BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025421
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum
lycopersicum GN=CAP10B PE=3 SV=1
Length = 256
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/256 (82%), Positives = 234/256 (91%), Gaps = 3/256 (1%)
Query: 1 MAAATSGAVLNGLGSSFINGGKKSQALLAG--TNRVTSSKK-SVVVAALPPKKSWIPAVK 57
M ++ AVLNGL SSF+ GGKK+QALL T RVT+ K+ V AA+ PKKSWIPAVK
Sbjct: 1 MTTTSATAVLNGLSSSFLTGGKKTQALLGAHVTARVTTPKRFVVAAAAVAPKKSWIPAVK 60
Query: 58 GGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW 117
GGNL++PEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAW
Sbjct: 61 SGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120
Query: 118 SGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 177
SGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+TA
Sbjct: 121 SGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTA 180
Query: 178 ENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIF 237
ENFAN TGEQGYPGGKFFDPL LAGT+ +GVY+PDTEKL+RLK+AEIKH+RLAM+AMLIF
Sbjct: 181 ENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIF 240
Query: 238 YFEAGQGKTPLGALGL 253
YFEAGQGKTPLGALGL
Sbjct: 241 YFEAGQGKTPLGALGL 256
>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum
lycopersicum GN=CAP10A PE=3 SV=1
Length = 256
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/255 (83%), Positives = 231/255 (90%), Gaps = 4/255 (1%)
Query: 3 AATSGAVLNGLGSSFINGGKKSQALLAGTN--RV--TSSKKSVVVAALPPKKSWIPAVKG 58
A TS AVLNGL SSF+ GG KSQALLA RV ++ K V A KKSWIPAV+G
Sbjct: 2 ATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRG 61
Query: 59 GGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 118
GGNL++PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAWS
Sbjct: 62 GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS 121
Query: 119 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 178
GIPWFEAGADPGAIAPFSFG+LLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TAE
Sbjct: 122 GIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAE 181
Query: 179 NFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFY 238
NFAN TGEQGYPGGKFFDPL LAGT+ +GVY+PDTEKL+RLKVAEIKHARLAM+AMLIFY
Sbjct: 182 NFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFY 241
Query: 239 FEAGQGKTPLGALGL 253
FEAGQGKTPLGALGL
Sbjct: 242 FEAGQGKTPLGALGL 256
>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia
oleracea PE=2 SV=1
Length = 261
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/261 (81%), Positives = 235/261 (90%), Gaps = 8/261 (3%)
Query: 1 MAAATSG-AVLNGLGSSFINGGKKS-QALLAGTNRV------TSSKKSVVVAALPPKKSW 52
MAAATS A++NG S F++GGKKS Q+LL ++V TS K VV AA PKKSW
Sbjct: 1 MAAATSATAIVNGFTSPFLSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSW 60
Query: 53 IPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF 112
IPAVKGGGN ++PEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIF
Sbjct: 61 IPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIF 120
Query: 113 VGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATP 172
VGQAW+GIPWFEAGADPGA+APFSFG+LLGTQLLLMGWVESKRWVDFF+P+SQSVEWATP
Sbjct: 121 VGQAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATP 180
Query: 173 WSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMV 232
WSRTAENF+N+TGEQGYPGGKFFDPL LAGTI +GVY PDT+KL+RLK+AEIKHARLAM+
Sbjct: 181 WSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAML 240
Query: 233 AMLIFYFEAGQGKTPLGALGL 253
AMLIFYFEAGQGKTPLGALGL
Sbjct: 241 AMLIFYFEAGQGKTPLGALGL 261
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum
lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 120/241 (49%), Gaps = 30/241 (12%)
Query: 6 SGAVLNGLGSSFINGGKKSQALLAGTNRVTSSKKSVVVAALPPKKSWIPAVKGGGNLINP 65
+G+++ +SF+ GG++ + T S +V VAA P + W P P
Sbjct: 23 NGSIVGTTKASFL-GGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGST------PP 75
Query: 66 EWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI----- 120
WLDGSLPGD+GFDPLGL DP L+W ++AEL+H RWAM GIF+ + + I
Sbjct: 76 PWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNT 135
Query: 121 -PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 179
W+ AG +L +L+L+GW E +RW D P + + P N
Sbjct: 136 PSWYTAGEQEYFT---DTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFP------N 186
Query: 180 FANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYF 239
+ GYPGG +FDPL G K+ L+ EIK+ RLAM+A++ +F
Sbjct: 187 NKLTGTDVGYPGGLWFDPL--------GWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWF 238
Query: 240 E 240
+
Sbjct: 239 Q 239
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 69 DGSLPGDYGFDPLGLGK-DPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI----PWF 123
D PG FDPLG G PA +K R E+ +GR AM AV+G + ++G F
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLF 252
Query: 124 EAGADPGAIAPFS 136
ADPG F+
Sbjct: 253 AHLADPGHATIFA 265
>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida
PE=2 SV=1
Length = 270
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 122/245 (49%), Gaps = 30/245 (12%)
Query: 2 AAATSGAVLNGLGSSFINGGKKSQALLAGTNRVTSSKKSVVVAALPPKKSWIPAVKGGGN 61
++ +G+++ +SF+ GGK+ + + S VAA P + W P
Sbjct: 19 SSQKNGSIVGATKASFL-GGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGST---- 73
Query: 62 LINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI- 120
PEWLDGSLPGD+GFDPLGLG DP LKW +AEL+H RWAM GIF+ + + I
