BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025427
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W207|CSN2_ARATH COP9 signalosome complex subunit 2 OS=Arabidopsis thaliana GN=CSN2
PE=1 SV=1
Length = 439
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/230 (89%), Positives = 218/230 (94%)
Query: 1 MEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 60
MEPEKA+WGFKALKQTVK+YYRLGKYKEMM+AY EMLTYIKSAVTRNYSEKCINNIMDFV
Sbjct: 54 MEPEKADWGFKALKQTVKIYYRLGKYKEMMEAYTEMLTYIKSAVTRNYSEKCINNIMDFV 113
Query: 61 SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHK 120
SGSASQN LL+EFYQTTLKALEEAKNERLWFKTNLKLC IWFD+GEY RM+KILKELHK
Sbjct: 114 SGSASQNTGLLQEFYQTTLKALEEAKNERLWFKTNLKLCNIWFDIGEYRRMTKILKELHK 173
Query: 121 SCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGII 180
SCQ+EDGTDDQKKGSQLLEVYAIEIQ+YTETK+NKKLKQLY KALAIKSAIPHPRIMGII
Sbjct: 174 SCQKEDGTDDQKKGSQLLEVYAIEIQIYTETKDNKKLKQLYHKALAIKSAIPHPRIMGII 233
Query: 181 RECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYGFYLHLLF 230
RECGGKMHMAERQW +AATDFFEAFKNYDEAGNQRRIQCLKY ++L
Sbjct: 234 RECGGKMHMAERQWEEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLM 283
>sp|Q54HL6|CSN2_DICDI COP9 signalosome complex subunit 2 OS=Dictyostelium discoideum
GN=csn2 PE=1 SV=1
Length = 449
Score = 325 bits (832), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 147/231 (63%), Positives = 188/231 (81%)
Query: 4 EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 63
EK EWGFKALK+ KLY+R+G + M++++++ L Y KS+ + NY EK IN+++D VS S
Sbjct: 65 EKGEWGFKALKKITKLYFRIGDFDNMLESFKKFLPYTKSSASSNYIEKGINSVLDMVSSS 124
Query: 64 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQ 123
+ ++++ + TLK+L + KNER+WF+TNLKL K+ F+ EYGR++KIL++LHKSC+
Sbjct: 125 NTIELDMIQKVFDLTLKSLLDTKNERVWFRTNLKLAKLLFEKAEYGRLAKILRDLHKSCE 184
Query: 124 REDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIREC 183
EDGTDDQKKGSQL+++YA+EIQMYTETKNNKKLK LY+KAL IKSAIPHPRIMGIIREC
Sbjct: 185 LEDGTDDQKKGSQLVDIYALEIQMYTETKNNKKLKDLYKKALEIKSAIPHPRIMGIIREC 244
Query: 184 GGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYGFYLHLLFLISI 234
GGKMHMAE++W A TDFFEAFKNYDEAGN RRIQCLKY +L L +I
Sbjct: 245 GGKMHMAEKEWEKAHTDFFEAFKNYDEAGNSRRIQCLKYLVLACMLMLSTI 295
>sp|Q6IR75|CSN2_XENLA COP9 signalosome complex subunit 2 (Fragment) OS=Xenopus laevis
GN=csn2 PE=2 SV=1
Length = 441
Score = 314 bits (804), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 145/230 (63%), Positives = 188/230 (81%), Gaps = 2/230 (0%)
Query: 1 MEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 60
+E EK EWGFKALKQ +K+ ++LG Y EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++
Sbjct: 58 LEGEKGEWGFKALKQMIKINFKLGNYPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI 117
Query: 61 SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHK 120
S S+ LL+EFY+TTL AL++AKN+RLWFKTN KL K++ + EYG++ KIL++LH+
Sbjct: 118 S--TSKQMDLLQEFYETTLDALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQ 175
Query: 121 SCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGII 180
SCQ +DG DD KKG+QLLE+YA+EIQMYT KNNKKLK LY+++L IKSAIPHP IMG+I
Sbjct: 176 SCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVI 235
Query: 181 RECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYGFYLHLLF 230
RECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CLKY ++L
Sbjct: 236 RECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 285
>sp|P61203|CSN2_RAT COP9 signalosome complex subunit 2 OS=Rattus norvegicus GN=Cops2
PE=2 SV=1
Length = 443
Score = 310 bits (793), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 143/230 (62%), Positives = 188/230 (81%), Gaps = 2/230 (0%)
Query: 1 MEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 60
+E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++
Sbjct: 60 LEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI 119
Query: 61 SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHK 120
S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K++ + EYG++ KIL++LH+
Sbjct: 120 S--TSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQ 177
Query: 121 SCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGII 180
SCQ +DG DD KKG+QLLE+YA+EIQMYT KNNKKLK LY+++L IKSAIPHP IMG+I
Sbjct: 178 SCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVI 237
Query: 181 RECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYGFYLHLLF 230
RECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CLKY ++L
Sbjct: 238 RECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 287
>sp|P61202|CSN2_MOUSE COP9 signalosome complex subunit 2 OS=Mus musculus GN=Cops2 PE=1
SV=1
Length = 443
Score = 310 bits (793), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 143/230 (62%), Positives = 188/230 (81%), Gaps = 2/230 (0%)
Query: 1 MEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 60
+E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++
Sbjct: 60 LEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI 119
Query: 61 SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHK 120
S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K++ + EYG++ KIL++LH+
Sbjct: 120 S--TSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQ 177
Query: 121 SCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGII 180
SCQ +DG DD KKG+QLLE+YA+EIQMYT KNNKKLK LY+++L IKSAIPHP IMG+I
Sbjct: 178 SCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVI 237
Query: 181 RECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYGFYLHLLF 230
RECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CLKY ++L
Sbjct: 238 RECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 287
>sp|P61201|CSN2_HUMAN COP9 signalosome complex subunit 2 OS=Homo sapiens GN=COPS2 PE=1
SV=1
Length = 443
Score = 310 bits (793), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 143/230 (62%), Positives = 188/230 (81%), Gaps = 2/230 (0%)
Query: 1 MEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 60
+E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++
Sbjct: 60 LEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI 119
Query: 61 SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHK 120
S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K++ + EYG++ KIL++LH+
Sbjct: 120 S--TSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQ 177
Query: 121 SCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGII 180
SCQ +DG DD KKG+QLLE+YA+EIQMYT KNNKKLK LY+++L IKSAIPHP IMG+I
Sbjct: 178 SCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVI 237
