Query 025437
Match_columns 253
No_of_seqs 128 out of 441
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 10:19:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025437.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025437hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 1.8E-98 6E-103 663.2 22.0 237 4-240 3-241 (248)
2 3iqu_A 14-3-3 protein sigma; s 100.0 5.7E-98 2E-102 656.3 20.4 233 1-233 4-236 (236)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 1E-96 3E-101 654.6 22.5 232 4-235 30-261 (261)
4 1o9d_A 14-3-3-like protein C; 100.0 3.9E-96 1E-100 653.1 22.0 244 2-245 5-250 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 8.2E-95 2.8E-99 637.1 22.5 231 4-234 4-234 (234)
6 2npm_A 14-3-3 domain containin 100.0 9.3E-94 3.2E-98 637.4 22.2 232 3-235 26-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 3.8E-91 1.3E-95 620.4 14.1 228 3-238 27-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 2.4E-82 8.1E-87 553.1 18.7 215 4-230 2-226 (227)
9 3nf1_A KLC 1, kinesin light ch 95.2 1.1 3.8E-05 36.9 19.0 185 6-205 28-227 (311)
10 3edt_B KLC 2, kinesin light ch 95.1 1 3.5E-05 36.3 15.3 59 146-205 143-201 (283)
11 3vtx_A MAMA; tetratricopeptide 95.1 0.83 2.8E-05 35.2 16.3 161 7-201 7-169 (184)
12 2qfc_A PLCR protein; TPR, HTH, 93.4 2.7 9.3E-05 35.4 14.6 73 119-203 154-226 (293)
13 3u3w_A Transcriptional activat 93.3 3.3 0.00011 34.9 16.5 57 146-204 171-227 (293)
14 3hym_B Cell division cycle pro 93.2 2.6 8.8E-05 34.9 13.9 46 146-200 252-297 (330)
15 4g1t_A Interferon-induced prot 92.7 2.5 8.6E-05 37.5 14.0 49 147-200 351-399 (472)
16 3qwp_A SET and MYND domain-con 92.6 0.22 7.4E-06 46.4 6.9 64 147-214 346-409 (429)
17 3fp2_A TPR repeat-containing p 92.6 5.1 0.00017 35.9 16.0 49 146-203 444-492 (537)
18 3n71_A Histone lysine methyltr 92.3 0.24 8.4E-06 47.0 6.9 99 92-204 326-424 (490)
19 3u4t_A TPR repeat-containing p 92.3 0.94 3.2E-05 36.9 9.7 53 148-201 197-249 (272)
20 3qww_A SET and MYND domain-con 91.6 0.33 1.1E-05 45.3 6.9 106 92-214 315-420 (433)
21 3qww_A SET and MYND domain-con 91.5 0.85 2.9E-05 42.5 9.6 58 147-205 315-372 (433)
22 4abn_A Tetratricopeptide repea 91.5 8.3 0.00028 35.3 16.4 172 7-201 104-286 (474)
23 3ro2_A PINS homolog, G-protein 91.1 5.5 0.00019 32.5 14.5 56 146-204 199-254 (338)
24 4i17_A Hypothetical protein; T 90.9 3.3 0.00011 33.0 11.6 61 5-66 7-67 (228)
25 1fch_A Peroxisomal targeting s 90.9 4.8 0.00017 34.0 13.2 57 7-65 100-156 (368)
26 3n71_A Histone lysine methyltr 90.9 1 3.5E-05 42.6 9.6 58 147-205 326-383 (490)
27 4a1s_A PINS, partner of inscut 90.7 7.6 0.00026 33.5 19.8 189 6-204 49-254 (411)
