BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025436
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7ZZ00|ZN511_DANRE Zinc finger protein 511 OS=Danio rerio GN=znf511 PE=2 SV=1
Length = 277
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 113/221 (51%), Gaps = 20/221 (9%)
Query: 23 FRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLE 82
F + +F G+I R + + + F +D++ ++E C I GC +LE
Sbjct: 59 FAVEDEYFEDGDINRHMYLQNIVTSFVDDKQ---PPTISE----FRCHIAGCKQLFDTLE 111
Query: 83 EFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLK 142
+E HYNA H CS C R +P++RLL IH+ E HDS FQ +A MYECLVEGCGLK
Sbjct: 112 GYEHHYNALHRNVCSNCKRSFPSNRLLEIHILEWHDSLFQI-MAEKQCMYECLVEGCGLK 170
Query: 143 FKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQRKQ--------ALQKKEASSSM 194
FK K R+ HL+ H +P F F K + +K Q+K+ + ++E+S SM
Sbjct: 171 FKTSKERKDHLIRTHSYPADFRFDKSKKIGRTTEKKTQQKKDAHMEVSATVLQQESSESM 230
Query: 195 EV----EDETIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGL 231
+ E + + +A K S PSS+ FG+ RG
Sbjct: 231 DFSLTPEPVETEPMQAANLKPRYSYKVPSSICFGQGSVRGF 271
>sp|Q6P0X2|ZN511_MOUSE Zinc finger protein 511 OS=Mus musculus GN=Znf511 PE=2 SV=2
Length = 227
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 23 FRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLE 82
F D FF G+++R L + + SE + ++MV E C + GC ++E
Sbjct: 43 FPRDHEFFEDGDVQRHLYLQDMLTQVSETPE---KSMVPE----FTCQVAGCCQVFAAIE 95
Query: 83 EFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLK 142
+++ HY+ H +CS C R +P+ LL +H+ E HDS FQ +A+ MY+CLVE C K
Sbjct: 96 DYQHHYHMMHGNTCSFCNRAFPSGHLLDVHILEWHDSLFQI-LAQRQDMYQCLVESCPEK 154
Query: 143 FKNYKSRQQHLVDKHKFPTSFEFFK 167
FK + R+ H+V H +P F F K
Sbjct: 155 FKTSQDRKDHMVRLHLYPADFRFDK 179
>sp|Q8NB15|ZN511_HUMAN Zinc finger protein 511 OS=Homo sapiens GN=ZNF511 PE=2 SV=1
Length = 262
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Query: 29 FFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGR--RVCCPIVGCNARMRSLEEFED 86
FF G+++R L + V + ++ V E R C + GC +L+++E
Sbjct: 49 FFEDGDVQRHLYLQDVIMQVAD---------VPEKPRVPAFACQVAGCCQVFDALDDYEH 99
Query: 87 HYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNY 146
HY+ H CS C R +P+ LL H+ E HDS FQ R MY+CLVEGC KFK
Sbjct: 100 HYHTLHGNVCSFCKRAFPSGHLLDAHILEWHDSLFQILSER-QDMYQCLVEGCTEKFKTS 158
Query: 147 KSRQQHLVDKHKFPTSFEFFK 167
+ R+ H+V H +P F F K
Sbjct: 159 RDRKDHMVRMHLYPADFRFDK 179
>sp|Q9V574|L2K1_DROME Protein lethal(2)k10201 OS=Drosophila melanogaster GN=l(2)k10201
PE=4 SV=2
Length = 221
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 86 DHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARG-YPMYECLVEGCGLKFK 144
D+ + + SC C ++ PT+ LL +H++E HD +F A V RG PM+ C +E C +KF
Sbjct: 66 DNIDKEQSYSCVECRKMLPTAHLLDLHITEQHDCYFAASVERGDKPMFSCFLEECTIKFH 125
Query: 145 NYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQRKQALQKKEASSSMEVEDETIDGL 204
+ R+ H + HK P ++ F KN+ KQ Q K +SMEV DE I+
Sbjct: 126 TARQRKDHCIITHKLPANYRF---------DHSKNRGKQKHQGKSKPNSMEV-DEVIEET 175
Query: 205 VSA--VSKLSTSDSTPSSVSFGRRHTRGLTF 233