Query: 181 RECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYGFYLHLLF 230
RECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CLKY ++L
Sbjct: 238 RECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 287
>sp|Q94899|CSN2_DROME COP9 signalosome complex subunit 2 OS=Drosophila melanogaster
GN=alien PE=1 SV=2
Length = 444
Score = 308 bits (790), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 144/227 (63%), Positives = 184/227 (81%), Gaps = 2/227 (0%)
Query: 4 EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 63
EK EWGFKALKQ +K+ +RL Y EMM Y+++LTYIKSAVTRN+SEK IN+I+D++S
Sbjct: 64 EKGEWGFKALKQMIKINFRLCNYDEMMVRYKQLLTYIKSAVTRNHSEKSINSILDYIS-- 121
Query: 64 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQ 123
S+N +LL+ FY+TTL AL +AKN+RLWFKTN KL K++FD ++ ++ KILK+LH+SCQ
Sbjct: 122 TSKNMALLQNFYETTLDALRDAKNDRLWFKTNTKLGKLYFDRSDFTKLQKILKQLHQSCQ 181
Query: 124 REDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIREC 183
+DG DD KKG+QLLE+YA+EIQMYT KNNKKLK LY+++L IKSAIPHP IMG+IREC
Sbjct: 182 TDDGEDDLKKGTQLLEIYALEIQMYTVQKNNKKLKALYEQSLHIKSAIPHPLIMGVIREC 241
Query: 184 GGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYGFYLHLLF 230
GGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CLKY ++L
Sbjct: 242 GGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 288
>sp|Q6IQT4|CSN2_DANRE COP9 signalosome complex subunit 2 OS=Danio rerio GN=cops2 PE=2
SV=1
Length = 443
Score = 308 bits (790), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 142/230 (61%), Positives = 188/230 (81%), Gaps = 2/230 (0%)
Query: 1 MEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 60
+E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++
Sbjct: 60 LEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI 119
Query: 61 SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHK 120
S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K++ + E+G++ KIL++LH+
Sbjct: 120 S--TSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEFGKLQKILRQLHQ 177
Query: 121 SCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGII 180
SCQ +DG DD KKG+QLLE+YA+EIQMYT KNNKKLK LY+++L IKSAIPHP IMG+I
Sbjct: 178 SCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVI 237
Query: 181 RECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYGFYLHLLF 230
RECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CLKY ++L
Sbjct: 238 RECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 287
>sp|Q5B3U7|CSN2_EMENI COP9 signalosome complex subunit 2 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=csnB PE=1 SV=2
Length = 506
Score = 305 bits (780), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 133/224 (59%), Positives = 181/224 (80%), Gaps = 2/224 (0%)
Query: 1 MEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 60
+E +K +WGFK LKQ +KL ++LG+Y + ++ YRE+LTY+KSAVTRNYSEK INN++D++
Sbjct: 61 LEQDKGDWGFKGLKQAIKLEFKLGRYSDAVEHYRELLTYVKSAVTRNYSEKSINNMLDYI 120
Query: 61 S-GSASQN-FSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKEL 118
GS + + + EFY TL + + NERLW KTN+KL ++W + EYG++SK ++EL
Sbjct: 121 EKGSDDEKAYQCMEEFYSLTLNSFQNTNNERLWLKTNIKLARLWLERREYGQLSKKVREL 180
Query: 119 HKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMG 178
H++CQREDG+DD KG+ LLE+YA+EIQMY ETKNNK+LK LYQ+AL ++SA+PHP+IMG