28 3edt_B KLC 2, kinesin light ch 90.0 0.49 1.7E-05 38.3 5.7 56 147-203 102-157 (283)
29 3ieg_A DNAJ homolog subfamily 89.9 7.6 0.00026 32.2 16.2 47 146-201 288-334 (359)
30 3ulq_A Response regulator aspa 89.5 1.8 6.2E-05 37.8 9.5 73 118-203 101-173 (383)
31 3ro2_A PINS homolog, G-protein 89.5 7.6 0.00026 31.6 19.8 189 6-204 6-214 (338)
32 2gw1_A Mitochondrial precursor 89.3 9.1 0.00031 33.8 14.1 56 146-202 205-266 (514)
33 4eqf_A PEX5-related protein; a 89.1 9.7 0.00033 32.4 17.0 59 6-66 66-124 (365)
34 3qwp_A SET and MYND domain-con 88.6 0.47 1.6E-05 44.1 5.1 57 147-204 304-360 (429)
35 3ro3_A PINS homolog, G-protein 88.4 5.4 0.00019 28.6 12.0 55 146-203 105-159 (164)
36 4gcn_A Protein STI-1; structur 88.1 1.4 4.8E-05 32.7 6.7 48 146-202 24-71 (127)
37 2y4t_A DNAJ homolog subfamily 87.9 11 0.00038 32.8 13.5 47 146-201 311-357 (450)
38 2q7f_A YRRB protein; TPR, prot 87.7 8.6 0.00029 30.1 15.3 58 7-66 59-116 (243)
39 3u4t_A TPR repeat-containing p 87.7 2.5 8.7E-05 34.2 8.6 61 3-65 1-61 (272)
40 2xpi_A Anaphase-promoting comp 87.6 16 0.00055 33.2 18.9 55 146-202 491-545 (597)
41 3qky_A Outer membrane assembly 87.5 10 0.00035 30.8 14.5 64 5-69 15-80 (261)
42 2gw1_A Mitochondrial precursor 87.0 16 0.00053 32.3 14.7 172 7-202 306-478 (514)
43 2y4t_A DNAJ homolog subfamily 86.6 15 0.00053 31.9 15.5 168 9-201 147-323 (450)
44 3sf4_A G-protein-signaling mod 86.5 14 0.00048 31.3 17.9 54 147-203 204-257 (406)
45 3q15_A PSP28, response regulat 86.4 2.1 7.3E-05 37.4 7.9 75 117-204 98-172 (378)
46 3ulq_A Response regulator aspa 86.4 15 0.00053 31.7 17.6 176 10-204 108-295 (383)
47 2xpi_A Anaphase-promoting comp 86.3 19 0.00066 32.7 17.3 48 146-202 532-579 (597)
48 4a1s_A PINS, partner of inscut 86.2 15 0.00053 31.5 16.0 178 8-204 89-294 (411)
49 2ho1_A Type 4 fimbrial biogene 85.3 12 0.00043 29.6 13.9 165 7-201 39-203 (252)
50 4b4t_Q 26S proteasome regulato 85.0 19 0.00063 31.3 16.4 179 8-204 58-247 (434)
51 4eqf_A PEX5-related protein; a 84.7 17 0.00059 30.7 15.6 58 7-66 101-158 (365)
52 3nf1_A KLC 1, kinesin light ch 84.7 15 0.0005 29.9 15.6 180 8-202 72-307 (311)
53 3hym_B Cell division cycle pro 84.7 15 0.00052 30.1 14.9 56 146-202 209-265 (330)
54 1fch_A Peroxisomal targeting s 84.4 17 0.00059 30.5 17.2 58 6-65 65-122 (368)
55 2pl2_A Hypothetical conserved 84.2 14 0.00049 29.4 12.3 59 5-65 5-63 (217)
56 3sf4_A G-protein-signaling mod 84.2 18 0.00062 30.6 20.4 189 7-204 11-218 (406)
57 4gyw_A UDP-N-acetylglucosamine 83.7 35 0.0012 33.6 16.3 167 6-207 10-179 (723)
58 3ieg_A DNAJ homolog subfamily 83.5 18 0.0006 29.9 16.9 168 9-202 124-301 (359)
59 2vq2_A PILW, putative fimbrial 82.5 15 0.0005 28.2 15.1 166 7-202 10-176 (225)