S V S T S G+ G T
Sbjct: 176 KSLPYVKAFSFGHQTQRSFYTGKDQRSGKTL 206
>sp|Q5U2S3|ZUFSP_RAT Zinc finger with UFM1-specific peptidase domain protein OS=Rattus
norvegicus GN=Zufsp PE=2 SV=1
Length = 577
Score = 38.1 bits (87), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 96 CSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGY-PMYECLVEGCGLKFKNYKSRQQHLV 154
C C R+ S+ + IHV H S ++ + + P+Y+C + CGL NY Q+H V
Sbjct: 155 CPFCGRIERYSQDMEIHVKTKHASLLESPLEDCHQPLYDCPM--CGLVCTNYHILQEH-V 211
Query: 155 DKHKFPTSFE 164
D H +SF+
Sbjct: 212 DLHLEESSFQ 221
>sp|Q5EAC5|ZN410_BOVIN Zinc finger protein 410 OS=Bos taurus GN=ZNF410 PE=2 SV=1
Length = 467
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 18/146 (12%)
Query: 53 KYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDH---YNARHTASC--SVCCRVYPTSR 107
KY L+ + R CP GC L+ + H +N C S C + + T+
Sbjct: 237 KYHLKTH--RNDRSFICPAAGCGKSFYVLQRLKVHMRTHNGEKPFVCPESNCGKQFTTAG 294
Query: 108 LLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHL-VDKHKFPTSFEFF 166
L H+ ++ G + C +GCG F Y S ++HL V + P +
Sbjct: 295 NLKNHL----------RIHTGEKPFLCEAQGCGRSFAEYSSLRKHLVVHSGEKPHQCQVC 344
Query: 167 KKAHPSKKQRQKNQRKQALQKKEASS 192
K R + RK LQ A S
Sbjct: 345 GKTFSQSGSRNVHMRKHHLQMGAAGS 370
>sp|Q9YIB7|ZIC2B_XENLA Zinc finger protein ZIC 2-B OS=Xenopus laevis GN=zic2-b PE=2 SV=1
Length = 497
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 99 CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHL-VDKH 157
C +V+ S L IH + G ++C EGC +F N R++H+ V
Sbjct: 357 CGKVFARSENLKIH----------KRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTS 406
Query: 158 KFPTSFEFFKKA--HPSKKQRQKNQRKQALQKKEAS--SSMEVEDETIDGLVSAVSKLST 213
P + K+ HPS ++ + + Q E+S +S E T GLVS S+
Sbjct: 407 DKPYLCKMCDKSYTHPSSLRKHMKVHESSPQGSESSPAASSGYESSTPPGLVSPNSETQN 466
Query: 214 SDSTPSSVS 222
+ +P++VS
Sbjct: 467 PNLSPAAVS 475
>sp|Q7KHG2|JING_DROME Zinc finger protein jing OS=Drosophila melanogaster GN=jing PE=2 SV=1
Length = 1486
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 22/95 (23%)
Query: 74 CNARMRSLEEFEDHYNARHT-------ASCSVCCRVYP----TSRLLSIHVSEAHDSFFQ 122
CN + S + DH H A V C+VY + R L HV +H
Sbjct: 1155 CNKKHESNSKLLDHMQTHHVNTQTGPFACLWVGCKVYNKESCSRRWLERHV-LSHG---- 1209
Query: 123 AKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKH 157
G ++C+VEGCGL+F + + Q+H V+ H
Sbjct: 1210 -----GSKQFKCIVEGCGLRFGSQLALQKH-VNNH 1238
>sp|Q8BKX7|ZN410_MOUSE Zinc finger protein 410 OS=Mus musculus GN=Znf410 PE=2 SV=2
Length = 478
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 62/161 (38%), Gaps = 20/161 (12%)
Query: 53 KYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDH---YNARHTASC--SVCCRVYPTSR 107
KY L+ E R CP GC L+ + H +N C S C + + T+
Sbjct: 237 KYHLKTHRNE--RSFICPAEGCGKSFYVLQRLKVHMRTHNGEKPFMCHESGCGKQFTTAG 294
Query: 108 LLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHL-VDKHKFPTSFEFF 166
L H ++ G + C +GCG F Y S ++HL V + P +
Sbjct: 295 NLKNH----------RRIHTGEKPFLCEAQGCGRSFAEYSSLRKHLVVHSGEKPHQCQVC 344