Sbjct: 181 HRACQREDGSDDPSKGTYLLELYALEIQMYAETKNNKRLKALYQRALRVRSAVPHPKIMG 240
Query: 179 IIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKY 222
IIRECGGKMHM+E W +A +DFFE+F+NYDEAG+ +RIQ LKY
Sbjct: 241 IIRECGGKMHMSEENWEEAQSDFFESFRNYDEAGSMQRIQVLKY 284
>sp|O01422|CSN2_CAEEL COP9 signalosome complex subunit 2 OS=Caenorhabditis elegans
GN=csn-2 PE=1 SV=2
Length = 495
Score = 283 bits (725), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 182/233 (78%), Gaps = 5/233 (2%)
Query: 1 MEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 60
+E EK EWGFKALKQ +K+ + + ++M++ YR++LTYIKSAVT+NYSEK IN I+D++
Sbjct: 57 LEGEKGEWGFKALKQMIKITFGQNRLEKMLEYYRQLLTYIKSAVTKNYSEKSINAILDYI 116
Query: 61 SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHK 120
S S+ LL+ FY+TTL AL++AKNERLWFKTN KL K++FD+ E+ ++ KI+K+L
Sbjct: 117 S--TSRQMDLLQHFYETTLDALKDAKNERLWFKTNTKLGKLFFDLHEFTKLEKIVKQLKV 174
Query: 121 SCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQ---KALAIKSAIPHPRIM 177
SC+ E G +DQ+KG+QLLE+YA+EIQMYTE KNNK LK +Y+ +A+ KSAIPHP I+
Sbjct: 175 SCKNEQGEEDQRKGTQLLEIYALEIQMYTEQKNNKALKWVYELATQAIHTKSAIPHPLIL 234
Query: 178 GIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYGFYLHLLF 230
G IRECGGKMH+ + ++ DA TDFFEAFKNYDE+G+ RR CLKY ++L
Sbjct: 235 GTIRECGGKMHLRDGRFLDAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLI 287
>sp|Q7SI58|CSN2_NEUCR COP9 signalosome complex subunit 2 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=csn-2 PE=1 SV=1
Length = 490
Score = 276 bits (707), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 124/236 (52%), Positives = 173/236 (73%), Gaps = 2/236 (0%)
Query: 1 MEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 60
+E EK +WGFKALKQ +KL ++L +Y+E + Y E+LTY+KSAVTRNYSEK I+N+++++
Sbjct: 59 LEQEKGDWGFKALKQAIKLEFKLKRYQEATEHYEELLTYVKSAVTRNYSEKSIDNMLNYI 118
Query: 61 SG--SASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKEL 118
+ + +FY TL+ + NERLW KTN+KL ++ D +Y +++ L+EL
Sbjct: 119 EKGYDDPKAVQCIEKFYSLTLQCFQSTNNERLWLKTNIKLARLLLDRKDYHAVARKLREL 178
Query: 119 HKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMG 178
H +C++ DGTDD KG+ LE+YA+EIQMY+ET+NN +LK LYQKAL ++SA+PHP+I G
Sbjct: 179 HNACRKSDGTDDPSKGTYSLEIYALEIQMYSETRNNNQLKVLYQKALKVRSAVPHPKIQG 238
Query: 179 IIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYGFYLHLLFLISI 234
+IRECGGKMHM+E W +A +DFFEAF+NYDEAG+ RRIQ LKY +L I
Sbjct: 239 VIRECGGKMHMSEENWKEAQSDFFEAFRNYDEAGDLRRIQVLKYLLLTTMLMKSDI 294
>sp|Q9HFR0|CSN2_SCHPO COP9 signalosome complex subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=csn2 PE=1 SV=1
Length = 437
Score = 224 bits (571), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 160/230 (69%), Gaps = 4/230 (1%)
Query: 2 EPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIK-SAVTRNYSEKCINNIMDFV 60
E E+ EW FKALKQ K+ ++L KY +M+ +Y+ +L Y ++T+NYSEK I NI+++
Sbjct: 61 EGEQNEWAFKALKQITKINFQLKKYDDMLQSYQRLLGYTNWLSITKNYSEKSIYNIVEY- 119
Query: 61 SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHK 120
S+ +N L +FY T KAL+ NERL K + + + Y + +L+++H+
Sbjct: 120 -ASSCENTEFLEKFYDVTTKALQNLNNERLMLKVLMHVARFLLTQKNYHKFKYLLRQMHE 178
Query: 121 SCQREDGT-DDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGI 179
E+ + DQ +G+ LLE+Y++EIQMY++ ++NK+LK+LYQ +L +K+AIPHPRIMGI
