Query 025428
Match_columns 253
No_of_seqs 320 out of 2951
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 10:05:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025428.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025428hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gb4_A Thiopurine S-methyltran 99.7 2.2E-16 7.6E-21 137.0 10.8 80 163-243 67-165 (252)
2 1pjz_A Thiopurine S-methyltran 99.6 7.9E-16 2.7E-20 128.7 7.3 81 163-244 21-115 (203)
3 4gek_A TRNA (CMO5U34)-methyltr 99.6 7.4E-15 2.5E-19 128.0 11.1 80 163-243 69-152 (261)
4 3f4k_A Putative methyltransfer 99.5 2.9E-14 9.9E-19 122.0 11.3 89 155-243 37-127 (257)
5 1vl5_A Unknown conserved prote 99.5 4.4E-14 1.5E-18 121.5 11.9 80 163-243 36-116 (260)
6 3p9n_A Possible methyltransfer 99.5 1.8E-14 6.3E-19 118.4 8.9 94 150-243 28-126 (189)
7 3kkz_A Uncharacterized protein 99.5 4.2E-14 1.4E-18 122.2 11.5 88 156-243 38-127 (267)
8 2pxx_A Uncharacterized protein 99.5 4.2E-14 1.4E-18 117.2 10.7 81 163-245 41-122 (215)
9 2xvm_A Tellurite resistance pr 99.5 6.8E-14 2.3E-18 114.7 11.5 80 163-243 31-110 (199)
10 3lcc_A Putative methyl chlorid 99.5 3E-14 1E-18 120.8 8.4 79 164-243 66-145 (235)
11 3m70_A Tellurite resistance pr 99.5 9.8E-14 3.4E-18 121.0 11.6 88 153-243 110-197 (286)
12 4hg2_A Methyltransferase type 99.5 1.6E-14 5.6E-19 125.6 6.3 74 163-243 38-112 (257)
13 3ofk_A Nodulation protein S; N 99.5 5.2E-14 1.8E-18 117.5 9.1 79 163-244 50-128 (216)
14 1nkv_A Hypothetical protein YJ 99.5 1.5E-13 5E-18 117.5 12.0 81 163-243 35-116 (256)
15 2p7i_A Hypothetical protein; p 99.5 6.4E-14 2.2E-18 118.4 9.3 84 155-243 33-116 (250)
16 1xxl_A YCGJ protein; structura 99.5 1.4E-13 4.8E-18 117.2 11.3 80 163-243 20-100 (239)
17 3gdh_A Trimethylguanosine synt 99.5 3.7E-14 1.3E-18 120.6 7.7 89 155-244 69-158 (241)
18 3vc1_A Geranyl diphosphate 2-C 99.5 1.2E-13 4.2E-18 122.3 11.3 81 162-243 115-198 (312)
19 3jwh_A HEN1; methyltransferase 99.5 1.7E-13 5.7E-18 114.7 11.2 81 163-243 28-115 (217)
20 3ou2_A SAM-dependent methyltra 99.5 1.4E-13 4.8E-18 114.4 10.4 85 154-243 36-120 (218)
21 3jwg_A HEN1, methyltransferase 99.5 1.7E-13 5.9E-18 114.7 10.8 81 163-243 28-115 (219)
22 3dtn_A Putative methyltransfer 99.5 1.4E-13 4.8E-18 116.2 10.3 85 157-243 37-122 (234)
23 4azs_A Methyltransferase WBDD; 99.5 4.4E-14 1.5E-18 135.6 7.6 81 163-244 65-148 (569)
24 3mti_A RRNA methylase; SAM-dep 99.5 2.1E-13 7.2E-18 111.2 10.1 74 163-237 21-96 (185)
25 3grz_A L11 mtase, ribosomal pr 99.5 3.7E-13 1.3E-17 111.7 11.4 91 152-243 47-138 (205)
26 4htf_A S-adenosylmethionine-de 99.5 2.4E-13 8.1E-18 118.5 10.6 79 164-243 68-149 (285)
27 3lbf_A Protein-L-isoaspartate 99.5 4.2E-13 1.4E-17 111.6 11.3 81 163-244 76-157 (210)
28 3dh0_A SAM dependent methyltra 99.5 2.4E-13 8.3E-18 113.5 9.8 81 163-243 36-119 (219)
29 2o57_A Putative sarcosine dime 99.5 4.4E-13 1.5E-17 117.4 11.8 82 161-243 79-163 (297)
30 2ex4_A Adrenal gland protein A 99.5 1.3E-13 4.5E-18 117.3 8.2 80 164-243 79-159 (241)
31 2ift_A Putative methylase HI07 99.5 8.4E-14 2.9E-18 116.1 6.8 90 152-241 41-136 (201)
32 3gu3_A Methyltransferase; alph 99.4 3.1E-13 1E-17 118.2 10.3 82 161-243 19-102 (284)
33 2fpo_A Methylase YHHF; structu 99.4 1E-13 3.5E-18 115.7 6.8 90 152-241 42-133 (202)
34 2yqz_A Hypothetical protein TT 99.4 4.9E-13 1.7E-17 114.4 10.7 80 163-244 38-118 (263)
35 1y8c_A S-adenosylmethionine-de 99.4 4.1E-13 1.4E-17 113.4 10.1 78 164-243 37-115 (246)
36 3dlc_A Putative S-adenosyl-L-m 99.4 3.9E-13 1.3E-17 111.5 9.7 78 166-243 45-124 (219)
37 2fhp_A Methylase, putative; al 99.4 2.2E-13 7.5E-18 110.7 8.0 91 151-241 31-127 (187)
38 2esr_A Methyltransferase; stru 99.4 2.9E-13 1E-17 109.6 8.7 92 150-241 17-111 (177)
39 3bus_A REBM, methyltransferase 99.4 7.2E-13 2.5E-17 114.4 11.6 81 163-243 60-142 (273)
40 3mgg_A Methyltransferase; NYSG 99.4 5.2E-13 1.8E-17 115.6 10.7 81 163-243 36-118 (276)
41 3e23_A Uncharacterized protein 99.4 3.8E-13 1.3E-17 112.0 9.4 83 155-244 34-116 (211)
42 1ri5_A MRNA capping enzyme; me 99.4 4.6E-13 1.6E-17 116.6 10.3 82 163-244 63-147 (298)
43 2p8j_A S-adenosylmethionine-de 99.4 5.1E-13 1.7E-17 110.6 10.1 83 159-243 18-102 (209)
44 3g5l_A Putative S-adenosylmeth 99.4 5.5E-13 1.9E-17 114.0 10.6 78 163-243 43-121 (253)
45 3hem_A Cyclopropane-fatty-acyl 99.4 7.2E-13 2.5E-17 116.6 11.5 78 163-243 71-150 (302)
46 3g5t_A Trans-aconitate 3-methy 99.4 6.9E-13 2.4E-17 116.6 11.3 81 163-243 35-126 (299)
47 1wzn_A SAM-dependent methyltra 99.4 1.4E-12 4.7E-17 111.3 12.5 77 164-242 41-118 (252)
48 3hnr_A Probable methyltransfer 99.4 3.7E-13 1.3E-17 112.4 8.8 76 163-243 44-119 (220)
49 3pfg_A N-methyltransferase; N, 99.4 5.3E-13 1.8E-17 114.9 9.7 75 163-243 49-124 (263)
50 1dus_A MJ0882; hypothetical pr 99.4 1.6E-12 5.6E-17 105.5 12.0 91 150-242 39-131 (194)
51 3ujc_A Phosphoethanolamine N-m 99.4 6.1E-13 2.1E-17 113.8 9.5 78 163-243 54-133 (266)
52 1xtp_A LMAJ004091AAA; SGPP, st 99.4 5.3E-13 1.8E-17 113.8 8.8 79 163-243 92-171 (254)
53 1wy7_A Hypothetical protein PH 99.4 1.2E-12 4.2E-17 108.5 10.8 78 163-243 48-125 (207)
54 1ve3_A Hypothetical protein PH 99.4 1.7E-12 5.8E-17 108.6 11.7 79 163-243 37-116 (227)
55 3l8d_A Methyltransferase; stru 99.4 8E-13 2.7E-17 111.8 9.4 77 163-243 52-129 (242)
56 3sm3_A SAM-dependent methyltra 99.4 1.3E-12 4.3E-17 109.7 10.5 80 163-243 29-114 (235)
57 3njr_A Precorrin-6Y methylase; 99.4 2.2E-12 7.4E-17 107.9 11.7 77 163-240 54-132 (204)
58 3h2b_A SAM-dependent methyltra 99.4 6.5E-13 2.2E-17 109.7 8.3 73 165-243 42-115 (203)
59 1ne2_A Hypothetical protein TA 99.4 1.1E-12 3.7E-17 108.5 9.5 75 163-244 50-124 (200)
60 3g07_A 7SK snRNA methylphospha 99.4 6.5E-13 2.2E-17 116.9 8.4 83 163-245 45-192 (292)
61 3ggd_A SAM-dependent methyltra 99.4 2.2E-12 7.4E-17 109.7 11.2 79 162-244 54-138 (245)
62 3ccf_A Cyclopropane-fatty-acyl 99.4 1.6E-12 5.6E-17 113.0 10.6 84 153-243 47-130 (279)
63 3lpm_A Putative methyltransfer 99.4 1.3E-12 4.4E-17 112.8 9.9 91 153-243 37-132 (259)
64 3e05_A Precorrin-6Y C5,15-meth 99.4 3.4E-12 1.2E-16 105.8 12.0 79 163-241 39-119 (204)
65 2nxc_A L11 mtase, ribosomal pr 99.4 5.2E-13 1.8E-17 115.4 7.4 107 134-242 88-196 (254)
66 2kw5_A SLR1183 protein; struct 99.4 2.2E-12 7.4E-17 106.5 10.7 83 152-237 18-101 (202)
67 3g2m_A PCZA361.24; SAM-depende 99.4 9.8E-13 3.4E-17 115.6 9.1 79 164-243 82-164 (299)
68 1ws6_A Methyltransferase; stru 99.4 8.3E-13 2.8E-17 105.6 7.6 88 152-241 28-121 (171)
69 3bkw_A MLL3908 protein, S-aden 99.4 1.9E-12 6.5E-17 109.4 10.0 78 163-243 42-120 (243)
70 2y1w_A Histone-arginine methyl 99.4 2.8E-12 9.5E-17 115.8 11.7 80 163-243 49-129 (348)
71 2yxd_A Probable cobalt-precorr 99.4 1.9E-12 6.4E-17 104.4 9.5 84 153-239 25-109 (183)
72 2a14_A Indolethylamine N-methy 99.4 1.3E-13 4.6E-18 119.4 2.8 83 163-245 54-171 (263)
73 3q7e_A Protein arginine N-meth 99.4 3E-12 1E-16 115.7 11.4 80 163-243 65-146 (349)
74 3r0q_C Probable protein argini 99.4 2.4E-12 8.3E-17 117.5 10.8 80 163-243 62-142 (376)
75 1zx0_A Guanidinoacetate N-meth 99.4 9.7E-13 3.3E-17 111.8 7.6 76 163-239 59-138 (236)
76 3iv6_A Putative Zn-dependent a 99.4 1.5E-12 5.1E-17 113.5 8.9 74 163-243 44-123 (261)
77 4hc4_A Protein arginine N-meth 99.4 1.9E-12 6.4E-17 118.4 10.0 74 163-237 82-156 (376)
78 3fzg_A 16S rRNA methylase; met 99.4 8.3E-13 2.8E-17 109.8 6.8 78 163-243 48-128 (200)
79 3d2l_A SAM-dependent methyltra 99.4 3.3E-12 1.1E-16 107.9 10.7 78 163-243 32-110 (243)
80 2frn_A Hypothetical protein PH 99.4 2E-12 7E-17 113.2 9.7 77 163-239 124-201 (278)
81 3ocj_A Putative exported prote 99.4 1.1E-12 3.8E-17 115.7 7.9 81 163-243 117-200 (305)
82 3ege_A Putative methyltransfer 99.4 7.8E-13 2.7E-17 114.1 6.8 74 163-243 33-107 (261)
83 1vbf_A 231AA long hypothetical 99.4 3.2E-12 1.1E-16 107.7 10.4 78 163-243 69-147 (231)
84 1kpg_A CFA synthase;, cyclopro 99.4 3E-12 1E-16 111.5 10.4 78 163-243 63-142 (287)
85 3hm2_A Precorrin-6Y C5,15-meth 99.4 2.5E-12 8.5E-17 103.6 9.2 79 163-242 24-106 (178)
86 1yzh_A TRNA (guanine-N(7)-)-me 99.3 4.2E-12 1.4E-16 106.3 10.8 77 164-240 41-121 (214)
87 2yxe_A Protein-L-isoaspartate 99.3 3.6E-12 1.2E-16 106.3 10.3 81 163-243 76-159 (215)
88 3dmg_A Probable ribosomal RNA 99.3 3E-12 1E-16 117.3 10.6 90 151-242 215-310 (381)
89 2fyt_A Protein arginine N-meth 99.3 5.3E-12 1.8E-16 113.7 11.6 76 163-239 63-140 (340)
90 2vdw_A Vaccinia virus capping 99.3 2.7E-12 9.2E-17 114.0 9.5 80 164-243 48-142 (302)
91 3thr_A Glycine N-methyltransfe 99.3 2.7E-12 9.3E-17 112.0 9.3 81 163-244 56-145 (293)
92 1dl5_A Protein-L-isoaspartate 99.3 4.4E-12 1.5E-16 112.9 10.8 82 163-244 74-158 (317)
93 3eey_A Putative rRNA methylase 99.3 2.8E-12 9.5E-17 105.5 8.8 78 163-240 21-103 (197)
94 3gnl_A Uncharacterized protein 99.3 2.8E-12 9.5E-17 110.7 8.9 78 161-238 18-98 (244)
95 3lec_A NADB-rossmann superfami 99.3 3.2E-12 1.1E-16 109.3 9.2 78 161-238 18-98 (230)
96 3g89_A Ribosomal RNA small sub 99.3 2.1E-12 7.2E-17 111.5 8.1 77 163-239 79-160 (249)
97 2fk8_A Methoxy mycolic acid sy 99.3 4.6E-12 1.6E-16 112.1 10.5 78 163-243 89-168 (318)
98 4dcm_A Ribosomal RNA large sub 99.3 9.1E-12 3.1E-16 113.8 12.7 91 152-243 211-305 (375)
99 3dli_A Methyltransferase; PSI- 99.3 1E-12 3.5E-17 111.7 5.8 74 162-244 39-115 (240)
100 2p35_A Trans-aconitate 2-methy 99.3 6.1E-12 2.1E-16 107.4 10.7 76 163-243 32-108 (259)
101 3a27_A TYW2, uncharacterized p 99.3 8.4E-12 2.9E-16 109.0 11.5 83 158-240 113-196 (272)
102 2fca_A TRNA (guanine-N(7)-)-me 99.3 7.9E-12 2.7E-16 105.1 10.9 75 164-238 38-116 (213)
103 3htx_A HEN1; HEN1, small RNA m 99.3 4.2E-12 1.4E-16 125.1 10.3 82 163-244 720-810 (950)
104 1xdz_A Methyltransferase GIDB; 99.3 2.7E-12 9.2E-17 109.5 7.8 76 164-239 70-150 (240)
105 3bkx_A SAM-dependent methyltra 99.3 3.9E-12 1.3E-16 109.9 8.8 81 163-243 42-135 (275)
106 3kr9_A SAM-dependent methyltra 99.3 4.7E-12 1.6E-16 108.0 9.2 76 163-238 14-92 (225)
107 3fpf_A Mtnas, putative unchara 99.3 5.8E-12 2E-16 111.5 10.0 80 159-239 117-197 (298)
108 3bgv_A MRNA CAP guanine-N7 met 99.3 7.4E-12 2.5E-16 110.7 10.8 81 163-243 33-127 (313)
109 2pbf_A Protein-L-isoaspartate 99.3 8.1E-12 2.8E-16 105.1 10.5 90 154-243 69-175 (227)
110 3evz_A Methyltransferase; NYSG 99.3 1.2E-11 4.1E-16 104.1 11.4 80 163-243 54-136 (230)
111 1jsx_A Glucose-inhibited divis 99.3 8E-12 2.7E-16 103.4 10.1 75 164-238 65-140 (207)
112 2h00_A Methyltransferase 10 do 99.3 1E-11 3.6E-16 106.4 10.7 80 164-243 65-153 (254)
113 2gs9_A Hypothetical protein TT 99.3 5.3E-12 1.8E-16 104.8 8.5 72 164-243 36-108 (211)
114 3b3j_A Histone-arginine methyl 99.3 6.8E-12 2.3E-16 118.2 10.1 80 163-243 157-237 (480)
115 1l3i_A Precorrin-6Y methyltran 99.3 9.2E-12 3.2E-16 100.9 9.6 90 151-242 21-112 (192)
116 2b3t_A Protein methyltransfera 99.3 7.8E-12 2.7E-16 108.9 9.7 79 163-241 108-187 (276)
117 3dxy_A TRNA (guanine-N(7)-)-me 99.3 5.6E-12 1.9E-16 106.7 8.1 75 164-238 34-113 (218)
118 1jg1_A PIMT;, protein-L-isoasp 99.3 1.5E-11 5.2E-16 104.3 10.6 89 154-243 82-171 (235)
119 3cgg_A SAM-dependent methyltra 99.3 2.3E-11 8E-16 98.7 11.1 75 163-243 45-121 (195)
120 3bxo_A N,N-dimethyltransferase 99.3 9.8E-12 3.3E-16 104.8 9.0 75 163-243 39-114 (239)
121 1g6q_1 HnRNP arginine N-methyl 99.3 1.8E-11 6.1E-16 109.7 11.2 80 163-243 37-118 (328)
122 3ntv_A MW1564 protein; rossman 99.3 9.7E-12 3.3E-16 105.7 9.0 79 161-239 68-151 (232)
123 4fsd_A Arsenic methyltransfera 99.3 1.3E-11 4.3E-16 112.8 10.2 81 163-243 82-179 (383)
124 3tm4_A TRNA (guanine N2-)-meth 99.3 1E-11 3.5E-16 113.2 9.6 89 152-242 207-298 (373)
125 3i9f_A Putative type 11 methyl 99.3 6.2E-12 2.1E-16 100.9 7.1 72 163-243 16-88 (170)
126 3u81_A Catechol O-methyltransf 99.3 6.9E-12 2.4E-16 105.5 7.7 90 154-243 48-147 (221)
127 3q87_B N6 adenine specific DNA 99.3 6.8E-12 2.3E-16 101.8 7.2 70 163-243 22-91 (170)
128 1zq9_A Probable dimethyladenos 99.3 1.7E-11 5.7E-16 107.9 10.2 77 163-241 27-104 (285)
129 3k6r_A Putative transferase PH 99.3 1.1E-11 3.8E-16 108.9 8.9 77 162-238 123-200 (278)
130 2h1r_A Dimethyladenosine trans 99.3 1.3E-11 4.3E-16 109.4 9.3 77 163-241 41-117 (299)
131 1uwv_A 23S rRNA (uracil-5-)-me 99.3 1.9E-11 6.6E-16 113.5 10.9 104 134-238 253-364 (433)
132 2ozv_A Hypothetical protein AT 99.3 1.8E-11 6.1E-16 106.1 9.8 82 161-242 33-127 (260)
133 1nv8_A HEMK protein; class I a 99.3 2E-11 6.7E-16 107.4 10.0 76 164-240 123-202 (284)
134 1r18_A Protein-L-isoaspartate( 99.2 1.3E-11 4.5E-16 104.1 8.3 90 154-243 73-176 (227)
135 4dzr_A Protein-(glutamine-N5) 99.2 1.7E-12 5.7E-17 107.3 2.5 79 163-242 29-113 (215)
136 2jjq_A Uncharacterized RNA met 99.2 3.5E-11 1.2E-15 111.7 11.6 103 134-239 260-362 (425)
137 1i1n_A Protein-L-isoaspartate 99.2 3.5E-11 1.2E-15 101.1 10.5 90 154-243 66-164 (226)
138 3ckk_A TRNA (guanine-N(7)-)-me 99.2 2.5E-11 8.5E-16 103.9 9.6 75 164-238 46-131 (235)
139 3duw_A OMT, O-methyltransferas 99.2 9.7E-12 3.3E-16 104.3 6.9 91 150-240 44-143 (223)
140 3orh_A Guanidinoacetate N-meth 99.2 9.9E-12 3.4E-16 106.1 6.9 76 163-239 59-137 (236)
141 3m33_A Uncharacterized protein 99.2 4.4E-11 1.5E-15 100.9 10.7 69 163-237 47-118 (226)
142 3tma_A Methyltransferase; thum 99.2 2.8E-11 9.7E-16 109.2 10.1 82 161-242 200-284 (354)
143 3gru_A Dimethyladenosine trans 99.2 2.5E-11 8.6E-16 107.5 9.2 86 152-241 39-125 (295)
144 2i62_A Nicotinamide N-methyltr 99.2 5.5E-12 1.9E-16 107.9 4.5 82 163-244 55-171 (265)
145 3tr6_A O-methyltransferase; ce 99.2 1.3E-11 4.6E-16 103.5 6.7 88 152-239 52-149 (225)
146 3frh_A 16S rRNA methylase; met 99.2 5.7E-11 1.9E-15 102.1 10.5 78 163-243 104-181 (253)
147 2vdv_E TRNA (guanine-N(7)-)-me 99.2 4.7E-11 1.6E-15 102.2 10.0 75 163-237 48-135 (246)
148 1fbn_A MJ fibrillarin homologu 99.2 5E-11 1.7E-15 100.9 10.1 72 163-236 73-149 (230)
149 3uwp_A Histone-lysine N-methyl 99.2 2.4E-11 8.1E-16 111.9 8.6 80 162-241 171-263 (438)
150 1nt2_A Fibrillarin-like PRE-rR 99.2 5.5E-11 1.9E-15 99.9 10.3 73 163-237 56-133 (210)
151 3tfw_A Putative O-methyltransf 99.2 1.9E-11 6.5E-16 105.0 7.5 89 151-239 50-145 (248)
152 3mb5_A SAM-dependent methyltra 99.2 5.8E-11 2E-15 101.5 10.5 77 162-238 91-170 (255)
153 2igt_A SAM dependent methyltra 99.2 1.9E-11 6.4E-16 110.0 7.8 84 155-239 144-234 (332)
154 3dr5_A Putative O-methyltransf 99.2 1.9E-11 6.3E-16 103.7 7.3 89 151-239 40-138 (221)
155 3e8s_A Putative SAM dependent 99.2 2.1E-11 7.2E-16 101.5 7.4 72 163-241 51-127 (227)
156 3bzb_A Uncharacterized protein 99.2 6.2E-11 2.1E-15 103.8 10.6 81 163-243 78-176 (281)
157 2pjd_A Ribosomal RNA small sub 99.2 4.3E-11 1.5E-15 107.7 9.8 89 151-242 184-273 (343)
158 2b78_A Hypothetical protein SM 99.2 1.9E-11 6.6E-16 111.9 7.6 78 163-240 211-295 (385)
159 2avn_A Ubiquinone/menaquinone 99.2 5.6E-11 1.9E-15 102.2 9.8 73 164-243 54-127 (260)
160 3ajd_A Putative methyltransfer 99.2 3.8E-11 1.3E-15 104.7 8.6 87 153-239 72-165 (274)
161 1ixk_A Methyltransferase; open 99.2 4.2E-11 1.5E-15 106.7 8.9 89 151-239 105-196 (315)
162 1o9g_A RRNA methyltransferase; 99.2 1.7E-11 5.8E-16 105.0 6.0 80 164-243 51-181 (250)
163 3cc8_A Putative methyltransfer 99.2 6.5E-11 2.2E-15 98.7 9.1 73 163-243 31-106 (230)
164 3c0k_A UPF0064 protein YCCW; P 99.2 3.7E-11 1.3E-15 110.2 8.0 81 159-239 215-302 (396)
165 2aot_A HMT, histamine N-methyl 99.2 5E-11 1.7E-15 104.4 8.5 80 164-243 52-148 (292)
166 1yb2_A Hypothetical protein TA 99.2 1E-10 3.4E-15 101.8 10.2 75 163-237 109-186 (275)
167 2r6z_A UPF0341 protein in RSP 99.2 1.1E-11 3.9E-16 107.7 4.1 81 161-242 80-173 (258)
168 2r3s_A Uncharacterized protein 99.2 8.9E-11 3.1E-15 104.3 9.9 80 163-243 164-245 (335)
169 3bt7_A TRNA (uracil-5-)-methyl 99.2 4.1E-11 1.4E-15 109.0 7.8 103 135-238 182-303 (369)
170 2as0_A Hypothetical protein PH 99.2 5.3E-11 1.8E-15 109.1 8.3 83 157-239 209-298 (396)
171 3dp7_A SAM-dependent methyltra 99.2 1.1E-10 3.9E-15 105.6 10.3 79 164-243 179-261 (363)
172 2pwy_A TRNA (adenine-N(1)-)-me 99.2 2E-10 6.8E-15 98.0 11.1 76 162-237 94-173 (258)
173 2yx1_A Hypothetical protein MJ 99.2 1.4E-10 4.9E-15 104.2 10.6 72 163-238 194-266 (336)
174 2qm3_A Predicted methyltransfe 99.1 1E-10 3.5E-15 106.4 9.7 78 163-241 171-252 (373)
175 1sui_A Caffeoyl-COA O-methyltr 99.1 5E-11 1.7E-15 102.6 7.1 89 151-239 66-165 (247)
176 3p2e_A 16S rRNA methylase; met 99.1 3.8E-11 1.3E-15 102.0 6.2 76 163-238 23-105 (225)
177 1qzz_A RDMB, aclacinomycin-10- 99.1 1.8E-10 6.2E-15 104.0 11.0 79 163-243 181-261 (374)
178 2g72_A Phenylethanolamine N-me 99.1 4E-11 1.4E-15 104.7 6.4 80 164-243 71-187 (289)
179 3mcz_A O-methyltransferase; ad 99.1 1.5E-10 5.3E-15 103.8 10.3 78 165-243 180-261 (352)
180 1vlm_A SAM-dependent methyltra 99.1 7.6E-11 2.6E-15 98.8 7.6 68 164-243 47-115 (219)
181 2gpy_A O-methyltransferase; st 99.1 9.8E-11 3.3E-15 99.0 8.3 78 163-240 53-136 (233)
182 2qe6_A Uncharacterized protein 99.1 1.9E-10 6.7E-15 100.5 10.3 78 164-243 77-170 (274)
183 3lcv_B Sisomicin-gentamicin re 99.1 7E-11 2.4E-15 102.6 7.2 80 163-243 131-211 (281)
184 2b9e_A NOL1/NOP2/SUN domain fa 99.1 3.3E-10 1.1E-14 100.9 11.5 90 150-239 88-183 (309)
185 3tqs_A Ribosomal RNA small sub 99.1 1.7E-10 5.9E-15 100.1 9.3 81 154-239 20-105 (255)
186 2hnk_A SAM-dependent O-methylt 99.1 8.7E-11 3E-15 99.9 7.3 86 156-241 52-158 (239)
187 3c3p_A Methyltransferase; NP_9 99.1 7.4E-11 2.5E-15 98.2 6.6 86 152-238 44-134 (210)
188 1g8a_A Fibrillarin-like PRE-rR 99.1 2.9E-10 1E-14 95.6 10.3 75 163-239 72-152 (227)
189 2ipx_A RRNA 2'-O-methyltransfe 99.1 2.4E-10 8.3E-15 96.6 9.8 75 163-239 76-156 (233)
190 3ldu_A Putative methylase; str 99.1 2E-10 7E-15 105.2 9.9 79 163-241 194-312 (385)
191 3r3h_A O-methyltransferase, SA 99.1 1.7E-11 5.9E-16 105.2 2.5 88 152-239 48-145 (242)
192 3mq2_A 16S rRNA methyltransfer 99.1 8.8E-11 3E-15 98.1 6.7 73 163-236 26-104 (218)
193 2yvl_A TRMI protein, hypotheti 99.1 4.4E-10 1.5E-14 95.3 11.2 74 163-237 90-165 (248)
194 3k0b_A Predicted N6-adenine-sp 99.1 2.6E-10 9.1E-15 104.7 10.4 79 162-240 199-317 (393)
195 3v97_A Ribosomal RNA large sub 99.1 1.2E-10 4.1E-15 114.4 8.5 86 154-239 529-618 (703)
196 2avd_A Catechol-O-methyltransf 99.1 1E-10 3.5E-15 98.3 7.0 86 154-239 59-154 (229)
197 1u2z_A Histone-lysine N-methyl 99.1 2.8E-10 9.7E-15 105.7 10.6 78 163-240 241-333 (433)
198 1af7_A Chemotaxis receptor met 99.1 1.7E-10 5.7E-15 101.2 8.5 80 164-243 105-226 (274)
199 1m6y_A S-adenosyl-methyltransf 99.1 1E-10 3.4E-15 103.9 7.0 84 154-239 17-107 (301)
200 3c3y_A Pfomt, O-methyltransfer 99.1 1.5E-10 5.2E-15 98.8 7.9 87 152-238 58-155 (237)
201 1tw3_A COMT, carminomycin 4-O- 99.1 3.6E-10 1.2E-14 101.7 10.6 79 163-243 182-262 (360)
202 1o54_A SAM-dependent O-methylt 99.1 4.4E-10 1.5E-14 97.6 10.8 76 162-237 110-188 (277)
203 1i9g_A Hypothetical protein RV 99.1 3.5E-10 1.2E-14 97.9 10.1 76 162-237 97-178 (280)
204 1wxx_A TT1595, hypothetical pr 99.1 1E-10 3.5E-15 106.8 7.0 82 156-239 202-288 (382)
205 1p91_A Ribosomal RNA large sub 99.1 2.8E-10 9.7E-15 98.0 9.2 73 163-240 84-158 (269)
206 3i53_A O-methyltransferase; CO 99.1 3.9E-10 1.3E-14 100.5 10.3 78 164-243 169-248 (332)
207 1x19_A CRTF-related protein; m 99.1 4.5E-10 1.5E-14 101.2 10.8 79 163-243 189-269 (359)
208 3ldg_A Putative uncharacterize 99.1 3.8E-10 1.3E-14 103.4 10.3 80 162-241 192-311 (384)
209 4df3_A Fibrillarin-like rRNA/T 99.1 5.2E-10 1.8E-14 95.8 10.3 74 163-238 76-155 (233)
210 3ll7_A Putative methyltransfer 99.1 1.4E-10 4.9E-15 106.9 7.2 76 164-240 93-173 (410)
211 2b25_A Hypothetical protein; s 99.1 5.5E-10 1.9E-14 99.9 10.4 83 155-238 97-195 (336)
212 2f8l_A Hypothetical protein LM 99.1 8.1E-10 2.8E-14 99.3 11.4 80 163-243 129-214 (344)
213 3fut_A Dimethyladenosine trans 99.1 3.3E-10 1.1E-14 99.2 8.2 84 152-241 36-121 (271)
214 3gwz_A MMCR; methyltransferase 99.1 8E-10 2.7E-14 100.2 11.0 79 163-243 201-281 (369)
215 2frx_A Hypothetical protein YE 99.1 5.9E-10 2E-14 104.9 10.4 89 150-238 101-195 (479)
216 3id6_C Fibrillarin-like rRNA/T 99.0 1.2E-09 4.2E-14 93.4 11.3 77 162-240 74-156 (232)
217 4dmg_A Putative uncharacterize 99.0 3.4E-10 1.2E-14 104.0 8.3 81 157-239 206-289 (393)
218 3cbg_A O-methyltransferase; cy 99.0 2.2E-10 7.5E-15 97.3 6.4 88 152-239 60-157 (232)
219 2ip2_A Probable phenazine-spec 99.0 3.3E-10 1.1E-14 100.8 7.4 76 166-243 169-246 (334)
220 3m4x_A NOL1/NOP2/SUN family pr 99.0 3.2E-10 1.1E-14 106.1 7.2 90 150-239 91-184 (456)
221 3adn_A Spermidine synthase; am 99.0 5.6E-10 1.9E-14 98.7 8.0 78 163-240 82-167 (294)
222 2yxl_A PH0851 protein, 450AA l 99.0 1.4E-09 4.7E-14 101.5 11.0 86 153-238 248-338 (450)
223 1qam_A ERMC' methyltransferase 99.0 1E-09 3.5E-14 94.2 9.2 73 163-239 29-103 (244)
224 1ej0_A FTSJ; methyltransferase 99.0 3.5E-10 1.2E-14 89.9 5.6 71 162-243 20-101 (180)
225 4e2x_A TCAB9; kijanose, tetron 99.0 8.7E-11 3E-15 107.9 2.3 77 163-244 106-185 (416)
226 3m6w_A RRNA methylase; rRNA me 99.0 6.2E-10 2.1E-14 104.3 7.9 89 150-239 87-179 (464)
227 2plw_A Ribosomal RNA methyltra 99.0 1.2E-09 4.1E-14 89.8 8.1 70 163-243 21-119 (201)
228 3ftd_A Dimethyladenosine trans 99.0 6.2E-10 2.1E-14 96.1 6.6 73 163-240 30-105 (249)
229 3giw_A Protein of unknown func 99.0 7.3E-10 2.5E-14 97.0 6.8 82 164-245 78-175 (277)
230 3uzu_A Ribosomal RNA small sub 99.0 1E-09 3.4E-14 96.4 7.7 79 154-238 33-122 (279)
231 3bwc_A Spermidine synthase; SA 99.0 1.1E-09 3.8E-14 97.0 7.6 79 163-241 94-180 (304)
232 1mjf_A Spermidine synthase; sp 98.9 1.1E-09 3.7E-14 96.0 7.2 77 163-240 74-162 (281)
233 1iy9_A Spermidine synthase; ro 98.9 1.9E-09 6.4E-14 94.3 8.0 77 164-240 75-158 (275)
234 1xj5_A Spermidine synthase 1; 98.9 2E-09 6.8E-14 96.8 8.3 77 163-239 119-203 (334)
235 1uir_A Polyamine aminopropyltr 98.9 1.4E-09 4.7E-14 96.9 7.1 79 164-242 77-163 (314)
236 3hp7_A Hemolysin, putative; st 98.9 9E-10 3.1E-14 97.3 5.7 76 163-243 84-164 (291)
237 3dou_A Ribosomal RNA large sub 98.9 2.3E-09 7.8E-14 88.7 7.7 66 163-240 24-101 (191)
238 2dul_A N(2),N(2)-dimethylguano 98.9 1.3E-09 4.5E-14 99.6 6.6 75 164-238 47-139 (378)
239 1inl_A Spermidine synthase; be 98.9 1.9E-09 6.4E-14 95.3 7.4 76 164-239 90-172 (296)
240 2okc_A Type I restriction enzy 98.9 2.3E-09 7.8E-14 99.8 8.3 93 150-243 158-266 (445)
241 2pt6_A Spermidine synthase; tr 98.9 1.4E-09 4.9E-14 97.2 6.5 76 163-238 115-197 (321)
242 2o07_A Spermidine synthase; st 98.9 2.2E-09 7.6E-14 95.2 7.3 78 163-240 94-178 (304)
243 2bm8_A Cephalosporin hydroxyla 98.9 7.3E-10 2.5E-14 94.6 4.0 71 164-239 81-161 (236)
244 3opn_A Putative hemolysin; str 98.9 1.7E-10 5.8E-15 98.6 -0.0 45 163-207 36-80 (232)
245 3gjy_A Spermidine synthase; AP 98.9 2.3E-09 7.9E-14 95.7 7.3 75 166-240 91-169 (317)
246 2zfu_A Nucleomethylin, cerebra 98.9 1.4E-09 4.7E-14 90.5 5.2 69 155-242 58-127 (215)
247 1sqg_A SUN protein, FMU protei 98.9 5.9E-09 2E-13 96.5 9.7 83 155-238 237-323 (429)
248 1yub_A Ermam, rRNA methyltrans 98.9 1.5E-10 5.1E-15 99.2 -1.1 72 163-238 28-101 (245)
249 1fp1_D Isoliquiritigenin 2'-O- 98.9 3.1E-09 1.1E-13 96.3 7.4 72 163-243 208-280 (372)
250 2i7c_A Spermidine synthase; tr 98.9 2.7E-09 9.3E-14 93.6 6.7 77 163-239 77-160 (283)
251 2wa2_A Non-structural protein 98.9 5.4E-10 1.8E-14 98.0 2.1 73 163-239 81-157 (276)
252 2oxt_A Nucleoside-2'-O-methylt 98.9 6.2E-10 2.1E-14 97.0 2.4 72 163-239 73-149 (265)
253 3axs_A Probable N(2),N(2)-dime 98.8 2.5E-09 8.7E-14 98.1 6.2 75 164-238 52-133 (392)
254 1fp2_A Isoflavone O-methyltran 98.8 3E-09 1E-13 95.6 6.6 72 163-243 187-259 (352)
255 1qyr_A KSGA, high level kasuga 98.8 1.6E-09 5.5E-14 93.7 4.5 80 154-239 12-99 (252)
256 2oyr_A UPF0341 protein YHIQ; a 98.8 3.2E-09 1.1E-13 92.2 6.5 79 163-242 85-176 (258)
257 2b2c_A Spermidine synthase; be 98.8 3E-09 1E-13 94.8 5.7 77 163-239 107-190 (314)
258 2nyu_A Putative ribosomal RNA 98.8 4.5E-09 1.5E-13 85.8 6.2 69 163-242 21-109 (196)
259 2ih2_A Modification methylase 98.8 3.9E-09 1.3E-13 96.7 5.2 81 152-242 28-110 (421)
260 3reo_A (ISO)eugenol O-methyltr 98.8 6.8E-09 2.3E-13 94.2 6.4 72 163-243 202-274 (368)
261 2cmg_A Spermidine synthase; tr 98.8 5.9E-09 2E-13 90.6 5.5 71 164-237 72-146 (262)
262 4a6d_A Hydroxyindole O-methylt 98.8 2.1E-08 7.2E-13 90.5 9.3 79 163-243 178-257 (353)
263 3v97_A Ribosomal RNA large sub 98.8 2.8E-08 9.5E-13 97.6 10.6 79 163-241 189-314 (703)
264 3p9c_A Caffeic acid O-methyltr 98.8 1E-08 3.4E-13 93.0 6.8 73 162-243 199-272 (364)
265 3lst_A CALO1 methyltransferase 98.7 7.3E-09 2.5E-13 93.0 5.2 76 163-243 183-260 (348)
266 1zg3_A Isoflavanone 4'-O-methy 98.7 1.3E-08 4.6E-13 91.6 6.3 71 164-243 193-264 (358)
267 2p41_A Type II methyltransfera 98.7 5.2E-09 1.8E-13 92.9 2.9 74 163-241 81-159 (305)
268 3lkd_A Type I restriction-modi 98.6 8.9E-08 3E-12 91.3 9.2 93 149-241 203-308 (542)
269 2qfm_A Spermine synthase; sper 98.6 4.3E-08 1.5E-12 88.9 6.4 76 164-239 188-276 (364)
270 3sso_A Methyltransferase; macr 98.6 6.4E-08 2.2E-12 88.9 6.2 67 164-239 216-297 (419)
271 2ar0_A M.ecoki, type I restric 98.5 8.8E-08 3E-12 91.4 6.7 93 150-243 156-274 (541)
272 4gqb_A Protein arginine N-meth 98.5 9.7E-08 3.3E-12 92.4 6.2 71 165-236 358-434 (637)
273 2ld4_A Anamorsin; methyltransf 98.5 6E-08 2.1E-12 78.1 3.1 62 163-243 11-76 (176)
274 2k4m_A TR8_protein, UPF0146 pr 98.4 1.4E-07 4.9E-12 74.7 4.0 67 154-236 24-95 (153)
275 3cvo_A Methyltransferase-like 98.4 1.6E-06 5.6E-11 72.4 9.3 74 164-239 30-131 (202)
276 1wg8_A Predicted S-adenosylmet 98.3 5.9E-07 2E-11 78.6 6.6 79 154-238 13-97 (285)
277 3khk_A Type I restriction-modi 98.3 4.4E-07 1.5E-11 86.6 5.7 92 149-242 231-341 (544)
278 2xyq_A Putative 2'-O-methyl tr 98.3 1.1E-06 3.8E-11 77.4 6.7 63 163-240 62-133 (290)
279 3ua3_A Protein arginine N-meth 98.2 7.3E-07 2.5E-11 86.7 5.2 71 165-236 410-501 (745)
280 2zig_A TTHA0409, putative modi 98.2 4.7E-06 1.6E-10 73.2 8.4 47 163-210 234-280 (297)
281 3s1s_A Restriction endonucleas 98.2 2.8E-06 9.6E-11 83.8 7.5 93 149-241 301-410 (878)
282 4auk_A Ribosomal RNA large sub 98.1 3.1E-06 1.1E-10 76.7 6.7 72 162-241 209-281 (375)
283 3ufb_A Type I restriction-modi 98.0 1.2E-05 4E-10 76.5 8.2 92 149-241 203-313 (530)
284 3o4f_A Spermidine synthase; am 98.0 4.8E-05 1.7E-09 67.0 10.7 76 163-238 82-165 (294)
285 4fzv_A Putative methyltransfer 98.0 1.8E-05 6.1E-10 71.7 8.0 91 151-241 135-234 (359)
286 1g60_A Adenine-specific methyl 97.7 5E-05 1.7E-09 65.4 6.9 49 163-212 211-259 (260)
287 3evf_A RNA-directed RNA polyme 97.7 1.3E-05 4.3E-10 69.8 2.4 77 163-241 73-151 (277)
288 3gcz_A Polyprotein; flavivirus 97.7 1.3E-05 4.6E-10 69.8 2.1 76 163-241 89-167 (282)
289 3p8z_A Mtase, non-structural p 97.6 1.6E-05 5.5E-10 67.7 1.7 74 163-238 77-152 (267)
290 2wk1_A NOVP; transferase, O-me 97.5 0.00021 7.1E-09 62.6 7.8 77 163-239 105-218 (282)
291 3tka_A Ribosomal RNA small sub 97.5 0.00028 9.6E-09 63.1 7.7 80 154-238 48-136 (347)
292 3lkz_A Non-structural protein 97.4 0.00017 5.7E-09 63.3 5.6 75 163-239 93-169 (321)
293 3c6k_A Spermine synthase; sper 97.3 0.00028 9.6E-09 64.1 6.5 76 163-238 204-292 (381)
294 1i4w_A Mitochondrial replicati 97.3 0.00041 1.4E-08 62.6 7.5 74 150-226 39-118 (353)
295 2qy6_A UPF0209 protein YFCK; s 97.2 0.00022 7.5E-09 61.5 4.0 75 164-238 60-181 (257)
296 3b5i_A S-adenosyl-L-methionine 97.1 0.0013 4.3E-08 59.8 8.5 84 164-247 52-167 (374)
297 3g7u_A Cytosine-specific methy 97.0 0.0012 4.3E-08 59.8 7.2 72 166-242 3-83 (376)
298 1g55_A DNA cytosine methyltran 97.0 0.00058 2E-08 61.2 4.9 73 166-243 3-81 (343)
299 2c7p_A Modification methylase 97.0 0.0019 6.6E-08 57.5 8.0 73 164-243 10-84 (327)
300 1boo_A Protein (N-4 cytosine-s 96.9 0.0002 6.9E-09 63.6 1.1 61 163-225 251-311 (323)
301 3eld_A Methyltransferase; flav 96.9 0.00034 1.2E-08 61.4 2.4 76 163-241 80-158 (300)
302 2efj_A 3,7-dimethylxanthine me 96.9 0.0031 1.1E-07 57.4 8.5 81 165-248 53-167 (384)
303 2px2_A Genome polyprotein [con 96.5 0.00057 2E-08 58.8 1.1 74 163-239 72-148 (269)
304 2py6_A Methyltransferase FKBM; 96.5 0.0066 2.3E-07 55.5 8.0 63 162-224 224-293 (409)
305 1m6e_X S-adenosyl-L-methionnin 96.4 0.0018 6.2E-08 58.5 3.8 85 164-248 51-157 (359)
306 1eg2_A Modification methylase 96.4 0.0049 1.7E-07 54.6 6.2 48 163-211 241-291 (319)
307 2oo3_A Protein involved in cat 96.3 0.0008 2.7E-08 58.7 0.6 75 164-241 91-170 (283)
308 3ubt_Y Modification methylase 96.2 0.009 3.1E-07 52.5 6.9 70 167-242 2-73 (331)
309 2qrv_A DNA (cytosine-5)-methyl 96.1 0.028 9.6E-07 49.2 9.6 76 163-243 14-96 (295)
310 4h0n_A DNMT2; SAH binding, tra 95.3 0.025 8.5E-07 50.4 6.2 73 166-243 4-82 (333)
311 3qv2_A 5-cytosine DNA methyltr 95.2 0.032 1.1E-06 49.6 6.5 74 164-243 9-89 (327)
312 3r24_A NSP16, 2'-O-methyl tran 94.3 0.09 3.1E-06 46.2 6.6 66 163-242 108-181 (344)
313 3me5_A Cytosine-specific methy 94.1 0.043 1.5E-06 51.3 4.7 77 165-243 88-182 (482)
314 1zkd_A DUF185; NESG, RPR58, st 94.0 0.15 5.3E-06 46.2 8.0 77 165-246 81-165 (387)
315 4f3n_A Uncharacterized ACR, CO 92.9 0.17 5.7E-06 46.7 6.3 76 165-246 138-223 (432)
316 3llv_A Exopolyphosphatase-rela 92.3 0.52 1.8E-05 35.4 7.6 62 165-236 6-76 (141)
317 1rjd_A PPM1P, carboxy methyl t 92.0 0.43 1.5E-05 42.3 7.7 79 164-243 97-207 (334)
318 4fn4_A Short chain dehydrogena 91.7 0.75 2.6E-05 39.1 8.6 75 163-239 5-93 (254)
319 2dph_A Formaldehyde dismutase; 90.9 0.29 9.9E-06 44.0 5.5 45 161-205 182-228 (398)
320 3swr_A DNA (cytosine-5)-methyl 90.7 0.47 1.6E-05 48.1 7.3 74 165-243 540-631 (1002)
321 3o38_A Short chain dehydrogena 90.7 1.1 3.9E-05 37.3 8.8 77 163-240 20-111 (266)
322 1f8f_A Benzyl alcohol dehydrog 90.6 0.42 1.4E-05 42.3 6.2 46 161-206 187-234 (371)
323 4ft4_B DNA (cytosine-5)-methyl 90.5 0.46 1.6E-05 46.7 7.0 44 164-207 211-260 (784)
324 3ucx_A Short chain dehydrogena 89.6 2 7E-05 35.8 9.5 74 163-238 9-96 (264)
325 3o26_A Salutaridine reductase; 89.4 1.3 4.5E-05 37.4 8.2 76 164-240 11-101 (311)
326 1kol_A Formaldehyde dehydrogen 89.2 0.58 2E-05 41.8 6.0 45 161-205 182-228 (398)
327 3tjr_A Short chain dehydrogena 89.0 1.9 6.3E-05 37.0 9.0 76 163-240 29-118 (301)
328 3qiv_A Short-chain dehydrogena 88.9 1.9 6.5E-05 35.5 8.7 75 164-240 8-96 (253)
329 3fwz_A Inner membrane protein 88.7 0.72 2.5E-05 34.9 5.5 64 165-236 7-77 (140)
330 1pl8_A Human sorbitol dehydrog 88.7 0.68 2.3E-05 40.8 6.0 45 161-205 168-214 (356)
331 4g81_D Putative hexonate dehyd 88.4 0.88 3E-05 38.6 6.4 76 163-240 7-96 (255)
332 3h7a_A Short chain dehydrogena 88.4 1.3 4.4E-05 36.9 7.4 75 164-240 6-93 (252)
333 3two_A Mannitol dehydrogenase; 88.4 0.72 2.5E-05 40.4 5.9 66 161-236 173-240 (348)
334 3lyl_A 3-oxoacyl-(acyl-carrier 88.2 2 6.9E-05 35.2 8.4 75 164-240 4-92 (247)
335 4fs3_A Enoyl-[acyl-carrier-pro 88.1 1.4 4.8E-05 36.9 7.4 76 163-239 4-95 (256)
336 3pk0_A Short-chain dehydrogena 87.9 1.9 6.5E-05 36.0 8.1 76 164-240 9-98 (262)
337 3s2e_A Zinc-containing alcohol 87.7 0.97 3.3E-05 39.4 6.3 44 161-205 163-208 (340)
338 3fpc_A NADP-dependent alcohol 87.2 0.97 3.3E-05 39.6 6.1 46 161-206 163-210 (352)
339 3rkr_A Short chain oxidoreduct 87.1 2.3 8E-05 35.4 8.2 75 164-240 28-116 (262)
340 3sju_A Keto reductase; short-c 86.9 2.6 8.8E-05 35.6 8.5 75 164-240 23-111 (279)
341 3gaf_A 7-alpha-hydroxysteroid 86.8 2.6 8.9E-05 35.0 8.3 76 163-240 10-99 (256)
342 3lf2_A Short chain oxidoreduct 86.8 3.4 0.00012 34.4 9.1 77 163-240 6-97 (265)
343 3jv7_A ADH-A; dehydrogenase, n 86.7 1.2 4.2E-05 38.8 6.5 46 161-206 168-215 (345)
344 1xu9_A Corticosteroid 11-beta- 86.3 2.4 8.3E-05 35.7 7.9 72 164-237 27-113 (286)
345 3tfo_A Putative 3-oxoacyl-(acy 86.3 2.7 9.1E-05 35.4 8.2 75 164-240 3-91 (264)
346 3av4_A DNA (cytosine-5)-methyl 86.2 1.2 4.1E-05 46.5 6.9 75 164-243 850-942 (1330)
347 3nyw_A Putative oxidoreductase 86.1 3.2 0.00011 34.4 8.5 76 164-240 6-97 (250)
348 3goh_A Alcohol dehydrogenase, 85.7 1.3 4.5E-05 38.1 6.1 64 162-236 140-205 (315)
349 3imf_A Short chain dehydrogena 85.7 2.4 8.1E-05 35.2 7.5 74 164-239 5-92 (257)
350 3m6i_A L-arabinitol 4-dehydrog 85.7 1.2 4.2E-05 39.1 5.9 46 161-206 176-223 (363)
351 3awd_A GOX2181, putative polyo 85.5 4.3 0.00015 33.3 9.0 73 164-239 12-99 (260)
352 3e8x_A Putative NAD-dependent 85.5 2.7 9.4E-05 34.1 7.7 68 163-239 19-93 (236)
353 3sx2_A Putative 3-ketoacyl-(ac 85.3 3.9 0.00013 34.2 8.8 77 163-241 11-113 (278)
354 2jah_A Clavulanic acid dehydro 85.3 4.5 0.00015 33.3 9.0 75 164-240 6-94 (247)
355 3ius_A Uncharacterized conserv 85.2 3.1 0.00011 34.6 8.1 62 166-238 6-71 (286)
356 3v8b_A Putative dehydrogenase, 85.2 3.6 0.00012 34.9 8.5 75 164-240 27-115 (283)
357 3i1j_A Oxidoreductase, short c 85.1 3.4 0.00011 33.8 8.1 77 163-240 12-104 (247)
358 3svt_A Short-chain type dehydr 85.0 4.1 0.00014 34.2 8.7 77 163-240 9-101 (281)
359 3rih_A Short chain dehydrogena 85.0 1.8 6.1E-05 37.1 6.5 76 164-240 40-129 (293)
360 3ioy_A Short-chain dehydrogena 85.0 4.3 0.00015 35.0 9.0 76 164-240 7-97 (319)
361 3pxx_A Carveol dehydrogenase; 84.9 4.5 0.00015 33.8 9.0 75 164-240 9-109 (287)
362 1yb1_A 17-beta-hydroxysteroid 84.9 4.6 0.00016 33.7 9.0 73 164-239 30-117 (272)
363 3t7c_A Carveol dehydrogenase; 84.9 4.5 0.00015 34.4 9.0 76 163-240 26-127 (299)
364 3f1l_A Uncharacterized oxidore 84.8 3.3 0.00011 34.3 7.9 77 163-240 10-102 (252)
365 3pgx_A Carveol dehydrogenase; 84.8 4.5 0.00015 33.9 8.9 76 163-240 13-115 (280)
366 3r1i_A Short-chain type dehydr 84.7 2.7 9.1E-05 35.5 7.4 76 163-240 30-119 (276)
367 2rhc_B Actinorhodin polyketide 84.5 4.8 0.00016 33.8 9.0 75 164-240 21-109 (277)
368 1ae1_A Tropinone reductase-I; 84.5 5 0.00017 33.5 9.0 75 164-240 20-109 (273)
369 3uve_A Carveol dehydrogenase ( 84.5 4.6 0.00016 33.9 8.9 76 163-240 9-114 (286)
370 3c85_A Putative glutathione-re 84.4 2 7E-05 33.6 6.2 65 164-236 38-111 (183)
371 4ej6_A Putative zinc-binding d 84.4 1.6 5.3E-05 38.7 6.0 46 161-206 179-226 (370)
372 2ae2_A Protein (tropinone redu 84.3 4.8 0.00017 33.3 8.8 75 164-240 8-97 (260)
373 1iy8_A Levodione reductase; ox 84.3 4.6 0.00016 33.6 8.7 75 164-240 12-102 (267)
374 1zem_A Xylitol dehydrogenase; 84.2 5.2 0.00018 33.2 8.9 75 164-240 6-94 (262)
375 1y1p_A ARII, aldehyde reductas 84.1 7.2 0.00025 33.0 10.1 75 163-239 9-92 (342)
376 3ftp_A 3-oxoacyl-[acyl-carrier 84.1 3.4 0.00012 34.7 7.8 76 163-240 26-115 (270)
377 3oig_A Enoyl-[acyl-carrier-pro 83.8 4.2 0.00014 33.7 8.2 76 164-240 6-97 (266)
378 4dry_A 3-oxoacyl-[acyl-carrier 83.7 2.6 9.1E-05 35.6 7.0 76 164-240 32-121 (281)
379 1p0f_A NADP-dependent alcohol 83.5 1.2 4.2E-05 39.3 4.9 45 161-205 188-234 (373)
380 3l77_A Short-chain alcohol deh 83.2 4.6 0.00016 32.7 8.1 74 165-240 2-90 (235)
381 3uko_A Alcohol dehydrogenase c 83.1 1 3.5E-05 40.0 4.2 45 161-205 190-236 (378)
382 1cdo_A Alcohol dehydrogenase; 83.0 1.3 4.4E-05 39.2 4.9 45 161-205 189-235 (374)
383 4egf_A L-xylulose reductase; s 82.9 3.6 0.00012 34.3 7.5 75 164-240 19-108 (266)
384 3ai3_A NADPH-sorbose reductase 82.9 5.8 0.0002 32.8 8.7 75 164-240 6-95 (263)
385 1lss_A TRK system potassium up 82.9 8.1 0.00028 28.1 8.7 64 165-237 4-76 (140)
386 1e3j_A NADP(H)-dependent ketos 82.8 1.9 6.7E-05 37.6 5.9 44 161-205 165-210 (352)
387 2fzw_A Alcohol dehydrogenase c 82.8 1.4 4.8E-05 38.9 5.0 46 161-206 187-234 (373)
388 1pqw_A Polyketide synthase; ro 82.7 1.4 4.7E-05 35.0 4.5 43 162-205 36-81 (198)
389 4ibo_A Gluconate dehydrogenase 82.7 2.3 7.9E-05 35.8 6.2 76 163-240 24-113 (271)
390 3tsc_A Putative oxidoreductase 82.6 6.6 0.00023 32.8 9.0 76 163-240 9-111 (277)
391 3ip1_A Alcohol dehydrogenase, 82.6 2 6.8E-05 38.5 6.0 46 161-206 210-257 (404)
392 3cxt_A Dehydrogenase with diff 82.5 6.1 0.00021 33.6 8.8 74 164-239 33-120 (291)
393 4fc7_A Peroxisomal 2,4-dienoyl 82.3 4.6 0.00016 33.9 7.9 75 163-239 25-114 (277)
394 2uyo_A Hypothetical protein ML 82.3 8.6 0.00029 33.4 9.8 77 166-243 104-192 (310)
395 3uog_A Alcohol dehydrogenase; 82.2 2.2 7.7E-05 37.5 6.1 45 161-206 186-232 (363)
396 2jhf_A Alcohol dehydrogenase E 82.1 1.5 5E-05 38.8 4.9 45 161-205 188-234 (374)
397 3s55_A Putative short-chain de 82.1 7 0.00024 32.7 9.0 75 164-240 9-109 (281)
398 3tox_A Short chain dehydrogena 82.1 2.4 8.3E-05 35.9 6.1 74 164-239 7-94 (280)
399 4da9_A Short-chain dehydrogena 82.1 6.9 0.00024 32.9 9.0 76 163-240 27-117 (280)
400 4imr_A 3-oxoacyl-(acyl-carrier 82.1 2.8 9.5E-05 35.4 6.4 76 163-240 31-119 (275)
401 1xkq_A Short-chain reductase f 82.0 5.1 0.00017 33.6 8.1 76 164-240 5-96 (280)
402 1e3i_A Alcohol dehydrogenase, 81.8 1.5 5.2E-05 38.7 4.9 45 161-205 192-238 (376)
403 2qq5_A DHRS1, dehydrogenase/re 81.7 4.8 0.00017 33.3 7.8 72 164-238 4-91 (260)
404 3l9w_A Glutathione-regulated p 81.7 1.7 5.7E-05 39.5 5.2 62 165-236 4-74 (413)
405 4hp8_A 2-deoxy-D-gluconate 3-d 81.7 6.1 0.00021 33.3 8.4 74 163-240 7-89 (247)
406 1uuf_A YAHK, zinc-type alcohol 81.7 1.6 5.4E-05 38.7 4.9 44 161-205 191-236 (369)
407 1xg5_A ARPG836; short chain de 81.6 6.9 0.00024 32.6 8.8 75 164-240 31-121 (279)
408 4iin_A 3-ketoacyl-acyl carrier 81.6 5.8 0.0002 33.0 8.3 75 164-240 28-117 (271)
409 1fmc_A 7 alpha-hydroxysteroid 81.5 5.8 0.0002 32.3 8.1 73 164-239 10-97 (255)
410 2zat_A Dehydrogenase/reductase 81.5 6.3 0.00022 32.5 8.4 74 164-240 13-101 (260)
411 4g65_A TRK system potassium up 81.5 1.9 6.6E-05 39.7 5.6 62 166-236 4-74 (461)
412 1geg_A Acetoin reductase; SDR 81.5 7 0.00024 32.2 8.7 72 166-239 3-88 (256)
413 3l4b_C TRKA K+ channel protien 81.4 2.8 9.6E-05 33.9 6.0 61 167-236 2-71 (218)
414 3grk_A Enoyl-(acyl-carrier-pro 80.8 7.8 0.00027 32.8 9.0 75 163-240 29-119 (293)
415 2b4q_A Rhamnolipids biosynthes 80.7 4.1 0.00014 34.3 7.0 74 164-240 28-115 (276)
416 3oec_A Carveol dehydrogenase ( 80.7 6.5 0.00022 33.8 8.5 76 163-240 44-145 (317)
417 3ic5_A Putative saccharopine d 80.3 7.1 0.00024 27.4 7.4 65 165-238 5-77 (118)
418 1vl8_A Gluconate 5-dehydrogena 80.2 8.2 0.00028 32.1 8.8 76 163-240 19-109 (267)
419 2uvd_A 3-oxoacyl-(acyl-carrier 79.8 7.6 0.00026 31.7 8.3 74 164-240 3-92 (246)
420 1wma_A Carbonyl reductase [NAD 79.5 7.6 0.00026 31.7 8.3 73 164-239 3-91 (276)
421 4dmm_A 3-oxoacyl-[acyl-carrier 79.2 7.6 0.00026 32.4 8.2 75 164-240 27-116 (269)
422 4fgs_A Probable dehydrogenase 79.1 9.1 0.00031 32.6 8.7 73 163-240 27-113 (273)
423 3v2h_A D-beta-hydroxybutyrate 79.1 7.6 0.00026 32.7 8.2 77 163-240 23-114 (281)
424 1yxm_A Pecra, peroxisomal tran 78.9 10 0.00035 31.9 9.0 73 164-239 17-109 (303)
425 1xhl_A Short-chain dehydrogena 78.9 7.7 0.00026 33.0 8.3 75 164-240 25-116 (297)
426 3edm_A Short chain dehydrogena 78.8 7 0.00024 32.4 7.8 74 164-239 7-95 (259)
427 3oid_A Enoyl-[acyl-carrier-pro 78.7 7.3 0.00025 32.3 7.9 74 164-239 3-91 (258)
428 1xq1_A Putative tropinone redu 78.7 8.2 0.00028 31.7 8.2 73 164-239 13-101 (266)
429 4dkj_A Cytosine-specific methy 78.5 2 7E-05 39.0 4.6 44 165-208 10-59 (403)
430 1w6u_A 2,4-dienoyl-COA reducta 78.4 7.7 0.00026 32.6 8.1 74 164-240 25-114 (302)
431 1ja9_A 4HNR, 1,3,6,8-tetrahydr 77.9 8.8 0.0003 31.5 8.2 73 164-239 20-108 (274)
432 3ijr_A Oxidoreductase, short c 77.8 8.3 0.00028 32.6 8.1 74 164-239 46-134 (291)
433 2z1n_A Dehydrogenase; reductas 77.7 11 0.00038 31.0 8.7 73 164-239 6-94 (260)
434 1vj0_A Alcohol dehydrogenase, 77.7 3.1 0.00011 36.8 5.6 44 162-205 193-238 (380)
435 1e7w_A Pteridine reductase; di 77.6 9.1 0.00031 32.3 8.3 61 164-226 8-73 (291)
436 2eih_A Alcohol dehydrogenase; 77.5 3.9 0.00013 35.5 6.0 44 161-205 163-209 (343)
437 2d8a_A PH0655, probable L-thre 77.4 3.1 0.00011 36.2 5.4 43 164-206 167-211 (348)
438 4eso_A Putative oxidoreductase 77.3 11 0.00036 31.2 8.5 73 163-240 6-92 (255)
439 3ppi_A 3-hydroxyacyl-COA dehyd 77.2 8.5 0.00029 32.1 8.0 69 164-237 29-110 (281)
440 1mxh_A Pteridine reductase 2; 77.2 8.4 0.00029 32.0 7.9 74 164-240 10-104 (276)
441 3t4x_A Oxidoreductase, short c 77.1 8.2 0.00028 32.1 7.8 76 164-240 9-95 (267)
442 1gee_A Glucose 1-dehydrogenase 77.1 8.6 0.0003 31.4 7.9 73 164-239 6-94 (261)
443 1v3u_A Leukotriene B4 12- hydr 77.1 3.1 0.00011 35.9 5.3 44 161-205 142-188 (333)
444 3nzo_A UDP-N-acetylglucosamine 77.0 8.5 0.00029 34.2 8.3 78 164-242 34-124 (399)
445 1piw_A Hypothetical zinc-type 77.0 2.2 7.6E-05 37.4 4.3 45 161-206 176-222 (360)
446 3gvc_A Oxidoreductase, probabl 77.0 9.1 0.00031 32.2 8.1 73 163-240 27-113 (277)
447 3pvc_A TRNA 5-methylaminomethy 76.9 1.8 6.2E-05 41.7 4.0 75 164-238 58-179 (689)
448 2c07_A 3-oxoacyl-(acyl-carrier 76.7 9.7 0.00033 31.9 8.2 74 164-240 43-131 (285)
449 3ruf_A WBGU; rossmann fold, UD 76.5 4.5 0.00015 34.7 6.1 74 164-239 24-109 (351)
450 3a28_C L-2.3-butanediol dehydr 76.3 8.2 0.00028 31.8 7.5 74 165-240 2-91 (258)
451 3k31_A Enoyl-(acyl-carrier-pro 76.2 8.6 0.00029 32.6 7.8 75 163-240 28-118 (296)
452 3jyo_A Quinate/shikimate dehyd 76.2 4.9 0.00017 34.5 6.2 75 163-239 125-203 (283)
453 2c0c_A Zinc binding alcohol de 76.1 4.8 0.00016 35.4 6.3 44 161-205 160-206 (362)
454 1rjw_A ADH-HT, alcohol dehydro 75.9 4.8 0.00016 34.9 6.2 44 161-205 161-206 (339)
455 1jw9_B Molybdopterin biosynthe 75.9 2.1 7.2E-05 35.9 3.7 73 164-236 30-127 (249)
456 2pd6_A Estradiol 17-beta-dehyd 75.9 8 0.00027 31.7 7.3 74 164-239 6-101 (264)
457 2vz8_A Fatty acid synthase; tr 75.9 0.51 1.8E-05 52.4 -0.2 76 164-242 1240-1323(2512)
458 3gms_A Putative NADPH:quinone 75.8 2.3 7.7E-05 37.0 4.0 45 161-206 141-188 (340)
459 3l6e_A Oxidoreductase, short-c 75.5 12 0.0004 30.5 8.2 71 165-240 3-87 (235)
460 4e6p_A Probable sorbitol dehyd 75.4 13 0.00046 30.5 8.6 72 164-240 7-92 (259)
461 4a2c_A Galactitol-1-phosphate 75.3 5.2 0.00018 34.6 6.3 45 162-206 158-204 (346)
462 2pnf_A 3-oxoacyl-[acyl-carrier 75.1 11 0.00039 30.3 8.0 73 164-239 6-94 (248)
463 2hcy_A Alcohol dehydrogenase 1 74.9 2.9 9.9E-05 36.4 4.5 43 162-205 167-212 (347)
464 3is3_A 17BETA-hydroxysteroid d 74.9 13 0.00043 30.9 8.4 76 163-240 16-106 (270)
465 4eez_A Alcohol dehydrogenase 1 74.9 5.1 0.00017 34.7 6.1 45 162-206 161-207 (348)
466 3uf0_A Short-chain dehydrogena 74.9 9 0.00031 32.1 7.5 75 163-240 29-116 (273)
467 2qhx_A Pteridine reductase 1; 74.8 11 0.00039 32.4 8.3 60 164-226 45-110 (328)
468 2cfc_A 2-(R)-hydroxypropyl-COM 74.7 11 0.00037 30.5 7.8 71 166-239 3-89 (250)
469 3jyn_A Quinone oxidoreductase; 74.7 4.1 0.00014 35.1 5.4 45 161-206 137-184 (325)
470 3o8q_A Shikimate 5-dehydrogena 74.6 21 0.00073 30.4 9.9 70 163-238 124-195 (281)
471 1zk4_A R-specific alcohol dehy 74.6 9.2 0.00032 31.0 7.3 73 164-240 5-92 (251)
472 3afn_B Carbonyl reductase; alp 74.4 6.3 0.00021 32.1 6.3 73 164-239 6-94 (258)
473 3sc4_A Short chain dehydrogena 74.4 6 0.00021 33.4 6.3 75 164-240 8-103 (285)
474 4dcm_A Ribosomal RNA large sub 74.3 9.8 0.00033 33.8 7.9 67 164-236 38-106 (375)
475 3f9i_A 3-oxoacyl-[acyl-carrier 74.2 10 0.00034 30.9 7.5 73 163-240 12-94 (249)
476 2bgk_A Rhizome secoisolaricire 74.0 12 0.00043 30.7 8.1 72 164-239 15-101 (278)
477 2g1u_A Hypothetical protein TM 73.9 1.7 5.9E-05 33.2 2.4 68 163-237 17-91 (155)
478 4b7c_A Probable oxidoreductase 73.7 3.8 0.00013 35.4 4.9 42 161-203 146-190 (336)
479 3qlj_A Short chain dehydrogena 73.5 6.2 0.00021 33.9 6.2 76 163-240 25-124 (322)
480 3n74_A 3-ketoacyl-(acyl-carrie 73.4 16 0.00054 29.9 8.6 72 164-240 8-93 (261)
481 3osu_A 3-oxoacyl-[acyl-carrier 73.1 15 0.0005 30.0 8.2 74 165-240 4-92 (246)
482 3rwb_A TPLDH, pyridoxal 4-dehy 73.1 10 0.00035 31.1 7.3 72 164-240 5-90 (247)
483 2nwq_A Probable short-chain de 73.0 12 0.00042 31.2 7.9 72 166-240 22-107 (272)
484 3r3s_A Oxidoreductase; structu 72.9 9.8 0.00033 32.2 7.3 75 164-240 48-138 (294)
485 2hq1_A Glucose/ribitol dehydro 72.6 9.5 0.00032 30.8 6.9 74 164-240 4-93 (247)
486 3ged_A Short-chain dehydrogena 72.5 8.9 0.0003 32.1 6.8 68 166-239 3-84 (247)
487 3op4_A 3-oxoacyl-[acyl-carrier 72.4 14 0.00047 30.3 7.9 72 164-240 8-93 (248)
488 2bd0_A Sepiapterin reductase; 72.4 13 0.00044 30.0 7.7 72 166-239 3-95 (244)
489 2j3h_A NADP-dependent oxidored 72.4 3.7 0.00013 35.5 4.6 44 161-205 152-198 (345)
490 1spx_A Short-chain reductase f 72.4 9.3 0.00032 31.7 6.9 75 164-240 5-96 (278)
491 3abi_A Putative uncharacterize 72.2 5.3 0.00018 35.2 5.5 65 164-237 15-84 (365)
492 3qwb_A Probable quinone oxidor 71.9 4.7 0.00016 34.8 5.1 44 161-205 145-191 (334)
493 3gk3_A Acetoacetyl-COA reducta 71.8 13 0.00044 30.8 7.7 75 164-240 24-113 (269)
494 1id1_A Putative potassium chan 71.8 15 0.00052 27.6 7.5 66 165-237 3-78 (153)
495 1oaa_A Sepiapterin reductase; 71.8 10 0.00034 31.2 6.9 61 164-225 5-72 (259)
496 3ctm_A Carbonyl reductase; alc 71.6 7.3 0.00025 32.4 6.1 74 164-239 33-120 (279)
497 2gdz_A NAD+-dependent 15-hydro 71.4 16 0.00054 30.1 8.1 75 164-239 6-95 (267)
498 1x1t_A D(-)-3-hydroxybutyrate 71.3 9.2 0.00031 31.5 6.6 74 164-240 3-93 (260)
499 4gkb_A 3-oxoacyl-[acyl-carrier 71.2 9.1 0.00031 32.2 6.6 75 163-240 5-93 (258)
500 2x9g_A PTR1, pteridine reducta 71.1 11 0.00039 31.5 7.2 75 164-240 22-116 (288)
No 1
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.67 E-value=2.2e-16 Score=136.96 Aligned_cols=80 Identities=23% Similarity=0.267 Sum_probs=70.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHh-----------------cCCCceEEEEeccCCC
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANR-----------------DGFSCIKFLVDDVLDT 225 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~-----------------~g~~~i~~~~~D~~~~ 225 (253)
.++.+|||+|||+|..+..|+++|+ +|+|||+|+.||+.|+++... ....+++++++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 3678999999999999999999988 999999999999999887531 0124799999999999
Q ss_pred cCC--CCccEEEEcccccee
Q 025428 226 KLE--RQFQLVMDKGTLDAI 243 (253)
Q Consensus 226 ~~~--~~fD~Vi~~~~l~~i 243 (253)
++. ++||+|++.++|+++
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l 165 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAI 165 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTS
T ss_pred CcccCCCEEEEEEhhhhhhC
Confidence 864 899999999999998
No 2
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.61 E-value=7.9e-16 Score=128.67 Aligned_cols=81 Identities=19% Similarity=0.200 Sum_probs=70.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc------------CCCceEEEEeccCCCcCC--
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRD------------GFSCIKFLVDDVLDTKLE-- 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~------------g~~~i~~~~~D~~~~~~~-- 228 (253)
.++.+|||+|||+|..+..|+++|+ +|+|+|+|+.||+.|+++.... ...+++++++|+.++++.