Query: 167 KKAHPSKKQRQKNQRKQALQKKEASSSMEVEDETIDGLVSA 207
K R + RK LQ S + +D+T + L+ +
Sbjct: 345 GKTFSQSGSRNVHMRKHHLQLGTTGS--QEQDQTAEPLMGS 383
>sp|Q86VK4|ZN410_HUMAN Zinc finger protein 410 OS=Homo sapiens GN=ZNF410 PE=1 SV=2
Length = 478
Score = 34.3 bits (77), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 54/146 (36%), Gaps = 18/146 (12%)
Query: 53 KYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDH---YNARHTASC--SVCCRVYPTSR 107
KY L+ + R CP GC L+ + H +N C S C + + T+
Sbjct: 237 KYHLKTH--RNDRSFICPAEGCGKSFYVLQRLKVHMRTHNGEKPFMCHESGCGKQFTTAG 294
Query: 108 LLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHL-VDKHKFPTSFEFF 166
L H ++ G + C +GCG F Y S ++HL V + P +
Sbjct: 295 NLKNH----------RRIHTGEKPFLCEAQGCGRSFAEYSSLRKHLVVHSGEKPHQCQVC 344
Query: 167 KKAHPSKKQRQKNQRKQALQKKEASS 192
K R + RK LQ A S
Sbjct: 345 GKTFSQSGSRNVHMRKHHLQLGAAGS 370
>sp|Q8WYB5|KAT6B_HUMAN Histone acetyltransferase KAT6B OS=Homo sapiens GN=KAT6B PE=1 SV=3
Length = 2073
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 113 VSEAHDSFFQAKVARGYPMYECLVEGCGLKFK-NYKSRQQHLV-DKHKFPTSFEFFKKAH 170
V E ++F V G+ E L++ CG+ + S + L D P S E
Sbjct: 1452 VLENQETFLDLNVQPGHSNPEVLMD-CGVDLTASCNSEPKELAGDPEAVPESDEEPPPGE 1510
Query: 171 PSKKQRQKNQRKQALQKKEAS-SSMEVEDETIDGLVSAVSKLSTSDST 217
++KQ QKN ++ + KE + ++ME++ ET+ + S + S D T
Sbjct: 1511 QAQKQDQKNSKEVDTEFKEGNPATMEIDSETVQAVQSLTQESSEQDDT 1558
>sp|P39933|TF3A_YEAST Transcription factor IIIA OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PZF1 PE=1 SV=1
Length = 429
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 69 CPIVGCNARMRSLEEFEDHYNA--RHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVA 126
CP GCN R + H + H +C C + + L H+S+ HD +
Sbjct: 136 CPEEGCNLRFYKHPQLRAHILSVHLHKLTCPHCNKSFQRPYRLRNHISKHHDPEVENP-- 193
Query: 127 RGYPMYECLVEGCGLKFKNYKSRQQHLVDKH 157
Y+C GC +F+ + Q H+ + H
Sbjct: 194 -----YQCTFAGCCKEFRIWSQLQSHIKNDH 219
>sp|Q62521|ZIC3_MOUSE Zinc finger protein ZIC 3 OS=Mus musculus GN=Zic3 PE=1 SV=2
Length = 466
Score = 34.3 bits (77), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 15/136 (11%)
Query: 99 CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHL-VDKH 157
C +++ S L IH + G ++C EGC +F N R++H+ V
Sbjct: 334 CGKIFARSENLKIH----------KRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 383
Query: 158 KFPTSFEFFKKA--HPSKKQRQKNQRKQALQKKEASSSMEVEDETIDGLVSAVSKLSTSD 215
P + K+ HPS ++ + ++S E T + SA SK +T
Sbjct: 384 DKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAIASANSKDTT-- 441
Query: 216 STPSSVSFGRRHTRGL 231
TPS+V H GL
Sbjct: 442 KTPSAVQTSTSHNPGL 457
>sp|O60481|ZIC3_HUMAN Zinc finger protein ZIC 3 OS=Homo sapiens GN=ZIC3 PE=1 SV=1
Length = 467
Score = 34.3 bits (77), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 15/136 (11%)
Query: 99 CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHL-VDKH 157
C +++ S L IH + G ++C EGC +F N R++H+ V
Sbjct: 335 CGKIFARSENLKIH----------KRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 384
