Query 025418
Match_columns 253
No_of_seqs 188 out of 507
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 09:52:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025418.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025418hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ys8_A RAB-related GTP-binding 99.4 6E-14 2.1E-18 107.2 4.9 52 60-111 25-83 (90)
2 1wjz_A 1700030A21RIK protein; 99.4 7.8E-14 2.7E-18 106.2 4.4 56 56-111 10-79 (94)
3 2dn9_A DNAJ homolog subfamily 99.4 4.9E-13 1.7E-17 98.9 7.2 55 59-113 4-66 (79)
4 2cug_A Mkiaa0962 protein; DNAJ 99.4 8.2E-13 2.8E-17 100.2 8.5 55 60-114 15-76 (88)
5 2yua_A Williams-beuren syndrom 99.4 3.7E-13 1.3E-17 104.3 6.5 61 54-114 9-77 (99)
6 2guz_A Mitochondrial import in 99.4 1.5E-13 5.3E-18 100.8 3.4 56 57-112 9-69 (71)
7 2ctp_A DNAJ homolog subfamily 99.4 4.2E-13 1.4E-17 99.2 5.6 54 59-112 4-64 (78)
8 2ctr_A DNAJ homolog subfamily 99.4 6.5E-13 2.2E-17 100.7 6.6 55 59-113 4-65 (88)
9 1hdj_A Human HSP40, HDJ-1; mol 99.3 8.5E-13 2.9E-17 97.3 5.6 53 61-113 2-61 (77)
10 2och_A Hypothetical protein DN 99.3 1.3E-12 4.4E-17 95.6 6.3 52 60-111 6-62 (73)
11 2ej7_A HCG3 gene; HCG3 protein 99.3 1E-12 3.4E-17 97.9 4.5 51 60-110 7-66 (82)
12 2o37_A Protein SIS1; HSP40, J- 99.3 1.8E-12 6.1E-17 99.2 5.9 53 59-111 5-62 (92)
13 2ctw_A DNAJ homolog subfamily 99.3 7.7E-12 2.6E-16 98.6 8.0 56 59-114 14-77 (109)
14 2dmx_A DNAJ homolog subfamily 99.3 3.9E-12 1.3E-16 96.8 6.0 54 60-113 7-69 (92)
15 1faf_A Large T antigen; J doma 99.3 1.8E-12 6E-17 97.2 3.7 55 59-113 8-68 (79)
16 2ctq_A DNAJ homolog subfamily 99.3 6.2E-12 2.1E-16 99.5 6.9 57 57-113 15-79 (112)
17 2lgw_A DNAJ homolog subfamily 99.2 1.3E-11 4.5E-16 96.1 6.7 52 62-113 2-62 (99)
18 1iur_A KIAA0730 protein; DNAJ 99.2 4.1E-12 1.4E-16 97.5 3.2 53 58-110 12-73 (88)
19 2qsa_A DNAJ homolog DNJ-2; J-d 99.2 1.1E-11 3.7E-16 97.2 5.5 54 60-113 13-78 (109)
20 1bq0_A DNAJ, HSP40; chaperone, 99.2 3.9E-12 1.3E-16 99.0 1.9 54 61-114 2-63 (103)
21 2l6l_A DNAJ homolog subfamily 99.2 1.3E-11 4.4E-16 102.2 5.1 56 57-112 5-74 (155)
22 3apq_A DNAJ homolog subfamily 99.1 4.4E-11 1.5E-15 100.8 5.3 53 62-114 2-62 (210)
23 3lz8_A Putative chaperone DNAJ 99.1 6.2E-12 2.1E-16 116.6 0.0 54 57-110 23-83 (329)
24 2qwo_B Putative tyrosine-prote 99.1 3.4E-11 1.2E-15 93.5 4.0 47 62-108 33-90 (92)
25 1gh6_A Large T antigen; tumor 99.1 2.4E-11 8.3E-16 97.3 1.5 56 60-115 6-67 (114)
26 2pf4_E Small T antigen; PP2A, 99.0 3.5E-11 1.2E-15 103.1 0.8 57 59-115 8-70 (174)
27 1n4c_A Auxilin; four helix bun 99.0 4.4E-10 1.5E-14 97.0 5.0 50 62-111 117-177 (182)
28 3hho_A CO-chaperone protein HS 98.9 8.9E-10 3.1E-14 93.6 6.0 51 61-111 3-68 (174)
29 3ag7_A Putative uncharacterize 98.9 5.3E-10 1.8E-14 88.4 4.3 47 61-108 40-101 (106)
30 1fpo_A HSC20, chaperone protei 98.8 2.1E-09 7E-14 91.2 5.2 49 63-111 2-65 (171)
31 2guz_B Mitochondrial import in 98.8 3.1E-09 1E-13 77.6 4.0 51 59-109 1-58 (65)
32 3bvo_A CO-chaperone protein HS 98.8 6.4E-09 2.2E-13 90.8 6.7 51 61-111 42-107 (207)
33 3apo_A DNAJ homolog subfamily 98.7 2.8E-09 9.5E-14 105.8 1.5 56 59-114 18-81 (780)
34 3uo3_A J-type CO-chaperone JAC 98.7 2E-08 6.9E-13 86.0 5.4 57 57-113 6-74 (181)
35 2y4t_A DNAJ homolog subfamily 97.2 0.00024 8.1E-09 62.6 4.0 51 62-112 382-443 (450)
36 2pzi_A Probable serine/threoni 91.4 0.1 3.5E-06 50.9 3.2 46 61-106 628-675 (681)
37 1kae_A HDH, histidinol dehydro 42.8 24 0.00082 33.9 4.6 37 74-118 68-104 (434)
38 4gic_A HDH, histidinol dehydro 40.9 22 0.00077 34.0 4.1 37 74-118 74-110 (423)
39 4dnd_A Syntaxin-10, SYN10; str 36.5 21 0.00071 28.6 2.7 32 52-90 16-47 (130)
40 2dpo_A L-gulonate 3-dehydrogen 29.4 80 0.0027 28.2 5.6 56 62-117 260-315 (319)
41 2gqb_A Conserved hypothetical 27.0 76 0.0026 25.7 4.5 52 62-120 71-124 (130)
42 2nsa_A Trigger factor, TF; cha 26.8 1.1E+02 0.0038 24.1 5.6 25 73-97 108-132 (170)
43 3vem_A Helicase protein MOM1; 26.0 60 0.002 25.8 3.6 15 96-110 69-83 (115)
44 3uun_A Dystrophin; triple heli 24.9 1.7E+02 0.0059 20.8 5.9 38 77-115 60-104 (119)
45 1qqr_A Streptokinase domain B; 23.1 63 0.0022 26.4 3.3 38 56-93 26-63 (138)
46 4gmn_B 60S ribosomal protein L 21.8 50 0.0017 22.5 2.1 27 101-127 9-35 (49)
47 2pjw_H Uncharacterized protein 20.4 37 0.0013 25.7 1.3 39 74-112 32-87 (88)
No 1
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=6e-14 Score=107.25 Aligned_cols=52 Identities=21% Similarity=0.199 Sum_probs=46.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-------hhHHHHHHHHHHHHhHH
Q 025418 60 KVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-------RSEESIEAAFEKLLMTS 111 (253)
Q Consensus 60 ~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~-------~~~~~IeaAYD~Ilm~~ 111 (253)
...|||++|||+++|+.+|||+||++|+++||||+ +++.+|++||+.|....
