Query 025417
Match_columns 253
No_of_seqs 169 out of 1570
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 09:51:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025417.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025417hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qr0_A 4'-phosphopantetheinyl 100.0 3.3E-38 1.1E-42 272.5 19.2 194 42-252 1-206 (228)
2 2c43_A Aminoadipate-semialdehy 100.0 7.4E-36 2.5E-40 270.1 18.2 206 41-252 25-255 (323)
3 3f09_A Holo-[acyl-carrier-prot 99.7 1.9E-18 6.4E-23 138.6 6.6 112 134-252 13-137 (143)
4 1fth_A ACPS, acyl carrier prot 99.7 7.8E-17 2.7E-21 125.6 8.0 97 154-252 5-115 (122)
5 3hyk_A Holo-[acyl-carrier-prot 99.6 7.2E-16 2.5E-20 120.4 8.7 96 155-252 7-116 (122)
6 3h88_A Holo-[acyl-carrier-prot 99.6 1.4E-15 4.8E-20 119.9 10.2 94 155-252 7-125 (129)
7 2was_A 3-oxoacyl-[acyl-carrier 99.6 5.3E-16 1.8E-20 121.0 7.6 95 154-252 2-118 (122)
8 1f7l_A Holo-(acyl carrier prot 99.6 1.4E-15 4.7E-20 118.1 8.1 95 155-252 4-115 (121)
9 3gwm_A Holo-[acyl-carrier-prot 99.5 1.8E-14 6.3E-19 113.4 7.9 94 155-252 4-125 (129)
10 2bdd_A ACP-synthase; structura 99.5 2.4E-14 8.2E-19 118.9 7.3 97 154-251 25-160 (182)
11 2qg8_A Acyl carrier protein sy 99.5 3E-14 1E-18 116.5 6.5 97 154-251 6-141 (163)
12 2wds_A Holo-[acyl-carrier-prot 99.5 2.2E-14 7.7E-19 114.9 4.1 93 155-252 25-140 (143)
13 3ota_A Holo-[acyl-carrier-prot 99.5 3.1E-13 1E-17 106.3 10.0 95 155-252 7-125 (129)
14 3nfd_A Phosphopantetheine prot 99.4 7.3E-14 2.5E-18 113.0 4.4 96 155-252 9-148 (153)
15 1f7l_A Holo-(acyl carrier prot 99.3 1.1E-11 3.8E-16 95.8 7.7 86 61-151 26-115 (121)
16 3f09_A Holo-[acyl-carrier-prot 99.2 2.7E-11 9.3E-16 96.8 8.5 83 61-150 50-136 (143)
17 3hyk_A Holo-[acyl-carrier-prot 99.1 5.7E-10 2E-14 86.7 9.3 83 61-150 29-115 (122)
18 1fth_A ACPS, acyl carrier prot 99.0 2.6E-09 8.7E-14 82.7 9.6 83 62-150 29-114 (122)
19 3ota_A Holo-[acyl-carrier-prot 99.0 1.6E-09 5.4E-14 85.0 8.0 86 61-150 30-124 (129)
20 3gwm_A Holo-[acyl-carrier-prot 99.0 1.8E-09 6.2E-14 84.7 8.1 85 63-150 28-124 (129)
21 3h88_A Holo-[acyl-carrier-prot 98.9 3.5E-09 1.2E-13 83.1 7.5 86 61-150 30-124 (129)
22 2was_A 3-oxoacyl-[acyl-carrier 98.8 1.9E-08 6.4E-13 77.9 8.7 86 61-150 22-117 (122)
23 2qg8_A Acyl carrier protein sy 98.8 1.3E-08 4.5E-13 82.9 7.8 89 61-150 29-141 (163)
24 2bdd_A ACP-synthase; structura 98.7 1.5E-08 5.2E-13 83.9 7.0 89 61-150 48-160 (182)
25 3nfd_A Phosphopantetheine prot 98.7 1.7E-08 5.9E-13 81.4 6.4 89 62-150 32-147 (153)
26 2wds_A Holo-[acyl-carrier-prot 98.7 4.6E-09 1.6E-13 83.8 3.0 87 61-150 47-139 (143)
27 2uv9_A Fatty acid synthase alp 98.7 1.7E-09 6E-14 114.8 0.0 96 153-252 1758-1875(1878)
28 2uv8_A Fatty acid synthase sub 98.5 1.7E-08 6E-13 107.4 0.0 96 153-252 1766-1883(1887)
29 1qr0_A 4'-phosphopantetheinyl 97.8 0.00013 4.5E-09 62.0 11.1 87 59-151 117-206 (228)
30 2uv8_A Fatty acid synthase sub 97.6 1E-05 3.6E-10 86.4 0.0 84 61-148 1787-1880(1887)
31 2uv9_A Fatty acid synthase alp 97.5 1.5E-05 5.2E-10 85.0 0.0 84 61-148 1779-1872(1878)
32 2c43_A Aminoadipate-semialdehy 96.9 0.0055 1.9E-07 54.7 10.1 91 60-151 157-255 (323)
33 2z0r_A Putative uncharacterize 65.9 1.6 5.5E-05 32.0 0.6 27 203-234 58-85 (103)
34 1b3q_A Protein (chemotaxis pro 48.8 2 6.8E-05 38.5 -1.8 76 133-218 138-213 (379)
35 2wpv_B Ubiquitin-like protein 32.2 13 0.00045 24.0 0.7 12 3-14 11-22 (59)
36 2dbh_A Tumor necrosis factor r 28.0 84 0.0029 21.7 4.2 32 176-207 45-76 (102)
37 3kat_A Nacht, LRR and PYD doma 21.3 76 0.0026 23.1 3.2 42 173-214 42-88 (107)
No 1
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1
Probab=100.00 E-value=3.3e-38 Score=272.54 Aligned_cols=194 Identities=27% Similarity=0.435 Sum_probs=168.9
Q ss_pred EEEEEEeCCCCCChhhHHHHhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCCceeEeeCCCCCce
Q 025417 42 THFWYVLPDEVKSESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGKPE 121 (253)
Q Consensus 42 v~lw~~~~~~~~~~~~~~~~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~g~~p~~i~i~~~~~GkP~ 121 (253)
+++|.++.+...++..++.+.++|+++|++++.+|+++++|.+|++||.++|++++++ +|++|.+++|.++++|||+
T Consensus 1 ~~v~~~~~~~~~~~~~~~~~~~~Ls~~E~~~~~~~~~~~~r~~~la~R~~~r~al~~~---lg~~~~~i~i~~~~~GkP~ 77 (228)
T 1qr0_A 1 MKIYGIYMDRPLSQEENERFMTFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQ---YQLDKSDIRFSTQEYGKPC 77 (228)
T ss_dssp CEEEEEECSSCCCHHHHHHHHTTSCHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHH---TTCCGGGCCCEECTTSCEE
T ss_pred CEEEEEECCCcCCHHHHHHHHhhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH---hCcCHHHcEEeeCcCCCce
Confidence 4699999876445556778889999999999999999999999999999999999998 7999999999999999999
Q ss_pred eecCCCCCCCCCCeEEEEcccccceeEEEccccccccchhHHHHhhhhhHHHHHHhcCCHHHHHHHhcCCCchHHHHHHH
Q 025417 122 VDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELI 201 (253)
Q Consensus 122 l~~~~~~~~~~~~~~fSISHs~~~v~~a~s~~~~VGVDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~ 201 (253)
+.. .++++||||||+++++|+++ ..+||||||.+.+. + ..+++++||++|++++...+. +.+...|+
T Consensus 78 l~~-------~~~~~~SiSHs~~~a~~a~~-~~~vGiDie~i~~~---~-~~~~~~~~t~~E~~~l~~~~~-~~~~~~~~ 144 (228)
T 1qr0_A 78 IPD-------LPDAHFNISHSGRWVIGAFD-SQPIGIDIEKTKPI---S-LEIAKRFFSKTEYSDLLAKDK-DEQTDYFY 144 (228)
T ss_dssp CTT-------CTTCEEEEEEETTEEEEEEE-SSCCEEEEEECCCC---C-HHHHSSSSCHHHHHHHHHSCH-HHHHHHHH
T ss_pred EeC-------CCCceEEecccCCeEEEEEC-CCCEEEEeEECCCC---c-HHHHHHhCCHHHHHHHHhCCh-hhHHHHHH
Confidence 984 35799999999999999998 69999999998763 2 388999999999999998763 45678999
Q ss_pred HHHHHHHHHHhccCCCCCCCCCceEEEEecCCCc-----------cc-EEeecCCCeEEEEee
Q 025417 202 KLWTLKEAYVKAVGRGFSAAPFNTFTIRARVVKM-----------GG-FHHFDTQHSEVKLVF 252 (253)
Q Consensus 202 ~~Wt~KEA~~Ka~G~GL~~~~l~~~~i~~~~~~~-----------~~-~~~~~~~~~~~~~~~ 252 (253)
.+||+|||++|++|+||. .++++++|..++.+. .. .+.+++++|.++++.
T Consensus 145 ~~wt~KEA~~Ka~G~gl~-~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~s~~~~~~y~~Av~~ 206 (228)
T 1qr0_A 145 HLWSMKESFIKQEGKGLS-LPLDSFSVRLHQDGQVSIELPDSHSPCYIKTYEVDPGYKMAVCA 206 (228)
T ss_dssp HHHHHHHHHHHHHCSTTS-CCSSCCEEEECGGGCEEEECSCTTSCCEEEEECSCTTEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCC-CCCceEEEeeCCCCCeEEecCCCCCCeEEEEEecCCCEEEEEEE
Confidence 999999999999999998 799999998775432 11 378889999988864
No 2
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A*
Probab=100.00 E-value=7.4e-36 Score=270.07 Aligned_cols=206 Identities=20% Similarity=0.288 Sum_probs=169.1
Q ss_pred eEEEEEEeCCCCC-ChhhHHHHhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCCceeEeeCCCCC
Q 025417 41 ETHFWYVLPDEVK-SESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGK 119 (253)
Q Consensus 41 ~v~lw~~~~~~~~-~~~~~~~~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~g~~p~~i~i~~~~~Gk 119 (253)
...-|.++...|. ....+..+.+.|+++|++++.+|+.+++|.+|++||+++|.+|+++ +|++|.+++|.++++||
T Consensus 25 ~~~rw~~~~~~W~~~~~~~~~~~~~Ls~~E~~r~~r~~~~~~r~~~LagR~l~r~al~~~---lg~~~~~i~i~~~~~GK 101 (323)
T 2c43_A 25 EGVRWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEK---LNIPWNHIRLQRTAKGK 101 (323)
T ss_dssp CCEEEEECGGGCCCCHHHHHHHHHTSCHHHHHHHHTCSBHHHHHHHHHHHHHHHHHHHHH---SCCCGGGCCEEECTTSC
T ss_pred CceEEEEEcCCCCCCHHHHHHHHccCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH---HCcCHHHeeEeeCCCCC
Confidence 4668899887774 3344455678999999999999999999999999999999999998 79999999999999999
Q ss_pred ceeecCCCCCCCCCCeEEEEcccccceeEEEccccccccchhHHHHh---hhhhHHHHHHhcCCHHHHHHHhcCCCchHH
Q 025417 120 PEVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRR---LKNKILAFAKRYFSPDEVKLLTAISDPEIQ 196 (253)
Q Consensus 120 P~l~~~~~~~~~~~~~~fSISHs~~~v~~a~s~~~~VGVDIE~~~~~---~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~ 196 (253)
|++..+.. ...++++||||||+++++|+++...+||||||.+.+. ...++..+++++||+.|++++...+.+..+
T Consensus 102 P~l~~~~~--~~~~~~~fSISHs~~~av~avs~~~~VGIDIE~i~~~~~~~~~~~~~~~~r~ft~~E~~~l~~~~~~~~~ 179 (323)
T 2c43_A 102 PVLAKDSS--NPYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQ 179 (323)
T ss_dssp EEECCC----CCSSSCEEEEEEETTEEEEEEESSSEEEEEEEECCCCSSSCHHHHHHHTGGGSCHHHHHHHTTSSSHHHH
T ss_pred ceeeCCcc--CCCCCceEEEEEeCCceeeeecCCCCceeeeEEeechhhhhhhhHHHHHHHhCCHHHHHHHHcCCChhHH
Confidence 99985321 0135799999999999999998668999999998652 112456889999999999999987754456
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCceEEEEecCC----Cc----------------ccE-EeecCCCeEEEEee
Q 025417 197 RQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIRARVV----KM----------------GGF-HHFDTQHSEVKLVF 252 (253)
Q Consensus 197 ~~~f~~~Wt~KEA~~Ka~G~GL~~~~l~~~~i~~~~~----~~----------------~~~-~~~~~~~~~~~~~~ 252 (253)
...|+++||+||||+||+|+||. .+|++++|..++. +. -.+ +++++++|.++++.