Query: 158 KFPTSFEFFKKA--HPSKKQRQKNQRKQALQKKEASSSMEVEDETIDGLVSAVSKLSTSD 215
P + K+ HPS ++ + ++S E T + SA SK +T
Sbjct: 385 DKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAIASANSKDTT-- 442
Query: 216 STPSSVSFGRRHTRGL 231
TPS+V H GL
Sbjct: 443 KTPSAVQTSTSHNPGL 458
>sp|Q2QGD7|ZXDC_HUMAN Zinc finger protein ZXDC OS=Homo sapiens GN=ZXDC PE=1 SV=2
Length = 858
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARHTAS----CSV--CCRVYPTSRLLSIHVSE 115
+D RR CP+ GC E + H + H + C V CC + L IH S+
Sbjct: 383 DDDRRFTCPVEGCGKSFTRAEHLKGH-SITHLGTKPFECPVEGCCARFSARSSLYIH-SK 440
Query: 116 AHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKH 157
H G P C V C F + S + H+V +H
Sbjct: 441 KHVQDV------GAPKSRCPVSTCNRLFTSKHSMKAHMVRQH 476
>sp|Q8C8V1|ZXDC_MOUSE Zinc finger protein ZXDC OS=Mus musculus GN=Zxdc PE=2 SV=1
Length = 858
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARHTAS----CSV--CCRVYPTSRLLSIHVSE 115
+D RR CP+ GC E + H + H + C V CC + L IH S+
Sbjct: 384 DDDRRFTCPVEGCGKSFTRAEHLKGH-SITHLGTKPFECPVEGCCARFSARSSLYIH-SK 441
Query: 116 AHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKH 157
H G P C V C F + S + H+V +H
Sbjct: 442 KHLQDV------GTPKSRCPVSSCNRLFTSKHSMKAHVVRQH 477
>sp|P25066|P43_XENBO P43 5S RNA-binding protein OS=Xenopus borealis PE=2 SV=1
Length = 365
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 16/124 (12%)
Query: 69 CPIVGCNARMRSLEEFEDHYNARHTAS----CSV--CCRVYPTSRLLSIHVSEAHDSFFQ 122
CP GC + + H +H + CSV C R + R L IHVSE +
Sbjct: 77 CPTAGCKMTFSTKKSLSRHKLYKHGDAVPLKCSVPGCKRSFRKKRALRIHVSEHSNE--- 133
Query: 123 AKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQRK 182
P+ C V GCG K + H + S+E + P+ Q + +K
Sbjct: 134 -------PLSVCDVPGCGWKSTSAAKLAAHHRRHGGYRCSYEDCQTVSPTWTALQTHLKK 186
Query: 183 QALQ 186
L+
Sbjct: 187 HPLE 190
>sp|P79797|TF3A_ICTPU Transcription factor IIIA OS=Ictalurus punctatus GN=gtf3a PE=2 SV=1
Length = 322
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 69 CPIVGCNARMRSLEEFEDHYNARH--TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVA 126
C GC+ + R E++ H A H C C +V+ + L + H F V
Sbjct: 161 CAEEGCDFQGRMWTEYQAHRKAAHREALQCDSCAKVFHKAWFL-----KKHKLFVHLGVR 215
Query: 127 RGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSF 163
R +++C EGC + + + Q H++ H+ SF
Sbjct: 216 R---VFKCTKEGCQKTYTTHFNLQNHILSFHEGIRSF 249
>sp|Q9UTL5|TF3A_SCHPO Transcription factor IIIA OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=sfc2 PE=2 SV=1
Length = 374
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 11/116 (9%)
Query: 53 KYQLENMVTEDGRRVC---CPIVGCNAR--MRSLEEFEDHYNARHTASCSVCCRVYPTSR 107
K +L+N V ++ CP C + ++H H SCS+C R + T+
Sbjct: 158 KQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVPSCSICGRQFKTAA 217
Query: 108 LLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSF 163
L HV + + K Y C +EGC F + ++H+ H+ +F
Sbjct: 218 HLRHHVVLHQTTLEERKT------YHCPMEGCKKSFTRSSALKKHISVIHEGNMAF 267
>sp|O97592|DMD_CANFA Dystrophin OS=Canis familiaris GN=DMD PE=2 SV=1
Length = 3680