Sbjct: 74 --PPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIG 131
Query: 121 -----PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSR 175
W+ AG +L +L+L+GW E +RW D P + + P ++
Sbjct: 132 VLNTPSWYTAGEQEYFT---DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNK 188
Query: 176 TAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAML 235
+ GYPGG +FDPL G K+ L+ EIK+ RLAM+A++
Sbjct: 189 LTGT------DVGYPGGLWFDPL--------GWGSGSPAKIKELRTKEIKNGRLAMLAVM 234
Query: 236 IFYFE 240
+F+
Sbjct: 235 GAWFQ 239
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 69 DGSLPGDYGFDPLGLGK-DPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI----PWF 123
D PG FDPLG G PA +K R E+ +GR AM AV+G + ++G F
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLF 252
Query: 124 EAGADPGAIAPFS 136
ADPG F+
Sbjct: 253 AHLADPGHATIFA 265
>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1
Length = 290
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 111/238 (46%), Gaps = 84/238 (35%)
Query: 63 INPEWLDGSLPGDYGFDPLGLGKDPAFLKW------------------------------ 92
I+P+WLDGSL GDYGFDP GLGK +L++
Sbjct: 63 ISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKST 122
Query: 93 -------------YREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAG--------ADPGA 131
+RE ELIHGRWAM A +G + +G+ W +AG + G
Sbjct: 123 PFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQ 182
Query: 132 IAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPG 191
PFS +L+ ++L++G++E +R N E S ++ YPG
Sbjct: 183 PLPFSISTLIWIEVLVIGYIEFQR-----NAELDS------------------EKRLYPG 219
Query: 192 GKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFE-AGQGKTPL 248
GKFFDPL LA D EK +L++AEIKHARLAMVA L F + A GK PL
Sbjct: 220 GKFFDPLGLAA---------DPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPL 268
>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1
Length = 287
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 120/271 (44%), Gaps = 93/271 (34%)
Query: 30 GTNRVTSSKKSVVVAALPPKKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAF 89
GT + + K V++ P W P K +PE+LDGSL GDYGFDP GLGK +
Sbjct: 36 GTKKASPKKAKTVISDRP---LWFPGAK------SPEYLDGSLVGDYGFDPFGLGKPAEY 86
Query: 90 LKW-------------------------------------------YREAELIHGRWAMA 106
L++ +RE ELIHGRWAM
Sbjct: 87 LQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAML 146
Query: 107 AVVGIFVGQAWSGIPWFEAG--------ADPGAIAPFSFGSLLGTQLLLMGWVESKRWVD 158
A +G + +G+ W +AG + G PFS +L+ ++L++G++E +R
Sbjct: 147 ATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR--- 203
Query: 159 FFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDR 218
N E S ++ YPGGKFFDPL LA D K +
Sbjct: 204 --NAELDS------------------EKRLYPGGKFFDPLGLAS---------DPVKKAQ 234
Query: 219 LKVAEIKHARLAMVAMLIFYFE-AGQGKTPL 248
L++AEIKHARLAMV L F + A GK PL
Sbjct: 235 LQLAEIKHARLAMVGFLGFAVQAAATGKGPL 265
>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1
Length = 276
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 109/239 (45%), Gaps = 85/239 (35%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKW-------------------------------- 92
PEWLDGS+ GD GFDP GLGK +L++
Sbjct: 66 PEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTPF 125
Query: 93 -----------YREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADP--------GAIA 133
+RE ELIHGRWAM +G +A +GI W +AG G
Sbjct: 126 QPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQPL 185
Query: 134 PFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGK 193
PFS +L+ ++L++G++E +R + +PE + YPGG
Sbjct: 186 PFSLTTLIWIEVLVVGYIEFQRNSEL-DPEKRI----------------------YPGG- 221
Query: 194 FFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEAG-QGKTPLGAL 251
+FDPL LA D EKLD LK+AEIKH+RLAMVA LIF +A GK P+ L
Sbjct: 222 YFDPLGLAA---------DPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFL 271
>sp|Q93WD2|CB29_CHLRE Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii
GN=Lhcb4 PE=1 SV=3
Length = 280
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 107/253 (42%), Gaps = 91/253 (35%)
Query: 52 WIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAF---------------------- 89
W+P N PEWLDGSLPGD GFDPLGL K F
Sbjct: 53 WLP------NTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEA 106
Query: 90 -----------------------LKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAG 126
L +RE ELIHGRWAM A +G V +A +G+ W EAG
Sbjct: 107 IVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEAG 166
Query: 127 -------ADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 179
+ G PFS L+ +++L+G E R + NPE +
Sbjct: 167 KVELDGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSE-TNPEKRC------------- 212
Query: 180 FANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYF 239
YPGG FDPL LA D E+ RLK AEIKHARLAMV+ +
Sbjct: 213 ---------YPGG-VFDPLKLASE--------DEERAFRLKTAEIKHARLAMVSFFGYGV 254
Query: 240 EA-GQGKTPLGAL 251
+A G+ LG+L
Sbjct: 255 QALSTGEGALGSL 267
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum
GN=lhcA-P4 PE=1 SV=1
Length = 252
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 116/247 (46%), Gaps = 37/247 (14%)
Query: 12 GLGSSFINGGKKSQALLAGTNRVTSSKKSVVVAALPPKKSWIPAVKGGGNLINPEWLDGS 71
GL S F+ GG + R S K W+P L +P +L GS
Sbjct: 17 GLKSRFL-GGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPG------LASPGYLTGS 69
Query: 72 LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEA 125