60 3rkv_A Putative peptidylprolyl 82.2 1.8 6.1E-05 32.9 4.9 55 146-201 27-91 (162)
61 2pl2_A Hypothetical conserved 81.6 18 0.00063 28.8 17.8 140 7-202 41-180 (217)
62 1xnf_A Lipoprotein NLPI; TPR, 81.4 19 0.00064 28.7 12.9 49 148-201 195-243 (275)
63 4gco_A Protein STI-1; structur 80.9 4.7 0.00016 29.8 6.7 46 147-201 30-75 (126)
64 1elr_A TPR2A-domain of HOP; HO 80.4 11 0.00037 26.1 8.3 53 147-201 55-107 (131)
65 3ro3_A PINS homolog, G-protein 80.3 5.2 0.00018 28.7 6.7 56 146-204 25-80 (164)
66 3fp2_A TPR repeat-containing p 80.0 32 0.0011 30.6 15.9 54 148-201 213-271 (537)
67 3uq3_A Heat shock protein STI1 79.5 20 0.0007 28.0 15.3 31 7-37 81-111 (258)
68 3cv0_A Peroxisome targeting si 78.9 25 0.00085 28.7 15.3 44 6-50 22-65 (327)
69 3u3w_A Transcriptional activat 78.6 6.4 0.00022 33.0 7.6 53 147-203 132-185 (293)
70 3uq3_A Heat shock protein STI1 77.9 23 0.00079 27.7 17.1 56 6-64 6-61 (258)
71 4gcn_A Protein STI-1; structur 77.4 6.9 0.00024 28.7 6.7 53 147-201 59-111 (127)
72 3q15_A PSP28, response regulat 77.3 34 0.0012 29.4 17.4 174 9-202 105-290 (378)
73 2q7f_A YRRB protein; TPR, prot 77.2 24 0.00081 27.5 10.9 59 6-66 24-82 (243)
74 4g1t_A Interferon-induced prot 76.8 5.2 0.00018 35.4 6.8 54 147-201 68-122 (472)
75 2l6j_A TPR repeat-containing p 75.2 9.3 0.00032 26.0 6.6 46 147-201 21-66 (111)
76 2e2e_A Formate-dependent nitri 74.7 25 0.00084 26.4 11.4 46 147-201 98-143 (177)
77 3gw4_A Uncharacterized protein 74.2 10 0.00034 29.0 7.1 55 147-203 83-137 (203)
78 1na3_A Designed protein CTPR2; 73.4 13 0.00044 24.3 6.7 47 147-202 26-72 (91)
79 2qfc_A PLCR protein; TPR, HTH, 73.3 13 0.00045 31.0 8.2 188 7-216 77-276 (293)
80 3k9i_A BH0479 protein; putativ 73.3 11 0.00038 26.7 6.7 47 147-202 44-90 (117)
81 1hz4_A MALT regulatory protein 72.0 11 0.00039 32.2 7.6 55 147-202 110-164 (373)
82 3lf9_A 4E10_D0_1IS1A_001_C (T1 71.8 19 0.00065 27.8 7.8 86 19-109 11-103 (121)
83 2ifu_A Gamma-SNAP; membrane fu 71.2 45 0.0015 28.0 11.8 52 146-200 171-222 (307)
84 2kck_A TPR repeat; tetratricop 71.1 15 0.0005 24.6 6.7 46 147-201 23-68 (112)
85 2xev_A YBGF; tetratricopeptide 71.0 18 0.00061 25.3 7.4 71 147-229 56-126 (129)
86 2kc7_A BFR218_protein; tetratr 68.9 18 0.00063 24.3 6.9 48 147-202 17-64 (99)
87 2dba_A Smooth muscle cell asso 68.7 9.9 0.00034 27.2 5.6 50 147-202 45-94 (148)
88 2hr2_A Hypothetical protein; a 67.5 19 0.00066 28.8 7.5 55 146-202 27-86 (159)
89 3cv0_A Peroxisome targeting si 67.2 49 0.0017 26.8 17.3 31 7-37 57-87 (327)
90 2ho1_A Type 4 fimbrial biogene 66.9 44 0.0015 26.2 15.9 60 7-68 73-132 (252)
91 3upv_A Heat shock protein STI1 66.5 19 0.00064 25.5 6.7 46 147-201 21-66 (126)