Score = 32.7 bits (73), Expect = 2.4, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 90 ARHTASCSVC--CRV--YPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKN 145
A+H A C++C C + + L + FF +VA+G+ M+ +VE C
Sbjct: 3302 AKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSG 3361
Query: 146 YKSRQQHLVDKHKFPTSFEFFKKAHP 171
R V K+KF T F K HP
Sbjct: 3362 EDVRDFAKVLKNKFRTKRYFAK--HP 3385
>sp|Q5GN48|DMD_PIG Dystrophin OS=Sus scrofa GN=DMD PE=1 SV=1
Length = 3674
Score = 32.7 bits (73), Expect = 2.4, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 90 ARHTASCSVC--CRV--YPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKN 145
A+H A C++C C + + L + FF +VA+G+ M+ +VE C
Sbjct: 3296 AKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSG 3355
Query: 146 YKSRQQHLVDKHKFPTSFEFFKKAHP 171
R V K+KF T F K HP
Sbjct: 3356 EDVRDFAKVLKNKFRTKRYFAK--HP 3379
>sp|P11532|DMD_HUMAN Dystrophin OS=Homo sapiens GN=DMD PE=1 SV=3
Length = 3685
Score = 32.7 bits (73), Expect = 2.5, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 90 ARHTASCSVC--CRV--YPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKN 145
A+H A C++C C + + L + FF +VA+G+ M+ +VE C
Sbjct: 3307 AKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSG 3366
Query: 146 YKSRQQHLVDKHKFPTSFEFFKKAHP 171
R V K+KF T F K HP
Sbjct: 3367 EDVRDFAKVLKNKFRTKRYFAK--HP 3390
>sp|P98169|ZXDB_HUMAN Zinc finger X-linked protein ZXDB OS=Homo sapiens GN=ZXDB PE=2 SV=2
Length = 803
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARHTAS----CSV--CCRVYPTSRLLSIHVSE 115
+D RR CP+ GC E + H + H + C V CC + L IH S+
Sbjct: 479 DDDRRFMCPVEGCGKSFTRAEHLKGH-SITHLGTKPFVCPVAGCCARFSARSSLYIH-SK 536
Query: 116 AHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHK 158
H +R C + C F + S + H+V +HK
Sbjct: 537 KHLQDVDTWKSR------CPISSCNKLFTSKHSMKTHMVKRHK 573
>sp|P98168|ZXDA_HUMAN Zinc finger X-linked protein ZXDA OS=Homo sapiens GN=ZXDA PE=1 SV=2
Length = 799
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARHTAS----CSV--CCRVYPTSRLLSIHVSE 115
+D RR CP+ GC E + H + H + C V CC + L IH S+
Sbjct: 475 DDDRRFMCPVEGCGKSFTRAEHLKGH-SITHLGTKPFVCPVAGCCARFSARSSLYIH-SK 532
Query: 116 AHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHK 158
H +R C + C F + S + H+V +HK
Sbjct: 533 KHLQDVDTWKSR------CPISSCNKLFTSKHSMKTHMVKRHK 569
>sp|A2CE44|ZXDAB_MOUSE Zinc finger X-linked protein ZXDA/ZXDB OS=Mus musculus GN=Zxda PE=2
SV=1
Length = 873
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 14/104 (13%)
Query: 62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARHTAS----CSV--CCRVYPTSRLLSIHVSE 115
ED RR CP+ GC E + H + H + C V CC + L IH S+
Sbjct: 548 EDDRRFTCPVEGCGKSFTRAEHLKGH-SITHLGTKPFVCPVEGCCARFSARSSLYIH-SK 605
Query: 116 AHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF 159
H A +R C V C F + S + H+ +H
Sbjct: 606 KHLQDVGAWKSR------CPVPTCNKLFTSKHSMKTHMTKRHNL 643
>sp|Q9CG88|YMDE_LACLA UPF0176 protein YmdE OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=ymdE PE=3 SV=1
Length = 319
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 65 RRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIH 112