Sbjct: 179 LLSDENNSVADQNRGTHLLELYSLEIQMYSDIEDNKRLKELYQSSLRVKTAIPHPRIMGI 238
Query: 180 IRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYGFYLHLL 229
IRECGGKMHM E QW++A T+FFE+FK+YDEAG+ RI+ LKY ++L
Sbjct: 239 IRECGGKMHMQENQWSEAQTNFFESFKSYDEAGSSDRIRVLKYLVLANML 288
>sp|Q7KLV9|PSD11_DROME 26S proteasome non-ATPase regulatory subunit 11 OS=Drosophila
melanogaster GN=Rpn6 PE=1 SV=1
Length = 422
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 28/219 (12%)
Query: 15 QTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMD-FVSGSASQNFSLLRE 73
Q +LY + GK KE+ D + ++ S++++ + K + +++D F+ A +
Sbjct: 52 QQGELYKQEGKAKELADLIKVTRPFL-SSISKAKAAKLVRSLVDMFLDMDAGTGIEV--- 107
Query: 74 FYQTTLKALEEAKNE-RLWFKTNL--KLCKIWFDMGEYGRM----SKILKELHKSCQRED 126
Q +E AK E R + + +L +L ++FD Y +++L+EL K
Sbjct: 108 --QLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKK------ 159
Query: 127 GTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI--PHPRIMGIIRECG 184
DD+ + L+EV +E + Y N K + A +AI P P++ G +
Sbjct: 160 -LDDK---NLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCP-PKVQGALDLQS 214
Query: 185 GKMHMA-ERQWADAATDFFEAFKNYDEAGNQRRIQCLKY 222
G +H A ER + A + F+EAF+ +D + + + LKY
Sbjct: 215 GILHAADERDFKTAFSYFYEAFEGFDSVDSVKALTSLKY 253
>sp|Q54UB5|PSD11_DICDI 26S proteasome non-ATPase regulatory subunit 11 OS=Dictyostelium
discoideum GN=psmD11 PE=2 SV=1
Length = 413
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 11 KALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSL 70
+A+ + KL+ ++GK ++ R + + +++ ++K + N +D S + N +
Sbjct: 39 EAILRLAKLFVKIGKGDQLPTLLRSVRPFF-DKISKPKTDKIVRNFIDIFS-TVPDNLTT 96
Query: 71 LREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDD 130
L EF + ++ ++ L + KL + F+ +Y L L +R D
Sbjct: 97 LIEFVKENIQWCKDTNRIYLRQRLETKLFTLMFEAKDYANALSGLTTLLTEIKRLDD--- 153
Query: 131 QKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI--PHPRIMGIIRECGGKMH 188
L+E+ +E ++ KN K + A + I P P++ I G +H
Sbjct: 154 ---KPLLVEIQLVESRIQHALKNIPKARAALTSARTNANTIYCP-PKLQAEIDMQSGILH 209
Query: 189 MAERQWADAATDFFEAFKNYDEAGNQRRIQCLKY 222
E+ + A + FFE+++ YD + ++ LKY
Sbjct: 210 SEEKDYKTAFSYFFESYETYDSLEDPFAMKALKY 243
>sp|F1QGH9|PS11B_DANRE 26S proteasome non-ATPase regulatory subunit 11B OS=Danio rerio
GN=psmd11b PE=2 SV=1
Length = 422
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 79 LKALEEAKNERLWF---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQ 131
L+ +E AK E+ F +L ++FD Y S++L+EL K DD+
Sbjct: 111 LECIEWAKAEKRTFLRQALEARLISLYFDTKRYQEALQLESQLLQELKK-------MDDK 163
Query: 132 KKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI--PHPRIMGIIRECGGKMHM 189
+ L+EV +E + Y N K + A +AI P P++ + G +H
Sbjct: 164 ---ALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCP-PKLQAALDMQSGIIHA 219
Query: 190 AE-RQWADAATDFFEAFKNYDEAGNQRRIQCLKY 222
AE + W A + FFEAF+ YD + R + LKY
Sbjct: 220 AEEKDWKTAYSYFFEAFEGYDSIDSPRAVTALKY 253
>sp|F1LMZ8|PSD11_RAT 26S proteasome non-ATPase regulatory subunit 11 OS=Rattus
norvegicus GN=Psmd11 PE=2 SV=2
Length = 422
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 36 MLTYIK---SAVTRNYSEKCINNIMDF---VSGSASQNFSLLREFYQTTLKALEEAKNER 89
+L Y++ +++++ + + + +++D + + Q L L+ +E AK+E+
Sbjct: 69 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVEL-------CLECIEWAKSEK 121
