccCCHHHHHHHhccCCh-----------HHHHHHHHHHHHHHHHHHhchhcCC--------CCCCcceEeeCCCCCce
Q 025416 61 YSELLSPREKKNLYHMQGD-----------QFKKSALLARVLVRTTIARYQTNCQ--------VNPRSLKFKKTIYGKPE 121 (253)
Q Consensus 61 ~~~~Ls~~E~~r~~r~~~~-----------~~r~~~l~~R~llr~~L~~~~~~~~--------~~p~~i~~~~~~~GkP~ 121 (253)
+.++|++.|++.+...... +++.+|+++|+++|+++.+. .+.| +.+.+|+|..++.|||+
T Consensus 48 ~~RifT~~E~~~~~~~~~~~~~~~~~~~~~~~~a~~lAgRfAAKEAv~KA-lGtGi~~~~~~g~~~~dIEI~~d~~GkP~ 126 (182)
T 2bdd_A 48 IKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKS-MGRGLSSISKYGLSMNDIEIKNDKYGKPH 126 (182)
T ss_dssp HHHHSCHHHHHHHHTC-----------CHHHHHHHHHHHHHHHHHHHHHH-TTC---------CCGGGEEEEECTTSCEE
T ss_pred HHhhCCHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHHH-hCCCccccccCCcCcCEEEEEECCCCCEE
Confidence 3578999999998876433 24678999999999999887 3443 45689999999999999
Q ss_pred EecCCCC-----CCCCCCeEEEeccccCcceeEE
Q 025416 122 VDWENGD-----KWCPPPLHFNISHTSSLVACGV 150 (253)
Q Consensus 122 l~~~~~~-----~~~~~~~~fSISHs~~~v~~av 150 (253)
+...... ..+...+++||||++++++..|
T Consensus 127 v~L~g~a~~~~~~~gi~~i~lSISHd~~yavA~V 160 (182)
T 2bdd_A 127 VYLYGKAKKVAYEMGIVKIFLSISDEKIINSQTN 160 (182)
T ss_dssp EEECHHHHHHHHHHTCCEEEEEEEEEC-------
T ss_pred EEECHHHHHHHHHcCCCEEEEEEECCCCcEEEEE
Confidence 8642100 0012478999999999966554
No 25
>3nfd_A Phosphopantetheine protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A*
Probab=98.66 E-value=2.7e-08 Score=80.31 Aligned_cols=89 Identities=12% Similarity=0.126 Sum_probs=63.0
Q ss_pred hccCCHHHHHHHhccCCh----------HHHHHHHHHHHHHHHHHHhch-hc----------CCCCCCcceEeeCCCCCc
Q 025416 62 SELLSPREKKNLYHMQGD----------QFKKSALLARVLVRTTIARYQ-TN----------CQVNPRSLKFKKTIYGKP 120 (253)
Q Consensus 62 ~~~Ls~~E~~r~~r~~~~----------~~r~~~l~~R~llr~~L~~~~-~~----------~~~~p~~i~~~~~~~GkP 120 (253)
.++|++.|++.+...... .++.+|+++|+++|+++.+.+ ++ .++.+.+|++..++.|||
T Consensus 32 ~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~lAgrfAAKEA~~KAlg~g~~g~~~~~~~~~~~~~dIeI~~d~~G~P 111 (153)
T 3nfd_A 32 EQVFSPLERRHAQTRRSAAADATNSSLAGSRTEHLAGRWAAKEAFIKAWSQAIYGKPPVIEPDLVNFAEIEVLPDRWGRV 111 (153)
T ss_dssp GGSSCHHHHHHHHCC------------CCTTHHHHHHHHHHHHHHHHHHHHHTTTSCCSSCGGGCCGGGEEEEECTTSCE
T ss_pred HhhCCHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHhccccccccccccccCCcceEEEEEECCCCCe
Confidence 478999999998876432 247899999999999998774 12 246678999999999999
Q ss_pred eEecCCCCC--CCCCCeEE----EeccccCcceeEE
Q 025416 121 EVDWENGDK--WCPPPLHF----NISHTSSLVACGV 150 (253)
Q Consensus 121 ~l~~~~~~~--~~~~~~~f----SISHs~~~v~~av 150 (253)
++....... .....+++ ||||+++++++.|
T Consensus 112 ~v~l~g~~~~~~~~~~~~v~~~lSISHd~~~AvA~v 147 (153)
T 3nfd_A 112 ALQLKGEVAAKLQESIGDVELALSISHDGDYATALC 147 (153)
T ss_dssp EEEECHHHHHHHHHHHCSEEEEEEEEEETTEEEEEE
T ss_pred EEEECHHHHHHcCCceEEECCceEecCCCCEEEEEE
Confidence 997421000 00013567 9999999965433
No 26
>2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A*
Probab=98.64 E-value=8.6e-09 Score=82.34 Aligned_cols=86 Identities=12% Similarity=0.037 Sum_probs=63.2
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhch-hcCCCCCCcceEeeCCCCCceEecCCCC-----CCCCCC
Q 025416 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQ-TNCQVNPRSLKFKKTIYGKPEVDWENGD-----KWCPPP 134 (253)
Q Consensus 61 ~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~-~~~~~~p~~i~~~~~~~GkP~l~~~~~~-----~~~~~~ 134 (253)
+.++|++.|++.+... +++.+|+++|+++|+++.+.+ .+.++.+.++++..++.|+|++...... ..+...