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~ 83 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNI 83 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcc
Confidence 45899999999999999999999999999999995 37899999999985443
No 2
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.42 E-value=7.8e-14 Score=106.24 Aligned_cols=56 Identities=20% Similarity=0.177 Sum_probs=49.8
Q ss_pred CCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------------hhHHHHHHHHHHHHhHH
Q 025418 56 FSRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------------RSEESIEAAFEKLLMTS 111 (253)
Q Consensus 56 fp~~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~--------------~~~~~IeaAYD~Ilm~~ 111 (253)
...|...|+|++|||+++|+.+|||+||++|+++||||. +.+.+|++||+.|....
T Consensus 10 ~~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~ 79 (94)
T 1wjz_A 10 LEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEE 79 (94)
T ss_dssp CSSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSS
T ss_pred cccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHH
Confidence 345788999999999999999999999999999999997 46889999999985443
No 3
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=4.9e-13 Score=98.92 Aligned_cols=55 Identities=25% Similarity=0.225 Sum_probs=48.8
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------hhHHHHHHHHHHHHhHHHh
Q 025418 59 IKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------RSEESIEAAFEKLLMTSFR 113 (253)
Q Consensus 59 ~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~--------~~~~~IeaAYD~Ilm~~l~ 113 (253)
++..|+|++|||+++|+.+||++||++|+++||||. +.+.+|++||+.|.....|
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R 66 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKR 66 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHH
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHH
Confidence 567899999999999999999999999999999993 4688999999999655443
No 4
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.40 E-value=8.2e-13 Score=100.16 Aligned_cols=55 Identities=27% Similarity=0.324 Sum_probs=48.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-------hhHHHHHHHHHHHHhHHHhh
Q 025418 60 KVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-------RSEESIEAAFEKLLMTSFRR 114 (253)
Q Consensus 60 ~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~-------~~~~~IeaAYD~Ilm~~l~~ 114 (253)
...|||++|||+++|+.+||++||++|+++||||. +.+.+|++||+.|.....|+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 76 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRT 76 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHH
Confidence 46799999999999999999999999999999995 57889999999996654443
No 5
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=3.7e-13 Score=104.25 Aligned_cols=61 Identities=18% Similarity=0.116 Sum_probs=52.2
Q ss_pred CCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------hhHHHHHHHHHHHHhHHHhh
Q 025418 54 PTFSRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------RSEESIEAAFEKLLMTSFRR 114 (253)
Q Consensus 54 ~~fp~~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~--------~~~~~IeaAYD~Ilm~~l~~ 114 (253)
+--.+|+..|+|++|||+++|+.+|||+||++|+++||||. +.+.+|++||+.|.....|+
T Consensus 9 ~~~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 77 (99)
T 2yua_A 9 QGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRR 77 (99)
T ss_dssp CCCCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHH
T ss_pred CCCCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 33446788999999999999999999999999999999995 37889999999986555443
No 6
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.5e-13 Score=100.84 Aligned_cols=56 Identities=7% Similarity=0.048 Sum_probs=50.0
Q ss_pred CCCCCCCcccccCCCC-CCCHHHHHHHHHHHHHHhCCC----hhhHHHHHHHHHHHHhHHH
Q 025418 57 SRIKVWDPYKRLGISP-YASEEEIWGSRNFLLEQYTGH----ERSEESIEAAFEKLLMTSF 112 (253)
Q Consensus 57 p~~~~~dPY~~LGVs~-~AS~eEIk~A~~~L~~~y~~D----~~~~~~IeaAYD~Ilm~~l 112 (253)
+.|+.+|+|++|||++ +||.+||++||++|+.+|||| ++.+.+|++|||.|....+
T Consensus 9 ~~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~ 69 (71)
T 2guz_A 9 PKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGI 69 (71)
T ss_dssp SSCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhh
Confidence 4588899999999999 799999999999999999987 4689999999999965543
No 7
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=4.2e-13 Score=99.25 Aligned_cols=54 Identities=22% Similarity=0.190 Sum_probs=48.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-------hhHHHHHHHHHHHHhHHH
Q 025418 59 IKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-------RSEESIEAAFEKLLMTSF 112 (253)
Q Consensus 59 ~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~-------~~~~~IeaAYD~Ilm~~l 112 (253)
++..|||++|||+++|+.+||++||++|+++||||. +.+.+|++||+.|.....