Query: 90 LWF---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYA 142
F +L ++FD Y S++L+EL K DD+ + L+EV
Sbjct: 122 RTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKK-------MDDK---ALLVEVQL 171
Query: 143 IEIQMYTETKNNKKLKQLYQKALAIKSAI--PHPRIMGIIRECGGKMHMAE-RQWADAAT 199
+E + Y N K + A +AI P P++ + G +H AE + W A +
Sbjct: 172 LESKTYHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYS 230
Query: 200 DFFEAFKNYDEAGNQRRIQCLKY 222
F+EAF+ YD + + I LKY
Sbjct: 231 YFYEAFEGYDSIDSPKAITSLKY 253
>sp|O00231|PSD11_HUMAN 26S proteasome non-ATPase regulatory subunit 11 OS=Homo sapiens
GN=PSMD11 PE=1 SV=3
Length = 422
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 36 MLTYIK---SAVTRNYSEKCINNIMDF---VSGSASQNFSLLREFYQTTLKALEEAKNER 89
+L Y++ +++++ + + + +++D + + Q L L+ +E AK+E+
Sbjct: 69 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVEL-------CLECIEWAKSEK 121
Query: 90 LWF---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYA 142
F +L ++FD Y S++L+EL K DD+ + L+EV
Sbjct: 122 RTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKK-------MDDK---ALLVEVQL 171
Query: 143 IEIQMYTETKNNKKLKQLYQKALAIKSAI--PHPRIMGIIRECGGKMHMAE-RQWADAAT 199
+E + Y N K + A +AI P P++ + G +H AE + W A +
Sbjct: 172 LESKTYHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYS 230
Query: 200 DFFEAFKNYDEAGNQRRIQCLKY 222
F+EAF+ YD + + I LKY
Sbjct: 231 YFYEAFEGYDSIDSPKAITSLKY 253
>sp|Q2KI42|PSD11_BOVIN 26S proteasome non-ATPase regulatory subunit 11 OS=Bos taurus
GN=PSMD11 PE=2 SV=3
Length = 422
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 36 MLTYIK---SAVTRNYSEKCINNIMDF---VSGSASQNFSLLREFYQTTLKALEEAKNER 89
+L Y++ +++++ + + + +++D + + Q L L+ +E AK+E+
Sbjct: 69 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVEL-------CLECIEWAKSEK 121
Query: 90 LWF---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYA 142
F +L ++FD Y S++L+EL K DD+ + L+EV
Sbjct: 122 RTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKK-------MDDK---ALLVEVQL 171
Query: 143 IEIQMYTETKNNKKLKQLYQKALAIKSAI--PHPRIMGIIRECGGKMHMAE-RQWADAAT 199
+E + Y N K + A +AI P P++ + G +H AE + W A +
Sbjct: 172 LESKTYHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYS 230
Query: 200 DFFEAFKNYDEAGNQRRIQCLKY 222
F+EAF+ YD + + I LKY
Sbjct: 231 YFYEAFEGYDSIDSPKAITSLKY 253
>sp|Q8BG32|PSD11_MOUSE 26S proteasome non-ATPase regulatory subunit 11 OS=Mus musculus
GN=Psmd11 PE=1 SV=3
Length = 422
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 36 MLTYIK---SAVTRNYSEKCINNIMDF---VSGSASQNFSLLREFYQTTLKALEEAKNER 89
+L Y++ +++++ + + + +++D + + Q L L+ +E AK+E+
Sbjct: 69 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVEL-------CLECIEWAKSEK 121
Query: 90 LWF---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYA 142
F +L ++FD Y S++L+EL K DD+ + L+EV
Sbjct: 122 RTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKK-------MDDK---ALLVEVQL 171
Query: 143 IEIQMYTETKNNKKLKQLYQKALAIKSAI--PHPRIMGIIRECGGKMHMAE-RQWADAAT 199
+E + Y N K + A +AI P P++ + G +H AE + W A +
Sbjct: 172 LESKTYHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYS 230
Query: 200 DFFEAFKNYDEAGNQRRIQCLKY 222
F+EAF+ YD + + I LKY
Sbjct: 231 YFYEAFEGYDSIDSPKAITSLKY 253