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 4678999999999999999999987 9999999999999999986431 124799999999999864
Q ss_pred CCccEEEEccccceec
Q 025428 229 RQFQLVMDKGTLDAIG 244 (253)
Q Consensus 229 ~~fD~Vi~~~~l~~i~ 244 (253)
++||+|++..++|++.
T Consensus 100 ~~fD~v~~~~~l~~l~ 115 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALP 115 (203)
T ss_dssp HSEEEEEEESCGGGSC
T ss_pred CCEEEEEECcchhhCC
Confidence 7999999999999873
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.58 E-value=7.4e-15 Score=127.95 Aligned_cols=80 Identities=15% Similarity=0.157 Sum_probs=71.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC---CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEcc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG---FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKG 238 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g---~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~ 238 (253)
.++.+|||||||||.++..++++. ..+|+|+|+|+.||+.|+++++..+.. +++++++|+.++++ +.||+|+++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~-~~~d~v~~~~ 147 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI-ENASMVVLNF 147 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-CSEEEEEEES
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-cccccceeee
Confidence 578899999999999999999861 228999999999999999999887765 69999999999876 4699999999
Q ss_pred cccee
Q 025428 239 TLDAI 243 (253)
Q Consensus 239 ~l~~i 243 (253)
+||++
T Consensus 148 ~l~~~ 152 (261)
T 4gek_A 148 TLQFL 152 (261)
T ss_dssp CGGGS
T ss_pred eeeec
Confidence 99997
No 4
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.54 E-value=2.9e-14 Score=122.00 Aligned_cols=89 Identities=19% Similarity=0.245 Sum_probs=78.0
Q ss_pred HHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcCC-CCcc
Q 025428 155 PVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKLE-RQFQ 232 (253)
Q Consensus 155 l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~-~~fD 232 (253)
++..+....++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.+++++...++.+ ++++++|+.+++++ ++||
T Consensus 37 ~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 116 (257)
T 3f4k_A 37 AVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELD 116 (257)
T ss_dssp HHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEE
T ss_pred HHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEE
Confidence 334444445678999999999999999999954599999999999999999999988875 99999999998875 8999
Q ss_pred EEEEcccccee
Q 025428 233 LVMDKGTLDAI 243 (253)
Q Consensus 233 ~Vi~~~~l~~i 243 (253)
+|++..++||+
T Consensus 117 ~v~~~~~l~~~ 127 (257)
T 3f4k_A 117 LIWSEGAIYNI 127 (257)
T ss_dssp EEEEESCSCCC
T ss_pred EEEecChHhhc
Confidence 99999999997
No 5
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.54 E-value=4.4e-14 Score=121.46 Aligned_cols=80 Identities=18% Similarity=0.328 Sum_probs=73.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++...++.++.++++|+.+++++ ++||+|+++.++|
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhH
Confidence 4678999999999999999999965 9999999999999999999888888899999999998876 8999999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 115 ~~ 116 (260)
T 1vl5_A 115 HF 116 (260)
T ss_dssp GC
T ss_pred hc
Confidence 97
No 6
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.53 E-value=1.8e-14 Score=118.36 Aligned_cols=94 Identities=16% Similarity=0.132 Sum_probs=78.5
Q ss_pred cccchHHHHhccC--CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc-
Q 025428 150 DLKSEPVEENDKY--LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK- 226 (253)
Q Consensus 150 ~~~~~l~~~l~~~--~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~- 226 (253)
.+...+...+... .++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|+++++.+++.+++++++|+.++.
T Consensus 28 ~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 107 (189)
T 3p9n_A 28 RVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVA 107 (189)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHh
Confidence 3344455555442 4778999999999999998888877789999999999999999999998878999999998864
Q ss_pred -C-CCCccEEEEcccccee
Q 025428 227 -L-ERQFQLVMDKGTLDAI 243 (253)
Q Consensus 227 -~-~~~fD~Vi~~~~l~~i 243 (253)
+ .++||+|+++..+++.
T Consensus 108 ~~~~~~fD~i~~~~p~~~~ 126 (189)
T 3p9n_A 108 AGTTSPVDLVLADPPYNVD 126 (189)
T ss_dssp HCCSSCCSEEEECCCTTSC
T ss_pred hccCCCccEEEECCCCCcc
Confidence 2 4899999999887763
No 7
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.53 E-value=4.2e-14 Score=122.20 Aligned_cols=88 Identities=20% Similarity=0.308 Sum_probs=77.3
Q ss_pred HHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCC-CCccE
Q 025428 156 VEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLE-RQFQL 233 (253)
Q Consensus 156 ~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~-~~fD~ 233 (253)
+..+....++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.|+++++..++. +++++++|+.+++++ ++||+
T Consensus 38 l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 117 (267)
T 3kkz_A 38 LSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDL 117 (267)
T ss_dssp HTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEE
T ss_pred HHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEE
Confidence 3333334577899999999999999999996669999999999999999999998886 599999999998865 89999
Q ss_pred EEEcccccee
Q 025428 234 VMDKGTLDAI 243 (253)
Q Consensus 234 Vi~~~~l~~i 243 (253)
|++..+++++
T Consensus 118 i~~~~~~~~~ 127 (267)
T 3kkz_A 118 IWSEGAIYNI 127 (267)
T ss_dssp EEESSCGGGT
T ss_pred EEEcCCceec
Confidence 9999999987
No 8
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.53 E-value=4.2e-14 Score=117.21 Aligned_cols=81 Identities=31% Similarity=0.423 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
.++.+|||+|||+|.++..+++.|..+++|+|+|+.+++.++++... ..+++++++|+.+++++ ++||+|+++++++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 46679999999999999999999766999999999999999998764 34799999999998765 7899999999999
Q ss_pred eecc
Q 025428 242 AIGL 245 (253)
Q Consensus 242 ~i~~ 245 (253)
++.+
T Consensus 119 ~~~~ 122 (215)
T 2pxx_A 119 ALLA 122 (215)
T ss_dssp HHTT
T ss_pred hhcc
Confidence 8753
No 9
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.52 E-value=6.8e-14 Score=114.72 Aligned_cols=80 Identities=20% Similarity=0.336 Sum_probs=73.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccce
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLDA 242 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~~ 242 (253)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++...++.+++++++|+.+++++++||+|++..++||
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVLMF 109 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEEEESCGGG
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEEEcchhhh
Confidence 3567999999999999999999966 999999999999999999988888789999999998877789999999999998
Q ss_pred e
Q 025428 243 I 243 (253)
Q Consensus 243 i 243 (253)
+
T Consensus 110 ~ 110 (199)
T 2xvm_A 110 L 110 (199)
T ss_dssp S
T ss_pred C
Confidence 7
No 10
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.51 E-value=3e-14 Score=120.77 Aligned_cols=79 Identities=23% Similarity=0.239 Sum_probs=70.5
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEeccCCCcCCCCccEEEEccccce
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVDDVLDTKLERQFQLVMDKGTLDA 242 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~~ 242 (253)
+..+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|++++...+. .+++++++|+.+++..++||+|++..++++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 446999999999999999998765 899999999999999999876443 369999999999877789999999999999
Q ss_pred e
Q 025428 243 I 243 (253)
Q Consensus 243 i 243 (253)
+
T Consensus 145 ~ 145 (235)
T 3lcc_A 145 I 145 (235)
T ss_dssp S
T ss_pred C
Confidence 8
No 11
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.50 E-value=9.8e-14 Score=121.03 Aligned_cols=88 Identities=20% Similarity=0.365 Sum_probs=78.6
Q ss_pred chHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCcc
Q 025428 153 SEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQ 232 (253)
Q Consensus 153 ~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD 232 (253)
..+++.+.. .++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.+++++..+++ +++++++|+.+.+++++||
T Consensus 110 ~~~~~~~~~-~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~fD 186 (286)
T 3m70_A 110 GDVVDAAKI-ISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANIQENYD 186 (286)
T ss_dssp HHHHHHHHH-SCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCCCSCEE
T ss_pred HHHHHHhhc-cCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccccCCcc
Confidence 344555544 3778999999999999999999977 999999999999999999999888 9999999999987788999
Q ss_pred EEEEcccccee
Q 025428 233 LVMDKGTLDAI 243 (253)
Q Consensus 233 ~Vi~~~~l~~i 243 (253)
+|+++.++||+
T Consensus 187 ~i~~~~~~~~~ 197 (286)
T 3m70_A 187 FIVSTVVFMFL 197 (286)
T ss_dssp EEEECSSGGGS
T ss_pred EEEEccchhhC
Confidence 99999999987
No 12
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.50 E-value=1.6e-14 Score=125.59 Aligned_cols=74 Identities=20% Similarity=0.187 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
....+|||||||||.++..|++++. +|+|+|+|+.|++.|+++ .+++++++|+.+++++ ++||+|++..++|
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~------~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h 110 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRH------PRVTYAVAPAEDTGLPPASVDVAIAAQAMH 110 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCC------TTEEEEECCTTCCCCCSSCEEEEEECSCCT
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhc------CCceeehhhhhhhcccCCcccEEEEeeehh
Confidence 3457999999999999999999965 999999999999887642 4899999999999886 8999999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
++
T Consensus 111 ~~ 112 (257)
T 4hg2_A 111 WF 112 (257)
T ss_dssp TC
T ss_pred Hh
Confidence 87
No 13
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.50 E-value=5.2e-14 Score=117.48 Aligned_cols=79 Identities=23% Similarity=0.232 Sum_probs=71.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccce
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLDA 242 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~~ 242 (253)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|++++...+ +++++++|+.+++.+++||+|++..++||
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFSTAELFDLIVVAEVLYY 126 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCCCSCCEEEEEEESCGGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCCCCCCccEEEEccHHHh
Confidence 4667999999999999999999965 99999999999999999986643 89999999999886689999999999999
Q ss_pred ec
Q 025428 243 IG 244 (253)
Q Consensus 243 i~ 244 (253)
+.
T Consensus 127 ~~ 128 (216)
T 3ofk_A 127 LE 128 (216)
T ss_dssp SS
T ss_pred CC
Confidence 73
No 14
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.50 E-value=1.5e-13 Score=117.51 Aligned_cols=81 Identities=21% Similarity=0.222 Sum_probs=73.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
.++.+|||||||+|.++..+++....+|+|+|+|+.|++.|+++++..++. +++++++|+.+++++++||+|++..++|
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~V~~~~~~~ 114 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGATW 114 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSCEEEEEEESCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCCCCEEEECCChH
Confidence 577899999999999999999873338999999999999999999988885 7999999999987778999999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 115 ~~ 116 (256)
T 1nkv_A 115 IA 116 (256)
T ss_dssp GT
T ss_pred hc
Confidence 87
No 15
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.49 E-value=6.4e-14 Score=118.41 Aligned_cols=84 Identities=24% Similarity=0.326 Sum_probs=72.1
Q ss_pred HHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEE
Q 025428 155 PVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLV 234 (253)
Q Consensus 155 l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~V 234 (253)
+.+.+....++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++... +++++++|+.++..+++||+|
T Consensus 33 ~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~~~~~fD~v 107 (250)
T 2p7i_A 33 MVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQLPRRYDNI 107 (250)
T ss_dssp HHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCCCSSCEEEE
T ss_pred HHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcCcCCcccEE
Confidence 344444445677999999999999999999866 899999999999999998643 789999999988556899999
Q ss_pred EEcccccee
Q 025428 235 MDKGTLDAI 243 (253)
Q Consensus 235 i~~~~l~~i 243 (253)
++..+|||+
T Consensus 108 ~~~~~l~~~ 116 (250)
T 2p7i_A 108 VLTHVLEHI 116 (250)
T ss_dssp EEESCGGGC
T ss_pred EEhhHHHhh
Confidence 999999998
No 16
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.49 E-value=1.4e-13 Score=117.25 Aligned_cols=80 Identities=21% Similarity=0.333 Sum_probs=74.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++++...++.+++++++|+.+++++ ++||+|++..++|
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 98 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAH 98 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchh
Confidence 5788999999999999999999965 9999999999999999999888888899999999998876 8999999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 99 ~~ 100 (239)
T 1xxl_A 99 HF 100 (239)
T ss_dssp GC
T ss_pred hc
Confidence 87
No 17
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.49 E-value=3.7e-14 Score=120.61 Aligned_cols=89 Identities=18% Similarity=0.115 Sum_probs=77.4
Q ss_pred HHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEeccCCCcCCCCccE
Q 025428 155 PVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVDDVLDTKLERQFQL 233 (253)
Q Consensus 155 l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~D~~~~~~~~~fD~ 233 (253)
+...+....++.+|||+|||+|.++..+++.| .+|+|+|+|+.|++.|+++++..++ .+++++++|+.+++.+++||+
T Consensus 69 l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~ 147 (241)
T 3gdh_A 69 IAGRVSQSFKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADV 147 (241)
T ss_dssp HHHHHHHHSCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSE
T ss_pred HHHHhhhccCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCE
Confidence 33444333477899999999999999999997 5999999999999999999999998 489999999998876689999
Q ss_pred EEEccccceec
Q 025428 234 VMDKGTLDAIG 244 (253)
Q Consensus 234 Vi~~~~l~~i~ 244 (253)
|+++.+++++.
T Consensus 148 v~~~~~~~~~~ 158 (241)
T 3gdh_A 148 VFLSPPWGGPD 158 (241)
T ss_dssp EEECCCCSSGG
T ss_pred EEECCCcCCcc
Confidence 99999998864
No 18
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.49 E-value=1.2e-13 Score=122.34 Aligned_cols=81 Identities=16% Similarity=0.195 Sum_probs=74.6
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCC-CCccEEEEcc
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLE-RQFQLVMDKG 238 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~-~~fD~Vi~~~ 238 (253)
..++.+|||+|||+|.++..+++. +. +|+|+|+|+.|++.|++++...++. +++++++|+.+++++ ++||+|++..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 456789999999999999999998 65 8999999999999999999999886 699999999998875 8999999999
Q ss_pred cccee
Q 025428 239 TLDAI 243 (253)
Q Consensus 239 ~l~~i 243 (253)
+++|+
T Consensus 194 ~l~~~ 198 (312)
T 3vc1_A 194 STMYV 198 (312)
T ss_dssp CGGGS
T ss_pred chhhC
Confidence 99987
No 19
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.48 E-value=1.7e-13 Score=114.73 Aligned_cols=81 Identities=22% Similarity=0.369 Sum_probs=72.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCC-CcEEEEeCCHHHHHHHHHHHHhcCCC-----ceEEEEeccCCCcCC-CCccEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGF-SDLTGVDYSEDAINLAQSLANRDGFS-----CIKFLVDDVLDTKLE-RQFQLVM 235 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~-~~v~gvD~s~~~l~~ar~~~~~~g~~-----~i~~~~~D~~~~~~~-~~fD~Vi 235 (253)
.++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|++++...++. +++++++|+...+.. ++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 4678999999999999999999843 59999999999999999999877765 799999999776654 7999999
Q ss_pred Ecccccee
Q 025428 236 DKGTLDAI 243 (253)
Q Consensus 236 ~~~~l~~i 243 (253)
+..+++|+
T Consensus 108 ~~~~l~~~ 115 (217)
T 3jwh_A 108 VIEVIEHL 115 (217)
T ss_dssp EESCGGGC
T ss_pred eHHHHHcC
Confidence 99999998
No 20
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.48 E-value=1.4e-13 Score=114.40 Aligned_cols=85 Identities=24% Similarity=0.274 Sum_probs=73.4
Q ss_pred hHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccE
Q 025428 154 EPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQL 233 (253)
Q Consensus 154 ~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~ 233 (253)
.+.+.+....++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++ .+..+++++++|+.++..+++||+
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~~~~~~D~ 110 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWTPDRQWDA 110 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCCCSSCEEE
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCCCCCceeE
Confidence 4455555556778999999999999999999966 99999999999999998 455689999999999844589999
Q ss_pred EEEcccccee
Q 025428 234 VMDKGTLDAI 243 (253)
Q Consensus 234 Vi~~~~l~~i 243 (253)
|++..++||+
T Consensus 111 v~~~~~l~~~ 120 (218)
T 3ou2_A 111 VFFAHWLAHV 120 (218)
T ss_dssp EEEESCGGGS
T ss_pred EEEechhhcC
Confidence 9999999997
No 21
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.48 E-value=1.7e-13 Score=114.66 Aligned_cols=81 Identities=21% Similarity=0.312 Sum_probs=72.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCC-CcEEEEeCCHHHHHHHHHHHHhcCCC-----ceEEEEeccCCCcCC-CCccEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGF-SDLTGVDYSEDAINLAQSLANRDGFS-----CIKFLVDDVLDTKLE-RQFQLVM 235 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~-~~v~gvD~s~~~l~~ar~~~~~~g~~-----~i~~~~~D~~~~~~~-~~fD~Vi 235 (253)
.++.+|||||||+|.++..+++.+. .+++|+|+|+.|++.|++++...++. +++++++|+...+.. ++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 4678999999999999999999853 59999999999999999998877664 799999999877654 8999999
Q ss_pred Ecccccee
Q 025428 236 DKGTLDAI 243 (253)
Q Consensus 236 ~~~~l~~i 243 (253)
+..+++|+
T Consensus 108 ~~~~l~~~ 115 (219)
T 3jwg_A 108 VIEVIEHL 115 (219)
T ss_dssp EESCGGGC
T ss_pred EHHHHHhC
Confidence 99999998
No 22
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.48 E-value=1.4e-13 Score=116.24 Aligned_cols=85 Identities=21% Similarity=0.297 Sum_probs=73.8
Q ss_pred HHhccCCCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEE
Q 025428 157 EENDKYLSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVM 235 (253)
Q Consensus 157 ~~l~~~~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi 235 (253)
..+....++.+|||+|||+|.++..+++.. ..+++|+|+|+.|++.|++++...+ +++++++|+.+++++++||+|+
T Consensus 37 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~~~fD~v~ 114 (234)
T 3dtn_A 37 SIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFEEKYDMVV 114 (234)
T ss_dssp HTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCCSCEEEEE
T ss_pred HHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCCCCceEEE
Confidence 333333567899999999999999999983 3499999999999999999986654 8999999999988779999999
Q ss_pred Ecccccee
Q 025428 236 DKGTLDAI 243 (253)
Q Consensus 236 ~~~~l~~i 243 (253)
+..++||+
T Consensus 115 ~~~~l~~~ 122 (234)
T 3dtn_A 115 SALSIHHL 122 (234)
T ss_dssp EESCGGGS
T ss_pred EeCccccC
Confidence 99999998
No 23
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.47 E-value=4.4e-14 Score=135.61 Aligned_cols=81 Identities=25% Similarity=0.453 Sum_probs=73.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc--C-CCCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK--L-ERQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~--~-~~~fD~Vi~~~~ 239 (253)
.++.+|||||||+|.++..||++|+ +|+|||+|+.+|+.|+..+...|..+++|++++++++. . +++||+|+|..+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 3567999999999999999999988 89999999999999999998887558999999998873 3 478999999999
Q ss_pred cceec
Q 025428 240 LDAIG 244 (253)
Q Consensus 240 l~~i~ 244 (253)
|||+.
T Consensus 144 ~ehv~ 148 (569)
T 4azs_A 144 FHHIV 148 (569)
T ss_dssp HHHHH
T ss_pred hhcCC
Confidence 99984
No 24
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.47 E-value=2.1e-13 Score=111.24 Aligned_cols=74 Identities=15% Similarity=0.126 Sum_probs=66.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc--CCCCccEEEEc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK--LERQFQLVMDK 237 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~--~~~~fD~Vi~~ 237 (253)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|+++++.+++.+++++++++..+. .+++||+|+++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 46789999999999999999999 4499999999999999999999988888999998887753 35789999986
No 25
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.46 E-value=3.7e-13 Score=111.67 Aligned_cols=91 Identities=20% Similarity=0.341 Sum_probs=77.0
Q ss_pred cchHHHHhcc-CCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCC
Q 025428 152 KSEPVEENDK-YLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQ 230 (253)
Q Consensus 152 ~~~l~~~l~~-~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~ 230 (253)
...+.+.+.. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+.|++.|++++..+++.+++++++|+.+. .+++
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~ 125 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD-VDGK 125 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT-CCSC
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc-CCCC
Confidence 3444555543 2567899999999999999999987779999999999999999999998887799999999875 3589
Q ss_pred ccEEEEcccccee
Q 025428 231 FQLVMDKGTLDAI 243 (253)
Q Consensus 231 fD~Vi~~~~l~~i 243 (253)
||+|+++.+++++
T Consensus 126 fD~i~~~~~~~~~ 138 (205)
T 3grz_A 126 FDLIVANILAEIL 138 (205)
T ss_dssp EEEEEEESCHHHH
T ss_pred ceEEEECCcHHHH
Confidence 9999999888764
No 26
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.46 E-value=2.4e-13 Score=118.53 Aligned_cols=79 Identities=23% Similarity=0.360 Sum_probs=71.8
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEeccCCCc-C-CCCccEEEEcccc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVDDVLDTK-L-ERQFQLVMDKGTL 240 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~D~~~~~-~-~~~fD~Vi~~~~l 240 (253)
++.+|||||||+|.++..+++.|. +|+|+|+|+.|++.|++++...++ .+++++++|+.+++ + +++||+|++..++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 467999999999999999999966 999999999999999999998888 47999999999987 3 4899999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
+|+
T Consensus 147 ~~~ 149 (285)
T 4htf_A 147 EWV 149 (285)
T ss_dssp GGC
T ss_pred hcc
Confidence 997
No 27
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.45 E-value=4.2e-13 Score=111.58 Aligned_cols=81 Identities=16% Similarity=0.105 Sum_probs=73.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
.++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.|++++...++.+++++++|+.+.... ++||+|++..+++
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPP 154 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchh
Confidence 577899999999999999999995 49999999999999999999998888899999999886554 7999999999998
Q ss_pred eec
Q 025428 242 AIG 244 (253)
Q Consensus 242 ~i~ 244 (253)
++.
T Consensus 155 ~~~ 157 (210)
T 3lbf_A 155 EIP 157 (210)
T ss_dssp SCC
T ss_pred hhh
Confidence 863
No 28
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.45 E-value=2.4e-13 Score=113.49 Aligned_cols=81 Identities=25% Similarity=0.347 Sum_probs=74.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC--CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG--FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g--~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~ 239 (253)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.|++.+++++...++.+++++++|+.+++++ ++||+|++..+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFT 115 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESC
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehh
Confidence 567899999999999999999984 249999999999999999999988888899999999998765 78999999999
Q ss_pred ccee
Q 025428 240 LDAI 243 (253)
Q Consensus 240 l~~i 243 (253)
++++
T Consensus 116 l~~~ 119 (219)
T 3dh0_A 116 FHEL 119 (219)
T ss_dssp GGGC
T ss_pred hhhc
Confidence 9987
No 29
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.45 E-value=4.4e-13 Score=117.35 Aligned_cols=82 Identities=15% Similarity=0.226 Sum_probs=74.5
Q ss_pred cCCCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCC-CCccEEEEc
Q 025428 161 KYLSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLE-RQFQLVMDK 237 (253)
Q Consensus 161 ~~~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~-~~fD~Vi~~ 237 (253)
...++.+|||||||+|.++..+++. |. +|+|+|+|+.|++.|++++...++. +++++++|+.+++++ ++||+|++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 157 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQ 157 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEec
Confidence 4457789999999999999999987 66 9999999999999999999888875 699999999998875 899999999
Q ss_pred ccccee
Q 025428 238 GTLDAI 243 (253)
Q Consensus 238 ~~l~~i 243 (253)
.+++|+
T Consensus 158 ~~l~~~ 163 (297)
T 2o57_A 158 DAFLHS 163 (297)
T ss_dssp SCGGGC
T ss_pred chhhhc
Confidence 999997
No 30
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.45 E-value=1.3e-13 Score=117.31 Aligned_cols=80 Identities=19% Similarity=0.284 Sum_probs=71.7
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccce
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLDA 242 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~~ 242 (253)
++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.|++++...+..+++++++|+.+++++ ++||+|++..+++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 57899999999999999999886669999999999999999998776545799999999988765 68999999999998
Q ss_pred e
Q 025428 243 I 243 (253)
Q Consensus 243 i 243 (253)
+
T Consensus 159 ~ 159 (241)
T 2ex4_A 159 L 159 (241)
T ss_dssp S
T ss_pred C
Confidence 7
No 31
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.45 E-value=8.4e-14 Score=116.12 Aligned_cols=90 Identities=16% Similarity=0.076 Sum_probs=73.7
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC--CceEEEEeccCCCcC--
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF--SCIKFLVDDVLDTKL-- 227 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~--~~i~~~~~D~~~~~~-- 227 (253)
...+.+.+....++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|+++++.+++ .+++++++|+.++..
T Consensus 41 ~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 120 (201)
T 2ift_A 41 KETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP 120 (201)
T ss_dssp HHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC
T ss_pred HHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh
Confidence 3344444443236789999999999999998888777999999999999999999999998 689999999987532
Q ss_pred -CCC-ccEEEEccccc
Q 025428 228 -ERQ-FQLVMDKGTLD 241 (253)
Q Consensus 228 -~~~-fD~Vi~~~~l~ 241 (253)
+++ ||+|+++..++
T Consensus 121 ~~~~~fD~I~~~~~~~ 136 (201)
T 2ift_A 121 QNQPHFDVVFLDPPFH 136 (201)
T ss_dssp CSSCCEEEEEECCCSS
T ss_pred ccCCCCCEEEECCCCC
Confidence 368 99999987754
No 32
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.44 E-value=3.1e-13 Score=118.20 Aligned_cols=82 Identities=23% Similarity=0.270 Sum_probs=73.6
Q ss_pred cCCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEcc
Q 025428 161 KYLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKG 238 (253)
Q Consensus 161 ~~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~ 238 (253)
...++.+|||||||+|.++..+++. + ..+|+|+|+|+.+++.|++++...+. +++++++|+.+++++++||+|++..
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~v~~~~ 97 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIELNDKYDIAICHA 97 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCCSSCEEEEEEES
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCcCCCeeEEEECC
Confidence 3457789999999999999999987 2 24999999999999999999887765 8999999999988888999999999
Q ss_pred cccee
Q 025428 239 TLDAI 243 (253)
Q Consensus 239 ~l~~i 243 (253)
+++++
T Consensus 98 ~l~~~ 102 (284)
T 3gu3_A 98 FLLHM 102 (284)
T ss_dssp CGGGC
T ss_pred hhhcC
Confidence 99987
No 33
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.44 E-value=1e-13 Score=115.68 Aligned_cols=90 Identities=9% Similarity=-0.018 Sum_probs=73.7
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC-cC-CC
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT-KL-ER 229 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~-~~-~~ 229 (253)
...+++.+....++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|+++++.+++.+++++++|+.+. +. .+
T Consensus 42 ~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~ 121 (202)
T 2fpo_A 42 RETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGT 121 (202)
T ss_dssp HHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCC
T ss_pred HHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCC
Confidence 33444444332367899999999999999988887679999999999999999999999887899999999874 33 37
Q ss_pred CccEEEEccccc
Q 025428 230 QFQLVMDKGTLD 241 (253)
Q Consensus 230 ~fD~Vi~~~~l~ 241 (253)
+||+|+++..++
T Consensus 122 ~fD~V~~~~p~~ 133 (202)
T 2fpo_A 122 PHNIVFVDPPFR 133 (202)
T ss_dssp CEEEEEECCSSS
T ss_pred CCCEEEECCCCC
Confidence 899999987744
No 34
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.43 E-value=4.9e-13 Score=114.37 Aligned_cols=80 Identities=13% Similarity=0.134 Sum_probs=71.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++++ ..+..+++++++|+.+++++ ++||+|++..++|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 5678999999999999999999865 9999999999999999998 44445899999999998865 7899999999999
Q ss_pred eec
Q 025428 242 AIG 244 (253)
Q Consensus 242 ~i~ 244 (253)
|+.
T Consensus 116 ~~~ 118 (263)
T 2yqz_A 116 LVP 118 (263)
T ss_dssp GCT
T ss_pred hcC
Confidence 973
No 35
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.43 E-value=4.1e-13 Score=113.44 Aligned_cols=78 Identities=21% Similarity=0.266 Sum_probs=72.1
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEcc-ccce
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKG-TLDA 242 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~-~l~~ 242 (253)
++.+|||+|||+|.++..+++.+. +++|+|+|+.|++.++++....+. +++++++|+.+++++++||+|++.. +|||
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNINRKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCCSCCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCccCCceEEEEcCccccc
Confidence 668999999999999999999965 899999999999999999988776 8999999999987778999999998 9999
Q ss_pred e
Q 025428 243 I 243 (253)
Q Consensus 243 i 243 (253)
+
T Consensus 115 ~ 115 (246)
T 1y8c_A 115 I 115 (246)
T ss_dssp C
T ss_pred c
Confidence 7
No 36
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.43 E-value=3.9e-13 Score=111.47 Aligned_cols=78 Identities=23% Similarity=0.342 Sum_probs=71.2
Q ss_pred CEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCC-CCccEEEEcccccee
Q 025428 166 WSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLE-RQFQLVMDKGTLDAI 243 (253)
Q Consensus 166 ~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~~i 243 (253)
.+|||+|||+|.++..+++....+++|+|+|+.+++.|++++...++. +++++++|+.+++++ ++||+|++..++||+
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 124 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFW 124 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGC
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhc
Confidence 399999999999999999983349999999999999999999988875 799999999998876 899999999999997
No 37
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.43 E-value=2.2e-13 Score=110.73 Aligned_cols=91 Identities=16% Similarity=0.124 Sum_probs=75.1
Q ss_pred ccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcC--
Q 025428 151 LKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKL-- 227 (253)
Q Consensus 151 ~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~-- 227 (253)
+...+...+....++.+|||+|||+|.++..+++.+..+|+|+|+|+.|++.|++++..+++. +++++++|+.+...
T Consensus 31 ~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 110 (187)
T 2fhp_A 31 VKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQF 110 (187)
T ss_dssp HHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHH
Confidence 344445555444577899999999999999999887679999999999999999999988874 79999999987432
Q ss_pred ---CCCccEEEEccccc
Q 025428 228 ---ERQFQLVMDKGTLD 241 (253)
Q Consensus 228 ---~~~fD~Vi~~~~l~ 241 (253)
.++||+|+++.+++
T Consensus 111 ~~~~~~fD~i~~~~~~~ 127 (187)
T 2fhp_A 111 YEEKLQFDLVLLDPPYA 127 (187)
T ss_dssp HHTTCCEEEEEECCCGG
T ss_pred HhcCCCCCEEEECCCCC
Confidence 57899999987755
No 38
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.43 E-value=2.9e-13 Score=109.58 Aligned_cols=92 Identities=20% Similarity=0.185 Sum_probs=75.9
Q ss_pred cccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCC-c-
Q 025428 150 DLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDT-K- 226 (253)
Q Consensus 150 ~~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~-~- 226 (253)
.+...+.+.+....++.+|||+|||+|.++..+++.+..+|+|+|+|+.|++.|+++++..++. +++++++|+.+. +
T Consensus 17 ~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (177)
T 2esr_A 17 KVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC 96 (177)
T ss_dssp -CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHh
Confidence 3444555555544577899999999999999999987679999999999999999999988885 699999999874 2
Q ss_pred CCCCccEEEEccccc
Q 025428 227 LERQFQLVMDKGTLD 241 (253)
Q Consensus 227 ~~~~fD~Vi~~~~l~ 241 (253)
.+++||+|+++..++
T Consensus 97 ~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 97 LTGRFDLVFLDPPYA 111 (177)
T ss_dssp BCSCEEEEEECCSSH
T ss_pred hcCCCCEEEECCCCC
Confidence 347799999987654
No 39
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.43 E-value=7.2e-13 Score=114.39 Aligned_cols=81 Identities=27% Similarity=0.356 Sum_probs=73.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCC-CCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLE-RQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~-~~fD~Vi~~~~l 240 (253)
.++.+|||||||+|.++..+++....+|+|+|+|+.+++.+++++...++. +++++++|+.+++++ ++||+|++..++
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 139 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESL 139 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechh
Confidence 467899999999999999999863349999999999999999999888876 699999999998876 799999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
+|+
T Consensus 140 ~~~ 142 (273)
T 3bus_A 140 HHM 142 (273)
T ss_dssp TTS
T ss_pred hhC
Confidence 997
No 40
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.43 E-value=5.2e-13 Score=115.57 Aligned_cols=81 Identities=22% Similarity=0.372 Sum_probs=74.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l 240 (253)
.++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.+++++...++.+++++++|+.+++++ ++||+|++..++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 467899999999999999999983 349999999999999999999998888999999999998865 899999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
+|+
T Consensus 116 ~~~ 118 (276)
T 3mgg_A 116 EHL 118 (276)
T ss_dssp GGC
T ss_pred hhc
Confidence 987
No 41
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.43 E-value=3.8e-13 Score=111.96 Aligned_cols=83 Identities=14% Similarity=0.111 Sum_probs=71.6
Q ss_pred HHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEE
Q 025428 155 PVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLV 234 (253)
Q Consensus 155 l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~V 234 (253)
+..++....++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++++ ++.++++|+.+++..++||+|
T Consensus 34 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~~~fD~v 106 (211)
T 3e23_A 34 LTKFLGELPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL------GRPVRTMLFHQLDAIDAYDAV 106 (211)
T ss_dssp HHHHHTTSCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH------TSCCEECCGGGCCCCSCEEEE
T ss_pred HHHHHHhcCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc------CCceEEeeeccCCCCCcEEEE
Confidence 334444445678999999999999999999966 9999999999999999986 567889999998866999999
Q ss_pred EEccccceec
Q 025428 235 MDKGTLDAIG 244 (253)
Q Consensus 235 i~~~~l~~i~ 244 (253)
++..+++|+.
T Consensus 107 ~~~~~l~~~~ 116 (211)
T 3e23_A 107 WAHACLLHVP 116 (211)
T ss_dssp EECSCGGGSC
T ss_pred EecCchhhcC
Confidence 9999999973
No 42
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.43 E-value=4.6e-13 Score=116.63 Aligned_cols=82 Identities=24% Similarity=0.290 Sum_probs=73.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcC--CCCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKL--ERQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~--~~~fD~Vi~~~~ 239 (253)
.++.+|||+|||+|.++..+++.+..+++|+|+|+.|++.|++++...++. +++++++|+.+.++ +++||+|++..+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 467899999999999999999887669999999999999999999887763 69999999998876 478999999999
Q ss_pred cceec
Q 025428 240 LDAIG 244 (253)
Q Consensus 240 l~~i~ 244 (253)
+|++.
T Consensus 143 l~~~~ 147 (298)
T 1ri5_A 143 FHYAF 147 (298)
T ss_dssp GGGGG
T ss_pred hhhhc
Confidence 98853
No 43
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.43 E-value=5.1e-13 Score=110.58 Aligned_cols=83 Identities=19% Similarity=0.349 Sum_probs=70.2
Q ss_pred hccCCCCCEEEEEcCCCcHH-HHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEE
Q 025428 159 NDKYLSSWSVLDIGTGNGLL-LQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMD 236 (253)
Q Consensus 159 l~~~~~~~~VLDiGcGtG~~-~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~ 236 (253)
+....++.+|||+|||+|.+ ...++..+. +|+|+|+|+.|++.+++++...+. +++++++|+.+++++ ++||+|++
T Consensus 18 ~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 18 CNESNLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNF-KLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp HHHSSSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTC-CCCEEECCTTSCCSCTTCEEEEEE
T ss_pred HhccCCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCC-ceEEEECchhhCCCCCCceeEEEE
Confidence 33445678999999999998 455555555 999999999999999999887663 799999999998875 88999999
Q ss_pred cccccee
Q 025428 237 KGTLDAI 243 (253)
Q Consensus 237 ~~~l~~i 243 (253)
..+++|+
T Consensus 96 ~~~l~~~ 102 (209)
T 2p8j_A 96 YGTIFHM 102 (209)
T ss_dssp CSCGGGS
T ss_pred cChHHhC
Confidence 9999987
No 44
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.43 E-value=5.5e-13 Score=113.97 Aligned_cols=78 Identities=22% Similarity=0.340 Sum_probs=70.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
.++.+|||+|||+|.++..+++.+..+|+|+|+|+.|++.|+++.. ..+++++++|+.+++++ ++||+|++..++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 119 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEPDAYNVVLSSLALH 119 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCTTCEEEEEEESCGG
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCCCCeEEEEEchhhh
Confidence 3678999999999999999999977699999999999999999865 34799999999998875 8999999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 120 ~~ 121 (253)
T 3g5l_A 120 YI 121 (253)
T ss_dssp GC
T ss_pred hh
Confidence 97
No 45
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.43 E-value=7.2e-13 Score=116.61 Aligned_cols=78 Identities=13% Similarity=0.246 Sum_probs=72.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l 240 (253)
.++.+|||||||+|.++..+++. |. +|+|+|+|+.|++.|++++...++. +++++++|+.++ +++||+|++..++
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~fD~v~~~~~~ 147 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--DEPVDRIVSLGAF 147 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--CCCCSEEEEESCG
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--CCCccEEEEcchH
Confidence 56789999999999999999998 74 9999999999999999999998887 799999999887 7899999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
||+
T Consensus 148 ~~~ 150 (302)
T 3hem_A 148 EHF 150 (302)
T ss_dssp GGT
T ss_pred Hhc
Confidence 998
No 46
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.42 E-value=6.9e-13 Score=116.56 Aligned_cols=81 Identities=16% Similarity=0.293 Sum_probs=70.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHh--cCCCcEEEEeCCHHHHHHHHHHHHhc--CCCceEEEEeccCCCcCC-------CCc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSK--QGFSDLTGVDYSEDAINLAQSLANRD--GFSCIKFLVDDVLDTKLE-------RQF 231 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~--~g~~~v~gvD~s~~~l~~ar~~~~~~--g~~~i~~~~~D~~~~~~~-------~~f 231 (253)
.++.+|||||||+|.++..+++ .+..+|+|+|+|+.|++.|+++++.. +..+++++++|+.++++. ++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 3678999999999999999996 33559999999999999999998876 235899999999998753 589
Q ss_pred cEEEEcccccee
Q 025428 232 QLVMDKGTLDAI 243 (253)
Q Consensus 232 D~Vi~~~~l~~i 243 (253)
|+|++..++||+
T Consensus 115 D~V~~~~~l~~~ 126 (299)
T 3g5t_A 115 DMITAVECAHWF 126 (299)
T ss_dssp EEEEEESCGGGS
T ss_pred eEEeHhhHHHHh
Confidence 999999999997
No 47
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.42 E-value=1.4e-12 Score=111.31 Aligned_cols=77 Identities=29% Similarity=0.481 Sum_probs=68.4
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEcc-ccce
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKG-TLDA 242 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~-~l~~ 242 (253)
++.+|||+|||+|.++..+++.|. +|+|+|+|+.|++.|++++...+. +++++++|+.+++++++||+|++.. ++++
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAFKNEFDAVTMFFSTIMY 118 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCCCSCEEEEEECSSGGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhcccCCCccEEEEcCCchhc
Confidence 567999999999999999999976 999999999999999999988776 7999999999987778999999864 3443
No 48
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.42 E-value=3.7e-13 Score=112.42 Aligned_cols=76 Identities=18% Similarity=0.242 Sum_probs=69.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccce
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLDA 242 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~~ 242 (253)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.|++.+++++. .+++++++|+.+++++++||+|++..++||
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVPTSIDTIVSTYAFHH 118 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCCSCCSEEEEESCGGG
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCCCCeEEEEECcchhc
Confidence 3678999999999999999999965 99999999999999999865 478999999999877789999999999998
Q ss_pred e
Q 025428 243 I 243 (253)
Q Consensus 243 i 243 (253)
+
T Consensus 119 ~ 119 (220)
T 3hnr_A 119 L 119 (220)
T ss_dssp S
T ss_pred C
Confidence 7
No 49
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.42 E-value=5.3e-13 Score=114.88 Aligned_cols=75 Identities=23% Similarity=0.293 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEcc-ccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKG-TLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~-~l~ 241 (253)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++. +++++++|+.+++++++||+|++.. +|+
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~~~~~fD~v~~~~~~l~ 122 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFSLGRRFSAVTCMFSSIG 122 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCCCSCCEEEEEECTTGGG
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCCccCCcCEEEEcCchhh
Confidence 3568999999999999999999965 89999999999999998753 7899999999988888999999998 999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 123 ~~ 124 (263)
T 3pfg_A 123 HL 124 (263)
T ss_dssp GS
T ss_pred hc
Confidence 87
No 50
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.41 E-value=1.6e-12 Score=105.54 Aligned_cols=91 Identities=20% Similarity=0.275 Sum_probs=77.0
Q ss_pred cccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCc--eEEEEeccCCCcC
Q 025428 150 DLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSC--IKFLVDDVLDTKL 227 (253)
Q Consensus 150 ~~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~--i~~~~~D~~~~~~ 227 (253)
.....+++.+.. .++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.+++++...++.+ ++++++|+.+...
T Consensus 39 ~~~~~l~~~~~~-~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (194)
T 1dus_A 39 KGTKILVENVVV-DKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK 116 (194)
T ss_dssp HHHHHHHHHCCC-CTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT
T ss_pred hHHHHHHHHccc-CCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc
Confidence 344555555543 47789999999999999999999 4599999999999999999999888876 9999999988655
Q ss_pred CCCccEEEEccccce
Q 025428 228 ERQFQLVMDKGTLDA 242 (253)
Q Consensus 228 ~~~fD~Vi~~~~l~~ 242 (253)
+++||+|+++.++|+
T Consensus 117 ~~~~D~v~~~~~~~~ 131 (194)
T 1dus_A 117 DRKYNKIITNPPIRA 131 (194)
T ss_dssp TSCEEEEEECCCSTT
T ss_pred cCCceEEEECCCccc
Confidence 578999999888775
No 51
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.41 E-value=6.1e-13 Score=113.82 Aligned_cols=78 Identities=24% Similarity=0.420 Sum_probs=70.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l 240 (253)
.++.+|||+|||+|.++..+++. +. +|+|+|+|+.|++.|+++.... .+++++++|+.+++++ ++||+|++..++
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 130 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEFPENNFDLIYSRDAI 130 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCCCTTCEEEEEEESCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCCCCCcEEEEeHHHHH
Confidence 46789999999999999999997 55 9999999999999999987654 5899999999998875 899999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
||+
T Consensus 131 ~~~ 133 (266)
T 3ujc_A 131 LAL 133 (266)
T ss_dssp GGS
T ss_pred Hhc
Confidence 998
No 52
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.40 E-value=5.3e-13 Score=113.77 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=70.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
.++.+|||||||+|.++..++..+..+|+|+|+|+.|++.+++++... .+++++++|+.+++++ ++||+|++..++|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATLPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCCCSSCEEEEEEESCGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCCCCCCeEEEEEcchhh
Confidence 467899999999999999999887668999999999999999987654 4799999999988765 7999999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 170 ~~ 171 (254)
T 1xtp_A 170 YL 171 (254)
T ss_dssp GS
T ss_pred hC
Confidence 97
No 53
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.40 E-value=1.2e-12 Score=108.53 Aligned_cols=78 Identities=17% Similarity=0.234 Sum_probs=70.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccce
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLDA 242 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~~ 242 (253)
.++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.++++++.+++ +++++++|+.+++ ++||+|+++..++.
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN--SRVDIVIMNPPFGS 124 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC--CCCSEEEECCCCSS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC--CCCCEEEEcCCCcc
Confidence 46789999999999999999999776899999999999999999998887 8999999998863 58999999998876
Q ss_pred e
Q 025428 243 I 243 (253)
Q Consensus 243 i 243 (253)
.
T Consensus 125 ~ 125 (207)
T 1wy7_A 125 Q 125 (207)
T ss_dssp S
T ss_pred c
Confidence 5
No 54
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.40 E-value=1.7e-12 Score=108.62 Aligned_cols=79 Identities=30% Similarity=0.423 Sum_probs=70.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|+++....+ .+++++++|+.+++++ ++||+|+++.+++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 3477999999999999999999966 99999999999999999988777 5899999999998765 7999999999855
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
+.
T Consensus 115 ~~ 116 (227)
T 1ve3_A 115 HF 116 (227)
T ss_dssp GC
T ss_pred hC
Confidence 43
No 55
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.40 E-value=8e-13 Score=111.83 Aligned_cols=77 Identities=29% Similarity=0.414 Sum_probs=69.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
.++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.++++. ...+++++++|+.+++++ ++||+|++..++|
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 127 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPFENEQFEAIMAINSLE 127 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSSCTTCEEEEEEESCTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCCCCCCccEEEEcChHh
Confidence 4678999999999999999999966 9999999999999999874 224799999999998875 8999999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 128 ~~ 129 (242)
T 3l8d_A 128 WT 129 (242)
T ss_dssp SS
T ss_pred hc
Confidence 87
No 56
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.40 E-value=1.3e-12 Score=109.68 Aligned_cols=80 Identities=28% Similarity=0.521 Sum_probs=72.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-----ceEEEEeccCCCcCC-CCccEEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-----CIKFLVDDVLDTKLE-RQFQLVMD 236 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-----~i~~~~~D~~~~~~~-~~fD~Vi~ 236 (253)
.++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.+++++...++. +++++++|+..++++ ++||+|++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 3678999999999999999999966 9999999999999999998877652 589999999998875 89999999
Q ss_pred cccccee
Q 025428 237 KGTLDAI 243 (253)
Q Consensus 237 ~~~l~~i 243 (253)
..+++++
T Consensus 108 ~~~l~~~ 114 (235)
T 3sm3_A 108 QAFLTSV 114 (235)
T ss_dssp ESCGGGC
T ss_pred cchhhcC
Confidence 9999987
No 57
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.39 E-value=2.2e-12 Score=107.90 Aligned_cols=77 Identities=17% Similarity=0.055 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCc-CCCCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTK-LERQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~-~~~~fD~Vi~~~~l 240 (253)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|+++++.+++. +++++++|+.+.. ...+||+|++...+
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~ 132 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG 132 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc
Confidence 57789999999999999999999 449999999999999999999999998 8999999998843 33689999987644
No 58
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.39 E-value=6.5e-13 Score=109.73 Aligned_cols=73 Identities=18% Similarity=0.323 Sum_probs=67.2
Q ss_pred CCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEcccccee
Q 025428 165 SWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLDAI 243 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~~i 243 (253)
+.+|||+|||+|.++..++..|. +++|+|+|+.|++.++++. .+++++++|+.+++++ ++||+|++..+++|+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 115 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH-----PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHM 115 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC-----TTSEEECCCGGGGGGSCCCEEEEEEESSSTTC
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC-----CCCeEEeCcccccccCCCCeEEEEehhhHhcC
Confidence 78999999999999999999976 9999999999999999873 4789999999998865 899999999999997
No 59
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.39 E-value=1.1e-12 Score=108.53 Aligned_cols=75 Identities=27% Similarity=0.395 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccce
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLDA 242 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~~ 242 (253)
.++.+|||+|||+|.++..++..|..+|+|+|+|+.|++.|++++. +++++++|+.+++ ++||+|+++.++|+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~--~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS--GKYDTWIMNPPFGS 122 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC--CCEEEEEECCCC--
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC--CCeeEEEECCCchh
Confidence 4678999999999999999999877689999999999999999864 7899999999864 78999999999998
Q ss_pred ec
Q 025428 243 IG 244 (253)
Q Consensus 243 i~ 244 (253)
+.
T Consensus 123 ~~ 124 (200)
T 1ne2_A 123 VV 124 (200)
T ss_dssp --
T ss_pred cc
Confidence 73
No 60
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.38 E-value=6.5e-13 Score=116.95 Aligned_cols=83 Identities=18% Similarity=0.249 Sum_probs=68.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCC-----------------------------
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGF----------------------------- 212 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~----------------------------- 212 (253)
.++.+|||||||+|.++..++.. +..+|+|+|+|+.||+.|++++...+.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 46789999999999999999998 445999999999999999998765432
Q ss_pred -----------------------------CceEEEEeccCCCc------CCCCccEEEEccccceecc
Q 025428 213 -----------------------------SCIKFLVDDVLDTK------LERQFQLVMDKGTLDAIGL 245 (253)
Q Consensus 213 -----------------------------~~i~~~~~D~~~~~------~~~~fD~Vi~~~~l~~i~~ 245 (253)
.+++|+++|+.... ..++||+|++..+++|+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl 192 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHL 192 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhh
Confidence 27999999998765 3489999999999988753
No 61
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=2.2e-12 Score=109.75 Aligned_cols=79 Identities=19% Similarity=0.179 Sum_probs=68.4
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC------CCccEEE
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE------RQFQLVM 235 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~------~~fD~Vi 235 (253)
..++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|++++. ..+++++++|+.+++.. ..||+|+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~ 129 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT---AANISYRLLDGLVPEQAAQIHSEIGDANIY 129 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC---CTTEEEEECCTTCHHHHHHHHHHHCSCEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc---ccCceEEECcccccccccccccccCccEEE
Confidence 35678999999999999999999976 99999999999999999862 23799999999987542 2489999
Q ss_pred Eccccceec
Q 025428 236 DKGTLDAIG 244 (253)
Q Consensus 236 ~~~~l~~i~ 244 (253)
+..++|++.
T Consensus 130 ~~~~~~~~~ 138 (245)
T 3ggd_A 130 MRTGFHHIP 138 (245)
T ss_dssp EESSSTTSC
T ss_pred EcchhhcCC
Confidence 999999983
No 62
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=1.6e-12 Score=112.95 Aligned_cols=84 Identities=19% Similarity=0.351 Sum_probs=72.2
Q ss_pred chHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCcc
Q 025428 153 SEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQ 232 (253)
Q Consensus 153 ~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD 232 (253)
..+++.+.. .++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.++++. .++.++++|+.+++++++||
T Consensus 47 ~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~fD 119 (279)
T 3ccf_A 47 EDLLQLLNP-QPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRVDKPLD 119 (279)
T ss_dssp CHHHHHHCC-CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCCSSCEE
T ss_pred HHHHHHhCC-CCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCcCCCcC
Confidence 344444432 4678999999999999999999754 9999999999999999875 47899999999988778999
Q ss_pred EEEEcccccee
Q 025428 233 LVMDKGTLDAI 243 (253)
Q Consensus 233 ~Vi~~~~l~~i 243 (253)
+|++..++||+
T Consensus 120 ~v~~~~~l~~~ 130 (279)
T 3ccf_A 120 AVFSNAMLHWV 130 (279)
T ss_dssp EEEEESCGGGC
T ss_pred EEEEcchhhhC
Confidence 99999999987
No 63
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.38 E-value=1.3e-12 Score=112.81 Aligned_cols=91 Identities=15% Similarity=0.185 Sum_probs=75.7
Q ss_pred chHHHHhccCC-CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcC---
Q 025428 153 SEPVEENDKYL-SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKL--- 227 (253)
Q Consensus 153 ~~l~~~l~~~~-~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~--- 227 (253)
+.++..+.... ++.+|||+|||+|.++..++.++..+|+|+|+++.+++.|++++..+++. +++++++|+.++..
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~ 116 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIP 116 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSC
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhc
Confidence 34455555555 78899999999999999999996559999999999999999999999987 59999999998763
Q ss_pred CCCccEEEEcccccee
Q 025428 228 ERQFQLVMDKGTLDAI 243 (253)
Q Consensus 228 ~~~fD~Vi~~~~l~~i 243 (253)
.++||+|+++..+...