LPGD GFDPLGL +DP L+W+ +AEL++GRWAM V G+ + + ++ I W+ A
Sbjct: 70 LPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAA 129
Query: 126 GADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATG 185
G + S +L + +L +VE +RW D NP S + + + ++ G
Sbjct: 130 GKEEYFA---SSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQD------PIFKQYSLPAG 180
Query: 186 EQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEAG-QG 244
E GYPGG F+PL A T++ K EI + RLAM+A L F + G
Sbjct: 181 EVGYPGG-IFNPLNFAPTLEA-------------KEKEIANGRLAMLAFLGFIIQHNVTG 226
Query: 245 KTPLGAL 251
K P L
Sbjct: 227 KGPFDNL 233
>sp|P27521|CA4_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis
thaliana GN=LHCA4 PE=1 SV=1
Length = 251
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 110/225 (48%), Gaps = 36/225 (16%)
Query: 34 VTSSKKSVVVAALPPKKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWY 93
+ SS K+ K W+P L +P++L GSL GD GFDPLGL +DP LKW+
Sbjct: 39 IGSSAKTSSFKVEAKKGEWLPG------LASPDYLTGSLAGDNGFDPLGLAEDPENLKWF 92
Query: 94 REAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLL 147
+AEL++GRWAM V G+ + + ++ I W++AG + S +L + +L
Sbjct: 93 VQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFA---SSSTLFVIEFIL 149
Query: 148 MGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDG 207
+VE +RW D NP S + + + ++ GE GYPGG F+PL A T
Sbjct: 150 FHYVEIRRWQDIKNPGSVNQD------PIFKQYSLPKGEVGYPGG-IFNPLNFAPT---- 198
Query: 208 VYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEAG-QGKTPLGAL 251
K E+ + RLAM+A L F + GK P L
Sbjct: 199 ---------QEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENL 234
>sp|Q01667|CAB6_ARATH Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis
thaliana GN=LHCA1 PE=1 SV=1
Length = 241
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 103/201 (51%), Gaps = 46/201 (22%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWF 123
P +LDGS PGD+GFDPLGLG+ PA L+ Y+E+ELIH RWAM AV GI V +A W
Sbjct: 54 RPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWV 113
Query: 124 EA---GADPGAIAPF--------SFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATP 172
+A A PG A + + ++L + L + +VE +R ++ +PE +
Sbjct: 114 KAQEWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSME-KDPEKKK------ 166
Query: 173 WSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMV 232
YPGG FDPL Y D +KL+ LKV EIK+ RLA++
Sbjct: 167 ----------------YPGGA-FDPLG---------YSKDPKKLEELKVKEIKNGRLALL 200
Query: 233 AMLIFYFE--AGQGKTPLGAL 251
A + F + A G PL L
Sbjct: 201 AFVGFCVQQSAYPGTGPLENL 221
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum
lycopersicum GN=CAB6A PE=2 SV=1
Length = 246
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 95/188 (50%), Gaps = 44/188 (23%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWF 123
P +LDGS PGD+GFD LGLG+ PA L+ Y+E+ELIH RWAM AV GI V +A W
Sbjct: 55 RPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWV 114
Query: 124 EA---GADPGAIAPF--------SFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATP 172
+A A PG A + + ++L + L + +VE +R ++
Sbjct: 115 KAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSME-------------- 160
Query: 173 WSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMV 232
+ ++ YPGG FDPL Y D K + LKV EIK+ RLA++
Sbjct: 161 ---------KDSEKKKYPGGA-FDPLG---------YSKDPAKFEELKVKEIKNGRLALL 201
Query: 233 AMLIFYFE 240
A++ F +
Sbjct: 202 AIVGFCVQ 209
Score = 38.5 bits (88), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 78 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQA 116
FDPLG KDPA + + E+ +GR A+ A+VG V Q+
Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQS 211
>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplastic
OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Length = 268
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 95/211 (45%), Gaps = 54/211 (25%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF---VGQAWSGI 120
P +L+G PGDYG+D GL DP R E+IHGRWAM +G V Q W G+
Sbjct: 66 TPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGV 125
Query: 121 P-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPE 163
WF+AG+ +P + S ++LG Q+LLMG VE R
Sbjct: 126 EFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRI------- 178
Query: 164 SQSVEWATPWSRTAENFANATGEQG--YPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKV 221
N + GE YPGG++FDPL LA D LKV
Sbjct: 179 ---------------NGLDGVGEGNDLYPGGQYFDPLGLAD---------DPVTFAELKV 214
Query: 222 AEIKHARLAMVAMLIFYFEA-GQGKTPLGAL 251
EIK+ RLAM +M F+ +A GK PL L
Sbjct: 215 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 245
>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum
GN=lhca3 PE=1 SV=1
Length = 275
Score = 90.5 bits (223), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 116/243 (47%), Gaps = 62/243 (25%)
Query: 32 NRVTSSKKSVVVAALPPKKSWIPAVKGGGNLINPEW---------LDGSLPGDYGFDPLG 82
+ V S+K +V AA P VK GG + P W LDGSLPGDYGFDPLG
Sbjct: 30 SSVGCSRKGLVRAAA------TPPVKQGG-VDRPLWFASKQSLSYLDGSLPGDYGFDPLG 82
Query: 83 LGKDP----AFL--KWYREAELIHGRWAMAAVVGI----FVGQA-----WSGIPWFEAGA 127
L DP F+ +W E+I+GR+AM VG ++G+ + + WF+ G
Sbjct: 83 L-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGV 141
Query: 128 DPGAIAPFSF----GSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFA-- 181
P A +++ +L ++ LMG+ E +R+ D WA P S + F