92 2fbn_A 70 kDa peptidylprolyl i 65.7 44 0.0015 25.7 11.8 31 7-37 40-70 (198)
93 4gco_A Protein STI-1; structur 65.6 19 0.00065 26.3 6.7 46 147-201 64-109 (126)
94 2xcb_A PCRH, regulatory protei 65.5 37 0.0013 24.8 8.4 48 147-203 69-116 (142)
95 2ifu_A Gamma-SNAP; membrane fu 64.4 63 0.0021 27.1 13.8 54 146-203 131-185 (307)
96 2h6f_A Protein farnesyltransfe 64.0 80 0.0027 28.1 13.0 58 6-65 98-156 (382)
97 2lni_A Stress-induced-phosphop 63.6 24 0.00081 24.4 6.7 47 147-202 67-113 (133)
98 3bee_A Putative YFRE protein; 63.4 11 0.00037 26.9 4.7 31 7-37 45-75 (93)
99 2kat_A Uncharacterized protein 63.3 34 0.0012 23.7 12.1 58 7-66 21-78 (115)
100 1qqe_A Vesicular transport pro 62.7 66 0.0022 26.7 13.3 52 146-201 134-186 (292)
101 1elr_A TPR2A-domain of HOP; HO 62.6 26 0.00089 24.0 6.7 49 146-203 20-68 (131)
102 3sz7_A HSC70 cochaperone (SGT) 62.5 22 0.00074 26.6 6.7 15 186-200 92-106 (164)
103 3upv_A Heat shock protein STI1 62.3 25 0.00086 24.8 6.7 48 147-203 55-102 (126)
104 3vtx_A MAMA; tetratricopeptide 62.0 22 0.00076 26.8 6.7 47 146-201 21-67 (184)
105 3ma5_A Tetratricopeptide repea 61.9 36 0.0012 23.4 11.0 57 7-65 9-65 (100)
106 1w3b_A UDP-N-acetylglucosamine 61.2 76 0.0026 26.9 15.0 31 8-38 70-100 (388)
107 3as5_A MAMA; tetratricopeptide 60.9 45 0.0015 24.2 14.8 57 8-66 11-67 (186)
108 2kat_A Uncharacterized protein 60.8 33 0.0011 23.8 7.1 49 146-203 35-83 (115)
109 3sz7_A HSC70 cochaperone (SGT) 60.0 50 0.0017 24.5 11.2 29 8-36 14-42 (164)
110 2vgx_A Chaperone SYCD; alterna 59.2 25 0.00086 26.4 6.5 47 147-202 72-118 (148)
111 3ma5_A Tetratricopeptide repea 59.0 41 0.0014 23.1 9.5 72 146-232 23-94 (100)
112 1elw_A TPR1-domain of HOP; HOP 58.9 28 0.00094 23.3 6.2 46 147-201 55-100 (118)
113 1qqe_A Vesicular transport pro 58.3 26 0.00089 29.3 7.1 53 147-202 54-106 (292)
114 2vyi_A SGTA protein; chaperone 58.2 35 0.0012 23.2 6.7 46 147-201 29-74 (131)
115 1elw_A TPR1-domain of HOP; HOP 57.7 37 0.0013 22.6 6.7 47 147-202 21-67 (118)
116 2vyi_A SGTA protein; chaperone 57.5 36 0.0012 23.1 6.7 47 147-202 63-109 (131)
117 2h6f_A Protein farnesyltransfe 56.6 1.1E+02 0.0037 27.2 12.6 47 8-55 203-249 (382)
118 3k9i_A BH0479 protein; putativ 56.0 49 0.0017 23.1 8.6 58 7-66 29-86 (117)
119 1a17_A Serine/threonine protei 55.9 35 0.0012 24.7 6.7 47 147-202 64-110 (166)
120 4ga2_A E3 SUMO-protein ligase 55.8 31 0.0011 25.7 6.5 30 8-37 34-63 (150)
121 3qky_A Outer membrane assembly 55.4 79 0.0027 25.3 17.3 50 146-201 113-176 (261)
122 3gyz_A Chaperone protein IPGC; 55.3 29 0.00098 26.7 6.3 48 146-202 86-133 (151)
123 4ga2_A E3 SUMO-protein ligase 55.1 35 0.0012 25.4 6.7 46 147-201 48-93 (150)