T Consensus 117 ~~~fD~Ii~npPy~~~ 132 (259)
T 3lpm_A 117 KERADIVTCNPPYFAT 132 (259)
T ss_dssp TTCEEEEEECCCC---
T ss_pred cCCccEEEECCCCCCC
Confidence 4899999998776544
No 64
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.38 E-value=3.4e-12 Score=105.84 Aligned_cols=79 Identities=10% Similarity=0.032 Sum_probs=70.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l 240 (253)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|+++++..++.+++++++|+.+.... ++||+|++..++
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~ 118 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSG 118 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCC
Confidence 577899999999999999999985 359999999999999999999998888899999999776443 789999998875
Q ss_pred c
Q 025428 241 D 241 (253)
Q Consensus 241 ~ 241 (253)
+
T Consensus 119 ~ 119 (204)
T 3e05_A 119 G 119 (204)
T ss_dssp T
T ss_pred c
Confidence 4
No 65
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.38 E-value=5.2e-13 Score=115.43 Aligned_cols=107 Identities=21% Similarity=0.247 Sum_probs=81.8
Q ss_pred hcceeecCCCcCCccccc-cchHHHHhccC-CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcC
Q 025428 134 SLCISISQGHMLNHVEDL-KSEPVEENDKY-LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDG 211 (253)
Q Consensus 134 ~~~~~i~~~~~~~~~~~~-~~~l~~~l~~~-~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g 211 (253)
.+.+.+.++..++++.+. +..+++.+... .++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.|++++..++
T Consensus 88 ~~~~~l~p~~~fgtg~~~tt~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~ 166 (254)
T 2nxc_A 88 EIPLVIEPGMAFGTGHHETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNG 166 (254)
T ss_dssp SEEEECCCC-----CCSHHHHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTT
T ss_pred ceEEEECCCccccCCCCHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcC
Confidence 345667777777765544 44555555443 5678999999999999999999987 99999999999999999999988
Q ss_pred CCceEEEEeccCCCcCCCCccEEEEccccce
Q 025428 212 FSCIKFLVDDVLDTKLERQFQLVMDKGTLDA 242 (253)
Q Consensus 212 ~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~~ 242 (253)
+. ++++++|+.+....++||+|+++...++
T Consensus 167 ~~-v~~~~~d~~~~~~~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 167 VR-PRFLEGSLEAALPFGPFDLLVANLYAEL 196 (254)
T ss_dssp CC-CEEEESCHHHHGGGCCEEEEEEECCHHH
T ss_pred Cc-EEEEECChhhcCcCCCCCEEEECCcHHH
Confidence 86 9999999877422478999999876554
No 66
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.38 E-value=2.2e-12 Score=106.48 Aligned_cols=83 Identities=19% Similarity=0.262 Sum_probs=70.9
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CC
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQ 230 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~ 230 (253)
...+..++....++ +|||+|||+|.++..+++.|. +++|+|+|+.|++.|++++...+. +++++++|+.+++++ ++
T Consensus 18 ~~~l~~~~~~~~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~ 94 (202)
T 2kw5_A 18 NDFLVSVANQIPQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDIVADA 94 (202)
T ss_dssp CSSHHHHHHHSCSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSCCTTT
T ss_pred hHHHHHHHHhCCCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCCCcCC
Confidence 33445555545566 999999999999999999976 999999999999999999988776 899999999998765 89
Q ss_pred ccEEEEc
Q 025428 231 FQLVMDK 237 (253)
Q Consensus 231 fD~Vi~~ 237 (253)
||+|++.
T Consensus 95 fD~v~~~ 101 (202)
T 2kw5_A 95 WEGIVSI 101 (202)
T ss_dssp CSEEEEE
T ss_pred ccEEEEE
Confidence 9999984
No 67
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.38 E-value=9.8e-13 Score=115.59 Aligned_cols=79 Identities=18% Similarity=0.299 Sum_probs=69.3
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC---CceEEEEeccCCCcCCCCccEEEEc-cc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF---SCIKFLVDDVLDTKLERQFQLVMDK-GT 239 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~---~~i~~~~~D~~~~~~~~~fD~Vi~~-~~ 239 (253)
++.+|||||||+|.++..+++.|. +|+|+|+|+.|++.|++++...++ .+++++++|+.+++++++||+|++. .+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSGS 160 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCcc
Confidence 345999999999999999999975 899999999999999999987764 4799999999998888999999864 56
Q ss_pred ccee
Q 025428 240 LDAI 243 (253)
Q Consensus 240 l~~i 243 (253)
+|++
T Consensus 161 ~~~~ 164 (299)
T 3g2m_A 161 INEL 164 (299)
T ss_dssp HTTS
T ss_pred cccC
Confidence 6654
No 68
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.37 E-value=8.3e-13 Score=105.63 Aligned_cols=88 Identities=15% Similarity=0.131 Sum_probs=72.3
Q ss_pred cchHHHHhccCC-CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---
Q 025428 152 KSEPVEENDKYL-SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL--- 227 (253)
Q Consensus 152 ~~~l~~~l~~~~-~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~--- 227 (253)
...++..+.... ++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|++++..+++ +++++++|+.+...
T Consensus 28 ~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~ 105 (171)
T 1ws6_A 28 RKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAK 105 (171)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhh
Confidence 334444444322 678999999999999999999977 599999999999999999998888 89999999987421
Q ss_pred --CCCccEEEEccccc
Q 025428 228 --ERQFQLVMDKGTLD 241 (253)
Q Consensus 228 --~~~fD~Vi~~~~l~ 241 (253)
.++||+|+++.+++
T Consensus 106 ~~~~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 106 AQGERFTVAFMAPPYA 121 (171)
T ss_dssp HTTCCEEEEEECCCTT
T ss_pred ccCCceEEEEECCCCc
Confidence 23899999988776
No 69
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.37 E-value=1.9e-12 Score=109.44 Aligned_cols=78 Identities=22% Similarity=0.334 Sum_probs=69.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
.++.+|||||||+|.++..+++.|..+++|+|+|+.|++.++++... .+++++++|+.+++++ ++||+|++..++|
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 118 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHLPQDSFDLAYSSLALH 118 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCCCTTCEEEEEEESCGG
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccCCCCCceEEEEecccc
Confidence 46789999999999999999999766999999999999999987643 3689999999988764 8999999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 119 ~~ 120 (243)
T 3bkw_A 119 YV 120 (243)
T ss_dssp GC
T ss_pred cc
Confidence 87
No 70
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.37 E-value=2.8e-12 Score=115.85 Aligned_cols=80 Identities=20% Similarity=0.293 Sum_probs=72.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
.++.+|||||||+|.++..+++.|..+|+|+|+|+ |++.|+++++.+++ .+++++++|+.+++++++||+|++..+++
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBT
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchh
Confidence 46789999999999999999999777999999997 99999999999888 47999999999987778999999998877
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 128 ~~ 129 (348)
T 2y1w_A 128 ML 129 (348)
T ss_dssp TB
T ss_pred cC
Confidence 76
No 71
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=1.9e-12 Score=104.36 Aligned_cols=84 Identities=19% Similarity=0.285 Sum_probs=71.1
Q ss_pred chHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCc
Q 025428 153 SEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQF 231 (253)
Q Consensus 153 ~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~f 231 (253)
..+.+.+. ..++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.+++++..+++.+++++++|+.+ +++ ++|
T Consensus 25 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~ 101 (183)
T 2yxd_A 25 AVSIGKLN-LNKDDVVVDVGCGSGGMTVEIAKR-CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEF 101 (183)
T ss_dssp HHHHHHHC-CCTTCEEEEESCCCSHHHHHHHTT-SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCC
T ss_pred HHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCC
Confidence 34444443 356789999999999999999994 55999999999999999999999988889999999988 444 789
Q ss_pred cEEEEccc
Q 025428 232 QLVMDKGT 239 (253)
Q Consensus 232 D~Vi~~~~ 239 (253)
|+|+++.+
T Consensus 102 D~i~~~~~ 109 (183)
T 2yxd_A 102 NKAFIGGT 109 (183)
T ss_dssp SEEEECSC
T ss_pred cEEEECCc
Confidence 99999876
No 72
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.37 E-value=1.3e-13 Score=119.39 Aligned_cols=83 Identities=18% Similarity=0.230 Sum_probs=67.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcC--C---------------------------C
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDG--F---------------------------S 213 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g--~---------------------------~ 213 (253)
.++.+|||||||+|.++..++..|+.+|+|+|+|+.||+.|+++++... + .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 4677999999999999888888887789999999999999998875431 0 1
Q ss_pred ceE-EEEeccCCC-cC----CCCccEEEEccccceecc
Q 025428 214 CIK-FLVDDVLDT-KL----ERQFQLVMDKGTLDAIGL 245 (253)
Q Consensus 214 ~i~-~~~~D~~~~-~~----~~~fD~Vi~~~~l~~i~~ 245 (253)
++. ++++|+.+. ++ .++||+|++..+|||+..
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~ 171 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACC 171 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcC
Confidence 244 899999884 22 368999999999999743
No 73
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.36 E-value=3e-12 Score=115.72 Aligned_cols=80 Identities=18% Similarity=0.347 Sum_probs=71.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcCC-CCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKLE-RQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~-~~fD~Vi~~~~l 240 (253)
.++.+|||||||+|.++..+++.|..+|+|+|+|+ |++.|+++++.+++.+ ++++++|+.+++++ ++||+|++..+.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 46789999999999999999999877999999995 9999999999998875 99999999999876 899999997765
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
+++
T Consensus 144 ~~l 146 (349)
T 3q7e_A 144 YCL 146 (349)
T ss_dssp BTB
T ss_pred ccc
Confidence 554
No 74
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.36 E-value=2.4e-12 Score=117.48 Aligned_cols=80 Identities=19% Similarity=0.320 Sum_probs=72.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
.++.+|||||||+|.++..+++.|..+|+|+|+| .|++.|+++++.+++.+ ++++++|+.+++++++||+|++..+.+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMGY 140 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCBT
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChhh
Confidence 5678999999999999999999988799999999 99999999999999864 999999999988778999999976555
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
++
T Consensus 141 ~l 142 (376)
T 3r0q_C 141 FL 142 (376)
T ss_dssp TB
T ss_pred cc
Confidence 54
No 75
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.36 E-value=9.7e-13 Score=111.79 Aligned_cols=76 Identities=13% Similarity=0.122 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC--cCC-CCccEEEE-cc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT--KLE-RQFQLVMD-KG 238 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~--~~~-~~fD~Vi~-~~ 238 (253)
.++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.|+++.+..+ .+++++++|+.++ +++ ++||+|++ ..
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 4677999999999999999988766699999999999999999988777 4899999999887 665 89999999 44
Q ss_pred c
Q 025428 239 T 239 (253)
Q Consensus 239 ~ 239 (253)
.
T Consensus 138 ~ 138 (236)
T 1zx0_A 138 P 138 (236)
T ss_dssp C
T ss_pred c
Confidence 4
No 76
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.36 E-value=1.5e-12 Score=113.55 Aligned_cols=74 Identities=19% Similarity=0.324 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc------CCCCccEEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK------LERQFQLVMD 236 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~------~~~~fD~Vi~ 236 (253)
.++.+|||||||+|.++..++++|. +|+|+|+|+.|++.|++++... ++++++.+.. .+++||+|++
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~------~v~~~~~~~~~~~~~~~~~~fD~Vv~ 116 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR------CVTIDLLDITAEIPKELAGHFDFVLN 116 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS------CCEEEECCTTSCCCGGGTTCCSEEEE
T ss_pred CCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc------cceeeeeecccccccccCCCccEEEE
Confidence 5678999999999999999999976 9999999999999999987654 2233333332 2478999999
Q ss_pred cccccee
Q 025428 237 KGTLDAI 243 (253)
Q Consensus 237 ~~~l~~i 243 (253)
+.++||+
T Consensus 117 ~~~l~~~ 123 (261)
T 3iv6_A 117 DRLINRF 123 (261)
T ss_dssp ESCGGGS
T ss_pred hhhhHhC
Confidence 9999986
No 77
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.36 E-value=1.9e-12 Score=118.37 Aligned_cols=74 Identities=23% Similarity=0.347 Sum_probs=68.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDK 237 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~ 237 (253)
.++++|||||||||.++..+++.|+++|+|||.|+ |++.|+++++.+|+. +|+++++|+.++.++++||+|++.
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE 156 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSE 156 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECC
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEee
Confidence 36789999999999999999999999999999996 899999999999987 499999999999888999999984
No 78
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.36 E-value=8.3e-13 Score=109.80 Aligned_cols=78 Identities=15% Similarity=0.123 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc--CCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ--GFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~--g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~ 239 (253)
.+..+|||+|||+|.++..++.. +. +++++|+|+.|++.+++++..+|+. ++++ .|......+++||+|+...+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 46789999999999999999877 34 9999999999999999999999986 4666 67666556689999999999
Q ss_pred ccee
Q 025428 240 LDAI 243 (253)
Q Consensus 240 l~~i 243 (253)
||++
T Consensus 125 LHlL 128 (200)
T 3fzg_A 125 LPVL 128 (200)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 9998
No 79
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.36 E-value=3.3e-12 Score=107.95 Aligned_cols=78 Identities=26% Similarity=0.375 Sum_probs=70.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEcc-ccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKG-TLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~-~l~ 241 (253)
.++.+|||+|||+|.++..+++. .+++|+|+|+.|++.|++++...+ .+++++++|+.+++++++||+|++.. +++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELELPEPVDAITILCDSLN 108 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCCSSCEEEEEECTTGGG
T ss_pred CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCCCCCcCEEEEeCCchh
Confidence 35689999999999999999988 499999999999999999988776 47999999999987778999999986 888
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 109 ~~ 110 (243)
T 3d2l_A 109 YL 110 (243)
T ss_dssp GC
T ss_pred hc
Confidence 87
No 80
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.36 E-value=2e-12 Score=113.17 Aligned_cols=77 Identities=12% Similarity=0.006 Sum_probs=70.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcCCCCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKLERQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~~~fD~Vi~~~~ 239 (253)
.++.+|||+|||+|.++..+++.|..+|+|+|+|+.|++.|+++++.+++.+ ++++++|+.++...++||+|+++..
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p 201 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc
Confidence 4578999999999999999999977579999999999999999999999875 9999999999877789999998654
No 81
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.35 E-value=1.1e-12 Score=115.75 Aligned_cols=81 Identities=20% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHH--hcCCCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcCCCCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELS--KQGFSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKLERQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la--~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~~~fD~Vi~~~~ 239 (253)
.++.+|||||||+|.++..++ ..+..+|+|+|+|+.|++.|++++...++.+ ++++++|+.+++++++||+|+++.+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 196 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNGL 196 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCSS
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECCh
Confidence 577899999999999999995 3334499999999999999999998888764 9999999999887799999999999
Q ss_pred ccee
Q 025428 240 LDAI 243 (253)
Q Consensus 240 l~~i 243 (253)
+||+
T Consensus 197 ~~~~ 200 (305)
T 3ocj_A 197 NIYE 200 (305)
T ss_dssp GGGC
T ss_pred hhhc
Confidence 9987
No 82
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=7.8e-13 Score=114.13 Aligned_cols=74 Identities=18% Similarity=0.155 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.++++. +++++++|+.+++++ ++||+|++..++|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 105 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLALPDKSVDGVISILAIH 105 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCSCTTCBSEEEEESCGG
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCCCCCCEeEEEEcchHh
Confidence 4678999999999999999999765 9999999999999887653 899999999998875 8999999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 106 ~~ 107 (261)
T 3ege_A 106 HF 107 (261)
T ss_dssp GC
T ss_pred hc
Confidence 97
No 83
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.35 E-value=3.2e-12 Score=107.72 Aligned_cols=78 Identities=23% Similarity=0.252 Sum_probs=69.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc-CCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK-LERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~-~~~~fD~Vi~~~~l~ 241 (253)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++...+ +++++++|+.+.. ..++||+|++..+++
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYEEEKPYDRVVVWATAP 145 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCGGGCCEEEEEESSBBS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccccCCCccEEEECCcHH
Confidence 567899999999999999999996 599999999999999999987766 8999999998733 347899999999998
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
++
T Consensus 146 ~~ 147 (231)
T 1vbf_A 146 TL 147 (231)
T ss_dssp SC
T ss_pred HH
Confidence 86
No 84
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.35 E-value=3e-12 Score=111.52 Aligned_cols=78 Identities=15% Similarity=0.276 Sum_probs=70.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l 240 (253)
.++.+|||||||+|.++..+++. |. +|+|+|+|+.+++.+++++...++. +++++++|+.+++ ++||+|++..++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~fD~v~~~~~l 139 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--EPVDRIVSIGAF 139 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--CCCSEEEEESCG
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--CCeeEEEEeCch
Confidence 46789999999999999999954 66 9999999999999999999888765 7999999998765 899999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
+|+
T Consensus 140 ~~~ 142 (287)
T 1kpg_A 140 EHF 142 (287)
T ss_dssp GGT
T ss_pred hhc
Confidence 998
No 85
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.35 E-value=2.5e-12 Score=103.63 Aligned_cols=79 Identities=20% Similarity=0.123 Sum_probs=67.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCc-CC-CCccEEEEcc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTK-LE-RQFQLVMDKG 238 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~-~~-~~fD~Vi~~~ 238 (253)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++...++. ++ ++++|+.+.. .. ++||+|++..
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECC
Confidence 56779999999999999999988 3449999999999999999999988887 78 8899986532 22 7899999999
Q ss_pred ccce
Q 025428 239 TLDA 242 (253)
Q Consensus 239 ~l~~ 242 (253)
++++
T Consensus 103 ~~~~ 106 (178)
T 3hm2_A 103 GLTA 106 (178)
T ss_dssp -TTC
T ss_pred cccH
Confidence 8876
No 86
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.35 E-value=4.2e-12 Score=106.26 Aligned_cols=77 Identities=19% Similarity=0.242 Sum_probs=68.1
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc--CC-CCccEEEEccc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK--LE-RQFQLVMDKGT 239 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~--~~-~~fD~Vi~~~~ 239 (253)
++.+|||||||+|.++..+++.. ..+++|+|+|+.+++.|++++...++.+++++++|+.+++ ++ ++||+|+++..
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 56799999999999999999883 3499999999999999999999988889999999999876 43 78999998754
Q ss_pred c
Q 025428 240 L 240 (253)
Q Consensus 240 l 240 (253)
.
T Consensus 121 ~ 121 (214)
T 1yzh_A 121 D 121 (214)
T ss_dssp C
T ss_pred C
Confidence 3
No 87
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.35 E-value=3.6e-12 Score=106.31 Aligned_cols=81 Identities=15% Similarity=0.120 Sum_probs=71.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCC--CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-CCCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGF--SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-ERQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~--~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-~~~fD~Vi~~~~ 239 (253)
.++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.+++++...++.+++++++|+..... .++||+|++..+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 155 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAA 155 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCc
Confidence 5778999999999999999999842 4999999999999999999988888889999999865433 478999999999
Q ss_pred ccee
Q 025428 240 LDAI 243 (253)
Q Consensus 240 l~~i 243 (253)
++++
T Consensus 156 ~~~~ 159 (215)
T 2yxe_A 156 GPKI 159 (215)
T ss_dssp BSSC
T ss_pred hHHH
Confidence 9876
No 88
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.35 E-value=3e-12 Score=117.29 Aligned_cols=90 Identities=20% Similarity=0.280 Sum_probs=77.3
Q ss_pred ccchHHHHhccC-----CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC
Q 025428 151 LKSEPVEENDKY-----LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT 225 (253)
Q Consensus 151 ~~~~l~~~l~~~-----~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~ 225 (253)
..+.+++.+... .++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|++++..+++ +++++++|+.+.
T Consensus 215 ~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~-~v~~~~~D~~~~ 292 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANAL-KAQALHSDVDEA 292 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTC-CCEEEECSTTTT
T ss_pred HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC-CeEEEEcchhhc
Confidence 344555555432 3678999999999999999999966 999999999999999999999887 599999999998
Q ss_pred cCC-CCccEEEEccccce
Q 025428 226 KLE-RQFQLVMDKGTLDA 242 (253)
Q Consensus 226 ~~~-~~fD~Vi~~~~l~~ 242 (253)
..+ ++||+|+++.++|+
T Consensus 293 ~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 293 LTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp SCTTCCEEEEEECCCCCT
T ss_pred cccCCCeEEEEECCchhh
Confidence 765 89999999999887
No 89
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.34 E-value=5.3e-12 Score=113.74 Aligned_cols=76 Identities=22% Similarity=0.380 Sum_probs=69.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEeccCCCcCC-CCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVDDVLDTKLE-RQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~D~~~~~~~-~~fD~Vi~~~~ 239 (253)
.++.+|||||||+|.++..+++.|..+|+|+|+|+ |++.|+++++.+++ .+++++++|+.+++++ ++||+|++..+
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 46789999999999999999999877999999997 99999999999988 4799999999998876 89999999764
No 90
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.34 E-value=2.7e-12 Score=113.96 Aligned_cols=80 Identities=18% Similarity=0.165 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC------ceEEEEecc------CCC--cC-C
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS------CIKFLVDDV------LDT--KL-E 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~------~i~~~~~D~------~~~--~~-~ 228 (253)
++.+|||||||+|..+..++..+..+|+|+|+|+.||+.|+++....+.. +++|.+.|+ .++ ++ .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 46799999999998777776665559999999999999999998766542 367888888 222 12 3
Q ss_pred CCccEEEEcccccee
Q 025428 229 RQFQLVMDKGTLDAI 243 (253)
Q Consensus 229 ~~fD~Vi~~~~l~~i 243 (253)
++||+|+|..++|++
T Consensus 128 ~~FD~V~~~~~lhy~ 142 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYS 142 (302)
T ss_dssp SCEEEEEEESCGGGT
T ss_pred CCeeEEEECchHHHh
Confidence 799999999999886
No 91
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.34 E-value=2.7e-12 Score=111.95 Aligned_cols=81 Identities=20% Similarity=0.194 Sum_probs=69.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC----CceEEEEeccCCCc---C-CCCccEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF----SCIKFLVDDVLDTK---L-ERQFQLV 234 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~----~~i~~~~~D~~~~~---~-~~~fD~V 234 (253)
.++.+|||||||+|.++..+++.|. +|+|+|+|+.|++.|+++....+. .++.+.++|+.+++ + +++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 3668999999999999999999977 999999999999999998754332 36889999998876 4 4899999
Q ss_pred EEc-cccceec
Q 025428 235 MDK-GTLDAIG 244 (253)
Q Consensus 235 i~~-~~l~~i~ 244 (253)
++. .+++|+.
T Consensus 135 ~~~g~~l~~~~ 145 (293)
T 3thr_A 135 ICLGNSFAHLP 145 (293)
T ss_dssp EECTTCGGGSC
T ss_pred EEcChHHhhcC
Confidence 998 7999874
No 92
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.34 E-value=4.4e-12 Score=112.92 Aligned_cols=82 Identities=20% Similarity=0.238 Sum_probs=72.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCC--CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-CCCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGF--SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-ERQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~--~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-~~~fD~Vi~~~~ 239 (253)
.++.+|||||||+|.++..+++.+. .+|+|+|+|+++++.|+++++..|+.+++++++|+.+... .++||+|++..+
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~ 153 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVG 153 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSB
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCC
Confidence 5778999999999999999998843 3599999999999999999999998889999999988544 478999999999
Q ss_pred cceec
Q 025428 240 LDAIG 244 (253)
Q Consensus 240 l~~i~ 244 (253)
++++.
T Consensus 154 ~~~~~ 158 (317)
T 1dl5_A 154 VDEVP 158 (317)
T ss_dssp BSCCC
T ss_pred HHHHH
Confidence 98863
No 93
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.34 E-value=2.8e-12 Score=105.54 Aligned_cols=78 Identities=17% Similarity=0.128 Sum_probs=68.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc--CCCcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEeccCCCc--CCCCccEEEEc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ--GFSDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVDDVLDTK--LERQFQLVMDK 237 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~--g~~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~D~~~~~--~~~~fD~Vi~~ 237 (253)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|+++++.+++ .+++++++|+.+++ .+++||+|+++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 46789999999999999999987 334999999999999999999999888 57999999998875 34889999987
Q ss_pred ccc
Q 025428 238 GTL 240 (253)
Q Consensus 238 ~~l 240 (253)
..+
T Consensus 101 ~~~ 103 (197)
T 3eey_A 101 LGY 103 (197)
T ss_dssp ESB
T ss_pred CCc
Confidence 655
No 94
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.33 E-value=2.8e-12 Score=110.65 Aligned_cols=78 Identities=15% Similarity=0.107 Sum_probs=67.8
Q ss_pred cCCCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcCCC-CccEEEEc
Q 025428 161 KYLSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKLER-QFQLVMDK 237 (253)
Q Consensus 161 ~~~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~~-~fD~Vi~~ 237 (253)
-..++.+|||||||+|.++..+++.+ ..+|+++|+++.+++.|++|++.+|+.+ ++++++|..+...++ +||+|+..
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Ivia 97 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIA 97 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred hCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEe
Confidence 33577899999999999999999986 3489999999999999999999999975 999999999876554 69998864
Q ss_pred c
Q 025428 238 G 238 (253)
Q Consensus 238 ~ 238 (253)
+
T Consensus 98 g 98 (244)
T 3gnl_A 98 G 98 (244)
T ss_dssp E
T ss_pred C
Confidence 4
No 95
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.33 E-value=3.2e-12 Score=109.35 Aligned_cols=78 Identities=15% Similarity=0.125 Sum_probs=68.0
Q ss_pred cCCCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcCC-CCccEEEEc
Q 025428 161 KYLSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKLE-RQFQLVMDK 237 (253)
Q Consensus 161 ~~~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~-~~fD~Vi~~ 237 (253)
-..++.+|||||||+|.++..+++.+ ..+|+++|+++.+++.|++|++.+|+.+ ++++++|..+...+ .+||+|+..
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~Ivia 97 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITIC 97 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred hCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEe
Confidence 33577899999999999999999986 4489999999999999999999999974 99999999987655 379998764
Q ss_pred c
Q 025428 238 G 238 (253)
Q Consensus 238 ~ 238 (253)
+
T Consensus 98 G 98 (230)
T 3lec_A 98 G 98 (230)
T ss_dssp E
T ss_pred C
Confidence 4
No 96
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.33 E-value=2.1e-12 Score=111.54 Aligned_cols=77 Identities=17% Similarity=0.161 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----CCCccEEEEc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----ERQFQLVMDK 237 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----~~~fD~Vi~~ 237 (253)
.++.+|||||||+|..+..++.. +..+|+++|+|+.+++.|+++++.+++.|++++++|+.+++. .++||+|+++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 35679999999999999999987 445999999999999999999999999889999999988764 3789999997
Q ss_pred cc
Q 025428 238 GT 239 (253)
Q Consensus 238 ~~ 239 (253)
.+
T Consensus 159 a~ 160 (249)
T 3g89_A 159 AV 160 (249)
T ss_dssp SS
T ss_pred Cc
Confidence 54
No 97
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.33 E-value=4.6e-12 Score=112.13 Aligned_cols=78 Identities=13% Similarity=0.223 Sum_probs=71.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l 240 (253)
.++.+|||||||+|.++..+++. |. +|+|+|+|+.|++.|++++...++. +++++++|+.+++ ++||+|++..++
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~fD~v~~~~~l 165 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--EPVDRIVSIEAF 165 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--CCCSEEEEESCG
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--CCcCEEEEeChH
Confidence 46789999999999999999988 76 9999999999999999999888875 5999999998774 789999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
+|+
T Consensus 166 ~~~ 168 (318)
T 2fk8_A 166 EHF 168 (318)
T ss_dssp GGT
T ss_pred Hhc
Confidence 998
No 98
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.33 E-value=9.1e-12 Score=113.81 Aligned_cols=91 Identities=15% Similarity=0.148 Sum_probs=73.9
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCC---ceEEEEeccCCCcC
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFS---CIKFLVDDVLDTKL 227 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~---~i~~~~~D~~~~~~ 227 (253)
.+.+++.+.. .++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.|++.|+++++.+++. +++++.+|+.+...
T Consensus 211 ~~~ll~~l~~-~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~ 289 (375)
T 4dcm_A 211 ARFFMQHLPE-NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 289 (375)
T ss_dssp HHHHHHTCCC-SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC
T ss_pred HHHHHHhCcc-cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC
Confidence 3345555544 345899999999999999999984 459999999999999999999998875 58999999998544
Q ss_pred CCCccEEEEcccccee
Q 025428 228 ERQFQLVMDKGTLDAI 243 (253)
Q Consensus 228 ~~~fD~Vi~~~~l~~i 243 (253)
+++||+|+++..+|+.
T Consensus 290 ~~~fD~Ii~nppfh~~ 305 (375)
T 4dcm_A 290 PFRFNAVLCNPPFHQQ 305 (375)
T ss_dssp TTCEEEEEECCCC---
T ss_pred CCCeeEEEECCCcccC
Confidence 5799999999998863
No 99
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.33 E-value=1e-12 Score=111.68 Aligned_cols=74 Identities=26% Similarity=0.449 Sum_probs=65.1
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC--cCC-CCccEEEEcc
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT--KLE-RQFQLVMDKG 238 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~--~~~-~~fD~Vi~~~ 238 (253)
..++.+|||||||+|.++..+++.|. +|+|+|+|+.|++.++++ ++++++|+.+. +++ ++||+|++..
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~~~~fD~i~~~~ 109 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLPDKYLDGVMISH 109 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSCTTCBSEEEEES
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcCCCCeeEEEECC
Confidence 35678999999999999999999976 899999999999999875 78899998875 444 8999999999
Q ss_pred ccceec
Q 025428 239 TLDAIG 244 (253)
Q Consensus 239 ~l~~i~ 244 (253)
+++|+.
T Consensus 110 ~l~~~~ 115 (240)
T 3dli_A 110 FVEHLD 115 (240)
T ss_dssp CGGGSC
T ss_pred chhhCC
Confidence 999984
No 100
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.33 E-value=6.1e-12 Score=107.40 Aligned_cols=76 Identities=20% Similarity=0.288 Sum_probs=67.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
.++.+|||+|||+|.++..+++. +..+++|+|+|+.|++.++++ ..+++++++|+.+++.+++||+|+++.++|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~ 106 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWKPAQKADLLYANAVFQ 106 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCCCSSCEEEEEEESCGG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcCccCCcCEEEEeCchh
Confidence 46679999999999999999988 234999999999999999987 247999999999987558999999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 107 ~~ 108 (259)
T 2p35_A 107 WV 108 (259)
T ss_dssp GS
T ss_pred hC
Confidence 97
No 101
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=8.4e-12 Score=108.98 Aligned_cols=83 Identities=13% Similarity=0.005 Sum_probs=71.8
Q ss_pred HhccCCCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEE
Q 025428 158 ENDKYLSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMD 236 (253)
Q Consensus 158 ~l~~~~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~ 236 (253)
.+....++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++++.+++.++.++++|+.+.+..++||+|++
T Consensus 113 ~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~ 192 (272)
T 3a27_A 113 MAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIM 192 (272)
T ss_dssp HHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEE
T ss_pred HHHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEE
Confidence 3444567889999999999999999998 345999999999999999999999999899999999998833478999998
Q ss_pred cccc
Q 025428 237 KGTL 240 (253)
Q Consensus 237 ~~~l 240 (253)
+...
T Consensus 193 d~p~ 196 (272)
T 3a27_A 193 GYVH 196 (272)
T ss_dssp CCCS
T ss_pred CCcc
Confidence 7653
No 102
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.32 E-value=7.9e-12 Score=105.05 Aligned_cols=75 Identities=17% Similarity=0.180 Sum_probs=66.2
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc--C-CCCccEEEEcc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK--L-ERQFQLVMDKG 238 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~--~-~~~fD~Vi~~~ 238 (253)
.+.+|||||||+|.++..+++. +..+++|+|+|+.|++.|++++...++.|++++++|+.+++ + +++||.|+++.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 5679999999999999999987 33489999999999999999999999889999999998865 4 37899998754
No 103
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.32 E-value=4.2e-12 Score=125.06 Aligned_cols=82 Identities=17% Similarity=0.245 Sum_probs=72.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCC--CcEEEEeCCHHHHHHHHHHHHh------cCCCceEEEEeccCCCcCC-CCccE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGF--SDLTGVDYSEDAINLAQSLANR------DGFSCIKFLVDDVLDTKLE-RQFQL 233 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~--~~v~gvD~s~~~l~~ar~~~~~------~g~~~i~~~~~D~~~~~~~-~~fD~ 233 (253)
.++.+|||||||+|.++..+++.+. .+|+|+|+|+.|++.|++++.. .++.+++++++|+.++++. ++||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 4778999999999999999999962 4999999999999999997653 3566899999999999876 89999
Q ss_pred EEEccccceec
Q 025428 234 VMDKGTLDAIG 244 (253)
Q Consensus 234 Vi~~~~l~~i~ 244 (253)
|++..++||+.
T Consensus 800 VV~~eVLeHL~ 810 (950)
T 3htx_A 800 GTCLEVIEHME 810 (950)
T ss_dssp EEEESCGGGSC
T ss_pred EEEeCchhhCC
Confidence 99999999984
No 104
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.31 E-value=2.7e-12 Score=109.48 Aligned_cols=76 Identities=16% Similarity=0.199 Sum_probs=66.6
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----CCCccEEEEcc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----ERQFQLVMDKG 238 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----~~~fD~Vi~~~ 238 (253)
++.+|||+|||+|.++..++.. ...+|+|+|+|+.|++.|+++++..++.+++++++|+.++++ .++||+|++..
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 5679999999999999999964 334899999999999999999999998889999999988764 47899999866
Q ss_pred c
Q 025428 239 T 239 (253)
Q Consensus 239 ~ 239 (253)
+
T Consensus 150 ~ 150 (240)
T 1xdz_A 150 V 150 (240)
T ss_dssp C
T ss_pred c
Confidence 3
No 105
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.31 E-value=3.9e-12 Score=109.88 Aligned_cols=81 Identities=20% Similarity=0.211 Sum_probs=70.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CC-CcEEEEeCCHH------HHHHHHHHHHhcCCC-ceEEEEec---cCCCcCC-C
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GF-SDLTGVDYSED------AINLAQSLANRDGFS-CIKFLVDD---VLDTKLE-R 229 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~-~~v~gvD~s~~------~l~~ar~~~~~~g~~-~i~~~~~D---~~~~~~~-~ 229 (253)
.++.+|||||||+|.++..+++. |. .+|+|+|+|+. |++.|++++...++. +++++++| ...++++ +
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 121 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQ 121 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCC
Confidence 57789999999999999999998 43 49999999997 999999999888874 79999998 3444444 7
Q ss_pred CccEEEEcccccee
Q 025428 230 QFQLVMDKGTLDAI 243 (253)
Q Consensus 230 ~fD~Vi~~~~l~~i 243 (253)
+||+|++..++||+
T Consensus 122 ~fD~v~~~~~l~~~ 135 (275)
T 3bkx_A 122 HFDRVVLAHSLWYF 135 (275)
T ss_dssp CCSEEEEESCGGGS
T ss_pred CEEEEEEccchhhC
Confidence 99999999999987
No 106
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.31 E-value=4.7e-12 Score=108.00 Aligned_cols=76 Identities=20% Similarity=0.228 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCC-CCccEEEEcc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLE-RQFQLVMDKG 238 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~-~~fD~Vi~~~ 238 (253)
.++.+|||||||+|.++..+++.+ ..+|+++|+++.+++.|++|++.+|+. +++++++|..+...+ .+||+|+..+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 567899999999999999999986 448999999999999999999999997 499999999764333 3799988644
No 107
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.31 E-value=5.8e-12 Score=111.53 Aligned_cols=80 Identities=16% Similarity=0.125 Sum_probs=66.9
Q ss_pred hccCCCCCEEEEEcCCCcHHH-HHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEc
Q 025428 159 NDKYLSSWSVLDIGTGNGLLL-QELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDK 237 (253)
Q Consensus 159 l~~~~~~~~VLDiGcGtG~~~-~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~ 237 (253)
+....++.+|||||||+|.++ ..+++....+|+|+|+|++|++.|+++++..|+.+++++++|+.+++ +++||+|++.
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~-d~~FDvV~~~ 195 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID-GLEFDVLMVA 195 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-GCCCSEEEEC
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-CCCcCEEEEC
Confidence 345578899999999999766 45565423499999999999999999999888878999999999875 6899999986
Q ss_pred cc
Q 025428 238 GT 239 (253)
Q Consensus 238 ~~ 239 (253)
..
T Consensus 196 a~ 197 (298)
T 3fpf_A 196 AL 197 (298)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 108
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.31 E-value=7.4e-12 Score=110.73 Aligned_cols=81 Identities=17% Similarity=0.163 Sum_probs=69.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc-------CCCceEEEEeccCCCc----C---C
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRD-------GFSCIKFLVDDVLDTK----L---E 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~-------g~~~i~~~~~D~~~~~----~---~ 228 (253)
.++.+|||+|||+|.++..+++.+..+++|+|+|+.|++.|+++.... +..+++++++|+.+++ + +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 366799999999999999999876669999999999999999988654 3347999999999875 3 2
Q ss_pred CCccEEEEcccccee
Q 025428 229 RQFQLVMDKGTLDAI 243 (253)
Q Consensus 229 ~~fD~Vi~~~~l~~i 243 (253)
++||+|++..++|++
T Consensus 113 ~~fD~V~~~~~l~~~ 127 (313)
T 3bgv_A 113 MCFDICSCQFVCHYS 127 (313)
T ss_dssp CCEEEEEEETCGGGG
T ss_pred CCEEEEEEecchhhc
Confidence 589999999999987
No 109
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.31 E-value=8.1e-12 Score=105.09 Aligned_cols=90 Identities=14% Similarity=0.214 Sum_probs=75.0
Q ss_pred hHHHHhc-cCCCCCEEEEEcCCCcHHHHHHHhcCC------CcEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEEec
Q 025428 154 EPVEEND-KYLSSWSVLDIGTGNGLLLQELSKQGF------SDLTGVDYSEDAINLAQSLANRDG-----FSCIKFLVDD 221 (253)
Q Consensus 154 ~l~~~l~-~~~~~~~VLDiGcGtG~~~~~la~~g~------~~v~gvD~s~~~l~~ar~~~~~~g-----~~~i~~~~~D 221 (253)
.+++.+. ...++.+|||||||+|.++..+++... .+|+++|+++.+++.|+++++..+ ..+++++++|
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN 148 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC
Confidence 4455554 345778999999999999999998732 389999999999999999998877 5689999999
Q ss_pred cCCCc----C-CCCccEEEEcccccee
Q 025428 222 VLDTK----L-ERQFQLVMDKGTLDAI 243 (253)
Q Consensus 222 ~~~~~----~-~~~fD~Vi~~~~l~~i 243 (253)
+.+.. . .++||+|++...++++
T Consensus 149 ~~~~~~~~~~~~~~fD~I~~~~~~~~~ 175 (227)
T 2pbf_A 149 IYQVNEEEKKELGLFDAIHVGASASEL 175 (227)
T ss_dssp GGGCCHHHHHHHCCEEEEEECSBBSSC
T ss_pred hHhcccccCccCCCcCEEEECCchHHH
Confidence 98864 3 3789999999988865
No 110
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.31 E-value=1.2e-11 Score=104.14 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=68.1
Q ss_pred CCCCEEEEEcCC-CcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc-C-CCCccEEEEccc
Q 025428 163 LSSWSVLDIGTG-NGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK-L-ERQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcG-tG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~-~-~~~fD~Vi~~~~ 239 (253)
.++.+|||+||| +|.++..+++.+..+|+|+|+|+.|++.|++++..+++ +++++++|+..+. + +++||+|+++..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhcccCceeEEEECCC
Confidence 577899999999 99999999998334999999999999999999999988 9999999975432 2 389999999977
Q ss_pred ccee
Q 025428 240 LDAI 243 (253)
Q Consensus 240 l~~i 243 (253)
+++.
T Consensus 133 ~~~~ 136 (230)
T 3evz_A 133 YYDK 136 (230)
T ss_dssp CC--
T ss_pred CcCC
Confidence 7654
No 111
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.31 E-value=8e-12 Score=103.43 Aligned_cols=75 Identities=20% Similarity=0.196 Sum_probs=67.3
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEcc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKG 238 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~ 238 (253)
++.+|||+|||+|.++..++.. +..+++|+|+|+.+++.+++++...++.+++++++|+.+.+..++||+|+++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~ 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRA 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEec
Confidence 4679999999999999999987 34599999999999999999999998878999999999886558899999865
No 112
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.30 E-value=1e-11 Score=106.40 Aligned_cols=80 Identities=18% Similarity=0.141 Sum_probs=66.6
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCC---cCC----CCccEE
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDT---KLE----RQFQLV 234 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~---~~~----~~fD~V 234 (253)
++.+|||+|||+|.++..++.+ +..+|+|+|+|+.|++.|+++++.+++.+ ++++++|+.+. +++ ++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 4679999999999999999876 23499999999999999999999988875 99999997662 233 589999
Q ss_pred EEcccccee
Q 025428 235 MDKGTLDAI 243 (253)
Q Consensus 235 i~~~~l~~i 243 (253)
+++..+++.
T Consensus 145 ~~npp~~~~ 153 (254)
T 2h00_A 145 MCNPPFFAN 153 (254)
T ss_dssp EECCCCC--
T ss_pred EECCCCccC
Confidence 999877754
No 113
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.30 E-value=5.3e-12 Score=104.81 Aligned_cols=72 Identities=22% Similarity=0.324 Sum_probs=64.8
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccce
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLDA 242 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~~ 242 (253)
++.+|||+|||+|.++..+ +..+++|+|+|+.|++.++++. .+++++++|+.+++++ ++||+|++..++||
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 107 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPFPGESFDVVLLFTTLEF 107 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCSCSSCEEEEEEESCTTT
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCCCCCcEEEEEEcChhhh
Confidence 6679999999999999888 4558999999999999999886 4789999999998875 79999999999998
Q ss_pred e
Q 025428 243 I 243 (253)
Q Consensus 243 i 243 (253)
+
T Consensus 108 ~ 108 (211)
T 2gs9_A 108 V 108 (211)
T ss_dssp C
T ss_pred c
Confidence 7
No 114
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.30 E-value=6.8e-12 Score=118.19 Aligned_cols=80 Identities=20% Similarity=0.297 Sum_probs=71.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
.++.+|||||||+|.++..+++.|..+|+|+|+|+ |++.|+++++.+++. +++++++|+.+++++++||+|+++.+++
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 235 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCHH
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCchH
Confidence 46789999999999999999998777999999999 999999999999984 7999999999987778999999988766
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
++
T Consensus 236 ~~ 237 (480)
T 3b3j_A 236 ML 237 (480)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 115
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.30 E-value=9.2e-12 Score=100.87 Aligned_cols=90 Identities=14% Similarity=0.206 Sum_probs=73.6
Q ss_pred ccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEeccCCCcCC-
Q 025428 151 LKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVDDVLDTKLE- 228 (253)
Q Consensus 151 ~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~D~~~~~~~- 228 (253)
+...+++.+. ..++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.+++++...++ .+++++++|+.+....
T Consensus 21 ~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 98 (192)
T 1l3i_A 21 VRCLIMCLAE-PGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI 98 (192)
T ss_dssp HHHHHHHHHC-CCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS
T ss_pred HHHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC
Confidence 3334444443 3577899999999999999999997 6999999999999999999998888 5899999998772222
Q ss_pred CCccEEEEccccce
Q 025428 229 RQFQLVMDKGTLDA 242 (253)
Q Consensus 229 ~~fD~Vi~~~~l~~ 242 (253)
++||+|++..++++
T Consensus 99 ~~~D~v~~~~~~~~ 112 (192)
T 1l3i_A 99 PDIDIAVVGGSGGE 112 (192)
T ss_dssp CCEEEEEESCCTTC
T ss_pred CCCCEEEECCchHH
Confidence 68999999887654
No 116
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.29 E-value=7.8e-12 Score=108.88 Aligned_cols=79 Identities=25% Similarity=0.357 Sum_probs=68.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
.++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|+++++.+++.+++++++|+.+...+++||+|+++..++
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCB
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCC
Confidence 45679999999999999999976 44599999999999999999999988878999999998754357899999985543
No 117
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.29 E-value=5.6e-12 Score=106.67 Aligned_cols=75 Identities=19% Similarity=0.345 Sum_probs=66.2
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC-c--C-CCCccEEEEcc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT-K--L-ERQFQLVMDKG 238 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~-~--~-~~~fD~Vi~~~ 238 (253)
.+.+|||||||+|.++..+++.. ...|+|+|+|+.|++.|++++...++.|++++++|+.++ + + +++||.|+++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 56799999999999999999873 337999999999999999999999998999999999885 2 3 48999999863
No 118
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.28 E-value=1.5e-11 Score=104.35 Aligned_cols=89 Identities=15% Similarity=0.228 Sum_probs=72.7
Q ss_pred hHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-CCCcc
Q 025428 154 EPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-ERQFQ 232 (253)
Q Consensus 154 ~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-~~~fD 232 (253)
.+++.+ ...++.+|||+|||+|.++..+++.+..+|+++|+++.+++.|++++...++.+++++++|+..... ..+||
T Consensus 82 ~~~~~l-~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 160 (235)
T 1jg1_A 82 IMLEIA-NLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYD 160 (235)
T ss_dssp HHHHHH-TCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEE
T ss_pred HHHHhc-CCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCcc
Confidence 344444 3357789999999999999999998425999999999999999999999998889999999832212 25699
Q ss_pred EEEEcccccee
Q 025428 233 LVMDKGTLDAI 243 (253)
Q Consensus 233 ~Vi~~~~l~~i 243 (253)
+|++..+++++
T Consensus 161 ~Ii~~~~~~~~ 171 (235)
T 1jg1_A 161 VIIVTAGAPKI 171 (235)
T ss_dssp EEEECSBBSSC
T ss_pred EEEECCcHHHH
Confidence 99999988876
No 119
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.28 E-value=2.3e-11 Score=98.69 Aligned_cols=75 Identities=25% Similarity=0.390 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEc-ccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDK-GTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~-~~l 240 (253)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++. .+++++++|+.+++++ ++||+|++. .++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~ 118 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQISETDFDLIVSAGNVM 118 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCCCCCCEEEEEECCCCG
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCCCCCceeEEEECCcHH
Confidence 4678999999999999999999965 9999999999999999875 3689999999998765 789999998 677
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
+++
T Consensus 119 ~~~ 121 (195)
T 3cgg_A 119 GFL 121 (195)
T ss_dssp GGS
T ss_pred hhc
Confidence 775
No 120
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.28 E-value=9.8e-12 Score=104.75 Aligned_cols=75 Identities=25% Similarity=0.355 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEE-ccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMD-KGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~-~~~l~ 241 (253)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.|++.++++. .+++++++|+.+++++++||+|++ ..+++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 112 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRLGRKFSAVVSMFSSVG 112 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCCSSCEEEEEECTTGGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHcccCCCCcEEEEcCchHh
Confidence 3668999999999999999999965 9999999999999999874 368999999999877789999995 55888
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 113 ~~ 114 (239)
T 3bxo_A 113 YL 114 (239)
T ss_dssp GC
T ss_pred hc
Confidence 87
No 121
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.28 E-value=1.8e-11 Score=109.68 Aligned_cols=80 Identities=29% Similarity=0.441 Sum_probs=70.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCC-CCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLE-RQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~-~~fD~Vi~~~~l 240 (253)
.++.+|||||||+|.++..+++.|..+|+|+|+| .|++.|+++++.+++. +++++++|+.+++++ ++||+|++..+.
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 3678999999999999999999987799999999 5999999999998886 599999999998876 899999998655
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
+++
T Consensus 116 ~~l 118 (328)
T 1g6q_1 116 YFL 118 (328)
T ss_dssp TTB
T ss_pred hhc
Confidence 544
No 122
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.28 E-value=9.7e-12 Score=105.68 Aligned_cols=79 Identities=14% Similarity=0.246 Sum_probs=68.1
Q ss_pred cCCCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcC---CCCccEEE
Q 025428 161 KYLSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKL---ERQFQLVM 235 (253)
Q Consensus 161 ~~~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~---~~~fD~Vi 235 (253)
...++.+|||||||+|..+..++... ..+|+++|+++.+++.|+++++..++. +++++++|+.+... +++||+|+
T Consensus 68 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~ 147 (232)
T 3ntv_A 68 RMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIF 147 (232)
T ss_dssp HHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEE
T ss_pred hhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEE
Confidence 33467899999999999999999852 459999999999999999999999986 79999999988643 58999999
Q ss_pred Eccc
Q 025428 236 DKGT 239 (253)
Q Consensus 236 ~~~~ 239 (253)
+...
T Consensus 148 ~~~~ 151 (232)
T 3ntv_A 148 IDAA 151 (232)
T ss_dssp EETT
T ss_pred EcCc
Confidence 7653
No 123
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.27 E-value=1.3e-11 Score=112.80 Aligned_cols=81 Identities=22% Similarity=0.332 Sum_probs=70.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc--CCCcEEEEeCCHHHHHHHHHHHHhc-----C-C--CceEEEEeccCCC------c
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ--GFSDLTGVDYSEDAINLAQSLANRD-----G-F--SCIKFLVDDVLDT------K 226 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~--g~~~v~gvD~s~~~l~~ar~~~~~~-----g-~--~~i~~~~~D~~~~------~ 226 (253)
.++.+|||||||+|.++..+++. ...+|+|+|+|+.|++.|+++++.. | + .+++++++|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46789999999999999999986 2349999999999999999988654 3 2 4899999999987 6
Q ss_pred CC-CCccEEEEcccccee
Q 025428 227 LE-RQFQLVMDKGTLDAI 243 (253)
Q Consensus 227 ~~-~~fD~Vi~~~~l~~i 243 (253)
++ ++||+|+++.+++++
T Consensus 162 ~~~~~fD~V~~~~~l~~~ 179 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLS 179 (383)
T ss_dssp CCTTCEEEEEEESCGGGC
T ss_pred CCCCCEEEEEEccchhcC
Confidence 65 799999999999987
No 124
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.27 E-value=1e-11 Score=113.19 Aligned_cols=89 Identities=21% Similarity=0.247 Sum_probs=75.6
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCC-CcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEeccCCCcCC-
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGF-SDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVDDVLDTKLE- 228 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~-~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~D~~~~~~~- 228 (253)
...++.+. ..++.+|||+|||+|.++..++..+. .+|+|+|+|+.|++.|+++++.+|+ .+++++++|+.+++++
T Consensus 207 a~~l~~~~--~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~ 284 (373)
T 3tm4_A 207 ANAMIELA--ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYV 284 (373)
T ss_dssp HHHHHHHH--TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTC
T ss_pred HHHHHHhh--cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCccc
Confidence 34444444 46788999999999999999999854 3899999999999999999999998 4799999999998875
Q ss_pred CCccEEEEccccce
Q 025428 229 RQFQLVMDKGTLDA 242 (253)
Q Consensus 229 ~~fD~Vi~~~~l~~ 242 (253)
++||+|+++..++.
T Consensus 285 ~~fD~Ii~npPyg~ 298 (373)
T 3tm4_A 285 DSVDFAISNLPYGL 298 (373)
T ss_dssp SCEEEEEEECCCC-
T ss_pred CCcCEEEECCCCCc
Confidence 88999999877654
No 125
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.27 E-value=6.2e-12 Score=100.92 Aligned_cols=72 Identities=17% Similarity=0.255 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~ 241 (253)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++ ..+++++++| .+++ ++||+|++..+++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~~~~~~~D~v~~~~~l~ 86 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK-----FDSVITLSDP---KEIPDNSVDFILFANSFH 86 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH-----CTTSEEESSG---GGSCTTCEEEEEEESCST
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CCCCCCceEEEEEccchh
Confidence 4677999999999999999999975 999999999999999988 3579999999 4444 7899999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
|+
T Consensus 87 ~~ 88 (170)
T 3i9f_A 87 DM 88 (170)
T ss_dssp TC
T ss_pred cc
Confidence 87
No 126
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.27 E-value=6.9e-12 Score=105.54 Aligned_cols=90 Identities=17% Similarity=0.178 Sum_probs=71.9
Q ss_pred hHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCc--CC
Q 025428 154 EPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTK--LE 228 (253)
Q Consensus 154 ~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~--~~ 228 (253)
.++..+....++.+|||||||+|..+..+++. + ..+|+++|+++.|++.|+++++..++. +++++++|+.+.. +.
T Consensus 48 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~ 127 (221)
T 3u81_A 48 QIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLK 127 (221)
T ss_dssp HHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTT
T ss_pred HHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHH
Confidence 34444444456789999999999999999985 1 349999999999999999999999886 5999999986532 22
Q ss_pred -----CCccEEEEcccccee
Q 025428 229 -----RQFQLVMDKGTLDAI 243 (253)
Q Consensus 229 -----~~fD~Vi~~~~l~~i 243 (253)
++||+|++....++.
T Consensus 128 ~~~~~~~fD~V~~d~~~~~~ 147 (221)
T 3u81_A 128 KKYDVDTLDMVFLDHWKDRY 147 (221)
T ss_dssp TTSCCCCCSEEEECSCGGGH
T ss_pred HhcCCCceEEEEEcCCcccc
Confidence 689999998866554
No 127
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.27 E-value=6.8e-12 Score=101.75 Aligned_cols=70 Identities=20% Similarity=0.245 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccce
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLDA 242 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~~ 242 (253)
.++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. ..+++++++|+.+...+++||+|+++..+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES---------HRGGNLVRADLLCSINQESVDVVVFNPPYVP 90 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT---------CSSSCEEECSTTTTBCGGGCSEEEECCCCBT
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc---------ccCCeEEECChhhhcccCCCCEEEECCCCcc
Confidence 356799999999999999999996 99999999999997 2478999999988433489999999988876
Q ss_pred e
Q 025428 243 I 243 (253)
Q Consensus 243 i 243 (253)
.
T Consensus 91 ~ 91 (170)
T 3q87_B 91 D 91 (170)
T ss_dssp T
T ss_pred C
Confidence 4
No 128
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.27 E-value=1.7e-11 Score=107.89 Aligned_cols=77 Identities=19% Similarity=0.263 Sum_probs=67.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.+++++...+. .+++++++|+.+.+++ +||+|+++..++
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~-~fD~vv~nlpy~ 104 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP-FFDTCVANLPYQ 104 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC-CCSEEEEECCGG
T ss_pred CCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch-hhcEEEEecCcc
Confidence 4678999999999999999999965 999999999999999999877665 4799999999987665 799999975443
No 129
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.26 E-value=1.1e-11 Score=108.93 Aligned_cols=77 Identities=12% Similarity=-0.003 Sum_probs=70.8
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcCCCCccEEEEcc
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKLERQFQLVMDKG 238 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~~~fD~Vi~~~ 238 (253)
..++.+|||+|||+|.+++.++++|..+|+++|+|+.+++.+++|++.+++.+ ++++++|+.++...+.||.|+++.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~ 200 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGY 200 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECC
Confidence 35789999999999999999999987799999999999999999999999975 999999999987778999999864
No 130
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.26 E-value=1.3e-11 Score=109.43 Aligned_cols=77 Identities=21% Similarity=0.277 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
.++.+|||+|||+|.++..+++.+. +|+|+|+++.|++.+++++...++.+++++++|+.+++++ +||+|+++..++
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~-~~D~Vv~n~py~ 117 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP-KFDVCTANIPYK 117 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC-CCSEEEEECCGG
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc-cCCEEEEcCCcc
Confidence 4678999999999999999999854 9999999999999999999887877899999999987654 899999976654
No 131
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.26 E-value=1.9e-11 Score=113.54 Aligned_cols=104 Identities=17% Similarity=0.214 Sum_probs=79.2
Q ss_pred hcceeecCCCcCCccccccchHHHHhc---cCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc
Q 025428 134 SLCISISQGHMLNHVEDLKSEPVEEND---KYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRD 210 (253)
Q Consensus 134 ~~~~~i~~~~~~~~~~~~~~~l~~~l~---~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~ 210 (253)
++.+.+.++.+..........+++.+. ...++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|+++++.+
T Consensus 253 g~~~~~~~~~f~q~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~ 331 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLN 331 (433)
T ss_dssp TEEEECCSSSCCCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHT
T ss_pred CEEEEECcccccccCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHc
Confidence 344556665555443333444443332 2246679999999999999999998 459999999999999999999999
Q ss_pred CCCceEEEEeccCCC----cCC-CCccEEEEcc
Q 025428 211 GFSCIKFLVDDVLDT----KLE-RQFQLVMDKG 238 (253)
Q Consensus 211 g~~~i~~~~~D~~~~----~~~-~~fD~Vi~~~ 238 (253)
++.|++|+++|+.+. ++. ++||+|+++.
T Consensus 332 ~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dP 364 (433)
T 1uwv_A 332 GLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDP 364 (433)
T ss_dssp TCCSEEEEECCTTSCCSSSGGGTTCCSEEEECC
T ss_pred CCCceEEEECCHHHHhhhhhhhcCCCCEEEECC
Confidence 998999999999883 222 6899999864
No 132
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.26 E-value=1.8e-11 Score=106.06 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=69.0
Q ss_pred cCCCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHh---cCCC-ceEEEEeccCCCc-------C-
Q 025428 161 KYLSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANR---DGFS-CIKFLVDDVLDTK-------L- 227 (253)
Q Consensus 161 ~~~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~---~g~~-~i~~~~~D~~~~~-------~- 227 (253)
...++.+|||+|||+|.++..++.+. ..+|+|+|+++.+++.|++++.. +++. +++++++|+.+.. +
T Consensus 33 ~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 112 (260)
T 2ozv_A 33 ADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLP 112 (260)
T ss_dssp CCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCC
T ss_pred cccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccC
Confidence 33567799999999999999999984 34999999999999999999988 8886 5999999999872 3
Q ss_pred CCCccEEEEccccce
Q 025428 228 ERQFQLVMDKGTLDA 242 (253)
Q Consensus 228 ~~~fD~Vi~~~~l~~ 242 (253)
+++||+|+++..+..
T Consensus 113 ~~~fD~Vv~nPPy~~ 127 (260)
T 2ozv_A 113 DEHFHHVIMNPPYND 127 (260)
T ss_dssp TTCEEEEEECCCC--
T ss_pred CCCcCEEEECCCCcC
Confidence 478999999866554
No 133
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.25 E-value=2e-11 Score=107.41 Aligned_cols=76 Identities=24% Similarity=0.353 Sum_probs=66.3
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcCCCCc---cEEEEccc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKLERQF---QLVMDKGT 239 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~~~f---D~Vi~~~~ 239 (253)
++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.|+++++.+++.+ ++|+++|+.+. ++++| |+|+++..
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FKEKFASIEMILSNPP 201 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GGGGTTTCCEEEECCC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cccccCCCCEEEEcCC
Confidence 567999999999999999998833499999999999999999999999875 99999999874 34578 99999844
Q ss_pred c
Q 025428 240 L 240 (253)
Q Consensus 240 l 240 (253)
+
T Consensus 202 y 202 (284)
T 1nv8_A 202 Y 202 (284)
T ss_dssp C
T ss_pred C
Confidence 3
No 134
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.25 E-value=1.3e-11 Score=104.10 Aligned_cols=90 Identities=12% Similarity=0.154 Sum_probs=73.4
Q ss_pred hHHHHhc-cCCCCCEEEEEcCCCcHHHHHHHhc-CC------CcEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEEe
Q 025428 154 EPVEEND-KYLSSWSVLDIGTGNGLLLQELSKQ-GF------SDLTGVDYSEDAINLAQSLANRDG-----FSCIKFLVD 220 (253)
Q Consensus 154 ~l~~~l~-~~~~~~~VLDiGcGtG~~~~~la~~-g~------~~v~gvD~s~~~l~~ar~~~~~~g-----~~~i~~~~~ 220 (253)
.+++.+. ...++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.|++++...+ ..+++++++
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 152 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG 152 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC
Confidence 3444443 2356789999999999999999985 42 489999999999999999988766 568999999
Q ss_pred ccCCCcCC-CCccEEEEcccccee
Q 025428 221 DVLDTKLE-RQFQLVMDKGTLDAI 243 (253)
Q Consensus 221 D~~~~~~~-~~fD~Vi~~~~l~~i 243 (253)
|+.+.... ++||+|++...++++
T Consensus 153 d~~~~~~~~~~fD~I~~~~~~~~~ 176 (227)
T 1r18_A 153 DGRKGYPPNAPYNAIHVGAAAPDT 176 (227)
T ss_dssp CGGGCCGGGCSEEEEEECSCBSSC
T ss_pred CcccCCCcCCCccEEEECCchHHH
Confidence 99874333 789999999988876
No 135
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.24 E-value=1.7e-12 Score=107.33 Aligned_cols=79 Identities=25% Similarity=0.354 Sum_probs=50.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCC-CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-----CCccEEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGF-SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-----RQFQLVMD 236 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~-~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-----~~fD~Vi~ 236 (253)
.++.+|||+|||+|.++..+++.+. .+++|+|+|+.|++.|++++..+++ +++++++|+.+.... ++||+|++
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 4678999999999999999999842 3999999999999999999988887 899999999884333 89999999
Q ss_pred ccccce
Q 025428 237 KGTLDA 242 (253)
Q Consensus 237 ~~~l~~ 242 (253)
+..++.
T Consensus 108 npp~~~ 113 (215)
T 4dzr_A 108 NPPYIP 113 (215)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 866543
No 136
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.24 E-value=3.5e-11 Score=111.69 Aligned_cols=103 Identities=18% Similarity=0.228 Sum_probs=81.0
Q ss_pred hcceeecCCCcCCccccccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC
Q 025428 134 SLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS 213 (253)
Q Consensus 134 ~~~~~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~ 213 (253)
++.+.+.++.+..........+.+.+....++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++++.+++.