Sbjct: 142 IPPA-GTYNYWADNYTLFVLEMALMGFAEHRRFQD----------WAKPGSMGKQYFLGL 190
Query: 182 ----NATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIF 237
+G YPGG FF+PL D + L LK+ E+K+ RLAM+A+L +
Sbjct: 191 EKGFGGSGNPAYPGGPFFNPLGFG---------KDEKSLKELKLKEVKNGRLAMLAILGY 241
Query: 238 YFE 240
+ +
Sbjct: 242 FIQ 244
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 49 KKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 108
K+ ++ KG G NP + PG F+PLG GKD LK + E+ +GR AM A+
Sbjct: 184 KQYFLGLEKGFGGSGNPAY-----PGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAI 238
Query: 109 VGIFVGQAWSGI 120
+G F+ +G+
Sbjct: 239 LGYFIQGLVTGV 250
>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)
OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1
Length = 231
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 108/220 (49%), Gaps = 34/220 (15%)
Query: 36 SSKKSVVVAALPPKKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYRE 95
S+++ V V A K SW+P ++ +P +LDGSL GD GFDPL L +DP L+W+ +
Sbjct: 23 STRRDVAVQA---KGSWLPGLQ------SPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQ 73
Query: 96 AELIHGRWAMAAVVGIFVGQAWSGIPWFEAGA---DPGAIAPFSFGSLLGTQLLLMGWVE 152
A++++GRWAM V G+ + + + A PG F+ S + +VE
Sbjct: 74 ADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVE 133
Query: 153 SKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPD 212
+RW D NP S + + ++++ E GYP G+ F+PL A + +
Sbjct: 134 IRRWQDIKNPGSVNQD------PIFKSYSLPPHECGYP-GRVFNPLNFAP-------LEN 179
Query: 213 TEKLDRLKVAEIKHARLAMVAMLIFYFEAG-QGKTPLGAL 251
EK E+ + RLAM+A L F + GK P L
Sbjct: 180 KEK-------ELANGRLAMLAFLGFLVQHNVHGKGPFENL 212
>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum
lycopersicum GN=CAB13 PE=1 SV=1
Length = 265
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 93/210 (44%), Gaps = 54/210 (25%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF---VGQAWSGIP 121
P +L+G PGDYG+D GL DP R E+IHGRWAM +G V + W +
Sbjct: 64 PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVD 123
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+AG+ +P + S ++LG Q++LMG VE R
Sbjct: 124 FKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI-------- 175
Query: 165 QSVEWATPWSRTAENFANATGEQG--YPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVA 222
N GE YPGG++FDPL LA D LKV
Sbjct: 176 --------------NGLPGVGEGNDLYPGGQYFDPLGLAD---------DPTTFAELKVK 212
Query: 223 EIKHARLAMVAMLIFYFEA-GQGKTPLGAL 251
EIK+ RLAM +M F+ +A GK PL L
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENL 242
>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum
lycopersicum GN=CAB8 PE=3 SV=1
Length = 273
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 46/243 (18%)
Query: 25 QALLAGTNRVTSSKKSVVVAALPPKKSWIPAVKGGGNLI-------NPEWLDGSLPGDYG 77
Q + + ++ + K S VV A + P VK G N + +LDG LPGD+G
Sbjct: 21 QIIGSRISQSVTRKASFVVRA-----ASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFG 75
Query: 78 FDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVVGI----FVGQA-----WSGIPW 122
FDPLGL DP F+ KW E+I+GR+AM G +G+A + + W
Sbjct: 76 FDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAW 134
Query: 123 FEAGADPGAIAPFSF----GSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 178
F+ G P A +++ +L ++ LMG+ E +R+ D+ P S ++ E
Sbjct: 135 FQTGVIPPA-GTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFL----GLE 189
Query: 179 NFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFY 238
+G+ YPGG F+PL D + + LK+ EIK+ RLAM+A+L ++
Sbjct: 190 KGLGGSGDPAYPGGPLFNPLGFG---------KDEKSMKELKLKEIKNGRLAMLAILGYF 240
Query: 239 FEA 241
+A
Sbjct: 241 IQA 243
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 69 DGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI 120
D + PG F+PLG GKD +K + E+ +GR AM A++G F+ +G+
Sbjct: 197 DPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGV 248
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 95/209 (45%), Gaps = 49/209 (23%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS----- 118
PE+L G PGDYG+D GL DP YRE ELIH RWA+ +GI + S
Sbjct: 50 TPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGV 109
Query: 119 --GIP-WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPE 163
G P WF+AGA + I S + L Q++LMG E+ R
Sbjct: 110 QFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR-------- 161
Query: 164 SQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAE 223
+ +E F + + YPGG FDPL LA PDT LKV E
Sbjct: 162 ---------ANGGSEGFLDDL-DTLYPGGP-FDPLGLADD-------PDT--FAELKVKE 201
Query: 224 IKHARLAMVAMLIFYFEA-GQGKTPLGAL 251
IK+ RLAM + L F+ +A GK P+ L
Sbjct: 202 IKNGRLAMFSCLGFFVQAIVTGKGPVQNL 230
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 93/207 (44%), Gaps = 49/207 (23%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP- 121
P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125
Query: 122 ----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 165
WF+AG+ +P + S ++ TQ++LMG VE R
Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR---------- 175
Query: 166 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIK 225
V P AE+ YPGG FDPL LA D E LKV EIK
Sbjct: 176 -VAGEGPLGE-AEDLL-------YPGGS-FDPLGLA---------TDPEAFAELKVKEIK 216
Query: 226 HARLAMVAMLIFYFEA-GQGKTPLGAL 251
+ RLAM +M F+ +A GK PL L
Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLENL 243