T Consensus 47 ~~rift~~E~~~~~~~---~~~~~~lAgRfAAKEAv~KAlG~G~~~~~~dieI~~~~~G~P~v~l~g~~~~~~~~~g~~~ 123 (143)
T 2wds_A 47 AGRLFLESELLLPGGE---RRGVASLAARFAAKEALAKALGAPAGLLWTDAEVWVEAGGRPRLRVTGTVAARAAELGVAS 123 (143)
T ss_dssp HHHHCCGGGGBCTTSS---BCCHHHHHHHHHHHHHHHHHTTCCTTCCGGGEEEEECTTSCEEEEECHHHHHHHHHHTCCE
T ss_pred HHhcCCHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCCCcEEEEChHHHHHHHhcCCCe
Confidence 3478999999876653 356899999999999999862 1234567899999999999998532100 001237
Q ss_pred eEEEeccccCcceeE
Q 025416 135 LHFNISHTSSLVACG 149 (253)
Q Consensus 135 ~~fSISHs~~~v~~a 149 (253)
+++||||+++++++.
T Consensus 124 ~~vSISH~~~~AvA~ 138 (143)
T 2wds_A 124 WHVSLSADAGIASAV 138 (143)
T ss_dssp EEEEEEEETTEEEEE
T ss_pred EEEEEECCCCcEEEE
Confidence 899999999996544
No 27
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=98.28 E-value=9.7e-08 Score=101.71 Aligned_cols=85 Identities=21% Similarity=0.293 Sum_probs=0.0
Q ss_pred ccCCccchHHHHHhhhhhHHHHHHhcCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHhccCCC-CC-CCCCCeEEEEe
Q 025416 153 NVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRG-FS-AAPFNTFTIRA 230 (253)
Q Consensus 153 ~~~VGIDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~G-L~-~~~l~~~~v~~ 230 (253)
+..|||||+.+.+ +...-..+++++||+.|++++...+. +.+.|...|++|||+.||+|+| +. +..+++|+|..
T Consensus 1758 ~~GIGiDIveI~R-i~~~~~~F~~RifT~~E~~~~~~~~~---~~~~lAgRfAAKEA~~KAlGtG~~~~g~~~~dIeI~~ 1833 (1878)
T 2uv9_A 1758 ASRVGVDVESVDS-INIDNEEFISRNFTEREQAYCRRAPN---PRASFAGRWTAKEAIFKSLGVASKGAGAAMREIEVIN 1833 (1878)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeEEeeeeHH-HhhhhhHHHHHcCCHHHHHHHHhCcc---HHHHHHHHHHHHHHHHHHhccCcCCCCCCccEEEEEE
Confidence 4689999999986 32234578999999999999887542 3467888999999999999996 43 25789999987
Q ss_pred cCCCcceEEEe
Q 025416 231 RVVKMGGFHHF 241 (253)
Q Consensus 231 ~~~~~g~~~~~ 241 (253)
++...+.|.+.
T Consensus 1834 d~~G~P~v~l~ 1844 (1878)
T 2uv9_A 1834 DANGAPEVHLH 1844 (1878)
T ss_dssp -----------
T ss_pred CCCCCeEEEEC
Confidence 77666655443
No 28
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=97.98 E-value=9.1e-07 Score=94.50 Aligned_cols=85 Identities=22% Similarity=0.337 Sum_probs=0.0
Q ss_pred ccCCccchHHHHHhhhhhHHHHHHhcCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHhccCCC-CC-CCCCCeEEEEe
Q 025416 153 NVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRG-FS-AAPFNTFTIRA 230 (253)
Q Consensus 153 ~~~VGIDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~G-L~-~~~l~~~~v~~ 230 (253)
+..|||||..+.+ +...-..+++++||+.|+++..+... ..+.+...|++|||+.||+|+| +. +..+++++|..