T Consensus 260 g~~f~~~~~~F~q~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl~ 338 (425)
T 2jjq_A 260 DVDYLIHPNSFFQTNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNVD 338 (425)
T ss_dssp TEEEEECTTSCCCSBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred CEEEEEccccccccCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCc
Confidence 34555666655554444444555444334567899999999999999999985 49999999999999999999999987
Q ss_pred ceEEEEeccCCCcCCCCccEEEEccc
Q 025428 214 CIKFLVDDVLDTKLERQFQLVMDKGT 239 (253)
Q Consensus 214 ~i~~~~~D~~~~~~~~~fD~Vi~~~~ 239 (253)
++|+++|+.++.. .+||+|+++..
T Consensus 339 -v~~~~~d~~~~~~-~~fD~Vv~dPP 362 (425)
T 2jjq_A 339 -AEFEVASDREVSV-KGFDTVIVDPP 362 (425)
T ss_dssp -EEEEECCTTTCCC-TTCSEEEECCC
T ss_pred -EEEEECChHHcCc-cCCCEEEEcCC
Confidence 9999999998753 38999998654
No 137
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.24 E-value=3.5e-11 Score=101.07 Aligned_cols=90 Identities=16% Similarity=0.243 Sum_probs=73.2
Q ss_pred hHHHHhc-cCCCCCEEEEEcCCCcHHHHHHHhc-CC-CcEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEEeccCCC
Q 025428 154 EPVEEND-KYLSSWSVLDIGTGNGLLLQELSKQ-GF-SDLTGVDYSEDAINLAQSLANRDG-----FSCIKFLVDDVLDT 225 (253)
Q Consensus 154 ~l~~~l~-~~~~~~~VLDiGcGtG~~~~~la~~-g~-~~v~gvD~s~~~l~~ar~~~~~~g-----~~~i~~~~~D~~~~ 225 (253)
.+++.+. ...++.+|||+|||+|.++..+++. |. .+|+++|+++.+++.+++++...+ ..+++++++|+...
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 3444443 2357789999999999999999987 43 399999999999999999988765 35799999999876
Q ss_pred cC-CCCccEEEEcccccee
Q 025428 226 KL-ERQFQLVMDKGTLDAI 243 (253)
Q Consensus 226 ~~-~~~fD~Vi~~~~l~~i 243 (253)
.. .++||+|++...++++
T Consensus 146 ~~~~~~fD~i~~~~~~~~~ 164 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVV 164 (226)
T ss_dssp CGGGCCEEEEEECSBBSSC
T ss_pred cccCCCcCEEEECCchHHH
Confidence 54 3789999999888765
No 138
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.24 E-value=2.5e-11 Score=103.87 Aligned_cols=75 Identities=23% Similarity=0.240 Sum_probs=63.4
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHh------cCCCceEEEEeccCC-Cc--C-CCCcc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANR------DGFSCIKFLVDDVLD-TK--L-ERQFQ 232 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~------~g~~~i~~~~~D~~~-~~--~-~~~fD 232 (253)
++.+|||||||+|.++..+++. +...|+|+|+|+.|++.|+++++. .++.|++++++|+.+ ++ + +++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 5568999999999999999987 334899999999999999988754 466789999999987 44 4 48999
Q ss_pred EEEEcc
Q 025428 233 LVMDKG 238 (253)
Q Consensus 233 ~Vi~~~ 238 (253)
.|+++.
T Consensus 126 ~v~~~~ 131 (235)
T 3ckk_A 126 KMFFLF 131 (235)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 998754
No 139
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.24 E-value=9.7e-12 Score=104.33 Aligned_cols=91 Identities=15% Similarity=0.158 Sum_probs=72.9
Q ss_pred cccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCc
Q 025428 150 DLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTK 226 (253)
Q Consensus 150 ~~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~ 226 (253)
.....++..+....++.+|||||||+|..+..+++. + ..+|+++|+++.+++.|+++++..++.+ ++++++|+.+..
T Consensus 44 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 123 (223)
T 3duw_A 44 PTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSL 123 (223)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 334455555544457789999999999999999988 2 3499999999999999999999988875 999999997642
Q ss_pred C------CCCccEEEEcccc
Q 025428 227 L------ERQFQLVMDKGTL 240 (253)
Q Consensus 227 ~------~~~fD~Vi~~~~l 240 (253)
. .++||+|++....
T Consensus 124 ~~~~~~~~~~fD~v~~d~~~ 143 (223)
T 3duw_A 124 QQIENEKYEPFDFIFIDADK 143 (223)
T ss_dssp HHHHHTTCCCCSEEEECSCG
T ss_pred HHHHhcCCCCcCEEEEcCCc
Confidence 2 1579999987653
No 140
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.23 E-value=9.9e-12 Score=106.12 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc--CC-CCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK--LE-RQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~--~~-~~fD~Vi~~~~ 239 (253)
.++.+|||||||+|..+..+++++..+++|||+|+.|++.|+++....+. ++.++.+|+.+.. ++ ++||.|+...+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHhhcccccccCCceEEEeee
Confidence 47889999999999999999988556899999999999999999887764 7899999987653 33 78999986543
No 141
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.23 E-value=4.4e-11 Score=100.94 Aligned_cols=69 Identities=17% Similarity=0.217 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccC-CCcC--CCCccEEEEc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVL-DTKL--ERQFQLVMDK 237 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~-~~~~--~~~fD~Vi~~ 237 (253)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.++++ ..+++++++|+. .+++ +++||+|+++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPAGLGAPFGLIVSR 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCTTCCCCEEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCCcCCCCEEEEEeC
Confidence 4678999999999999999999965 999999999999999988 247999999994 4554 4789999986
No 142
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.23 E-value=2.8e-11 Score=109.19 Aligned_cols=82 Identities=23% Similarity=0.208 Sum_probs=71.8
Q ss_pred cCCCCCEEEEEcCCCcHHHHHHHhcC--CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEc
Q 025428 161 KYLSSWSVLDIGTGNGLLLQELSKQG--FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDK 237 (253)
Q Consensus 161 ~~~~~~~VLDiGcGtG~~~~~la~~g--~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~ 237 (253)
...++.+|||+|||+|.++..++..+ ..+++|+|+|+.|++.|++|++..|+.+++++++|+.+++.+ +.||+|+++
T Consensus 200 ~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~n 279 (354)
T 3tma_A 200 DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILAN 279 (354)
T ss_dssp TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEEC
T ss_pred CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEEC
Confidence 33577899999999999999999974 249999999999999999999999988899999999998765 679999998
Q ss_pred cccce
Q 025428 238 GTLDA 242 (253)
Q Consensus 238 ~~l~~ 242 (253)
..+..
T Consensus 280 pPyg~ 284 (354)
T 3tma_A 280 PPHGL 284 (354)
T ss_dssp CCSCC
T ss_pred CCCcC
Confidence 76543
No 143
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.22 E-value=2.5e-11 Score=107.53 Aligned_cols=86 Identities=23% Similarity=0.348 Sum_probs=71.0
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CC
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQ 230 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~ 230 (253)
...+++.+.. .++.+|||||||+|.++..+++.+ .+|+|+|+++.|++.+++++. +..+++++++|+.+++++ .+
T Consensus 39 ~~~Iv~~l~~-~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 39 VNKAVESANL-TKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSCGGGSC
T ss_pred HHHHHHhcCC-CCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCCcccCC
Confidence 3344444432 467899999999999999999995 499999999999999999987 335899999999998776 57
Q ss_pred ccEEEEccccc
Q 025428 231 FQLVMDKGTLD 241 (253)
Q Consensus 231 fD~Vi~~~~l~ 241 (253)
||+|+++..++
T Consensus 115 fD~Iv~NlPy~ 125 (295)
T 3gru_A 115 FNKVVANLPYQ 125 (295)
T ss_dssp CSEEEEECCGG
T ss_pred ccEEEEeCccc
Confidence 99999987654
No 144
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.22 E-value=5.5e-12 Score=107.92 Aligned_cols=82 Identities=18% Similarity=0.230 Sum_probs=68.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC-----------------------------C
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF-----------------------------S 213 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~-----------------------------~ 213 (253)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.+++++...+. .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 45679999999999999999988666899999999999999998765431 0
Q ss_pred ce-EEEEeccCCCcC--C---CCccEEEEccccceec
Q 025428 214 CI-KFLVDDVLDTKL--E---RQFQLVMDKGTLDAIG 244 (253)
Q Consensus 214 ~i-~~~~~D~~~~~~--~---~~fD~Vi~~~~l~~i~ 244 (253)
++ .++++|+.+..+ + ++||+|++..+||++.
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~ 171 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAAC 171 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhc
Confidence 27 999999988643 3 6899999999999663
No 145
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.22 E-value=1.3e-11 Score=103.49 Aligned_cols=88 Identities=23% Similarity=0.232 Sum_probs=71.0
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCc--
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTK-- 226 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~-- 226 (253)
...++..+....++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.|+++++..++.+ ++++++|+.+..
T Consensus 52 ~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 131 (225)
T 3tr6_A 52 QAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAE 131 (225)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHH
Confidence 3344444444456789999999999999999987 2 4599999999999999999999998874 999999996652
Q ss_pred CC-----CCccEEEEccc
Q 025428 227 LE-----RQFQLVMDKGT 239 (253)
Q Consensus 227 ~~-----~~fD~Vi~~~~ 239 (253)
.. ++||+|++...
T Consensus 132 ~~~~~~~~~fD~v~~~~~ 149 (225)
T 3tr6_A 132 LIHAGQAWQYDLIYIDAD 149 (225)
T ss_dssp HHTTTCTTCEEEEEECSC
T ss_pred hhhccCCCCccEEEECCC
Confidence 11 78999997654
No 146
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.21 E-value=5.7e-11 Score=102.08 Aligned_cols=78 Identities=21% Similarity=0.210 Sum_probs=71.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccce
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLDA 242 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~~ 242 (253)
....+|||||||+|.++..+. +..+++|+||++.|++.+++++..+|. +..+.++|....+++++||+|++.-++|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~-~~~~~v~D~~~~~~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW-DFTFALQDVLCAPPAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC-EEEEEECCTTTSCCCCBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeecccCCCCCCcchHHHHHHHHH
Confidence 467799999999999999988 456999999999999999999988884 88999999999988899999999988888
Q ss_pred e
Q 025428 243 I 243 (253)
Q Consensus 243 i 243 (253)
+
T Consensus 181 L 181 (253)
T 3frh_A 181 L 181 (253)
T ss_dssp H
T ss_pred h
Confidence 7
No 147
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.21 E-value=4.7e-11 Score=102.20 Aligned_cols=75 Identities=21% Similarity=0.235 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCC-CcEEEEeCCHHHHHHHHHHHHhc--------CCCceEEEEeccCC-Cc--CC-C
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGF-SDLTGVDYSEDAINLAQSLANRD--------GFSCIKFLVDDVLD-TK--LE-R 229 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~-~~v~gvD~s~~~l~~ar~~~~~~--------g~~~i~~~~~D~~~-~~--~~-~ 229 (253)
.++.+|||||||+|.++..++..+. .+|+|+|+|+.|++.++++++.+ ++.|++++++|+.+ ++ ++ +
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 3567999999999999999999854 38999999999999999998776 77799999999987 44 33 7
Q ss_pred CccEEEEc
Q 025428 230 QFQLVMDK 237 (253)
Q Consensus 230 ~fD~Vi~~ 237 (253)
++|.|+.+
T Consensus 128 ~~d~v~~~ 135 (246)
T 2vdv_E 128 QLSKMFFC 135 (246)
T ss_dssp CEEEEEEE
T ss_pred ccCEEEEE
Confidence 88988853
No 148
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.21 E-value=5e-11 Score=100.92 Aligned_cols=72 Identities=8% Similarity=0.155 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCC----CcCCCCccEEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLD----TKLERQFQLVMD 236 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~----~~~~~~fD~Vi~ 236 (253)
.++.+|||+|||+|.++..+++. |..+|+|+|+|+.|++.++++++.+ .++.++++|+.+ .++.++||+|+.
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYANIVEKVDVIYE 149 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTTTSCCEEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccccCccEEEEEE
Confidence 46789999999999999999988 5459999999999999999997655 589999999988 555578999993
No 149
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.21 E-value=2.4e-11 Score=111.95 Aligned_cols=80 Identities=13% Similarity=0.169 Sum_probs=66.9
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHH-------HhcCC--CceEEEEeccCCCcCC---
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLA-------NRDGF--SCIKFLVDDVLDTKLE--- 228 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~-------~~~g~--~~i~~~~~D~~~~~~~--- 228 (253)
..++.+|||||||+|.+++.++.. |+.+|+|||+|+.|++.|++++ +..|+ .+|+|+++|+.++++.
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~ 250 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERI 250 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccccc
Confidence 367889999999999999999975 6656999999999999998864 33465 4799999999998764
Q ss_pred CCccEEEEccccc
Q 025428 229 RQFQLVMDKGTLD 241 (253)
Q Consensus 229 ~~fD~Vi~~~~l~ 241 (253)
..||+|+++.+++
T Consensus 251 ~~aDVVf~Nn~~F 263 (438)
T 3uwp_A 251 ANTSVIFVNNFAF 263 (438)
T ss_dssp HTCSEEEECCTTC
T ss_pred CCccEEEEccccc
Confidence 4799999987753
No 150
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.21 E-value=5.5e-11 Score=99.92 Aligned_cols=73 Identities=18% Similarity=0.211 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC----cCCCCccEEEEc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT----KLERQFQLVMDK 237 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~----~~~~~fD~Vi~~ 237 (253)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.+.++++.. .|+.++++|+... ++.++||+|+++
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 133 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIVEKVDLIYQD 133 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccccceeEEEEe
Confidence 46789999999999999999987 3348999999999988777766543 4789999999874 345899999987
No 151
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.21 E-value=1.9e-11 Score=105.03 Aligned_cols=89 Identities=13% Similarity=0.148 Sum_probs=72.2
Q ss_pred ccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCC-c
Q 025428 151 LKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDT-K 226 (253)
Q Consensus 151 ~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~-~ 226 (253)
....++..+....++.+|||||||+|..+..+++. + ..+|+++|+|+.+++.|+++++..|+. +++++++|+.+. +
T Consensus 50 ~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~ 129 (248)
T 3tfw_A 50 NQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLE 129 (248)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 34445555544457789999999999999999987 2 459999999999999999999999987 699999999763 2
Q ss_pred -C--CCCccEEEEccc
Q 025428 227 -L--ERQFQLVMDKGT 239 (253)
Q Consensus 227 -~--~~~fD~Vi~~~~ 239 (253)
. .++||+|++...
T Consensus 130 ~~~~~~~fD~V~~d~~ 145 (248)
T 3tfw_A 130 SLGECPAFDLIFIDAD 145 (248)
T ss_dssp TCCSCCCCSEEEECSC
T ss_pred hcCCCCCeEEEEECCc
Confidence 1 248999997654
No 152
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.21 E-value=5.8e-11 Score=101.53 Aligned_cols=77 Identities=19% Similarity=0.217 Sum_probs=67.8
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcCCCCccEEEEcc
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKLERQFQLVMDKG 238 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~~~fD~Vi~~~ 238 (253)
..++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.|+++++..++.+ ++++++|+.+...+++||+|+++.
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~ 170 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILDL 170 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEECS
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEECC
Confidence 357889999999999999999998 4 4599999999999999999999988876 999999999764457899999853
No 153
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.21 E-value=1.9e-11 Score=109.99 Aligned_cols=84 Identities=17% Similarity=0.214 Sum_probs=70.2
Q ss_pred HHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCc--eEEEEeccCCCcC-----
Q 025428 155 PVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSC--IKFLVDDVLDTKL----- 227 (253)
Q Consensus 155 l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~--i~~~~~D~~~~~~----- 227 (253)
+.+.+....++.+|||+|||+|.++..++..|. +|+++|+|+.|++.|++|++.+++.+ ++++++|+.++..
T Consensus 144 l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~ 222 (332)
T 2igt_A 144 LKNAVETADRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERR 222 (332)
T ss_dssp HHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhc
Confidence 344443223567999999999999999999987 99999999999999999999999874 9999999987642
Q ss_pred CCCccEEEEccc
Q 025428 228 ERQFQLVMDKGT 239 (253)
Q Consensus 228 ~~~fD~Vi~~~~ 239 (253)
.++||+|+++..
T Consensus 223 ~~~fD~Ii~dPP 234 (332)
T 2igt_A 223 GSTYDIILTDPP 234 (332)
T ss_dssp TCCBSEEEECCC
T ss_pred CCCceEEEECCc
Confidence 468999999654
No 154
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.21 E-value=1.9e-11 Score=103.68 Aligned_cols=89 Identities=20% Similarity=0.291 Sum_probs=71.3
Q ss_pred ccchHHHHhccCCCCC---EEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEEeccC
Q 025428 151 LKSEPVEENDKYLSSW---SVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFS--CIKFLVDDVL 223 (253)
Q Consensus 151 ~~~~l~~~l~~~~~~~---~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~--~i~~~~~D~~ 223 (253)
....++..+....+.. +|||||||+|..+..+++. + ..+|+++|+|+++++.|+++++..|+. +++++++|+.
T Consensus 40 ~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~ 119 (221)
T 3dr5_A 40 MTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPL 119 (221)
T ss_dssp HHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHH
T ss_pred HHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHH
Confidence 3444555554443444 9999999999999999985 2 349999999999999999999999886 6999999987
Q ss_pred CCc--C-CCCccEEEEccc
Q 025428 224 DTK--L-ERQFQLVMDKGT 239 (253)
Q Consensus 224 ~~~--~-~~~fD~Vi~~~~ 239 (253)
+.. + +++||+|++...
T Consensus 120 ~~l~~~~~~~fD~V~~d~~ 138 (221)
T 3dr5_A 120 DVMSRLANDSYQLVFGQVS 138 (221)
T ss_dssp HHGGGSCTTCEEEEEECCC
T ss_pred HHHHHhcCCCcCeEEEcCc
Confidence 753 3 479999998654
No 155
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.21 E-value=2.1e-11 Score=101.47 Aligned_cols=72 Identities=24% Similarity=0.387 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC---cC--CCCccEEEEc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT---KL--ERQFQLVMDK 237 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~---~~--~~~fD~Vi~~ 237 (253)
.++.+|||+|||+|.++..+++.|. +|+|+|+|+.|++.++++ .++.++++|+.++ ++ ..+||+|++.
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 123 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKVPVGKDYDLICAN 123 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCSCCCCCEEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh------cccccchhhHHhhcccccccCCCccEEEEC
Confidence 3568999999999999999999966 999999999999999987 3677888888776 33 3569999999
Q ss_pred cccc
Q 025428 238 GTLD 241 (253)
Q Consensus 238 ~~l~ 241 (253)
.++|
T Consensus 124 ~~l~ 127 (227)
T 3e8s_A 124 FALL 127 (227)
T ss_dssp SCCC
T ss_pred chhh
Confidence 9988
No 156
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.20 E-value=6.2e-11 Score=103.78 Aligned_cols=81 Identities=21% Similarity=0.214 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeC-CHHHHHHHHHHH-----HhcCCC-----ceEEEEeccCCCc-----
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDY-SEDAINLAQSLA-----NRDGFS-----CIKFLVDDVLDTK----- 226 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~-s~~~l~~ar~~~-----~~~g~~-----~i~~~~~D~~~~~----- 226 (253)
.++.+|||+|||+|.++..+++.|..+|+|+|+ |+.|++.|++++ +.+++. +++++..|+.+..
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 467799999999999999999987669999999 899999999999 555553 6888877765531
Q ss_pred --CCCCccEEEEcccccee
Q 025428 227 --LERQFQLVMDKGTLDAI 243 (253)
Q Consensus 227 --~~~~fD~Vi~~~~l~~i 243 (253)
..++||+|++..++++.
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~ 176 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFH 176 (281)
T ss_dssp HHSCSSBSEEEEESCCSCG
T ss_pred hccCCCCCEEEEeCcccCh
Confidence 24789999998887764
No 157
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.20 E-value=4.3e-11 Score=107.69 Aligned_cols=89 Identities=17% Similarity=0.253 Sum_probs=74.1
Q ss_pred ccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCC-CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCC
Q 025428 151 LKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGF-SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLER 229 (253)
Q Consensus 151 ~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~-~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~ 229 (253)
....+++.+.. ..+.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.+++++..+++ +++++.+|+.+.. ++
T Consensus 184 ~~~~ll~~l~~-~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~~~~~~d~~~~~-~~ 260 (343)
T 2pjd_A 184 GSQLLLSTLTP-HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-EGEVFASNVFSEV-KG 260 (343)
T ss_dssp HHHHHHHHSCT-TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC-CCEEEECSTTTTC-CS
T ss_pred HHHHHHHhcCc-CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-CCEEEEccccccc-cC
Confidence 34555665533 3467999999999999999999854 3899999999999999999988887 5788999998754 67
Q ss_pred CccEEEEccccce
Q 025428 230 QFQLVMDKGTLDA 242 (253)
Q Consensus 230 ~fD~Vi~~~~l~~ 242 (253)
+||+|+++.++|+
T Consensus 261 ~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 261 RFDMIISNPPFHD 273 (343)
T ss_dssp CEEEEEECCCCCS
T ss_pred CeeEEEECCCccc
Confidence 8999999999886
No 158
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.20 E-value=1.9e-11 Score=111.90 Aligned_cols=78 Identities=14% Similarity=0.132 Sum_probs=68.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEEeccCCCcC-----CCCccEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS--CIKFLVDDVLDTKL-----ERQFQLVM 235 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~--~i~~~~~D~~~~~~-----~~~fD~Vi 235 (253)
.++.+|||+|||+|.++..++..|+.+|+|+|+|+.|++.|++|++.+++. +++++++|+.+... ..+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 567899999999999999999987779999999999999999999999987 89999999977421 35899999
Q ss_pred Ecccc
Q 025428 236 DKGTL 240 (253)
Q Consensus 236 ~~~~l 240 (253)
++...
T Consensus 291 ~DPP~ 295 (385)
T 2b78_A 291 IDPPS 295 (385)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 86544
No 159
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.20 E-value=5.6e-11 Score=102.23 Aligned_cols=73 Identities=23% Similarity=0.347 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccce
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLDA 242 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~~ 242 (253)
++.+|||||||+|.++..+++.|. +++|+|+|+.|++.|+++.. .+ ++++|+.+++++ ++||+|++..+++|
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~~~~~fD~v~~~~~~~~ 126 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPFPSGAFEAVLALGDVLS 126 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCSCTTCEEEEEECSSHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCCCCCCEEEEEEcchhhh
Confidence 567999999999999999999966 89999999999999998854 12 899999998875 78999999887766
Q ss_pred e
Q 025428 243 I 243 (253)
Q Consensus 243 i 243 (253)
+
T Consensus 127 ~ 127 (260)
T 2avn_A 127 Y 127 (260)
T ss_dssp H
T ss_pred c
Confidence 5
No 160
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.19 E-value=3.8e-11 Score=104.74 Aligned_cols=87 Identities=17% Similarity=0.057 Sum_probs=72.9
Q ss_pred chHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc--CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---
Q 025428 153 SEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ--GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL--- 227 (253)
Q Consensus 153 ~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~--g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~--- 227 (253)
+.+...+....++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.+++++++.|+.+++++++|+.+++.
T Consensus 72 s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 72 SMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLL 151 (274)
T ss_dssp GGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhh
Confidence 334444445567889999999999999999985 435999999999999999999999998899999999988754
Q ss_pred --CCCccEEEEccc
Q 025428 228 --ERQFQLVMDKGT 239 (253)
Q Consensus 228 --~~~fD~Vi~~~~ 239 (253)
.++||+|+++..
T Consensus 152 ~~~~~fD~Vl~d~P 165 (274)
T 3ajd_A 152 KNEIFFDKILLDAP 165 (274)
T ss_dssp HTTCCEEEEEEEEC
T ss_pred hccccCCEEEEcCC
Confidence 578999998743
No 161
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.19 E-value=4.2e-11 Score=106.72 Aligned_cols=89 Identities=12% Similarity=0.025 Sum_probs=74.1
Q ss_pred ccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc--CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-
Q 025428 151 LKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ--GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL- 227 (253)
Q Consensus 151 ~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~--g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~- 227 (253)
....+...+....++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.+++++++.|+.+++++++|+.+++.
T Consensus 105 ~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~ 184 (315)
T 1ixk_A 105 ASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGEL 184 (315)
T ss_dssp HHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGG
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccc
Confidence 33444444455578889999999999999999986 234899999999999999999999998899999999988764
Q ss_pred CCCccEEEEccc
Q 025428 228 ERQFQLVMDKGT 239 (253)
Q Consensus 228 ~~~fD~Vi~~~~ 239 (253)
+++||+|+++..
T Consensus 185 ~~~fD~Il~d~P 196 (315)
T 1ixk_A 185 NVEFDKILLDAP 196 (315)
T ss_dssp CCCEEEEEEECC
T ss_pred cccCCEEEEeCC
Confidence 578999998643
No 162
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.18 E-value=1.7e-11 Score=105.01 Aligned_cols=80 Identities=18% Similarity=0.242 Sum_probs=65.1
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc---CCCcEEEEeCCHHHHHHHHHHHHhc---CCCc-----------------------
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ---GFSDLTGVDYSEDAINLAQSLANRD---GFSC----------------------- 214 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~---g~~~v~gvD~s~~~l~~ar~~~~~~---g~~~----------------------- 214 (253)
++.+|||+|||+|.++..++.. +..+|+|+|+|+.|++.|++++... ++.+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4579999999999999999876 2338999999999999999988765 4432
Q ss_pred ---eE-------------EEEeccCCCcC-----C-CCccEEEEcccccee
Q 025428 215 ---IK-------------FLVDDVLDTKL-----E-RQFQLVMDKGTLDAI 243 (253)
Q Consensus 215 ---i~-------------~~~~D~~~~~~-----~-~~fD~Vi~~~~l~~i 243 (253)
++ ++++|+.+... . ++||+|+++..++..
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~ 181 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGER 181 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGS
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecc
Confidence 66 99999988642 4 589999998776654
No 163
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.18 E-value=6.5e-11 Score=98.67 Aligned_cols=73 Identities=23% Similarity=0.338 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCC--CcCC-CCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLD--TKLE-RQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~--~~~~-~~fD~Vi~~~~ 239 (253)
.++.+|||+|||+|.++..+++.| .+++|+|+|+.+++.++++. .+++++|+.+ .+++ ++||+|++..+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~~~~~~fD~v~~~~~ 102 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMPYEEEQFDCVIFGDV 102 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCCSCTTCEEEEEEESC
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCCCCCCccCEEEECCh
Confidence 367899999999999999999996 59999999999999998753 3789999987 4444 78999999999
Q ss_pred ccee
Q 025428 240 LDAI 243 (253)
Q Consensus 240 l~~i 243 (253)
++|+
T Consensus 103 l~~~ 106 (230)
T 3cc8_A 103 LEHL 106 (230)
T ss_dssp GGGS
T ss_pred hhhc
Confidence 9987
No 164
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.17 E-value=3.7e-11 Score=110.23 Aligned_cols=81 Identities=20% Similarity=0.281 Sum_probs=70.4
Q ss_pred hccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC-C-ceEEEEeccCCCcC-----CCCc
Q 025428 159 NDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF-S-CIKFLVDDVLDTKL-----ERQF 231 (253)
Q Consensus 159 l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~-~-~i~~~~~D~~~~~~-----~~~f 231 (253)
+....++.+|||+|||+|.++..++..|+.+|+|+|+|+.+++.|++|++.+++ . +++++++|+.+... ..+|
T Consensus 215 l~~~~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 215 TRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp HHHHCTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred HHHhhCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCC
Confidence 333357789999999999999999999877999999999999999999999998 7 89999999987632 3689
Q ss_pred cEEEEccc
Q 025428 232 QLVMDKGT 239 (253)
Q Consensus 232 D~Vi~~~~ 239 (253)
|+|+++..
T Consensus 295 D~Ii~dpP 302 (396)
T 3c0k_A 295 DVIVMDPP 302 (396)
T ss_dssp EEEEECCS
T ss_pred CEEEECCC
Confidence 99999753
No 165
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.17 E-value=5e-11 Score=104.45 Aligned_cols=80 Identities=18% Similarity=0.206 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCCcHHHHH----HHhc-CCCcE--EEEeCCHHHHHHHHHHHHhc-CCCceEE--EEeccCCCc------C
Q 025428 164 SSWSVLDIGTGNGLLLQE----LSKQ-GFSDL--TGVDYSEDAINLAQSLANRD-GFSCIKF--LVDDVLDTK------L 227 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~----la~~-g~~~v--~gvD~s~~~l~~ar~~~~~~-g~~~i~~--~~~D~~~~~------~ 227 (253)
++.+|||||||+|.++.. ++.. +...| +|+|+|++|++.|++++... ++.++.+ .++++.+++ +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 567999999999976543 3333 22233 99999999999999998654 5556554 556665443 2
Q ss_pred -CCCccEEEEcccccee
Q 025428 228 -ERQFQLVMDKGTLDAI 243 (253)
Q Consensus 228 -~~~fD~Vi~~~~l~~i 243 (253)
+++||+|++..+|||+
T Consensus 132 ~~~~fD~V~~~~~l~~~ 148 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYV 148 (292)
T ss_dssp CCCCEEEEEEESCGGGC
T ss_pred CCCceeEEEEeeeeeec
Confidence 4789999999999998
No 166
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.17 E-value=1e-10 Score=101.83 Aligned_cols=75 Identities=19% Similarity=0.267 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc--CCCcEEEEeCCHHHHHHHHHHHHhc-CCCceEEEEeccCCCcCCCCccEEEEc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ--GFSDLTGVDYSEDAINLAQSLANRD-GFSCIKFLVDDVLDTKLERQFQLVMDK 237 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~--g~~~v~gvD~s~~~l~~ar~~~~~~-g~~~i~~~~~D~~~~~~~~~fD~Vi~~ 237 (253)
.++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|+++++.+ |..+++++++|+.+...+++||+|+++
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIAD 186 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEEC
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCccEEEEc
Confidence 56789999999999999999987 2349999999999999999999888 877899999999884334789999983
No 167
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.17 E-value=1.1e-11 Score=107.67 Aligned_cols=81 Identities=16% Similarity=0.112 Sum_probs=68.2
Q ss_pred cCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCH-------HHHHHHHHHHHhcCCCc-eEEEEeccCCCc--CC--
Q 025428 161 KYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSE-------DAINLAQSLANRDGFSC-IKFLVDDVLDTK--LE-- 228 (253)
Q Consensus 161 ~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~-------~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~--~~-- 228 (253)
...++.+|||+|||+|.++..++..|. +|+|+|+|+ .+++.|+++++.+++.+ ++++++|+.++. ++
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 334568999999999999999999965 899999999 99999999988877765 999999998752 23
Q ss_pred -CCccEEEEccccce
Q 025428 229 -RQFQLVMDKGTLDA 242 (253)
Q Consensus 229 -~~fD~Vi~~~~l~~ 242 (253)
++||+|+++..+++
T Consensus 159 ~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 159 QGKPDIVYLDPMYPE 173 (258)
T ss_dssp HCCCSEEEECCCC--
T ss_pred CCCccEEEECCCCCC
Confidence 68999999887765
No 168
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.17 E-value=8.9e-11 Score=104.31 Aligned_cols=80 Identities=19% Similarity=0.369 Sum_probs=71.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l 240 (253)
.+..+|||+|||+|.++..+++. +..+++++|++ .+++.|++++...++. +++++++|+.+.++++.||+|++..++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchh
Confidence 45689999999999999999988 23499999999 9999999999888876 599999999987776669999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
|++
T Consensus 243 ~~~ 245 (335)
T 2r3s_A 243 HHF 245 (335)
T ss_dssp GGS
T ss_pred ccC
Confidence 987
No 169
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.16 E-value=4.1e-11 Score=109.04 Aligned_cols=103 Identities=11% Similarity=0.118 Sum_probs=78.8
Q ss_pred cceeecCCCcCCccccccchHHHHhccC--CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC
Q 025428 135 LCISISQGHMLNHVEDLKSEPVEENDKY--LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF 212 (253)
Q Consensus 135 ~~~~i~~~~~~~~~~~~~~~l~~~l~~~--~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~ 212 (253)
+.+.+.++.+.+........+...+... ..+.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++|++.+|+
T Consensus 182 ~~~~~~~~~F~Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~ 260 (369)
T 3bt7_A 182 MIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHI 260 (369)
T ss_dssp CEEEEETTSCCCSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCCCeecCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3345556666665555445555444332 23578999999999999999986 56999999999999999999999999
Q ss_pred CceEEEEeccCCCc--CC---------------CCccEEEEcc
Q 025428 213 SCIKFLVDDVLDTK--LE---------------RQFQLVMDKG 238 (253)
Q Consensus 213 ~~i~~~~~D~~~~~--~~---------------~~fD~Vi~~~ 238 (253)
.+++|+++|+.+.. .. .+||+|+.+.
T Consensus 261 ~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dP 303 (369)
T 3bt7_A 261 DNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDP 303 (369)
T ss_dssp CSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECC
T ss_pred CceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECc
Confidence 89999999997752 11 2799998754
No 170
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.16 E-value=5.3e-11 Score=109.09 Aligned_cols=83 Identities=24% Similarity=0.318 Sum_probs=71.1
Q ss_pred HHhccCC-CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcC-----CC
Q 025428 157 EENDKYL-SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKL-----ER 229 (253)
Q Consensus 157 ~~l~~~~-~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~-----~~ 229 (253)
.++.... ++.+|||+|||+|.++..++..|+.+|+|+|+|+.+++.|+++++.+++. +++++++|+.+... .+
T Consensus 209 ~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~ 288 (396)
T 2as0_A 209 LALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGE 288 (396)
T ss_dssp HHHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTC
T ss_pred HHHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCC
Confidence 3333444 77899999999999999999987779999999999999999999999997 79999999987632 46
Q ss_pred CccEEEEccc
Q 025428 230 QFQLVMDKGT 239 (253)
Q Consensus 230 ~fD~Vi~~~~ 239 (253)
+||+|+++..
T Consensus 289 ~fD~Vi~dpP 298 (396)
T 2as0_A 289 KFDIVVLDPP 298 (396)
T ss_dssp CEEEEEECCC
T ss_pred CCCEEEECCC
Confidence 8999998643
No 171
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.16 E-value=1.1e-10 Score=105.60 Aligned_cols=79 Identities=20% Similarity=0.168 Sum_probs=69.8
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCC--cCCCCccEEEEccc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDT--KLERQFQLVMDKGT 239 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~--~~~~~fD~Vi~~~~ 239 (253)
...+|||||||+|.++..+++. +..+++++|+ +.+++.|++++...++. +++++.+|+.+. +++++||+|++..+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~v 257 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQF 257 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEech
Confidence 5679999999999999999986 2348999999 99999999999887774 699999999986 45688999999999
Q ss_pred ccee
Q 025428 240 LDAI 243 (253)
Q Consensus 240 l~~i 243 (253)
||++
T Consensus 258 lh~~ 261 (363)
T 3dp7_A 258 LDCF 261 (363)
T ss_dssp STTS
T ss_pred hhhC
Confidence 9976
No 172
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.15 E-value=2e-10 Score=98.01 Aligned_cols=76 Identities=18% Similarity=0.223 Sum_probs=67.1
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhc-CCCceEEEEeccCCCcCC-CCccEEEEc
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRD-GFSCIKFLVDDVLDTKLE-RQFQLVMDK 237 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~-g~~~i~~~~~D~~~~~~~-~~fD~Vi~~ 237 (253)
..++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.|+++++.. |..+++++++|+.+.+++ ++||+|+++
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~ 173 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD 173 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC
Confidence 357789999999999999999988 4 459999999999999999999887 766899999999988555 789999984
No 173
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.15 E-value=1.4e-10 Score=104.18 Aligned_cols=72 Identities=18% Similarity=0.130 Sum_probs=65.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEcc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKG 238 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~ 238 (253)
.++.+|||+|||+|.++.. ++ +..+|+|+|+|+.+++.|++|++.+++. +++++++|+.+.. ++||+|+++.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dp 266 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNL 266 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECC
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECC
Confidence 4778999999999999999 87 5669999999999999999999999984 7999999999876 8899999863
No 174
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.15 E-value=1e-10 Score=106.44 Aligned_cols=78 Identities=17% Similarity=0.229 Sum_probs=69.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCC-CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCC-CcC--CCCccEEEEcc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGF-SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLD-TKL--ERQFQLVMDKG 238 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~-~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~-~~~--~~~fD~Vi~~~ 238 (253)
.++.+|||+| |+|.++..++..+. .+|+|+|+|+.|++.|+++++.+|+.+++++++|+.+ ++. .++||+|+++.
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 3578999999 99999999998865 6999999999999999999999888789999999998 553 36899999987
Q ss_pred ccc
Q 025428 239 TLD 241 (253)
Q Consensus 239 ~l~ 241 (253)
+++
T Consensus 250 p~~ 252 (373)
T 2qm3_A 250 PET 252 (373)
T ss_dssp CSS
T ss_pred CCc
Confidence 664
No 175
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.15 E-value=5e-11 Score=102.59 Aligned_cols=89 Identities=12% Similarity=0.203 Sum_probs=71.9
Q ss_pred ccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCC-c
Q 025428 151 LKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDT-K 226 (253)
Q Consensus 151 ~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~-~ 226 (253)
....++..+....+..+|||||||+|..+..+++. + ..+|+++|+|+.+++.|+++++..|+. +++++++|+.+. +
T Consensus 66 ~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 145 (247)
T 1sui_A 66 DEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLD 145 (247)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHH
Confidence 34445555544456789999999999999999987 2 349999999999999999999998885 699999999764 2
Q ss_pred -C------CCCccEEEEccc
Q 025428 227 -L------ERQFQLVMDKGT 239 (253)
Q Consensus 227 -~------~~~fD~Vi~~~~ 239 (253)
+ .++||+|++...
T Consensus 146 ~l~~~~~~~~~fD~V~~d~~ 165 (247)
T 1sui_A 146 EMIKDEKNHGSYDFIFVDAD 165 (247)
T ss_dssp HHHHSGGGTTCBSEEEECSC
T ss_pred HHHhccCCCCCEEEEEEcCc
Confidence 2 478999998653
No 176
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.14 E-value=3.8e-11 Score=101.99 Aligned_cols=76 Identities=16% Similarity=0.211 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCC-HHHHHHH---HHHHHhcCCCceEEEEeccCCCcC--CCCccEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYS-EDAINLA---QSLANRDGFSCIKFLVDDVLDTKL--ERQFQLVM 235 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s-~~~l~~a---r~~~~~~g~~~i~~~~~D~~~~~~--~~~fD~Vi 235 (253)
.++.+|||||||+|.++..+++. ...+|+|+|+| +.|++.| ++++...++.++.++++|+.+++. .+.+|.|.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 36779999999999999999965 23389999999 7777777 888888888899999999998853 24556665
Q ss_pred Ecc
Q 025428 236 DKG 238 (253)
Q Consensus 236 ~~~ 238 (253)
++.
T Consensus 103 ~~~ 105 (225)
T 3p2e_A 103 ILF 105 (225)
T ss_dssp EES
T ss_pred EeC
Confidence 544
No 177
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.14 E-value=1.8e-10 Score=104.03 Aligned_cols=79 Identities=20% Similarity=0.193 Sum_probs=69.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l 240 (253)
.++.+|||||||+|.++..+++.. ..+++++|+ +.+++.|++++...++. +++++++|+.+ +++..||+|++..++
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~D~v~~~~vl 258 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVTADVVLLSFVL 258 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCCCCEEEEeccc
Confidence 467899999999999999999883 338999999 99999999999888876 79999999986 345559999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
|++
T Consensus 259 ~~~ 261 (374)
T 1qzz_A 259 LNW 261 (374)
T ss_dssp GGS
T ss_pred cCC
Confidence 986
No 178
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.14 E-value=4e-11 Score=104.71 Aligned_cols=80 Identities=21% Similarity=0.224 Sum_probs=61.3
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc-----------------CC-------------C
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRD-----------------GF-------------S 213 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~-----------------g~-------------~ 213 (253)
++.+|||||||+|.+...++..+..+|+|+|+|+.|++.|+++++.. +. .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 67899999999999665555543459999999999999999876431 10 0
Q ss_pred ceEEEEeccCC-CcC------CCCccEEEEcccccee
Q 025428 214 CIKFLVDDVLD-TKL------ERQFQLVMDKGTLDAI 243 (253)
Q Consensus 214 ~i~~~~~D~~~-~~~------~~~fD~Vi~~~~l~~i 243 (253)
.++++++|+.+ +++ +++||+|+++.+||++
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~ 187 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAV 187 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHH
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhh
Confidence 15678889987 443 2569999999999996
No 179
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.14 E-value=1.5e-10 Score=103.77 Aligned_cols=78 Identities=17% Similarity=0.242 Sum_probs=70.0
Q ss_pred CCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCc--CCCCccEEEEcccc
Q 025428 165 SWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTK--LERQFQLVMDKGTL 240 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~--~~~~fD~Vi~~~~l 240 (253)
+.+|||||||+|.++..+++. +..+++++|+ +.+++.+++++...++. +++++.+|+.+.+ +++.||+|++..+|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 789999999999999999987 3348999999 88999999999888875 5999999999987 66789999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
|++
T Consensus 259 h~~ 261 (352)
T 3mcz_A 259 HYF 261 (352)
T ss_dssp GGS
T ss_pred ccC
Confidence 987
No 180
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.14 E-value=7.6e-11 Score=98.76 Aligned_cols=68 Identities=21% Similarity=0.267 Sum_probs=61.1
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEccccce
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTLDA 242 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l~~ 242 (253)
++.+|||+|||+|.++..++.. +|+|+|+.|++.++++ +++++++|+.+++++ ++||+|++..++++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 4789999999999999988755 9999999999999986 678999999988765 78999999999998
Q ss_pred e
Q 025428 243 I 243 (253)
Q Consensus 243 i 243 (253)
+
T Consensus 115 ~ 115 (219)
T 1vlm_A 115 V 115 (219)
T ss_dssp S
T ss_pred c
Confidence 7
No 181
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.14 E-value=9.8e-11 Score=99.01 Aligned_cols=78 Identities=18% Similarity=0.250 Sum_probs=67.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCC-c-C--CCCccEEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDT-K-L--ERQFQLVMD 236 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~-~-~--~~~fD~Vi~ 236 (253)
.++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.|++++...++. +++++++|+.+. + . +++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 467899999999999999999882 349999999999999999999988885 599999999875 2 2 478999998
Q ss_pred cccc
Q 025428 237 KGTL 240 (253)
Q Consensus 237 ~~~l 240 (253)
+...
T Consensus 133 ~~~~ 136 (233)
T 2gpy_A 133 DAAK 136 (233)
T ss_dssp EGGG
T ss_pred CCCH
Confidence 7764
No 182
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.13 E-value=1.9e-10 Score=100.47 Aligned_cols=78 Identities=18% Similarity=0.198 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCC---cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc-----------CC
Q 025428 164 SSWSVLDIGTGN---GLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK-----------LE 228 (253)
Q Consensus 164 ~~~~VLDiGcGt---G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~-----------~~ 228 (253)
...+|||||||+ |.++..+.+. ...+|+++|+|+.||+.|++++... .+++++++|+.+.. ++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD--PNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC--TTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC--CCeEEEEeeCCCchhhhccchhhccCC
Confidence 447999999999 9988777665 2349999999999999999988532 47999999998642 23
Q ss_pred -CCccEEEEcccccee
Q 025428 229 -RQFQLVMDKGTLDAI 243 (253)
Q Consensus 229 -~~fD~Vi~~~~l~~i 243 (253)
.+||+|++..+|||+
T Consensus 155 ~~~~d~v~~~~vlh~~ 170 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYL 170 (274)
T ss_dssp TTSCCEEEETTTGGGS
T ss_pred CCCCEEEEEechhhhC
Confidence 589999999999998
No 183
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.13 E-value=7e-11 Score=102.57 Aligned_cols=80 Identities=14% Similarity=0.120 Sum_probs=73.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
....+|||||||+|-++..++.. +..+++++|+++.|++.+++++..+|+ +..+.+.|....+++++||+|++.-++|
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~-~~~~~v~D~~~~~p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV-PHRTNVADLLEDRLDEPADVTLLLKTLP 209 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC-CEEEEECCTTTSCCCSCCSEEEETTCHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeeecccCCCCCcchHHHHHHHH
Confidence 45679999999999999999887 556999999999999999999999998 5899999999988889999999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
++
T Consensus 210 ~L 211 (281)
T 3lcv_B 210 CL 211 (281)
T ss_dssp HH
T ss_pred Hh
Confidence 87
No 184
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.12 E-value=3.3e-10 Score=100.87 Aligned_cols=90 Identities=16% Similarity=0.151 Sum_probs=74.4
Q ss_pred cccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc--CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC
Q 025428 150 DLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ--GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL 227 (253)
Q Consensus 150 ~~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~--g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~ 227 (253)
+..+.+...+..+.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++++++.|+.+++++++|+.++..
T Consensus 88 d~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~ 167 (309)
T 2b9e_A 88 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSP 167 (309)
T ss_dssp CTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCT
T ss_pred CHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCc
Confidence 344445555555678899999999999999999986 335899999999999999999999999899999999988753
Q ss_pred C----CCccEEEEccc
Q 025428 228 E----RQFQLVMDKGT 239 (253)
Q Consensus 228 ~----~~fD~Vi~~~~ 239 (253)
. .+||.|+++..
T Consensus 168 ~~~~~~~fD~Vl~D~P 183 (309)
T 2b9e_A 168 SDPRYHEVHYILLDPS 183 (309)
T ss_dssp TCGGGTTEEEEEECCC
T ss_pred cccccCCCCEEEEcCC
Confidence 2 57999998643
No 185
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.12 E-value=1.7e-10 Score=100.06 Aligned_cols=81 Identities=20% Similarity=0.277 Sum_probs=65.4
Q ss_pred hHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-----
Q 025428 154 EPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE----- 228 (253)
Q Consensus 154 ~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~----- 228 (253)
.+++.+.. .++.+|||||||+|.++..+++.+ .+|+|+|+++.|++.+++++.. ..+++++++|+.+++++
T Consensus 20 ~iv~~~~~-~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~~~~~~ 95 (255)
T 3tqs_A 20 KIVSAIHP-QKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFSSVKTD 95 (255)
T ss_dssp HHHHHHCC-CTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGGGSCCS
T ss_pred HHHHhcCC-CCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHHHhccC
Confidence 34444432 467899999999999999999996 5999999999999999999865 35899999999998753
Q ss_pred CCccEEEEccc
Q 025428 229 RQFQLVMDKGT 239 (253)
Q Consensus 229 ~~fD~Vi~~~~ 239 (253)
++|| |++|-.
T Consensus 96 ~~~~-vv~NlP 105 (255)
T 3tqs_A 96 KPLR-VVGNLP 105 (255)
T ss_dssp SCEE-EEEECC
T ss_pred CCeE-EEecCC
Confidence 4688 666543
No 186
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.12 E-value=8.7e-11 Score=99.91 Aligned_cols=86 Identities=19% Similarity=0.200 Sum_probs=69.2
Q ss_pred HHHhccCCCCCEEEEEcCCCcHHHHHHHhcC--CCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCC-c-C---
Q 025428 156 VEENDKYLSSWSVLDIGTGNGLLLQELSKQG--FSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDT-K-L--- 227 (253)
Q Consensus 156 ~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g--~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~-~-~--- 227 (253)
+..+....++.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++...|+.+ ++++++|+.+. + +
T Consensus 52 l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~ 131 (239)
T 2hnk_A 52 LNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDS 131 (239)
T ss_dssp HHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhh
Confidence 3333333567899999999999999999882 3599999999999999999999888865 99999998663 1 1
Q ss_pred ------------C-CCccEEEEccccc
Q 025428 228 ------------E-RQFQLVMDKGTLD 241 (253)
Q Consensus 228 ------------~-~~fD~Vi~~~~l~ 241 (253)
+ ++||+|++.....
T Consensus 132 ~~~~~~~~~f~~~~~~fD~I~~~~~~~ 158 (239)
T 2hnk_A 132 KSAPSWASDFAFGPSSIDLFFLDADKE 158 (239)
T ss_dssp SSCCGGGTTTCCSTTCEEEEEECSCGG
T ss_pred cccccccccccCCCCCcCEEEEeCCHH
Confidence 2 6899999876543
No 187
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.12 E-value=7.4e-11 Score=98.22 Aligned_cols=86 Identities=14% Similarity=0.145 Sum_probs=68.8
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCC-c-
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDT-K- 226 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~-~- 226 (253)
...++..+....+..+|||+|||+|..+..+++. + ..+|+++|+|+.+++.|+++++..++. +++++++|+.+. +
T Consensus 44 ~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 123 (210)
T 3c3p_A 44 TGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAG 123 (210)
T ss_dssp HHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTT
T ss_pred HHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhcc
Confidence 3444444444346789999999999999999987 2 349999999999999999999888876 599999999764 2
Q ss_pred CCCCccEEEEcc
Q 025428 227 LERQFQLVMDKG 238 (253)
Q Consensus 227 ~~~~fD~Vi~~~ 238 (253)
.++ ||+|+++.
T Consensus 124 ~~~-fD~v~~~~ 134 (210)
T 3c3p_A 124 QRD-IDILFMDC 134 (210)
T ss_dssp CCS-EEEEEEET
T ss_pred CCC-CCEEEEcC
Confidence 236 99999864
No 188
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.12 E-value=2.9e-10 Score=95.55 Aligned_cols=75 Identities=16% Similarity=0.271 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc----CCCCccEEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK----LERQFQLVMD 236 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~----~~~~fD~Vi~ 236 (253)
.++.+|||+|||+|.++..+++. | ..+|+|+|+|+.|++.++++++.. .+++++++|+.+.. ++++||+|++
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCCceEEEE
Confidence 46789999999999999999987 4 259999999999999999988765 58999999998842 3468999997
Q ss_pred ccc
Q 025428 237 KGT 239 (253)
Q Consensus 237 ~~~ 239 (253)
+..
T Consensus 150 ~~~ 152 (227)
T 1g8a_A 150 DVA 152 (227)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 189
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.11 E-value=2.4e-10 Score=96.65 Aligned_cols=75 Identities=16% Similarity=0.213 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC---cC-CCCccEEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT---KL-ERQFQLVMD 236 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~---~~-~~~fD~Vi~ 236 (253)
.++.+|||+|||+|.++..+++. | ..+|+|+|+|+.|++.+.++++.+ .+++++++|+.+. +. .++||+|++
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 46789999999999999999987 3 359999999999999888887765 5899999999884 32 478999998
Q ss_pred ccc
Q 025428 237 KGT 239 (253)
Q Consensus 237 ~~~ 239 (253)
+..
T Consensus 154 ~~~ 156 (233)
T 2ipx_A 154 DVA 156 (233)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
No 190
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.11 E-value=2e-10 Score=105.19 Aligned_cols=79 Identities=25% Similarity=0.387 Sum_probs=70.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCC---------------------------------------CcEEEEeCCHHHHHHH
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGF---------------------------------------SDLTGVDYSEDAINLA 203 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~---------------------------------------~~v~gvD~s~~~l~~a 203 (253)
.++.+|||+|||+|.+++.++..+. .+|+|+|+++.|++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 5678999999999999999987632 2699999999999999
Q ss_pred HHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 204 QSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 204 r~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
++|+..+|+. +++|.++|+.+++.+.+||+|+++..+.
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg 312 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYG 312 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCC
T ss_pred HHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCc
Confidence 9999999987 6999999999987778999999987654
No 191
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.11 E-value=1.7e-11 Score=105.21 Aligned_cols=88 Identities=19% Similarity=0.165 Sum_probs=72.0
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcC-
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKL- 227 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~- 227 (253)
...++..+....+..+|||||||+|..+..+++. + ..+|+++|+++.+++.|+++++..|+. +++++++|+.+...
T Consensus 48 ~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~ 127 (242)
T 3r3h_A 48 QAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHS 127 (242)
T ss_dssp HHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHH
Confidence 4445555544456789999999999999999985 2 349999999999999999999999986 79999999977532
Q ss_pred ------CCCccEEEEccc
Q 025428 228 ------ERQFQLVMDKGT 239 (253)
Q Consensus 228 ------~~~fD~Vi~~~~ 239 (253)
.++||+|++...
T Consensus 128 ~~~~~~~~~fD~V~~d~~ 145 (242)
T 3r3h_A 128 LLNEGGEHQFDFIFIDAD 145 (242)
T ss_dssp HHHHHCSSCEEEEEEESC
T ss_pred HhhccCCCCEeEEEEcCC
Confidence 478999998654
No 192
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.11 E-value=8.8e-11 Score=98.09 Aligned_cols=73 Identities=15% Similarity=0.146 Sum_probs=59.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHH----HHHhcCCCceEEEEeccCCCcCC-CCccEEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQS----LANRDGFSCIKFLVDDVLDTKLE-RQFQLVMD 236 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~----~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~ 236 (253)
.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.+.+ +....++.+++++++|+.+++++ ++ |.|+.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 467899999999999999999983 3499999999999886433 33346777899999999998876 44 76663
No 193
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.11 E-value=4.4e-10 Score=95.30 Aligned_cols=74 Identities=26% Similarity=0.289 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEeccCCCc-CCCCccEEEEc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVDDVLDTK-LERQFQLVMDK 237 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~D~~~~~-~~~~fD~Vi~~ 237 (253)
.++.+|||+|||+|.++..+++. ..+++++|+++.+++.|+++.+..++ .+++++++|+.+.. .+++||+|+++
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 165 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD 165 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC
Confidence 57789999999999999999998 55999999999999999999988887 57999999999875 34789999984
No 194
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.11 E-value=2.6e-10 Score=104.74 Aligned_cols=79 Identities=22% Similarity=0.267 Sum_probs=69.4
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhcCC---------------------------------------CcEEEEeCCHHHHHH
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQGF---------------------------------------SDLTGVDYSEDAINL 202 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~g~---------------------------------------~~v~gvD~s~~~l~~ 202 (253)
..++..|||++||+|.+++.++..+. .+|+|+|+|+.|++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 35678999999999999999887632 259999999999999
Q ss_pred HHHHHHhcCCCc-eEEEEeccCCCcCCCCccEEEEcccc
Q 025428 203 AQSLANRDGFSC-IKFLVDDVLDTKLERQFQLVMDKGTL 240 (253)
Q Consensus 203 ar~~~~~~g~~~-i~~~~~D~~~~~~~~~fD~Vi~~~~l 240 (253)
|++|++.+|+.+ ++++++|+.+++.+.+||+|+++..+
T Consensus 279 Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 279 AKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCC
T ss_pred HHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCC
Confidence 999999999874 99999999998877899999998654
No 195
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.11 E-value=1.2e-10 Score=114.39 Aligned_cols=86 Identities=16% Similarity=0.135 Sum_probs=73.0
Q ss_pred hHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEEeccCCCc--CCC
Q 025428 154 EPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS--CIKFLVDDVLDTK--LER 229 (253)
Q Consensus 154 ~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~--~i~~~~~D~~~~~--~~~ 229 (253)
.....+....++.+|||+|||||.++..++..|+.+|+++|+|+.+++.|++|++.+|+. +++++++|+.+.. ..+
T Consensus 529 ~~r~~l~~~~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~ 608 (703)
T 3v97_A 529 IARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANE 608 (703)
T ss_dssp HHHHHHHHHCTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCC
T ss_pred HHHHHHHHhcCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCC
Confidence 334444445578899999999999999999988878999999999999999999999986 6999999998742 247
Q ss_pred CccEEEEccc
Q 025428 230 QFQLVMDKGT 239 (253)
Q Consensus 230 ~fD~Vi~~~~ 239 (253)
+||+|+++..
T Consensus 609 ~fD~Ii~DPP 618 (703)
T 3v97_A 609 QFDLIFIDPP 618 (703)
T ss_dssp CEEEEEECCC
T ss_pred CccEEEECCc
Confidence 8999998764
No 196
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.11 E-value=1e-10 Score=98.29 Aligned_cols=86 Identities=15% Similarity=0.185 Sum_probs=69.6
Q ss_pred hHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCc--C-
Q 025428 154 EPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTK--L- 227 (253)
Q Consensus 154 ~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~--~- 227 (253)
.++..+....++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|+++++..|+. +++++++|+.+.. +
T Consensus 59 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~ 138 (229)
T 2avd_A 59 QLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELL 138 (229)
T ss_dssp HHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHH
Confidence 34444444467789999999999999999986 2 459999999999999999999988874 7999999986642 1
Q ss_pred -C---CCccEEEEccc
Q 025428 228 -E---RQFQLVMDKGT 239 (253)
Q Consensus 228 -~---~~fD~Vi~~~~ 239 (253)
. ++||+|+++..
T Consensus 139 ~~~~~~~~D~v~~d~~ 154 (229)
T 2avd_A 139 AAGEAGTFDVAVVDAD 154 (229)
T ss_dssp HTTCTTCEEEEEECSC
T ss_pred hcCCCCCccEEEECCC
Confidence 1 68999998653
No 197
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.10 E-value=2.8e-10 Score=105.70 Aligned_cols=78 Identities=17% Similarity=0.287 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHH-------HHHHHhcC--CCceEEEEeccCCC--cC---
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLA-------QSLANRDG--FSCIKFLVDDVLDT--KL--- 227 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~a-------r~~~~~~g--~~~i~~~~~D~~~~--~~--- 227 (253)
.++.+|||||||+|.++..++.. |..+|+|+|+++.+++.| +++++..| +.+++++++|.... ++
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~ 320 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAEL 320 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccc
Confidence 57789999999999999999996 666899999999999999 88888888 56899999865432 11
Q ss_pred CCCccEEEEcccc
Q 025428 228 ERQFQLVMDKGTL 240 (253)
Q Consensus 228 ~~~fD~Vi~~~~l 240 (253)
.++||+|+++.++
T Consensus 321 ~~~FDvIvvn~~l 333 (433)
T 1u2z_A 321 IPQCDVILVNNFL 333 (433)
T ss_dssp GGGCSEEEECCTT
T ss_pred cCCCCEEEEeCcc
Confidence 3789999987655
No 198
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.10 E-value=1.7e-10 Score=101.19 Aligned_cols=80 Identities=15% Similarity=0.279 Sum_probs=62.8
Q ss_pred CCCEEEEEcCCCcH----HHHHHHhc-C----CCcEEEEeCCHHHHHHHHHHHHh-----------------------cC
Q 025428 164 SSWSVLDIGTGNGL----LLQELSKQ-G----FSDLTGVDYSEDAINLAQSLANR-----------------------DG 211 (253)
Q Consensus 164 ~~~~VLDiGcGtG~----~~~~la~~-g----~~~v~gvD~s~~~l~~ar~~~~~-----------------------~g 211 (253)
+..+|||+|||||. +++.+++. + ..+|+|+|+|+.||+.|+++... .|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34699999999998 66666665 3 12899999999999999987410 11
Q ss_pred -C-------CceEEEEeccCCCcCC--CCccEEEEcccccee
Q 025428 212 -F-------SCIKFLVDDVLDTKLE--RQFQLVMDKGTLDAI 243 (253)
Q Consensus 212 -~-------~~i~~~~~D~~~~~~~--~~fD~Vi~~~~l~~i 243 (253)
. .+|.|.++|+.+.+++ ++||+|+|..+++|+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf 226 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF 226 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGS
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhC
Confidence 0 2589999999986543 789999999999887
No 199
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.10 E-value=1e-10 Score=103.94 Aligned_cols=84 Identities=11% Similarity=0.108 Sum_probs=68.6
Q ss_pred hHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----
Q 025428 154 EPVEENDKYLSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----- 227 (253)
Q Consensus 154 ~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----- 227 (253)
.+++.+. ..++.+|||+|||+|.++..++++. ..+|+|+|+|+.|++.|+++++.++ .+++++++|+.+++.
T Consensus 17 e~l~~L~-~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~~~ 94 (301)
T 1m6y_A 17 EVIEFLK-PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLKTL 94 (301)
T ss_dssp HHHHHHC-CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHHHT
T ss_pred HHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHHhc
Confidence 3444443 2467899999999999999999883 3599999999999999999998877 689999999988641
Q ss_pred C-CCccEEEEccc
Q 025428 228 E-RQFQLVMDKGT 239 (253)
Q Consensus 228 ~-~~fD~Vi~~~~ 239 (253)
. .+||.|+++..
T Consensus 95 g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 95 GIEKVDGILMDLG 107 (301)
T ss_dssp TCSCEEEEEEECS
T ss_pred CCCCCCEEEEcCc
Confidence 1 58999998653
No 200
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.10 E-value=1.5e-10 Score=98.77 Aligned_cols=87 Identities=15% Similarity=0.245 Sum_probs=71.1
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCc--
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTK-- 226 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~-- 226 (253)
...++..+....+..+|||||||+|..+..+++. + ..+++++|+++.+++.|+++++..|+. +++++++|+.+..
T Consensus 58 ~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~ 137 (237)
T 3c3y_A 58 AGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDN 137 (237)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHH
Confidence 3445555444457789999999999999999987 2 349999999999999999999998886 5999999997642
Q ss_pred C------CCCccEEEEcc
Q 025428 227 L------ERQFQLVMDKG 238 (253)
Q Consensus 227 ~------~~~fD~Vi~~~ 238 (253)
+ .++||+|++..