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 91/207 (43%), Gaps = 50/207 (24%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP- 121
P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 124
Query: 122 ----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 165
WF+AG+ +P + S S+ TQ++LMG VE R
Sbjct: 125 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVA-------- 176
Query: 166 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIK 225
P + YPGG FDPL LA D E+ LKV E+K
Sbjct: 177 ----GGPLGEIVDPL--------YPGGS-FDPLGLA---------EDPERSAELKVKELK 214
Query: 226 HARLAMVAMLIFYFEA-GQGKTPLGAL 251
+ RLAM +M F+ +A GK PL L
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENL 241
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 91/209 (43%), Gaps = 51/209 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ---AWSGI 120
P +L G PGDYG+D GL DP K YRE E+IH RWA+ +GI + ++G+
Sbjct: 55 TPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGV 114
Query: 121 P-----WFEAGAD------------PGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPE 163
WF+AGA P I + + L Q++LMG +E R P
Sbjct: 115 KFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNG--GPA 172
Query: 164 SQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAE 223
+ ++ P G+ FDPL LA D + LKV E
Sbjct: 173 GEGLDPLYP-------------------GESFDPLGLAD---------DPDTFAELKVKE 204
Query: 224 IKHARLAMVAMLIFYFEA-GQGKTPLGAL 251
IK+ RLAM + F+ +A GK P+ L
Sbjct: 205 IKNGRLAMFSCFGFFVQAIVTGKGPIQNL 233
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS--GIP 121
+P +L G PGDYG+D GL DP RE E+IH RWAM +G + S G+
Sbjct: 68 SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 127
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+AG+ +P + S ++ TQ++LMG VE R
Sbjct: 128 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIA------- 180
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
P + YPGG FDPL LA D E LKV E+
Sbjct: 181 -----GGPLGEVVDPL--------YPGGS-FDPLGLAD---------DPEAFAELKVKEL 217
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK PL L
Sbjct: 218 KNGRLAMFSMFGFFVQAIVTGKGPLENL 245
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP 121
+P +L G PGDYG+D GL DP RE E+IHGRWAM +G + A +G+
Sbjct: 64 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVK 123
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+ G+ +P + S ++ Q++LMG VE R
Sbjct: 124 FGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA------- 176
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
P + YPGG FDPL LA D E LKV EI
Sbjct: 177 -----GGPLGEVVDPL--------YPGGS-FDPLGLA---------DDAEAFAELKVKEI 213
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK PL L
Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENL 241
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 80.9 bits (198), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 94/208 (45%), Gaps = 49/208 (23%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP 121
+P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 125
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+AG+ +P + S ++ TQ++LMG VE R
Sbjct: 126 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR--------- 176
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
V P AE+ YPGG FDPL LA D E LKV E+
Sbjct: 177 --VAGNGPLGE-AEDLL-------YPGGS-FDPLGLA---------TDPEAFAELKVKEL 216
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK P+ L
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPIENL 244
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 94/208 (45%), Gaps = 49/208 (23%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP 121
+P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 125
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+AG+ +P + S ++ TQ++LMG VE R
Sbjct: 126 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR--------- 176
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
V P AE+ YPGG FDPL LA D E LKV E+
Sbjct: 177 --VAGNGPLGE-AEDLL-------YPGGS-FDPLGLA---------TDPEAFAELKVKEL 216
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK P+ L
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPIENL 244
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 94/208 (45%), Gaps = 49/208 (23%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP 121
+P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 125
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+AG+ +P + S ++ TQ++LMG VE R
Sbjct: 126 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR--------- 176
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
V P AE+ YPGG FDPL LA D E LKV E+
Sbjct: 177 --VAGNGPLGE-AEDLL-------YPGGS-FDPLGLA---------TDPEAFAELKVKEL 216
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK P+ L
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPIENL 244
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 88/208 (42%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQA 116
+P +L G PGDYG+D GL DP RE E+IH RWAM +G G
Sbjct: 69 SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 128
Query: 117 WSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
+ WF+AG+ +P + S ++ TQ++LMG VE R
Sbjct: 129 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIA------- 181
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
P + YPGG FDPL LA D E LKV E+
Sbjct: 182 -----GGPLGEVVDPL--------YPGGS-FDPLGLAD---------DPEAFAELKVKEL 218
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK PL L