T Consensus 180 ~~~f~~~WtaKEA~~KA~G~Gl~-~~l~~iev~~~p~~~~~g~p~~~~~v~l~g~~~~~w~~~~~~~~~~y~~Ava~ 255 (323)
T 2c43_A 180 LDMFYRNWALKESFIKAIGVGLG-FELQRLEFDLSPLNLDIGQVYKETRLFLDGEEEKEWAFEESKIDEHHFVAVAL 255 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSC-CCGGGEEEECCSSCCCTTCCBCCCEEEETTEECTTEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCC-CCCCeEEEEeCccccccCCceecceeeecCCCCCCeEEEEEecCCCcEEEEEE
Confidence 78999999999999999999997 7999999997731 11 112 45678889888764
No 3
>3f09_A Holo-[acyl-carrier-protein] synthase; structural genomics, I deseases, fatty acid biosynthesis, lipid synthesis; 1.82A {Staphylococcus aureus subsp} PDB: 4dxe_A
Probab=99.74 E-value=1.9e-18 Score=138.65 Aligned_cols=112 Identities=21% Similarity=0.280 Sum_probs=86.6
Q ss_pred CeEEEEcccccceeEEEccccccccchhHHHHhhhh---hHHHHHHhcCCHHHHHHHhcCCCchHHHHHHHHHHHHHHHH
Q 025417 134 PLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKN---KILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAY 210 (253)
Q Consensus 134 ~~~fSISHs~~~v~~a~s~~~~VGVDIE~~~~~~~~---~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~ 210 (253)
--.||+||++++.+++ |||||+.+.+ ... ....+++++||++|++.+...+.+.++.+.|+..|++|||+
T Consensus 13 ~~~~n~s~~~~~mI~g------IGiDIv~i~R-i~~~~~r~~~f~~rift~~E~~~~~~~~~~~~~~~~lA~RwAaKEA~ 85 (143)
T 3f09_A 13 LGTENLYFQSNAMIHG------IGVDLIEIDR-IQALYSKQPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAF 85 (143)
T ss_dssp TTCCCHHHHCCCSEEE------EEEEEEEHHH-HHHHHHTCGGGHHHHSCHHHHHHHHTCSSHHHHHHHHHHHHHHHHHH
T ss_pred cceeeccccCCCEEEE------EEEEEEEehH-HHHHHhhhHHHHHHhCCHHHHHHhhccCchhhHHHHHHHHHHHHHHH
Confidence 3469999999997654 8999999876 221 11368999999999999998875555678899999999999
Q ss_pred HhccCCCCCC-CCCceEEEEecCCC---------cccEEeecCCCeEEEEee
Q 025417 211 VKAVGRGFSA-APFNTFTIRARVVK---------MGGFHHFDTQHSEVKLVF 252 (253)
Q Consensus 211 ~Ka~G~GL~~-~~l~~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~ 252 (253)
+||+|+|+.. .++++++|..++.+ ...+|++|+++|+|++++
T Consensus 86 ~KAlG~G~~~~~~~~dIeI~~d~~GkP~l~l~g~~~~vSISH~~~yAvA~vv 137 (143)
T 3f09_A 86 SKALGTGLGKHVAFNDIDCYNDELGKPKIDYEGFIVHVSISHTEHYAMSQVV 137 (143)
T ss_dssp HHHHC------CCGGGCCEEEC--CCEEECCTTEEEEEEEEECSSEEEEEEE
T ss_pred HHHhccCcccCcCcceEEEEECCCCCeEEEEcCCcEEEEEECCCCEEEEEEE
Confidence 9999999862 57999999877643 347899999999999875
No 4
>1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A*
Probab=99.68 E-value=7.8e-17 Score=125.56 Aligned_cols=97 Identities=27% Similarity=0.292 Sum_probs=79.1
Q ss_pred cccccchhHHHHhhhhh---HHHHHHhcCCHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhccCCCCCCCCCceEEEEe
Q 025417 154 VPIGIDVEEKQRRLKNK---ILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIRA 230 (253)
Q Consensus 154 ~~VGVDIE~~~~~~~~~---~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~~~~l~~~~i~~ 230 (253)
..||||||.+.+. ... ...+++++||++|++.+.+.+ +.++.+.|+..||+|||++||+|+|+...+++++.|..
T Consensus 5 ~~iGvDie~i~r~-~~~~~~~~~~~~r~~t~~E~~~~~~~~-~~~~~~~~a~rwaaKEA~~KalG~gl~~~~~~~i~i~~ 82 (122)
T 1fth_A 5 VGHGIDIEELASI-ESAVTRHEGFAKRVLTALEMERFTSLK-GRRQIEYLAGRWSAKEAFSKAMGTGISKLGFQDLEVLN 82 (122)
T ss_dssp EEEEEEEEEHHHH-HHHHHTTSSHHHHHSCHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHTSCSSSSCGGGCEEEE
T ss_pred cceeEEEEEcchH-HHHHHhhHHHHHHcCCHHHHHHHHcCC-cchHHHHHHHHHHHHHHHHHHhCCCccccccceEEEec
Confidence 3689999998762 211 146889999999999999876 34577899999999999999999999745899999987
Q ss_pred cCCC-----------cccEEeecCCCeEEEEee
Q 025417 231 RVVK-----------MGGFHHFDTQHSEVKLVF 252 (253)
Q Consensus 231 ~~~~-----------~~~~~~~~~~~~~~~~~~ 252 (253)
++.+ ...+|++|+++|++++++
T Consensus 83 ~~~g~P~l~~~~~~~~~~~Sish~~~ya~A~vv 115 (122)
T 1fth_A 83 NERGAPYFSQAPFSGKIWLSISHTDQFVTASVI 115 (122)
T ss_dssp CTTSCEEEEECSCCSEEEEEEEECSSEEEEEEE
T ss_pred CCCCCeEEEecCCCCeEEEEEECCCCCEEEEEE
Confidence 7543 236899999999999875
No 5
>3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} SCOP: d.150.1.0
Probab=99.63 E-value=7.2e-16 Score=120.37 Aligned_cols=96 Identities=24% Similarity=0.330 Sum_probs=78.2
Q ss_pred ccccchhHHHHhhhh---hHHHHHHhcCCHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhccCCCCC-CCCCceEEEEe
Q 025417 155 PIGIDVEEKQRRLKN---KILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS-AAPFNTFTIRA 230 (253)
Q Consensus 155 ~VGVDIE~~~~~~~~---~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~-~~~l~~~~i~~ 230 (253)
.|||||+.+.+ ... ....+++++||++|++.+...+. ..+.+.|+..|++|||++||+|+|+. ..+|++++|..
T Consensus 7 giGiDiv~i~r-i~~~~~~~~~f~~r~ft~~E~~~~~~~~~-~~~~~~la~rwaaKEA~~KAlg~G~~~~~~~~dieI~~ 84 (122)
T 3hyk_A 7 GIGIDIIELNR-IEKMLDGKLKFMERILTENERNVAKGLKG-SRLTEFVAGRFAAKEAYSKAVGTGIGKEVSFLDIEVRN 84 (122)
T ss_dssp EEEEEEEEHHH-HHHHHC---CHHHHHSCHHHHHHHTTCCT-HHHHHHHHHHHHHHHHHHHHHTSCSSSSCCGGGCEEEE
T ss_pred EEEEEEEEchH-HHHHHHhhhhHHHHcCCHHHHHHHHhCCc-chHHHHHHHHHHHHHHHHHHhccCccCCcCceEEEEEE
Confidence 58999999876 221 12468999999999999988763 45678999999999999999999996 36899999988
Q ss_pred cCCC----------cccEEeecCCCeEEEEee
Q 025417 231 RVVK----------MGGFHHFDTQHSEVKLVF 252 (253)
Q Consensus 231 ~~~~----------~~~~~~~~~~~~~~~~~~ 252 (253)
++.+ ...+|++|+++|++++++
T Consensus 85 ~~~G~P~v~l~~~~~~~vSISH~~~~A~A~vv 116 (122)
T 3hyk_A 85 DDRGKPILITSTEHIVHLSISHSKEFAVAQVV 116 (122)
T ss_dssp CTTSCEEEECSCSSEEEEEEEECSSEEEEEEE
T ss_pred CCCCCeEEEEcCCCCEEEEEECCCCEEEEEEE
Confidence 7644 246899999999999875
No 6
>3h88_A Holo-[acyl-carrier-protein] synthase; alpha-beta structure, structural genomics of infectious diseases, cytoplasm, fatty acid biosynthesis; HET: COA; 1.85A {Vibrio cholerae} PDB: 3ota_A* 3qmn_A*
Probab=99.63 E-value=1.4e-15 Score=119.88 Aligned_cols=94 Identities=28% Similarity=0.361 Sum_probs=77.9
Q ss_pred ccccchhHHHHhhhh----hHHHHHHhcCCHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhccCCCCC-CCCCceEEEE
Q 025417 155 PIGIDVEEKQRRLKN----KILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS-AAPFNTFTIR 229 (253)
Q Consensus 155 ~VGVDIE~~~~~~~~----~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~-~~~l~~~~i~ 229 (253)
.|||||+.+.+- .. ....+++++||++|++.+...+. +.+.|+..|++|||++||+|+|+. ..++++++|.