T Consensus 138 l~~~~~~~~~fD~I~~d~ 155 (237)
T 3c3y_A 138 LLQGQESEGSYDFGFVDA 155 (237)
T ss_dssp HHHSTTCTTCEEEEEECS
T ss_pred HHhccCCCCCcCEEEECC
Confidence 2 47899999864
No 201
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.10 E-value=3.6e-10 Score=101.67 Aligned_cols=79 Identities=19% Similarity=0.312 Sum_probs=68.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l 240 (253)
.++.+|||||||+|.++..+++.+ ..+++++|+ +.+++.|++++...++. +++++++|+.+ +++..||+|++..++
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~D~v~~~~vl 259 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPRKADAIILSFVL 259 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSSCEEEEEEESCG
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCCCccEEEEcccc
Confidence 467899999999999999999884 238999999 99999999999888876 79999999986 344559999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
|++
T Consensus 260 ~~~ 262 (360)
T 1tw3_A 260 LNW 262 (360)
T ss_dssp GGS
T ss_pred cCC
Confidence 986
No 202
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.09 E-value=4.4e-10 Score=97.65 Aligned_cols=76 Identities=18% Similarity=0.261 Sum_probs=66.5
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEeccCCCcCCCCccEEEEc
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVDDVLDTKLERQFQLVMDK 237 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~D~~~~~~~~~fD~Vi~~ 237 (253)
..++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.|+++++..++ .+++++++|+.+...+++||+|+++
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~ 188 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLD 188 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEEC
Confidence 356789999999999999999988 4 45999999999999999999998887 4799999999887334789999985
No 203
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.09 E-value=3.5e-10 Score=97.94 Aligned_cols=76 Identities=20% Similarity=0.275 Sum_probs=66.4
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhc-C--CCceEEEEeccCCCcCC-CCccEEE
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRD-G--FSCIKFLVDDVLDTKLE-RQFQLVM 235 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~-g--~~~i~~~~~D~~~~~~~-~~fD~Vi 235 (253)
..++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.|+++++.. | ..+++++++|+.+.+++ ++||+|+
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~ 176 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAV 176 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEE
Confidence 357789999999999999999986 3 459999999999999999999877 5 56899999999988764 7899999
Q ss_pred Ec
Q 025428 236 DK 237 (253)
Q Consensus 236 ~~ 237 (253)
++
T Consensus 177 ~~ 178 (280)
T 1i9g_A 177 LD 178 (280)
T ss_dssp EE
T ss_pred EC
Confidence 84
No 204
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.09 E-value=1e-10 Score=106.77 Aligned_cols=82 Identities=21% Similarity=0.269 Sum_probs=70.7
Q ss_pred HHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----CCC
Q 025428 156 VEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----ERQ 230 (253)
Q Consensus 156 ~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~~~ 230 (253)
...+... ++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|+++++.+++.+++++++|+.+... .++
T Consensus 202 ~~~~~~~-~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~ 279 (382)
T 1wxx_A 202 RLYMERF-RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGER 279 (382)
T ss_dssp HHHGGGC-CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred HHHHHhc-CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCC
Confidence 3445555 6789999999999999999998 56999999999999999999999999889999999987642 468
Q ss_pred ccEEEEccc
Q 025428 231 FQLVMDKGT 239 (253)
Q Consensus 231 fD~Vi~~~~ 239 (253)
||+|+++..
T Consensus 280 fD~Ii~dpP 288 (382)
T 1wxx_A 280 FDLVVLDPP 288 (382)
T ss_dssp EEEEEECCC
T ss_pred eeEEEECCC
Confidence 999998643
No 205
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.09 E-value=2.8e-10 Score=97.98 Aligned_cols=73 Identities=21% Similarity=0.213 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l 240 (253)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|+++. .++.++++|+.+++++ ++||+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~ 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPFSDTSMDAIIRIYAP 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSBCTTCEEEEEEESCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCCCCCceeEEEEeCCh
Confidence 36789999999999999999987 2349999999999999998874 3689999999988765 799999986653
No 206
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.09 E-value=3.9e-10 Score=100.54 Aligned_cols=78 Identities=22% Similarity=0.169 Sum_probs=68.0
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
+..+|||||||+|.++..+++. +..+++++|+ +.+++.|++++...++. +++++.+|+.+ +.+.+||+|++..+||
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~p~~~D~v~~~~vlh 246 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PLPAGAGGYVLSAVLH 246 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCCCSCSEEEEESCGG
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CCCCCCcEEEEehhhc
Confidence 4579999999999999999987 3348999999 99999999999888874 69999999983 4455899999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
++
T Consensus 247 ~~ 248 (332)
T 3i53_A 247 DW 248 (332)
T ss_dssp GS
T ss_pred cC
Confidence 87
No 207
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.09 E-value=4.5e-10 Score=101.23 Aligned_cols=79 Identities=19% Similarity=0.159 Sum_probs=69.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcCCCCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKLERQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~~~fD~Vi~~~~l 240 (253)
.++.+|||||||+|.++..+++.. ..+++++|+ +.+++.|+++++..++.+ ++++.+|+.+.++++ +|+|++..++
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~D~v~~~~vl 266 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE-ADAVLFCRIL 266 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC-CSEEEEESCG
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC-CCEEEEechh
Confidence 467899999999999999999882 338999999 999999999998888765 999999999876654 4999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
|++
T Consensus 267 h~~ 269 (359)
T 1x19_A 267 YSA 269 (359)
T ss_dssp GGS
T ss_pred ccC
Confidence 986
No 208
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.08 E-value=3.8e-10 Score=103.38 Aligned_cols=80 Identities=18% Similarity=0.299 Sum_probs=69.9
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhcCC---------------------------------------CcEEEEeCCHHHHHH
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQGF---------------------------------------SDLTGVDYSEDAINL 202 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~g~---------------------------------------~~v~gvD~s~~~l~~ 202 (253)
..++..|||.+||+|.+++.++..+. .+|+|+|+|+.|++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 35678999999999999999887632 259999999999999
Q ss_pred HHHHHHhcCCCc-eEEEEeccCCCcCCCCccEEEEccccc
Q 025428 203 AQSLANRDGFSC-IKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 203 ar~~~~~~g~~~-i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
|++|++.+|+.+ ++++++|+.+++.+.+||+|+++..+.
T Consensus 272 Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG 311 (384)
T 3ldg_A 272 ARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYG 311 (384)
T ss_dssp HHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCT
T ss_pred HHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchh
Confidence 999999999875 999999999987778999999987654
No 209
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.08 E-value=5.2e-10 Score=95.79 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CC-CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc---C-CCCccEEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GF-SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK---L-ERQFQLVMD 236 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~-~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~---~-~~~fD~Vi~ 236 (253)
.++.+|||+|||+|.++..+++. |. .+|+|+|++++|++.++++++.. .|+..+.+|..... . .+++|+|++
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCccccccccceEEEEEE
Confidence 68899999999999999999987 43 38999999999999999987654 48999999987653 2 378999987
Q ss_pred cc
Q 025428 237 KG 238 (253)
Q Consensus 237 ~~ 238 (253)
..
T Consensus 154 d~ 155 (233)
T 4df3_A 154 DV 155 (233)
T ss_dssp CC
T ss_pred ec
Confidence 43
No 210
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.07 E-value=1.4e-10 Score=106.89 Aligned_cols=76 Identities=12% Similarity=0.043 Sum_probs=66.4
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc--CCCceEEEEeccCCC-cC--CCCccEEEEcc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRD--GFSCIKFLVDDVLDT-KL--ERQFQLVMDKG 238 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~--g~~~i~~~~~D~~~~-~~--~~~fD~Vi~~~ 238 (253)
++.+|||+|||+|..+..+++.+. +|+++|+|+.|++.|++|++.+ |+.+++++++|+.+. +. .++||+|+++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDP 171 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDP 171 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECC
Confidence 478999999999999999998865 9999999999999999999988 887899999999885 22 25899999865
Q ss_pred cc
Q 025428 239 TL 240 (253)
Q Consensus 239 ~l 240 (253)
..
T Consensus 172 Pr 173 (410)
T 3ll7_A 172 AR 173 (410)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 211
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.07 E-value=5.5e-10 Score=99.88 Aligned_cols=83 Identities=19% Similarity=0.196 Sum_probs=65.3
Q ss_pred HHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-CC-CcEEEEeCCHHHHHHHHHHHHhcC-----------CCceEEEEec
Q 025428 155 PVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-GF-SDLTGVDYSEDAINLAQSLANRDG-----------FSCIKFLVDD 221 (253)
Q Consensus 155 l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g~-~~v~gvD~s~~~l~~ar~~~~~~g-----------~~~i~~~~~D 221 (253)
++..+ ...++.+|||+|||+|.++..+++. |. .+|+|+|+++.+++.|++++...+ ..+++++++|
T Consensus 97 ~l~~l-~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d 175 (336)
T 2b25_A 97 ILSMM-DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD 175 (336)
T ss_dssp HHHHH-TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred HHHhc-CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence 34444 3467889999999999999999987 54 599999999999999999987532 2479999999
Q ss_pred cCCCc--CC-CCccEEEEcc
Q 025428 222 VLDTK--LE-RQFQLVMDKG 238 (253)
Q Consensus 222 ~~~~~--~~-~~fD~Vi~~~ 238 (253)
+.+.. ++ ++||+|+++.
T Consensus 176 ~~~~~~~~~~~~fD~V~~~~ 195 (336)
T 2b25_A 176 ISGATEDIKSLTFDAVALDM 195 (336)
T ss_dssp TTCCC-------EEEEEECS
T ss_pred hHHcccccCCCCeeEEEECC
Confidence 98873 33 6899999864
No 212
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.06 E-value=8.1e-10 Score=99.28 Aligned_cols=80 Identities=24% Similarity=0.189 Sum_probs=69.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCC------CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGF------SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMD 236 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~------~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~ 236 (253)
.++.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.++...|+ ++.++++|.......++||+|++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANLLVDPVDVVIS 207 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCCCCCCEEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCccccCCccEEEE
Confidence 3567999999999999999987731 4899999999999999999988887 79999999987655588999999
Q ss_pred cccccee
Q 025428 237 KGTLDAI 243 (253)
Q Consensus 237 ~~~l~~i 243 (253)
+..++++
T Consensus 208 NPPfg~~ 214 (344)
T 2f8l_A 208 DLPVGYY 214 (344)
T ss_dssp ECCCSEE
T ss_pred CCCCCCc
Confidence 9998775
No 213
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.05 E-value=3.3e-10 Score=99.19 Aligned_cols=84 Identities=18% Similarity=0.251 Sum_probs=68.1
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC--C
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE--R 229 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~--~ 229 (253)
...+++.+.. .++ +|||||||+|.++..+++.+ .+|+|+|+++.|++.+++++.. .+++++++|+.+++++ .
T Consensus 36 ~~~Iv~~~~~-~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~---~~v~vi~~D~l~~~~~~~~ 109 (271)
T 3fut_A 36 LRRIVEAARP-FTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSG---LPVRLVFQDALLYPWEEVP 109 (271)
T ss_dssp HHHHHHHHCC-CCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTT---SSEEEEESCGGGSCGGGSC
T ss_pred HHHHHHhcCC-CCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCC---CCEEEEECChhhCChhhcc
Confidence 3344444433 456 99999999999999999996 4999999999999999998752 4899999999998765 3
Q ss_pred CccEEEEccccc
Q 025428 230 QFQLVMDKGTLD 241 (253)
Q Consensus 230 ~fD~Vi~~~~l~ 241 (253)
.+|.|++|-.++
T Consensus 110 ~~~~iv~NlPy~ 121 (271)
T 3fut_A 110 QGSLLVANLPYH 121 (271)
T ss_dssp TTEEEEEEECSS
T ss_pred CccEEEecCccc
Confidence 689999876544
No 214
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.05 E-value=8e-10 Score=100.23 Aligned_cols=79 Identities=18% Similarity=0.176 Sum_probs=69.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l 240 (253)
.+..+|||||||+|.++..+++.. ..+++++|+ +.+++.|++++...++. +++++.+|+.+ +++..||+|++..+|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~p~~~D~v~~~~vl 278 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-TIPDGADVYLIKHVL 278 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-CCCSSCSEEEEESCG
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-CCCCCceEEEhhhhh
Confidence 456899999999999999999882 338999999 99999999999888864 69999999983 455589999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
|++
T Consensus 279 h~~ 281 (369)
T 3gwz_A 279 HDW 281 (369)
T ss_dssp GGS
T ss_pred ccC
Confidence 986
No 215
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.05 E-value=5.9e-10 Score=104.90 Aligned_cols=89 Identities=12% Similarity=0.092 Sum_probs=73.4
Q ss_pred cccchHHHHhccCC--CCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC
Q 025428 150 DLKSEPVEENDKYL--SSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT 225 (253)
Q Consensus 150 ~~~~~l~~~l~~~~--~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~ 225 (253)
+..+.+...+.... ++.+|||+|||+|..+..++.. + ...|+++|+|+.+++.+++++++.|+.++.++++|+.++
T Consensus 101 d~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~ 180 (479)
T 2frx_A 101 EASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVF 180 (479)
T ss_dssp CHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTH
T ss_pred CHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHh
Confidence 33444444444445 7889999999999999999987 2 348999999999999999999999998999999999987
Q ss_pred c--CCCCccEEEEcc
Q 025428 226 K--LERQFQLVMDKG 238 (253)
Q Consensus 226 ~--~~~~fD~Vi~~~ 238 (253)
+ .+++||+|+++.
T Consensus 181 ~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 181 GAAVPEMFDAILLDA 195 (479)
T ss_dssp HHHSTTCEEEEEEEC
T ss_pred hhhccccCCEEEECC
Confidence 5 357899999854
No 216
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.05 E-value=1.2e-09 Score=93.45 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=61.6
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc----CCCCccEEE
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK----LERQFQLVM 235 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~----~~~~fD~Vi 235 (253)
+.++.+|||+|||+|.++..+++. + ..+|+|+|+|+.|++...+.++.. .|+.++++|+.... +.++||+|+
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceEEEE
Confidence 357899999999999999999987 3 349999999999987665555443 58999999998753 236899999
Q ss_pred Ecccc
Q 025428 236 DKGTL 240 (253)
Q Consensus 236 ~~~~l 240 (253)
++..+
T Consensus 152 ~d~a~ 156 (232)
T 3id6_C 152 VDIAQ 156 (232)
T ss_dssp ECCCC
T ss_pred ecCCC
Confidence 87653
No 217
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.04 E-value=3.4e-10 Score=104.00 Aligned_cols=81 Identities=21% Similarity=0.205 Sum_probs=66.6
Q ss_pred HHhccCC-CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc--CCCCccE
Q 025428 157 EENDKYL-SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK--LERQFQL 233 (253)
Q Consensus 157 ~~l~~~~-~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~--~~~~fD~ 233 (253)
..+.... ++.+|||+|||||.++..++..|+. |+++|+|+.|++.|++|++.+++. .++.++|+.+.. ..+.||+
T Consensus 206 ~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~l~~~~~~fD~ 283 (393)
T 4dmg_A 206 RLFEAMVRPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPTLRGLEGPFHH 283 (393)
T ss_dssp HHHHTTCCTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHHHHTCCCCEEE
T ss_pred HHHHHHhcCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHHHHHhcCCCCE
Confidence 3333443 4889999999999999999999874 999999999999999999999985 467799998753 2445999
Q ss_pred EEEccc
Q 025428 234 VMDKGT 239 (253)
Q Consensus 234 Vi~~~~ 239 (253)
|+++..
T Consensus 284 Ii~dpP 289 (393)
T 4dmg_A 284 VLLDPP 289 (393)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998654
No 218
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.04 E-value=2.2e-10 Score=97.32 Aligned_cols=88 Identities=17% Similarity=0.201 Sum_probs=69.6
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCC---
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDT--- 225 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~--- 225 (253)
...++..+....++.+|||||||+|..+..+++. + ..+|+++|+|+.+++.|+++++..|+. +++++++|+.+.
T Consensus 60 ~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~ 139 (232)
T 3cbg_A 60 QAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQ 139 (232)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHH
Confidence 3444444444446789999999999999999987 2 348999999999999999999888886 599999998653
Q ss_pred -cC-C--CCccEEEEccc
Q 025428 226 -KL-E--RQFQLVMDKGT 239 (253)
Q Consensus 226 -~~-~--~~fD~Vi~~~~ 239 (253)
+. + ++||+|++...
T Consensus 140 l~~~~~~~~fD~V~~d~~ 157 (232)
T 3cbg_A 140 LTQGKPLPEFDLIFIDAD 157 (232)
T ss_dssp HHTSSSCCCEEEEEECSC
T ss_pred HHhcCCCCCcCEEEECCC
Confidence 11 1 68999998754
No 219
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.03 E-value=3.3e-10 Score=100.83 Aligned_cols=76 Identities=14% Similarity=0.190 Sum_probs=67.0
Q ss_pred CEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEcccccee
Q 025428 166 WSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTLDAI 243 (253)
Q Consensus 166 ~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l~~i 243 (253)
.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++++...++. +++++.+|+.+ +++++||+|++..++|++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~D~v~~~~vl~~~ 246 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVPSNGDIYLLSRIIGDL 246 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCCSSCSEEEEESCGGGC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCCCCCCEEEEchhccCC
Confidence 89999999999999999987 2348999999 99999999998776653 69999999988 466789999999999976
No 220
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.02 E-value=3.2e-10 Score=106.07 Aligned_cols=90 Identities=14% Similarity=0.052 Sum_probs=76.0
Q ss_pred cccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc--CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc-
Q 025428 150 DLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ--GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK- 226 (253)
Q Consensus 150 ~~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~--g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~- 226 (253)
+..+.++..+....++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.+++|+++.|+.++.++++|+.++.
T Consensus 91 d~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~ 170 (456)
T 3m4x_A 91 EPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVP 170 (456)
T ss_dssp CTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhh
Confidence 444555555556678899999999999999999986 33489999999999999999999999989999999998875
Q ss_pred -CCCCccEEEEccc
Q 025428 227 -LERQFQLVMDKGT 239 (253)
Q Consensus 227 -~~~~fD~Vi~~~~ 239 (253)
++++||+|+++..
T Consensus 171 ~~~~~FD~Il~DaP 184 (456)
T 3m4x_A 171 HFSGFFDRIVVDAP 184 (456)
T ss_dssp HHTTCEEEEEEECC
T ss_pred hccccCCEEEECCC
Confidence 3589999998654
No 221
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.01 E-value=5.6e-10 Score=98.70 Aligned_cols=78 Identities=19% Similarity=0.333 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEEeccCCCcC--CCCccEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRD-----GFSCIKFLVDDVLDTKL--ERQFQLV 234 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~-----g~~~i~~~~~D~~~~~~--~~~fD~V 234 (253)
....+|||||||+|.++..++++ +..+|+++|+|+.|++.|++++... .-.+++++++|+.+... .++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 35689999999999999999998 4568999999999999999998653 12479999999987642 4789999
Q ss_pred EEcccc
Q 025428 235 MDKGTL 240 (253)
Q Consensus 235 i~~~~l 240 (253)
+++...
T Consensus 162 i~D~~~ 167 (294)
T 3adn_A 162 ISDCTD 167 (294)
T ss_dssp EECC--
T ss_pred EECCCC
Confidence 996543
No 222
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.01 E-value=1.4e-09 Score=101.48 Aligned_cols=86 Identities=15% Similarity=0.117 Sum_probs=72.3
Q ss_pred chHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-CC-CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc--CC
Q 025428 153 SEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-GF-SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK--LE 228 (253)
Q Consensus 153 ~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g~-~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~--~~ 228 (253)
+.+...+....++.+|||+|||+|..+..++.. +. .+|+++|+|+.+++.+++++++.|+.+++++++|+.+++ ++
T Consensus 248 s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~ 327 (450)
T 2yxl_A 248 SAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIG 327 (450)
T ss_dssp HHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSC
T ss_pred hHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhc
Confidence 344444445567889999999999999999986 22 589999999999999999999999989999999999876 44
Q ss_pred -CCccEEEEcc
Q 025428 229 -RQFQLVMDKG 238 (253)
Q Consensus 229 -~~fD~Vi~~~ 238 (253)
++||+|+++.
T Consensus 328 ~~~fD~Vl~D~ 338 (450)
T 2yxl_A 328 EEVADKVLLDA 338 (450)
T ss_dssp SSCEEEEEEEC
T ss_pred cCCCCEEEEcC
Confidence 7899999753
No 223
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.00 E-value=1e-09 Score=94.20 Aligned_cols=73 Identities=15% Similarity=0.268 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC--CCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE--RQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~--~~fD~Vi~~~~ 239 (253)
.++.+|||||||+|.++..+++++ .+|+|+|+|+.|++.+++++.. ..+++++++|+.+++++ ..| .|+++..
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~~~~~~~~-~vv~nlP 103 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFKFPKNQSY-KIFGNIP 103 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCCCCSSCCC-EEEEECC
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCCcccCCCe-EEEEeCC
Confidence 467899999999999999999996 5999999999999999998754 25899999999998765 345 4666543
No 224
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.00 E-value=3.5e-10 Score=89.90 Aligned_cols=71 Identities=21% Similarity=0.264 Sum_probs=59.9
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhc-CC-CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc--------CC-CC
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQ-GF-SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK--------LE-RQ 230 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~-g~-~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~--------~~-~~ 230 (253)
..++.+|||+|||+|.++..+++. |. .+++|+|+++ |++. .+++++++|+.+.+ ++ ++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSK 88 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCc
Confidence 356789999999999999999988 43 5999999999 7642 47899999999875 44 78
Q ss_pred ccEEEEcccccee
Q 025428 231 FQLVMDKGTLDAI 243 (253)
Q Consensus 231 fD~Vi~~~~l~~i 243 (253)
||+|+++.++++.
T Consensus 89 ~D~i~~~~~~~~~ 101 (180)
T 1ej0_A 89 VQVVMSDMAPNMS 101 (180)
T ss_dssp EEEEEECCCCCCC
T ss_pred eeEEEECCCcccc
Confidence 9999999888765
No 225
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.00 E-value=8.7e-11 Score=107.89 Aligned_cols=77 Identities=18% Similarity=0.226 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCc--eEEEEeccCCCcCC-CCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSC--IKFLVDDVLDTKLE-RQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~--i~~~~~D~~~~~~~-~~fD~Vi~~~~ 239 (253)
.++.+|||||||+|.++..+++.|. +|+|+|+|+.|++.|+++ ++.. ..+...+...++++ ++||+|++..+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~v 180 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRTEGPANVIYAANT 180 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHHHCCEEEEEEESC
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccCCCCEEEEEECCh
Confidence 4677999999999999999999977 999999999999999876 3322 12334445445544 89999999999
Q ss_pred cceec
Q 025428 240 LDAIG 244 (253)
Q Consensus 240 l~~i~ 244 (253)
|||+.
T Consensus 181 l~h~~ 185 (416)
T 4e2x_A 181 LCHIP 185 (416)
T ss_dssp GGGCT
T ss_pred HHhcC
Confidence 99983
No 226
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.99 E-value=6.2e-10 Score=104.29 Aligned_cols=89 Identities=13% Similarity=0.046 Sum_probs=74.0
Q ss_pred cccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc--CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc-
Q 025428 150 DLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ--GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK- 226 (253)
Q Consensus 150 ~~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~--g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~- 226 (253)
+..+.++..+....++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.+++++++.|+. +.++++|+.+++
T Consensus 87 d~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~ 165 (464)
T 3m6w_A 87 EPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAE 165 (464)
T ss_dssp CTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHH
T ss_pred CHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhh
Confidence 344455555555678899999999999999999977 2248999999999999999999999997 999999998875
Q ss_pred -CCCCccEEEEccc
Q 025428 227 -LERQFQLVMDKGT 239 (253)
Q Consensus 227 -~~~~fD~Vi~~~~ 239 (253)
.+++||+|+++..
T Consensus 166 ~~~~~FD~Il~D~P 179 (464)
T 3m6w_A 166 AFGTYFHRVLLDAP 179 (464)
T ss_dssp HHCSCEEEEEEECC
T ss_pred hccccCCEEEECCC
Confidence 3588999997543
No 227
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.97 E-value=1.2e-09 Score=89.77 Aligned_cols=70 Identities=16% Similarity=0.292 Sum_probs=57.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-C--CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc-------------
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-G--FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK------------- 226 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g--~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~------------- 226 (253)
.++.+|||+|||+|.++..++++ + ..+|+|+|+|+.+ ...+++++++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~ 89 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNM 89 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC---------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhccccccccc
Confidence 46779999999999999999987 3 3589999999931 2357899999998876
Q ss_pred ------------CC-CCccEEEEcccccee
Q 025428 227 ------------LE-RQFQLVMDKGTLDAI 243 (253)
Q Consensus 227 ------------~~-~~fD~Vi~~~~l~~i 243 (253)
++ ++||+|+++..+|+.
T Consensus 90 ~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~ 119 (201)
T 2plw_A 90 NNNSVDYKLKEILQDKKIDIILSDAAVPCI 119 (201)
T ss_dssp --CHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred cchhhHHHHHhhcCCCcccEEEeCCCcCCC
Confidence 34 689999999887764
No 228
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.97 E-value=6.2e-10 Score=96.13 Aligned_cols=73 Identities=15% Similarity=0.251 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCC---CccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLER---QFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~---~fD~Vi~~~~ 239 (253)
.++.+|||||||+|.++..+++.|..+|+|+|+++.|++.++++ +..+++++++|+.+++++. .| .|+.+..
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~~~~~~~~~-~vv~NlP 104 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFPFCSLGKEL-KVVGNLP 104 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCCGGGSCSSE-EEEEECC
T ss_pred CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCChhHccCCc-EEEEECc
Confidence 46789999999999999999999656999999999999999887 2247999999999987653 33 5666543
Q ss_pred c
Q 025428 240 L 240 (253)
Q Consensus 240 l 240 (253)
+
T Consensus 105 y 105 (249)
T 3ftd_A 105 Y 105 (249)
T ss_dssp T
T ss_pred h
Confidence 3
No 229
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.97 E-value=7.3e-10 Score=97.03 Aligned_cols=82 Identities=21% Similarity=0.178 Sum_probs=61.1
Q ss_pred CCCEEEEEcCCC--cHHHHHHHh-c-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-------CCCcc
Q 025428 164 SSWSVLDIGTGN--GLLLQELSK-Q-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-------ERQFQ 232 (253)
Q Consensus 164 ~~~~VLDiGcGt--G~~~~~la~-~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-------~~~fD 232 (253)
...+|||||||+ +..+..++. . +..+|+++|.|+.||+.|++++...+..+++|+++|+.++.. .+.||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 446899999997 333344433 2 334999999999999999999865543479999999988521 24455
Q ss_pred -----EEEEccccceecc
Q 025428 233 -----LVMDKGTLDAIGL 245 (253)
Q Consensus 233 -----~Vi~~~~l~~i~~ 245 (253)
.|+++.+|||+.-
T Consensus 158 ~~~p~av~~~avLH~l~d 175 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLD 175 (277)
T ss_dssp TTSCCEEEEESCGGGSCG
T ss_pred cCCcchHHhhhhHhcCCc
Confidence 6889999999843
No 230
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.96 E-value=1e-09 Score=96.45 Aligned_cols=79 Identities=15% Similarity=0.103 Sum_probs=62.0
Q ss_pred hHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCc----EEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCC
Q 025428 154 EPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSD----LTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLER 229 (253)
Q Consensus 154 ~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~----v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~ 229 (253)
.+++.+.. .++.+|||||||+|.++..+++.+. + |+|+|+++.|++.++++. ..+++++++|+.+++++.
T Consensus 33 ~iv~~~~~-~~~~~VLEIG~G~G~lt~~La~~~~-~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 33 AIVAAIRP-ERGERMVEIGPGLGALTGPVIARLA-TPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHHHHCC-CTTCEEEEECCTTSTTHHHHHHHHC-BTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCGGG
T ss_pred HHHHhcCC-CCcCEEEEEccccHHHHHHHHHhCC-CcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCChhH
Confidence 34444432 4678999999999999999999854 5 999999999999999983 248999999999987643
Q ss_pred C-------ccEEEEcc
Q 025428 230 Q-------FQLVMDKG 238 (253)
Q Consensus 230 ~-------fD~Vi~~~ 238 (253)
. ...|+.|-
T Consensus 107 ~~~~~~~~~~~vv~Nl 122 (279)
T 3uzu_A 107 IARPGDEPSLRIIGNL 122 (279)
T ss_dssp GSCSSSSCCEEEEEEC
T ss_pred hcccccCCceEEEEcc
Confidence 2 23566655
No 231
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.95 E-value=1.1e-09 Score=97.03 Aligned_cols=79 Identities=19% Similarity=0.158 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHh----cCCCceEEEEeccCCCcC---CCCccEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANR----DGFSCIKFLVDDVLDTKL---ERQFQLV 234 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~----~g~~~i~~~~~D~~~~~~---~~~fD~V 234 (253)
.++.+|||||||+|.++..++++ +..+|+++|+|+.+++.|++++.. ..-.+++++++|+.+... +++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 35679999999999999999988 455999999999999999998742 122479999999987652 4789999
Q ss_pred EEccccc
Q 025428 235 MDKGTLD 241 (253)
Q Consensus 235 i~~~~l~ 241 (253)
+++...+
T Consensus 174 i~d~~~~ 180 (304)
T 3bwc_A 174 IIDTTDP 180 (304)
T ss_dssp EEECC--
T ss_pred EECCCCc
Confidence 9976554
No 232
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.94 E-value=1.1e-09 Score=95.97 Aligned_cols=77 Identities=23% Similarity=0.350 Sum_probs=63.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc--C---------CCceEEEEeccCCCcC-CCC
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRD--G---------FSCIKFLVDDVLDTKL-ERQ 230 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~--g---------~~~i~~~~~D~~~~~~-~~~ 230 (253)
..+.+|||||||+|.++..+++++..+|+++|+++.+++.|++++ .. + -.+++++++|+.+... +++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 356799999999999999999986669999999999999999987 33 2 2479999999866421 578
Q ss_pred ccEEEEcccc
Q 025428 231 FQLVMDKGTL 240 (253)
Q Consensus 231 fD~Vi~~~~l 240 (253)
||+|+++...
T Consensus 153 fD~Ii~d~~~ 162 (281)
T 1mjf_A 153 FDVIIADSTD 162 (281)
T ss_dssp EEEEEEECCC
T ss_pred eeEEEECCCC
Confidence 9999986653
No 233
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.93 E-value=1.9e-09 Score=94.27 Aligned_cols=77 Identities=23% Similarity=0.320 Sum_probs=64.1
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHh--cCC--CceEEEEeccCCCc--CCCCccEEEE
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANR--DGF--SCIKFLVDDVLDTK--LERQFQLVMD 236 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~--~g~--~~i~~~~~D~~~~~--~~~~fD~Vi~ 236 (253)
...+|||||||+|.++..++++ +..+|+++|+++.+++.|++++.. .++ ++++++++|+.+.. .+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 5679999999999999999988 667999999999999999998754 133 47999999987642 2478999999
Q ss_pred cccc
Q 025428 237 KGTL 240 (253)
Q Consensus 237 ~~~l 240 (253)
+...
T Consensus 155 d~~~ 158 (275)
T 1iy9_A 155 DSTE 158 (275)
T ss_dssp SCSS
T ss_pred CCCC
Confidence 6554
No 234
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.92 E-value=2e-09 Score=96.85 Aligned_cols=77 Identities=16% Similarity=0.337 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhc--CC--CceEEEEeccCCCc--C-CCCccEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRD--GF--SCIKFLVDDVLDTK--L-ERQFQLV 234 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~--g~--~~i~~~~~D~~~~~--~-~~~fD~V 234 (253)
....+|||||||+|.++..++++ +..+|+++|+|+.|++.|++++... ++ .+++++++|+.+.. . +++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 45689999999999999999988 3459999999999999999998652 33 47999999987642 2 3789999
Q ss_pred EEccc
Q 025428 235 MDKGT 239 (253)
Q Consensus 235 i~~~~ 239 (253)
+++..
T Consensus 199 i~d~~ 203 (334)
T 1xj5_A 199 IVDSS 203 (334)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 98654
No 235
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.92 E-value=1.4e-09 Score=96.89 Aligned_cols=79 Identities=22% Similarity=0.271 Sum_probs=65.2
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHh--cC---CCceEEEEeccCCC-c-CCCCccEEE
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANR--DG---FSCIKFLVDDVLDT-K-LERQFQLVM 235 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~--~g---~~~i~~~~~D~~~~-~-~~~~fD~Vi 235 (253)
...+|||||||+|.++..++++ +..+|+++|+++.+++.|++++.. .+ -.+++++++|+.+. + .+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 5579999999999999999988 456999999999999999998764 22 24799999999874 2 247899999
Q ss_pred Eccccce
Q 025428 236 DKGTLDA 242 (253)
Q Consensus 236 ~~~~l~~ 242 (253)
++...+.
T Consensus 157 ~d~~~~~ 163 (314)
T 1uir_A 157 IDLTDPV 163 (314)
T ss_dssp EECCCCB
T ss_pred ECCCCcc
Confidence 9765543
No 236
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.92 E-value=9e-10 Score=97.27 Aligned_cols=76 Identities=9% Similarity=0.095 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceE-EEEeccCCCc---CC-CCccEEEEc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIK-FLVDDVLDTK---LE-RQFQLVMDK 237 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~-~~~~D~~~~~---~~-~~fD~Vi~~ 237 (253)
.++.+|||+|||||.++..++++|+.+|+|+|+|++||+.+.++. .++. +...|+..+. ++ .+||+|++.
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~-----~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d 158 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD-----DRVRSMEQYNFRYAEPVDFTEGLPSFASID 158 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC-----TTEEEECSCCGGGCCGGGCTTCCCSEEEEC
T ss_pred ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----cccceecccCceecchhhCCCCCCCEEEEE
Confidence 467799999999999999999998889999999999999865421 1222 2233444433 23 459999998
Q ss_pred ccccee
Q 025428 238 GTLDAI 243 (253)
Q Consensus 238 ~~l~~i 243 (253)
.+|+++
T Consensus 159 ~sf~sl 164 (291)
T 3hp7_A 159 VSFISL 164 (291)
T ss_dssp CSSSCG
T ss_pred eeHhhH
Confidence 888754
No 237
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.92 E-value=2.3e-09 Score=88.72 Aligned_cols=66 Identities=17% Similarity=0.294 Sum_probs=54.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC--------C----CC
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL--------E----RQ 230 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~--------~----~~ 230 (253)
.++.+|||+|||+|.++..++++ ..+|+|+|+++. ..+.+++++++|+.+... . ++
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~-----------~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEM-----------EEIAGVRFIRCDIFKETIFDDIDRALREEGIEK 91 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCC-----------CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSS
T ss_pred CCCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccc-----------ccCCCeEEEEccccCHHHHHHHHHHhhcccCCc
Confidence 57789999999999999999999 449999999984 133579999999988642 1 48
Q ss_pred ccEEEEcccc
Q 025428 231 FQLVMDKGTL 240 (253)
Q Consensus 231 fD~Vi~~~~l 240 (253)
||+|+++...
T Consensus 92 ~D~Vlsd~~~ 101 (191)
T 3dou_A 92 VDDVVSDAMA 101 (191)
T ss_dssp EEEEEECCCC
T ss_pred ceEEecCCCc
Confidence 9999997644
No 238
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.91 E-value=1.3e-09 Score=99.59 Aligned_cols=75 Identities=21% Similarity=0.127 Sum_probs=65.8
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhc---------------CCCceEEEEeccCCCcC
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRD---------------GFSCIKFLVDDVLDTKL 227 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~---------------g~~~i~~~~~D~~~~~~ 227 (253)
++.+|||+|||+|.+++.++.. +..+|+++|+++.+++.+++|++.+ ++.+++++++|+.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 6789999999999999999998 5568999999999999999999998 88779999999977632
Q ss_pred --CCCccEEEEcc
Q 025428 228 --ERQFQLVMDKG 238 (253)
Q Consensus 228 --~~~fD~Vi~~~ 238 (253)
.++||+|+.+.
T Consensus 127 ~~~~~fD~I~lDP 139 (378)
T 2dul_A 127 ERHRYFHFIDLDP 139 (378)
T ss_dssp HSTTCEEEEEECC
T ss_pred hccCCCCEEEeCC
Confidence 36799999754
No 239
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.91 E-value=1.9e-09 Score=95.25 Aligned_cols=76 Identities=20% Similarity=0.313 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHh--cCC--CceEEEEeccCCC-c-CCCCccEEEE
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANR--DGF--SCIKFLVDDVLDT-K-LERQFQLVMD 236 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~--~g~--~~i~~~~~D~~~~-~-~~~~fD~Vi~ 236 (253)
.+.+|||||||+|.++..++++ +..+|+++|+|+.+++.|++++.. .++ .+++++++|+.+. + .+++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4579999999999999999998 556999999999999999998754 222 4799999998764 2 2478999998
Q ss_pred ccc
Q 025428 237 KGT 239 (253)
Q Consensus 237 ~~~ 239 (253)
+..
T Consensus 170 d~~ 172 (296)
T 1inl_A 170 DST 172 (296)
T ss_dssp EC-
T ss_pred cCC
Confidence 643
No 240
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.91 E-value=2.3e-09 Score=99.78 Aligned_cols=93 Identities=17% Similarity=0.148 Sum_probs=75.7
Q ss_pred cccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc--------------CCCcEEEEeCCHHHHHHHHHHHHhcCCC--
Q 025428 150 DLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ--------------GFSDLTGVDYSEDAINLAQSLANRDGFS-- 213 (253)
Q Consensus 150 ~~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~--------------g~~~v~gvD~s~~~l~~ar~~~~~~g~~-- 213 (253)
.+...+++.+. +.++.+|||+|||+|.++..+++. ...+++|+|+++.+++.|+.++...|+.
T Consensus 158 ~v~~~mv~~l~-~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~ 236 (445)
T 2okc_A 158 PLIQAMVDCIN-PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTD 236 (445)
T ss_dssp HHHHHHHHHHC-CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHHhC-CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcC
Confidence 44445555553 346779999999999999988864 1248999999999999999999888875
Q ss_pred ceEEEEeccCCCcCCCCccEEEEcccccee
Q 025428 214 CIKFLVDDVLDTKLERQFQLVMDKGTLDAI 243 (253)
Q Consensus 214 ~i~~~~~D~~~~~~~~~fD~Vi~~~~l~~i 243 (253)
++.++++|....+...+||+|+++..+...
T Consensus 237 ~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~ 266 (445)
T 2okc_A 237 RSPIVCEDSLEKEPSTLVDVILANPPFGTR 266 (445)
T ss_dssp CCSEEECCTTTSCCSSCEEEEEECCCSSCC
T ss_pred CCCEeeCCCCCCcccCCcCEEEECCCCCCc
Confidence 688999999887666789999999888764
No 241
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.90 E-value=1.4e-09 Score=97.19 Aligned_cols=76 Identities=16% Similarity=0.354 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHh--cCC--CceEEEEeccCCCc--CCCCccEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANR--DGF--SCIKFLVDDVLDTK--LERQFQLVM 235 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~--~g~--~~i~~~~~D~~~~~--~~~~fD~Vi 235 (253)
..+.+|||||||+|.++..++++ +..+|+++|+|+.+++.|++++.. .++ .+++++++|+.+.. .+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 35679999999999999999988 456999999999999999999865 223 47999999987642 247899999
Q ss_pred Ecc
Q 025428 236 DKG 238 (253)
Q Consensus 236 ~~~ 238 (253)
++.
T Consensus 195 ~d~ 197 (321)
T 2pt6_A 195 VDS 197 (321)
T ss_dssp EEC
T ss_pred ECC
Confidence 865
No 242
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.89 E-value=2.2e-09 Score=95.22 Aligned_cols=78 Identities=23% Similarity=0.392 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHh--cCC--CceEEEEeccCCC-c-CCCCccEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANR--DGF--SCIKFLVDDVLDT-K-LERQFQLVM 235 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~--~g~--~~i~~~~~D~~~~-~-~~~~fD~Vi 235 (253)
....+|||||||+|.++..++++ +..+|+++|+++.+++.|++++.. .++ .+++++++|+.+. + .+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 35679999999999999999988 346999999999999999998765 233 4799999998763 2 247899999
Q ss_pred Ecccc
Q 025428 236 DKGTL 240 (253)
Q Consensus 236 ~~~~l 240 (253)
++...
T Consensus 174 ~d~~~ 178 (304)
T 2o07_A 174 TDSSD 178 (304)
T ss_dssp EECC-
T ss_pred ECCCC
Confidence 86543
No 243
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.89 E-value=7.3e-10 Score=94.63 Aligned_cols=71 Identities=17% Similarity=0.179 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-----CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC---cC-C-CCccE
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-----GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT---KL-E-RQFQL 233 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-----g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~---~~-~-~~fD~ 233 (253)
++.+|||||||+|..+..+++. ...+|+|+|+|+.|++.|+. .. .+++++++|+.+. +. . .+||+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~~-~~v~~~~gD~~~~~~l~~~~~~~fD~ 155 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----DM-ENITLHQGDCSDLTTFEHLREMAHPL 155 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----GC-TTEEEEECCSSCSGGGGGGSSSCSSE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----cC-CceEEEECcchhHHHHHhhccCCCCE
Confidence 5679999999999999999986 23499999999999998872 12 4799999999985 42 3 47999
Q ss_pred EEEccc
Q 025428 234 VMDKGT 239 (253)
Q Consensus 234 Vi~~~~ 239 (253)
|++...
T Consensus 156 I~~d~~ 161 (236)
T 2bm8_A 156 IFIDNA 161 (236)
T ss_dssp EEEESS
T ss_pred EEECCc
Confidence 997654
No 244
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.89 E-value=1.7e-10 Score=98.59 Aligned_cols=45 Identities=16% Similarity=0.254 Sum_probs=40.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHH
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLA 207 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~ 207 (253)
.++.+|||||||||.++..+++.|+.+|+|+|+|+.|++.++++.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTC
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhC
Confidence 456799999999999999999998679999999999999987754
No 245
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.89 E-value=2.3e-09 Score=95.71 Aligned_cols=75 Identities=13% Similarity=0.120 Sum_probs=62.2
Q ss_pred CEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc--C-CCCccEEEEcccc
Q 025428 166 WSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK--L-ERQFQLVMDKGTL 240 (253)
Q Consensus 166 ~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~--~-~~~fD~Vi~~~~l 240 (253)
.+|||||||+|.++..++++ +..+|++||+++.|++.|++++....-.+++++++|+.++. . +++||+|+++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 49999999999999999984 33489999999999999999976544357999999998753 2 3789999986543
No 246
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.88 E-value=1.4e-09 Score=90.46 Aligned_cols=69 Identities=17% Similarity=0.136 Sum_probs=56.7
Q ss_pred HHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccE
Q 025428 155 PVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQL 233 (253)
Q Consensus 155 l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~ 233 (253)
+++.+....++.+|||||||+|.++..++ .+++|+|+|+. +++++++|+.+++++ ++||+
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~ 118 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR----NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDV 118 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEE
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeE
Confidence 44555444567899999999999998883 48999999996 567899999998765 78999
Q ss_pred EEEccccce
Q 025428 234 VMDKGTLDA 242 (253)
Q Consensus 234 Vi~~~~l~~ 242 (253)
|++..++|+
T Consensus 119 v~~~~~l~~ 127 (215)
T 2zfu_A 119 AVFCLSLMG 127 (215)
T ss_dssp EEEESCCCS
T ss_pred EEEehhccc
Confidence 999999873
No 247
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.87 E-value=5.9e-09 Score=96.54 Aligned_cols=83 Identities=13% Similarity=0.049 Sum_probs=70.0
Q ss_pred HHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCC-CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc--CC-CC
Q 025428 155 PVEENDKYLSSWSVLDIGTGNGLLLQELSKQGF-SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK--LE-RQ 230 (253)
Q Consensus 155 l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~-~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~--~~-~~ 230 (253)
+...+....++.+|||+|||+|..+..++..+. .+|+++|+++.+++.+++++++.|+ +++++++|+.+++ ++ ++
T Consensus 237 ~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~~~D~~~~~~~~~~~~ 315 (429)
T 1sqg_A 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCGEQQ 315 (429)
T ss_dssp THHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEEECCTTCTHHHHTTCC
T ss_pred HHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-CeEEEeCchhhchhhcccCC
Confidence 333344456788999999999999999998842 5999999999999999999999987 6899999999876 34 68
Q ss_pred ccEEEEcc
Q 025428 231 FQLVMDKG 238 (253)
Q Consensus 231 fD~Vi~~~ 238 (253)
||+|+++.
T Consensus 316 fD~Vl~D~ 323 (429)
T 1sqg_A 316 FDRILLDA 323 (429)
T ss_dssp EEEEEEEC
T ss_pred CCEEEEeC
Confidence 99999854
No 248
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.87 E-value=1.5e-10 Score=99.21 Aligned_cols=72 Identities=19% Similarity=0.355 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC--CCccEEEEcc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE--RQFQLVMDKG 238 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~--~~fD~Vi~~~ 238 (253)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.+++++. +..+++++++|+.+++++ ++| .|+++.
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~ 101 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFPNKQRY-KIVGNI 101 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCCCSSEE-EEEEEC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcccCCCc-EEEEeC
Confidence 467799999999999999999996 599999999999999988765 335799999999998765 578 677764
No 249
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.86 E-value=3.1e-09 Score=96.29 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
.+..+|||||||+|.++..++++. ..+++++|+ +.|++.|++ ..+++++.+|+.+ +++. ||+|++..+||
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~~-~D~v~~~~~lh 278 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-SVPQ-GDAMILKAVCH 278 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCCC-EEEEEEESSGG
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-CCCC-CCEEEEecccc
Confidence 456899999999999999999884 237899999 999987764 2479999999988 5555 99999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
++
T Consensus 279 ~~ 280 (372)
T 1fp1_D 279 NW 280 (372)
T ss_dssp GS
T ss_pred cC
Confidence 87
No 250
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.86 E-value=2.7e-09 Score=93.57 Aligned_cols=77 Identities=14% Similarity=0.286 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcC----CCceEEEEeccCCCc--CCCCccEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDG----FSCIKFLVDDVLDTK--LERQFQLVM 235 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g----~~~i~~~~~D~~~~~--~~~~fD~Vi 235 (253)
.++.+|||||||+|.++..++++ +..+|+++|+++.+++.|++++...+ -.+++++++|+.+.. .+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 35679999999999999999988 34699999999999999999876432 247999999997743 257899999
Q ss_pred Eccc
Q 025428 236 DKGT 239 (253)
Q Consensus 236 ~~~~ 239 (253)
++..
T Consensus 157 ~d~~ 160 (283)
T 2i7c_A 157 VDSS 160 (283)
T ss_dssp EECC
T ss_pred EcCC
Confidence 8654
No 251
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.86 E-value=5.4e-10 Score=98.01 Aligned_cols=73 Identities=16% Similarity=0.084 Sum_probs=56.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHH-hcCCC-ceEEE--EeccCCCcCCCCccEEEEcc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLAN-RDGFS-CIKFL--VDDVLDTKLERQFQLVMDKG 238 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~-~~g~~-~i~~~--~~D~~~~~~~~~fD~Vi~~~ 238 (253)
.++.+|||+|||+|.++..++++ .+|+|+|+++ |+..++++.. ..... ++.++ ++|+.+++ +++||+|+++.
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~Vvsd~ 156 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME-PFQADTVLCDI 156 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-CCCCSEEEECC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-CCCcCEEEECC
Confidence 46789999999999999999998 4899999999 6543332210 01111 78999 99999875 67899999987
Q ss_pred c
Q 025428 239 T 239 (253)
Q Consensus 239 ~ 239 (253)
.
T Consensus 157 ~ 157 (276)
T 2wa2_A 157 G 157 (276)
T ss_dssp C
T ss_pred C
Confidence 6
No 252
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.86 E-value=6.2e-10 Score=97.03 Aligned_cols=72 Identities=14% Similarity=0.038 Sum_probs=55.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHH---HhcCCCceEEE--EeccCCCcCCCCccEEEEc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLA---NRDGFSCIKFL--VDDVLDTKLERQFQLVMDK 237 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~---~~~g~~~i~~~--~~D~~~~~~~~~fD~Vi~~ 237 (253)
.++.+|||+|||+|.++..++++ .+|+|+|+++ |+..++++. +..+ .++.++ ++|+.+++ +++||+|+++
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~-~~~fD~V~sd 147 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYG-WNIVKFKSRVDIHTLP-VERTDVIMCD 147 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTT-GGGEEEECSCCTTTSC-CCCCSEEEEC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccC-CCeEEEecccCHhHCC-CCCCcEEEEe
Confidence 56789999999999999999998 4899999999 643332211 0111 168999 99999876 6789999998
Q ss_pred cc
Q 025428 238 GT 239 (253)
Q Consensus 238 ~~ 239 (253)
..
T Consensus 148 ~~ 149 (265)
T 2oxt_A 148 VG 149 (265)
T ss_dssp CC
T ss_pred Cc
Confidence 76
No 253
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.85 E-value=2.5e-09 Score=98.13 Aligned_cols=75 Identities=12% Similarity=-0.037 Sum_probs=65.9
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc--CCCcEEEEeCCHHHHHHHHHHHHhcCCCc--eEEEEeccCCCcC---CCCccEEEE
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ--GFSDLTGVDYSEDAINLAQSLANRDGFSC--IKFLVDDVLDTKL---ERQFQLVMD 236 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~--g~~~v~gvD~s~~~l~~ar~~~~~~g~~~--i~~~~~D~~~~~~---~~~fD~Vi~ 236 (253)
++.+|||++||+|.+++.++++ |+.+|+++|+++.+++.+++|++.+|+.+ ++++++|+.++.. .++||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 5679999999999999999985 55699999999999999999999999976 9999999876532 468999998
Q ss_pred cc
Q 025428 237 KG 238 (253)
Q Consensus 237 ~~ 238 (253)
+.
T Consensus 132 DP 133 (392)
T 3axs_A 132 DP 133 (392)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 254
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.85 E-value=3e-09 Score=95.62 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=61.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
.+..+|||||||+|.++..+++. +..+++++|+ +.|++.|++. .+++++.+|+.+ +++. ||+|++..+||
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~-~~p~-~D~v~~~~~lh 257 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS------NNLTYVGGDMFT-SIPN-ADAVLLKYILH 257 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB------TTEEEEECCTTT-CCCC-CSEEEEESCGG
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC------CCcEEEeccccC-CCCC-ccEEEeehhhc
Confidence 35679999999999999999987 3348999999 9999887652 469999999977 4554 99999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
++
T Consensus 258 ~~ 259 (352)
T 1fp2_A 258 NW 259 (352)
T ss_dssp GS
T ss_pred cC
Confidence 87
No 255
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.84 E-value=1.6e-09 Score=93.74 Aligned_cols=80 Identities=15% Similarity=0.091 Sum_probs=61.4
Q ss_pred hHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCc--EEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCC--
Q 025428 154 EPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSD--LTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLER-- 229 (253)
Q Consensus 154 ~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~--v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~-- 229 (253)
.+++.+. ..++.+|||||||+|.++. +.+ + .+ |+|+|+++.|++.+++++... .+++++++|+.+++++.
T Consensus 12 ~iv~~~~-~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~~~~ 85 (252)
T 1qyr_A 12 SIVSAIN-PQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFGELA 85 (252)
T ss_dssp HHHHHHC-CCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHHHHH
T ss_pred HHHHhcC-CCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHHHhh
Confidence 3444443 2467899999999999999 654 4 36 999999999999999886542 48999999999876542
Q ss_pred ----CccEEEEccc
Q 025428 230 ----QFQLVMDKGT 239 (253)
Q Consensus 230 ----~fD~Vi~~~~ 239 (253)
..+.|+++..
T Consensus 86 ~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 86 EKMGQPLRVFGNLP 99 (252)
T ss_dssp HHHTSCEEEEEECC
T ss_pred cccCCceEEEECCC
Confidence 3468887765
No 256
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.84 E-value=3.2e-09 Score=92.20 Aligned_cols=79 Identities=15% Similarity=0.121 Sum_probs=63.0
Q ss_pred CCC--CEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHh-------cC-C-CceEEEEeccCCCc--CCC
Q 025428 163 LSS--WSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANR-------DG-F-SCIKFLVDDVLDTK--LER 229 (253)
Q Consensus 163 ~~~--~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~-------~g-~-~~i~~~~~D~~~~~--~~~ 229 (253)
.++ .+|||+|||+|..++.++..|. +|+++|+++.+++.++++++. ++ + .+++++++|..++. ++.
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~ 163 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITP 163 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSS
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcc
Confidence 345 7999999999999999999977 899999999887777666542 23 4 46999999998742 235
Q ss_pred CccEEEEccccce
Q 025428 230 QFQLVMDKGTLDA 242 (253)
Q Consensus 230 ~fD~Vi~~~~l~~ 242 (253)
+||+|+++..+.+
T Consensus 164 ~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 164 RPQVVYLDPMFPH 176 (258)
T ss_dssp CCSEEEECCCCCC
T ss_pred cCCEEEEcCCCCC
Confidence 7999999877754
No 257
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.82 E-value=3e-09 Score=94.84 Aligned_cols=77 Identities=22% Similarity=0.380 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhc--CC--CceEEEEeccCCCc--CCCCccEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRD--GF--SCIKFLVDDVLDTK--LERQFQLVM 235 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~--g~--~~i~~~~~D~~~~~--~~~~fD~Vi 235 (253)
....+|||||||+|.++..++++ +..+|+++|+++.+++.|++++... ++ .+++++++|+.+.. .+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 35679999999999999999988 4469999999999999999998653 33 47999999997742 247899999
Q ss_pred Eccc
Q 025428 236 DKGT 239 (253)
Q Consensus 236 ~~~~ 239 (253)
++..
T Consensus 187 ~d~~ 190 (314)
T 2b2c_A 187 TDSS 190 (314)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8664
No 258
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.82 E-value=4.5e-09 Score=85.83 Aligned_cols=69 Identities=25% Similarity=0.285 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CC---------CcEEEEeCCHHHHHHHHHHHHhcCCCceEEE-EeccCCCc-----
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GF---------SDLTGVDYSEDAINLAQSLANRDGFSCIKFL-VDDVLDTK----- 226 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~---------~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~-~~D~~~~~----- 226 (253)
.++.+|||+|||+|.++..+++. |. .+|+|+|+|+.+ .+.+++++ ++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~~ 89 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQRI 89 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHHH
Confidence 46789999999999999999988 53 589999999831 23578999 99987753
Q ss_pred ---CC-CCccEEEEccccce
Q 025428 227 ---LE-RQFQLVMDKGTLDA 242 (253)
Q Consensus 227 ---~~-~~fD~Vi~~~~l~~ 242 (253)
++ ++||+|+++..+++
T Consensus 90 ~~~~~~~~fD~V~~~~~~~~ 109 (196)
T 2nyu_A 90 LEVLPGRRADVILSDMAPNA 109 (196)
T ss_dssp HHHSGGGCEEEEEECCCCCC
T ss_pred HHhcCCCCCcEEEeCCCCCC
Confidence 22 58999999776654
No 259
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.78 E-value=3.9e-09 Score=96.65 Aligned_cols=81 Identities=16% Similarity=0.201 Sum_probs=64.0
Q ss_pred cchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc--CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCC
Q 025428 152 KSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ--GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLER 229 (253)
Q Consensus 152 ~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~--g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~ 229 (253)
...+++.+.. .++.+|||+|||+|.++..++++ +..+++|+|+++.+++.| .+++++++|+.+....+
T Consensus 28 ~~~~~~~~~~-~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~~~~ 97 (421)
T 2ih2_A 28 VDFMVSLAEA-PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLWEPGE 97 (421)
T ss_dssp HHHHHHHCCC-CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCCCSS
T ss_pred HHHHHHhhcc-CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcCccC
Confidence 3344444432 34569999999999999999986 345999999999999877 37899999999876668
Q ss_pred CccEEEEccccce
Q 025428 230 QFQLVMDKGTLDA 242 (253)
Q Consensus 230 ~fD~Vi~~~~l~~ 242 (253)
+||+|+++..+..
T Consensus 98 ~fD~Ii~NPPy~~ 110 (421)
T 2ih2_A 98 AFDLILGNPPYGI 110 (421)
T ss_dssp CEEEEEECCCCCC
T ss_pred CCCEEEECcCccC
Confidence 9999999876644
No 260
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.77 E-value=6.8e-09 Score=94.17 Aligned_cols=72 Identities=17% Similarity=0.221 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
.+..+|||||||+|.++..+++. +..+++++|+ +.+++.++++ .+++++.+|+.+ +++.. |+|++..+||
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~-~~p~~-D~v~~~~vlh 272 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF------SGVEHLGGDMFD-GVPKG-DAIFIKWICH 272 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTT-CCCCC-SEEEEESCGG
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc------CCCEEEecCCCC-CCCCC-CEEEEechhh
Confidence 45679999999999999999987 3348999999 8899877642 479999999987 55544 9999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
++
T Consensus 273 ~~ 274 (368)
T 3reo_A 273 DW 274 (368)
T ss_dssp GB
T ss_pred cC
Confidence 86
No 261
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.76 E-value=5.9e-09 Score=90.64 Aligned_cols=71 Identities=13% Similarity=-0.034 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc--C--CCceEEEEeccCCCcCCCCccEEEEc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRD--G--FSCIKFLVDDVLDTKLERQFQLVMDK 237 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~--g--~~~i~~~~~D~~~~~~~~~fD~Vi~~ 237 (253)
...+|||||||+|.++..+++++ .+|+++|+++.|++.|++++... + -++++++.+|..+.. ++||+|+++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCL 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEES
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEEC
Confidence 45799999999999999999886 79999999999999999876431 1 247999999998875 789999986
No 262
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.76 E-value=2.1e-08 Score=90.45 Aligned_cols=79 Identities=19% Similarity=0.121 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLD 241 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~ 241 (253)
....+|||||||+|.++..++++ +..+++..|. +.+++.|+++....+.++|+++.+|+.+.+++ .+|+|++..+||
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~-~~D~~~~~~vlh 255 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP-EADLYILARVLH 255 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC-CCSEEEEESSGG
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC-CceEEEeeeecc
Confidence 35579999999999999999998 3337889997 88999999998766666899999999876544 589999999999
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
..
T Consensus 256 ~~ 257 (353)
T 4a6d_A 256 DW 257 (353)
T ss_dssp GS
T ss_pred cC
Confidence 75
No 263
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.75 E-value=2.8e-08 Score=97.57 Aligned_cols=79 Identities=25% Similarity=0.264 Sum_probs=67.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCC-------------------------------------------CcEEEEeCCHHH
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGF-------------------------------------------SDLTGVDYSEDA 199 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~-------------------------------------------~~v~gvD~s~~~ 199 (253)
.++..|||.+||+|.+++.++..+. .+++|+|+++.|
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 5677999999999999998886521 379999999999
Q ss_pred HHHHHHHHHhcCCCc-eEEEEeccCCCcCC---CCccEEEEccccc
Q 025428 200 INLAQSLANRDGFSC-IKFLVDDVLDTKLE---RQFQLVMDKGTLD 241 (253)
Q Consensus 200 l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~---~~fD~Vi~~~~l~ 241 (253)
++.|++|+...|+.+ ++|.++|+.++..+ ++||+|++|..+.
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG 314 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYG 314 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCcc
Confidence 999999999999985 99999999987433 3899999987653
No 264
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.75 E-value=1e-08 Score=92.97 Aligned_cols=73 Identities=14% Similarity=0.210 Sum_probs=61.1
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEcccc
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTL 240 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l 240 (253)
..+..+|||||||+|.++..+++. +..+++++|+ +.+++.|+++ .+++++.+|+.+ +++.. |+|++..+|
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~D~~~-~~p~~-D~v~~~~vl 269 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF------PGVTHVGGDMFK-EVPSG-DTILMKWIL 269 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTT-CCCCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc------CCeEEEeCCcCC-CCCCC-CEEEehHHh
Confidence 345689999999999999999987 3348999999 8898877642 479999999988 56644 999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
|++
T Consensus 270 h~~ 272 (364)
T 3p9c_A 270 HDW 272 (364)
T ss_dssp GGS
T ss_pred ccC
Confidence 976
No 265
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.73 E-value=7.3e-09 Score=93.03 Aligned_cols=76 Identities=16% Similarity=0.165 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcCCCCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKLERQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~~~~fD~Vi~~~~l 240 (253)
.++.+|||||||+|.++..+++.. ..+++++|++ .++. +++.+..++. +++++.+|+.+ +.+ +||+|++..+|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~-~~p-~~D~v~~~~vl 257 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLR-EVP-HADVHVLKRIL 257 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTT-CCC-CCSEEEEESCG
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCC-CCC-CCcEEEEehhc
Confidence 456799999999999999999873 3389999994 4555 4333333433 69999999973 345 89999999999
Q ss_pred cee
Q 025428 241 DAI 243 (253)
Q Consensus 241 ~~i 243 (253)
|++
T Consensus 258 h~~ 260 (348)
T 3lst_A 258 HNW 260 (348)
T ss_dssp GGS
T ss_pred cCC
Confidence 986
No 266
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.71 E-value=1.3e-08 Score=91.56 Aligned_cols=71 Identities=17% Similarity=0.164 Sum_probs=60.1
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcC-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEccccce
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQG-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKGTLDA 242 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~~l~~ 242 (253)
+..+|||||||+|.++..++++. ..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|+++.+||+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~-~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SIP-SADAVLLKWVLHD 263 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CCC-CCSEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CCC-CceEEEEcccccC
Confidence 56799999999999999999883 338999999 789887664 2469999999988 555 4999999999998
Q ss_pred e
Q 025428 243 I 243 (253)
Q Consensus 243 i 243 (253)
+
T Consensus 264 ~ 264 (358)
T 1zg3_A 264 W 264 (358)
T ss_dssp S
T ss_pred C
Confidence 6
No 267
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.69 E-value=5.2e-09 Score=92.92 Aligned_cols=74 Identities=12% Similarity=0.093 Sum_probs=56.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeC----CHHHHHHHHHHHHhcCCCceEEEEe-ccCCCcCCCCccEEEEc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDY----SEDAINLAQSLANRDGFSCIKFLVD-DVLDTKLERQFQLVMDK 237 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~----s~~~l~~ar~~~~~~g~~~i~~~~~-D~~~~~~~~~fD~Vi~~ 237 (253)
.++.+|||+|||+|.++..++++ .+|+|+|+ ++.+++..+ .+..+..++.++++ |+..++ .++||+|+++
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~-~~~fD~V~sd 155 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIP-PERCDTLLCD 155 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSC-CCCCSEEEEC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCC-cCCCCEEEEC
Confidence 46789999999999999999998 38999999 565542211 11123357999999 998874 4689999998
Q ss_pred cccc
Q 025428 238 GTLD 241 (253)
Q Consensus 238 ~~l~ 241 (253)
..++
T Consensus 156 ~~~~ 159 (305)
T 2p41_A 156 IGES 159 (305)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 7654
No 268
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.62 E-value=8.9e-08 Score=91.33 Aligned_cols=93 Identities=16% Similarity=0.110 Sum_probs=75.8
Q ss_pred ccccchHHHHhcc---CCCCCEEEEEcCCCcHHHHHHHhc----CCCcEEEEeCCHHHHHHHHHHHHhcCC--CceEEEE
Q 025428 149 EDLKSEPVEENDK---YLSSWSVLDIGTGNGLLLQELSKQ----GFSDLTGVDYSEDAINLAQSLANRDGF--SCIKFLV 219 (253)
Q Consensus 149 ~~~~~~l~~~l~~---~~~~~~VLDiGcGtG~~~~~la~~----g~~~v~gvD~s~~~l~~ar~~~~~~g~--~~i~~~~ 219 (253)
.++...|++++.. ..++.+|||.+||+|.++..+++. +...++|+|+++.+++.|+.++...|+ .++.+.+
T Consensus 203 ~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~ 282 (542)
T 3lkd_A 203 QPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHN 282 (542)
T ss_dssp HHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred HHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEe
Confidence 4566666666663 346779999999999999888876 234899999999999999999988888 4689999
Q ss_pred eccCCC--c-C-CCCccEEEEccccc
Q 025428 220 DDVLDT--K-L-ERQFQLVMDKGTLD 241 (253)
Q Consensus 220 ~D~~~~--~-~-~~~fD~Vi~~~~l~ 241 (253)
+|.... + . ..+||+|++|..+.