Sbjct: 219 KNGRLAMFSMFGFFVQAIVTGKGPLENL 246
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP 121
+P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 125
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+AG+ +P + S ++ Q++LMG VE R
Sbjct: 126 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA------- 178
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
P + YPGG FDPL LA D E LKV EI
Sbjct: 179 -----GEPLGEVVDPL--------YPGGS-FDPLGLA---------EDPEAFAELKVKEI 215
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK PL L
Sbjct: 216 KNGRLAMFSMFGFFVQALVTGKGPLENL 243
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 87/207 (42%), Gaps = 50/207 (24%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAW 117
P +L G PGDYG+D GL DP RE E+IH RWAM +G G +
Sbjct: 64 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 123
Query: 118 SGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 165
WF+AG+ +P I S ++ TQ++LMG VE R
Sbjct: 124 GEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIA-------- 175
Query: 166 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIK 225
P + YPGG F DPL LA D E LKV E+K
Sbjct: 176 ----GGPLGEVTDPI--------YPGGSF-DPLGLAD---------DPEAFAELKVKELK 213
Query: 226 HARLAMVAMLIFYFEA-GQGKTPLGAL 251
+ RLAM +M F+ +A GK PL L
Sbjct: 214 NGRLAMFSMFGFFVQAIVTGKGPLENL 240
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 106/252 (42%), Gaps = 56/252 (22%)
Query: 24 SQALLAGTNRVTSSKKSVVVAALPPKKSWI--PAVKGGGNLI--NPEWLDGSLPGDYGFD 79
S + ++G R+T K V + P W VK G +P +L G PGDYG+D
Sbjct: 23 SASEISGNGRITMRK--AVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 80
Query: 80 PLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGA----- 127
GL DP RE E+IH RWAM +G + A +G+ WF+AG+
Sbjct: 81 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 140
Query: 128 -------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENF 180
+P + S ++ Q++LMG VE R P +
Sbjct: 141 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA------------GGPLGEVVDPL 188
Query: 181 ANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFE 240
YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +
Sbjct: 189 --------YPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 230
Query: 241 A-GQGKTPLGAL 251
A GK PL L
Sbjct: 231 AIVTGKGPLENL 242
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 89/208 (42%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP 121
P +L+G GDYG+D GL DP RE E+IH RWAM +G + A SG+
Sbjct: 68 TPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVK 127
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+AGA +P + S ++ Q++LMG VE R
Sbjct: 128 FGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA------- 180
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
P + YPGG F DPL LA D + LKV EI
Sbjct: 181 -----GGPLGEVTDPI--------YPGGSF-DPLGLAD---------DPDTFAELKVKEI 217
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK PL L
Sbjct: 218 KNGRLAMFSMFGFFVQAIVTGKGPLENL 245
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP 121
+P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+AG+ +P + S ++ Q++LMG VE R
Sbjct: 127 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIA------- 179
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
P + YPGG FDPL LA D E LKV EI
Sbjct: 180 -----GGPLGEVVDPL--------YPGGS-FDPLGLAD---------DPEAFAELKVKEI 216
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK PL L
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENL 244
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP 121
+P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+AG+ +P + S ++ Q++LMG VE R
Sbjct: 127 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA------- 179
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
P + YPGG FDPL LA D E LKV EI
Sbjct: 180 -----GGPLGEVVDPL--------YPGGS-FDPLGLAD---------DPEAFAELKVKEI 216
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK PL L
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENL 244
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP 121
+P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+AG+ +P + S ++ Q++LMG VE R
Sbjct: 127 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA------- 179
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
P + YPGG FDPL LA D E LKV EI
Sbjct: 180 -----GGPLGEVVDPL--------YPGGS-FDPLGLA---------EDPEAFAELKVKEI 216
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK PL L
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENL 244
>sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplastic (Fragment)
OS=Glycine max PE=2 SV=1
Length = 245
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 89/207 (42%), Gaps = 50/207 (24%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGI-- 120
P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 46 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 105
Query: 121 ---PWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 165
WF+AG+ + I S ++ TQ++LMG VE R
Sbjct: 106 GEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIA-------- 157
Query: 166 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIK 225
P + YPGG FDPL LA D E LKV EIK
Sbjct: 158 ----GGPLGEVTDPI--------YPGGS-FDPLALAD---------DPEAFAELKVKEIK 195
Query: 226 HARLAMVAMLIFYFEA-GQGKTPLGAL 251
+ RLAM +M F+ +A GK PL L
Sbjct: 196 NGRLAMFSMFGFFVQAIVTGKGPLENL 222