T Consensus 1766 ~~GIGiDIveI~R-i~~~~~~F~~RifT~~E~~~~~~~~~---~~~~lAgRfAAKEA~~KAlGtgg~~~~~~~~dIeI~~ 1841 (1887)
T 2uv8_A 1766 NGGVGVDVELITS-INVENDTFIERNFTPQEIEYCSAQPS---VQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVR 1841 (1887)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeeeeeecHH-HhhhchHHHHHcCCHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhCcCcCCCCCCccEEEEEE
Confidence 3589999999976 33233578899999999998876432 3456778999999999999994 43 25688999987
Q ss_pred cCCCcceEEEe
Q 025416 231 RVVKMGGFHHF 241 (253)
Q Consensus 231 ~~~~~g~~~~~ 241 (253)
++..++.|.+.
T Consensus 1842 ~~~G~P~v~l~ 1852 (1887)
T 2uv8_A 1842 VNKNAPAVELH 1852 (1887)
T ss_dssp -----------
T ss_pred CCCCCeEEEEC
Confidence 77666666554
No 29
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1
Probab=97.78 E-value=0.00019 Score=61.01 Aligned_cols=87 Identities=7% Similarity=0.056 Sum_probs=67.2
Q ss_pred HHHhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcCC--CCCCcceEeeCCCCCceEecCCCCCCCCCCeE
Q 025416 59 SQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ--VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLH 136 (253)
Q Consensus 59 ~~~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~~--~~p~~i~~~~~~~GkP~l~~~~~~~~~~~~~~ 136 (253)
..+.+++++.|++.+.+.. ..++.+++..++.+|+++.+. .|.| .++.++++..++.|+|.+..+.. ...++
T Consensus 117 ~~~~~~~t~~E~~~l~~~~-~~~~~~~~~~~wt~KEA~~Ka-~G~gl~~~~~~~~i~~~~~g~~~~~~~~~----~~~~~ 190 (228)
T 1qr0_A 117 EIAKRFFSKTEYSDLLAKD-KDEQTDYFYHLWSMKESFIKQ-EGKGLSLPLDSFSVRLHQDGQVSIELPDS----HSPCY 190 (228)
T ss_dssp HHHSSSSCHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHHHH-HCSTTSCCSSCCEEEECGGGCEEEECSCT----TSCCE
T ss_pred HHHHHhCCHHHHHHHHhCC-hhhHHHHHHHHHHHHHHHHHH-hCCCCCCCCceEEEeeCCCCCeEEecCCC----CCCeE
Confidence 4456799999999988763 457788999999999999887 4444 56788999999999999985421 23566
Q ss_pred E-EeccccCcceeEEe
Q 025416 137 F-NISHTSSLVACGVT 151 (253)
Q Consensus 137 f-SISHs~~~v~~avs 151 (253)
+ ++||++++++..+.
T Consensus 191 ~~s~~~~~~y~~Av~~ 206 (228)
T 1qr0_A 191 IKTYEVDPGYKMAVCA 206 (228)
T ss_dssp EEEECSCTTEEEEEEE
T ss_pred EEEEecCCCEEEEEEE
Confidence 5 99999999655444
No 30
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=97.51 E-value=1.4e-05 Score=85.54 Aligned_cols=84 Identities=10% Similarity=0.109 Sum_probs=0.0
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcC-----CCCCCcceEeeCCCCCceEecCCCC-----CC
Q 025416 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC-----QVNPRSLKFKKTIYGKPEVDWENGD-----KW 130 (253)
Q Consensus 61 ~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~-----~~~p~~i~~~~~~~GkP~l~~~~~~-----~~ 130 (253)
+.++|++.|++.+.+. +++.+++++|+++|+++.+.+ +. ++.+.+|+|.+++.|||++...... ..