T Consensus 7 GiGiDIv~i~ri-~~~~~r~~~~f~~r~ft~~E~~~~~~~~~---~~~~la~rwaaKEA~~KAlg~g~~~~~~~~dieI~ 82 (129)
T 3h88_A 7 GLGTDIAEIERV-EKALARSGENFARRILTDSELEQFHASKQ---QGRFLAKRFAAKEAASKALGTGIAQGVTFHDFTIS 82 (129)
T ss_dssp EEEEEEEEHHHH-HHHHHHHHHHHHHHHSCHHHHHHHHHCSC---HHHHHHHHHHHHHHHHHHTTSCSCTTCCGGGEEEE
T ss_pred EEEEEEEEcHHH-HHHHHhhhHHHHHHhCCHHHHHHHhcCch---HHHHHHHHHHHHHHHHHHhccCccCCccceEEEEE
Confidence 589999998862 21 12578999999999999998763 567899999999999999999995 4689999998
Q ss_pred ecCCC--------------------cccEEeecCCCeEEEEee
Q 025417 230 ARVVK--------------------MGGFHHFDTQHSEVKLVF 252 (253)
Q Consensus 230 ~~~~~--------------------~~~~~~~~~~~~~~~~~~ 252 (253)
.++.+ ...||++|+++|+|++++
T Consensus 83 ~~~~G~P~~~l~g~~~~~~~~~g~~~~~vSISH~~~~A~A~vi 125 (129)
T 3h88_A 83 HDKLGKPLLILSGQAAELASQLQVENIHLSISDERHYAMATVI 125 (129)
T ss_dssp ECTTSCEEEEECHHHHHHHHHTTCCEEEEEEEECSSEEEEEEE
T ss_pred ECCCCCEEEEECHHHHHHHHHcCCCEEEEEEECCCCeEEEEEE
Confidence 87654 236899999999999875
No 7
>2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B
Probab=99.63 E-value=5.3e-16 Score=120.97 Aligned_cols=95 Identities=20% Similarity=0.272 Sum_probs=74.2
Q ss_pred cccccchhHHHHhhhhhHHHHHHhcCCHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhccCCC-CC-CCCCceEEEEec
Q 025417 154 VPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRG-FS-AAPFNTFTIRAR 231 (253)
Q Consensus 154 ~~VGVDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~G-L~-~~~l~~~~i~~~ 231 (253)
..||||||.+.+ .......+++++||++|++++...+. +...|+..|++|||++||+|+| +. ..+|++++|..+
T Consensus 2 ~~iGiDI~~i~r-~~~~~~~~~~r~ft~~E~~~~~~~~~---~~~~la~rwaaKEA~~KAlg~g~~~~~~~~~~iei~~~ 77 (122)
T 2was_A 2 GGVGVDVELITS-INVENDTFIERNFTPQEIEYCSAQPS---VQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRV 77 (122)
T ss_dssp CCEEEEEEEGGG-CCSSCHHHHHHHSCHHHHHHHHTSSS---HHHHHHHHHHHHHHHHHHHCC-------CCTTEEEEEE
T ss_pred CCeeEEEEEcch-hhhhhHHHHHHcCCHHHHHHHHcCCc---HHHHHHHHHHHHHHHHHHhCCCccCCCCCCCEEEEEEC
Confidence 579999999976 22123578999999999999988653 4678999999999999999996 43 268999999876
Q ss_pred CCC--------------------cccEEeecCCCeEEEEee
Q 025417 232 VVK--------------------MGGFHHFDTQHSEVKLVF 252 (253)
Q Consensus 232 ~~~--------------------~~~~~~~~~~~~~~~~~~ 252 (253)
+.+ ...+|++|+++|+++++.
T Consensus 78 ~~G~P~l~l~g~~~~~~~~~~~~~~~vSiSH~~~~A~A~vi 118 (122)
T 2was_A 78 NKNAPAVELHGNAKKAAEEAGVTDVKVSISHDDLQAVAVAV 118 (122)
T ss_dssp TTEEEEEEECHHHHHHHHTTTCCEEEEEEEECSSEEEEEEE
T ss_pred CCCCeEEEEChHHHHHHHHcCCCeEEEEEEcCCCcEEEEEE
Confidence 543 235899999999999874
No 8
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A*
Probab=99.61 E-value=1.4e-15 Score=118.11 Aligned_cols=95 Identities=24% Similarity=0.310 Sum_probs=77.9
Q ss_pred ccccchhHHHHhhhhhH----HHHHHhcCCHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhccCCCCCC-CCCceEEEE
Q 025417 155 PIGIDVEEKQRRLKNKI----LAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSA-APFNTFTIR 229 (253)
Q Consensus 155 ~VGVDIE~~~~~~~~~~----~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~~-~~l~~~~i~ 229 (253)
.||||||.+.+. . +. ..+++++||++|++.+.+.+ +.++.+.|+..|++|||+.|++|+|+.. .+++++.|.
T Consensus 4 ~iGvDi~~i~r~-~-~~~~~~~~~~~r~~t~~E~~~~~~~~-~~~~~~~la~rwaaKEA~~Kalg~g~~~~~~~~~i~i~ 80 (121)
T 1f7l_A 4 GIGLDITELKRI-A-SMAGRQKRFAERILTRSELDQYYELS-EKRKNEFLAGRFAAKEAFSKAFGTGIGRQLSFQDIEIR 80 (121)
T ss_dssp EEEEEEEEHHHH-H-HHHHHCTTHHHHHCCHHHHHHHTTSC-HHHHHHHHHHHHHHHHHHHHHHTSCSBTTBCGGGCEEE
T ss_pred eEEEeEEEchHH-H-HHHHhhHHHHHHcCCHHHHHHHHccC-cccHHHHHHHHHHHHHHHHHHhCCCCCCCcceEEEEEE
Confidence 589999999762 2 22 46889999999999999876 3446667779999999999999999973 578999998
Q ss_pred ecCCCc------------ccEEeecCCCeEEEEee
Q 025417 230 ARVVKM------------GGFHHFDTQHSEVKLVF 252 (253)
Q Consensus 230 ~~~~~~------------~~~~~~~~~~~~~~~~~ 252 (253)
.++.+. ..+|++|+++++++++.
T Consensus 81 ~~~~G~P~l~~~~~~~~~~~~SiSH~~~~a~A~v~ 115 (121)
T 1f7l_A 81 KDQNGKPYIICTKLSPAAVHVSITHTKEYAAAQVV 115 (121)
T ss_dssp ECTTSCEEEEETTTEEEEEEEEEEECSSEEEEEEE
T ss_pred ECCCCCcEEEECccccCcEEEEEeCCCCcEEEEEE
Confidence 875542 35899999999999875
No 9
>3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* 4hc6_A
Probab=99.52 E-value=1.8e-14 Score=113.44 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=75.0
Q ss_pred ccccchhHHHHhhhhh----HHHHHHhcCCHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhccCCCCCC-------CCC
Q 025417 155 PIGIDVEEKQRRLKNK----ILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSA-------APF 223 (253)
Q Consensus 155 ~VGVDIE~~~~~~~~~----~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~~-------~~l 223 (253)
.|||||+.+.+- ..- -..++ ++||++|++.+...+ .++...|...|++|||++||+|+|+.+ .++
T Consensus 4 giGiDIv~i~ri-~~~~~r~~~~f~-r~ft~~E~~~~~~~~--~~~~~~la~rwAaKEA~~KAlg~g~~g~~~~~~~~~~ 79 (129)
T 3gwm_A 4 GVGIDLVSIPDF-AEQVDRPGTVFA-ETFTPGERRDAADKS--SSAARHLAARWAAKEAVIKAWSSSRFSKRPALPEGIH 79 (129)
T ss_dssp EEEEEEEEHHHH-HHHHTSCCHHHH-TTSCHHHHHHHTSTT--SHHHHHHHHHHHHHHHHHHHHHTSTTCCSSSCCTTHH
T ss_pred EEEEEEEEchHH-HHHHhhchhHHH-hhCCHHHHHHHHhCc--hhHHHHHHHHHHHHHHHHHHhccCccccccccCccce
Confidence 489999998762 211 14678 999999999998743 346788999999999999999999853 348
Q ss_pred ceEEEEecCCC-----------------cccEEeecCCCeEEEEee
Q 025417 224 NTFTIRARVVK-----------------MGGFHHFDTQHSEVKLVF 252 (253)
Q Consensus 224 ~~~~i~~~~~~-----------------~~~~~~~~~~~~~~~~~~ 252 (253)
++++|..++.+ ...||++|+++|++++++
T Consensus 80 ~dIeI~~~~~G~P~v~l~g~~~~~~~~~~~~vSISH~~~~A~A~vi 125 (129)
T 3gwm_A 80 RDIEVVTDMWGRPKVRLSGEIAKHLEDVTIHVSLTHEDQTAAAVAI 125 (129)
T ss_dssp HHEEEEECTTSCEEEEECHHHHHHTTTCEEEEEEEEETTEEEEEEE
T ss_pred eEEEEEECCCCCeEEEECHHHHHhcCCCcEEEEEeCCCCEEEEEEE
Confidence 99999887654 236899999999999875
No 10
>2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii}
Probab=99.50 E-value=2.4e-14 Score=118.89 Aligned_cols=97 Identities=21% Similarity=0.224 Sum_probs=65.5
Q ss_pred cccccchhHHHHhhhhh---HHHHHHhcCCHHHHHHHhcCCCc-----------hHHHHHHHHHHHHHHHHHhccCCCCC
Q 025417 154 VPIGIDVEEKQRRLKNK---ILAFAKRYFSPDEVKLLTAISDP-----------EIQRQELIKLWTLKEAYVKAVGRGFS 219 (253)
Q Consensus 154 ~~VGVDIE~~~~~~~~~---~~~l~~~~fs~~E~~~l~~~~~~-----------~~~~~~f~~~Wt~KEA~~Ka~G~GL~ 219 (253)
..|||||+.+.+ +..- ...+++++||+.|++.+...+.. .++.+.|...|++|||++||+|+|+.