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 89/207 (42%), Gaps = 50/207 (24%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP- 121
P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 75 PSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 134
Query: 122 ----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 165
WF+AGA +P + S ++ Q++LMG VE R
Sbjct: 135 GEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIA-------- 186
Query: 166 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIK 225
P + YPGG F DPL LA D E LKV EIK
Sbjct: 187 ----GGPLGEVTDPI--------YPGGSF-DPLGLA---------EDPEAFAELKVKEIK 224
Query: 226 HARLAMVAMLIFYFEA-GQGKTPLGAL 251
+ RLAM +M F+ +A GK P+ L
Sbjct: 225 NGRLAMFSMFGFFVQAIVTGKGPIENL 251
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP 121
+P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 125
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+AG+ +P + S ++ Q++LMG VE R
Sbjct: 126 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA------- 178
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
P + YPGG FDPL LA D E LKV EI
Sbjct: 179 -----GGPLGEVVDPL--------YPGGS-FDPLGLA---------EDPEAFAELKVKEI 215
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK PL L
Sbjct: 216 KNGRLAMFSMFGFFVQAIVTGKGPLENL 243
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP 121
+P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 65 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 124
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+AG+ +P + S ++ Q++LMG VE R
Sbjct: 125 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA------- 177
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
P + YPGG FDPL LA D E LKV EI
Sbjct: 178 -----GGPLGEVVDPL--------YPGGS-FDPLGLA---------EDPEAFAELKVKEI 214
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK PL L
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENL 242
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 89/207 (42%), Gaps = 50/207 (24%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP- 121
P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 62 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 121
Query: 122 ----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 165
WF+AG+ +P I S ++ Q++LMG VE R
Sbjct: 122 GEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIA-------- 173
Query: 166 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIK 225
P + YPGG FDPL LA D E LKV EIK
Sbjct: 174 ----GGPLGEVVDPL--------YPGGS-FDPLGLAD---------DPEAFAELKVKEIK 211
Query: 226 HARLAMVAMLIFYFEA-GQGKTPLGAL 251
+ RLAM +M F+ +A GK PL L
Sbjct: 212 NGRLAMFSMFGFFVQAIVTGKGPLENL 238
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 91/207 (43%), Gaps = 50/207 (24%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP- 121
P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 125
Query: 122 ----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 165
WF+AG+ +P I S ++ Q++LMG VE R P +
Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG--GPLGE 183
Query: 166 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIK 225
V + YPGG FDPL LA D E LKV EIK
Sbjct: 184 VV------------------DPLYPGGA-FDPLGLAD---------DPEAFAELKVKEIK 215
Query: 226 HARLAMVAMLIFYFEA-GQGKTPLGAL 251
+ RLAM +M F+ +A GK PL L
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPLENL 242
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum
vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 91/201 (45%), Gaps = 46/201 (22%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV---------- 113
P LDGS PGD+GFDPLGL P + ++E+E+ H RWAM V G+ V
Sbjct: 54 RPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWV 113
Query: 114 -GQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATP 172
Q W+ +P +A + + ++L + L + + E +R ++ +PE +
Sbjct: 114 KAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTME-KDPEKKK------ 166
Query: 173 WSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMV 232
YPGG FDPL + D K + LK+ EIK+ RLAM+
Sbjct: 167 ----------------YPGGA-FDPLGFSK---------DPAKFEELKLKEIKNGRLAML 200
Query: 233 AMLIFYFE--AGQGKTPLGAL 251
A + F + A G PL L
Sbjct: 201 AFVGFCVQQSAYPGTGPLENL 221
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 89/207 (42%), Gaps = 50/207 (24%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP- 121
P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 122 ----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 165
WF+AG+ +P + S ++ Q++LMG +E R
Sbjct: 128 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVA-------- 179
Query: 166 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIK 225
P + YPGG F DPL LA D E LKV EIK
Sbjct: 180 ----GGPLGEVTDPL--------YPGGSF-DPLGLAD---------DPEAFAELKVKEIK 217
Query: 226 HARLAMVAMLIFYFEA-GQGKTPLGAL 251
+ RLAM +M F+ +A GK PL L
Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLDNL 244
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 89/207 (42%), Gaps = 50/207 (24%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP- 121
P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKF 126
Query: 122 ----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 165
WF+AG+ +P + S ++ Q++LMG VE R
Sbjct: 127 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA-------- 178
Query: 166 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIK 225