124 2dba_A Smooth muscle cell asso 54.8 39 0.0013 23.8 6.7 46 147-201 82-127 (148)
125 1ihg_A Cyclophilin 40; ppiase 54.1 11 0.00037 33.6 4.1 54 147-201 240-301 (370)
126 3caz_A BAR protein; thermo-aci 54.0 98 0.0033 26.0 9.6 108 11-162 100-210 (294)
127 1w3b_A UDP-N-acetylglucosamine 53.8 1E+02 0.0035 26.1 14.0 43 7-50 35-77 (388)
128 1na0_A Designed protein CTPR3; 53.7 47 0.0016 22.3 6.7 46 147-201 26-71 (125)
129 1lyp_A CAP18; lipopolysacchari 53.6 28 0.00096 20.0 4.3 26 81-106 4-29 (32)
130 1a17_A Serine/threonine protei 52.4 42 0.0014 24.2 6.7 48 146-202 29-76 (166)
131 1na0_A Designed protein CTPR3; 52.4 50 0.0017 22.1 6.7 47 147-202 60-106 (125)
132 2vsy_A XCC0866; transferase, g 50.6 1.5E+02 0.0051 27.1 13.0 31 7-37 25-55 (568)
133 3urz_A Uncharacterized protein 50.4 42 0.0014 26.4 6.7 32 5-36 4-35 (208)
134 1hh8_A P67PHOX, NCF-2, neutrop 50.4 43 0.0015 25.6 6.7 46 147-201 54-99 (213)
135 2xcb_A PCRH, regulatory protei 50.2 70 0.0024 23.1 10.8 29 8-36 21-49 (142)
136 4gfq_A Ribosome-recycling fact 50.2 39 0.0013 28.5 6.6 73 36-109 127-199 (209)
137 4abn_A Tetratricopeptide repea 49.5 1.5E+02 0.0051 26.7 11.8 163 16-201 79-249 (474)
138 2hr2_A Hypothetical protein; a 48.4 32 0.0011 27.5 5.6 78 147-230 74-154 (159)
139 1p5q_A FKBP52, FK506-binding p 48.4 15 0.0005 32.0 3.9 54 147-201 164-224 (336)
140 2crb_A Nuclear receptor bindin 48.0 81 0.0028 23.3 8.7 37 10-57 17-56 (97)
141 1kt0_A FKBP51, 51 kDa FK506-bi 47.7 28 0.00095 31.7 5.9 53 147-201 285-345 (457)
142 2ooe_A Cleavage stimulation fa 46.7 24 0.00081 32.3 5.2 53 146-207 62-114 (530)
143 3as5_A MAMA; tetratricopeptide 46.0 62 0.0021 23.4 6.7 47 147-202 93-139 (186)
144 2v5f_A Prolyl 4-hydroxylase su 46.0 74 0.0025 22.2 7.6 53 147-201 22-74 (104)
145 1wao_1 Serine/threonine protei 45.6 41 0.0014 30.8 6.7 15 186-200 87-101 (477)
146 2ond_A Cleavage stimulation fa 45.5 32 0.0011 28.9 5.5 46 146-199 115-160 (308)
147 2ond_A Cleavage stimulation fa 45.5 1.3E+02 0.0044 24.9 14.1 30 8-37 102-131 (308)
148 3gyz_A Chaperone protein IPGC; 44.7 1E+02 0.0034 23.4 9.8 45 6-51 37-81 (151)
149 2kck_A TPR repeat; tetratricop 44.1 65 0.0022 21.1 8.2 28 9-36 10-37 (112)
150 1dd5_A Ribosome recycling fact 43.7 59 0.002 26.8 6.7 73 36-109 103-175 (185)
151 2yhc_A BAMD, UPF0169 lipoprote 43.2 1.2E+02 0.0041 23.8 18.3 62 6-68 5-68 (225)
152 2c2l_A CHIP, carboxy terminus 43.0 39 0.0013 28.2 5.7 48 152-203 53-102 (281)
153 1xnf_A Lipoprotein NLPI; TPR, 42.3 65 0.0022 25.4 6.7 16 186-201 124-139 (275)
154 1zu2_A Mitochondrial import re 42.1 33 0.0011 27.4 4.7 94 127-234 43-143 (158)
155 3urz_A Uncharacterized protein 42.0 1.2E+02 0.0041 23.6 13.1 27 11-37 60-86 (208)