T Consensus 25 ~gIGvDIv~I~R-i~~~l~r~~rf~~RifT~~E~~~~~~~~~~~~~~~~~~~~~~~~a~~lAgRfAAKEAv~KAlGtGi~ 103 (182)
T 2bdd_A 25 IGIGTDILCVNR-IYKILEKNINFIKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSMGRGLS 103 (182)
T ss_dssp EEEEEEEEEHHH-HHHHHHHCTTHHHHHSCHHHHHHHHTC-----------CHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred eceEEEEEEehh-HHHHHhccHHHHHhhCCHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 478999999876 2211 13688999999999999886532 12345667999999999999999996
Q ss_pred -----CCCCceEEEEecCCC--------------------cccEEeecCCCeEEEEe
Q 025417 220 -----AAPFNTFTIRARVVK--------------------MGGFHHFDTQHSEVKLV 251 (253)
Q Consensus 220 -----~~~l~~~~i~~~~~~--------------------~~~~~~~~~~~~~~~~~ 251 (253)
+.+|++++|..++.+ ...||++||++|+|+++
T Consensus 104 ~~~~~g~~~~dIEI~~d~~GkP~v~L~g~a~~~~~~~gi~~i~lSISHd~~yavA~V 160 (182)
T 2bdd_A 104 SISKYGLSMNDIEIKNDKYGKPHVYLYGKAKKVAYEMGIVKIFLSISDEKIINSQTN 160 (182)
T ss_dssp ------CCGGGEEEEECTTSCEEEEECHHHHHHHHHHTCCEEEEEEEEEC-------
T ss_pred ccccCCcCcCEEEEEECCCCCEEEEECHHHHHHHHHcCCCEEEEEEECCCCcEEEEE
Confidence 368999999877644 23689999999999986
No 11
>2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii}
Probab=99.49 E-value=3e-14 Score=116.49 Aligned_cols=97 Identities=21% Similarity=0.210 Sum_probs=69.2
Q ss_pred cccccchhHHHHhhhhh---HHHHHHhcCCHHHHHHHhcCCCch-----------HHHHHHHHHHHHHHHHHhccCCCCC
Q 025417 154 VPIGIDVEEKQRRLKNK---ILAFAKRYFSPDEVKLLTAISDPE-----------IQRQELIKLWTLKEAYVKAVGRGFS 219 (253)
Q Consensus 154 ~~VGVDIE~~~~~~~~~---~~~l~~~~fs~~E~~~l~~~~~~~-----------~~~~~f~~~Wt~KEA~~Ka~G~GL~ 219 (253)
..|||||+.+.+ ...- ...+++++||+.|++.+...+... .+.+.+...|++|||++||+|+|+.
T Consensus 6 ~gIGiDIv~I~R-i~~~l~r~~~f~~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~lAgRfAAKEA~~KAlGtGi~ 84 (163)
T 2qg8_A 6 IGIGTDILCVNR-IYKILEKNINFIKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSMGRGLS 84 (163)
T ss_dssp EEEEEEEEEHHH-HHHHHHHCGGGHHHHSCHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBC
T ss_pred CceEEeEEEehh-HHHHHhccHHHHHhcCCHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 368999999876 2211 136889999999999998876421 1245667999999999999999996
Q ss_pred -----CCCCceEEEEecCCC--------------------cccEEeecCCCeEEEEe
Q 025417 220 -----AAPFNTFTIRARVVK--------------------MGGFHHFDTQHSEVKLV 251 (253)
Q Consensus 220 -----~~~l~~~~i~~~~~~--------------------~~~~~~~~~~~~~~~~~ 251 (253)
+.++++++|..++.+ ...||++||++|+|+++
T Consensus 85 ~~~~~~~~~~dIeI~~d~~G~P~v~l~g~a~~~~~~~g~~~i~lSISHd~~~avA~v 141 (163)
T 2qg8_A 85 SISKYGLSMNDIEIKNDKYGKPHVYLYGKAKKVAYEMGIVKIFLSISDEKIINSQTN 141 (163)
T ss_dssp -----CBCGGGEEEEECTTSCEEEEECHHHHHHHHHTTCCEEEEEEEEEEC------
T ss_pred ccccCCccccEEEEEECCCCCEEEEEChHHHHHHHHcCCCEEEEEEECCCCcEEEEE
Confidence 367999999877644 23589999999999986
No 12
>2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A*
Probab=99.46 E-value=2.2e-14 Score=114.86 Aligned_cols=93 Identities=22% Similarity=0.172 Sum_probs=75.0
Q ss_pred ccccchhHHHHhhhhh---HHHHHHhcCCHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhccCCCCCCCCCceEEEEec
Q 025417 155 PIGIDVEEKQRRLKNK---ILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIRAR 231 (253)
Q Consensus 155 ~VGVDIE~~~~~~~~~---~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~~~~l~~~~i~~~ 231 (253)
.|||||+.+.+ .... ...+++++||+.|++.+.+.+. +.+.|+..|++|||++||+|+|.. .+|++++|..+
T Consensus 25 giGiDIv~i~r-i~~~~~r~~~f~~rift~~E~~~~~~~~~---~~~~lAgRfAAKEAv~KAlG~G~~-~~~~dieI~~~ 99 (143)
T 2wds_A 25 GVGIDVAEVER-FGAALERTPALAGRLFLESELLLPGGERR---GVASLAARFAAKEALAKALGAPAG-LLWTDAEVWVE 99 (143)
T ss_dssp EEEEEEEEHHH-HHHHHHHCTTHHHHHCCGGGGBCTTSSBC---CHHHHHHHHHHHHHHHHHTTCCTT-CCGGGEEEEEC
T ss_pred ceEEEEEEehh-HHHHHhhhHHHHHhcCCHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhCCCCC-CCceEEEEEeC
Confidence 68999999876 2211 1467899999999988876542 467899999999999999999965 78999999877
Q ss_pred CCC--------------------cccEEeecCCCeEEEEee
Q 025417 232 VVK--------------------MGGFHHFDTQHSEVKLVF 252 (253)
Q Consensus 232 ~~~--------------------~~~~~~~~~~~~~~~~~~ 252 (253)
+.+ ...+|++|+.+|++++++
T Consensus 100 ~~G~P~v~l~g~~~~~~~~~g~~~~~vSISH~~~~AvA~vi 140 (143)
T 2wds_A 100 AGGRPRLRVTGTVAARAAELGVASWHVSLSADAGIASAVVI 140 (143)
T ss_dssp TTSCEEEEECHHHHHHHHHHTCCEEEEEEEEETTEEEEEEE
T ss_pred CCCCcEEEEChHHHHHHHhcCCCeEEEEEECCCCcEEEEEE
Confidence 643 125899999999999874
No 13
>3ota_A Holo-[acyl-carrier-protein] synthase; structural genomics, center for structural genomics of infec diseases, csgid; HET: COA; 1.85A {Vibrio cholerae o1 biovar el tor} PDB: 3qmn_A*
Probab=99.46 E-value=3.1e-13 Score=106.31 Aligned_cols=95 Identities=28% Similarity=0.367 Sum_probs=75.7
Q ss_pred ccccchhHHHHh---hhhhHHHHHHhcCCHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhccCCCCC-CCCCceEEEEe
Q 025417 155 PIGIDVEEKQRR---LKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS-AAPFNTFTIRA 230 (253)
Q Consensus 155 ~VGVDIE~~~~~---~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~GL~-~~~l~~~~i~~ 230 (253)
.|||||..+.+- ....-..+++++||+.|++....... +...+...|++|||+.||+|+|+. +..|++++|..
T Consensus 7 GIG~Div~i~Ri~~~l~r~g~~F~~Rift~~E~~~~~~~~~---~~~~lA~RfAAKEA~~KAlGtg~~~~~~~~dIeI~~ 83 (129)
T 3ota_A 7 GLGTDIAEIERVEKALARSGENFARRILTDSELEQFHASKQ---QGRFLAKRFAAKEAASKALGTGIAQGVTFHDFTISH 83 (129)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHCSC---HHHHHHHHHHHHHHHHHHHTSCSCTTCCGGGEEEEE
T ss_pred EEeeEeeEHHHHHHHHHhhCHHHHHHCCCHHHHHHHHhccc---hHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEEE
Confidence 479999877651 11112568999999999999887654 456788899999999999999996 36799999998
Q ss_pred cCCCc--------------------ccEEeecCCCeEEEEee
Q 025417 231 RVVKM--------------------GGFHHFDTQHSEVKLVF 252 (253)
Q Consensus 231 ~~~~~--------------------~~~~~~~~~~~~~~~~~ 252 (253)
++.+. ..||++|+++|+|+++.
T Consensus 84 d~~GkP~v~l~g~~~~~~~~~~~~~i~lSiSh~~~~AiA~vI 125 (129)
T 3ota_A 84 DKLGKPLLILSGQAAELASQLQVENIHLSISDERHYAMATVI 125 (129)
T ss_dssp CTTCCEEEEECHHHHHHHHHTTCCEEEEEEEECSSEEEEEEE
T ss_pred CCCCCceEEeChHHHHHHHHcCCCeEEEEEeCCCCeEEEEEE
Confidence 87652 34799999999999874
No 14
>3nfd_A Phosphopantetheine protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A*
Probab=99.42 E-value=7.3e-14 Score=113.03 Aligned_cols=96 Identities=18% Similarity=0.260 Sum_probs=73.5
Q ss_pred ccccchhHHHHhhhhh----HHHHHHhcCCHHHHHHHhcCCCc----------hHHHHHHHHHHHHHHHHHhccCCCCC-
Q 025417 155 PIGIDVEEKQRRLKNK----ILAFAKRYFSPDEVKLLTAISDP----------EIQRQELIKLWTLKEAYVKAVGRGFS- 219 (253)
Q Consensus 155 ~VGVDIE~~~~~~~~~----~~~l~~~~fs~~E~~~l~~~~~~----------~~~~~~f~~~Wt~KEA~~Ka~G~GL~- 219 (253)
.|||||+.+.+ +..- -..+ +++||++|++.+...+.. .++.+.|...|++|||++||+|+|+.