P + YPGG FDPL LA D E LKV EIK
Sbjct: 179 ----GGPLGEVIDPL--------YPGGS-FDPLGLAD---------DPEAFAELKVKEIK 216
Query: 226 HARLAMVAMLIFYFEA-GQGKTPLGAL 251
+ RLAM +M F+ +A GK PL L
Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLENL 243
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 89/208 (42%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP 121
+P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+
Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126
Query: 122 -----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
WF+ G+ +P + S ++ Q++LMG VE R
Sbjct: 127 FGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA------- 179
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
P + YPGG FDPL LA D E LKV EI
Sbjct: 180 -----GEPLGEVVDPL--------YPGGS-FDPLGLA---------EDPEAFAELKVKEI 216
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK PL L
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENL 244
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 88/207 (42%), Gaps = 50/207 (24%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP- 121
P +L G P DYG+D GL DP RE E+IH RWAM +G + A +GI
Sbjct: 68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKF 127
Query: 122 ----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 165
WF+AGA +P + S ++ Q++LMG VE R
Sbjct: 128 GEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA-------- 179
Query: 166 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIK 225
P + YPGG FDPL LA D E LKV EIK
Sbjct: 180 ----GGPLGEVIDPL--------YPGGS-FDPLGLA---------EDPEAFAELKVKEIK 217
Query: 226 HARLAMVAMLIFYFEA-GQGKTPLGAL 251
+ RLAM +M F+ +A GK PL L
Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLENL 244
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQA 116
P +L G PGDYG+D GL DP RE E+IH RWAM +G G
Sbjct: 65 TPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVT 124
Query: 117 WSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
+ WF+AG+ +P I S ++ Q++LMG+VE R P
Sbjct: 125 FGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGG--GPLG 182
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
+ ++ + YPGG F DPL LA D E LKV EI
Sbjct: 183 EGLD------------------KIYPGGAF-DPLGLA---------DDPEAFAELKVKEI 214
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK P+ L
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIENL 242
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 58 GGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV 113
GGG L E LD PG FDPLGL DP + E+ +GR AM ++ G FV
Sbjct: 177 GGGPL--GEGLDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 91/208 (43%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQA 116
P +L G PGDYG+D GL DP RE E+IH RWAM +G G
Sbjct: 37 TPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVT 96
Query: 117 WSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
+ WF+AG+ +P I S ++ +Q++LMG+VE R P
Sbjct: 97 FGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGG--GPLG 154
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
+ ++ + YPGG F DPL LA D E LKV EI
Sbjct: 155 EGLD------------------KIYPGGAF-DPLGLAD---------DPEAFAELKVKEI 186
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK P+ L
Sbjct: 187 KNGRLAMFSMFGFFVQAIVTGKGPIENL 214
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 58 GGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV 113
GGG L E LD PG FDPLGL DP + E+ +GR AM ++ G FV
Sbjct: 149 GGGPL--GEGLDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 201
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 87/208 (41%), Gaps = 50/208 (24%)
Query: 64 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQA 116
P +L G PGDYG+D GL DP RE E+IH RWAM +G G
Sbjct: 64 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQ 123
Query: 117 WSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPES 164
+ WF+AGA +P + S ++ TQ++LMG +E R
Sbjct: 124 FGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYR--------- 174
Query: 165 QSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEI 224
P + YPGG F DPL LA D E LKV EI
Sbjct: 175 ---VGGGPLGEGLDPL--------YPGGAF-DPLGLAD---------DPEAFAELKVKEI 213
Query: 225 KHARLAMVAMLIFYFEA-GQGKTPLGAL 251
K+ RLAM +M F+ +A GK P+ L
Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPIENL 241
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 86/207 (41%), Gaps = 50/207 (24%)
Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAW 117
P +L G PGDYG+D GL DP RE E+IH RWAM +G G +
Sbjct: 63 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 122
Query: 118 SGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 165
WF+AG+ +P I S ++ Q++LMG VE R
Sbjct: 123 GEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA-------- 174
Query: 166 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIK 225
P + YPGG FDPL LA D E LKV E+K
Sbjct: 175 ----GGPLGEVVDPL--------YPGGS-FDPLGLAD---------DPEAFAELKVKELK 212
Query: 226 HARLAMVAMLIFYFEA-GQGKTPLGAL 251
+ RLAM +M F+ +A GK PL L
Sbjct: 213 NGRLAMFSMFGFFVQAIVTGKGPLENL 239
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,207,395
Number of Sequences: 539616
Number of extensions: 4852060
Number of successful extensions: 9700
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 9382
Number of HSP's gapped (non-prelim): 181
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)