R + C CN +M + EE E A++ +CS CRV+P +R + H
Sbjct: 256 RYINCGNPECNRQMLASEENE----AKYLGACSHECRVHPNNRYIKAH 299
>sp|Q6ZN30|BNC2_HUMAN Zinc finger protein basonuclin-2 OS=Homo sapiens GN=BNC2 PE=1 SV=1
Length = 1099
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 96 CSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQH 152
C++C ++Y L +H H M++C V GC + F + +SR +H
Sbjct: 1037 CNICHKMYSNKGTLRVHYKTVH----------LREMHKCKVPGCNMMFSSVRSRNRH 1083
>sp|Q8BMQ3|BNC2_MOUSE Zinc finger protein basonuclin-2 OS=Mus musculus GN=Bnc2 PE=2 SV=3
Length = 1127
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 96 CSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQH 152
C++C ++Y L +H H M++C V GC + F + +SR +H
Sbjct: 1065 CNICHKMYSNKGTLRVHYKTVH----------LREMHKCKVPGCNMMFSSVRSRNRH 1111
>sp|O57311|ZIC3_XENLA Zinc finger protein ZIC 3 OS=Xenopus laevis GN=zic3 PE=2 SV=3
Length = 441
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 13/136 (9%)
Query: 99 CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHL-VDKH 157
C +++ S L IH + G ++C EGC +F N R++H+ V
Sbjct: 306 CGKIFARSENLKIH----------KRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 355
Query: 158 KFPTSFEFFKKA--HPSKKQRQKNQRKQALQKKEASSSMEVEDETIDGLVSAVSKLSTSD 215
P + K+ HPS ++ + ++S E T +VSA S+ + +
Sbjct: 356 DKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESATPPAMVSANSEEPSKN 415
Query: 216 STPSSVSFGRRHTRGL 231
S+ + + H GL
Sbjct: 416 SSATHQTNNNSHNTGL 431
>sp|Q8ST83|PHO_DROME Polycomb protein PHO OS=Drosophila melanogaster GN=pho PE=1 SV=2
Length = 520
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 12/81 (14%)
Query: 65 RRVCCPIVGCNARMRSLEEFEDHYNAR--HTASCSVCCRVYPTSRLLSIHVSEAHDSFFQ 122
+++ CP GCN R H + C+ C + + S L H
Sbjct: 355 KKIACPHKGCNKHFRDSSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRH---------- 404
Query: 123 AKVARGYPMYECLVEGCGLKF 143
V G ++C EGCG +F
Sbjct: 405 QLVHTGEKPFQCTFEGCGKRF 425
>sp|Q29261|VILI_PIG Villin-1 OS=Sus scrofa GN=VIL1 PE=2 SV=2
Length = 827
Score = 31.6 bits (70), Expect = 6.0, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 167 KKAHPSKKQRQKNQRKQALQKKEASSSMEVEDETIDGLVSAV-SKLSTSDSTPSSVS-FG 224
K A+P +K+ NQ ++ K+ S +VE + DG SAV +L + P+ S G
Sbjct: 301 KNANPQEKKEAMNQALNFIKAKQYPPSTQVEVQN-DGAESAVFQQLFQKWTVPNQTSGLG 359
Query: 225 RRHTRGLTFVPRAVHHERKPDSTSMQTK 252
+ HT G A + K D+TSM +
Sbjct: 360 KTHTVGSV----AKVEQVKFDATSMHVQ 383
>sp|Q8WML3|KAT6B_MACFA Histone acetyltransferase KAT6B OS=Macaca fascicularis GN=KAT6B PE=2
SV=1
Length = 1784
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 113 VSEAHDSFFQAKVARGYPMYECLVEGCGLKFK-NYKSRQQHLV-DKHKFPTSFEFFKKAH 170
V E ++F V + E L++ CG+ + S + L D P S E
Sbjct: 1163 VLENEEAFLDLNVQPSHSNPEVLMD-CGVDLTASCNSEPKELAGDPEAVPESDEEPPPGE 1221
Query: 171 PSKKQRQKNQRKQALQKKEAS-SSMEVEDETIDGLVSAVSKLSTSDST 217
++KQ QKN ++ + KE + ++ME++ ET+ + S + S D T
Sbjct: 1222 QAQKQDQKNSKEVDTEFKEGNPATMEIDSETVQAVQSLTQESSEQDDT 1269
>sp|Q62520|ZIC2_MOUSE Zinc finger protein ZIC 2 OS=Mus musculus GN=Zic2 PE=1 SV=2