156 1ise_A Ribosome recycling fact 41.6 62 0.0021 26.6 6.5 72 36-108 103-174 (185)
157 1ge9_A Ribosome recycling fact 41.1 95 0.0032 25.5 7.5 71 35-109 104-174 (184)
158 2wh5_A Acyl-COA-binding domain 41.0 42 0.0014 25.1 4.9 36 19-54 10-46 (106)
159 2g0u_A Type III secretion syst 40.5 18 0.00063 26.6 2.7 60 116-182 4-67 (92)
160 1eh1_A Ribosome recycling fact 40.1 62 0.0021 26.6 6.3 73 36-109 104-176 (185)
161 2v5f_A Prolyl 4-hydroxylase su 39.7 94 0.0032 21.7 11.0 65 1-66 1-71 (104)
162 1is1_A Ribosome recycling fact 39.7 66 0.0023 26.5 6.3 68 36-108 103-174 (185)
163 2fo7_A Synthetic consensus TPR 39.3 84 0.0029 21.0 6.2 46 147-201 52-97 (136)
164 2r5s_A Uncharacterized protein 38.8 73 0.0025 24.0 6.3 32 7-38 110-141 (176)
165 1wqg_A Ribosome recycling fact 38.5 71 0.0024 26.3 6.3 68 36-108 103-174 (185)
166 1na3_A Designed protein CTPR2; 38.4 76 0.0026 20.2 6.6 58 7-66 11-68 (91)
167 1hxi_A PEX5, peroxisome target 38.2 1.1E+02 0.0036 21.8 8.3 58 6-65 18-75 (121)
168 1hh8_A P67PHOX, NCF-2, neutrop 38.2 60 0.0021 24.7 5.8 55 146-201 87-149 (213)
169 2kc7_A BFR218_protein; tetratr 37.9 52 0.0018 21.8 4.8 29 9-37 4-32 (99)
170 2vq2_A PILW, putative fimbrial 37.7 1.3E+02 0.0043 22.6 15.7 164 7-201 44-210 (225)
171 2yhc_A BAMD, UPF0169 lipoprote 37.7 1E+02 0.0035 24.2 7.2 49 147-201 21-69 (225)
172 3rkv_A Putative peptidylprolyl 36.9 1.2E+02 0.0042 22.1 10.3 70 147-233 80-149 (162)
173 2l6j_A TPR repeat-containing p 36.4 50 0.0017 22.1 4.5 31 6-36 5-35 (111)
174 3gw4_A Uncharacterized protein 36.4 1.3E+02 0.0045 22.3 17.5 56 146-204 123-178 (203)
175 4i17_A Hypothetical protein; T 35.3 77 0.0026 24.6 6.1 46 147-201 59-104 (228)
176 3eab_A Spastin; spastin, MIT, 34.9 1.3E+02 0.0044 21.8 7.6 68 147-231 7-80 (89)
177 2e2e_A Formate-dependent nitri 34.2 82 0.0028 23.4 5.8 48 147-202 61-110 (177)
178 2fbn_A 70 kDa peptidylprolyl i 32.1 1.2E+02 0.0039 23.2 6.5 58 7-66 90-147 (198)
179 4gyw_A UDP-N-acetylglucosamine 31.5 85 0.0029 30.8 6.7 47 146-201 93-139 (723)
180 3onj_A T-snare VTI1; helix, HA 31.2 1.5E+02 0.0051 21.4 9.3 80 21-100 10-91 (97)
181 2xev_A YBGF; tetratricopeptide 30.9 1.3E+02 0.0044 20.6 9.9 57 8-65 5-63 (129)
182 3ub0_A Non-structural protein 30.9 36 0.0012 28.3 3.2 37 146-202 19-55 (199)
183 1wao_1 Serine/threonine protei 29.6 84 0.0029 28.7 6.0 12 187-198 54-65 (477)
184 2if4_A ATFKBP42; FKBP-like, al 29.6 43 0.0015 29.0 3.8 49 147-201 196-258 (338)
185 4h7y_A Dual specificity protei 28.2 62 0.0021 26.2 4.2 50 144-199 33-86 (161)
186 2wb7_A PT26-6P; extra chromoso 27.9 1.4E+02 0.0046 28.6 7.0 54 133-188 435-489 (526)