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~ 64 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEK 64 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHH
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHH
Confidence 567899999999999999999999999999999995 478899999999855443
No 8
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=6.5e-13 Score=100.72 Aligned_cols=55 Identities=25% Similarity=0.208 Sum_probs=48.5
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-------hhHHHHHHHHHHHHhHHHh
Q 025418 59 IKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-------RSEESIEAAFEKLLMTSFR 113 (253)
Q Consensus 59 ~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~-------~~~~~IeaAYD~Ilm~~l~ 113 (253)
++..|+|++|||+++|+.+||++||++|+++||||. +.+.+|++||+.|.....|
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R 65 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRR 65 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHH
Confidence 467899999999999999999999999999999994 4788999999999655433
No 9
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.35 E-value=8.5e-13 Score=97.34 Aligned_cols=53 Identities=26% Similarity=0.241 Sum_probs=46.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-------hhHHHHHHHHHHHHhHHHh
Q 025418 61 VWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-------RSEESIEAAFEKLLMTSFR 113 (253)
Q Consensus 61 ~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~-------~~~~~IeaAYD~Ilm~~l~ 113 (253)
..|||++|||+++||.+||++||++|+++||||. +.+.+|++||+.|.....|
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R 61 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKR 61 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHH
Confidence 4799999999999999999999999999999995 5788999999998554433
No 10
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.34 E-value=1.3e-12 Score=95.61 Aligned_cols=52 Identities=23% Similarity=0.268 Sum_probs=46.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-----hhHHHHHHHHHHHHhHH
Q 025418 60 KVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-----RSEESIEAAFEKLLMTS 111 (253)
Q Consensus 60 ~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~-----~~~~~IeaAYD~Ilm~~ 111 (253)
...|+|++|||+++||.+||++||++|+++||||. +.+.+|++||+.|....
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~ 62 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEK 62 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHH
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHH
Confidence 45799999999999999999999999999999984 67899999999885444
No 11
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=1e-12 Score=97.89 Aligned_cols=51 Identities=24% Similarity=0.230 Sum_probs=45.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh---------hhHHHHHHHHHHHHhH
Q 025418 60 KVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE---------RSEESIEAAFEKLLMT 110 (253)
Q Consensus 60 ~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~---------~~~~~IeaAYD~Ilm~ 110 (253)
...|+|++|||+++|+.+||++||++|+++||||. +.+.+|++||+.|...
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~ 66 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDA 66 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSST
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCH
Confidence 46899999999999999999999999999999994 2688999999998544
No 12
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.31 E-value=1.8e-12 Score=99.16 Aligned_cols=53 Identities=28% Similarity=0.303 Sum_probs=47.5
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-----hhHHHHHHHHHHHHhHH
Q 025418 59 IKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-----RSEESIEAAFEKLLMTS 111 (253)
Q Consensus 59 ~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~-----~~~~~IeaAYD~Ilm~~ 111 (253)
+...|+|++|||+++|+.+||++||++|+++||||. +.+.+|++||+.|....