T Consensus 9 GIGiDIv~I~R-i~~~l~r~g~~f-~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~lAgrfAAKEA~~KAlg~g~~g 86 (153)
T 3nfd_A 9 TVGVDLVHIPG-FAEQLSRPGSTF-EQVFSPLERRHAQTRRSAAADATNSSLAGSRTEHLAGRWAAKEAFIKAWSQAIYG 86 (153)
T ss_dssp EEEEEEEEHHH-HHHHHTSTTCGG-GGSSCHHHHHHHHCC------------CCTTHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEEEEeHH-HHHHHhhccHHH-HhhCCHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 58999999876 2211 1346 899999999999886531 12467889999999999999999873
Q ss_pred --------CCCCceEEEEecCCCc-----------------ccE----EeecCCCeEEEEee
Q 025417 220 --------AAPFNTFTIRARVVKM-----------------GGF----HHFDTQHSEVKLVF 252 (253)
Q Consensus 220 --------~~~l~~~~i~~~~~~~-----------------~~~----~~~~~~~~~~~~~~ 252 (253)
...+++++|..++.+. ..| |++|+++|+|++++
T Consensus 87 ~~~~~~~~~~~~~dIeI~~d~~G~P~v~l~g~~~~~~~~~~~~v~~~lSISHd~~~AvA~vi 148 (153)
T 3nfd_A 87 KPPVIEPDLVNFAEIEVLPDRWGRVALQLKGEVAAKLQESIGDVELALSISHDGDYATALCL 148 (153)
T ss_dssp SCCSSCGGGCCGGGEEEEECTTSCEEEEECHHHHHHHHHHHCSEEEEEEEEEETTEEEEEEE
T ss_pred ccccccccCCcceEEEEEECCCCCeEEEECHHHHHHcCCceEEECCceEecCCCCEEEEEEE
Confidence 3578999999876552 245 99999999999875
No 15
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A*
Probab=99.26 E-value=1.1e-11 Score=95.83 Aligned_cols=86 Identities=20% Similarity=0.335 Sum_probs=69.4
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcCC----CCCCceeEeeCCCCCceeecCCCCCCCCCCeE
Q 025417 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ----VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLH 136 (253)
Q Consensus 61 ~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~g----~~p~~i~i~~~~~GkP~l~~~~~~~~~~~~~~ 136 (253)
+.+.|+++|++++.++. ++++.+|+++|.++|+++.+.+ +.| +++.+++|.++++|+|++..... ....++
T Consensus 26 ~~r~~t~~E~~~~~~~~-~~~~~~~la~rwaaKEA~~Kal-g~g~~~~~~~~~i~i~~~~~G~P~l~~~~~---~~~~~~ 100 (121)
T 1f7l_A 26 AERILTRSELDQYYELS-EKRKNEFLAGRFAAKEAFSKAF-GTGIGRQLSFQDIEIRKDQNGKPYIICTKL---SPAAVH 100 (121)
T ss_dssp HHHHCCHHHHHHHTTSC-HHHHHHHHHHHHHHHHHHHHHH-TSCSBTTBCGGGCEEEECTTSCEEEEETTT---EEEEEE
T ss_pred HHHcCCHHHHHHHHccC-cccHHHHHHHHHHHHHHHHHHh-CCCCCCCcceEEEEEEECCCCCcEEEECcc---ccCcEE
Confidence 34789999999999886 6889999999999999998873 333 56789999999999999974210 013689
Q ss_pred EEEcccccceeEEEc
Q 025417 137 FNISHTSSLVACGVT 151 (253)
Q Consensus 137 fSISHs~~~v~~a~s 151 (253)
+||||+++|+++++.
T Consensus 101 ~SiSH~~~~a~A~v~ 115 (121)
T 1f7l_A 101 VSITHTKEYAAAQVV 115 (121)
T ss_dssp EEEEECSSEEEEEEE
T ss_pred EEEeCCCCcEEEEEE
Confidence 999999999876554
No 16
>3f09_A Holo-[acyl-carrier-protein] synthase; structural genomics, I deseases, fatty acid biosynthesis, lipid synthesis; 1.82A {Staphylococcus aureus subsp} PDB: 4dxe_A
Probab=99.22 E-value=2.7e-11 Score=96.83 Aligned_cols=83 Identities=22% Similarity=0.320 Sum_probs=67.1
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcCC----CCCCceeEeeCCCCCceeecCCCCCCCCCCeE
Q 025417 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ----VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLH 136 (253)
Q Consensus 61 ~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~g----~~p~~i~i~~~~~GkP~l~~~~~~~~~~~~~~ 136 (253)
+.+.|+++|++++.++...+++.+|+++|.++|+++.+.+ +.| +.+.+++|.+++.|||++...+ ..++
T Consensus 50 ~~rift~~E~~~~~~~~~~~~~~~~lA~RwAaKEA~~KAl-G~G~~~~~~~~dIeI~~d~~GkP~l~l~g------~~~~ 122 (143)
T 3f09_A 50 VERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKAL-GTGLGKHVAFNDIDCYNDELGKPKIDYEG------FIVH 122 (143)
T ss_dssp HHHHSCHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHH-C------CCGGGCCEEEC--CCEEECCTT------EEEE
T ss_pred HHHhCCHHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHh-ccCcccCcCcceEEEEECCCCCeEEEEcC------CcEE
Confidence 3478999999999998778899999999999999998873 333 5688999999999999998421 4789
Q ss_pred EEEcccccceeEEE
Q 025417 137 FNISHTSSLVACGV 150 (253)
Q Consensus 137 fSISHs~~~v~~a~ 150 (253)
+||||+++++++.+
T Consensus 123 vSISH~~~yAvA~v 136 (143)
T 3f09_A 123 VSISHTEHYAMSQV 136 (143)
T ss_dssp EEEEECSSEEEEEE
T ss_pred EEEECCCCEEEEEE
Confidence 99999999976554
No 17
>3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} SCOP: d.150.1.0
Probab=99.07 E-value=5.7e-10 Score=86.73 Aligned_cols=83 Identities=14% Similarity=0.193 Sum_probs=67.2
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcCC----CCCCceeEeeCCCCCceeecCCCCCCCCCCeE
Q 025417 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ----VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLH 136 (253)
Q Consensus 61 ~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~g----~~p~~i~i~~~~~GkP~l~~~~~~~~~~~~~~ 136 (253)
+.+.|+++|++.+.... .+++.+++++|.++|+++.+.+ +.| +.+.+++|.+++.|+|++... ....++
T Consensus 29 ~~r~ft~~E~~~~~~~~-~~~~~~~la~rwaaKEA~~KAl-g~G~~~~~~~~dieI~~~~~G~P~v~l~-----~~~~~~ 101 (122)
T 3hyk_A 29 MERILTENERNVAKGLK-GSRLTEFVAGRFAAKEAYSKAV-GTGIGKEVSFLDIEVRNDDRGKPILITS-----TEHIVH 101 (122)
T ss_dssp HHHHSCHHHHHHHTTCC-THHHHHHHHHHHHHHHHHHHHH-TSCSSSSCCGGGCEEEECTTSCEEEECS-----CSSEEE
T ss_pred HHHcCCHHHHHHHHhCC-cchHHHHHHHHHHHHHHHHHHh-ccCccCCcCceEEEEEECCCCCeEEEEc-----CCCCEE
Confidence 34789999999998764 5778899999999999988773 333 667899999999999999743 125789
Q ss_pred EEEcccccceeEEE
Q 025417 137 FNISHTSSLVACGV 150 (253)
Q Consensus 137 fSISHs~~~v~~a~ 150 (253)
+||||+++++++.+
T Consensus 102 vSISH~~~~A~A~v 115 (122)
T 3hyk_A 102 LSISHSKEFAVAQV 115 (122)
T ss_dssp EEEEECSSEEEEEE
T ss_pred EEEECCCCEEEEEE
Confidence 99999999976544
No 18
>1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A*
Probab=98.98 E-value=2.6e-09 Score=82.70 Aligned_cols=83 Identities=16% Similarity=0.217 Sum_probs=67.6
Q ss_pred hccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcCC---CCCCceeEeeCCCCCceeecCCCCCCCCCCeEEE
Q 025417 62 SELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ---VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLHFN 138 (253)
Q Consensus 62 ~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~g---~~p~~i~i~~~~~GkP~l~~~~~~~~~~~~~~fS 138 (253)
.+.++++|++.+.+.. ++++.+++++|.++|+++.+. .|.| +++.+++|..+++|+|++.... ....+++|
T Consensus 29 ~r~~t~~E~~~~~~~~-~~~~~~~~a~rwaaKEA~~Ka-lG~gl~~~~~~~i~i~~~~~g~P~l~~~~----~~~~~~~S 102 (122)
T 1fth_A 29 KRVLTALEMERFTSLK-GRRQIEYLAGRWSAKEAFSKA-MGTGISKLGFQDLEVLNNERGAPYFSQAP----FSGKIWLS 102 (122)
T ss_dssp HHHSCHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHH-HTSCSSSSCGGGCEEEECTTSCEEEEECS----CCSEEEEE
T ss_pred HHcCCHHHHHHHHcCC-cchHHHHHHHHHHHHHHHHHH-hCCCccccccceEEEecCCCCCeEEEecC----CCCeEEEE
Confidence 4689999999998864 578899999999999999887 3444 5678999999999999986431 12478999
Q ss_pred EcccccceeEEE
Q 025417 139 ISHTSSLVACGV 150 (253)
Q Consensus 139 ISHs~~~v~~a~ 150 (253)
|||+++++++.+
T Consensus 103 ish~~~ya~A~v 114 (122)
T 1fth_A 103 ISHTDQFVTASV 114 (122)
T ss_dssp EEECSSEEEEEE
T ss_pred EECCCCCEEEEE
Confidence 999999976544
No 19
>3ota_A Holo-[acyl-carrier-protein] synthase; structural genomics, center for structural genomics of infec diseases, csgid; HET: COA; 1.85A {Vibrio cholerae o1 biovar el tor} PDB: 3qmn_A*
Probab=98.96 E-value=1.6e-09 Score=85.01 Aligned_cols=86 Identities=14% Similarity=0.160 Sum_probs=65.9
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcC----CCCCCceeEeeCCCCCceeecCCC-----CCCC
Q 025417 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC----QVNPRSLKFKKTIYGKPEVDWENG-----DKWC 131 (253)
Q Consensus 61 ~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~----g~~p~~i~i~~~~~GkP~l~~~~~-----~~~~ 131 (253)
+.+.|++.|++.+... +++.+|+++|.++|+++...| +. |+.+.+|+|.+++.|||++...+. ....
T Consensus 30 ~~Rift~~E~~~~~~~---~~~~~~lA~RfAAKEA~~KAl-Gtg~~~~~~~~dIeI~~d~~GkP~v~l~g~~~~~~~~~~ 105 (129)
T 3ota_A 30 ARRILTDSELEQFHAS---KQQGRFLAKRFAAKEAASKAL-GTGIAQGVTFHDFTISHDKLGKPLLILSGQAAELASQLQ 105 (129)
T ss_dssp HHHHSCHHHHHHHHHC---SCHHHHHHHHHHHHHHHHHHH-TSCSCTTCCGGGEEEEECTTCCEEEEECHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHh-cccCCCCCCceEEEEEECCCCCceEEeChHHHHHHHHcC
Confidence 3579999999988764 456789999999999998884 33 467899999999999999963210 0012
Q ss_pred CCCeEEEEcccccceeEEE
Q 025417 132 PPPLHFNISHTSSLVACGV 150 (253)
Q Consensus 132 ~~~~~fSISHs~~~v~~a~ 150 (253)
...+++||||+++++++.+
T Consensus 106 ~~~i~lSiSh~~~~AiA~v 124 (129)
T 3ota_A 106 VENIHLSISDERHYAMATV 124 (129)
T ss_dssp CCEEEEEEEECSSEEEEEE
T ss_pred CCeEEEEEeCCCCeEEEEE
Confidence 3568999999999976533
No 20
>3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* 4hc6_A
Probab=98.95 E-value=1.8e-09 Score=84.72 Aligned_cols=85 Identities=15% Similarity=0.247 Sum_probs=65.3
Q ss_pred ccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcCC----------CCCCceeEeeCCCCCceeecCCCC--CC
Q 025417 63 ELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ----------VNPRSLKFKKTIYGKPEVDWENGD--KW 130 (253)
Q Consensus 63 ~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~g----------~~p~~i~i~~~~~GkP~l~~~~~~--~~ 130 (253)
+.|+++|++.+... ++++.+++++|.++|+++.+. .+.| +.+.+++|.+++.|+|++...+.. ..