>sp|F6P3G4|PS11A_DANRE 26S proteasome non-ATPase regulatory subunit 11A OS=Danio rerio
GN=psmd11a PE=2 SV=1
Length = 421
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 21/154 (13%)
Query: 79 LKALEEAKNERLWF---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQ 131
L+ +E AK+E+ F +L ++FD Y S++L+EL K DD+
Sbjct: 110 LECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALQLGSQLLQELKK-------MDDK 162
Query: 132 KKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI--PHPRIMGIIRECGGKMHM 189
+ L+E+ +E + Y N K + A +AI P P++ + G +H
Sbjct: 163 ---ALLVELQLLESKTYHALSNLPKARAALTSARTTANAIYCP-PKLQAALDMQSGIIHA 218
Query: 190 AE-RQWADAATDFFEAFKNYDEAGNQRRIQCLKY 222
AE + W A + F+EAF+ YD + R I LKY
Sbjct: 219 AEEKDWKTAYSYFYEAFEGYDSIDSPRAITALKY 252
>sp|F6XBL2|PSD11_XENTR 26S proteasome non-ATPase regulatory subunit 11 OS=Xenopus
tropicalis GN=psmd11 PE=3 SV=2
Length = 422
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 36 MLTYIK---SAVTRNYSEKCINNIMDF---VSGSASQNFSLLREFYQTTLKALEEAKNER 89
+L Y++ +++++ + + + +++D + + Q L L+ +E AK E+
Sbjct: 69 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVEL-------CLECIEWAKAEK 121
Query: 90 LWF---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYA 142
F +L ++FD Y S++L+EL K DD+ + L+EV
Sbjct: 122 RTFLRQALEARLVSLYFDTKRYQEALQLGSQLLRELKK-------MDDK---ALLVEVQL 171
Query: 143 IEIQMYTETKNNKKLKQLYQKALAIKSAI--PHPRIMGIIRECGGKMHMAE-RQWADAAT 199
+E + Y N K + A +AI P P++ + G +H AE + W A +
Sbjct: 172 LESKTYHALSNLPKARAALTSARTTANAIYCP-PKLQAALDMQSGIIHAAEEKDWKTAYS 230
Query: 200 DFFEAFKNYDEAGNQRRIQCLKY 222
F+EAF+ D + + I LKY
Sbjct: 231 YFYEAFEGNDSIDSPKAITALKY 253
>sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 OS=Arabidopsis
thaliana GN=RPN6A PE=1 SV=1
Length = 419
Score = 37.4 bits (85), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 19/229 (8%)
Query: 2 EPEKAEWGFKALKQTV-KLYYRLGKYKEMMDAYREMLTYIK---SAVTRNYSEKCINNIM 57
+P + + +Q + L RL + K D R++LT ++ S + + + K + I+
Sbjct: 32 DPSSSPEAIRIKEQAITNLCDRLTEEKRGED-LRKLLTKLRPFFSLIPKAKTAKIVRGII 90
Query: 58 DFVS---GSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKI 114
D V+ G+ +L +E + T K L + +L + + EY +
Sbjct: 91 DAVAKIPGTTDLQITLCKEMVEWT----RAEKRTFLRQRVEARLAALLMENKEYVEALAL 146
Query: 115 LKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI-PH 173
L L K +R DD+ L+++ +E +++ +N K K A +AI
Sbjct: 147 LSTLVKEVRR---LDDKL---LLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVP 200
Query: 174 PRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKY 222
P G I G +H E+ + + FFEAF++++ G+ R + LKY
Sbjct: 201 PAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFESFNALGDPRAVFSLKY 249
>sp|Q9SY69|PPR29_ARATH Pentatricopeptide repeat-containing protein At1g10270
OS=Arabidopsis thaliana GN=GRP23 PE=1 SV=1
Length = 913
Score = 33.1 bits (74), Expect = 1.8, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 68/184 (36%), Gaps = 29/184 (15%)
Query: 15 QTVKLYYRLGKYKEMMDAYREMLT---YIKSAVTRNYSEKCINNIMDFVSGSASQNFSLL 71
Q + + G E ++ YR +L + S+VT + K + +G SLL
Sbjct: 221 QIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQ-----AGRIGDAASLL 275
Query: 72 REFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQ 131
RE A N L + + D+G++ + + EL C DG
Sbjct: 276 REMLSKGQAADSTVYN---------NLIRGYLDLGDFDKAVEFFDELKSKCTVYDGI--- 323