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~ 62 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQ 62 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHH
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHH
Confidence 366899999999999999999999999999999985 57899999999985544
No 13
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.28 E-value=7.7e-12 Score=98.59 Aligned_cols=56 Identities=21% Similarity=0.176 Sum_probs=48.8
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------hhHHHHHHHHHHHHhHHHhh
Q 025418 59 IKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------RSEESIEAAFEKLLMTSFRR 114 (253)
Q Consensus 59 ~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~--------~~~~~IeaAYD~Ilm~~l~~ 114 (253)
++..|||++|||+++|+.+|||+||++|+++||||. +.+.+|++||+.|.....|+
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~ 77 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRN 77 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 457899999999999999999999999999999984 36789999999996554443
No 14
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=3.9e-12 Score=96.85 Aligned_cols=54 Identities=22% Similarity=0.244 Sum_probs=47.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh---------hhHHHHHHHHHHHHhHHHh
Q 025418 60 KVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE---------RSEESIEAAFEKLLMTSFR 113 (253)
Q Consensus 60 ~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~---------~~~~~IeaAYD~Ilm~~l~ 113 (253)
...|+|++|||+++|+.+||++||++|+++||||. +.+.+|++||+.|.....|
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R 69 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR 69 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 45799999999999999999999999999999994 3688999999999655443
No 15
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.27 E-value=1.8e-12 Score=97.21 Aligned_cols=55 Identities=2% Similarity=-0.085 Sum_probs=48.0
Q ss_pred CCCCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCh----hhHHHHHHHHHHHHhHHHh
Q 025418 59 IKVWDPYKRLGISPY--ASEEEIWGSRNFLLEQYTGHE----RSEESIEAAFEKLLMTSFR 113 (253)
Q Consensus 59 ~~~~dPY~~LGVs~~--AS~eEIk~A~~~L~~~y~~D~----~~~~~IeaAYD~Ilm~~l~ 113 (253)
.+.+++|++|||+++ ||.+|||+||++|+.+||||. +++.+|++||+.|...-.+
T Consensus 8 ~~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r 68 (79)
T 1faf_A 8 ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYN 68 (79)
T ss_dssp HHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHH
Confidence 455789999999999 999999999999999999884 6899999999998544333
No 16
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=6.2e-12 Score=99.46 Aligned_cols=57 Identities=19% Similarity=0.119 Sum_probs=49.4
Q ss_pred CCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------hhHHHHHHHHHHHHhHHHh
Q 025418 57 SRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------RSEESIEAAFEKLLMTSFR 113 (253)
Q Consensus 57 p~~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~--------~~~~~IeaAYD~Ilm~~l~ 113 (253)
..++..|+|++|||+++|+.+|||+||++|+++||||+ +.+.+|++||+.|.....|
T Consensus 15 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R 79 (112)
T 2ctq_A 15 RSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESR 79 (112)
T ss_dssp CCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHH
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHH
Confidence 34567899999999999999999999999999999984 4688999999999655433
No 17
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.23 E-value=1.3e-11 Score=96.07 Aligned_cols=52 Identities=19% Similarity=0.158 Sum_probs=46.2
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh---------hhHHHHHHHHHHHHhHHHh
Q 025418 62 WDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE---------RSEESIEAAFEKLLMTSFR 113 (253)
Q Consensus 62 ~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~---------~~~~~IeaAYD~Ilm~~l~ 113 (253)
.|+|++|||+++||.+|||+||++|+++||||. +.+.+|++||+.|.....|
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R 62 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKR 62 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 689999999999999999999999999999994 3688999999999655443
No 18
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.22 E-value=4.1e-12 Score=97.46 Aligned_cols=53 Identities=8% Similarity=-0.074 Sum_probs=47.4
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh---------hhHHHHHHHHHHHHhH
Q 025418 58 RIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE---------RSEESIEAAFEKLLMT 110 (253)
Q Consensus 58 ~~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~---------~~~~~IeaAYD~Ilm~ 110 (253)
.++.+|.|++|||+++||.+|||+||++|+.+||||. +++.+|++||+.|...
T Consensus 12 ~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~ 73 (88)
T 1iur_A 12 GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQ 73 (88)
T ss_dssp SSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence 3667899999999999999999999999999999983 4688999999998543
No 19
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.21 E-value=1.1e-11 Score=97.25 Aligned_cols=54 Identities=13% Similarity=0.112 Sum_probs=47.5
Q ss_pred CCCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCh-----------hhHHHHHHHHHHHHhHHHh
Q 025418 60 KVWDPYKRLGISPYA-SEEEIWGSRNFLLEQYTGHE-----------RSEESIEAAFEKLLMTSFR 113 (253)
Q Consensus 60 ~~~dPY~~LGVs~~A-S~eEIk~A~~~L~~~y~~D~-----------~~~~~IeaAYD~Ilm~~l~ 113 (253)
...|||++|||+++| |.+||++||++|+++||||. +.+.+|++||+.|.....|
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R 78 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAK 78 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHH
Confidence 368999999999999 99999999999999999993 4688999999999655433
No 20
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.19 E-value=3.9e-12 Score=98.97 Aligned_cols=54 Identities=30% Similarity=0.300 Sum_probs=47.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------hhHHHHHHHHHHHHhHHHhh
Q 025418 61 VWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------RSEESIEAAFEKLLMTSFRR 114 (253)
Q Consensus 61 ~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~--------~~~~~IeaAYD~Ilm~~l~~ 114 (253)
..|+|++|||+++||.+|||+||++|+++||||. +++.+|++||+.|.....|+
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 63 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 4799999999999999999999999999999995 36789999999996554433
No 21
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.19 E-value=1.3e-11 Score=102.18 Aligned_cols=56 Identities=20% Similarity=0.179 Sum_probs=49.0
Q ss_pred CCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------------hhHHHHHHHHHHHHhHHH
Q 025418 57 SRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------------RSEESIEAAFEKLLMTSF 112 (253)
Q Consensus 57 p~~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~--------------~~~~~IeaAYD~Ilm~~l 112 (253)
+++...|||++|||+++|+.+|||+||++|.++||||+ +.+.+|++||+.|.....
T Consensus 5 ~~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~ 74 (155)
T 2l6l_A 5 EQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEET 74 (155)
T ss_dssp CCCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHH
T ss_pred ccCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 34677899999999999999999999999999999984 467899999999854443
No 22
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.12 E-value=4.4e-11 Score=100.80 Aligned_cols=53 Identities=26% Similarity=0.242 Sum_probs=46.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCChh--------hHHHHHHHHHHHHhHHHhh
Q 025418 62 WDPYKRLGISPYASEEEIWGSRNFLLEQYTGHER--------SEESIEAAFEKLLMTSFRR 114 (253)
Q Consensus 62 ~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~~--------~~~~IeaAYD~Ilm~~l~~ 114 (253)
+|||++|||+++||.+|||+||++|+++||||+. ++.+|++||+.|.....|+
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~ 62 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHH
Confidence 6899999999999999999999999999999853 6889999999986555443
No 23
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.12 E-value=6.2e-12 Score=116.56 Aligned_cols=54 Identities=20% Similarity=0.241 Sum_probs=0.0
Q ss_pred CCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-------hhHHHHHHHHHHHHhH
Q 025418 57 SRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-------RSEESIEAAFEKLLMT 110 (253)
Q Consensus 57 p~~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~-------~~~~~IeaAYD~Ilm~ 110 (253)
..|+.+|||++|||+++||.+|||+||++|+++||||. +++.+|++|||.|...
