BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025419
MLPRLSSVLRTLPSSTAPMARIISRATPLPLTRTSSAAISFLNSPSISFKTHRLDASSPS
KSSSLFGRGFRVLCRREEESVVRSSRKVFAEQRGYRKVRRRVAKSKQKELELNVSICIED
ELPDDPEVLNFAEMLRVNAPTLMKLAFDSLKDSTYKTRDTAIEDAGGFESIELSILFCNN
EFIRKHNKEWRDEDHATDVLYMSQHVPELKLPLVFSLCHAKYCVSAYSGVWGGVEKIVLE
RHLSVQYFLFSLC

High Scoring Gene Products

Symbol, full name Information P value
AT2G25870 protein from Arabidopsis thaliana 2.4e-44

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025419
        (253 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2043535 - symbol:AT2G25870 species:3702 "Arabi...   467  2.4e-44   1


>TAIR|locus:2043535 [details] [associations]
            symbol:AT2G25870 species:3702 "Arabidopsis thaliana"
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0004222
            "metalloendopeptidase activity" evidence=IEA] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0016311 "dephosphorylation"
            evidence=IBA] [GO:0016787 "hydrolase activity" evidence=IEA;ISS]
            [GO:0016791 "phosphatase activity" evidence=IBA] [GO:0046872 "metal
            ion binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
            HAMAP:MF_00009 InterPro:IPR000150 InterPro:IPR002036
            InterPro:IPR006379 InterPro:IPR023091 Pfam:PF02130 PROSITE:PS01228
            InterPro:IPR020549 GO:GO:0009507 EMBL:CP002685 GO:GO:0046872
            Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
            GO:GO:0004222 GO:GO:0016791 Pfam:PF08282 TIGRFAMs:TIGR00099
            TIGRFAMs:TIGR01484 Gene3D:3.40.390.30 TIGRFAMs:TIGR00043
            PROSITE:PS01306 EMBL:AY099804 EMBL:BT030369 EMBL:AK118762
            IPI:IPI00531880 RefSeq:NP_850072.1 UniGene:At.38966 HSSP:O67367
            ProteinModelPortal:Q8L5Z4 SMR:Q8L5Z4 PRIDE:Q8L5Z4
            EnsemblPlants:AT2G25870.1 GeneID:817128 KEGG:ath:AT2G25870
            TAIR:At2g25870 HOGENOM:HOG000238920 InParanoid:Q8L5Z4 OMA:LIQSAYD
            PhylomeDB:Q8L5Z4 ProtClustDB:PLN02887 Genevestigator:Q8L5Z4
            Uniprot:Q8L5Z4
        Length = 584

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 110/216 (50%), Positives = 136/216 (62%)

Query:     1 MLPRLSSVLRTLPSSTAPMARIISRATPLPLTRTSSAAISFLNSPSISFKTHRLDAXXXX 60
             ML R+   LR     +A  AR + RAT L L         F +SP  +   +RLD     
Sbjct:     1 MLSRVCPTLRYNRIWSAH-AREMPRATLLLLQPNF-----FHSSPKTAL-VNRLDVTSSE 53

Query:    61 XXXXLFGRGFXXXXXXXXXXXXXXX--XKVFAEQRGYRKVRRRVAKSKQKELELNVSICI 118
                 +F R F                  +VFAE+R YRK+RRR  K KQ ELEL+VSICI
Sbjct:    54 FSS-MFRRSFHALRSTVGDWRKLPKPPGQVFAERREYRKIRRRAPKKKQ-ELELSVSICI 111

Query:   119 EDELPDDPEVLNFAEMLRVNAPTLMKLAFDSLKDSTYKTRDTAIEDAGGFESIELSILFC 178
             E++LPDD E+ N AEMLR+N P  M LAF+ LKDS YKTR+T IED GG+E++ELS++ C
Sbjct:   112 EEQLPDDLEIQNIAEMLRLNVPMAMTLAFNGLKDSKYKTRETDIEDLGGYETVELSVMLC 171

Query:   179 NNEFIRKHNKEWRDEDHATDVLYMSQHVPELKLPLV 214
             N++FI K NKEWR EDHATDVL MSQHVPELKLP++
Sbjct:   172 NDDFICKLNKEWRGEDHATDVLSMSQHVPELKLPVL 207


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      253       229   0.00082  113 3  11 22  0.36    33
                                                     32  0.42    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  174 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.62u 0.12s 18.74t   Elapsed:  00:00:01
  Total cpu time:  18.62u 0.12s 18.74t   Elapsed:  00:00:01
  Start:  Fri May 10 08:11:29 2013   End:  Fri May 10 08:11:30 2013

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