T Consensus 283 gDtL~~d~p~~~~~~fD~IvaNPPf~ 308 (542)
T 3lkd_A 283 ADTLDEDWPTQEPTNFDGVLMNPPYS 308 (542)
T ss_dssp SCTTTSCSCCSSCCCBSEEEECCCTT
T ss_pred cceecccccccccccccEEEecCCcC
Confidence 999876 3 2 37899999998775
No 269
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.61 E-value=4.3e-08 Score=88.86 Aligned_cols=76 Identities=24% Similarity=0.364 Sum_probs=63.2
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcC---CC-----ceEEEEeccCCCcC-----CCC
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDG---FS-----CIKFLVDDVLDTKL-----ERQ 230 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g---~~-----~i~~~~~D~~~~~~-----~~~ 230 (253)
.+.+||+||||+|.++..+++++..+|++||+++.+++.|++++...+ +. +++++.+|+.+... .++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 568999999999999999999877799999999999999999975321 21 69999999988642 478
Q ss_pred ccEEEEccc
Q 025428 231 FQLVMDKGT 239 (253)
Q Consensus 231 fD~Vi~~~~ 239 (253)
||+|+....
T Consensus 268 fDvII~D~~ 276 (364)
T 2qfm_A 268 FDYVINDLT 276 (364)
T ss_dssp EEEEEEECC
T ss_pred ceEEEECCC
Confidence 999998653
No 270
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.56 E-value=6.4e-08 Score=88.89 Aligned_cols=67 Identities=24% Similarity=0.294 Sum_probs=53.2
Q ss_pred CCCEEEEEcCC------CcHHHHHHHhc--CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-------
Q 025428 164 SSWSVLDIGTG------NGLLLQELSKQ--GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE------- 228 (253)
Q Consensus 164 ~~~~VLDiGcG------tG~~~~~la~~--g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~------- 228 (253)
+..+||||||| ||..+..+++. +..+|+|+|+|+.|. ....+++|+++|+.++++.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 56799999999 77777777764 345999999999983 1224899999999997653
Q ss_pred CCccEEEEccc
Q 025428 229 RQFQLVMDKGT 239 (253)
Q Consensus 229 ~~fD~Vi~~~~ 239 (253)
++||+|++++.
T Consensus 287 ~sFDlVisdgs 297 (419)
T 3sso_A 287 GPFDIVIDDGS 297 (419)
T ss_dssp CCEEEEEECSC
T ss_pred CCccEEEECCc
Confidence 89999999764
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.54 E-value=8.8e-08 Score=91.37 Aligned_cols=93 Identities=12% Similarity=0.048 Sum_probs=72.4
Q ss_pred cccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc----C---------------CCcEEEEeCCHHHHHHHHHHHHhc
Q 025428 150 DLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ----G---------------FSDLTGVDYSEDAINLAQSLANRD 210 (253)
Q Consensus 150 ~~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~----g---------------~~~v~gvD~s~~~l~~ar~~~~~~ 210 (253)
.+...|++++.. .++.+|||.|||+|.++..+++. + ...++|+|+++.+++.|+.++...
T Consensus 156 ~iv~~mv~~l~p-~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~ 234 (541)
T 2ar0_A 156 PLIKTIIHLLKP-QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLH 234 (541)
T ss_dssp HHHHHHHHHHCC-CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcc-CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHh
Confidence 344445555433 46779999999999999888764 1 137999999999999999999888
Q ss_pred CCCc-----eEEEEeccCCCcC--CCCccEEEEcccccee
Q 025428 211 GFSC-----IKFLVDDVLDTKL--ERQFQLVMDKGTLDAI 243 (253)
Q Consensus 211 g~~~-----i~~~~~D~~~~~~--~~~fD~Vi~~~~l~~i 243 (253)
|+.+ +.++++|....+. .++||+|+++..+...
T Consensus 235 gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~ 274 (541)
T 2ar0_A 235 DIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSA 274 (541)
T ss_dssp TCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTC
T ss_pred CCCccccccCCeEeCCCcccccccccCCeEEEECCCcccc
Confidence 8765 8899999877542 3789999999877653
No 272
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.51 E-value=9.7e-08 Score=92.36 Aligned_cols=71 Identities=13% Similarity=0.192 Sum_probs=59.3
Q ss_pred CCEEEEEcCCCcHHHHHH---HhcCCC--cEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcCCCCccEEEE
Q 025428 165 SWSVLDIGTGNGLLLQEL---SKQGFS--DLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKLERQFQLVMD 236 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~l---a~~g~~--~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~~~~fD~Vi~ 236 (253)
...|||+|||+|.+..+. +..+.. +|++||.|+ |...+++..+.++..+ |+++++|+++..+++++|+||+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVS 434 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVS 434 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEEC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEE
Confidence 358999999999994444 444333 689999998 6778999988999874 9999999999999999999997
No 273
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.47 E-value=6e-08 Score=78.08 Aligned_cols=62 Identities=10% Similarity=0.080 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---C-CCccEEEEcc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---E-RQFQLVMDKG 238 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---~-~~fD~Vi~~~ 238 (253)
.++.+|||+|||+ +++|+|+.|++.|+++... +++++++|+.++++ + ++||+|++..
T Consensus 11 ~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 11 SAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSAHKESSFDIILSGL 71 (176)
T ss_dssp CTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGCCCSSCEEEEEECC
T ss_pred CCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCccccCCCCCEeEEEECC
Confidence 5788999999996 2399999999999998632 48999999999876 4 7899999999
Q ss_pred cccee
Q 025428 239 TLDAI 243 (253)
Q Consensus 239 ~l~~i 243 (253)
++||+
T Consensus 72 ~l~~~ 76 (176)
T 2ld4_A 72 VPGST 76 (176)
T ss_dssp STTCC
T ss_pred hhhhc
Confidence 99997
No 274
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.42 E-value=1.4e-07 Score=74.67 Aligned_cols=67 Identities=18% Similarity=0.205 Sum_probs=52.5
Q ss_pred hHHHHhccC-CCCCEEEEEcCCCc-HHHHHHHh-cCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC--
Q 025428 154 EPVEENDKY-LSSWSVLDIGTGNG-LLLQELSK-QGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-- 228 (253)
Q Consensus 154 ~l~~~l~~~-~~~~~VLDiGcGtG-~~~~~la~-~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-- 228 (253)
.|.+.+.+. ..+.+|||||||+| ..+..|++ .|+ .|+++|+++.+++ +++.|+.+..+.
T Consensus 24 ~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~---------------~v~dDiF~P~~~~Y 87 (153)
T 2k4m_A 24 DLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG---------------IVRDDITSPRMEIY 87 (153)
T ss_dssp HHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT---------------EECCCSSSCCHHHH
T ss_pred HHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc---------------eEEccCCCCccccc
Confidence 344444433 44679999999999 69999997 677 8999999997655 888999886554
Q ss_pred CCccEEEE
Q 025428 229 RQFQLVMD 236 (253)
Q Consensus 229 ~~fD~Vi~ 236 (253)
+.||+|.+
T Consensus 88 ~~~DLIYs 95 (153)
T 2k4m_A 88 RGAALIYS 95 (153)
T ss_dssp TTEEEEEE
T ss_pred CCcCEEEE
Confidence 58999965
No 275
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.36 E-value=1.6e-06 Score=72.42 Aligned_cols=74 Identities=15% Similarity=0.139 Sum_probs=60.5
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC---CceEEEEeccCCC---------------
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF---SCIKFLVDDVLDT--------------- 225 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~---~~i~~~~~D~~~~--------------- 225 (253)
+.++||++|| |.-+..+++....+|+.||.+++..+.|++++++.|+ .+|+++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 5679999998 5788888875235999999999999999999999986 3799999997653
Q ss_pred c--------CC--CCccEEEEccc
Q 025428 226 K--------LE--RQFQLVMDKGT 239 (253)
Q Consensus 226 ~--------~~--~~fD~Vi~~~~ 239 (253)
+ .+ ++||+|+..+-
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~ 131 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR 131 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS
T ss_pred HHHhhhhhccccCCCCCEEEEeCC
Confidence 1 22 68999998774
No 276
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.35 E-value=5.9e-07 Score=78.61 Aligned_cols=79 Identities=11% Similarity=0.127 Sum_probs=63.8
Q ss_pred hHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C
Q 025428 154 EPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E 228 (253)
Q Consensus 154 ~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~ 228 (253)
++++.+. ..++..+||.+||.|..+..+++++ .+|+|+|.++.+++.|++ ++. .+++++++|+.++.. .
T Consensus 13 e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~~-g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~~g 86 (285)
T 1wg8_A 13 EALDLLA-VRPGGVYVDATLGGAGHARGILERG-GRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAALG 86 (285)
T ss_dssp HHHHHHT-CCTTCEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHHTT
T ss_pred HHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHCC-CEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHHcC
Confidence 3344443 2577899999999999999999984 499999999999999998 644 489999999988741 2
Q ss_pred -CCccEEEEcc
Q 025428 229 -RQFQLVMDKG 238 (253)
Q Consensus 229 -~~fD~Vi~~~ 238 (253)
+++|.|+++-
T Consensus 87 ~~~vDgIL~DL 97 (285)
T 1wg8_A 87 VERVDGILADL 97 (285)
T ss_dssp CSCEEEEEEEC
T ss_pred CCCcCEEEeCC
Confidence 5799999743
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.32 E-value=4.4e-07 Score=86.57 Aligned_cols=92 Identities=15% Similarity=0.084 Sum_probs=70.3
Q ss_pred ccccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc--------C--------CCcEEEEeCCHHHHHHHHHHHHhcCC
Q 025428 149 EDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ--------G--------FSDLTGVDYSEDAINLAQSLANRDGF 212 (253)
Q Consensus 149 ~~~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~--------g--------~~~v~gvD~s~~~l~~ar~~~~~~g~ 212 (253)
..+...|++++.. ...+|||.+||||.++..+++. + ...++|+|+++.+++.|+.++...|+
T Consensus 231 ~~Vv~lmv~ll~p--~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi 308 (544)
T 3khk_A 231 KSIVTLIVEMLEP--YKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI 308 (544)
T ss_dssp HHHHHHHHHHHCC--CSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhc--CCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC
Confidence 3555666666543 2349999999999998887543 0 23799999999999999999988887
Q ss_pred C-ceEEEEeccCCCcC--CCCccEEEEccccce
Q 025428 213 S-CIKFLVDDVLDTKL--ERQFQLVMDKGTLDA 242 (253)
Q Consensus 213 ~-~i~~~~~D~~~~~~--~~~fD~Vi~~~~l~~ 242 (253)
. ++.+.++|....+. ..+||+|++|..+..
T Consensus 309 ~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 309 DFNFGKKNADSFLDDQHPDLRADFVMTNPPFNM 341 (544)
T ss_dssp CCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSC
T ss_pred CcccceeccchhcCcccccccccEEEECCCcCC
Confidence 5 35558899876653 378999999988764
No 278
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.27 E-value=1.1e-06 Score=77.41 Aligned_cols=63 Identities=16% Similarity=0.144 Sum_probs=48.6
Q ss_pred CCCCEEEEEcC------CCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEE-EEeccCCCcCCCCccE
Q 025428 163 LSSWSVLDIGT------GNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFSCIKF-LVDDVLDTKLERQFQL 233 (253)
Q Consensus 163 ~~~~~VLDiGc------GtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~-~~~D~~~~~~~~~fD~ 233 (253)
.++.+|||+|| |+|. ..+++. + ..+|+|+|+|+. +.++++ +++|+.+++++++||+
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~~~~fD~ 126 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHTANKWDL 126 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCCSSCEEE
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCccCcccE
Confidence 46789999999 4466 334443 4 248999999997 136788 9999998877789999
Q ss_pred EEEcccc
Q 025428 234 VMDKGTL 240 (253)
Q Consensus 234 Vi~~~~l 240 (253)
|+++...
T Consensus 127 Vvsn~~~ 133 (290)
T 2xyq_A 127 IISDMYD 133 (290)
T ss_dssp EEECCCC
T ss_pred EEEcCCc
Confidence 9997643
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.24 E-value=7.3e-07 Score=86.70 Aligned_cols=71 Identities=14% Similarity=0.147 Sum_probs=55.4
Q ss_pred CCEEEEEcCCCcHHHHHHHhc----C----------CCcEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEeccCCCcC--
Q 025428 165 SWSVLDIGTGNGLLLQELSKQ----G----------FSDLTGVDYSEDAINLAQSLANRDGFSC-IKFLVDDVLDTKL-- 227 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la~~----g----------~~~v~gvD~s~~~l~~ar~~~~~~g~~~-i~~~~~D~~~~~~-- 227 (253)
...|||+|||+|.++.+.+.. + ..+|++||.|+.++...+.+.. +|+.+ |+++++|++++.+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 458999999999997533221 2 2299999999987765555544 77765 9999999999877
Q ss_pred ----CCCccEEEE
Q 025428 228 ----ERQFQLVMD 236 (253)
Q Consensus 228 ----~~~fD~Vi~ 236 (253)
++++|+||+
T Consensus 489 ~~~~~ekVDIIVS 501 (745)
T 3ua3_A 489 KDRGFEQPDIIVS 501 (745)
T ss_dssp HHTTCCCCSEEEE
T ss_pred ccCCCCcccEEEE
Confidence 689999998
No 280
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.17 E-value=4.7e-06 Score=73.24 Aligned_cols=47 Identities=26% Similarity=0.237 Sum_probs=43.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRD 210 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~ 210 (253)
.++..|||++||+|..+..++..|. +++|+|+++.+++.|++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 4788999999999999999999976 9999999999999999998764
No 281
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.16 E-value=2.8e-06 Score=83.83 Aligned_cols=93 Identities=13% Similarity=-0.040 Sum_probs=66.2
Q ss_pred ccccchHHHH----hcc-CCCCCEEEEEcCCCcHHHHHHHhcC----CCcEEEEeCCHHHHHHH--HHHHHh----cCCC
Q 025428 149 EDLKSEPVEE----NDK-YLSSWSVLDIGTGNGLLLQELSKQG----FSDLTGVDYSEDAINLA--QSLANR----DGFS 213 (253)
Q Consensus 149 ~~~~~~l~~~----l~~-~~~~~~VLDiGcGtG~~~~~la~~g----~~~v~gvD~s~~~l~~a--r~~~~~----~g~~ 213 (253)
.++...++.+ +.. ..++.+|||.|||+|.++..+++.. ..+++|+|+++.+++.| +.++.. .++.
T Consensus 301 ~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~ 380 (878)
T 3s1s_A 301 IELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNN 380 (878)
T ss_dssp HHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTB
T ss_pred HHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCC
Confidence 3445555555 222 1357799999999999999999872 13799999999999999 555544 2333
Q ss_pred ceEEEEeccCCCc--CCCCccEEEEccccc
Q 025428 214 CIKFLVDDVLDTK--LERQFQLVMDKGTLD 241 (253)
Q Consensus 214 ~i~~~~~D~~~~~--~~~~fD~Vi~~~~l~ 241 (253)
+..+...|+.... ..++||+|++|..+-
T Consensus 381 ~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg 410 (878)
T 3s1s_A 381 APTITGEDVCSLNPEDFANVSVVVMNPPYV 410 (878)
T ss_dssp CCEEECCCGGGCCGGGGTTEEEEEECCBCC
T ss_pred cceEEecchhcccccccCCCCEEEECCCcc
Confidence 4566777777643 237899999998773
No 282
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.13 E-value=3.1e-06 Score=76.73 Aligned_cols=72 Identities=13% Similarity=0.100 Sum_probs=57.9
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEcccc
Q 025428 162 YLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTL 240 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l 240 (253)
+.++.+|||+||++|.++..++++|. +|++||+.+ |-.... ...+|+++++|+....++ ++||+|+|..+.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~-l~~~l~------~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGP-MAQSLM------DTGQVTWLREDGFKFRPTRSNISWMVCDMVE 280 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSC-CCHHHH------TTTCEEEECSCTTTCCCCSSCEEEEEECCSS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhh-cChhhc------cCCCeEEEeCccccccCCCCCcCEEEEcCCC
Confidence 35789999999999999999999976 999999875 222111 224799999999998765 689999998765
Q ss_pred c
Q 025428 241 D 241 (253)
Q Consensus 241 ~ 241 (253)
.
T Consensus 281 ~ 281 (375)
T 4auk_A 281 K 281 (375)
T ss_dssp C
T ss_pred C
Confidence 4
No 283
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.00 E-value=1.2e-05 Score=76.46 Aligned_cols=92 Identities=20% Similarity=0.131 Sum_probs=71.7
Q ss_pred ccccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc----C----------CCcEEEEeCCHHHHHHHHHHHHhcCCCc
Q 025428 149 EDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ----G----------FSDLTGVDYSEDAINLAQSLANRDGFSC 214 (253)
Q Consensus 149 ~~~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~----g----------~~~v~gvD~s~~~l~~ar~~~~~~g~~~ 214 (253)
.++...|++++.. ..+.+|+|.+||||.++..+.++ + ...++|+|+++.+...|+.++...|+..
T Consensus 203 ~~Vv~lmv~l~~p-~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~ 281 (530)
T 3ufb_A 203 RPVVRFMVEVMDP-QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEY 281 (530)
T ss_dssp HHHHHHHHHHHCC-CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHhhcc-CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcc
Confidence 3555556665544 56779999999999999877653 1 1369999999999999999998888877
Q ss_pred eEEEEeccCCCcC-----CCCccEEEEccccc
Q 025428 215 IKFLVDDVLDTKL-----ERQFQLVMDKGTLD 241 (253)
Q Consensus 215 i~~~~~D~~~~~~-----~~~fD~Vi~~~~l~ 241 (253)
..+.++|....+. ..+||+|++|..+.
T Consensus 282 ~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~ 313 (530)
T 3ufb_A 282 PRIDPENSLRFPLREMGDKDRVDVILTNPPFG 313 (530)
T ss_dssp CEEECSCTTCSCGGGCCGGGCBSEEEECCCSS
T ss_pred ccccccccccCchhhhcccccceEEEecCCCC
Confidence 7888899876543 15799999998774
No 284
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.96 E-value=4.8e-05 Score=66.96 Aligned_cols=76 Identities=20% Similarity=0.377 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhc--C---CCceEEEEeccCCCcC--CCCccEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRD--G---FSCIKFLVDDVLDTKL--ERQFQLV 234 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~--g---~~~i~~~~~D~~~~~~--~~~fD~V 234 (253)
...++||-||.|.|..+..++++ +..+|+.|||++.+++.|++.+... + -++++++.+|....-. .++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 45689999999999999999998 5569999999999999999976431 2 1379999999998753 3789999
Q ss_pred EEcc
Q 025428 235 MDKG 238 (253)
Q Consensus 235 i~~~ 238 (253)
+...
T Consensus 162 i~D~ 165 (294)
T 3o4f_A 162 ISDC 165 (294)
T ss_dssp EESC
T ss_pred EEeC
Confidence 9754
No 285
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.95 E-value=1.8e-05 Score=71.66 Aligned_cols=91 Identities=15% Similarity=-0.022 Sum_probs=75.0
Q ss_pred ccchHHHHhccCCCCCEEEEEcCCCcHHHHHHHhcCC-CcEEEEeCCHHHHHHHHHHHHhcCC------CceEEEEeccC
Q 025428 151 LKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGF-SDLTGVDYSEDAINLAQSLANRDGF------SCIKFLVDDVL 223 (253)
Q Consensus 151 ~~~~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~g~-~~v~gvD~s~~~l~~ar~~~~~~g~------~~i~~~~~D~~ 223 (253)
..+.+...+..+.++.+|||+++|.|.-+..++..+. ..|+++|+++..++..++++++.+. .++.+.+.|..
T Consensus 135 ~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~ 214 (359)
T 4fzv_A 135 AASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGR 214 (359)
T ss_dssp GGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGG
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchh
Confidence 4666777777888999999999999999999998843 2799999999999999999988765 36888999988
Q ss_pred CCc--CCCCccEEEEccccc
Q 025428 224 DTK--LERQFQLVMDKGTLD 241 (253)
Q Consensus 224 ~~~--~~~~fD~Vi~~~~l~ 241 (253)
.++ ..++||.|++.....
T Consensus 215 ~~~~~~~~~fD~VLlDaPCS 234 (359)
T 4fzv_A 215 KWGELEGDTYDRVLVDVPCT 234 (359)
T ss_dssp GHHHHSTTCEEEEEEECCCC
T ss_pred hcchhccccCCEEEECCccC
Confidence 764 347899999866543
No 286
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.74 E-value=5e-05 Score=65.37 Aligned_cols=49 Identities=24% Similarity=0.209 Sum_probs=43.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF 212 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~ 212 (253)
.++..|||.+||+|..+....+.|. +++|+|+++.+++.+++|++.+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhccC
Confidence 4788999999999999999999965 999999999999999999876654
No 287
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.70 E-value=1.3e-05 Score=69.83 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEcccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKGTL 240 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~~l 240 (253)
.++.+|||+|||+|.++..++.+ +...++|+|++..+....+.. ...+. ++.+++.++....++ ++||+|++....
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~-~ii~~~~~~dv~~l~~~~~DlVlsD~ap 150 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGW-NIITFKDKTDIHRLEPVKCDTLLCDIGE 150 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTG-GGEEEECSCCTTTSCCCCCSEEEECCCC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCC-CeEEEeccceehhcCCCCccEEEecCcc
Confidence 46679999999999999998876 566889999885431111100 01121 556667765444444 789999998866
Q ss_pred c
Q 025428 241 D 241 (253)
Q Consensus 241 ~ 241 (253)
+
T Consensus 151 n 151 (277)
T 3evf_A 151 S 151 (277)
T ss_dssp C
T ss_pred C
Confidence 6
No 288
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.66 E-value=1.3e-05 Score=69.77 Aligned_cols=76 Identities=12% Similarity=0.004 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEe--ccCCCcCCCCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVD--DVLDTKLERQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~--D~~~~~~~~~fD~Vi~~~~ 239 (253)
.++.+|||||||+|.++..++.. +...|+|+|++..+...+... +..+ .++..+.. |+..+ .+.++|+|+|...
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g-~~ii~~~~~~dv~~l-~~~~~DvVLSDmA 165 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG-WNLIRFKDKTDVFNM-EVIPGDTLLCDIG 165 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT-GGGEEEECSCCGGGS-CCCCCSEEEECCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC-CceEEeeCCcchhhc-CCCCcCEEEecCc
Confidence 56679999999999999998865 666899999987643222110 0112 14444443 44333 2378999999887
Q ss_pred cc
Q 025428 240 LD 241 (253)
Q Consensus 240 l~ 241 (253)
.+
T Consensus 166 pn 167 (282)
T 3gcz_A 166 ES 167 (282)
T ss_dssp CC
T ss_pred cC
Confidence 66
No 289
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.60 E-value=1.6e-05 Score=67.67 Aligned_cols=74 Identities=14% Similarity=0.166 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEe-ccCCCcCCCCccEEEEcc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVD-DVLDTKLERQFQLVMDKG 238 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~-D~~~~~~~~~fD~Vi~~~ 238 (253)
.++.+|||+||++|.++.+.+.+ |..+|+|+|+-..-.+. -...+..|...++|.++ |+..++. .++|+|+|..
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~~~-~~~DtllcDI 152 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYLPP-EKCDTLLCDI 152 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGCCC-CCCSEEEECC
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeecCC-ccccEEEEec
Confidence 56779999999999999988877 77799999997632210 00112345556999999 9866643 6799999854
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.53 E-value=0.00021 Score=62.56 Aligned_cols=77 Identities=10% Similarity=-0.019 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc----C--CCcEEEEeCCHH--------------------------HHHHHHHHHHhc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ----G--FSDLTGVDYSED--------------------------AINLAQSLANRD 210 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~----g--~~~v~gvD~s~~--------------------------~l~~ar~~~~~~ 210 (253)
...+.||++||.+|..+..++.. + ..+|+++|..+. .++.+++++++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 45679999999999999887653 1 348999996421 478899999999
Q ss_pred CC--CceEEEEeccCCCc--C-CCCccEEEEccc
Q 025428 211 GF--SCIKFLVDDVLDTK--L-ERQFQLVMDKGT 239 (253)
Q Consensus 211 g~--~~i~~~~~D~~~~~--~-~~~fD~Vi~~~~ 239 (253)
|+ .+|+++.||+.+.. . .++||+|+...-
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD 218 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD 218 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC
Confidence 98 57999999997642 2 368999997653
No 291
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.45 E-value=0.00028 Score=63.13 Aligned_cols=80 Identities=15% Similarity=0.041 Sum_probs=61.4
Q ss_pred hHHHHhccCCCCCEEEEEcCCCcHHHHHHHhc-C-CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----
Q 025428 154 EPVEENDKYLSSWSVLDIGTGNGLLLQELSKQ-G-FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---- 227 (253)
Q Consensus 154 ~l~~~l~~~~~~~~VLDiGcGtG~~~~~la~~-g-~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---- 227 (253)
++++.+. ..++..+||..||.|..+..+++. | ..+|+|+|.++.+++.++ ++ .-.+++++++++.++..
T Consensus 48 Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~~~Rv~lv~~nF~~l~~~L~~ 122 (347)
T 3tka_A 48 EAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---DDPRFSIIHGPFSALGEYVAE 122 (347)
T ss_dssp HHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---CCTTEEEEESCGGGHHHHHHH
T ss_pred HHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---cCCcEEEEeCCHHHHHHHHHh
Confidence 3444443 257889999999999999999987 3 348999999999999995 44 22479999999988741
Q ss_pred ---CCCccEEEEcc
Q 025428 228 ---ERQFQLVMDKG 238 (253)
Q Consensus 228 ---~~~fD~Vi~~~ 238 (253)
.+++|.|+.+-
T Consensus 123 ~g~~~~vDgILfDL 136 (347)
T 3tka_A 123 RDLIGKIDGILLDL 136 (347)
T ss_dssp TTCTTCEEEEEEEC
T ss_pred cCCCCcccEEEECC
Confidence 13699988754
No 292
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.41 E-value=0.00017 Score=63.30 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEe-ccCCCcCCCCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVD-DVLDTKLERQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~-D~~~~~~~~~fD~Vi~~~~ 239 (253)
.++.+||||||++|.++.+.+.+ |...|+|+|+-..-.+.= ...+..+...+.++.+ |+..++. .++|+|+|.-.
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w~lV~~~~~~Dv~~l~~-~~~D~ivcDig 169 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGWNIVTMKSGVDVFYRPS-ECCDTLLCDIG 169 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTGGGEEEECSCCTTSSCC-CCCSEEEECCC
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCCcceEEEeccCHhhCCC-CCCCEEEEECc
Confidence 56779999999999999988877 777899999976411000 0001122223788887 8877754 67999998643
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.35 E-value=0.00028 Score=64.12 Aligned_cols=76 Identities=22% Similarity=0.344 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc---CC-----CceEEEEeccCCCc-----CCC
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRD---GF-----SCIKFLVDDVLDTK-----LER 229 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~---g~-----~~i~~~~~D~~~~~-----~~~ 229 (253)
.+.++||-||.|.|..+..+++++.++|+.|||++.+++.|++.+... .. ++++++.+|....- -.+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 356799999999999999999987779999999999999999975321 11 24899999987653 136
Q ss_pred CccEEEEcc
Q 025428 230 QFQLVMDKG 238 (253)
Q Consensus 230 ~fD~Vi~~~ 238 (253)
+||+|+...
T Consensus 284 ~yDvIIvDl 292 (381)
T 3c6k_A 284 EFDYVINDL 292 (381)
T ss_dssp CEEEEEEEC
T ss_pred ceeEEEECC
Confidence 899999764
No 294
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.35 E-value=0.00041 Score=62.59 Aligned_cols=74 Identities=14% Similarity=0.079 Sum_probs=57.1
Q ss_pred cccchHHHHhccCC-----CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccC
Q 025428 150 DLKSEPVEENDKYL-----SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVL 223 (253)
Q Consensus 150 ~~~~~l~~~l~~~~-----~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~ 223 (253)
.+...+++.+.... ++..|||||.|.|.++..|+.. ..++|+++|+++.++...++.. . ..+++++++|+.
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--~~~l~ii~~D~l 115 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--GSPLQILKRDPY 115 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--TSSCEEECSCTT
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--CCCEEEEECCcc
Confidence 34445555554211 3579999999999999999986 3458999999999999998876 2 258999999997
Q ss_pred CCc
Q 025428 224 DTK 226 (253)
Q Consensus 224 ~~~ 226 (253)
.+.
T Consensus 116 ~~~ 118 (353)
T 1i4w_A 116 DWS 118 (353)
T ss_dssp CHH
T ss_pred chh
Confidence 653
No 295
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.20 E-value=0.00022 Score=61.52 Aligned_cols=75 Identities=16% Similarity=0.240 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-------CC------CcEEEEeCCH---HHHH-----------HHHHHHHh-------
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-------GF------SDLTGVDYSE---DAIN-----------LAQSLANR------- 209 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-------g~------~~v~gvD~s~---~~l~-----------~ar~~~~~------- 209 (253)
+..+|||+|+|+|..+..++.. +. .+++++|..+ +++. .++++++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4569999999999998876542 11 3899999876 5555 55665543
Q ss_pred -------cCCCceEEEEeccCCC-c-CCC----CccEEEEcc
Q 025428 210 -------DGFSCIKFLVDDVLDT-K-LER----QFQLVMDKG 238 (253)
Q Consensus 210 -------~g~~~i~~~~~D~~~~-~-~~~----~fD~Vi~~~ 238 (253)
.+..+++++.+|+.+. + .+. .||+|+..+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~ 181 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG 181 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC
Confidence 1223688999998874 2 222 799999864
No 296
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.14 E-value=0.0013 Score=59.80 Aligned_cols=84 Identities=13% Similarity=0.115 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc------------C---C-CcEEEEeCCHHHHHHHHHHHHhc-------------CCCc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ------------G---F-SDLTGVDYSEDAINLAQSLANRD-------------GFSC 214 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~------------g---~-~~v~gvD~s~~~l~~ar~~~~~~-------------g~~~ 214 (253)
+..+|+|+|||+|..+..+... | . -+|+..|+-.+.-...-+.+... +...
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 3579999999999999887321 1 1 16777787666554443333211 0001
Q ss_pred --eEEEEeccCCCcCC-CCccEEEEccccceeccCC
Q 025428 215 --IKFLVDDVLDTKLE-RQFQLVMDKGTLDAIGLHP 247 (253)
Q Consensus 215 --i~~~~~D~~~~~~~-~~fD~Vi~~~~l~~i~~~p 247 (253)
+.-+-+.+..-.++ ++||+|+++.+|||+.-.|
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p 167 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVP 167 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCC
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCc
Confidence 22233333333444 8999999999999996555
No 297
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.01 E-value=0.0012 Score=59.84 Aligned_cols=72 Identities=18% Similarity=0.165 Sum_probs=58.7
Q ss_pred CEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------CCCccEEEE
Q 025428 166 WSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------ERQFQLVMD 236 (253)
Q Consensus 166 ~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~~~fD~Vi~ 236 (253)
.++||+.||.|.++.-+...|+..+.++|+++.+++..+.|. .+..++++|+.++.. ...+|+|+.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~g 77 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIG 77 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHhhcccCCCeeEEEe
Confidence 489999999999999999999977889999999998888764 356788999988742 257999987
Q ss_pred ccccce
Q 025428 237 KGTLDA 242 (253)
Q Consensus 237 ~~~l~~ 242 (253)
......
T Consensus 78 gpPCQ~ 83 (376)
T 3g7u_A 78 GPPCQG 83 (376)
T ss_dssp CCCCCT
T ss_pred cCCCCC
Confidence 655443
No 298
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.00 E-value=0.00058 Score=61.17 Aligned_cols=73 Identities=14% Similarity=0.190 Sum_probs=57.1
Q ss_pred CEEEEEcCCCcHHHHHHHhcC--CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---C-CCccEEEEccc
Q 025428 166 WSVLDIGTGNGLLLQELSKQG--FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---E-RQFQLVMDKGT 239 (253)
Q Consensus 166 ~~VLDiGcGtG~~~~~la~~g--~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---~-~~fD~Vi~~~~ 239 (253)
.+|||+.||.|.++..+...| +..|+++|+++.+++..+.|.. +..++++|+.++.. + ..+|+++....
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 489999999999999999988 5589999999999999998853 34578899988742 1 26899998766
Q ss_pred ccee
Q 025428 240 LDAI 243 (253)
Q Consensus 240 l~~i 243 (253)
...+
T Consensus 78 Cq~f 81 (343)
T 1g55_A 78 CQPF 81 (343)
T ss_dssp ----
T ss_pred Ccch
Confidence 5444
No 299
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.97 E-value=0.0019 Score=57.47 Aligned_cols=73 Identities=11% Similarity=0.085 Sum_probs=58.7
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC--CCccEEEEccccc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE--RQFQLVMDKGTLD 241 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~--~~fD~Vi~~~~l~ 241 (253)
...++||+.||.|.++..+...|+..+.++|+++.+++..+.|.... . ++|+.++... ..+|+|+......
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~----~---~~Di~~~~~~~~~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK----P---EGDITQVNEKTIPDHDILCAGFPCQ 82 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC----C---BSCGGGSCGGGSCCCSEEEEECCCT
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC----C---cCCHHHcCHhhCCCCCEEEECCCCC
Confidence 35699999999999999999999988999999999999999886321 1 6888876532 4689999876655
Q ss_pred ee
Q 025428 242 AI 243 (253)
Q Consensus 242 ~i 243 (253)
.+
T Consensus 83 ~f 84 (327)
T 2c7p_A 83 AF 84 (327)
T ss_dssp TT
T ss_pred Cc
Confidence 54
No 300
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.92 E-value=0.0002 Score=63.59 Aligned_cols=61 Identities=8% Similarity=-0.062 Sum_probs=50.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT 225 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~ 225 (253)
.++..|||..||+|..+......|. +.+|+|+++..++.+++++...+. ....++.|+.++
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~-~~~~~~~~~~~i 311 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNNI-SEEKITDIYNRI 311 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSCS-CHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhccc-chHHHHHHHHHH
Confidence 4788999999999999999999965 999999999999999999876654 344455555544
No 301
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.90 E-value=0.00034 Score=61.37 Aligned_cols=76 Identities=16% Similarity=0.106 Sum_probs=48.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEe--ccCCCcCCCCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVD--DVLDTKLERQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~--D~~~~~~~~~fD~Vi~~~~ 239 (253)
.++.+|||+||++|.++..++++ +...|+|+|+...+....+. ....+. ++..... |+..+ .+.++|+|++...
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l-~~~~~DlVlsD~A 156 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTM-PTEPSDTLLCDIG 156 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTS-CCCCCSEEEECCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCC-ceEEeecCceeeec-CCCCcCEEeecCc
Confidence 57789999999999999999986 66689999997643111000 000111 3333333 33332 2378999999876
Q ss_pred cc
Q 025428 240 LD 241 (253)
Q Consensus 240 l~ 241 (253)
.+
T Consensus 157 Pn 158 (300)
T 3eld_A 157 ES 158 (300)
T ss_dssp CC
T ss_pred CC
Confidence 55
No 302
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.87 E-value=0.0031 Score=57.44 Aligned_cols=81 Identities=10% Similarity=-0.015 Sum_probs=54.6
Q ss_pred CCEEEEEcCCCcHHHHHHHhc--------------C---C-CcEEEEeCC-----------HHHHHHHHHHHHhcCC-Cc
Q 025428 165 SWSVLDIGTGNGLLLQELSKQ--------------G---F-SDLTGVDYS-----------EDAINLAQSLANRDGF-SC 214 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la~~--------------g---~-~~v~gvD~s-----------~~~l~~ar~~~~~~g~-~~ 214 (253)
..+|+|+||++|..++.+... + . -+|+..|+- +.+.+..++. .|- .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---ccCCCC
Confidence 468999999999998877754 0 1 168888887 5444443222 221 13
Q ss_pred eEEEEeccCC---CcCC-CCccEEEEccccceeccCCC
Q 025428 215 IKFLVDDVLD---TKLE-RQFQLVMDKGTLDAIGLHPD 248 (253)
Q Consensus 215 i~~~~~D~~~---~~~~-~~fD~Vi~~~~l~~i~~~pd 248 (253)
.-|+.+.-.. -.++ ++||+|+++.+|||+.-.|.
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~ 167 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPS 167 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCC
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCch
Confidence 3566654433 3455 89999999999999976664
No 303
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.54 E-value=0.00057 Score=58.82 Aligned_cols=74 Identities=12% Similarity=0.148 Sum_probs=45.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHh-cCCCceEEEEe-ccCCCcCCCCccEEEEccc
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANR-DGFSCIKFLVD-DVLDTKLERQFQLVMDKGT 239 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~-~g~~~i~~~~~-D~~~~~~~~~fD~Vi~~~~ 239 (253)
+++.+|||+||+.|.++..+++. +...|.|.++.... . ....... .|..-++|+++ |+.++. +.++|+|+|...
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~P~~~~~~Gv~~i~~~~G~Df~~~~-~~~~DvVLSDMA 148 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EEPMLMQSYGWNIVTMKSGVDVFYKP-SEISDTLLCDIG 148 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CCCCCCCSTTGGGEEEECSCCGGGSC-CCCCSEEEECCC
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cCCCcccCCCceEEEeeccCCccCCC-CCCCCEEEeCCC
Confidence 57889999999999999999987 22233444443320 0 0000000 12212466667 998753 468999999753
No 304
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.49 E-value=0.0066 Score=55.54 Aligned_cols=63 Identities=21% Similarity=0.204 Sum_probs=51.2
Q ss_pred CCCCCEEEEEcCCCcHHHHHHH-hc-C-CCcEEEEeCCHHHHHHHHHHHHh---cCC-CceEEEEeccCC
Q 025428 162 YLSSWSVLDIGTGNGLLLQELS-KQ-G-FSDLTGVDYSEDAINLAQSLANR---DGF-SCIKFLVDDVLD 224 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG~~~~~la-~~-g-~~~v~gvD~s~~~l~~ar~~~~~---~g~-~~i~~~~~D~~~ 224 (253)
..++..++|+|++.|.++..++ +. + ..+|+++|.++...+..+++++. ++. .++++++.-+-+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 3578899999999999999988 44 3 25999999999999999999987 345 678877655543
No 305
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.44 E-value=0.0018 Score=58.46 Aligned_cols=85 Identities=11% Similarity=0.082 Sum_probs=59.0
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc------------C---C--CcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEe---cc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ------------G---F--SDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVD---DV 222 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~------------g---~--~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~---D~ 222 (253)
..-+|+|+||++|..++.+... + . -+|+..|+..+......+.+....- .+.-|+.+ .+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3468999999999877665543 2 1 1789999999888888776643110 02244444 44
Q ss_pred CCCcCC-CCccEEEEccccceeccCCC
Q 025428 223 LDTKLE-RQFQLVMDKGTLDAIGLHPD 248 (253)
Q Consensus 223 ~~~~~~-~~fD~Vi~~~~l~~i~~~pd 248 (253)
..-.++ +++|+|+++.+|||+.-.|+
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~ 157 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPI 157 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCS
T ss_pred hhccCCCCceEEEEehhhhhhcccCch
Confidence 444555 89999999999999976553
No 306
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.37 E-value=0.0049 Score=54.62 Aligned_cols=48 Identities=19% Similarity=0.234 Sum_probs=41.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCH---HHHHHHHHHHHhcC
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSE---DAINLAQSLANRDG 211 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~---~~l~~ar~~~~~~g 211 (253)
.++..|||..||+|..+......|. +.+|+|+++ ..++.+++|+...+
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHcc
Confidence 4788999999999999999999965 999999999 99999999987654
No 307
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.30 E-value=0.0008 Score=58.74 Aligned_cols=75 Identities=11% Similarity=0.005 Sum_probs=60.9
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC-----cCCCCccEEEEcc
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT-----KLERQFQLVMDKG 238 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~-----~~~~~fD~Vi~~~ 238 (253)
.+..+||+-+|||.+++.+.+. ..+++.+|.++..++..++|++. ..++++++.|.... +...+||+|++..
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred cCCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 4567999999999999999996 47999999999999999998865 24799999997553 1225799999866
Q ss_pred ccc
Q 025428 239 TLD 241 (253)
Q Consensus 239 ~l~ 241 (253)
.+.
T Consensus 168 PYe 170 (283)
T 2oo3_A 168 SYE 170 (283)
T ss_dssp CCC
T ss_pred CCC
Confidence 554
No 308
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.19 E-value=0.009 Score=52.50 Aligned_cols=70 Identities=14% Similarity=0.218 Sum_probs=56.7
Q ss_pred EEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC--CCccEEEEccccce
Q 025428 167 SVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE--RQFQLVMDKGTLDA 242 (253)
Q Consensus 167 ~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~--~~fD~Vi~~~~l~~ 242 (253)
+|||+.||.|.+..-|-..|+.-+.++|+++.+++.-+.|. .-.++++|+.++... ...|+++......-
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~------~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~ 73 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH------SAKLIKGDISKISSDEFPKCDGIIGGPPSQS 73 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC------CSEEEESCGGGCCGGGSCCCSEEECCCCGGG
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC------CCCcccCChhhCCHhhCCcccEEEecCCCCC
Confidence 79999999999999998889978889999999988888764 236788999887643 56898886554443
No 309
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.12 E-value=0.028 Score=49.19 Aligned_cols=76 Identities=20% Similarity=0.202 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHhcCCCc--EEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---C--CCccEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELSKQGFSD--LTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---E--RQFQLVM 235 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la~~g~~~--v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---~--~~fD~Vi 235 (253)
....++||+.||.|.+...+...|+.. |.++|+++.+++.-+.|. .+..++.+|+.++.. + ..+|+++
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~~i~~~~~~Dll~ 88 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQKHIQEWGPFDLVI 88 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHHHHHHTCCCSEEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHHHhcccCCcCEEE
Confidence 355699999999999999999999865 699999999988777664 245688899988752 1 4699999
Q ss_pred Ecccccee
Q 025428 236 DKGTLDAI 243 (253)
Q Consensus 236 ~~~~l~~i 243 (253)
.......+
T Consensus 89 ggpPCQ~f 96 (295)
T 2qrv_A 89 GGSPCNDL 96 (295)
T ss_dssp ECCCCGGG
T ss_pred ecCCCccc
Confidence 87666555
No 310
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.34 E-value=0.025 Score=50.36 Aligned_cols=73 Identities=11% Similarity=0.126 Sum_probs=56.8
Q ss_pred CEEEEEcCCCcHHHHHHHhcCC--CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---C-CCccEEEEccc
Q 025428 166 WSVLDIGTGNGLLLQELSKQGF--SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---E-RQFQLVMDKGT 239 (253)
Q Consensus 166 ~~VLDiGcGtG~~~~~la~~g~--~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---~-~~fD~Vi~~~~ 239 (253)
-+++|+.||.|.+..-+...|+ ..|.++|+++.+++.-+.|.. +..++++|+.++.. + ..+|+++....
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~~~~~D~l~ggpP 78 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIKKWNVDTILMSPP 78 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHHHTTCCEEEECCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhccCCCCEEEecCC
Confidence 3799999999999999988876 568899999999988887752 34567889988753 2 36899987655
Q ss_pred ccee
Q 025428 240 LDAI 243 (253)
Q Consensus 240 l~~i 243 (253)
...+
T Consensus 79 CQ~f 82 (333)
T 4h0n_A 79 CQPF 82 (333)
T ss_dssp CCCS
T ss_pred Ccch
Confidence 4433
No 311
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.23 E-value=0.032 Score=49.56 Aligned_cols=74 Identities=12% Similarity=0.063 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCC--CcE-EEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---C-CCccEEEE
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGF--SDL-TGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---E-RQFQLVMD 236 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~--~~v-~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---~-~~fD~Vi~ 236 (253)
..-+++|+.||.|.+..-+...|+ ..+ .++|+++.+++.-+.|... . ++++|+.++.. + ..+|+++.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~-~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----E-VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----C-CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----C-cccCChhhcCHHHhccCCCCEEEe
Confidence 345899999999999999998884 566 7999999999988888632 1 56789888753 2 36899987
Q ss_pred cccccee
Q 025428 237 KGTLDAI 243 (253)
Q Consensus 237 ~~~l~~i 243 (253)
......+
T Consensus 83 gpPCQ~f 89 (327)
T 3qv2_A 83 SPPCQPY 89 (327)
T ss_dssp CCCCTTC
T ss_pred cCCccCc
Confidence 6554433
No 312
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=94.27 E-value=0.09 Score=46.18 Aligned_cols=66 Identities=14% Similarity=0.098 Sum_probs=45.2
Q ss_pred CCCCEEEEEcC------CCcHHHHHHHhcCC--CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEE
Q 025428 163 LSSWSVLDIGT------GNGLLLQELSKQGF--SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLV 234 (253)
Q Consensus 163 ~~~~~VLDiGc------GtG~~~~~la~~g~--~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~V 234 (253)
+.+.+|||+|+ -.|.. .+.+.+. ..|+++|+.+-. ...+ .++++|+......++||+|
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~-----------sda~-~~IqGD~~~~~~~~k~DLV 173 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV-----------SDAD-STLIGDCATVHTANKWDLI 173 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB-----------CSSS-EEEESCGGGEEESSCEEEE
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc-----------cCCC-eEEEccccccccCCCCCEE
Confidence 57889999996 55663 3333322 289999998821 1113 4599998776666899999
Q ss_pred EEccccce
Q 025428 235 MDKGTLDA 242 (253)
Q Consensus 235 i~~~~l~~ 242 (253)
++...-..
T Consensus 174 ISDMAPNt 181 (344)
T 3r24_A 174 ISDMYDPR 181 (344)
T ss_dssp EECCCCTT
T ss_pred EecCCCCc
Confidence 99765433
No 313
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.12 E-value=0.043 Score=51.33 Aligned_cols=77 Identities=12% Similarity=0.184 Sum_probs=57.5
Q ss_pred CCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------------
Q 025428 165 SWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----------------- 227 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----------------- 227 (253)
.-++||+.||.|.+..-|...|+..|.++|+++.+++.-+.|.... ++..++++|+.++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~--p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~ 165 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD--PATHHFNEDIRDITLSHQEGVSDEAAAEHIRQ 165 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC--TTTCEEESCTHHHHCTTCTTSCHHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC--CCcceeccchhhhhhccccccchhhHHhhhhh
Confidence 3589999999999999999889877899999999888887764211 234567788876531
Q ss_pred -CCCccEEEEcccccee
Q 025428 228 -ERQFQLVMDKGTLDAI 243 (253)
Q Consensus 228 -~~~fD~Vi~~~~l~~i 243 (253)
...+|+++.......+
T Consensus 166 ~~~~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 166 HIPEHDVLLAGFPCQPF 182 (482)
T ss_dssp HSCCCSEEEEECCCCCC
T ss_pred cCCCCCEEEecCCCcch
Confidence 1358988876554443
No 314
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.00 E-value=0.15 Score=46.22 Aligned_cols=77 Identities=16% Similarity=0.253 Sum_probs=51.9
Q ss_pred CCEEEEEcCCCcHHHHHHHhc--------CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEE
Q 025428 165 SWSVLDIGTGNGLLLQELSKQ--------GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMD 236 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la~~--------g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~ 236 (253)
.-.|+|+|.|+|.++.-+.+. ...+++.||+|+...+.-++++... .+|.+. .++.+++ ...=+|++
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~--~~v~W~-~~l~~lp--~~~~~viA 155 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI--RNIHWH-DSFEDVP--EGPAVILA 155 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC--SSEEEE-SSGGGSC--CSSEEEEE
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC--CCeEEe-CChhhcC--CCCeEEEe
Confidence 347999999999997766542 1227999999998877666555432 246654 2333443 22458888
Q ss_pred ccccceeccC
Q 025428 237 KGTLDAIGLH 246 (253)
Q Consensus 237 ~~~l~~i~~~ 246 (253)
|.+|+.+.++
T Consensus 156 NE~fDAlPv~ 165 (387)
T 1zkd_A 156 NEYFDVLPIH 165 (387)
T ss_dssp ESSGGGSCCE
T ss_pred ccccccCceE
Confidence 9998887653
No 315
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=92.91 E-value=0.17 Score=46.66 Aligned_cols=76 Identities=22% Similarity=0.408 Sum_probs=53.0
Q ss_pred CCEEEEEcCCCcHHHHHHHhc----C--CCcEEEEeCCHHHHHHHHHHHHhcC--C-CceEEEEeccCCCcCCCCcc-EE
Q 025428 165 SWSVLDIGTGNGLLLQELSKQ----G--FSDLTGVDYSEDAINLAQSLANRDG--F-SCIKFLVDDVLDTKLERQFQ-LV 234 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la~~----g--~~~v~gvD~s~~~l~~ar~~~~~~g--~-~~i~~~~~D~~~~~~~~~fD-~V 234 (253)
..+|+|+|.|+|.++.-+.+. + ..+++.||+|+.+.+.-++++.... + .++.+.. + ++..|. +|
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~v~W~~----~--lP~~~~g~i 211 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGAQAPGLAARVRWLD----A--LPERFEGVV 211 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHHHSTTTGGGEEEES----S--CCSCEEEEE
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhccccccCCCceecc----c--CCccCceEE
Confidence 469999999999987666542 2 2379999999988887777775421 1 2567643 1 233454 78
Q ss_pred EEccccceeccC
Q 025428 235 MDKGTLDAIGLH 246 (253)
Q Consensus 235 i~~~~l~~i~~~ 246 (253)
++|.+|+.+.++
T Consensus 212 iANE~fDAlPv~ 223 (432)
T 4f3n_A 212 VGNEVLDAMPVR 223 (432)
T ss_dssp EEESCGGGSCCE
T ss_pred EeehhhccCcee
Confidence 889999887653
No 316
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.28 E-value=0.52 Score=35.41 Aligned_cols=62 Identities=19% Similarity=0.243 Sum_probs=43.4
Q ss_pred CCEEEEEcCCCcHHHHHHH----hcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----C-CCccEEE
Q 025428 165 SWSVLDIGTGNGLLLQELS----KQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----E-RQFQLVM 235 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la----~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----~-~~fD~Vi 235 (253)
..+|+=+||| .++..++ +.|. +|+++|.+++.++.+++. .+.++.+|..+... . ..+|+|+
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~-------~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE-------GFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-------TCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC-------CCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 4578899985 4544444 4466 899999999888776642 35788899877531 2 4688887
Q ss_pred E
Q 025428 236 D 236 (253)
Q Consensus 236 ~ 236 (253)
.
T Consensus 76 ~ 76 (141)
T 3llv_A 76 I 76 (141)
T ss_dssp E
T ss_pred E
Confidence 6
No 317
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=91.95 E-value=0.43 Score=42.27 Aligned_cols=79 Identities=18% Similarity=0.256 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcC---------------------CCceEEEEec
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDG---------------------FSCIKFLVDD 221 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g---------------------~~~i~~~~~D 221 (253)
+...|+.+|||.......+... +...++-||. |++++.-++.+...+ -.+..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4579999999999999999875 2236777777 888888888776542 1468999999
Q ss_pred cCCCcC---------C-CCccEEEEcccccee
Q 025428 222 VLDTKL---------E-RQFQLVMDKGTLDAI 243 (253)
Q Consensus 222 ~~~~~~---------~-~~fD~Vi~~~~l~~i 243 (253)
+.+... + +...++++-++|.++
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL 207 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYM 207 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGS
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCC
Confidence 988421 2 457889998998887
No 318
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=91.65 E-value=0.75 Score=39.06 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=59.1
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E-- 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~-- 228 (253)
.+++.+|=-|++.|. ++..|++.|+ +|+.+|.+++.++...+.++..|. ++.++++|+.+... .
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 367888888987776 4666777787 899999999999988888877764 78899999987531 1
Q ss_pred CCccEEEEccc
Q 025428 229 RQFQLVMDKGT 239 (253)
Q Consensus 229 ~~fD~Vi~~~~ 239 (253)
+..|+++.+.-
T Consensus 83 G~iDiLVNNAG 93 (254)
T 4fn4_A 83 SRIDVLCNNAG 93 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 57899888764
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=90.91 E-value=0.29 Score=43.96 Aligned_cols=45 Identities=16% Similarity=0.101 Sum_probs=37.7
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
+..++.+||-+|+|. |.++..+++. |+.+|+++|.+++.++.+++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 446788999999986 8888888886 76689999999998888764
No 320
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=90.72 E-value=0.47 Score=48.14 Aligned_cols=74 Identities=12% Similarity=0.135 Sum_probs=54.1
Q ss_pred CCEEEEEcCCCcHHHHHHHhcCC-CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCC-----------------Cc
Q 025428 165 SWSVLDIGTGNGLLLQELSKQGF-SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLD-----------------TK 226 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la~~g~-~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~-----------------~~ 226 (253)
..++||+.||.|.++.-|...|+ ..+.++|+++.+++.-+.|. .+..++.+|+.+ ++
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp 614 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN-----PGSTVFTEDCNILLKLVMAGETTNSRGQRLP 614 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHHHTCSBCTTCCBCC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC-----CCCccccccHHHHhhhccchhhhhhhhhhcc
Confidence 34899999999999999988887 57889999999988777763 245566666432 11
Q ss_pred CCCCccEEEEcccccee
Q 025428 227 LERQFQLVMDKGTLDAI 243 (253)
Q Consensus 227 ~~~~fD~Vi~~~~l~~i 243 (253)
..+.+|+|+.......+
T Consensus 615 ~~~~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 615 QKGDVEMLCGGPPCQGF 631 (1002)
T ss_dssp CTTTCSEEEECCCCTTC
T ss_pred cCCCeeEEEEcCCCcch
Confidence 22568998876654444
No 321
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.67 E-value=1.1 Score=37.27 Aligned_cols=77 Identities=22% Similarity=0.315 Sum_probs=56.8
Q ss_pred CCCCEEEEEcC-CCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C-
Q 025428 163 LSSWSVLDIGT-GNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E- 228 (253)
Q Consensus 163 ~~~~~VLDiGc-GtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~- 228 (253)
..++++|=.|+ |.|. ++..|+++|+ +|+.++.++..++...+.+...+-.++.++.+|+.+... .
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 35678888887 5554 4566777787 899999999988888777765554579999999987531 0
Q ss_pred -CCccEEEEcccc
Q 025428 229 -RQFQLVMDKGTL 240 (253)
Q Consensus 229 -~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 99 ~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 AGRLDVLVNNAGL 111 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCcEEEECCCc
Confidence 467998876643
No 322
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=90.57 E-value=0.42 Score=42.35 Aligned_cols=46 Identities=33% Similarity=0.367 Sum_probs=38.2
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
+..++.+||-+|+|. |.++..+++. |+.+|+++|.+++.++.+++.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 346788999999986 8888888876 776799999999999888764
No 323
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=90.53 E-value=0.46 Score=46.70 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=36.7
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcC------CCcEEEEeCCHHHHHHHHHHH
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQG------FSDLTGVDYSEDAINLAQSLA 207 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g------~~~v~gvD~s~~~l~~ar~~~ 207 (253)
+..+|||+.||.|.++.-|...| +.-+.++|+++.+++.-+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 34589999999999998887765 557889999999998888774
No 324
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=89.61 E-value=2 Score=35.82 Aligned_cols=74 Identities=19% Similarity=0.209 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------C
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------E 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~ 228 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+... -
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467789988887664 4566667787 899999999988888777766553 78999999987531 1
Q ss_pred CCccEEEEcc
Q 025428 229 RQFQLVMDKG 238 (253)
Q Consensus 229 ~~fD~Vi~~~ 238 (253)
+..|+++.+.
T Consensus 87 g~id~lv~nA 96 (264)
T 3ucx_A 87 GRVDVVINNA 96 (264)
T ss_dssp SCCSEEEECC
T ss_pred CCCcEEEECC
Confidence 4789988765
No 325
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=89.39 E-value=1.3 Score=37.39 Aligned_cols=76 Identities=13% Similarity=0.144 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC-cC-----------C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT-KL-----------E 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~-~~-----------~ 228 (253)
.+++||=.|++.|. ++..|+++|+ +|+.++.++..++.+.+.+...+-.++.++.+|+.+. .. .
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 56678877766543 3445556677 9999999998888777777665545799999999886 20 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 90 g~iD~lv~nAg~ 101 (311)
T 3o26_A 90 GKLDILVNNAGV 101 (311)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 478999987654
No 326
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=89.19 E-value=0.58 Score=41.84 Aligned_cols=45 Identities=18% Similarity=0.150 Sum_probs=37.4
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
+..++.+||-+|+|. |.++..+++. |+.+|+++|.+++.++.+++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 446788999999875 8888888886 76689999999999988875
No 327
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.99 E-value=1.9 Score=36.98 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=56.3
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------ 228 (253)
..+++||=.|++.|. ++..|+++|+ +|+.++.+++.++.+.+.+...+. ++.++.+|+.+... .
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 366789988877653 3455666677 899999999998888877766653 78999999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 107 g~id~lvnnAg~ 118 (301)
T 3tjr_A 107 GGVDVVFSNAGI 118 (301)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 478998877543
No 328
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=88.86 E-value=1.9 Score=35.49 Aligned_cols=75 Identities=16% Similarity=0.271 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.+|.+++.++...+.+...+ .++.++.+|+.+... . +
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADG-GTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 56788888876553 3555556677 89999999998888877776555 368899999987531 0 3
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 78998876643
No 329
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=88.72 E-value=0.72 Score=34.89 Aligned_cols=64 Identities=13% Similarity=0.206 Sum_probs=43.7
Q ss_pred CCEEEEEcCCC-cHH-HHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----C-CCccEEEE
Q 025428 165 SWSVLDIGTGN-GLL-LQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----E-RQFQLVMD 236 (253)
Q Consensus 165 ~~~VLDiGcGt-G~~-~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----~-~~fD~Vi~ 236 (253)
..+|+=+|||. |.. +..|.+.|. .|+++|.+++.++.+++ . .+.++.+|..+... . ..+|+|+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~----~---g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE----R---GVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----T---TCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH----c---CCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 35788899863 332 333334466 89999999998887764 2 45788999876531 2 46888875
No 330
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=88.71 E-value=0.68 Score=40.79 Aligned_cols=45 Identities=22% Similarity=0.288 Sum_probs=37.0
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
...++.+||-+|+|. |.++..+++. |+.+|+++|.+++.++.+++
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 346788999999875 8888888876 66689999999998888765
No 331
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=88.43 E-value=0.88 Score=38.65 Aligned_cols=76 Identities=18% Similarity=0.250 Sum_probs=58.2
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----------C-
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----------E- 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----------~- 228 (253)
.+++++|=-|++.|. ++..|++.|+ +|+.+|.+++.++.+.+.+...|. ++.++++|+.+... .
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 467888888877665 4566777787 999999999999888887777764 78889999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
++.|+++.+.-+
T Consensus 85 G~iDiLVNNAG~ 96 (255)
T 4g81_D 85 IHVDILINNAGI 96 (255)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 578998887643
No 332
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=88.41 E-value=1.3 Score=36.90 Aligned_cols=75 Identities=12% Similarity=0.110 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C-----CC
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E-----RQ 230 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~-----~~ 230 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+... . +.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 56788888877663 4556666687 899999999888888777766553 78999999987531 1 46
Q ss_pred ccEEEEcccc
Q 025428 231 FQLVMDKGTL 240 (253)
Q Consensus 231 fD~Vi~~~~l 240 (253)
.|+++.+.-+
T Consensus 84 id~lv~nAg~ 93 (252)
T 3h7a_A 84 LEVTIFNVGA 93 (252)
T ss_dssp EEEEEECCCC
T ss_pred ceEEEECCCc
Confidence 7888876543
No 333
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=88.35 E-value=0.72 Score=40.43 Aligned_cols=66 Identities=17% Similarity=0.177 Sum_probs=46.7
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEE
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMD 236 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~ 236 (253)
+..++.+||-+|+|. |.++..+++. |+ +|+++|.+++.++.+++ .|.+.+ + .+... +...+|+|+.
