Your job contains 1 sequence.
>025418
MSSLLLSNPNLSTSFLPCKIPGYENTRKTAFCPLSRSSKVARCAVDTPSGGNMPTFSRIK
VWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHERSEESIEAAFEKLLMTSFRRRKKEKI
NLKSRLKKQVEESPPWFKNLLNFVELPPKDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVA
VSLAACIYFLNEKTKSLARASIIGLGALASGWILGSVVVPMIPTVLIHPTWTLELLTSLV
AYFFLFLACTFFK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025418
(253 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2178267 - symbol:CDF1 "CELL GROWTH DEFECT FACT... 950 1.6e-95 1
TAIR|locus:2080883 - symbol:AT3G51140 "AT3G51140" species... 346 1.6e-31 1
>TAIR|locus:2178267 [details] [associations]
symbol:CDF1 "CELL GROWTH DEFECT FACTOR 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008219 "cell death"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008219 GO:GO:0009941
EMBL:AB006708 HOGENOM:HOG000243111 InterPro:IPR021788 Pfam:PF11833
EMBL:AY125520 EMBL:AY143835 EMBL:AB210817 IPI:IPI00538097
RefSeq:NP_197695.1 UniGene:At.43826 ProteinModelPortal:Q9FN50
SMR:Q9FN50 STRING:Q9FN50 PaxDb:Q9FN50 PRIDE:Q9FN50 ProMEX:Q9FN50
EnsemblPlants:AT5G23040.1 GeneID:832368 KEGG:ath:AT5G23040
TAIR:At5g23040 eggNOG:NOG262292 InParanoid:Q9FN50 OMA:QQYAGHE
PhylomeDB:Q9FN50 ProtClustDB:CLSN2686104 Genevestigator:Q9FN50
Uniprot:Q9FN50
Length = 258
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 178/232 (76%), Positives = 200/232 (86%)
Query: 25 NTRKTAFCP---LSRSSKVARCAVDTPSGGNMPTFSRIKVWDPYKRLGISPYASEEEIWG 81
N+ KT+ P +SRS K +C VD+ GGN+PTF R +VWDPYKRLG+SPYASEEEIW
Sbjct: 27 NSSKTSLLPFRNVSRSFKTVKCTVDSSYGGNVPTFPRTRVWDPYKRLGVSPYASEEEIWA 86
Query: 82 SRNFLLEQYTGHERSEESIEAAFEKLLMTSFRRRKKEKINLKSRLKKQVEESPPWFKNLL 141
SRNFLL+QY GHERSEESIE AFEKLLM+SF RRKK KINLKS+LKK+VEESPPW K LL
Sbjct: 87 SRNFLLQQYAGHERSEESIEGAFEKLLMSSFIRRKKTKINLKSKLKKKVEESPPWLKALL 146
Query: 142 NFVELPPKDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACIYFLNEKTKSLARAS 201
+FVE+PP D IFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAAC+YFLNEKTKSL RA
Sbjct: 147 DFVEMPPMDTIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACVYFLNEKTKSLGRAC 206
Query: 202 IIGLGALASGWILGSVVVPMIPTVLIHPTWTLELLTSLVAYFFLFLACTFFK 253
+IG+GAL +GW GS+++PMIPT LI PTWTLELLTSLVAY FLFL+CTF K
Sbjct: 207 LIGIGALVAGWFCGSLIIPMIPTFLIQPTWTLELLTSLVAYVFLFLSCTFLK 258
>TAIR|locus:2080883 [details] [associations]
symbol:AT3G51140 "AT3G51140" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009706
"chloroplast inner membrane" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0006399 "tRNA
metabolic process" evidence=RCA] [GO:0009073 "aromatic amino acid
family biosynthetic process" evidence=RCA] [GO:0009658 "chloroplast
organization" evidence=RCA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=RCA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009706 UniGene:At.859 EMBL:AY035099 EMBL:AY063061
EMBL:AY086657 IPI:IPI00519499 RefSeq:NP_566946.1 UniGene:At.860
ProteinModelPortal:Q94C78 SMR:Q94C78 STRING:Q94C78 PaxDb:Q94C78
PRIDE:Q94C78 EnsemblPlants:AT3G51140.1 GeneID:824278
KEGG:ath:AT3G51140 TAIR:At3g51140 eggNOG:NOG260359
HOGENOM:HOG000243111 InParanoid:Q94C78 OMA:GAFIFSW PhylomeDB:Q94C78
ProtClustDB:CLSN2689106 ArrayExpress:Q94C78 Genevestigator:Q94C78
InterPro:IPR021788 Pfam:PF11833 Uniprot:Q94C78
Length = 278
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 88/248 (35%), Positives = 146/248 (58%)
Query: 25 NTRKTAFCPLSRSSKVA-----RCAVDT----PSGGNMPT-----FSRIKVWDPYKRLGI 70
N R +A+ P+ +SS++A R A+ T S G+M F RI V DPYKRLGI
Sbjct: 39 NNRNSAW-PVLKSSRLALPTQRRNAMITRAMSASFGDMADDSAAIFPRINVKDPYKRLGI 97
Query: 71 SPYASEEEIWGSRNFLLEQYTGHERSEESIEAAFEKLLMTSFRRRKKEKINLKSRLKKQV 130
S ASE+EI G+RNFL++QY GH+ S ++IE+A +K++M F RK KI++ +++ QV
Sbjct: 98 SRMASEDEIQGARNFLIQQYAGHKPSVDAIESAHDKIIMQKFHERKNPKIDISKKVR-QV 156
Query: 131 EESPPWFKNLLNFV----ELPPKDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAAC 186
+S ++NFV + PP V+ + FA +G +++ E GP QV +SL A
Sbjct: 157 RQS-----KVVNFVFERFQTPPNAVLVKTAVTFAVLGVLTVLFPTEEGPTLQVLLSLIAT 211
Query: 187 IYFLNEKTKSLARASIIGLGALASGWILGS-VVVPMIPTVLIHPTWTLELLTSLVAYFFL 245
YF++++ + + G GA W++G+ ++V +IP + P E+++SL++Y L
Sbjct: 212 FYFIHQRLQKKLWTFLYGAGAFIFSWLVGTFLMVSVIPPFIKGPRG-FEVMSSLLSYVLL 270
Query: 246 FLACTFFK 253
++A ++ +
Sbjct: 271 WVASSYLR 278
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 253 237 0.00090 113 3 11 22 0.37 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 608 (65 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.85u 0.08s 21.93t Elapsed: 00:00:01
Total cpu time: 21.85u 0.08s 21.93t Elapsed: 00:00:01
Start: Fri May 10 08:10:32 2013 End: Fri May 10 08:10:33 2013