Length = 530
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 15/123 (12%)
Query: 99 CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHL-VDKH 157
C +V+ S L IH + G ++C EGC +F N R++H+ V
Sbjct: 340 CGKVFARSENLKIH----------KRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTS 389
Query: 158 KFPTSFEFFKKA--HPSKKQRQKNQRKQALQKKEAS--SSMEVEDETIDGLVSAVSKLST 213
P + K+ HPS ++ + + Q E+S +S E T GLVS ++ +
Sbjct: 390 DKPYLCKMCDKSYTHPSSLRKHMKVHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQS 449
Query: 214 SDS 216
S +
Sbjct: 450 SSN 452
>sp|O74808|CLR1_SCHPO Cryptic loci regulator protein 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=clr1 PE=1 SV=1
Length = 1238
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 59/158 (37%), Gaps = 29/158 (18%)
Query: 44 VALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDH-YNARHTASCSV---- 98
V +D E++ + NM+++ C GC A + SLE F H H SCSV
Sbjct: 977 VLIDPFEEKVLKAFNMLSKGYAEYRCQWEGCLANLHSLENFIKHVLLLHHPKSCSVVKCL 1036
Query: 99 ---CCRVYPTSRLLSIHVSEAHDSFFQAKVARGY---PMYECLVEGCGLKFKNYKSRQQH 152
C V P+ E H RG+ C V C F NY+ +H
Sbjct: 1037 WASCDMVLPSEEF------EMH--------LRGHLNNIRLNCEVSNCKKCFSNYEDMFKH 1082
Query: 153 LVDKHKFPTSF---EFFKKAHPSKKQRQKNQRKQALQK 187
L H P F F K + + K+ + R QK
Sbjct: 1083 LQHSH-LPFKFTPESFIKIRNGNVKEEARRTRNAYTQK 1119
>sp|Q6DJQ6|ZIC3_XENTR Zinc finger protein ZIC 3 OS=Xenopus tropicalis GN=zic3 PE=2 SV=1
Length = 441
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 13/136 (9%)
Query: 99 CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHL-VDKH 157
C +++ S L IH + G ++C EGC +F N R++H+ V
Sbjct: 306 CGKIFARSENLKIH----------KRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 355
Query: 158 KFPTSFEFFKKA--HPSKKQRQKNQRKQALQKKEASSSMEVEDETIDGLVSAVSKLSTSD 215
P + K+ HPS ++ + ++S E T +VSA S+ + +
Sbjct: 356 DKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESATPPAMVSANSEEPSKN 415
Query: 216 STPSSVSFGRRHTRGL 231
S+ + + H GL
Sbjct: 416 SSATHQTNNSSHNTGL 431
>sp|O95409|ZIC2_HUMAN Zinc finger protein ZIC 2 OS=Homo sapiens GN=ZIC2 PE=1 SV=2
Length = 532
Score = 31.2 bits (69), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 15/123 (12%)
Query: 99 CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHL-VDKH 157
C +V+ S L IH + G ++C EGC +F N R++H+ V
Sbjct: 340 CGKVFARSENLKIH----------KRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTS 389
Query: 158 KFPTSFEFFKKA--HPSKKQRQKNQRKQALQKKEAS--SSMEVEDETIDGLVSAVSKLST 213
P + K+ HPS ++ + + Q E+S +S E T GLVS ++ +
Sbjct: 390 DKPYLCKMCDKSYTHPSSLRKHMKVHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQS 449
Query: 214 SDS 216
S +
Sbjct: 450 SSN 452
>sp|Q8VDL9|GLIS2_MOUSE Zinc finger protein GLIS2 OS=Mus musculus GN=Glis2 PE=1 SV=1
Length = 521
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 56/154 (36%), Gaps = 36/154 (23%)
Query: 21 RCFRPDSPF-------FASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVG 73
+C P+ P +A N ELL Q +D D + E R CC G