T Consensus 23 ~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~ 83 (329)
T 3lz8_A 23 NAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDE 83 (329)
T ss_dssp -------------------------------------------------------------
T ss_pred ccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhh
Confidence 34778999999999999999999999999999999994 4688999999998543
No 24
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.11 E-value=3.4e-11 Score=93.46 Aligned_cols=47 Identities=9% Similarity=0.052 Sum_probs=42.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCChh-----------hHHHHHHHHHHHH
Q 025418 62 WDPYKRLGISPYASEEEIWGSRNFLLEQYTGHER-----------SEESIEAAFEKLL 108 (253)
Q Consensus 62 ~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~~-----------~~~~IeaAYD~Il 108 (253)
++.|++|||+++||.+|||+|||+++.+||||+. +|.+|++|||.+.
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~ 90 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFE 90 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999842 5789999999984
No 25
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.07 E-value=2.4e-11 Score=97.28 Aligned_cols=56 Identities=7% Similarity=0.007 Sum_probs=49.0
Q ss_pred CCCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCh----hhHHHHHHHHHHHHhHHHhhh
Q 025418 60 KVWDPYKRLGISPYASE--EEIWGSRNFLLEQYTGHE----RSEESIEAAFEKLLMTSFRRR 115 (253)
Q Consensus 60 ~~~dPY~~LGVs~~AS~--eEIk~A~~~L~~~y~~D~----~~~~~IeaAYD~Ilm~~l~~R 115 (253)
...|+|++|||+++|+. +|||+||++|+++||||+ +++.+|++||+.|.....|++
T Consensus 6 ~~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~ 67 (114)
T 1gh6_A 6 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAH 67 (114)
T ss_dssp HHHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCC
T ss_pred hhhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHH
Confidence 45689999999999999 999999999999999985 589999999999865555544
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.02 E-value=3.5e-11 Score=103.11 Aligned_cols=57 Identities=7% Similarity=-0.020 Sum_probs=48.2
Q ss_pred CCCCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCh----hhHHHHHHHHHHHHhHHHhhh
Q 025418 59 IKVWDPYKRLGISPYAS--EEEIWGSRNFLLEQYTGHE----RSEESIEAAFEKLLMTSFRRR 115 (253)
Q Consensus 59 ~~~~dPY~~LGVs~~AS--~eEIk~A~~~L~~~y~~D~----~~~~~IeaAYD~Ilm~~l~~R 115 (253)
.+..|+|++|||+++|+ .+|||+||++++++||||+ +++.+|++|||.+.....|++
T Consensus 8 ~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~ 70 (174)
T 2pf4_E 8 EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAH 70 (174)
T ss_dssp HHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHT
T ss_pred cccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 45679999999999999 6999999999999999985 578899999999965544433
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=98.96 E-value=4.4e-10 Score=96.97 Aligned_cols=50 Identities=8% Similarity=0.049 Sum_probs=45.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCChh-----------hHHHHHHHHHHHHhHH
Q 025418 62 WDPYKRLGISPYASEEEIWGSRNFLLEQYTGHER-----------SEESIEAAFEKLLMTS 111 (253)
Q Consensus 62 ~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~~-----------~~~~IeaAYD~Ilm~~ 111 (253)
+|+|++|||+++|+.+|||+||++++.+||||+. .+.+|++||+.+....
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~ 177 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQG 177 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHH
Confidence 6999999999999999999999999999999852 6789999999985443
No 28
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=98.93 E-value=8.9e-10 Score=93.55 Aligned_cols=51 Identities=10% Similarity=0.142 Sum_probs=44.9
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCh-------------hhHHHHHHHHHHHHhHH
Q 025418 61 VWDPYKRLGISPYAS--EEEIWGSRNFLLEQYTGHE-------------RSEESIEAAFEKLLMTS 111 (253)
Q Consensus 61 ~~dPY~~LGVs~~AS--~eEIk~A~~~L~~~y~~D~-------------~~~~~IeaAYD~Ilm~~ 111 (253)
..|||++|||+++++ .+||++||++|.++||||. +.+.+|+.||+.+....
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~ 68 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPL 68 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChH
Confidence 469999999999999 9999999999999999996 35789999999985443
No 29
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=98.93 E-value=5.3e-10 Score=88.35 Aligned_cols=47 Identities=9% Similarity=-0.101 Sum_probs=42.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh---------------hhHHHHHHHHHHHH
Q 025418 61 VWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE---------------RSEESIEAAFEKLL 108 (253)
Q Consensus 61 ~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~---------------~~~~~IeaAYD~Il 108 (253)
+.|+|++||++. ||.+|||+|||+++.+||||+ +++.+|++||+.+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLs 101 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFN 101 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHc
Confidence 479999999996 999999999999999999985 25779999999984
No 30
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=98.85 E-value=2.1e-09 Score=91.17 Aligned_cols=49 Identities=16% Similarity=0.206 Sum_probs=44.0
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCh-------------hhHHHHHHHHHHHHhHH
Q 025418 63 DPYKRLGISPYA--SEEEIWGSRNFLLEQYTGHE-------------RSEESIEAAFEKLLMTS 111 (253)
Q Consensus 63 dPY~~LGVs~~A--S~eEIk~A~~~L~~~y~~D~-------------~~~~~IeaAYD~Ilm~~ 111 (253)
|||++|||++++ |.+||++||++|.++||||. +.+.+|+.||+.+....