T Consensus 28 r~ft~~E~~~~~~~--~~~~~~~la~rwAaKEA~~KA-lg~g~~g~~~~~~~~~~~dIeI~~~~~G~P~v~l~g~~~~~~ 104 (129)
T 3gwm_A 28 ETFTPGERRDAADK--SSSAARHLAARWAAKEAVIKA-WSSSRFSKRPALPEGIHRDIEVVTDMWGRPKVRLSGEIAKHL 104 (129)
T ss_dssp TTSCHHHHHHHTST--TSHHHHHHHHHHHHHHHHHHH-HHTSTTCCSSSCCTTHHHHEEEEECTTSCEEEEECHHHHHHT
T ss_pred hhCCHHHHHHHHhC--chhHHHHHHHHHHHHHHHHHH-hccCccccccccCccceeEEEEEECCCCCeEEEECHHHHHhc
Confidence 89999999998762 567889999999999999887 3444 336889999999999999742100 00
Q ss_pred CCCCeEEEEcccccceeEEE
Q 025417 131 CPPPLHFNISHTSSLVACGV 150 (253)
Q Consensus 131 ~~~~~~fSISHs~~~v~~a~ 150 (253)
....+++||||+++++++.+
T Consensus 105 ~~~~~~vSISH~~~~A~A~v 124 (129)
T 3gwm_A 105 EDVTIHVSLTHEDQTAAAVA 124 (129)
T ss_dssp TTCEEEEEEEEETTEEEEEE
T ss_pred CCCcEEEEEeCCCCEEEEEE
Confidence 02468999999999976543
No 21
>3h88_A Holo-[acyl-carrier-protein] synthase; alpha-beta structure, structural genomics of infectious diseases, cytoplasm, fatty acid biosynthesis; HET: COA; 1.85A {Vibrio cholerae} PDB: 3ota_A* 3qmn_A*
Probab=98.89 E-value=3.5e-09 Score=83.09 Aligned_cols=86 Identities=14% Similarity=0.157 Sum_probs=65.7
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcC----CCCCCceeEeeCCCCCceeecCCCC-----CCC
Q 025417 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC----QVNPRSLKFKKTIYGKPEVDWENGD-----KWC 131 (253)
Q Consensus 61 ~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~----g~~p~~i~i~~~~~GkP~l~~~~~~-----~~~ 131 (253)
+.+.|+++|++.+.... ++.+++++|.++|+++.+.+ +. ++.+.+++|.+++.|+|++...+.. ..+
T Consensus 30 ~~r~ft~~E~~~~~~~~---~~~~~la~rwaaKEA~~KAl-g~g~~~~~~~~dieI~~~~~G~P~~~l~g~~~~~~~~~g 105 (129)
T 3h88_A 30 ARRILTDSELEQFHASK---QQGRFLAKRFAAKEAASKAL-GTGIAQGVTFHDFTISHDKLGKPLLILSGQAAELASQLQ 105 (129)
T ss_dssp HHHHSCHHHHHHHHHCS---CHHHHHHHHHHHHHHHHHHT-TSCSCTTCCGGGEEEEECTTSCEEEEECHHHHHHHHHTT
T ss_pred HHHhCCHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHh-ccCccCCccceEEEEEECCCCCEEEEECHHHHHHHHHcC
Confidence 35799999999998764 46889999999999998873 33 3567899999999999999742100 001
Q ss_pred CCCeEEEEcccccceeEEE
Q 025417 132 PPPLHFNISHTSSLVACGV 150 (253)
Q Consensus 132 ~~~~~fSISHs~~~v~~a~ 150 (253)
...+++||||+++++++.+
T Consensus 106 ~~~~~vSISH~~~~A~A~v 124 (129)
T 3h88_A 106 VENIHLSISDERHYAMATV 124 (129)
T ss_dssp CCEEEEEEEECSSEEEEEE
T ss_pred CCEEEEEEECCCCeEEEEE
Confidence 3478999999999976543
No 22
>2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B
Probab=98.80 E-value=1.9e-08 Score=77.90 Aligned_cols=86 Identities=9% Similarity=0.094 Sum_probs=64.5
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcC-----CCCCCceeEeeCCCCCceeecCCCC-----CC
Q 025417 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC-----QVNPRSLKFKKTIYGKPEVDWENGD-----KW 130 (253)
Q Consensus 61 ~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~-----g~~p~~i~i~~~~~GkP~l~~~~~~-----~~ 130 (253)
+.+.++++|++.+.... ++.+++++|.++|+++.+.+ +. ++++.+++|..+++|+|++...+.. ..
T Consensus 22 ~~r~ft~~E~~~~~~~~---~~~~~la~rwaaKEA~~KAl-g~g~~~~~~~~~~iei~~~~~G~P~l~l~g~~~~~~~~~ 97 (122)
T 2was_A 22 IERNFTPQEIEYCSAQP---SVQSSFAGTWSAKEAVFKSL-GVKSLGGGAALKDIEIVRVNKNAPAVELHGNAKKAAEEA 97 (122)
T ss_dssp HHHHSCHHHHHHHHTSS---SHHHHHHHHHHHHHHHHHHH-CC-------CCTTEEEEEETTEEEEEEECHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHcCC---cHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCEEEEEECCCCCeEEEEChHHHHHHHHc
Confidence 45789999999998653 45789999999999998873 33 2578899999999999998642100 00
Q ss_pred CCCCeEEEEcccccceeEEE
Q 025417 131 CPPPLHFNISHTSSLVACGV 150 (253)
Q Consensus 131 ~~~~~~fSISHs~~~v~~a~ 150 (253)
+...+++||||+++++++.+
T Consensus 98 ~~~~~~vSiSH~~~~A~A~v 117 (122)
T 2was_A 98 GVTDVKVSISHDDLQAVAVA 117 (122)
T ss_dssp TCCEEEEEEEECSSEEEEEE
T ss_pred CCCeEEEEEEcCCCcEEEEE
Confidence 12478999999999976544
No 23
>2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii}
Probab=98.78 E-value=1.3e-08 Score=82.90 Aligned_cols=89 Identities=13% Similarity=0.143 Sum_probs=61.7
Q ss_pred HhccCCHHHHHHHhccCCh-----------HHHHHHHHHHHHHHHHHHhhhhcCC--------CCCCceeEeeCCCCCce
Q 025417 61 YSELLSPREKKNLYHMQGD-----------QFKKSALLARVLVRTTIARYQTNCQ--------VNPRSLKFKKTIYGKPE 121 (253)
Q Consensus 61 ~~~~L~~~E~~r~~~~~~~-----------~~r~~~l~~R~llr~~L~~~~~~~g--------~~p~~i~i~~~~~GkP~ 121 (253)
+.+.|++.|++.+.....+ +++.+|+++|.++|+++.+.+ +.| +.+.+++|.+++.|+|+
T Consensus 29 ~~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~lAgRfAAKEA~~KAl-GtGi~~~~~~~~~~~dIeI~~d~~G~P~ 107 (163)
T 2qg8_A 29 IKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSM-GRGLSSISKYGLSMNDIEIKNDKYGKPH 107 (163)
T ss_dssp HHHHSCHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC-----CBCGGGEEEEECTTSCEE
T ss_pred HHhcCCHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHHHh-cCCCcccccCCccccEEEEEECCCCCEE
Confidence 3478999999999876543 245789999999999998873 333 45789999999999999
Q ss_pred eecCCCC-----CCCCCCeEEEEcccccceeEEE
Q 025417 122 VDWENGD-----KWCPPPLHFNISHTSSLVACGV 150 (253)
Q Consensus 122 l~~~~~~-----~~~~~~~~fSISHs~~~v~~a~ 150 (253)
+...+.. ..+...+++||||+++++++.+
T Consensus 108 v~l~g~a~~~~~~~g~~~i~lSISHd~~~avA~v 141 (163)
T 2qg8_A 108 VYLYGKAKKVAYEMGIVKIFLSISDEKIINSQTN 141 (163)
T ss_dssp EEECHHHHHHHHHTTCCEEEEEEEEEEC------
T ss_pred EEEChHHHHHHHHcCCCEEEEEEECCCCcEEEEE
Confidence 8632100 0013478999999999976544
No 24
>2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii}
Probab=98.74 E-value=1.5e-08 Score=83.90 Aligned_cols=89 Identities=13% Similarity=0.143 Sum_probs=60.0
Q ss_pred HhccCCHHHHHHHhccCCh-----------HHHHHHHHHHHHHHHHHHhhhhcCC--------CCCCceeEeeCCCCCce
Q 025417 61 YSELLSPREKKNLYHMQGD-----------QFKKSALLARVLVRTTIARYQTNCQ--------VNPRSLKFKKTIYGKPE 121 (253)
Q Consensus 61 ~~~~L~~~E~~r~~~~~~~-----------~~r~~~l~~R~llr~~L~~~~~~~g--------~~p~~i~i~~~~~GkP~ 121 (253)
+.+.|++.|++.+.....+ +++.+|+++|.++|+++.+.+ +.| +.+.+|+|..++.|+|+
T Consensus 48 ~~RifT~~E~~~~~~~~~~~~~~~~~~~~~~~~a~~lAgRfAAKEAv~KAl-GtGi~~~~~~g~~~~dIEI~~d~~GkP~ 126 (182)
T 2bdd_A 48 IKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSM-GRGLSSISKYGLSMNDIEIKNDKYGKPH 126 (182)
T ss_dssp HHHHSCHHHHHHHHTC-----------CHHHHHHHHHHHHHHHHHHHHHHT-TC---------CCGGGEEEEECTTSCEE
T ss_pred HHhhCCHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcCcCEEEEEECCCCCEE
Confidence 3478999999999876433 256789999999999998873 333 45789999999999999
Q ss_pred eecCCCC-----CCCCCCeEEEEcccccceeEEE
Q 025417 122 VDWENGD-----KWCPPPLHFNISHTSSLVACGV 150 (253)
Q Consensus 122 l~~~~~~-----~~~~~~~~fSISHs~~~v~~a~ 150 (253)
+...+.. ..+...+++||||+++++++.+
T Consensus 127 v~L~g~a~~~~~~~gi~~i~lSISHd~~yavA~V 160 (182)
T 2bdd_A 127 VYLYGKAKKVAYEMGIVKIFLSISDEKIINSQTN 160 (182)
T ss_dssp EEECHHHHHHHHHHTCCEEEEEEEEEC-------
T ss_pred EEECHHHHHHHHHcCCCEEEEEEECCCCcEEEEE
Confidence 8532100 0012478999999999976554
No 25
>3nfd_A Phosphopantetheine protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A*
Probab=98.72 E-value=1.7e-08 Score=81.38 Aligned_cols=89 Identities=13% Similarity=0.140 Sum_probs=63.3
Q ss_pred hccCCHHHHHHHhccCCh----------HHHHHHHHHHHHHHHHHHhhh-hc----------CCCCCCceeEeeCCCCCc
Q 025417 62 SELLSPREKKNLYHMQGD----------QFKKSALLARVLVRTTIARYQ-TN----------CQVNPRSLKFKKTIYGKP 120 (253)
Q Consensus 62 ~~~L~~~E~~r~~~~~~~----------~~r~~~l~~R~llr~~L~~~~-~~----------~g~~p~~i~i~~~~~GkP 120 (253)
.+.|++.|++.+...... .++.+|+++|.++|+++.+.+ ++ .++.+.+|+|.+++.|+|
T Consensus 32 ~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~lAgrfAAKEA~~KAlg~g~~g~~~~~~~~~~~~~dIeI~~d~~G~P 111 (153)
T 3nfd_A 32 EQVFSPLERRHAQTRRSAAADATNSSLAGSRTEHLAGRWAAKEAFIKAWSQAIYGKPPVIEPDLVNFAEIEVLPDRWGRV 111 (153)
T ss_dssp GGSSCHHHHHHHHCC------------CCTTHHHHHHHHHHHHHHHHHHHHHTTTSCCSSCGGGCCGGGEEEEECTTSCE
T ss_pred HhhCCHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHhccccccccccccccCCcceEEEEEECCCCCe
Confidence 478999999998876432 247889999999999998774 12 246678999999999999
Q ss_pred eeecCCCC--CCCCCCeEE----EEcccccceeEEE
Q 025417 121 EVDWENGD--KWCPPPLHF----NISHTSSLVACGV 150 (253)
Q Consensus 121 ~l~~~~~~--~~~~~~~~f----SISHs~~~v~~a~ 150 (253)
++...... ......+++ ||||+++++++.+
T Consensus 112 ~v~l~g~~~~~~~~~~~~v~~~lSISHd~~~AvA~v 147 (153)
T 3nfd_A 112 ALQLKGEVAAKLQESIGDVELALSISHDGDYATALC 147 (153)
T ss_dssp EEEECHHHHHHHHHHHCSEEEEEEEEEETTEEEEEE
T ss_pred EEEECHHHHHHcCCceEEECCceEecCCCCEEEEEE
Confidence 99742100 000013567 9999999976543
No 26
>2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A*
Probab=98.72 E-value=4.6e-09 Score=83.85 Aligned_cols=87 Identities=13% Similarity=0.049 Sum_probs=63.7
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhh-hcCCCCCCceeEeeCCCCCceeecCCCC-----CCCCCC
Q 025417 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQ-TNCQVNPRSLKFKKTIYGKPEVDWENGD-----KWCPPP 134 (253)
Q Consensus 61 ~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~-~~~g~~p~~i~i~~~~~GkP~l~~~~~~-----~~~~~~ 134 (253)
+.+.|++.|++.+... +++.+|+++|.++|+++.+.+ .+.++.+.+++|..++.|+|++...... ..+...