T Consensus 1787 ~~RifT~~E~~~~~~~---~~~~~~lAgRfAAKEA~~KAl-Gtgg~~~~~~~~dIeI~~~~~G~P~v~l~g~~~~~~~~~ 1862 (1887)
T 2uv8_A 1787 IERNFTPQEIEYCSAQ---PSVQSSFAGTWSAKEAVFKSL-GVKSLGGGAALKDIEIVRVNKNAPAVELHGNAKKAAEEA 1862 (1887)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHcCCHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHh-CcCcCCCCCCccEEEEEECCCCCeEEEECHHHHHHHHHc
Confidence 4579999999887653 456789999999999998873 32 4677899999999999998753211 01
Q ss_pred CCCCeEEEeccccCccee
Q 025416 131 CPPPLHFNISHTSSLVAC 148 (253)
Q Consensus 131 ~~~~~~fSISHs~~~v~~ 148 (253)
+...+++||||++++++.
T Consensus 1863 g~~~i~lSISH~~~~A~A 1880 (1887)
T 2uv8_A 1863 GVTDVKVSISHDDLQAVA 1880 (1887)
T ss_dssp ------------------
T ss_pred CCCEEEEEEECCCCcEEE
Confidence 224689999999999654
No 31
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=97.42 E-value=2e-05 Score=84.18 Aligned_cols=84 Identities=15% Similarity=0.168 Sum_probs=0.0
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcC-----CCCCCcceEeeCCCCCceEecCCCCC-----C
Q 025416 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC-----QVNPRSLKFKKTIYGKPEVDWENGDK-----W 130 (253)
Q Consensus 61 ~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~-----~~~p~~i~~~~~~~GkP~l~~~~~~~-----~ 130 (253)
+.++|++.|++.+.+. .++.+++++|+++|+++.+.+ +. ++.+.+|+|.+++.|||++....... .
T Consensus 1779 ~~RifT~~E~~~~~~~---~~~~~~lAgRfAAKEA~~KAl-GtG~~~~g~~~~dIeI~~d~~G~P~v~l~g~a~~~~~~~ 1854 (1878)
T 2uv9_A 1779 ISRNFTEREQAYCRRA---PNPRASFAGRWTAKEAIFKSL-GVASKGAGAAMREIEVINDANGAPEVHLHGAAAEAAKQA 1854 (1878)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHcCCHHHHHHHHhC---ccHHHHHHHHHHHHHHHHHHh-ccCcCCCCCCccEEEEEECCCCCeEEEECHHHHHHHHHc
Confidence 4579999999888754 356789999999999998873 33 35778999999999999986532210 1
Q ss_pred CCCCeEEEeccccCccee
Q 025416 131 CPPPLHFNISHTSSLVAC 148 (253)
Q Consensus 131 ~~~~~~fSISHs~~~v~~ 148 (253)
+...+++||||++++++.
T Consensus 1855 g~~~i~lSISHd~~yA~A 1872 (1878)
T 2uv9_A 1855 GVKTVNVSISHGDLQAVA 1872 (1878)
T ss_dssp ------------------
T ss_pred CCCeEEEEEecCCCeEEE
Confidence 124679999999999653
No 32
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A*
Probab=96.65 E-value=0.0076 Score=53.83 Aligned_cols=89 Identities=7% Similarity=0.090 Sum_probs=64.4
Q ss_pred HHhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhchhcCC--CCCCcceEeeC----CCCCceEec---CCCCCC
Q 025416 60 QYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ--VNPRSLKFKKT----IYGKPEVDW---ENGDKW 130 (253)
Q Consensus 60 ~~~~~Ls~~E~~r~~r~~~~~~r~~~l~~R~llr~~L~~~~~~~~--~~p~~i~~~~~----~~GkP~l~~---~~~~~~ 130 (253)
.+.+++++.|++.+.....+..+.+++..++.+|+++.+. .|.| .++.+++|..+ +.|+|+... -.+.
T Consensus 157 ~~~r~ft~~E~~~l~~~~~~~~~~~~f~~~WtaKEA~~KA-~G~Gl~~~l~~iev~~~p~~~~~g~p~~~~~v~l~g~-- 233 (323)
T 2c43_A 157 IMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKA-IGVGLGFELQRLEFDLSPLNLDIGQVYKETRLFLDGE-- 233 (323)
T ss_dssp HTGGGSCHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHH-HTCCSCCCGGGEEEECCSSCCCTTCCBCCCEEEETTE--
T ss_pred HHHHhCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHh-cCCCCCCCCCeEEEEeCccccccCCceecceeeecCC--
Confidence 3457999999999987766667889999999999999887 4444 45678899888 689997421 0000
Q ss_pred CCCCeEE-EeccccCcce-eEEe
Q 025416 131 CPPPLHF-NISHTSSLVA-CGVT 151 (253)
Q Consensus 131 ~~~~~~f-SISHs~~~v~-~avs 151 (253)
....+.| +++|.++|++ +|+.