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~ 65 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPL 65 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 799999999999 99999999999999999995 25789999999985443
No 31
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.80 E-value=3.1e-09 Score=77.63 Aligned_cols=51 Identities=20% Similarity=0.192 Sum_probs=45.5
Q ss_pred CCCCCcccccCCCCC---CCHHHHHHHHHHHHHHhCCCh----hhHHHHHHHHHHHHh
Q 025418 59 IKVWDPYKRLGISPY---ASEEEIWGSRNFLLEQYTGHE----RSEESIEAAFEKLLM 109 (253)
Q Consensus 59 ~~~~dPY~~LGVs~~---AS~eEIk~A~~~L~~~y~~D~----~~~~~IeaAYD~Ilm 109 (253)
|+.++.|++|||+++ ++.|||+++|++|..++|||+ -...+|+.|+|.+..
T Consensus 1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 456778999999999 999999999999999999885 358899999999854
No 32
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=98.80 E-value=6.4e-09 Score=90.83 Aligned_cols=51 Identities=10% Similarity=0.045 Sum_probs=44.2
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCChh-------------hHHHHHHHHHHHHhHH
Q 025418 61 VWDPYKRLGISPY--ASEEEIWGSRNFLLEQYTGHER-------------SEESIEAAFEKLLMTS 111 (253)
Q Consensus 61 ~~dPY~~LGVs~~--AS~eEIk~A~~~L~~~y~~D~~-------------~~~~IeaAYD~Ilm~~ 111 (253)
..|+|++|||+++ ++.+||++||++|.++||||.. ++.+|+.||+.+....
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~ 107 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPL 107 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
Confidence 4689999999997 7999999999999999999952 3579999999985443
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.70 E-value=2.8e-09 Score=105.78 Aligned_cols=56 Identities=25% Similarity=0.201 Sum_probs=32.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCChh--------hHHHHHHHHHHHHhHHHhh
Q 025418 59 IKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHER--------SEESIEAAFEKLLMTSFRR 114 (253)
Q Consensus 59 ~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~~--------~~~~IeaAYD~Ilm~~l~~ 114 (253)
....|||++|||+++||.+|||+|||+|+++||||+. ++.+|++||+.|.....|+
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~ 81 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 81 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHH
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHH
Confidence 3568999999999999999999999999999999964 5779999999996665444
No 34
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=98.66 E-value=2e-08 Score=86.00 Aligned_cols=57 Identities=12% Similarity=0.052 Sum_probs=47.1
Q ss_pred CCCCCCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCh-----hhHHHHHHHHHHHHhHHHh
Q 025418 57 SRIKVWDPYKRL------GISP-YASEEEIWGSRNFLLEQYTGHE-----RSEESIEAAFEKLLMTSFR 113 (253)
Q Consensus 57 p~~~~~dPY~~L------GVs~-~AS~eEIk~A~~~L~~~y~~D~-----~~~~~IeaAYD~Ilm~~l~ 113 (253)
++....|+|++| |+.+ +||.+||++||++|.++||||. +.+.+|++||+.+.....|
T Consensus 6 ~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R 74 (181)
T 3uo3_A 6 QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRR 74 (181)
T ss_dssp -CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHH
T ss_pred CCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHH
Confidence 344568999999 4665 9999999999999999999996 4788999999998554433
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.17 E-value=0.00024 Score=62.58 Aligned_cols=51 Identities=29% Similarity=0.247 Sum_probs=43.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-----------hhHHHHHHHHHHHHhHHH
Q 025418 62 WDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-----------RSEESIEAAFEKLLMTSF 112 (253)
Q Consensus 62 ~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~-----------~~~~~IeaAYD~Ilm~~l 112 (253)
.|.|+.||+.++++.+||+++|+++..++|||. +++.+|.+||+.+.....
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~ 443 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEM 443 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGG
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 488999999999999999999999999999873 267799999999854433
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=91.39 E-value=0.1 Score=50.88 Aligned_cols=46 Identities=11% Similarity=-0.061 Sum_probs=39.0
Q ss_pred CCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCChhhHHHHHHHHHH
Q 025418 61 VWDPYKRLGISPYASE--EEIWGSRNFLLEQYTGHERSEESIEAAFEK 106 (253)
Q Consensus 61 ~~dPY~~LGVs~~AS~--eEIk~A~~~L~~~y~~D~~~~~~IeaAYD~ 106 (253)
..|+|++||++-++.. .+|++|||+++++.++|+++.+-|+.|+..