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~~v--~-~~~~~--~~~~~D~vid 240 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALS----MGVKHF--Y-TDPKQ--CKEELDFIIS 240 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHH----TTCSEE--E-SSGGG--CCSCEEEEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHh----cCCCee--c-CCHHH--HhcCCCEEEE
Confidence 446788999999875 7788888876 66 89999999998888765 354332 1 33222 2237888886
No 334
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.21 E-value=2 Score=35.21 Aligned_cols=75 Identities=16% Similarity=0.288 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------CC
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------ER 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~~ 229 (253)
.++++|=.|++.|. ++..|+++|+ +|+.++.++..++...+.++..+. ++.++.+|+.+... .+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45678877765443 3455556677 899999999988888777766653 78999999987531 14
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 82 ~id~li~~Ag~ 92 (247)
T 3lyl_A 82 AIDILVNNAGI 92 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 67988876543
No 335
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=88.15 E-value=1.4 Score=36.90 Aligned_cols=76 Identities=13% Similarity=0.051 Sum_probs=57.2
Q ss_pred CCCCEEEEEcCC----CcH-HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----------
Q 025428 163 LSSWSVLDIGTG----NGL-LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------- 227 (253)
Q Consensus 163 ~~~~~VLDiGcG----tG~-~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------- 227 (253)
.+++++|=-|++ -|. ++..|++.|+ +|+.++.+++.++.+.+.++..+-.++.++++|+.+...
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 468899999853 333 5677778888 899999999888888887776654578899999987521
Q ss_pred C-CCccEEEEccc
Q 025428 228 E-RQFQLVMDKGT 239 (253)
Q Consensus 228 ~-~~fD~Vi~~~~ 239 (253)
. +..|+++.+.-
T Consensus 83 ~~G~iD~lvnnAg 95 (256)
T 4fs3_A 83 DVGNIDGVYHSIA 95 (256)
T ss_dssp HHCCCSEEEECCC
T ss_pred HhCCCCEEEeccc
Confidence 1 57898887654
No 336
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.89 E-value=1.9 Score=36.00 Aligned_cols=76 Identities=17% Similarity=0.192 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E--R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~--~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++.+.+.+...+-.++.++.+|+.+... . +
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 56778877765443 3445556677 899999999988887777766553478999999987531 0 4
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 88 ~id~lvnnAg~ 98 (262)
T 3pk0_A 88 GIDVVCANAGV 98 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78988876543
No 337
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=87.67 E-value=0.97 Score=39.38 Aligned_cols=44 Identities=23% Similarity=0.367 Sum_probs=37.1
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
+..++.+||-+|+|. |.++..+++. |+ +|+++|.+++.++.+++
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR 208 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH
Confidence 336788999999875 8888888887 76 99999999999888765
No 338
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=87.20 E-value=0.97 Score=39.65 Aligned_cols=46 Identities=20% Similarity=0.217 Sum_probs=37.9
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
...++.+||-+|+|. |.++..+++. |+.+|+++|.+++.++.+++.
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh
Confidence 346788999999875 7888888887 666899999999988888764
No 339
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=87.09 E-value=2.3 Score=35.37 Aligned_cols=75 Identities=9% Similarity=0.117 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------CC
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------ER 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~~ 229 (253)
.+++||=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+... -+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 56788877765442 2344555677 899999999988888777766553 78999999987531 14
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68988876544
No 340
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=86.92 E-value=2.6 Score=35.59 Aligned_cols=75 Identities=15% Similarity=0.200 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E--R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~--~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+... . +
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46788888876553 3455666677 899999999988887777765553 78999999987531 1 4
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 101 ~id~lv~nAg~ 111 (279)
T 3sju_A 101 PIGILVNSAGR 111 (279)
T ss_dssp SCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 78988876543
No 341
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=86.83 E-value=2.6 Score=35.03 Aligned_cols=76 Identities=13% Similarity=0.194 Sum_probs=54.6
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------ 228 (253)
..++++|=.|++.|. ++..|++.|+ +|+.+|.+++.++...+.+...+ .++.++.+|+.+... .
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAG-GKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356788877766553 3455556687 89999999988888777776655 378999999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 88 g~id~lv~nAg~ 99 (256)
T 3gaf_A 88 GKITVLVNNAGG 99 (256)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478998876643
No 342
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=86.79 E-value=3.4 Score=34.41 Aligned_cols=77 Identities=17% Similarity=0.100 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHh-cCCCceEEEEeccCCCcC-----------
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANR-DGFSCIKFLVDDVLDTKL----------- 227 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~-~g~~~i~~~~~D~~~~~~----------- 227 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++.+++.++.+.+.+.. .+-.++.++.+|+.+...
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 356788888877653 3555666677 899999999988877776654 333358999999987531
Q ss_pred CCCccEEEEcccc
Q 025428 228 ERQFQLVMDKGTL 240 (253)
Q Consensus 228 ~~~fD~Vi~~~~l 240 (253)
-+..|+++.+.-+
T Consensus 85 ~g~id~lvnnAg~ 97 (265)
T 3lf2_A 85 LGCASILVNNAGQ 97 (265)
T ss_dssp HCSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1468998877654
No 343
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=86.75 E-value=1.2 Score=38.78 Aligned_cols=46 Identities=20% Similarity=0.310 Sum_probs=37.8
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
...++.+||-+|+|. |.++..+++. |..+|+++|.+++.++.+++.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l 215 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV 215 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 456788999999875 8888888876 566999999999999888763
No 344
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=86.28 E-value=2.4 Score=35.72 Aligned_cols=72 Identities=13% Similarity=0.163 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCCcHHHH----HHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------
Q 025428 164 SSWSVLDIGTGNGLLLQ----ELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~----~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------ 228 (253)
.+++||=.|++ |.++. .|+++|+ +|++++.+++.++...+.+...+..++.++.+|+.+... .
T Consensus 27 ~~k~vlITGas-ggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 27 QGKKVIVTGAS-KGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 56788877754 44444 4445577 899999999888777666555454468899999987421 1
Q ss_pred CCccEEEEc
Q 025428 229 RQFQLVMDK 237 (253)
Q Consensus 229 ~~fD~Vi~~ 237 (253)
+..|+++.+
T Consensus 105 g~iD~li~n 113 (286)
T 1xu9_A 105 GGLDMLILN 113 (286)
T ss_dssp TSCSEEEEC
T ss_pred CCCCEEEEC
Confidence 478999876
No 345
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=86.26 E-value=2.7 Score=35.39 Aligned_cols=75 Identities=16% Similarity=0.176 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E--R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~--~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+... . +
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35678877776553 3455566677 899999999988888777766553 68889999987531 1 4
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68988876543
No 346
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=86.19 E-value=1.2 Score=46.49 Aligned_cols=75 Identities=12% Similarity=0.143 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCC-CcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCC-----------------C
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGF-SDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLD-----------------T 225 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~-~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~-----------------~ 225 (253)
...++||+.||.|.++.-|...|+ ..+.++|+++.+++.-+.|. .+..++.+|+.+ +
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~gdi~~~~~~~l 924 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN-----PGTTVFTEDCNVLLKLVMAGEVTNSLGQRL 924 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHTTTCSBCSSCCBC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC-----CCCcEeeccHHHHhHhhhccchhhhhhhhc
Confidence 345899999999999999988886 56889999999998877764 234455555431 1
Q ss_pred cCCCCccEEEEcccccee
Q 025428 226 KLERQFQLVMDKGTLDAI 243 (253)
Q Consensus 226 ~~~~~fD~Vi~~~~l~~i 243 (253)
+..+.+|+|+.......+
T Consensus 925 p~~~~vDvl~GGpPCQ~F 942 (1330)
T 3av4_A 925 PQKGDVEMLCGGPPCQGF 942 (1330)
T ss_dssp CCTTTCSEEEECCCCTTT
T ss_pred cccCccceEEecCCCccc
Confidence 112468988876555444
No 347
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=86.11 E-value=3.2 Score=34.38 Aligned_cols=76 Identities=12% Similarity=0.181 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc--CCCceEEEEeccCCCcC-----------
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRD--GFSCIKFLVDDVLDTKL----------- 227 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~--g~~~i~~~~~D~~~~~~----------- 227 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+... +..++.++.+|+.+...
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 56788888876653 4555666687 8999999999888877766554 32468899999987531
Q ss_pred CCCccEEEEcccc
Q 025428 228 ERQFQLVMDKGTL 240 (253)
Q Consensus 228 ~~~fD~Vi~~~~l 240 (253)
-+..|+++.+.-+
T Consensus 85 ~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 85 YGAVDILVNAAAM 97 (250)
T ss_dssp HCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1478988876643
No 348
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=85.73 E-value=1.3 Score=38.06 Aligned_cols=64 Identities=19% Similarity=0.282 Sum_probs=44.9
Q ss_pred CCCCCEEEEEcCC-CcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEE
Q 025428 162 YLSSWSVLDIGTG-NGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMD 236 (253)
Q Consensus 162 ~~~~~~VLDiGcG-tG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~ 236 (253)
..++.+||-+|+| .|.++..+++. |+ +|++++ +++.++.+++. |.+.+ + .|..++ .+.+|+|+.
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l----Ga~~v--~-~d~~~v--~~g~Dvv~d 205 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR----GVRHL--Y-REPSQV--TQKYFAIFD 205 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH----TEEEE--E-SSGGGC--CSCEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc----CCCEE--E-cCHHHh--CCCccEEEE
Confidence 3678899999996 48888888877 77 999999 99888888764 43221 1 232222 466888774
No 349
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=85.68 E-value=2.4 Score=35.24 Aligned_cols=74 Identities=15% Similarity=0.196 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E--R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~--~ 229 (253)
+++++|=.|++.|. ++..|++.|+ +|+.++.+++.++.+.+.+...+ .++.++.+|+.+... . +
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFP-GQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCST-TCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 56778877765543 3455566677 89999999998888877765544 368999999987531 0 4
Q ss_pred CccEEEEccc
Q 025428 230 QFQLVMDKGT 239 (253)
Q Consensus 230 ~fD~Vi~~~~ 239 (253)
..|+++.+.-
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898887654
No 350
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=85.66 E-value=1.2 Score=39.09 Aligned_cols=46 Identities=26% Similarity=0.282 Sum_probs=38.0
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
+..++.+||-+|+|. |.++..+++. |+..|+++|.+++.++.+++.
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 346788999999875 7788888877 775699999999999999875
No 351
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=85.53 E-value=4.3 Score=33.27 Aligned_cols=73 Identities=15% Similarity=0.127 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCCcHHHHH----HHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------
Q 025428 164 SSWSVLDIGTGNGLLLQE----LSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~----la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------ 228 (253)
.+++||=.|++ |.++.. |+++|+ +|++++.++..++...+.+...+ .++.++.+|+.+... .
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEG-HDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56788877754 545444 445577 89999999887776666555444 268999999987531 1
Q ss_pred CCccEEEEccc
Q 025428 229 RQFQLVMDKGT 239 (253)
Q Consensus 229 ~~fD~Vi~~~~ 239 (253)
+..|+|+.+..
T Consensus 89 ~~id~vi~~Ag 99 (260)
T 3awd_A 89 GRVDILVACAG 99 (260)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36898887654
No 352
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=85.49 E-value=2.7 Score=34.06 Aligned_cols=68 Identities=15% Similarity=0.167 Sum_probs=44.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHH----hcCCCcEEEEeCCHHHHHHHHHHHHhcCCCce-EEEEeccCCCcCC--CCccEEE
Q 025428 163 LSSWSVLDIGTGNGLLLQELS----KQGFSDLTGVDYSEDAINLAQSLANRDGFSCI-KFLVDDVLDTKLE--RQFQLVM 235 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la----~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i-~~~~~D~~~~~~~--~~fD~Vi 235 (253)
..+++||=.| |+|.++..++ +.|+ +|++++.++..++.... .++ +++.+|+.+.... +..|+|+
T Consensus 19 l~~~~ilVtG-atG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~D~vi 89 (236)
T 3e8x_A 19 FQGMRVLVVG-ANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRE-------RGASDIVVANLEEDFSHAFASIDAVV 89 (236)
T ss_dssp --CCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH-------TTCSEEEECCTTSCCGGGGTTCSEEE
T ss_pred cCCCeEEEEC-CCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHh-------CCCceEEEcccHHHHHHHHcCCCEEE
Confidence 3567888777 4566555554 4476 99999999876554332 257 8999999722111 5689988
Q ss_pred Eccc
Q 025428 236 DKGT 239 (253)
Q Consensus 236 ~~~~ 239 (253)
.+..
T Consensus 90 ~~ag 93 (236)
T 3e8x_A 90 FAAG 93 (236)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 7543
No 353
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=85.33 E-value=3.9 Score=34.16 Aligned_cols=77 Identities=19% Similarity=0.259 Sum_probs=54.0
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCC------------HHHHHHHHHHHHhcCCCceEEEEeccCCCcC
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYS------------EDAINLAQSLANRDGFSCIKFLVDDVLDTKL 227 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s------------~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~ 227 (253)
..++++|=.|++.|. ++..|++.|+ +|+.+|.+ ++.++...+.+...+. ++.++.+|+.+...
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRDRES 88 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCCHHH
Confidence 366788888876553 4556666777 89999987 6777666666555553 78999999987531
Q ss_pred -----C------CCccEEEEccccc
Q 025428 228 -----E------RQFQLVMDKGTLD 241 (253)
Q Consensus 228 -----~------~~fD~Vi~~~~l~ 241 (253)
. +..|+++.+.-+.
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 1 4789988776543
No 354
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=85.29 E-value=4.5 Score=33.27 Aligned_cols=75 Identities=13% Similarity=0.176 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+... . +
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 45788888865442 3445555677 899999999888776666655443 68899999987531 0 4
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 84 ~id~lv~nAg~ 94 (247)
T 2jah_A 84 GLDILVNNAGI 94 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876543
No 355
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=85.24 E-value=3.1 Score=34.61 Aligned_cols=62 Identities=16% Similarity=0.202 Sum_probs=45.6
Q ss_pred CEEEEEcCCCcHHHHHHHhc----CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEcc
Q 025428 166 WSVLDIGTGNGLLLQELSKQ----GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKG 238 (253)
Q Consensus 166 ~~VLDiGcGtG~~~~~la~~----g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~ 238 (253)
.+||=.|+ |.++..+++. |+ +|++++.++........ .+++++.+|+.++. -..+|+|+...
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~-~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS-LDGVTHLLIST 71 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC-CTTCCEEEECC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhh-------CCCeEEEecccccc-cCCCCEEEECC
Confidence 58999994 8887776654 66 89999999865543332 26899999998865 45678887644
No 356
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=85.22 E-value=3.6 Score=34.86 Aligned_cols=75 Identities=17% Similarity=0.198 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------CC
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------ER 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+ .++.++.+|+.+... -+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAG-GQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 56788888876553 3455566677 99999999988887777665544 268899999987531 14
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78998876654
No 357
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=85.11 E-value=3.4 Score=33.77 Aligned_cols=77 Identities=10% Similarity=0.195 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecc--CCCc-----C-----
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDV--LDTK-----L----- 227 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~--~~~~-----~----- 227 (253)
.+++++|=.|++.|. ++..|+++|+ +|+.++.++..++...+.+...+..++.++..|+ .+.. .
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 356788877765443 3455556677 8999999999998888877766655678888887 3321 0
Q ss_pred C-CCccEEEEcccc
Q 025428 228 E-RQFQLVMDKGTL 240 (253)
Q Consensus 228 ~-~~fD~Vi~~~~l 240 (253)
. +..|+++.+..+
T Consensus 91 ~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 91 EFGRLDGLLHNASI 104 (247)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 0 368988876543
No 358
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=84.98 E-value=4.1 Score=34.23 Aligned_cols=77 Identities=17% Similarity=0.185 Sum_probs=54.9
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEEeccCCCcC----------
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS--CIKFLVDDVLDTKL---------- 227 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~--~i~~~~~D~~~~~~---------- 227 (253)
..++++|=.|++.|. ++..|++.|+ +|+.+|.+++.++...+.+...+.. ++.++.+|+.+...
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 356788888876553 3455666677 8999999999888877777655432 68899999987531
Q ss_pred -CCCccEEEEcccc
Q 025428 228 -ERQFQLVMDKGTL 240 (253)
Q Consensus 228 -~~~fD~Vi~~~~l 240 (253)
-+..|+++.+.-.
T Consensus 88 ~~g~id~lv~nAg~ 101 (281)
T 3svt_A 88 WHGRLHGVVHCAGG 101 (281)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 1467988876643
No 359
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=84.95 E-value=1.8 Score=37.09 Aligned_cols=76 Identities=17% Similarity=0.185 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E--R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~--~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+..++.++.+|+.+... . +
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 56778877765543 3455566677 999999999888877777665554478999999987531 1 4
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 119 ~iD~lvnnAg~ 129 (293)
T 3rih_A 119 ALDVVCANAGI 129 (293)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 67988876543
No 360
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=84.95 E-value=4.3 Score=35.04 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcC-----------C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKL-----------E 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~-----------~ 228 (253)
.+++||=.|++.|. ++..|+++|+ +|++++.+++.++.+.+.+...+.. ++.++.+|+.+... -
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 56789988877654 3455666687 8999999999888887776655432 68999999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 467988877654
No 361
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=84.92 E-value=4.5 Score=33.80 Aligned_cols=75 Identities=19% Similarity=0.188 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCC------------HHHHHHHHHHHHhcCCCceEEEEeccCCCcC-
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYS------------EDAINLAQSLANRDGFSCIKFLVDDVLDTKL- 227 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s------------~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~- 227 (253)
.++++|=.|++.|. ++..|+++|+ +|+.+|.+ ...++.+...+...+ .++.++.+|+.+...
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-RKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-SCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcC-CceEEEEccCCCHHHH
Confidence 56788888876553 3455666677 89999987 777777766665555 378999999987531
Q ss_pred ----C------CCccEEEEcccc
Q 025428 228 ----E------RQFQLVMDKGTL 240 (253)
Q Consensus 228 ----~------~~fD~Vi~~~~l 240 (253)
. +..|+++.+.-+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGI 109 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCc
Confidence 1 478998887654
No 362
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=84.91 E-value=4.6 Score=33.70 Aligned_cols=73 Identities=14% Similarity=0.075 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCCcHHHHHH----HhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------C
Q 025428 164 SSWSVLDIGTGNGLLLQEL----SKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------E 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~l----a~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~ 228 (253)
.+++||=.|++ |.++..+ ++.|+ +|++++.++..++...+.++..+. ++.++.+|+.+... -
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 56788877755 4555444 45576 899999999888776666655443 78999999987531 1
Q ss_pred CCccEEEEccc
Q 025428 229 RQFQLVMDKGT 239 (253)
Q Consensus 229 ~~fD~Vi~~~~ 239 (253)
+.+|+|+.+..
T Consensus 107 g~iD~li~~Ag 117 (272)
T 1yb1_A 107 GDVSILVNNAG 117 (272)
T ss_dssp CCCSEEEECCC
T ss_pred CCCcEEEECCC
Confidence 36899887654
No 363
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=84.89 E-value=4.5 Score=34.43 Aligned_cols=76 Identities=18% Similarity=0.223 Sum_probs=54.3
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCC------------HHHHHHHHHHHHhcCCCceEEEEeccCCCcC
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYS------------EDAINLAQSLANRDGFSCIKFLVDDVLDTKL 227 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s------------~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~ 227 (253)
..++++|=.|++.|. ++..|++.|+ +|+.+|.+ ++.++...+.+...+. ++.++.+|+.+...
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRDFDA 103 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHH
Confidence 367788888877664 4556666777 89999987 6677766666655553 78999999987531
Q ss_pred ----------C-CCccEEEEcccc
Q 025428 228 ----------E-RQFQLVMDKGTL 240 (253)
Q Consensus 228 ----------~-~~fD~Vi~~~~l 240 (253)
. +..|+++.+.-+
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 1 478998876644
No 364
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=84.84 E-value=3.3 Score=34.26 Aligned_cols=77 Identities=14% Similarity=0.208 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecc--CCCc-----C-----
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDV--LDTK-----L----- 227 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~--~~~~-----~----- 227 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+-.++.++..|+ .+.. +
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 366788888876553 3455666677 8999999998888777666554433688999998 4431 0
Q ss_pred -CCCccEEEEcccc
Q 025428 228 -ERQFQLVMDKGTL 240 (253)
Q Consensus 228 -~~~fD~Vi~~~~l 240 (253)
-+..|+++.+.-+
T Consensus 89 ~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 89 NYPRLDGVLHNAGL 102 (252)
T ss_dssp HCSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 1478998876643
No 365
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=84.76 E-value=4.5 Score=33.94 Aligned_cols=76 Identities=20% Similarity=0.232 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeC-------------CHHHHHHHHHHHHhcCCCceEEEEeccCCCc
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDY-------------SEDAINLAQSLANRDGFSCIKFLVDDVLDTK 226 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~-------------s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~ 226 (253)
..++++|=.|++.|. ++..|++.|+ +|+.+|. +++.++...+.+...+. ++.++.+|+.+..
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRDDA 90 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHH
Confidence 367788888877654 4556666777 8999998 67777777776665553 7889999998753
Q ss_pred C-----------CCCccEEEEcccc
Q 025428 227 L-----------ERQFQLVMDKGTL 240 (253)
Q Consensus 227 ~-----------~~~fD~Vi~~~~l 240 (253)
. -+..|+++.+.-+
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 1 1478988876543
No 366
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=84.73 E-value=2.7 Score=35.54 Aligned_cols=76 Identities=14% Similarity=0.141 Sum_probs=55.2
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------ 228 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+... .
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467788888876553 3455666677 899999999888877777666553 78899999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 108 g~iD~lvnnAg~ 119 (276)
T 3r1i_A 108 GGIDIAVCNAGI 119 (276)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378998876643
No 367
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=84.55 E-value=4.8 Score=33.79 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------CC
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------ER 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|++++.+++.++...+.+...+. ++.++.+|+.+... -+
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 56788888865442 3444555677 899999999887766666554443 68899999987531 14
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 99 ~iD~lv~~Ag~ 109 (277)
T 2rhc_B 99 PVDVLVNNAGR 109 (277)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876543
No 368
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=84.49 E-value=5 Score=33.55 Aligned_cols=75 Identities=15% Similarity=0.308 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc------------CC
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK------------LE 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~------------~~ 228 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+.. +.
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56788888865443 3444555677 899999999887776666554443 6889999997753 11
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 98 g~id~lv~nAg~ 109 (273)
T 1ae1_A 98 GKLNILVNNAGV 109 (273)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 578988876643
No 369
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=84.48 E-value=4.6 Score=33.90 Aligned_cols=76 Identities=17% Similarity=0.251 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCC----------------HHHHHHHHHHHHhcCCCceEEEEeccC
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYS----------------EDAINLAQSLANRDGFSCIKFLVDDVL 223 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s----------------~~~l~~ar~~~~~~g~~~i~~~~~D~~ 223 (253)
..++++|=.|++.|. ++..|++.|+ +|+.+|.+ ++.++...+.+...+ .++.++.+|+.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~ 86 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-RRIVTAEVDVR 86 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-CCEEEEECCTT
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-CceEEEEcCCC
Confidence 367789988887664 4566666777 89999987 666766666555544 37899999998
Q ss_pred CCcC---------C--CCccEEEEcccc
Q 025428 224 DTKL---------E--RQFQLVMDKGTL 240 (253)
Q Consensus 224 ~~~~---------~--~~fD~Vi~~~~l 240 (253)
+... . +..|+++.+.-+
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 7531 1 478998877644
No 370
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.36 E-value=2 Score=33.62 Aligned_cols=65 Identities=26% Similarity=0.390 Sum_probs=41.4
Q ss_pred CCCEEEEEcCCC-cHH-HHHHHhc-CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc----C-C-CCccEE
Q 025428 164 SSWSVLDIGTGN-GLL-LQELSKQ-GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK----L-E-RQFQLV 234 (253)
Q Consensus 164 ~~~~VLDiGcGt-G~~-~~~la~~-g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~----~-~-~~fD~V 234 (253)
.+.+|+=+|||. |.. +..|.+. |. +|+++|.+++.++.+++ .| +.++.+|..+.. . . ..+|+|
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~----~g---~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRS----EG---RNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHH----TT---CCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHH----CC---CCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 356888888762 322 3334445 66 89999999988776553 23 456777765421 1 2 468888
Q ss_pred EE
Q 025428 235 MD 236 (253)
Q Consensus 235 i~ 236 (253)
+.
T Consensus 110 i~ 111 (183)
T 3c85_A 110 LL 111 (183)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 371
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=84.36 E-value=1.6 Score=38.74 Aligned_cols=46 Identities=22% Similarity=0.250 Sum_probs=37.8
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
...++.+||-+|+|. |.++..+++. |+.+|+++|.+++.++.+++.
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 226 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV 226 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 346788999999875 7778888876 776899999999998888764
No 372
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=84.31 E-value=4.8 Score=33.26 Aligned_cols=75 Identities=15% Similarity=0.301 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc------------CC
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK------------LE 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~------------~~ 228 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+.. +.
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 56788877765442 3444555677 899999999887766665554442 6888999998752 11
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 86 g~id~lv~~Ag~ 97 (260)
T 2ae2_A 86 GKLNILVNNAGI 97 (260)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 568998876643
No 373
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=84.26 E-value=4.6 Score=33.55 Aligned_cols=75 Identities=21% Similarity=0.277 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc--CCCceEEEEeccCCCcC-----C-----
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRD--GFSCIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~--g~~~i~~~~~D~~~~~~-----~----- 228 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+... + .++.++.+|+.+... .
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPD-AEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTT-CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56788888865542 3445556677 8999999998877666555433 3 368899999987531 1
Q ss_pred -CCccEEEEcccc
Q 025428 229 -RQFQLVMDKGTL 240 (253)
Q Consensus 229 -~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 90 ~g~id~lv~nAg~ 102 (267)
T 1iy8_A 90 FGRIDGFFNNAGI 102 (267)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 367998876543
No 374
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=84.16 E-value=5.2 Score=33.17 Aligned_cols=75 Identities=16% Similarity=0.275 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E--R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~--~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+... . +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 56788877765543 3445555677 899999999887776666554442 68899999987531 0 4
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876543
No 375
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=84.12 E-value=7.2 Score=33.04 Aligned_cols=75 Identities=17% Similarity=0.193 Sum_probs=47.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHH----hcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEE-EeccCCCcC-C---CCccE
Q 025428 163 LSSWSVLDIGTGNGLLLQELS----KQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFL-VDDVLDTKL-E---RQFQL 233 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~~~~~la----~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~-~~D~~~~~~-~---~~fD~ 233 (253)
.++.+||=.| |+|.++..++ +.|+ +|++++.++...+...+.+....-.+++++ .+|+.+... . ..+|+
T Consensus 9 ~~~~~vlVTG-atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 9 PEGSLVLVTG-ANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp CTTCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCCEEEEEC-CccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence 3567888776 4566665554 4466 899999998766554443322111368888 799877531 1 36788
Q ss_pred EEEccc
Q 025428 234 VMDKGT 239 (253)
Q Consensus 234 Vi~~~~ 239 (253)
|+....
T Consensus 87 vih~A~ 92 (342)
T 1y1p_A 87 VAHIAS 92 (342)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 886554
No 376
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=84.07 E-value=3.4 Score=34.72 Aligned_cols=76 Identities=17% Similarity=0.244 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------ 228 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+... .
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGL-EGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 356678877765543 3455566677 899999999888877777666553 67889999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 104 g~iD~lvnnAg~ 115 (270)
T 3ftp_A 104 GALNVLVNNAGI 115 (270)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468988876643
No 377
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=83.79 E-value=4.2 Score=33.68 Aligned_cols=76 Identities=13% Similarity=0.059 Sum_probs=53.7
Q ss_pred CCCEEEEEcCC--CcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C-----
Q 025428 164 SSWSVLDIGTG--NGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 164 ~~~~VLDiGcG--tG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~----- 228 (253)
.++++|=.|++ .|. ++..|++.|+ +|+.++.++...+.+.+.....+-.++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 56789989876 333 4666777787 899999998766666666555443368999999988641 0
Q ss_pred -CCccEEEEcccc
Q 025428 229 -RQFQLVMDKGTL 240 (253)
Q Consensus 229 -~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 85 ~g~id~li~~Ag~ 97 (266)
T 3oig_A 85 VGVIHGIAHCIAF 97 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCeeEEEEcccc
Confidence 468888876543
No 378
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=83.68 E-value=2.6 Score=35.64 Aligned_cols=76 Identities=20% Similarity=0.275 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E--R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~--~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+-..+.++.+|+.+... . +
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 56778877765543 3445556677 899999999888777766654433346899999987531 1 4
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 111 ~iD~lvnnAG~ 121 (281)
T 4dry_A 111 RLDLLVNNAGS 121 (281)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 67998876643
No 379
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=83.48 E-value=1.2 Score=39.31 Aligned_cols=45 Identities=24% Similarity=0.223 Sum_probs=36.4
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
+..++.+||-+|+|. |.++..+++. |+.+|+++|.+++.++.+++
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 346788999999874 7777888876 77689999999998888765
No 380
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=83.15 E-value=4.6 Score=32.68 Aligned_cols=74 Identities=16% Similarity=0.206 Sum_probs=50.6
Q ss_pred CCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHH-hcCCCceEEEEeccCCCc-----CC------C
Q 025428 165 SWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLAN-RDGFSCIKFLVDDVLDTK-----LE------R 229 (253)
Q Consensus 165 ~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~-~~g~~~i~~~~~D~~~~~-----~~------~ 229 (253)
++++|=.|++.|. ++..|+++|+ +|+.++.+++.++...+.+. ..+ .++.++.+|+.+.. +. +
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcC-CeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 3567777765442 3445555677 89999999988877766554 334 37899999998753 11 3
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 80 ~id~li~~Ag~ 90 (235)
T 3l77_A 80 DVDVVVANAGL 90 (235)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 78998877654
No 381
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=83.09 E-value=1 Score=39.98 Aligned_cols=45 Identities=29% Similarity=0.350 Sum_probs=36.9
Q ss_pred cCCCCCEEEEEcCC-CcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTG-NGLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGcG-tG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
...++.+||-+|+| .|.++..+++. |+.+|+++|.+++.++.+++
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 34678899999987 47888888877 77789999999998888765
No 382
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=83.00 E-value=1.3 Score=39.18 Aligned_cols=45 Identities=22% Similarity=0.226 Sum_probs=36.2
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
...++.+||-+|+|. |.++..+++. |+.+|+++|.+++.++.+++
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 346788999999864 7777888876 66589999999998888775
No 383
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=82.94 E-value=3.6 Score=34.34 Aligned_cols=75 Identities=12% Similarity=0.211 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHh-cCCCceEEEEeccCCCcC---------C--
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANR-DGFSCIKFLVDDVLDTKL---------E-- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~-~g~~~i~~~~~D~~~~~~---------~-- 228 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++.+.+.+.. .+ .++.++.+|+.+... .
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFG-TDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56788877766553 3455566677 899999999888877766654 34 378999999988641 0
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 97 g~id~lv~nAg~ 108 (266)
T 4egf_A 97 GGLDVLVNNAGI 108 (266)
T ss_dssp TSCSEEEEECCC
T ss_pred CCCCEEEECCCc
Confidence 478988876543
No 384
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=82.89 E-value=5.8 Score=32.77 Aligned_cols=75 Identities=16% Similarity=0.198 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc-CCCceEEEEeccCCCcC-----C------
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRD-GFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~-g~~~i~~~~~D~~~~~~-----~------ 228 (253)
.++++|=.|++.|. ++..|+++|+ +|++++.+++.++...+.+... + .++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFG-VRVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45678877765442 3444555677 8999999998776665554433 4 268899999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 84 g~id~lv~~Ag~ 95 (263)
T 3ai3_A 84 GGADILVNNAGT 95 (263)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368988876543
No 385
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=82.88 E-value=8.1 Score=28.06 Aligned_cols=64 Identities=16% Similarity=0.153 Sum_probs=40.1
Q ss_pred CCEEEEEcCCCcHHHHHHH----hcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc----C-CCCccEEE
Q 025428 165 SWSVLDIGTGNGLLLQELS----KQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK----L-ERQFQLVM 235 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la----~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~----~-~~~fD~Vi 235 (253)
+.+|+=+|+ |.++..++ +.|. +|+++|.+++.++..++. . ++.++.+|..+.. . -..+|+|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~---~---~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAE---I---DALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH---C---SSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHh---c---CcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 357888887 55544443 4465 899999999877655432 1 3456777765432 1 24688888
Q ss_pred Ec
Q 025428 236 DK 237 (253)
Q Consensus 236 ~~ 237 (253)
..
T Consensus 75 ~~ 76 (140)
T 1lss_A 75 AV 76 (140)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 386
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=82.85 E-value=1.9 Score=37.65 Aligned_cols=44 Identities=25% Similarity=0.240 Sum_probs=35.6
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
+..++.+||-+|+|. |.++..+++. |+ +|+++|.+++.++.+++
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKN 210 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHH
Confidence 346788999999874 7777788776 66 69999999998888875
No 387
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=82.82 E-value=1.4 Score=38.87 Aligned_cols=46 Identities=28% Similarity=0.322 Sum_probs=36.8
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
+..++.+||-+|+|. |.++..+++. |+.+|+++|.+++.++.+++.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l 234 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF 234 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence 346788999999874 7777777776 776899999999988888753
No 388
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=82.68 E-value=1.4 Score=35.03 Aligned_cols=43 Identities=16% Similarity=0.131 Sum_probs=32.6
Q ss_pred CCCCCEEEEEcC--CCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 162 YLSSWSVLDIGT--GNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 162 ~~~~~~VLDiGc--GtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
..++.+||..|+ |.|..+..++.. |+ +|+++|.+++.++.+++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR 81 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 357789999994 567666666654 76 89999999988776653
No 389
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=82.67 E-value=2.3 Score=35.81 Aligned_cols=76 Identities=13% Similarity=0.150 Sum_probs=54.5
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------C
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------E 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~ 228 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+... -
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 366788877765543 3455566677 899999999988887777766553 78899999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 102 g~iD~lv~nAg~ 113 (271)
T 4ibo_A 102 IDVDILVNNAGI 113 (271)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468998876643
No 390
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=82.63 E-value=6.6 Score=32.81 Aligned_cols=76 Identities=18% Similarity=0.234 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeC-------------CHHHHHHHHHHHHhcCCCceEEEEeccCCCc
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDY-------------SEDAINLAQSLANRDGFSCIKFLVDDVLDTK 226 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~-------------s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~ 226 (253)
..++++|=.|++.|. ++..|++.|+ +|+.+|. +++.++...+.+...+. ++.++.+|+.+..
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRDFD 86 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHH
Confidence 356788888876654 4556666777 8999998 67777776666655553 7889999998753
Q ss_pred C----------C-CCccEEEEcccc
Q 025428 227 L----------E-RQFQLVMDKGTL 240 (253)
Q Consensus 227 ~----------~-~~fD~Vi~~~~l 240 (253)
. . +..|+++.+.-+
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 1 0 468988876643
No 391
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=82.61 E-value=2 Score=38.49 Aligned_cols=46 Identities=30% Similarity=0.276 Sum_probs=37.2
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
...++.+||=+|+|. |.++..+++. |+.+|+++|.+++.++.+++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 346788999999864 7777777776 776899999999999988764
No 392
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=82.46 E-value=6.1 Score=33.57 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------CC
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------ER 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+ .++.++.+|+.+... -+
T Consensus 33 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (291)
T 3cxt_A 33 KGKIALVTGASYGIGFAIASAYAKAGA-TIVFNDINQELVDRGMAAYKAAG-INAHGYVCDVTDEDGIQAMVAQIESEVG 110 (291)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 56788888865442 2344555677 89999999988776666555444 268889999987531 14
Q ss_pred CccEEEEccc
Q 025428 230 QFQLVMDKGT 239 (253)
Q Consensus 230 ~fD~Vi~~~~ 239 (253)
..|+++.+.-
T Consensus 111 ~iD~lvnnAg 120 (291)
T 3cxt_A 111 IIDILVNNAG 120 (291)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 6899887654
No 393
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=82.30 E-value=4.6 Score=33.91 Aligned_cols=75 Identities=15% Similarity=0.139 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHh-cCCCceEEEEeccCCCcC---------C-
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANR-DGFSCIKFLVDDVLDTKL---------E- 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~-~g~~~i~~~~~D~~~~~~---------~- 228 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++.+.+.++...+.+.. .+ .++.++.+|+.+... .
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATG-RRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 356788888876553 3455566677 999999998877666555533 23 378999999987531 1
Q ss_pred -CCccEEEEccc
Q 025428 229 -RQFQLVMDKGT 239 (253)
Q Consensus 229 -~~fD~Vi~~~~ 239 (253)
+..|+++.+.-
T Consensus 103 ~g~id~lv~nAg 114 (277)
T 4fc7_A 103 FGRIDILINCAA 114 (277)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 47898887664
No 394
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=82.26 E-value=8.6 Score=33.39 Aligned_cols=77 Identities=9% Similarity=0.047 Sum_probs=57.7
Q ss_pred CEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC---CceEEEEeccCCCc--------CC-CCccE
Q 025428 166 WSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF---SCIKFLVDDVLDTK--------LE-RQFQL 233 (253)
Q Consensus 166 ~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~---~~i~~~~~D~~~~~--------~~-~~fD~ 233 (253)
..||+||||-=.....+......+++=+| .|..++..++.+...+. .+..++.+|+.+-. ++ ...-+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~ 182 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTA 182 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCEE
Confidence 57999999988887777632124899999 59999999999875432 36889999998721 11 34567
Q ss_pred EEEcccccee
Q 025428 234 VMDKGTLDAI 243 (253)
Q Consensus 234 Vi~~~~l~~i 243 (253)
+++-++|+++
T Consensus 183 ~i~Egvl~Yl 192 (310)
T 2uyo_A 183 WLAEGLLMYL 192 (310)
T ss_dssp EEECSCGGGS
T ss_pred EEEechHhhC
Confidence 8889999987
No 395
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=82.17 E-value=2.2 Score=37.50 Aligned_cols=45 Identities=22% Similarity=0.270 Sum_probs=36.6
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
+..++.+||-+|+|. |.++..+++. |+ +|+++|.+++.++.+++.
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l 232 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFAL 232 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHc
Confidence 346788999999874 7777788876 66 999999999988887764
No 396
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=82.12 E-value=1.5 Score=38.83 Aligned_cols=45 Identities=27% Similarity=0.330 Sum_probs=36.1
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
...++.+||-+|+|. |.++..+++. |+.+|+++|.+++.++.+++
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 346788999999874 7777788776 66589999999998888764
No 397
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=82.09 E-value=7 Score=32.66 Aligned_cols=75 Identities=17% Similarity=0.215 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCC------------HHHHHHHHHHHHhcCCCceEEEEeccCCCcC-
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYS------------EDAINLAQSLANRDGFSCIKFLVDDVLDTKL- 227 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s------------~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~- 227 (253)
.++++|=.|++.|. ++..|++.|+ +|+.+|.+ .+.++...+.+...+ .++.++.+|+.+...
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTG-RRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcC-CeEEEEeCCCCCHHHH
Confidence 56788888876653 3555666677 89999997 666666665555555 378999999987531
Q ss_pred ----C------CCccEEEEcccc
Q 025428 228 ----E------RQFQLVMDKGTL 240 (253)
Q Consensus 228 ----~------~~fD~Vi~~~~l 240 (253)
. +..|+++.+.-+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCC
Confidence 1 478998876654
No 398
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=82.08 E-value=2.4 Score=35.91 Aligned_cols=74 Identities=14% Similarity=0.156 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----------C-C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----------E-R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----------~-~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+ .++.++.+|+.+... . +
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGG-GEAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTT-CCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56788887876553 3455666677 89999999998887777665444 368899999987531 1 4
Q ss_pred CccEEEEccc
Q 025428 230 QFQLVMDKGT 239 (253)
Q Consensus 230 ~fD~Vi~~~~ 239 (253)
..|+++.+.-
T Consensus 85 ~iD~lvnnAg 94 (280)
T 3tox_A 85 GLDTAFNNAG 94 (280)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898887654
No 399
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=82.08 E-value=6.9 Score=32.91 Aligned_cols=76 Identities=14% Similarity=0.252 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeC-CHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C-----
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDY-SEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~-s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~----- 228 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++. +++.++...+.+...+. ++.++.+|+.+... .
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 356788888876653 4555666677 8999995 77777776666655553 78999999988641 1
Q ss_pred -CCccEEEEcccc
Q 025428 229 -RQFQLVMDKGTL 240 (253)
Q Consensus 229 -~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 378998876644
No 400
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=82.06 E-value=2.8 Score=35.40 Aligned_cols=76 Identities=14% Similarity=0.196 Sum_probs=53.8
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C-----C
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E-----R 229 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~-----~ 229 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+ .++.++.+|+.+... . +
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASG-GTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTT-CCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 366788877766543 3455556677 89999999888777777666555 378999999987631 0 4
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 109 ~iD~lvnnAg~ 119 (275)
T 4imr_A 109 PVDILVINASA 119 (275)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68988876643
No 401
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.02 E-value=5.1 Score=33.59 Aligned_cols=76 Identities=17% Similarity=0.279 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEEeccCCCcC-----C-----
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS--CIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~--~i~~~~~D~~~~~~-----~----- 228 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+.. ++.++.+|+.+... .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 45677777755442 3444555677 8999999998887766665544421 68899999987531 1
Q ss_pred -CCccEEEEcccc
Q 025428 229 -RQFQLVMDKGTL 240 (253)
Q Consensus 229 -~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 84 ~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 84 FGKIDVLVNNAGA 96 (280)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 368999877643
No 402
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=81.76 E-value=1.5 Score=38.72 Aligned_cols=45 Identities=22% Similarity=0.205 Sum_probs=36.1
Q ss_pred cCCCCCEEEEEcCC-CcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTG-NGLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGcG-tG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
...++.+||-+|+| .|.++..+++. |+.+|+++|.+++.++.+++
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 34678899999987 47777788876 66689999999998888765
No 403
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=81.75 E-value=4.8 Score=33.27 Aligned_cols=72 Identities=13% Similarity=0.103 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCCcHHHH----HHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC------------
Q 025428 164 SSWSVLDIGTGNGLLLQ----ELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL------------ 227 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~----~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~------------ 227 (253)
.++++|=.|++ |.++. .|++.|+ +|+.++.+++.++...+.+...+ .++.++.+|+.+...
T Consensus 4 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 4 NGQVCVVTGAS-RGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLG-GQCVPVVCDSSQESEVRSLFEQVDREQ 80 (260)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHS-SEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcC-CceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 45677777754 44444 4455577 89999999988776666554444 368899999987520
Q ss_pred CCCccEEEEcc
Q 025428 228 ERQFQLVMDKG 238 (253)
Q Consensus 228 ~~~fD~Vi~~~ 238 (253)
.+..|+++.+.
T Consensus 81 ~g~id~lvnnA 91 (260)
T 2qq5_A 81 QGRLDVLVNNA 91 (260)
T ss_dssp TTCCCEEEECC
T ss_pred CCCceEEEECC
Confidence 24679988876
No 404
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=81.70 E-value=1.7 Score=39.54 Aligned_cols=62 Identities=18% Similarity=0.221 Sum_probs=43.9
Q ss_pred CCEEEEEcCCCcHHHHHHH----hcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----C-CCccEEE
Q 025428 165 SWSVLDIGTGNGLLLQELS----KQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----E-RQFQLVM 235 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la----~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----~-~~fD~Vi 235 (253)
..+|+=+|+| .++..++ ..|. .|+++|.+++.++.+++ . .+.++.||..+... . ...|+|+
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~----~---g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGV-KMVVLDHDPDHIETLRK----F---GMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHH----T---TCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHh----C---CCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 3578888875 4444444 3466 89999999999988874 2 45688999987531 2 5688877
Q ss_pred E
Q 025428 236 D 236 (253)
Q Consensus 236 ~ 236 (253)
+
T Consensus 74 v 74 (413)
T 3l9w_A 74 N 74 (413)
T ss_dssp E
T ss_pred E
Confidence 6
No 405
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=81.69 E-value=6.1 Score=33.26 Aligned_cols=74 Identities=18% Similarity=0.282 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC------CCCccE
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL------ERQFQL 233 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~------~~~fD~ 233 (253)
.+++++|=-|.+.|. ++..|++.|+ +|+.+|.+.. +.+.+.++..|. ++.++++|+.+... .+..|+
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~--~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAP--DETLDIIAKDGG-NASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCC--HHHHHHHHHTTC-CEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcH--HHHHHHHHHhCC-cEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 467788888877775 4667777787 8999998753 233344444553 78899999877531 256888
Q ss_pred EEEcccc
Q 025428 234 VMDKGTL 240 (253)
Q Consensus 234 Vi~~~~l 240 (253)
++.+.-+
T Consensus 83 LVNNAGi 89 (247)
T 4hp8_A 83 LVNNAGI 89 (247)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 8876543
No 406
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=81.67 E-value=1.6 Score=38.74 Aligned_cols=44 Identities=20% Similarity=0.191 Sum_probs=36.3
Q ss_pred cCCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
...++.+||-+|+|. |.++..+++. |+ +|++++.+++.++.+++
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 346788999999974 7788888876 66 79999999998888876
No 407
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=81.59 E-value=6.9 Score=32.63 Aligned_cols=75 Identities=15% Similarity=0.205 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCCcHHHH----HHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEeccCCCcC-----C-----
Q 025428 164 SSWSVLDIGTGNGLLLQ----ELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS-CIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~----~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~-~i~~~~~D~~~~~~-----~----- 228 (253)
.++++|=.|++ |.++. .|++.|+ +|++++.++..++...+.+...+.. ++.++.+|+.+... .
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 56678877754 44444 4445577 8999999998887776666655542 58889999987531 1
Q ss_pred -CCccEEEEcccc
Q 025428 229 -RQFQLVMDKGTL 240 (253)
Q Consensus 229 -~~fD~Vi~~~~l 240 (253)
+.+|+|+.+..+
T Consensus 109 ~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 109 HSGVDICINNAGL 121 (279)
T ss_dssp HCCCSEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 368988876543
No 408
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=81.58 E-value=5.8 Score=33.02 Aligned_cols=75 Identities=11% Similarity=0.186 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeC-CHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDY-SEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------E 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~-s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~ 228 (253)
.+++||=.|++.|. ++..|+++|+ +|+.++. ++...+...+.++..+. ++.++.+|+.+... .
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGY-KAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 56788887776553 3455556677 8999998 66666666666665553 78999999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 106 g~id~li~nAg~ 117 (271)
T 4iin_A 106 GGLSYLVNNAGV 117 (271)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 478988876543
No 409
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=81.52 E-value=5.8 Score=32.31 Aligned_cols=73 Identities=12% Similarity=0.120 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCCcHHHHHHH----hcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------
Q 025428 164 SSWSVLDIGTGNGLLLQELS----KQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la----~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------ 228 (253)
.+++||=.| |+|.++..++ +.|+ +|++++.++..++...+.+...+ .++.++.+|+.+... .
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 456777666 4566655554 4476 89999999987776666555444 368899999987531 1
Q ss_pred CCccEEEEccc
Q 025428 229 RQFQLVMDKGT 239 (253)
Q Consensus 229 ~~fD~Vi~~~~ 239 (253)
+.+|+|+.+..
T Consensus 87 ~~~d~vi~~Ag 97 (255)
T 1fmc_A 87 GKVDILVNNAG 97 (255)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37898887654
No 410
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=81.52 E-value=6.3 Score=32.48 Aligned_cols=74 Identities=8% Similarity=0.090 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCCcHHHH----HHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------
Q 025428 164 SSWSVLDIGTGNGLLLQ----ELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~----~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------ 228 (253)
.++++|=.|++ |.++. .|++.|+ +|+.++.+++.++...+.+...+. ++.++.+|+.+... .
T Consensus 13 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 13 ENKVALVTAST-DGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45677777654 44444 4455577 899999999877766665554443 68889999877431 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+..+
T Consensus 90 g~iD~lv~~Ag~ 101 (260)
T 2zat_A 90 GGVDILVSNAAV 101 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368998876543
No 411
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.50 E-value=1.9 Score=39.67 Aligned_cols=62 Identities=15% Similarity=0.214 Sum_probs=45.0
Q ss_pred CEEEEEcCCCcHHHHHHHhc----CCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----C-CCccEEEE
Q 025428 166 WSVLDIGTGNGLLLQELSKQ----GFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----E-RQFQLVMD 236 (253)
Q Consensus 166 ~~VLDiGcGtG~~~~~la~~----g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----~-~~fD~Vi~ 236 (253)
.+|+=+||| .++..+++. |. .|+.+|.+++.++.+.+++ ++..++||..+... . +..|++++
T Consensus 4 M~iiI~G~G--~vG~~la~~L~~~~~-~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 4 MKIIILGAG--QVGGTLAENLVGENN-DITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEEEECCS--HHHHHHHHHTCSTTE-EEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 467766665 555555554 44 8999999999998777652 56899999988642 2 67888876
No 412
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=81.48 E-value=7 Score=32.15 Aligned_cols=72 Identities=24% Similarity=0.358 Sum_probs=48.5
Q ss_pred CEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------CCCc
Q 025428 166 WSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------ERQF 231 (253)
Q Consensus 166 ~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~~~f 231 (253)
+++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+ .++.++.+|+.+... -+..
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAG-GHAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 467777755442 3344555677 89999999987776666555444 268899999987531 1378
Q ss_pred cEEEEccc
Q 025428 232 QLVMDKGT 239 (253)
Q Consensus 232 D~Vi~~~~ 239 (253)
|+++.+.-
T Consensus 81 d~lv~nAg 88 (256)
T 1geg_A 81 DVIVNNAG 88 (256)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99887654
No 413
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=81.37 E-value=2.8 Score=33.89 Aligned_cols=61 Identities=11% Similarity=0.088 Sum_probs=41.6
Q ss_pred EEEEEcCCCcHHHHHHHh----cCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----C-CCccEEEE
Q 025428 167 SVLDIGTGNGLLLQELSK----QGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----E-RQFQLVMD 236 (253)
Q Consensus 167 ~VLDiGcGtG~~~~~la~----~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----~-~~fD~Vi~ 236 (253)
+|+=+|+ |.++..+++ .|. .|+.+|.+++.++...+. . ++.++.+|..+... . ..+|+|++
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~---~---~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKK---L---KATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHH---S---SSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHH---c---CCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 4566665 666655554 466 899999999988765432 1 46789999877431 1 56888876
No 414
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=80.82 E-value=7.8 Score=32.84 Aligned_cols=75 Identities=16% Similarity=0.096 Sum_probs=52.7
Q ss_pred CCCCEEEEEcCCCc-----HHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----------
Q 025428 163 LSSWSVLDIGTGNG-----LLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------- 227 (253)
Q Consensus 163 ~~~~~VLDiGcGtG-----~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------- 227 (253)
..++++|=.|++.| .++..|++.|+ +|+.++.++...+.+++..+..+ ++.++.+|+.+...
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHH
Confidence 46788999997633 25666777787 89999999876666555544443 57899999987531
Q ss_pred -CCCccEEEEcccc
Q 025428 228 -ERQFQLVMDKGTL 240 (253)
Q Consensus 228 -~~~fD~Vi~~~~l 240 (253)
-+..|+++.+.-+
T Consensus 106 ~~g~iD~lVnnAG~ 119 (293)
T 3grk_A 106 KWGKLDFLVHAIGF 119 (293)
T ss_dssp HTSCCSEEEECCCC
T ss_pred hcCCCCEEEECCcc
Confidence 1478998876543
No 415
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=80.75 E-value=4.1 Score=34.31 Aligned_cols=74 Identities=12% Similarity=0.126 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------CC
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------ER 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+...+ ++.++.+|+.+... -+
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 56788888865442 3444555677 89999999987776655554333 67888899877421 14
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 105 ~iD~lvnnAg~ 115 (276)
T 2b4q_A 105 RLDILVNNAGT 115 (276)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876643
No 416
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=80.69 E-value=6.5 Score=33.76 Aligned_cols=76 Identities=17% Similarity=0.239 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCC------------HHHHHHHHHHHHhcCCCceEEEEeccCCCcC
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYS------------EDAINLAQSLANRDGFSCIKFLVDDVLDTKL 227 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s------------~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~ 227 (253)
..++++|=.|++.|. ++..|++.|+ +|+.+|.+ ++.++...+.+...+. ++.++.+|+.+...
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRDLAS 121 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHH
Confidence 356788888876553 3555666677 89999986 6666666665555553 78999999987531
Q ss_pred ---------C--CCccEEEEcccc
Q 025428 228 ---------E--RQFQLVMDKGTL 240 (253)
Q Consensus 228 ---------~--~~fD~Vi~~~~l 240 (253)
. +..|+++.+.-+
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 1 478998877643
No 417
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=80.28 E-value=7.1 Score=27.43 Aligned_cols=65 Identities=18% Similarity=0.212 Sum_probs=43.2
Q ss_pred CCEEEEEcCCCcHHHHHHH----hcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----CCCccEEEE
Q 025428 165 SWSVLDIGTGNGLLLQELS----KQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----ERQFQLVMD 236 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la----~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----~~~fD~Vi~ 236 (253)
..+|+=+|+ |.++..++ ..|..+|+++|.+++.++... . .++.++..|+.+... -..+|+|+.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~---~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R---MGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T---TTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h---CCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 458999998 55554444 446348999999998776554 1 256778888876421 146898886
Q ss_pred cc
Q 025428 237 KG 238 (253)
Q Consensus 237 ~~ 238 (253)
..
T Consensus 76 ~~ 77 (118)
T 3ic5_A 76 AA 77 (118)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 418
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=80.23 E-value=8.2 Score=32.15 Aligned_cols=76 Identities=18% Similarity=0.203 Sum_probs=50.3
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHH-HhcCCCceEEEEeccCCCcC-----C-----
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLA-NRDGFSCIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~-~~~g~~~i~~~~~D~~~~~~-----~----- 228 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+ ...+. ++.++.+|+.+... .
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 356788888765442 3444555677 8999999988776665554 33342 68889999987521 0
Q ss_pred -CCccEEEEcccc
Q 025428 229 -RQFQLVMDKGTL 240 (253)
Q Consensus 229 -~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 97 ~g~iD~lvnnAg~ 109 (267)
T 1vl8_A 97 FGKLDTVVNAAGI 109 (267)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 368998876543
No 419
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=79.84 E-value=7.6 Score=31.75 Aligned_cols=74 Identities=18% Similarity=0.144 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCCcHHHH----HHHhcCCCcEEEEeC-CHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C-----
Q 025428 164 SSWSVLDIGTGNGLLLQ----ELSKQGFSDLTGVDY-SEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~----~la~~g~~~v~gvD~-s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~----- 228 (253)
.++++|=.|++ |.++. .|++.|+ +|+.++. +++.++...+.+...+ .++.++.+|+.+... .
T Consensus 3 ~~k~vlVTGas-~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 3 KGKVALVTGAS-RGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLG-SDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35677766654 55444 4445577 8999999 8877776666555444 368889999987531 1
Q ss_pred -CCccEEEEcccc
Q 025428 229 -RQFQLVMDKGTL 240 (253)
Q Consensus 229 -~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 80 ~g~id~lv~nAg~ 92 (246)
T 2uvd_A 80 FGQVDILVNNAGV 92 (246)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 368998876543
No 420
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=79.49 E-value=7.6 Score=31.74 Aligned_cols=73 Identities=14% Similarity=0.094 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCCcHHHHHH----Hh-cCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C-----
Q 025428 164 SSWSVLDIGTGNGLLLQEL----SK-QGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~l----a~-~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~----- 228 (253)
++++||=.| |+|.++..+ ++ .|+ +|++++.++..++...+.+...+ .++.++.+|+.+... .
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 456777666 556655444 45 566 89999999887777766665544 368899999987531 1
Q ss_pred -CCccEEEEccc
Q 025428 229 -RQFQLVMDKGT 239 (253)
Q Consensus 229 -~~fD~Vi~~~~ 239 (253)
+.+|+|+.+..
T Consensus 80 ~g~id~li~~Ag 91 (276)
T 1wma_A 80 YGGLDVLVNNAG 91 (276)
T ss_dssp HSSEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 37898887654
No 421
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=79.17 E-value=7.6 Score=32.44 Aligned_cols=75 Identities=16% Similarity=0.155 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeC-CHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDY-SEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E-- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~-s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~-- 228 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++. ++..++...+.+...+. ++.++.+|+.+... .
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGG-EAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56778877765543 3455566677 8988888 77777777666665553 78899999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 105 g~id~lv~nAg~ 116 (269)
T 4dmm_A 105 GRLDVLVNNAGI 116 (269)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478988876543
No 422
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=79.10 E-value=9.1 Score=32.62 Aligned_cols=73 Identities=12% Similarity=0.112 Sum_probs=53.8
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----------C-
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----------E- 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----------~- 228 (253)
.+++.+|=-|++.|. ++..|++.|+ +|+.+|.+++.++.+.+.+ + .++.++++|+.+... .
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~---g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI---G-GGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---C-TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc---C-CCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 477888988987775 4666777788 9999999999887665543 3 267788999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
++.|+++.+.-.
T Consensus 102 G~iDiLVNNAG~ 113 (273)
T 4fgs_A 102 GRIDVLFVNAGG 113 (273)
T ss_dssp SCEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578988876643
No 423
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=79.09 E-value=7.6 Score=32.68 Aligned_cols=77 Identities=10% Similarity=0.158 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeC-CHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDY-SEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----------- 227 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~-s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----------- 227 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++. +++.++...+.+....-.++.++.+|+.+...
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR 101 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 356788888876553 3455666677 8999998 66777666665544322478899999987531
Q ss_pred CCCccEEEEcccc
Q 025428 228 ERQFQLVMDKGTL 240 (253)
Q Consensus 228 ~~~fD~Vi~~~~l 240 (253)
-+..|+++.+.-+
T Consensus 102 ~g~iD~lv~nAg~ 114 (281)
T 3v2h_A 102 FGGADILVNNAGV 114 (281)
T ss_dssp TSSCSEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 1478998876644
No 424
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=78.90 E-value=10 Score=31.90 Aligned_cols=73 Identities=7% Similarity=0.069 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCCcHHHHH----HHhcCCCcEEEEeCCHHHHHHHHHHHHh-----cCCCceEEEEeccCCCcC-----C-
Q 025428 164 SSWSVLDIGTGNGLLLQE----LSKQGFSDLTGVDYSEDAINLAQSLANR-----DGFSCIKFLVDDVLDTKL-----E- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~----la~~g~~~v~gvD~s~~~l~~ar~~~~~-----~g~~~i~~~~~D~~~~~~-----~- 228 (253)
.+++||=.|++ |.++.. |++.|+ +|++++.++..++...+.+.. .+ .++.++.+|+.+... .
T Consensus 17 ~~k~vlVTGas-ggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 17 QGQVAIVTGGA-TGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQ-ARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCC-CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCC-ccEEEEecCCCCHHHHHHHHHH
Confidence 56788888854 555544 445576 899999999887766665544 22 368999999987531 1
Q ss_pred -----CCccEEEEccc
Q 025428 229 -----RQFQLVMDKGT 239 (253)
Q Consensus 229 -----~~fD~Vi~~~~ 239 (253)
+.+|+|+.+..
T Consensus 94 ~~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 36899887664
No 425
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=78.89 E-value=7.7 Score=32.96 Aligned_cols=75 Identities=19% Similarity=0.225 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCCcHHH----HHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEEeccCCCcC-----C----
Q 025428 164 SSWSVLDIGTGNGLLL----QELSKQGFSDLTGVDYSEDAINLAQSLANRDGFS--CIKFLVDDVLDTKL-----E---- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~----~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~--~i~~~~~D~~~~~~-----~---- 228 (253)
.++++|=.|++ |.++ ..|++.|+ +|+.++.+++.++...+.+...+.. ++.++.+|+.+... .
T Consensus 25 ~~k~vlVTGas-~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 25 SGKSVIITGSS-NGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 45677777754 4444 44455677 8999999998887766665544421 68899999987531 1
Q ss_pred --CCccEEEEcccc
Q 025428 229 --RQFQLVMDKGTL 240 (253)
Q Consensus 229 --~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 103 ~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 103 KFGKIDILVNNAGA 116 (297)
T ss_dssp HHSCCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 368998876643
No 426
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=78.80 E-value=7 Score=32.36 Aligned_cols=74 Identities=8% Similarity=0.145 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEE-eCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGV-DYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gv-D~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------ 228 (253)
.++++|=.|++.|. ++..|++.|+ +|+.+ +.+++.++...+.+...+ .++.++.+|+.+... .
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLG-RSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTT-SCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 56788888877664 4556666787 78877 777777777666665554 368899999987531 1
Q ss_pred CCccEEEEccc
Q 025428 229 RQFQLVMDKGT 239 (253)
Q Consensus 229 ~~fD~Vi~~~~ 239 (253)
+..|+++.+.-
T Consensus 85 g~id~lv~nAg 95 (259)
T 3edm_A 85 GEIHGLVHVAG 95 (259)
T ss_dssp CSEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47888887653
No 427
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=78.72 E-value=7.3 Score=32.29 Aligned_cols=74 Identities=14% Similarity=0.191 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEE-eCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGV-DYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E-- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gv-D~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~-- 228 (253)
+++++|=.|++.|. ++..|++.|+ +|+.+ +.+++.++...+.+...+. ++.++.+|+.+... .