T Consensus 234 ~~~~w~~~~~~~~~~y~~Ava~~ 256 (323)
T 2c43_A 234 EEKEWAFEESKIDEHHFVAVALR 256 (323)
T ss_dssp ECTTEEEEEEEEETTEEEEEEEE
T ss_pred CCCCeEEEEEecCCCcEEEEEEE
Confidence 1246788 7899999954 4443
No 33
>2z0r_A Putative uncharacterized protein TTHA0547; alpha/beta protein, structural genomics, unknown function; 2.30A {Thermus thermophilus}
Probab=69.55 E-value=1.3 Score=32.48 Aligned_cols=27 Identities=30% Similarity=0.389 Sum_probs=20.3
Q ss_pred HHHHHHHHHhccC-CCCCCCCCCeEEEEecCCC
Q 025416 203 LWTLKEAYVKAVG-RGFSAAPFNTFTIRARVVK 234 (253)
Q Consensus 203 ~Wt~KEA~~Ka~G-~GL~~~~l~~~~v~~~~~~ 234 (253)
-|++||+++|++| .|. +.+-|+..|+.
T Consensus 58 ~w~lKE~~l~Al~~lgv-----~~~lvDy~Pg~ 85 (103)
T 2z0r_A 58 SRALKEAYLRALGMLQV-----EAVMVDYRPGT 85 (103)
T ss_dssp SHHHHHHHHHHHHHTTC-----CEEEESCCSSC
T ss_pred hhHHHHHHHHHHHHcCC-----cEEEEecCCCc
Confidence 4999999999987 354 55666666665
No 34
>1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A
Probab=35.78 E-value=6.9 Score=34.88 Aligned_cols=32 Identities=28% Similarity=0.269 Sum_probs=27.0
Q ss_pred CCeEEEeccccCcceeEEecccCCccchHHHHH
Q 025416 133 PPLHFNISHTSSLVACGVTVNVPIGIDVEEKQR 165 (253)
Q Consensus 133 ~~~~fSISHs~~~v~~avs~~~~VGIDIE~~~~ 165 (253)
..+.++++|.++.+.+.|+ +...|||-|.+.+
T Consensus 138 g~I~i~~~~~~~~v~i~V~-D~G~Gi~~~~~~~ 169 (379)
T 1b3q_A 138 GTLILSARHEGNNVVIEVE-DDGRGIDKEKIIR 169 (379)
T ss_dssp EEEEEEEEEETTEEEEEEE-ECSCCCCHHHHHH
T ss_pred cEEEEEEEEeCCEEEEEEE-ECCCCCCHHHHHH
Confidence 3678899999999999998 6788999998754
No 35
>2wpv_B Ubiquitin-like protein MDY2; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_B
Probab=32.32 E-value=12 Score=24.21 Aligned_cols=14 Identities=50% Similarity=0.655 Sum_probs=11.2
Q ss_pred chhhhhhhHhhhhh
Q 025416 3 SFVSKRLSLMMMTK 16 (253)
Q Consensus 3 ~~~~~~~~~~~~~~ 16 (253)
.|||||||+-+...
T Consensus 11 EFvsKFLtLatl~e 24 (59)
T 2wpv_B 11 EFVSKFLTLATLTE 24 (59)
T ss_dssp HHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHhcC
Confidence 59999999976554
No 36
>2dbh_A Tumor necrosis factor receptor superfamily member 21; apoptosis, TNF receptor superfamily, NF-kappab, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.91 E-value=78 Score=21.92 Aligned_cols=36 Identities=17% Similarity=0.424 Sum_probs=28.4
Q ss_pred HHHHHHhcCCHHHHHHHhcCCChhHHHHHHHHHHHHH
Q 025416 171 ILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLK 207 (253)
Q Consensus 171 ~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~K 207 (253)
+..+. .+++|+|...+...+..+++..+++.+-..|
T Consensus 41 fd~ml-h~lnpee~~vi~eipqaedkldrlfeii~~~ 76 (102)
T 2dbh_A 41 FDDML-HFLNPEELRVIEEIPQAEDKLDRLFEIIGVK 76 (102)
T ss_dssp HHHHH-HHSCHHHHHHHHTCCSHHHHHHHHHHHHHHH
T ss_pred hHHHH-hhcCHHHHhhhhhcchhhhhhHHHhhhhccc
Confidence 33444 6999999999999998777888887776655
Done!