T Consensus 47 ~~rift~~E~~~~~~~---~~~~~~lAgRfAAKEAv~KAlG~G~~~~~~dieI~~~~~G~P~v~l~g~~~~~~~~~g~~~ 123 (143)
T 2wds_A 47 AGRLFLESELLLPGGE---RRGVASLAARFAAKEALAKALGAPAGLLWTDAEVWVEAGGRPRLRVTGTVAARAAELGVAS 123 (143)
T ss_dssp HHHHCCGGGGBCTTSS---BCCHHHHHHHHHHHHHHHHHTTCCTTCCGGGEEEEECTTSCEEEEECHHHHHHHHHHTCCE
T ss_pred HHhcCCHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCCCcEEEEChHHHHHHHhcCCCe
Confidence 3478999999876653 456899999999999998873 1234567899999999999998531100 001237
Q ss_pred eEEEEcccccceeEEE
Q 025417 135 LHFNISHTSSLVACGV 150 (253)
Q Consensus 135 ~~fSISHs~~~v~~a~ 150 (253)
+++||||+++++++.+
T Consensus 124 ~~vSISH~~~~AvA~v 139 (143)
T 2wds_A 124 WHVSLSADAGIASAVV 139 (143)
T ss_dssp EEEEEEEETTEEEEEE
T ss_pred EEEEEECCCCcEEEEE
Confidence 8999999999986543
No 27
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=98.70 E-value=1.7e-09 Score=114.77 Aligned_cols=96 Identities=19% Similarity=0.239 Sum_probs=0.0
Q ss_pred ccccccchhHHHHhhhhhHHHHHHhcCCHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhccCCC-CC-CCCCceEEEEe
Q 025417 153 NVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRG-FS-AAPFNTFTIRA 230 (253)
Q Consensus 153 ~~~VGVDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~G-L~-~~~l~~~~i~~ 230 (253)
+..|||||+.+.+ +...-..+++++||+.|++++...+. +...|...|++|||++||+|+| +. +..|++|+|..
T Consensus 1758 ~~GIGiDIveI~R-i~~~~~~F~~RifT~~E~~~~~~~~~---~~~~lAgRfAAKEA~~KAlGtG~~~~g~~~~dIeI~~ 1833 (1878)
T 2uv9_A 1758 ASRVGVDVESVDS-INIDNEEFISRNFTEREQAYCRRAPN---PRASFAGRWTAKEAIFKSLGVASKGAGAAMREIEVIN 1833 (1878)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeEEeeeeHH-HhhhhhHHHHHcCCHHHHHHHHhCcc---HHHHHHHHHHHHHHHHHHhccCcCCCCCCccEEEEEE
Confidence 4589999999986 33234578999999999999877542 3567889999999999999996 54 35789999977
Q ss_pred cCCC--------------------cccEEeecCCCeEEEEee
Q 025417 231 RVVK--------------------MGGFHHFDTQHSEVKLVF 252 (253)
Q Consensus 231 ~~~~--------------------~~~~~~~~~~~~~~~~~~ 252 (253)
++.+ ...||++|+.+|+++++.
T Consensus 1834 d~~G~P~v~l~g~a~~~~~~~g~~~i~lSISHd~~yA~A~vI 1875 (1878)
T 2uv9_A 1834 DANGAPEVHLHGAAAEAAKQAGVKTVNVSISHGDLQAVAVAV 1875 (1878)
T ss_dssp ------------------------------------------
T ss_pred CCCCCeEEEECHHHHHHHHHcCCCeEEEEEecCCCeEEEEEE
Confidence 6543 226799999999998764
No 28
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=98.47 E-value=1.7e-08 Score=107.37 Aligned_cols=96 Identities=21% Similarity=0.283 Sum_probs=0.0
Q ss_pred ccccccchhHHHHhhhhhHHHHHHhcCCHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhccCCC-CC-CCCCceEEEEe
Q 025417 153 NVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRG-FS-AAPFNTFTIRA 230 (253)
Q Consensus 153 ~~~VGVDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~Ka~G~G-L~-~~~l~~~~i~~ 230 (253)
+..|||||..+.+ +...-..+++++||+.|+++....+. ....+...|++|||+.||+|+| +. +..|++|+|..
T Consensus 1766 ~~GIGiDIveI~R-i~~~~~~F~~RifT~~E~~~~~~~~~---~~~~lAgRfAAKEA~~KAlGtgg~~~~~~~~dIeI~~ 1841 (1887)
T 2uv8_A 1766 NGGVGVDVELITS-INVENDTFIERNFTPQEIEYCSAQPS---VQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVR 1841 (1887)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeeeeeecHH-HhhhchHHHHHcCCHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhCcCcCCCCCCccEEEEEE
Confidence 4589999999876 33333578999999999988876432 3456778999999999999994 53 35789999876
Q ss_pred cCCC--------------------cccEEeecCCCeEEEEee
Q 025417 231 RVVK--------------------MGGFHHFDTQHSEVKLVF 252 (253)
Q Consensus 231 ~~~~--------------------~~~~~~~~~~~~~~~~~~ 252 (253)
++.+ ...||++|+++|+|+++.
T Consensus 1842 ~~~G~P~v~l~g~~~~~~~~~g~~~i~lSISH~~~~A~A~vi 1883 (1887)
T 2uv8_A 1842 VNKNAPAVELHGNAKKAAEEAGVTDVKVSISHDDLQAVAVAV 1883 (1887)
T ss_dssp ------------------------------------------
T ss_pred CCCCCeEEEECHHHHHHHHHcCCCEEEEEEECCCCcEEEEEE
Confidence 6533 235899999999998764
No 29
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1
Probab=97.84 E-value=0.00013 Score=61.96 Aligned_cols=87 Identities=7% Similarity=0.055 Sum_probs=67.4
Q ss_pred HHHhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcCC--CCCCceeEeeCCCCCceeecCCCCCCCCCCeE
Q 025417 59 SQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ--VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLH 136 (253)
Q Consensus 59 ~~~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~g--~~p~~i~i~~~~~GkP~l~~~~~~~~~~~~~~ 136 (253)
..+.+.+++.|++.+.... ..++.++++.+..+|+++.+. .|.| .++.+++|..++.|+|.+..+. ....++
T Consensus 117 ~~~~~~~t~~E~~~l~~~~-~~~~~~~~~~~wt~KEA~~Ka-~G~gl~~~~~~~~i~~~~~g~~~~~~~~----~~~~~~ 190 (228)
T 1qr0_A 117 EIAKRFFSKTEYSDLLAKD-KDEQTDYFYHLWSMKESFIKQ-EGKGLSLPLDSFSVRLHQDGQVSIELPD----SHSPCY 190 (228)
T ss_dssp HHHSSSSCHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHHHH-HCSTTSCCSSCCEEEECGGGCEEEECSC----TTSCCE
T ss_pred HHHHHhCCHHHHHHHHhCC-hhhHHHHHHHHHHHHHHHHHH-hCCCCCCCCceEEEeeCCCCCeEEecCC----CCCCeE
Confidence 4456799999999998763 467788999999999999887 3444 5678899999999999997532 123566
Q ss_pred E-EEcccccceeEEEc
Q 025417 137 F-NISHTSSLVACGVT 151 (253)
Q Consensus 137 f-SISHs~~~v~~a~s 151 (253)
+ ++||+++++++.+.
T Consensus 191 ~~s~~~~~~y~~Av~~ 206 (228)
T 1qr0_A 191 IKTYEVDPGYKMAVCA 206 (228)
T ss_dssp EEEECSCTTEEEEEEE
T ss_pred EEEEecCCCEEEEEEE
Confidence 5 99999999765554
No 30
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=97.56 E-value=1e-05 Score=86.41 Aligned_cols=84 Identities=10% Similarity=0.109 Sum_probs=0.0
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcC-----CCCCCceeEeeCCCCCceeecCCCC-----CC
Q 025417 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC-----QVNPRSLKFKKTIYGKPEVDWENGD-----KW 130 (253)
Q Consensus 61 ~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~-----g~~p~~i~i~~~~~GkP~l~~~~~~-----~~ 130 (253)
+.+.|++.|++++.+. .++.+++++|+++|+++.+.+ +. |+.+.+|+|.+++.|||++...... ..