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35677777765443 3445555677 77775 8898888777776665553 78999999987531 1
Q ss_pred CCccEEEEccc
Q 025428 229 RQFQLVMDKGT 239 (253)
Q Consensus 229 ~~fD~Vi~~~~ 239 (253)
+..|+++.+.-
T Consensus 81 g~id~lv~nAg 91 (258)
T 3oid_A 81 GRLDVFVNNAA 91 (258)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46799887664
No 428
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=78.68 E-value=8.2 Score=31.73 Aligned_cols=73 Identities=15% Similarity=0.112 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCCcHHHHHH----HhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc-----C-------
Q 025428 164 SSWSVLDIGTGNGLLLQEL----SKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK-----L------- 227 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~l----a~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~-----~------- 227 (253)
.+++||=.|+ +|.++..+ ++.|+ +|++++.++..++...+.+...+. ++.++.+|+.+.. +
T Consensus 13 ~~k~vlITGa-sggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 13 KAKTVLVTGG-TKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMF 89 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4567776665 55555444 45576 899999998877766665554443 6889999987742 1
Q ss_pred CCCccEEEEccc
Q 025428 228 ERQFQLVMDKGT 239 (253)
Q Consensus 228 ~~~fD~Vi~~~~ 239 (253)
.+..|+++.+..
T Consensus 90 ~~~id~li~~Ag 101 (266)
T 1xq1_A 90 GGKLDILINNLG 101 (266)
T ss_dssp TTCCSEEEEECC
T ss_pred CCCCcEEEECCC
Confidence 146798887654
No 429
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=78.53 E-value=2 Score=38.96 Aligned_cols=44 Identities=18% Similarity=0.093 Sum_probs=37.3
Q ss_pred CCEEEEEcCCCcHHHHHHHhcC--CCc----EEEEeCCHHHHHHHHHHHH
Q 025428 165 SWSVLDIGTGNGLLLQELSKQG--FSD----LTGVDYSEDAINLAQSLAN 208 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la~~g--~~~----v~gvD~s~~~l~~ar~~~~ 208 (253)
..+|||+.||.|.+...|.+.| +.- |.++|+++.+++.-+.+..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 3599999999999999998876 334 7889999999998888764
No 430
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=78.36 E-value=7.7 Score=32.58 Aligned_cols=74 Identities=16% Similarity=0.138 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCCcHHHH----HHHhcCCCcEEEEeCCHHHHHHHHHHHHhc-CCCceEEEEeccCCCcC-----------
Q 025428 164 SSWSVLDIGTGNGLLLQ----ELSKQGFSDLTGVDYSEDAINLAQSLANRD-GFSCIKFLVDDVLDTKL----------- 227 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~----~la~~g~~~v~gvD~s~~~l~~ar~~~~~~-g~~~i~~~~~D~~~~~~----------- 227 (253)
.++++|=.|++ |.++. .|++.|+ +|++++.++..++...+.+... + .++.++.+|+.+...
T Consensus 25 ~~k~vlITGas-ggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 25 QGKVAFITGGG-TGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 56788887765 44444 4455577 8999999998777665555433 3 368999999987531
Q ss_pred CCCccEEEEcccc
Q 025428 228 ERQFQLVMDKGTL 240 (253)
Q Consensus 228 ~~~fD~Vi~~~~l 240 (253)
-+.+|+++.+..+
T Consensus 102 ~g~id~li~~Ag~ 114 (302)
T 1w6u_A 102 AGHPNIVINNAAG 114 (302)
T ss_dssp TCSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1467999876653
No 431
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=77.93 E-value=8.8 Score=31.53 Aligned_cols=73 Identities=12% Similarity=0.063 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCCcHHHHHH----HhcCCCcEEEEeC-CHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C-----
Q 025428 164 SSWSVLDIGTGNGLLLQEL----SKQGFSDLTGVDY-SEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~l----a~~g~~~v~gvD~-s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~----- 228 (253)
++++||=.|+ +|.++..+ +++|+ +|++++. ++..++...+.+...+. ++.++.+|+.+... .
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4567886665 55555544 44576 8999998 87777666655554443 68899999987531 1
Q ss_pred -CCccEEEEccc
Q 025428 229 -RQFQLVMDKGT 239 (253)
Q Consensus 229 -~~fD~Vi~~~~ 239 (253)
+..|+|+.+..
T Consensus 97 ~~~~d~vi~~Ag 108 (274)
T 1ja9_A 97 FGGLDFVMSNSG 108 (274)
T ss_dssp HSCEEEEECCCC
T ss_pred cCCCCEEEECCC
Confidence 36788886543
No 432
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=77.82 E-value=8.3 Score=32.60 Aligned_cols=74 Identities=16% Similarity=0.289 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHH-HHHHHHHHHHhcCCCceEEEEeccCCCcC----------C-
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSED-AINLAQSLANRDGFSCIKFLVDDVLDTKL----------E- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~-~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----------~- 228 (253)
+++++|=.|++.|. ++..|++.|+ +|+.++.++. ..+...+.....+ .++.++.+|+.+... .
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEG-VKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTT-CCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56788888876553 3455666677 8999999865 3444444444444 378999999987531 1
Q ss_pred CCccEEEEccc
Q 025428 229 RQFQLVMDKGT 239 (253)
Q Consensus 229 ~~fD~Vi~~~~ 239 (253)
+..|+++.+.-
T Consensus 124 g~iD~lvnnAg 134 (291)
T 3ijr_A 124 GSLNILVNNVA 134 (291)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46899887643
No 433
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=77.71 E-value=11 Score=31.02 Aligned_cols=73 Identities=15% Similarity=0.183 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhc--CCCceEEEEeccCCCc-----CC-----
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRD--GFSCIKFLVDDVLDTK-----LE----- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~--g~~~i~~~~~D~~~~~-----~~----- 228 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+... + .++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSG-AQVDIVAGDIREPGDIDRLFEKARDL 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTT-CCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCC-CeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 45678888765442 3344555677 8999999998777665555432 2 26888999997753 11
Q ss_pred -CCccEEEEccc
Q 025428 229 -RQFQLVMDKGT 239 (253)
Q Consensus 229 -~~fD~Vi~~~~ 239 (253)
+ .|+++.+.-
T Consensus 84 ~g-id~lv~~Ag 94 (260)
T 2z1n_A 84 GG-ADILVYSTG 94 (260)
T ss_dssp TC-CSEEEECCC
T ss_pred cC-CCEEEECCC
Confidence 3 788887654
No 434
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=77.68 E-value=3.1 Score=36.84 Aligned_cols=44 Identities=20% Similarity=0.305 Sum_probs=35.5
Q ss_pred CCCCCEEEEEcCC-CcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 162 YLSSWSVLDIGTG-NGLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 162 ~~~~~~VLDiGcG-tG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
..++.+||-+|+| .|.++..+++. |+.+|++++.+++.++.+++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 4577899999976 57777888876 64599999999998888774
No 435
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=77.56 E-value=9.1 Score=32.31 Aligned_cols=61 Identities=16% Similarity=0.144 Sum_probs=42.3
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEe-CCHHHHHHHHHHHH-hcCCCceEEEEeccCCCc
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVD-YSEDAINLAQSLAN-RDGFSCIKFLVDDVLDTK 226 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD-~s~~~l~~ar~~~~-~~g~~~i~~~~~D~~~~~ 226 (253)
.++++|=.|++.|. ++..|+++|+ +|+.++ .+++.++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCcc
Confidence 45677777765442 3344555677 899999 99988777666654 334 36889999998764
No 436
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=77.47 E-value=3.9 Score=35.54 Aligned_cols=44 Identities=20% Similarity=0.204 Sum_probs=36.4
Q ss_pred cCCCCCEEEEEcC--CCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGT--GNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGc--GtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
+..++.+||-+|+ |.|..+..+++. |+ +|++++.+++.++.+++
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh
Confidence 3467889999998 678888888876 66 99999999998888865
No 437
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=77.38 E-value=3.1 Score=36.23 Aligned_cols=43 Identities=33% Similarity=0.278 Sum_probs=34.6
Q ss_pred CCCEEEEEcCC-CcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 164 SSWSVLDIGTG-NGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 164 ~~~~VLDiGcG-tG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
++.+||-+|+| .|.++..+++. |+.+|+++|.+++.++.+++.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~ 211 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV 211 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 67899999986 37777777775 665899999999988888753
No 438
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=77.26 E-value=11 Score=31.20 Aligned_cols=73 Identities=16% Similarity=0.216 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E-- 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~-- 228 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+ + .++.++.+|+.+... .
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF---G-PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 356788888876554 3455666677 8999999998877666554 2 368899999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 81 g~id~lv~nAg~ 92 (255)
T 4eso_A 81 GAIDLLHINAGV 92 (255)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478988876543
No 439
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=77.22 E-value=8.5 Score=32.07 Aligned_cols=69 Identities=14% Similarity=0.221 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC--------C--CC
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL--------E--RQ 230 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~--------~--~~ 230 (253)
.++++|=.|++.|. ++..|+++|+ +|+.+|.+++.++...+.+ + .++.++.+|+.+... . +.
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 103 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADEL---G-NRAEFVSTNVTSEDSVLAAIEAANQLGR 103 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh---C-CceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 56788888876553 3455566677 8999999998877666554 2 368999999987531 1 46
Q ss_pred ccEEEEc
Q 025428 231 FQLVMDK 237 (253)
Q Consensus 231 fD~Vi~~ 237 (253)
.|+++.+
T Consensus 104 id~lv~~ 110 (281)
T 3ppi_A 104 LRYAVVA 110 (281)
T ss_dssp EEEEEEC
T ss_pred CCeEEEc
Confidence 7888876
No 440
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=77.21 E-value=8.4 Score=31.99 Aligned_cols=74 Identities=14% Similarity=0.109 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCCcHHHHH----HHhcCCCcEEEEeC-CHHHHHHHHHHHHhc-CCCceEEEEeccCCC----cC-----C
Q 025428 164 SSWSVLDIGTGNGLLLQE----LSKQGFSDLTGVDY-SEDAINLAQSLANRD-GFSCIKFLVDDVLDT----KL-----E 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~----la~~g~~~v~gvD~-s~~~l~~ar~~~~~~-g~~~i~~~~~D~~~~----~~-----~ 228 (253)
.++++|=.|++ |.++.. |++.|+ +|+.++. +++.++...+.+... + .++.++.+|+.+. .. .
T Consensus 10 ~~k~~lVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 10 ECPAAVITGGA-RRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLSSSLLDCCEDIID 86 (276)
T ss_dssp -CCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCCccccHHHHHHHHH
Confidence 45677766654 555544 445577 8999999 888777666655443 3 3688999999876 31 0
Q ss_pred ------CCccEEEEcccc
Q 025428 229 ------RQFQLVMDKGTL 240 (253)
Q Consensus 229 ------~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 87 ~~~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 368998877643
No 441
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=77.13 E-value=8.2 Score=32.06 Aligned_cols=76 Identities=12% Similarity=0.128 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEeccCCCcC-------CCCcc
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGF-SCIKFLVDDVLDTKL-------ERQFQ 232 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~-~~i~~~~~D~~~~~~-------~~~fD 232 (253)
.++++|=.|++.|. ++..|++.|+ +|+.+|.+++.++...+.+...+. ..+.++.+|+.+... -+..|
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 56788877765543 3455556677 899999999888777666655432 257888999876431 14689
Q ss_pred EEEEcccc
Q 025428 233 LVMDKGTL 240 (253)
Q Consensus 233 ~Vi~~~~l 240 (253)
+++.+.-+
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 88876543
No 442
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=77.09 E-value=8.6 Score=31.44 Aligned_cols=73 Identities=12% Similarity=0.060 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCCcHHHHH----HHhcCCCcEEEEeC-CHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C-----
Q 025428 164 SSWSVLDIGTGNGLLLQE----LSKQGFSDLTGVDY-SEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~----la~~g~~~v~gvD~-s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~----- 228 (253)
.+++||=.|+ +|.++.. |++.|+ +|++++. ++..++...+.+...+ .++.++.+|+.+... .
T Consensus 6 ~~k~vlITGa-sggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 6 EGKVVVITGS-STGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4567777665 4555544 445577 8999999 8776666555554444 268899999987531 1
Q ss_pred -CCccEEEEccc
Q 025428 229 -RQFQLVMDKGT 239 (253)
Q Consensus 229 -~~fD~Vi~~~~ 239 (253)
+.+|+++.+..
T Consensus 83 ~g~id~li~~Ag 94 (261)
T 1gee_A 83 FGKLDVMINNAG 94 (261)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 36898887654
No 443
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=77.07 E-value=3.1 Score=35.89 Aligned_cols=44 Identities=18% Similarity=0.244 Sum_probs=34.4
Q ss_pred cCCCCCEEEEEcC--CCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGT--GNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGc--GtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
+..++.+||-.|+ |.|..+..+++. |+ +|+++|.+++.++.+++
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~ 188 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQ 188 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh
Confidence 3467889999997 567777666665 76 99999999988887743
No 444
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=77.05 E-value=8.5 Score=34.24 Aligned_cols=78 Identities=22% Similarity=0.283 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCCcHHHHHHHh----cCCCcEEEEeCCHHHHHHHHHHHHhc-CC--CceEEEEeccCCCcC------CCC
Q 025428 164 SSWSVLDIGTGNGLLLQELSK----QGFSDLTGVDYSEDAINLAQSLANRD-GF--SCIKFLVDDVLDTKL------ERQ 230 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~----~g~~~v~gvD~s~~~l~~ar~~~~~~-g~--~~i~~~~~D~~~~~~------~~~ 230 (253)
.+++||=.| |+|.++..+++ .|..+|++++.++..+....+.+... +. .++.++.+|+.+... ...
T Consensus 34 ~~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 34 SQSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp HTCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 456788777 45666666555 46459999999998877665554432 11 368999999987531 257
Q ss_pred ccEEEEccccce
Q 025428 231 FQLVMDKGTLDA 242 (253)
Q Consensus 231 fD~Vi~~~~l~~ 242 (253)
+|+|+.....-+
T Consensus 113 ~D~Vih~Aa~~~ 124 (399)
T 3nzo_A 113 YDYVLNLSALKH 124 (399)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEECCCcCC
Confidence 899987655433
No 445
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=77.03 E-value=2.2 Score=37.44 Aligned_cols=45 Identities=20% Similarity=0.074 Sum_probs=36.1
Q ss_pred cCCCCCEEEEEcCC-CcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTG-NGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 161 ~~~~~~~VLDiGcG-tG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
+..++.+||-+|+| .|.++..+++. |+ +|++++.+++.++.+++.
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l 222 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM 222 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc
Confidence 34678899999986 47777777776 77 799999999888888763
No 446
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=76.96 E-value=9.1 Score=32.17 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=51.9
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E-- 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~-- 228 (253)
..++++|=.|++.|. ++..|++.|+ +|+.+|.+++.++...+.+ + .++.++.+|+.+... .
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKI---G-CGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH---C-SSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---C-CcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 356788888876653 4556666777 9999999998777665544 3 368899999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 102 g~iD~lvnnAg~ 113 (277)
T 3gvc_A 102 GGVDKLVANAGV 113 (277)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478998877644
No 447
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=76.86 E-value=1.8 Score=41.70 Aligned_cols=75 Identities=17% Similarity=0.189 Sum_probs=47.6
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-----------CC--CcEEEEeC---CHHHHHHHHH-----------HHHhc-----C
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-----------GF--SDLTGVDY---SEDAINLAQS-----------LANRD-----G 211 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-----------g~--~~v~gvD~---s~~~l~~ar~-----------~~~~~-----g 211 (253)
+.-+|+|+|.|+|.....+.+. .. -+++++|. +.+-+..+-+ .++.. |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 4469999999999987766543 01 27999999 5555554321 12111 1
Q ss_pred -----C----CceEEEEeccCCCcC------CCCccEEEEcc
Q 025428 212 -----F----SCIKFLVDDVLDTKL------ERQFQLVMDKG 238 (253)
Q Consensus 212 -----~----~~i~~~~~D~~~~~~------~~~fD~Vi~~~ 238 (253)
+ -.+++..||+.+... ...+|+++..+
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~ 179 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDG 179 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECS
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECC
Confidence 1 147788899866421 35799998865
No 448
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=76.67 E-value=9.7 Score=31.89 Aligned_cols=74 Identities=11% Similarity=0.139 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCCcHHHHHHHh----cCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------C
Q 025428 164 SSWSVLDIGTGNGLLLQELSK----QGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------E 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~----~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~ 228 (253)
.+++||=.|++ |.++..+++ .|+ +|++++.++..++...+.+...+. ++.++.+|+.+... -
T Consensus 43 ~~k~vlITGas-ggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 43 ENKVALVTGAG-RGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp SSCEEEEESTT-SHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 45678877755 555555444 466 899999998877766665554443 68899999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+|+.+..+
T Consensus 120 ~~id~li~~Ag~ 131 (285)
T 2c07_A 120 KNVDILVNNAGI 131 (285)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468998876543
No 449
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=76.47 E-value=4.5 Score=34.72 Aligned_cols=74 Identities=18% Similarity=0.238 Sum_probs=45.0
Q ss_pred CCCEEEEEcCCCcHHHHHHHh----cCCCcEEEEeCCHH----HHHHHHHHHHhcCCCceEEEEeccCCCcC----CCCc
Q 025428 164 SSWSVLDIGTGNGLLLQELSK----QGFSDLTGVDYSED----AINLAQSLANRDGFSCIKFLVDDVLDTKL----ERQF 231 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~----~g~~~v~gvD~s~~----~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----~~~f 231 (253)
.+.+||=.| |+|.++..+++ .|. +|++++.++. .+...+.........+++++.+|+.+... -..+
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 457888776 56776665554 466 8999998543 33322221110001378999999987531 1468
Q ss_pred cEEEEccc
Q 025428 232 QLVMDKGT 239 (253)
Q Consensus 232 D~Vi~~~~ 239 (253)
|+|+....
T Consensus 102 d~Vih~A~ 109 (351)
T 3ruf_A 102 DHVLHQAA 109 (351)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99886554
No 450
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=76.35 E-value=8.2 Score=31.79 Aligned_cols=74 Identities=19% Similarity=0.319 Sum_probs=48.0
Q ss_pred CCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHH--HHHHHHHHHhcCCCceEEEEeccCCCcC-----C------
Q 025428 165 SWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDA--INLAQSLANRDGFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 165 ~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~--l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------ 228 (253)
++++|=.|++.|. ++..|++.|+ +|+.++.+++. ++...+.+...+ .++.++.+|+.+... .
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAAD-QKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3567777765442 3344555677 89999998876 555555544434 368899999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 80 g~iD~lv~nAg~ 91 (258)
T 3a28_C 80 GGFDVLVNNAGI 91 (258)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368998876643
No 451
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=76.19 E-value=8.6 Score=32.60 Aligned_cols=75 Identities=21% Similarity=0.213 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCCC--cH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C
Q 025428 163 LSSWSVLDIGTGN--GL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E 228 (253)
Q Consensus 163 ~~~~~VLDiGcGt--G~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~ 228 (253)
..++++|=.|++. |. ++..|++.|+ +|+.++.++...+...+..+..+ ++.++.+|+.+... .
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 3567899999753 33 5666777787 89999999866665555544443 46889999987531 1
Q ss_pred --CCccEEEEcccc
Q 025428 229 --RQFQLVMDKGTL 240 (253)
Q Consensus 229 --~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 105 ~~g~iD~lVnnAG~ 118 (296)
T 3k31_A 105 EWGSLDFVVHAVAF 118 (296)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 478998876643
No 452
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=76.17 E-value=4.9 Score=34.49 Aligned_cols=75 Identities=16% Similarity=0.103 Sum_probs=44.2
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCC-CCccEEEEcc
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLE-RQFQLVMDKG 238 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~-~~fD~Vi~~~ 238 (253)
..++++|=+|+| |. ....|+..|.++|+.++.+++..+...+.+...+. .+.+...+..++... ..+|+|+..-
T Consensus 125 l~~k~vlVlGaG-G~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~-~~~i~~~~~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 125 AKLDSVVQVGAG-GVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG-REAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp CCCSEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHT-SCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred cCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcC-CceEEEcCHHHHHHHHhcCCEEEECC
Confidence 467899999986 32 34455666887899999998876655444433221 223333333232111 3578888644
Q ss_pred c
Q 025428 239 T 239 (253)
Q Consensus 239 ~ 239 (253)
.
T Consensus 203 p 203 (283)
T 3jyo_A 203 P 203 (283)
T ss_dssp S
T ss_pred C
Confidence 3
No 453
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=76.08 E-value=4.8 Score=35.36 Aligned_cols=44 Identities=23% Similarity=0.249 Sum_probs=36.5
Q ss_pred cCCCCCEEEEEc--CCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIG--TGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiG--cGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
+..++.+||-+| +|.|..+..+++. |+ +|++++.+++.++.+++
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence 446788999999 5688888888876 66 89999999988888765
No 454
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=75.92 E-value=4.8 Score=34.90 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=35.6
Q ss_pred cCCCCCEEEEEcCC-CcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTG-NGLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGcG-tG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
...++.+||-+|+| .|.++..+++. |+ +|++++.+++.++.+++
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE 206 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 34678899999986 57777777776 66 99999999998888764
No 455
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=75.88 E-value=2.1 Score=35.93 Aligned_cols=73 Identities=26% Similarity=0.277 Sum_probs=44.9
Q ss_pred CCCEEEEEcCC-CcH-HHHHHHhcCCCcEEEEeCCH-------------------HHHHHHHHHHHhcCC-CceEEEEec
Q 025428 164 SSWSVLDIGTG-NGL-LLQELSKQGFSDLTGVDYSE-------------------DAINLAQSLANRDGF-SCIKFLVDD 221 (253)
Q Consensus 164 ~~~~VLDiGcG-tG~-~~~~la~~g~~~v~gvD~s~-------------------~~l~~ar~~~~~~g~-~~i~~~~~D 221 (253)
.+.+||=+||| .|. .+..|+..|..+++.+|.+. .-.+.+.+++...+. .++..+..+
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~ 109 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL 109 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence 34689999997 333 35556666888999999986 455666666654332 134554444
Q ss_pred cCCCcC---CCCccEEEE
Q 025428 222 VLDTKL---ERQFQLVMD 236 (253)
Q Consensus 222 ~~~~~~---~~~fD~Vi~ 236 (253)
+..... -..+|+|+.
T Consensus 110 ~~~~~~~~~~~~~DvVi~ 127 (249)
T 1jw9_B 110 LDDAELAALIAEHDLVLD 127 (249)
T ss_dssp CCHHHHHHHHHTSSEEEE
T ss_pred CCHhHHHHHHhCCCEEEE
Confidence 432111 146898886
No 456
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=75.86 E-value=8 Score=31.66 Aligned_cols=74 Identities=19% Similarity=0.179 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCCcHHHH----HHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCC------CceEEEEeccCCCcC-----C
Q 025428 164 SSWSVLDIGTGNGLLLQ----ELSKQGFSDLTGVDYSEDAINLAQSLANRDGF------SCIKFLVDDVLDTKL-----E 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~----~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~------~~i~~~~~D~~~~~~-----~ 228 (253)
.+++||=.|++. .++. .|++.|+ +|++++.++..++...+.+...+. .++.++.+|+.+... .
T Consensus 6 ~~k~vlITGasg-giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 6 RSALALVTGAGS-GIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 456788777654 4444 4455576 899999998877665544433221 367899999987531 0
Q ss_pred ------CCc-cEEEEccc
Q 025428 229 ------RQF-QLVMDKGT 239 (253)
Q Consensus 229 ------~~f-D~Vi~~~~ 239 (253)
+.. |+|+.+..
T Consensus 84 ~~~~~~g~i~d~vi~~Ag 101 (264)
T 2pd6_A 84 QVQACFSRPPSVVVSCAG 101 (264)
T ss_dssp HHHHHHSSCCSEEEECCC
T ss_pred HHHHHhCCCCeEEEECCC
Confidence 234 88887654
No 457
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=75.85 E-value=0.51 Score=52.39 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCCcHHHHHHHhc-C-----CCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCC-c-CCCCccEEE
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQ-G-----FSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDT-K-LERQFQLVM 235 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~-g-----~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~-~-~~~~fD~Vi 235 (253)
+..+||+||.|||..+..+.+. + +.+++..|+|+...+.++++++.. +++.-.-|..+. + .+.+||+|+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---di~~~~~d~~~~~~~~~~~ydlvi 1316 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---HVTQGQWDPANPAPGSLGKADLLV 1316 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---TEEEECCCSSCCCC-----CCEEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---ccccccccccccccCCCCceeEEE
Confidence 4569999999999875554432 1 337889999998888888776542 233322233332 1 236799999
Q ss_pred Eccccce
Q 025428 236 DKGTLDA 242 (253)
Q Consensus 236 ~~~~l~~ 242 (253)
...+||.
T Consensus 1317 a~~vl~~ 1323 (2512)
T 2vz8_A 1317 CNCALAT 1323 (2512)
T ss_dssp EECC---
T ss_pred Ecccccc
Confidence 9999884
No 458
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=75.85 E-value=2.3 Score=37.03 Aligned_cols=45 Identities=22% Similarity=0.211 Sum_probs=36.9
Q ss_pred cCCCCCEEEEEcCC--CcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGTG--NGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 161 ~~~~~~~VLDiGcG--tG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
...++.+||-+|+| .|..+..+++. |+ +|+++|.+++.++.+++.
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l 188 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRL 188 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhC
Confidence 34678899999987 67788888776 77 999999999888888763
No 459
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=75.46 E-value=12 Score=30.48 Aligned_cols=71 Identities=17% Similarity=0.200 Sum_probs=49.4
Q ss_pred CCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------CCC
Q 025428 165 SWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------ERQ 230 (253)
Q Consensus 165 ~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~~~ 230 (253)
++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+. .++.++.+|+.+... .+.
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 77 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLG----NAVIGIVADLAHHEDVDVAFAAAVEWGGL 77 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG----GGEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhc----CCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4578878866553 3455666677 89999999988877666552 158899999987531 146
Q ss_pred ccEEEEcccc
Q 025428 231 FQLVMDKGTL 240 (253)
Q Consensus 231 fD~Vi~~~~l 240 (253)
.|+++.+.-+
T Consensus 78 id~lvnnAg~ 87 (235)
T 3l6e_A 78 PELVLHCAGT 87 (235)
T ss_dssp CSEEEEECCC
T ss_pred CcEEEECCCC
Confidence 7988876544
No 460
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=75.39 E-value=13 Score=30.51 Aligned_cols=72 Identities=15% Similarity=0.218 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------CC
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----------ER 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----------~~ 229 (253)
.++++|=.|++.|. ++..|+++|+ +|+.+|.+++.++...+.+ + .++.++.+|+.+... -+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEI---G-PAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---C-CCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 56788888866543 3455666677 8999999998776665543 2 267899999987531 13
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 82 ~id~lv~~Ag~ 92 (259)
T 4e6p_A 82 GLDILVNNAAL 92 (259)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 78998877644
No 461
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=75.31 E-value=5.2 Score=34.55 Aligned_cols=45 Identities=31% Similarity=0.451 Sum_probs=35.1
Q ss_pred CCCCCEEEEEcCCC-cHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 162 YLSSWSVLDIGTGN-GLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 162 ~~~~~~VLDiGcGt-G~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
..++.+||=.|+|. |.++..+++. |+..++++|.+++-++.+++.
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l 204 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF 204 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc
Confidence 36788999999874 5566666666 776789999999988888763
No 462
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=75.11 E-value=11 Score=30.33 Aligned_cols=73 Identities=10% Similarity=0.056 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCCcHHHHHH----HhcCCCcEEEEeCCHHHHHHHHHHHHh-cCCCceEEEEeccCCCcC-----C-----
Q 025428 164 SSWSVLDIGTGNGLLLQEL----SKQGFSDLTGVDYSEDAINLAQSLANR-DGFSCIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~l----a~~g~~~v~gvD~s~~~l~~ar~~~~~-~g~~~i~~~~~D~~~~~~-----~----- 228 (253)
.++++|=.|+ +|.++..+ +++|+ +|++++.+++.++...+.+.. .+ .++.++.+|+.+... .
T Consensus 6 ~~~~vlVtGa-sggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 6 QGKVSLVTGS-TRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYG-VKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcC-CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 4567776665 55555444 44576 899999998877766555433 23 268899999877531 1
Q ss_pred -CCccEEEEccc
Q 025428 229 -RQFQLVMDKGT 239 (253)
Q Consensus 229 -~~fD~Vi~~~~ 239 (253)
+.+|+|+.+..
T Consensus 83 ~~~~d~vi~~Ag 94 (248)
T 2pnf_A 83 VDGIDILVNNAG 94 (248)
T ss_dssp SSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 36898887654
No 463
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=74.93 E-value=2.9 Score=36.43 Aligned_cols=43 Identities=28% Similarity=0.380 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcC--CCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 162 YLSSWSVLDIGT--GNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 162 ~~~~~~VLDiGc--GtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
..++.+||-+|+ |.|..+..+++. |+ +|+++|.+++.++.+++
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRS 212 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHH
Confidence 467889999998 577777777765 76 99999999888877664
No 464
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=74.92 E-value=13 Score=30.94 Aligned_cols=76 Identities=14% Similarity=0.132 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeC-CHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C-
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDY-SEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E- 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~-s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~- 228 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++. +++.++...+.+...+. ++.++.+|+.+... .
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 366788888876554 3555666677 8888775 56666666666655553 78899999987531 0
Q ss_pred -CCccEEEEcccc
Q 025428 229 -RQFQLVMDKGTL 240 (253)
Q Consensus 229 -~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 94 ~g~id~lvnnAg~ 106 (270)
T 3is3_A 94 FGHLDIAVSNSGV 106 (270)
T ss_dssp HSCCCEEECCCCC
T ss_pred cCCCCEEEECCCC
Confidence 467888866543
No 465
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=74.87 E-value=5.1 Score=34.65 Aligned_cols=45 Identities=22% Similarity=0.175 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCCc-HHHHHHHh-cCCCcEEEEeCCHHHHHHHHHH
Q 025428 162 YLSSWSVLDIGTGNG-LLLQELSK-QGFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 162 ~~~~~~VLDiGcGtG-~~~~~la~-~g~~~v~gvD~s~~~l~~ar~~ 206 (253)
..++.+||=+|+|.+ .++..+++ .+..+|+++|.+++-++.+++.
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~ 207 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI 207 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc
Confidence 467889999999864 44555554 4566999999999988877754
No 466
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=74.87 E-value=9 Score=32.08 Aligned_cols=75 Identities=15% Similarity=0.322 Sum_probs=49.3
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----------CC
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----------ER 229 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----------~~ 229 (253)
..++++|=.|++.|. ++..|++.|+ +|+.++.++...+.++ .+...+ .++.++.+|+.+... .+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~g 105 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVAD-EIADGG-GSAEAVVADLADLEGAANVAEELAATR 105 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHH-HHHTTT-CEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHH-HHHhcC-CcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 367788888876653 4556666787 8999997654444333 333333 368899999987531 14
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 106 ~iD~lv~nAg~ 116 (273)
T 3uf0_A 106 RVDVLVNNAGI 116 (273)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 78988876543
No 467
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=74.78 E-value=11 Score=32.44 Aligned_cols=60 Identities=17% Similarity=0.096 Sum_probs=41.6
Q ss_pred CCCEEEEEcCCCcHHH----HHHHhcCCCcEEEEe-CCHHHHHHHHHHHH-hcCCCceEEEEeccCCCc
Q 025428 164 SSWSVLDIGTGNGLLL----QELSKQGFSDLTGVD-YSEDAINLAQSLAN-RDGFSCIKFLVDDVLDTK 226 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~----~~la~~g~~~v~gvD-~s~~~l~~ar~~~~-~~g~~~i~~~~~D~~~~~ 226 (253)
.++++|=.|++ |.++ ..|++.|+ +|+.++ .+++.++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 45 ~~k~~lVTGas-~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 45 TVPVALVTGAA-KRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 110 (328)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCch
Confidence 45677766655 4444 44455577 899999 99988777766654 334 36889999998764
No 468
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=74.72 E-value=11 Score=30.53 Aligned_cols=71 Identities=10% Similarity=0.078 Sum_probs=47.0
Q ss_pred CEEEEEcCCCcHHHHH----HHhcCCCcEEEEeCCHHHHHHHHHHH-HhcCCCceEEEEeccCCCcC-----C------C
Q 025428 166 WSVLDIGTGNGLLLQE----LSKQGFSDLTGVDYSEDAINLAQSLA-NRDGFSCIKFLVDDVLDTKL-----E------R 229 (253)
Q Consensus 166 ~~VLDiGcGtG~~~~~----la~~g~~~v~gvD~s~~~l~~ar~~~-~~~g~~~i~~~~~D~~~~~~-----~------~ 229 (253)
+++|=.|++ |.++.. |+++|+ +|+.++.++..++...+.+ ...+ .++.++.+|+.+... . +
T Consensus 3 k~vlItGas-ggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 3 RVAIVTGAS-SGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYA-DKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTG-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 467777754 555444 445576 8999999988776655544 2222 368899999987531 1 3
Q ss_pred CccEEEEccc
Q 025428 230 QFQLVMDKGT 239 (253)
Q Consensus 230 ~fD~Vi~~~~ 239 (253)
.+|+++.+..
T Consensus 80 ~id~li~~Ag 89 (250)
T 2cfc_A 80 AIDVLVNNAG 89 (250)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899887654
No 469
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=74.68 E-value=4.1 Score=35.10 Aligned_cols=45 Identities=24% Similarity=0.203 Sum_probs=36.3
Q ss_pred cCCCCCEEEEEc--CCCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHHH
Q 025428 161 KYLSSWSVLDIG--TGNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQSL 206 (253)
Q Consensus 161 ~~~~~~~VLDiG--cGtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~~ 206 (253)
+..++.+||-+| +|.|..+..+++. |+ +|++++.+++.++.+++.
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ 184 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKAL 184 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc
Confidence 346788999998 3578888888876 77 999999999998888753
No 470
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=74.62 E-value=21 Score=30.35 Aligned_cols=70 Identities=19% Similarity=0.236 Sum_probs=42.3
Q ss_pred CCCCEEEEEcCC-CcH-HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcCCCCccEEEEcc
Q 025428 163 LSSWSVLDIGTG-NGL-LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKLERQFQLVMDKG 238 (253)
Q Consensus 163 ~~~~~VLDiGcG-tG~-~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~~~~fD~Vi~~~ 238 (253)
..++++|=+|+| .|. +...|+..|+.+|+.++.+++..+...+.+...+ ++... ++.++. ..+|+|+..-
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~~~~~--~~~~l~--~~aDiIInaT 195 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--EVKAQ--AFEQLK--QSYDVIINST 195 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--CEEEE--EGGGCC--SCEEEEEECS
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--CeeEe--eHHHhc--CCCCEEEEcC
Confidence 467899999986 122 2344555687799999999876655544443322 23333 333332 5688887643
No 471
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=74.60 E-value=9.2 Score=31.01 Aligned_cols=73 Identities=11% Similarity=0.068 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCCcHHHHH----HHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------
Q 025428 164 SSWSVLDIGTGNGLLLQE----LSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~----la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------ 228 (253)
+++++|=.|+ +|.++.. |+++|+ +|++++.++..++...+.+... .++.++.+|+.+... .
T Consensus 5 ~~k~vlVtGa-sggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 5 DGKVAIITGG-TLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCC-CChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcc--CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4567777765 4555544 445577 8999999988776655544221 368999999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+.+|+++.+..+
T Consensus 81 ~~id~li~~Ag~ 92 (251)
T 1zk4_A 81 GPVSTLVNNAGI 92 (251)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368988876543
No 472
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=74.44 E-value=6.3 Score=32.09 Aligned_cols=73 Identities=12% Similarity=0.153 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCCcHHHHHHH----hcCCCcEEEEeCC-HHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C-----
Q 025428 164 SSWSVLDIGTGNGLLLQELS----KQGFSDLTGVDYS-EDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la----~~g~~~v~gvD~s-~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~----- 228 (253)
.+++||=.|+ +|.++..++ ++|+ +|++++.+ +..++...+.+...+ .++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGa-sggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 6 KGKRVLITGS-SQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADG-GDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4567776664 555555444 4576 89999998 666665555554444 368899999987531 1
Q ss_pred -CCccEEEEccc
Q 025428 229 -RQFQLVMDKGT 239 (253)
Q Consensus 229 -~~fD~Vi~~~~ 239 (253)
+.+|+|+.+..
T Consensus 83 ~g~id~vi~~Ag 94 (258)
T 3afn_B 83 FGGIDVLINNAG 94 (258)
T ss_dssp HSSCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 37899987654
No 473
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=74.42 E-value=6 Score=33.35 Aligned_cols=75 Identities=16% Similarity=0.222 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHH-------HHHHHHHHHHhcCCCceEEEEeccCCCcC------
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSED-------AINLAQSLANRDGFSCIKFLVDDVLDTKL------ 227 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~-------~l~~ar~~~~~~g~~~i~~~~~D~~~~~~------ 227 (253)
.++++|=.|++.|. ++..|+++|+ +|+.++.++. .++...+.+...+. ++.++.+|+.+...
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~ 85 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRDGDAVAAAVA 85 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHH
Confidence 56788888877653 4555666677 8999999875 34444444444443 78999999987531
Q ss_pred ---C--CCccEEEEcccc
Q 025428 228 ---E--RQFQLVMDKGTL 240 (253)
Q Consensus 228 ---~--~~fD~Vi~~~~l 240 (253)
. +..|+++.+.-+
T Consensus 86 ~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 86 KTVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHHSCCSEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 1 478988876644
No 474
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=74.35 E-value=9.8 Score=33.82 Aligned_cols=67 Identities=18% Similarity=0.086 Sum_probs=47.8
Q ss_pred CCCEEEEEcCCCcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCc--eEEEEeccCCCcCCCCccEEEE
Q 025428 164 SSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSC--IKFLVDDVLDTKLERQFQLVMD 236 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~--i~~~~~D~~~~~~~~~fD~Vi~ 236 (253)
.+.+||.++.+.|.++..++.. .++.+.-|--...-.+.|++.+++.. +++.. ..+ ..+..||+|+.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~--~~~-~~~~~~~~v~~ 106 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLD--STA-DYPQQPGVVLI 106 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEE--TTS-CCCSSCSEEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEecc--ccc-ccccCCCEEEE
Confidence 4468999999999999998865 34555446666667788899998864 55543 222 23467898886
No 475
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=74.23 E-value=10 Score=30.88 Aligned_cols=73 Identities=12% Similarity=0.186 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC------C-CCcc
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL------E-RQFQ 232 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~------~-~~fD 232 (253)
.++++||=.|++.|. ++..|+++|+ +|+.++.+++.++...+.+. .++.+..+|+.+... . +..|
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 467788888776553 3455556677 89999999988776655442 368889999877431 1 4689
Q ss_pred EEEEcccc
Q 025428 233 LVMDKGTL 240 (253)
Q Consensus 233 ~Vi~~~~l 240 (253)
+++.+.-+
T Consensus 87 ~li~~Ag~ 94 (249)
T 3f9i_A 87 ILVCNAGI 94 (249)
T ss_dssp EEEECCC-
T ss_pred EEEECCCC
Confidence 88876643
No 476
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=73.95 E-value=12 Score=30.72 Aligned_cols=72 Identities=13% Similarity=0.122 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCCcHHHH----HHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------
Q 025428 164 SSWSVLDIGTGNGLLLQ----ELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~----~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------ 228 (253)
.+++||=.|++ |.++. .|+++|+ +|++++.++...+...+.+... .++.++.+|+.+... .
T Consensus 15 ~~k~vlITGas-ggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 15 QDKVAIITGGA-GGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSP--DVISFVHCDVTKDEDVRNLVDTTIAKH 90 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56788877764 55544 4445577 8999999987665544433211 268999999987531 1
Q ss_pred CCccEEEEccc
Q 025428 229 RQFQLVMDKGT 239 (253)
Q Consensus 229 ~~fD~Vi~~~~ 239 (253)
+..|+++.+..
T Consensus 91 ~~id~li~~Ag 101 (278)
T 2bgk_A 91 GKLDIMFGNVG 101 (278)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 36898887654
No 477
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=73.94 E-value=1.7 Score=33.22 Aligned_cols=68 Identities=22% Similarity=0.184 Sum_probs=40.3
Q ss_pred CCCCEEEEEcCCC-cHHH-HHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc----CC-CCccEEE
Q 025428 163 LSSWSVLDIGTGN-GLLL-QELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK----LE-RQFQLVM 235 (253)
Q Consensus 163 ~~~~~VLDiGcGt-G~~~-~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~----~~-~~fD~Vi 235 (253)
..+.+|+=+|||. |... ..|...|. +|+++|.+++.++.++. .. .+.++.+|..+.. .. ..+|+|+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---~~---g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---EF---SGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---TC---CSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---cC---CCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 4667999999853 3322 33334466 89999999876543321 11 3456777764421 11 4578887
Q ss_pred Ec
Q 025428 236 DK 237 (253)
Q Consensus 236 ~~ 237 (253)
..
T Consensus 90 ~~ 91 (155)
T 2g1u_A 90 AF 91 (155)
T ss_dssp EC
T ss_pred EE
Confidence 63
No 478
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=73.67 E-value=3.8 Score=35.41 Aligned_cols=42 Identities=12% Similarity=0.209 Sum_probs=34.6
Q ss_pred cCCCCCEEEEEcC--CCcHHHHHHHhc-CCCcEEEEeCCHHHHHHH
Q 025428 161 KYLSSWSVLDIGT--GNGLLLQELSKQ-GFSDLTGVDYSEDAINLA 203 (253)
Q Consensus 161 ~~~~~~~VLDiGc--GtG~~~~~la~~-g~~~v~gvD~s~~~l~~a 203 (253)
+..++.+||-+|+ |.|..+..+++. |+ +|++++.+++.++.+
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFL 190 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 4467889999998 567888777776 66 999999999888777
No 479
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=73.51 E-value=6.2 Score=33.93 Aligned_cols=76 Identities=13% Similarity=0.134 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCC----------HHHHHHHHHHHHhcCCCceEEEEeccCCCcC--
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYS----------EDAINLAQSLANRDGFSCIKFLVDDVLDTKL-- 227 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s----------~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-- 227 (253)
..++++|=.|++.|. ++..|++.|+ +|+.+|.+ ...++...+.+...+. ++.++.+|+.+...
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~ 102 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG-EAVADGSNVADWDQAA 102 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC-EEEEECCCTTSHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHH
Confidence 356788888866553 3455666677 99999987 5566666665555553 68889999987531
Q ss_pred ---C------CCccEEEEcccc
Q 025428 228 ---E------RQFQLVMDKGTL 240 (253)
Q Consensus 228 ---~------~~fD~Vi~~~~l 240 (253)
. +..|+++.+.-+
T Consensus 103 ~~~~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 1 368888876543
No 480
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=73.43 E-value=16 Score=29.91 Aligned_cols=72 Identities=14% Similarity=0.241 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E--R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~--~ 229 (253)
.++++|=.|++.|. ++..|+++|+ +|+.++.+++.++...+.+ + .++.++.+|+.+... . +
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g 82 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEI---G-DAALAVAADISKEADVDAAVEAALSKFG 82 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh---C-CceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 56788888887653 4566666777 8999999998877666543 2 268899999987531 0 3
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 83 ~id~li~~Ag~ 93 (261)
T 3n74_A 83 KVDILVNNAGI 93 (261)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 67988876543
No 481
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=73.14 E-value=15 Score=30.01 Aligned_cols=74 Identities=14% Similarity=0.237 Sum_probs=48.1
Q ss_pred CCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeC-CHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------C
Q 025428 165 SWSVLDIGTGNGL---LLQELSKQGFSDLTGVDY-SEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------R 229 (253)
Q Consensus 165 ~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~-s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------~ 229 (253)
++++|=.|++.|. ++..|++.|+ +|+.++. +++.++...+.+...+. ++.++.+|+.+... . +
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4567766655442 3344555677 8888887 55666666666655553 68899999987531 1 4
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 82 ~id~lv~nAg~ 92 (246)
T 3osu_A 82 SLDVLVNNAGI 92 (246)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78998876644
No 482
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=73.11 E-value=10 Score=31.10 Aligned_cols=72 Identities=14% Similarity=0.285 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.+|.+++.++...+.+ + .++.++.+|+.+... . +
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASI---G-KKARAIAADISDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH---C-TTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---C-CceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 56788888876553 4555666777 8999999998777665543 3 368889999987531 1 4
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 80 ~id~lv~nAg~ 90 (247)
T 3rwb_A 80 GIDILVNNASI 90 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876643
No 483
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=73.01 E-value=12 Score=31.25 Aligned_cols=72 Identities=17% Similarity=0.242 Sum_probs=49.1
Q ss_pred CEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCc--------C-C--CCc
Q 025428 166 WSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTK--------L-E--RQF 231 (253)
Q Consensus 166 ~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~--------~-~--~~f 231 (253)
+++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+... .++.++.+|+.+.. . . +..
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 98 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAK--TRVLPLTLDVRDRAAMSAAVDNLPEEFATL 98 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 678877765542 3455666677 8999999998877665554332 36889999997742 1 1 467
Q ss_pred cEEEEcccc
Q 025428 232 QLVMDKGTL 240 (253)
Q Consensus 232 D~Vi~~~~l 240 (253)
|+++.+.-+
T Consensus 99 D~lvnnAG~ 107 (272)
T 2nwq_A 99 RGLINNAGL 107 (272)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 998876543
No 484
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=72.85 E-value=9.8 Score=32.20 Aligned_cols=75 Identities=15% Similarity=0.169 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCC--HHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----------
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYS--EDAINLAQSLANRDGFSCIKFLVDDVLDTKL----------- 227 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s--~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----------- 227 (253)
+++++|=.|++.|. ++..|++.|+ +|+.++.+ +..++...+.+...+ .++.++.+|+.+...
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECG-RKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTT-CCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcC-CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 56788888876553 3455566677 89999987 345555555555555 378899999987531
Q ss_pred CCCccEEEEcccc
Q 025428 228 ERQFQLVMDKGTL 240 (253)
Q Consensus 228 ~~~fD~Vi~~~~l 240 (253)
-+..|+++.+.-.
T Consensus 126 ~g~iD~lv~nAg~ 138 (294)
T 3r3s_A 126 LGGLDILALVAGK 138 (294)
T ss_dssp HTCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1478998876643
No 485
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=72.63 E-value=9.5 Score=30.85 Aligned_cols=74 Identities=9% Similarity=0.144 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCCcHHHH----HHHhcCCCcEEEE-eCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C-----
Q 025428 164 SSWSVLDIGTGNGLLLQ----ELSKQGFSDLTGV-DYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E----- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~----~la~~g~~~v~gv-D~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~----- 228 (253)
++++||=.|++ |.++. .|+++|+ +|+++ +.++..++...+.+...+ .++.++.+|+.+... .
T Consensus 4 ~~~~vlItGas-ggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T 2hq1_A 4 KGKTAIVTGSS-RGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAG-INVVVAKGDVKNPEDVENMVKTAMDA 80 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTT-CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCC-chHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 45677777754 55444 4455577 89988 566665655555554444 368899999987531 1
Q ss_pred -CCccEEEEcccc
Q 025428 229 -RQFQLVMDKGTL 240 (253)
Q Consensus 229 -~~fD~Vi~~~~l 240 (253)
+..|+|+.+..+
T Consensus 81 ~~~~d~vi~~Ag~ 93 (247)
T 2hq1_A 81 FGRIDILVNNAGI 93 (247)
T ss_dssp HSCCCEEEECC--
T ss_pred cCCCCEEEECCCC
Confidence 368988876543
No 486
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=72.46 E-value=8.9 Score=32.14 Aligned_cols=68 Identities=16% Similarity=0.290 Sum_probs=48.4
Q ss_pred CEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--CCc
Q 025428 166 WSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E--RQF 231 (253)
Q Consensus 166 ~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~--~~f 231 (253)
++||=-|++.|. ++..|++.|+ +|+.+|++++.++...+ .+ .++.++++|+.+... . +..
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~----~~-~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAK----ER-PNLFYFHGDVADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHT----TC-TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----hc-CCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 577877877764 4666777787 99999999877654432 22 378899999987531 1 578
Q ss_pred cEEEEccc
Q 025428 232 QLVMDKGT 239 (253)
Q Consensus 232 D~Vi~~~~ 239 (253)
|+++.+.-
T Consensus 77 DiLVNNAG 84 (247)
T 3ged_A 77 DVLVNNAC 84 (247)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 98887664
No 487
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=72.42 E-value=14 Score=30.32 Aligned_cols=72 Identities=14% Similarity=0.210 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------~ 229 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.+++.++...+.+.. ++.++..|+.+... . +
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGD----NGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGG----GEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcc----cceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 56788888876553 3455666677 899999999887766655432 46788899987531 1 4
Q ss_pred CccEEEEcccc
Q 025428 230 QFQLVMDKGTL 240 (253)
Q Consensus 230 ~fD~Vi~~~~l 240 (253)
..|+++.+.-+
T Consensus 83 ~iD~lv~nAg~ 93 (248)
T 3op4_A 83 GVDILVNNAGI 93 (248)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78998876543
No 488
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=72.41 E-value=13 Score=30.01 Aligned_cols=72 Identities=8% Similarity=0.068 Sum_probs=48.0
Q ss_pred CEEEEEcCCCcHHHHHHH----hcCCC------cEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC--------
Q 025428 166 WSVLDIGTGNGLLLQELS----KQGFS------DLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-------- 227 (253)
Q Consensus 166 ~~VLDiGcGtG~~~~~la----~~g~~------~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-------- 227 (253)
++||=.|+ +|.++..++ +.|+. +|++++.++..++...+.+...+ .++.++.+|+.+...
T Consensus 3 k~vlITGa-sggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 3 HILLITGA-GKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp EEEEEETT-TSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-CEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEECC-CChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-CeeeEEEecCCCHHHHHHHHHHH
Confidence 45676664 555555444 45664 79999999987776666554434 368899999987521
Q ss_pred ---CCCccEEEEccc
Q 025428 228 ---ERQFQLVMDKGT 239 (253)
Q Consensus 228 ---~~~fD~Vi~~~~ 239 (253)
-+..|+++.+..
T Consensus 81 ~~~~g~id~li~~Ag 95 (244)
T 2bd0_A 81 VERYGHIDCLVNNAG 95 (244)
T ss_dssp HHHTSCCSEEEECCC
T ss_pred HHhCCCCCEEEEcCC
Confidence 136898887654
No 489
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=72.39 E-value=3.7 Score=35.53 Aligned_cols=44 Identities=20% Similarity=0.248 Sum_probs=35.3
Q ss_pred cCCCCCEEEEEcC--CCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGT--GNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGc--GtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
+..++.+||-+|+ |.|..+..+++. |+ +|++++.+++.++.+++
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~ 198 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKT 198 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 3467889999997 577777777775 76 89999999988887763
No 490
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=72.37 E-value=9.3 Score=31.73 Aligned_cols=75 Identities=9% Similarity=0.105 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCCcHHH----HHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcC--CCceEEEEeccCCCcC-----C----
Q 025428 164 SSWSVLDIGTGNGLLL----QELSKQGFSDLTGVDYSEDAINLAQSLANRDG--FSCIKFLVDDVLDTKL-----E---- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~----~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g--~~~i~~~~~D~~~~~~-----~---- 228 (253)
.++++|=.|++ |.++ ..|++.|+ +|+.++.+++.++...+.+.... -.++.++.+|+.+... .
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 5 AEKVAIITGSS-NGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 45677777755 4444 44555677 89999999987776665542111 1268899999987531 1
Q ss_pred --CCccEEEEcccc
Q 025428 229 --RQFQLVMDKGTL 240 (253)
Q Consensus 229 --~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 83 ~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 83 KFGKLDILVNNAGA 96 (278)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HcCCCCEEEECCCC
Confidence 378988876543
No 491
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=72.20 E-value=5.3 Score=35.21 Aligned_cols=65 Identities=22% Similarity=0.236 Sum_probs=41.5
Q ss_pred CCCEEEEEcCC-CcHHHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----CCCccEEEEc
Q 025428 164 SSWSVLDIGTG-NGLLLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----ERQFQLVMDK 237 (253)
Q Consensus 164 ~~~~VLDiGcG-tG~~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----~~~fD~Vi~~ 237 (253)
+..+||=+||| +|......+.... +|+..|++...++.+++ .+..+..|+.+... -...|+|+..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~~-~v~~~~~~~~~~~~~~~--------~~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDEF-DVYIGDVNNENLEKVKE--------FATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTTS-EEEEEESCHHHHHHHTT--------TSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CccEEEEECCCHHHHHHHHHHhcCC-CeEEEEcCHHHHHHHhc--------cCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 44689999985 3443333333334 89999999987776543 34566777766431 1578998874
No 492
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=71.88 E-value=4.7 Score=34.79 Aligned_cols=44 Identities=25% Similarity=0.351 Sum_probs=35.3
Q ss_pred cCCCCCEEEEEcC--CCcHHHHHHHhc-CCCcEEEEeCCHHHHHHHHH
Q 025428 161 KYLSSWSVLDIGT--GNGLLLQELSKQ-GFSDLTGVDYSEDAINLAQS 205 (253)
Q Consensus 161 ~~~~~~~VLDiGc--GtG~~~~~la~~-g~~~v~gvD~s~~~l~~ar~ 205 (253)
+..++.+||-+|+ |.|..+..+++. |+ +|++++.+++.++.+++
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKE 191 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 3467889999994 567777777776 66 89999999998887765
No 493
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=71.84 E-value=13 Score=30.78 Aligned_cols=75 Identities=15% Similarity=0.192 Sum_probs=47.4
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEe-CCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC---------C--
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVD-YSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL---------E-- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD-~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~---------~-- 228 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++ .+...++.........+ .++.++.+|+.+... .
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAG-RDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTT-CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45677766655442 3444555577 899998 66666555555444433 378999999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 102 g~id~li~nAg~ 113 (269)
T 3gk3_A 102 GKVDVLINNAGI 113 (269)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 478988876543
No 494
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=71.78 E-value=15 Score=27.56 Aligned_cols=66 Identities=14% Similarity=0.150 Sum_probs=41.4
Q ss_pred CCEEEEEcCCCcHHHHHHHh----cCCCcEEEEeCC-HHHHHHHHHHHHhcCCCceEEEEeccCCCcC----C-CCccEE
Q 025428 165 SWSVLDIGTGNGLLLQELSK----QGFSDLTGVDYS-EDAINLAQSLANRDGFSCIKFLVDDVLDTKL----E-RQFQLV 234 (253)
Q Consensus 165 ~~~VLDiGcGtG~~~~~la~----~g~~~v~gvD~s-~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----~-~~fD~V 234 (253)
..+|+=+|+ |.++..+++ .|. +|+.+|.+ ++.++....... ..+.++.+|..+... . ...|+|
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~----~~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc----CCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence 346777776 666655554 365 89999997 454444433221 247889999876431 2 567888
Q ss_pred EEc
Q 025428 235 MDK 237 (253)
Q Consensus 235 i~~ 237 (253)
+..
T Consensus 76 i~~ 78 (153)
T 1id1_A 76 LAL 78 (153)
T ss_dssp EEC
T ss_pred EEe
Confidence 763
No 495
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=71.76 E-value=10 Score=31.22 Aligned_cols=61 Identities=13% Similarity=0.086 Sum_probs=41.1
Q ss_pred CCCEEEEEcCCCcH---HHHHHHh---cCCCcEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEeccCCC
Q 025428 164 SSWSVLDIGTGNGL---LLQELSK---QGFSDLTGVDYSEDAINLAQSLANRDG-FSCIKFLVDDVLDT 225 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~---~g~~~v~gvD~s~~~l~~ar~~~~~~g-~~~i~~~~~D~~~~ 225 (253)
.++++|=.|++.|. ++..|++ .|+ +|+.++.+++.++...+.+.... -.++.++.+|+.+.
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~ 72 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE 72 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCH
Confidence 45567777765443 3444555 566 89999999988877666554431 13688999999874
No 496
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=71.56 E-value=7.3 Score=32.36 Aligned_cols=74 Identities=16% Similarity=0.140 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC-----C------C
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL-----E------R 229 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~-----~------~ 229 (253)
.++++|=.|++.|. ++..|+++|+ +|+.++.++..++...+.+...+ .++.++.+|+.+... . +
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 110 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYG-VHSKAYKCNISDPKSVEETISQQEKDFG 110 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHC-SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 56778877765442 3444555677 89999998765555544444334 368899999987531 1 3
Q ss_pred CccEEEEccc
Q 025428 230 QFQLVMDKGT 239 (253)
Q Consensus 230 ~fD~Vi~~~~ 239 (253)
.+|+|+.+..
T Consensus 111 ~id~li~~Ag 120 (279)
T 3ctm_A 111 TIDVFVANAG 120 (279)
T ss_dssp CCSEEEECGG
T ss_pred CCCEEEECCc
Confidence 5898887654
No 497
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=71.37 E-value=16 Score=30.10 Aligned_cols=75 Identities=16% Similarity=0.210 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEeccCCCcC-----C------
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDG-FSCIKFLVDDVLDTKL-----E------ 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g-~~~i~~~~~D~~~~~~-----~------ 228 (253)
.++++|=.|++.|. ++..|++.|+ +|++++.+++.++...+.+.... -.++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 45678888865442 3444555677 89999999887765555443221 1258899999987521 0
Q ss_pred CCccEEEEccc
Q 025428 229 RQFQLVMDKGT 239 (253)
Q Consensus 229 ~~fD~Vi~~~~ 239 (253)
+..|+++.+.-
T Consensus 85 g~id~lv~~Ag 95 (267)
T 2gdz_A 85 GRLDILVNNAG 95 (267)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 35788887654
No 498
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=71.30 E-value=9.2 Score=31.50 Aligned_cols=74 Identities=12% Similarity=0.179 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCCcHHHH----HHHhcCCCcEEEEeCCHHH-HHHHHHHHHhc-CCCceEEEEeccCCCcC-----C----
Q 025428 164 SSWSVLDIGTGNGLLLQ----ELSKQGFSDLTGVDYSEDA-INLAQSLANRD-GFSCIKFLVDDVLDTKL-----E---- 228 (253)
Q Consensus 164 ~~~~VLDiGcGtG~~~~----~la~~g~~~v~gvD~s~~~-l~~ar~~~~~~-g~~~i~~~~~D~~~~~~-----~---- 228 (253)
.++++|=.|++. .++. .|++.|+ +|+.++.++.. ++...+.+... + .++.++.+|+.+... .
T Consensus 3 ~~k~vlVTGas~-gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 3 KGKVAVVTGSTS-GIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHG-VKVLYDGADLSKGEAVRGLVDNAVR 79 (260)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHT-SCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 356777777554 4444 4455577 89999998876 66555544332 4 268888999987531 1
Q ss_pred --CCccEEEEcccc
Q 025428 229 --RQFQLVMDKGTL 240 (253)
Q Consensus 229 --~~fD~Vi~~~~l 240 (253)
+..|+++.+.-+
T Consensus 80 ~~g~iD~lv~~Ag~ 93 (260)
T 1x1t_A 80 QMGRIDILVNNAGI 93 (260)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hcCCCCEEEECCCC
Confidence 368998876543
No 499
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=71.22 E-value=9.1 Score=32.21 Aligned_cols=75 Identities=12% Similarity=0.132 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCHHHHHHHHHHHHhcCCCceEEEEeccCCCcC----------C-
Q 025428 163 LSSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSEDAINLAQSLANRDGFSCIKFLVDDVLDTKL----------E- 228 (253)
Q Consensus 163 ~~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~~~l~~ar~~~~~~g~~~i~~~~~D~~~~~~----------~- 228 (253)
.+++.+|=-|++.|. ++..|++.|+ +|+.++.+++..+.+.+..+ .+ .++.++.+|+.+... .
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~-~~-~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQ-RQ-PRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHH-HC-TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHh-cC-CCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 477899999988876 4677778887 89999998765554444333 33 368899999987531 1
Q ss_pred CCccEEEEcccc
Q 025428 229 RQFQLVMDKGTL 240 (253)
Q Consensus 229 ~~fD~Vi~~~~l 240 (253)
++.|+++.+.-+
T Consensus 82 G~iDiLVNnAGi 93 (258)
T 4gkb_A 82 GRLDGLVNNAGV 93 (258)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 678999887654
No 500
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=71.07 E-value=11 Score=31.52 Aligned_cols=75 Identities=8% Similarity=0.114 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCCcH---HHHHHHhcCCCcEEEEeCCH-HHHHHHHHHHH-hcCCCceEEEEeccCC----Cc-----C--
Q 025428 164 SSWSVLDIGTGNGL---LLQELSKQGFSDLTGVDYSE-DAINLAQSLAN-RDGFSCIKFLVDDVLD----TK-----L-- 227 (253)
Q Consensus 164 ~~~~VLDiGcGtG~---~~~~la~~g~~~v~gvD~s~-~~l~~ar~~~~-~~g~~~i~~~~~D~~~----~~-----~-- 227 (253)
.++++|=.|++.|. ++..|++.|+ +|+.++.++ +.++...+.+. ..+ .++.++.+|+.+ .. +
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERS-NTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcC-CceEEEEeecCCccCCHHHHHHHHHH
Confidence 45677777765442 3444555677 899999997 66665555544 333 368899999988 32 0
Q ss_pred ----CCCccEEEEcccc
Q 025428 228 ----ERQFQLVMDKGTL 240 (253)
Q Consensus 228 ----~~~fD~Vi~~~~l 240 (253)
-+..|+++.+.-+
T Consensus 100 ~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 0468999876643
Done!