Query: 132 KKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAE 191
V A ++ + E N+K+ + Y+ L K + HP ++ E K +
Sbjct: 324 --------VNATFMEYWFEKGNDKEAMESYRSLLDKKFRM-HPPTGNVLLEVFLKFGKKD 374
Query: 192 RQWA 195
WA
Sbjct: 375 EAWA 378
>sp|C1DW63|DNLJ_SULAA DNA ligase OS=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM
15241 / OCM 825) GN=ligA PE=3 SV=1
Length = 701
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 16 TVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFY 75
TVK +Y+LG K + D YR IK+ + + EK +NN+ + S+N L R Y
Sbjct: 490 TVKKFYKLGLLKSIPDIYRLDFRIIKN--IQGFGEKSVNNLKQAI--EESKNRPLYRLIY 545
Query: 76 QTTLKALEEAKNERLWFKTN 95
++ + E + L N
Sbjct: 546 GLGIRYVGEVTAKTLASAVN 565
>sp|A7ENU3|CLU_SCLS1 Clustered mitochondria protein homolog OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=clu1 PE=3 SV=1
Length = 1311
Score = 32.7 bits (73), Expect = 2.6, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 16/98 (16%)
Query: 79 LKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMS----KILKELHKSCQREDGTDDQKKG 134
L+ L+E + R WF+ +LK+C+ YG+ S +L +L ++ + D +
Sbjct: 1128 LQHLKEYHDSRTWFEASLKICE-----EVYGKHSINAATLLFQLAQALALDQ--DSKSAV 1180
Query: 135 SQLLEVYAIEI-QMYTETKNNKK----LKQLYQKALAI 167
+++ E Y I + ++ E KN K+ L+QL Q A++I
Sbjct: 1181 NRMRESYNIFLTELGAEDKNTKEAEKWLEQLTQNAVSI 1218
>sp|A6SFG0|CLU_BOTFB Clustered mitochondria protein homolog OS=Botryotinia fuckeliana
(strain B05.10) GN=clu1 PE=3 SV=1
Length = 1306
Score = 32.7 bits (73), Expect = 2.6, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 16/98 (16%)
Query: 79 LKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMS----KILKELHKSCQREDGTDDQKKG 134
L+ L+E + R WF+ +LK+C+ YG+ S +L +L ++ + D +
Sbjct: 1126 LQHLKEYHDSRTWFEASLKICE-----EVYGKHSINAATLLFQLAQALALDQ--DSKSAV 1178
Query: 135 SQLLEVYAIEI-QMYTETKNNKK----LKQLYQKALAI 167
+++ E Y I + ++ E KN K+ L+QL Q A++I
Sbjct: 1179 NRMRESYNIFLTELGAEDKNTKEAEKWLEQLTQNAVSI 1216
>sp|Q0WVW7|RQL5_ARATH ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana
GN=RECQL5 PE=2 SV=2
Length = 911
Score = 31.2 bits (69), Expect = 7.4, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 32 AYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLW 91
A + LT++ S T+ + + C V SASQ F + E QT L LE + + L
Sbjct: 611 AVGKFLTHVFSTETKQHEKIC-----SLVIESASQKFDMKEEVMQTILTHLELGEVQYLR 665
Query: 92 FKTNLKLC 99
L +C
Sbjct: 666 MLPQLNIC 673
>sp|Q9XIL5|PP154_ARATH Pentatricopeptide repeat-containing protein At2g15820
OS=Arabidopsis thaliana GN=At2g15820 PE=2 SV=3
Length = 849
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 17 VKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQ 76
++ Y ++G + + M+ +REM +I A Y + I++ + E +
Sbjct: 433 IEAYSKVGDFAKAMEIFREMEKHIGGATMSGY-----HKIIEVLCKVQQV------ELVE 481
Query: 77 TTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQ 123
T +K EE+ + L + +++ K++FD+G + ++ + + CQ
Sbjct: 482 TLMKEFEESGKKPL-LPSFIEIAKMYFDLGLHEKLEMAFVQCLEKCQ 527
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,514,370
Number of Sequences: 539616
Number of extensions: 3559187
Number of successful extensions: 13583
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 13542
Number of HSP's gapped (non-prelim): 52
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)