T Consensus 628 ~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~~~r~~lvd~a~~v 675 (681)
T 2pzi_A 628 KASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQRHRYTLVDMANKV 675 (681)
T ss_dssp CCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCChHHHHHHHHHhccc
Confidence 3459999999877777 789999999999999998888888888753
No 37
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=42.79 E-value=24 Score=33.91 Aligned_cols=37 Identities=22% Similarity=0.342 Sum_probs=31.2
Q ss_pred CCHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHhHHHhhhhhc
Q 025418 74 ASEEEIWGSRNFLLEQYTGHERSEESIEAAFEKLLMTSFRRRKKE 118 (253)
Q Consensus 74 AS~eEIk~A~~~L~~~y~~D~~~~~~IeaAYD~Ilm~~l~~R~~G 118 (253)
-|.|||++||.++ |++..+.|+.|++.| .++.++|+.
T Consensus 68 Vs~~ei~~A~~~~------~~~~~~ai~~A~~nI--~~fH~~Q~~ 104 (434)
T 1kae_A 68 VSAEEIAAASERL------SDELKQAMAVAVKNI--ETFHTAQKL 104 (434)
T ss_dssp CCHHHHHHHHHHS------CHHHHHHHHHHHHHH--HHHHHTTCC
T ss_pred cCHHHHHHHHHhC------CHHHHHHHHHHHHHH--HHHHHHhcC
Confidence 4789999999877 888899999999999 677777754
No 38
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=40.92 E-value=22 Score=33.97 Aligned_cols=37 Identities=14% Similarity=0.253 Sum_probs=29.9
Q ss_pred CCHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHhHHHhhhhhc
Q 025418 74 ASEEEIWGSRNFLLEQYTGHERSEESIEAAFEKLLMTSFRRRKKE 118 (253)
Q Consensus 74 AS~eEIk~A~~~L~~~y~~D~~~~~~IeaAYD~Ilm~~l~~R~~G 118 (253)
-|.|||++|++++ |++..+.|+.||+.| .++.++|+-
T Consensus 74 vs~~ei~~A~~~l------~~~~~~ai~~A~~~I--~~fh~~Q~~ 110 (423)
T 4gic_A 74 LPRDVLEAAWQAL------PAEQAKALREAAERI--RAYAERQKL 110 (423)
T ss_dssp ECHHHHHHHHHTS------CHHHHHHHHHHHHHH--HHHHHHHCC
T ss_pred cCHHHHHHHHhhC------CHHHHHHHHHHHHHH--HHHHHhccc
Confidence 4789999998876 788889999999999 566666653
No 39
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=36.51 E-value=21 Score=28.61 Aligned_cols=32 Identities=19% Similarity=0.217 Sum_probs=14.5
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHh
Q 025418 52 NMPTFSRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQY 90 (253)
Q Consensus 52 ~~~~fp~~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y 90 (253)
..--|-.|+.+|||-.- .+||+++-+++..-|
T Consensus 16 ~~~~~~~ms~~DPF~~V-------k~EVq~sl~~l~~l~ 47 (130)
T 4dnd_A 16 ENLYFQSMSLEDPFFVV-------RGEVQKAVNTARGLY 47 (130)
T ss_dssp -----------CCHHHH-------HHHHHHHHHHHHHHH
T ss_pred cceeeecCCCCCCcHHH-------HHHHHHHHHHHHHHH
Confidence 34556678889999763 578888777665544
No 40
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=29.45 E-value=80 Score=28.15 Aligned_cols=56 Identities=9% Similarity=0.018 Sum_probs=43.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHhHHHhhhhh
Q 025418 62 WDPYKRLGISPYASEEEIWGSRNFLLEQYTGHERSEESIEAAFEKLLMTSFRRRKK 117 (253)
Q Consensus 62 ~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D~~~~~~IeaAYD~Ilm~~l~~R~~ 117 (253)
+++|+.||=.|+-+.|-+.+--....++..+|.+...+.++--|..+|+=++.+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rd~~l~~~~~~~~~ 315 (319)
T 2dpo_A 260 KRVLKSFGSIPEFSGATVEKVNQAMCKKVPADPEHLAARREWRDECLKRLAKLKRQ 315 (319)
T ss_dssp HHHHHTCCCCCCCCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 57889999888888877777666666666777888889999889888876665553
No 41
>2gqb_A Conserved hypothetical protein; hypothetical protein conserved unknown protein, structural genomics, PSI; NMR {Rhodopseudomonas palustris} SCOP: a.282.1.1
Probab=26.97 E-value=76 Score=25.70 Aligned_cols=52 Identities=23% Similarity=0.321 Sum_probs=40.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHH--hCCChhhHHHHHHHHHHHHhHHHhhhhhccc
Q 025418 62 WDPYKRLGISPYASEEEIWGSRNFLLEQ--YTGHERSEESIEAAFEKLLMTSFRRRKKEKI 120 (253)
Q Consensus 62 ~dPY~~LGVs~~AS~eEIk~A~~~L~~~--y~~D~~~~~~IeaAYD~Ilm~~l~~R~~Gki 120 (253)
-|-.+.||++.+ -.+|++|.++ |++|..--++.|-+.-+-+|++|. ..-|++
T Consensus 71 VDLmKlLglDsS------l~~RkeLA~eL~~~~~~~dSA~mNiwLHk~vm~kLa-~NGGkv 124 (130)
T 2gqb_A 71 VDLMKALDIDSS------LSARKELAKELGYSGDMNDSASMNIWLHKQVMSKLV-ANGGKL 124 (130)