Sbjct: 156 KCLSPELPLAKQLVCRWAKCNQLFELL--QDLVDHVNDHHVK-----PEQDARYCCHWEG 208
Query: 74 C-------NARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVA 126
C NAR + L H N + C C + + L IH + +H
Sbjct: 209 CARHGRGFNARYKMLIHIRTHTNEK-PHRCPTCNKSFSRLENLKIH-NRSHT-------- 258
Query: 127 RGYPMYECLVEGCGLKFKN----YKSRQQHLVDK 156
G Y C EGC ++ N +K + H VDK
Sbjct: 259 -GEKPYVCPYEGCNKRYSNSSDRFKHTRTHYVDK 291
>sp|P11533|DMD_CHICK Dystrophin OS=Gallus gallus GN=DMD PE=2 SV=1
Length = 3660
Score = 31.2 bits (69), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 90 ARHTASCSVC--CRV----YPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKF 143
A+H A C++C C + Y + + + + ++ FF +VA+G+ M+ +VE C
Sbjct: 3304 AKHQAKCNICKECPIIGFRYRSLKHFNYDICQS--CFFSGRVAKGHKMHYPMVEYCTPTT 3361
Query: 144 KNYKSRQQHLVDKHKFPTSFEFFKKAHP 171
R V K+KF T F K HP
Sbjct: 3362 SGEDVRDFAKVLKNKFRTKRYFAK--HP 3387
>sp|Q91689|ZIC2A_XENLA Zinc finger protein ZIC 2-A OS=Xenopus laevis GN=zic2-a PE=2 SV=2
Length = 503
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 99 CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHL-VDKH 157
C +V+ S L IH + G ++C EGC +F N R++H+ V
Sbjct: 361 CGKVFARSENLKIH----------KRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTS 410
Query: 158 KFPTSFEFFKKA--HPSKKQRQKNQRKQALQKKEAS--SSMEVEDETIDGLVSAVSK 210
P + K+ HPS ++ + + Q E+S +S E T GLVS S+
Sbjct: 411 DKPYLCKMCDKSYTHPSSLRKHMKVHESSPQGSESSPAASSGYESSTPPGLVSPNSE 467
>sp|B1WBS3|ZBT42_RAT Zinc finger and BTB domain-containing protein 42 OS=Rattus
norvegicus GN=Zbtb42 PE=2 SV=1
Length = 420
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 85 EDHYNARHTASCSVCCRVYPTSRLLSIHVS 114
ED RH C +CC+++P++ L H+S
Sbjct: 283 EDLGPGRHLCICPLCCKLFPSTHALQPHLS 312
>sp|P22227|ZFP42_MOUSE Zinc finger protein 42 OS=Mus musculus GN=Zfp42 PE=1 SV=1
Length = 288
Score = 30.8 bits (68), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 16/79 (20%)
Query: 69 CPIVGCNARMRSLEEFEDHYNA----RHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAK 124
CP GC ++R H RH C+ C + + S L H
Sbjct: 172 CPQAGCKKKLRGKTALRKHMLVHGPRRHV--CAECGKAFTESSKLKRHFL---------- 219
Query: 125 VARGYPMYECLVEGCGLKF 143
V G Y+C EGCG +F
Sbjct: 220 VHTGEKPYQCTFEGCGKRF 238
>sp|P11531|DMD_MOUSE Dystrophin OS=Mus musculus GN=Dmd PE=1 SV=3
Length = 3678
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 90 ARHTASCSVC--CRV----YPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKF 143
A+H A C++C C + Y + + + + ++ FF +VA+G+ M+ +VE C
Sbjct: 3300 AKHQAKCNICKECPIIGFRYRSLKHFNYDICQS--CFFSGRVAKGHKMHYPMVEYCTPTT 3357
Query: 144 KNYKSRQQHLVDKHKFPTSFEFFKKAHP 171
R V K+KF T F K HP
Sbjct: 3358 SGEDVRDFAKVLKNKFRTKRYFAK--HP 3383
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.130 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,401,199
Number of Sequences: 539616
Number of extensions: 3425036
Number of successful extensions: 13693
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 13451
Number of HSP's gapped (non-prelim): 329
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)