T Consensus 1787 ~~RifT~~E~~~~~~~---~~~~~~lAgRfAAKEA~~KAl-Gtgg~~~~~~~~dIeI~~~~~G~P~v~l~g~~~~~~~~~ 1862 (1887)
T 2uv8_A 1787 IERNFTPQEIEYCSAQ---PSVQSSFAGTWSAKEAVFKSL-GVKSLGGGAALKDIEIVRVNKNAPAVELHGNAKKAAEEA 1862 (1887)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHcCCHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHh-CcCcCCCCCCccEEEEEECCCCCeEEEECHHHHHHHHHc
Confidence 4579999999888653 456789999999999998873 22 3678899999999999998643211 01
Q ss_pred CCCCeEEEEcccccceeE
Q 025417 131 CPPPLHFNISHTSSLVAC 148 (253)
Q Consensus 131 ~~~~~~fSISHs~~~v~~ 148 (253)
+...+++||||+++++++
T Consensus 1863 g~~~i~lSISH~~~~A~A 1880 (1887)
T 2uv8_A 1863 GVTDVKVSISHDDLQAVA 1880 (1887)
T ss_dssp ------------------
T ss_pred CCCEEEEEEECCCCcEEE
Confidence 124689999999999754
No 31
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=97.49 E-value=1.5e-05 Score=85.05 Aligned_cols=84 Identities=15% Similarity=0.176 Sum_probs=0.0
Q ss_pred HhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcC-----CCCCCceeEeeCCCCCceeecCCCC-----CC
Q 025417 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC-----QVNPRSLKFKKTIYGKPEVDWENGD-----KW 130 (253)
Q Consensus 61 ~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~-----g~~p~~i~i~~~~~GkP~l~~~~~~-----~~ 130 (253)
+.+.|++.|++.+... .++.+++++|+++|+++.+.+ +. |+.+.+|+|.++++|||++...... ..
T Consensus 1779 ~~RifT~~E~~~~~~~---~~~~~~lAgRfAAKEA~~KAl-GtG~~~~g~~~~dIeI~~d~~G~P~v~l~g~a~~~~~~~ 1854 (1878)
T 2uv9_A 1779 ISRNFTEREQAYCRRA---PNPRASFAGRWTAKEAIFKSL-GVASKGAGAAMREIEVINDANGAPEVHLHGAAAEAAKQA 1854 (1878)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHcCCHHHHHHHHhC---ccHHHHHHHHHHHHHHHHHHh-ccCcCCCCCCccEEEEEECCCCCeEEEECHHHHHHHHHc
Confidence 4578999999888754 356789999999999998873 33 3577899999999999998643211 01
Q ss_pred CCCCeEEEEcccccceeE
Q 025417 131 CPPPLHFNISHTSSLVAC 148 (253)
Q Consensus 131 ~~~~~~fSISHs~~~v~~ 148 (253)
+...+++||||+++++++
T Consensus 1855 g~~~i~lSISHd~~yA~A 1872 (1878)
T 2uv9_A 1855 GVKTVNVSISHGDLQAVA 1872 (1878)
T ss_dssp ------------------
T ss_pred CCCeEEEEEecCCCeEEE
Confidence 124679999999999754
No 32
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A*
Probab=96.87 E-value=0.0055 Score=54.70 Aligned_cols=91 Identities=7% Similarity=0.006 Sum_probs=64.8
Q ss_pred HHhccCCHHHHHHHhccCChHHHHHHHHHHHHHHHHHHhhhhcCC--CCCCceeEeeC----CCCCceeecCC-CCCCCC
Q 025417 60 QYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ--VNPRSLKFKKT----IYGKPEVDWEN-GDKWCP 132 (253)
Q Consensus 60 ~~~~~L~~~E~~r~~~~~~~~~r~~~l~~R~llr~~L~~~~~~~g--~~p~~i~i~~~----~~GkP~l~~~~-~~~~~~ 132 (253)
.+.+.+++.|++.+.....+..+.++++.+..+|+++.+. .|.| .++.+++|..+ +.|+|+....- .++...
T Consensus 157 ~~~r~ft~~E~~~l~~~~~~~~~~~~f~~~WtaKEA~~KA-~G~Gl~~~l~~iev~~~p~~~~~g~p~~~~~v~l~g~~~ 235 (323)
T 2c43_A 157 IMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKA-IGVGLGFELQRLEFDLSPLNLDIGQVYKETRLFLDGEEE 235 (323)
T ss_dssp HTGGGSCHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHH-HTCCSCCCGGGEEEECCSSCCCTTCCBCCCEEEETTEEC
T ss_pred HHHHhCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHh-cCCCCCCCCCeEEEEeCccccccCCceecceeeecCCCC
Confidence 3457899999999987766567888999999999998877 3444 46788899887 68999752100 000012
Q ss_pred CCeEE-EEcccccceeEEEc
Q 025417 133 PPLHF-NISHTSSLVACGVT 151 (253)
Q Consensus 133 ~~~~f-SISHs~~~v~~a~s 151 (253)
..++| +++|.++++++.+.
T Consensus 236 ~~w~~~~~~~~~~y~~Ava~ 255 (323)
T 2c43_A 236 KEWAFEESKIDEHHFVAVAL 255 (323)
T ss_dssp TTEEEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEecCCCcEEEEEE
Confidence 46788 78999999755443
No 33
>2z0r_A Putative uncharacterized protein TTHA0547; alpha/beta protein, structural genomics, unknown function; 2.30A {Thermus thermophilus}
Probab=65.88 E-value=1.6 Score=31.98 Aligned_cols=27 Identities=30% Similarity=0.380 Sum_probs=19.5
Q ss_pred HHHHHHHHHhccC-CCCCCCCCceEEEEecCCC
Q 025417 203 LWTLKEAYVKAVG-RGFSAAPFNTFTIRARVVK 234 (253)
Q Consensus 203 ~Wt~KEA~~Ka~G-~GL~~~~l~~~~i~~~~~~ 234 (253)
-|++||+++|++| .|.. .+-+...|+.
T Consensus 58 ~w~lKE~~l~Al~~lgv~-----~~lvDy~Pg~ 85 (103)
T 2z0r_A 58 SRALKEAYLRALGMLQVE-----AVMVDYRPGT 85 (103)
T ss_dssp SHHHHHHHHHHHHHTTCC-----EEEESCCSSC
T ss_pred hhHHHHHHHHHHHHcCCc-----EEEEecCCCc
Confidence 3999999999988 4553 3666655654
No 34
>1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A
Probab=48.81 E-value=2 Score=38.49 Aligned_cols=76 Identities=26% Similarity=0.326 Sum_probs=38.3
Q ss_pred CCeEEEEcccccceeEEEccccccccchhHHHHhhhhhHHHHHHhcCCHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHh
Q 025417 133 PPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVK 212 (253)
Q Consensus 133 ~~~~fSISHs~~~v~~a~s~~~~VGVDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~KEA~~K 212 (253)
..+.+++.|.++.+.+.+. +...|+|-|.+..+ .+.+...+++|.+ .+++.+-....|-..++.|+...+
T Consensus 138 g~I~i~~~~~~~~v~i~V~-D~G~Gi~~~~~~~~------a~~~gl~~~~~~~---~~~~~~~~~~iF~p~fst~~~~~~ 207 (379)
T 1b3q_A 138 GTLILSARHEGNNVVIEVE-DDGRGIDKEKIIRK------AIEKGLIDESKAA---TLSDQEILNFLFVPGFSTKEKVSE 207 (379)
T ss_dssp EEEEEEEEEETTEEEEEEE-ECSCCCCHHHHHHH------HHHSSSCCSTTTT---TSCTHHHHSGGGSTTCC-------
T ss_pred cEEEEEEEEeCCEEEEEEE-ECCCCCCHHHHHHH------HHHcCCCChhhhh---cCCHHHHHHHhcCCCCccCCccCC
Confidence 4678999999999999998 77889999987532 2234445554422 122111112233334555665555
Q ss_pred ccCCCC
Q 025417 213 AVGRGF 218 (253)
Q Consensus 213 a~G~GL 218 (253)
.-|.|+
T Consensus 208 ~~G~Gl 213 (379)
T 1b3q_A 208 VSGRGV 213 (379)
T ss_dssp ----CC
T ss_pred CCCccc
Confidence 455555
No 35
>2wpv_B Ubiquitin-like protein MDY2; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_B
Probab=32.16 E-value=13 Score=24.01 Aligned_cols=12 Identities=50% Similarity=0.661 Sum_probs=10.3
Q ss_pred chhhhhhhHhhh
Q 025417 3 SFVSKRLSLMMM 14 (253)
Q Consensus 3 ~~~~~~~~~~~~ 14 (253)
.|||||||+-+.
T Consensus 11 EFvsKFLtLatl 22 (59)
T 2wpv_B 11 EFVSKFLTLATL 22 (59)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHHHh
Confidence 599999999873
No 36
>2dbh_A Tumor necrosis factor receptor superfamily member 21; apoptosis, TNF receptor superfamily, NF-kappab, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.01 E-value=84 Score=21.71 Aligned_cols=32 Identities=19% Similarity=0.485 Sum_probs=26.3
Q ss_pred HhcCCHHHHHHHhcCCCchHHHHHHHHHHHHH
Q 025417 176 KRYFSPDEVKLLTAISDPEIQRQELIKLWTLK 207 (253)
Q Consensus 176 ~~~fs~~E~~~l~~~~~~~~~~~~f~~~Wt~K 207 (253)
-++++|+|..-+...|..+++..+++.+-..|
T Consensus 45 lh~lnpee~~vi~eipqaedkldrlfeii~~~ 76 (102)
T 2dbh_A 45 LHFLNPEELRVIEEIPQAEDKLDRLFEIIGVK 76 (102)
T ss_dssp HHHSCHHHHHHHHTCCSHHHHHHHHHHHHHHH
T ss_pred HhhcCHHHHhhhhhcchhhhhhHHHhhhhccc
Confidence 47999999999999998777777777766655
No 37
>3kat_A Nacht, LRR and PYD domains-containing protein 1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 3.10A {Homo sapiens}
Probab=21.31 E-value=76 Score=23.14 Aligned_cols=42 Identities=17% Similarity=0.201 Sum_probs=29.6
Q ss_pred HHHHhcCCHHHHHHHhcCCCchHHHHHHHHH-----HHHHHHHHhcc
Q 025417 173 AFAKRYFSPDEVKLLTAISDPEIQRQELIKL-----WTLKEAYVKAV 214 (253)
Q Consensus 173 ~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~-----Wt~KEA~~Ka~ 214 (253)
.+...+++.+|.+.+.+.+...++.+.++.+ +++||.+++++
T Consensus 42 ~Ll~~VLteee~e~I~ae~T~q~k~R~Lld~v~~kG~~A~~~F~~~L 88 (107)
T 3kat_A 42 KLHGQVLSQEQYERVLAENTRPSQMRKLFSLSQSWDRKCKDGLYQAL 88 (107)
T ss_dssp HHTTTTSCHHHHHHHHHCCSHHHHHHHHHHGGGGCCTTHHHHHHHHH
T ss_pred HHHHhhCCHHHHHHHHhCCCCHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 4455699999999999988766666666542 34566666653
Done!