T ss_dssp HHHHHHTCCCCS------HHHHHHHHHHHTCCCSSCHHHHHHHHHHHHHHHHHG-GGSEEC
T ss_pred HHHHHHhCCCcc------HHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHH-HhCCCC
Confidence 377889999765 3578889888 568888888999888888899998 334554
No 42
>2nsa_A Trigger factor, TF; chaperone; 1.70A {Thermotoga maritima}
Probab=26.78 E-value=1.1e+02 Score=24.09 Aligned_cols=25 Identities=12% Similarity=0.003 Sum_probs=19.2
Q ss_pred CCCHHHHHHHHHHHHHHhCCChhhH
Q 025418 73 YASEEEIWGSRNFLLEQYTGHERSE 97 (253)
Q Consensus 73 ~AS~eEIk~A~~~L~~~y~~D~~~~ 97 (253)
.+|++||.+...+++++|+-+++.+
T Consensus 108 ~vsdeev~~~i~~~A~~y~~~~~~~ 132 (170)
T 2nsa_A 108 SVNDEELEKEAEELAPFWGISPDRA 132 (170)
T ss_dssp CCCHHHHHHHHHHHHHHHTSCHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCHHHH
Confidence 4678888888888888888766553
No 43
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=26.01 E-value=60 Score=25.82 Aligned_cols=15 Identities=13% Similarity=0.315 Sum_probs=10.6
Q ss_pred hHHHHHHHHHHHHhH
Q 025418 96 SEESIEAAFEKLLMT 110 (253)
Q Consensus 96 ~~~~IeaAYD~Ilm~ 110 (253)
.++++-.=||..+.+
T Consensus 69 E~ae~k~KYD~~lqe 83 (115)
T 3vem_A 69 KMAEVQAEFRRKFHE 83 (115)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 466777778877664
No 44
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=24.93 E-value=1.7e+02 Score=20.79 Aligned_cols=38 Identities=13% Similarity=0.049 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHhCCChh-------hHHHHHHHHHHHHhHHHhhh
Q 025418 77 EEIWGSRNFLLEQYTGHER-------SEESIEAAFEKLLMTSFRRR 115 (253)
Q Consensus 77 eEIk~A~~~L~~~y~~D~~-------~~~~IeaAYD~Ilm~~l~~R 115 (253)
+.|.+.-+.|+...|.+++ +...++..|+.+ .+....|
T Consensus 60 ~~~~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~rw~~L-~~~~~~R 104 (119)
T 3uun_A 60 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECL-RVASMEK 104 (119)
T ss_dssp HHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 3444444555555554432 355677777776 3444444
No 45
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=23.13 E-value=63 Score=26.43 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=31.7
Q ss_pred CCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCC
Q 025418 56 FSRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGH 93 (253)
Q Consensus 56 fp~~~~~dPY~~LGVs~~AS~eEIk~A~~~L~~~y~~D 93 (253)
.|.....-.+++|-|...-+.+|++++-..++.|+|||
T Consensus 26 ~P~~~~~~~l~~k~ig~~Its~eL~~~AqeiL~q~hp~ 63 (138)
T 1qqr_A 26 RPGLKLTKLLKTLAIGDTITSQELLAQAQSILNKNHPG 63 (138)
T ss_dssp CTTBCCCEEEEEECTTCEEEHHHHHHHHHHHHHHHSTT
T ss_pred ccchhhhhhhcccccCcccCHHHHHHHHHHHHHhcCCC
Confidence 34443334589999999999999999999999999998
No 46
>4gmn_B 60S ribosomal protein L5-like protein; ARM, heat, solenoid, linear motif, nuclear transport, chaper ribosome assembly, RPL11, KAP104; 2.95A {Chaetomium thermophilum}
Probab=21.79 E-value=50 Score=22.47 Aligned_cols=27 Identities=26% Similarity=0.493 Sum_probs=21.6
Q ss_pred HHHHHHHHhHHHhhhhhcccchhhhhh
Q 025418 101 EAAFEKLLMTSFRRRKKEKINLKSRLK 127 (253)
Q Consensus 101 eaAYD~Ilm~~l~~R~~Gki~v~~~ir 127 (253)
+.||=.=..-++++|++||.+--.+.|
T Consensus 9 nkaYfkRyQvkfRRRREGKTDYyaRkr 35 (49)
T 4gmn_B 9 NSAYYSRFQTKFKRRRQGKTDYYARKR 35 (49)
T ss_pred hHHHHHHHhhHHhhhhcccchHHHHHH
Confidence 578888888899999999987655444
No 47
>2pjw_H Uncharacterized protein YHL002W; GAT domain, core complex, doamin SWAP, endocytosis/exocytosis complex; 3.01A {Saccharomyces cerevisiae}
Probab=20.44 E-value=37 Score=25.67 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=27.1
Q ss_pred CCHHHHHHHHH----------HHHHHhCCC-------hhhHHHHHHHHHHHHhHHH
Q 025418 74 ASEEEIWGSRN----------FLLEQYTGH-------ERSEESIEAAFEKLLMTSF 112 (253)
Q Consensus 74 AS~eEIk~A~~----------~L~~~y~~D-------~~~~~~IeaAYD~Ilm~~l 112 (253)
+.++||++-|+ +++.+|.-- .+++..+++.||.++.+++
T Consensus 32 ~~d~eiq~LY~~v~~lRPkL~~li~kysqKk~eL~~Ln~kl~~a~~~Yd~lle~s~ 87 (88)
T 2pjw_H 32 LQDPHIGDMYGSVTPLRPQVTRMLGKYAKEKEDMLSLRQVLANAERSYNQLMDRAA 87 (88)
T ss_dssp HSCHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56789998887 455666432 2467788899999865543
Done!