187 3qou_A Protein YBBN; thioredox 27.6 1.6E+02 0.0054 24.3 7.1 32 7-38 221-252 (287)
188 3u64_A Protein TP_0956; tetrat 26.8 75 0.0026 28.2 4.8 62 127-201 206-268 (301)
189 3iyk_A VP5; icosahedral virus; 26.0 3.3E+02 0.011 25.9 9.3 188 19-227 121-337 (526)
190 1xi4_A Clathrin heavy chain; a 25.7 5.9E+02 0.02 27.8 12.1 24 177-200 1284-1307(1630)
191 2c2l_A CHIP, carboxy terminus 24.2 96 0.0033 25.7 5.0 31 6-36 5-35 (281)
192 2pzi_A Probable serine/threoni 24.2 4.6E+02 0.016 24.8 12.1 125 8-199 436-560 (681)
193 2ooe_A Cleavage stimulation fa 23.5 1.7E+02 0.0059 26.3 6.9 20 182-201 400-419 (530)
194 1ya0_A SMG-7 transcript varian 22.8 27 0.00093 33.1 1.3 25 126-160 158-182 (497)
195 3mkr_A Coatomer subunit epsilo 22.8 1.9E+02 0.0065 24.0 6.7 46 147-201 183-228 (291)
196 2efl_A Formin-binding protein 22.8 1.5E+02 0.0052 24.8 6.1 16 146-161 188-203 (305)
197 2lbb_A Acyl COA binding protei 22.4 1.2E+02 0.0041 22.2 4.5 35 18-54 11-45 (96)
198 3cjl_A Domain of unknown funct 22.2 50 0.0017 24.0 2.3 33 18-51 24-56 (88)
199 2x3v_A Syndapin I, protein kin 21.9 1.7E+02 0.0058 25.3 6.3 77 20-100 35-116 (337)
200 1hbk_A ACBP, acyl-COA binding 21.7 2.2E+02 0.0075 20.2 6.0 35 19-54 4-38 (89)
201 4b4t_Q 26S proteasome regulato 21.7 3.7E+02 0.013 22.7 20.2 54 147-203 152-205 (434)
202 1m1e_B ICAT; cell adhesion, cy 21.5 89 0.003 22.4 3.5 25 25-49 20-44 (81)
203 2vsy_A XCC0866; transferase, g 21.3 1.9E+02 0.0063 26.4 6.7 20 18-37 2-21 (568)
204 3flv_A Acyl-COA-binding domain 20.6 2.8E+02 0.0097 21.0 7.5 36 19-54 26-62 (119)
205 3q49_B STIP1 homology and U bo 20.1 2.2E+02 0.0075 19.5 11.5 44 6-50 10-53 (137)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=1.8e-98 Score=663.24 Aligned_cols=237 Identities=62% Similarity=0.993 Sum_probs=223.9
Q ss_pred cHhhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHH
Q 025437 4 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRI 83 (253)
Q Consensus 4 ~re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i 83 (253)
+|++++|+||||+||||||||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 3 ~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~~~i 82 (248)
T 3uzd_A 3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMV 82 (248)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-HHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999877888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC--chhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHh
Q 025437 84 KEYRQRVEDELAKICNDILSVIDEHLIPSSTSG--ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAA 161 (253)
Q Consensus 84 ~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 161 (253)
++||++|++||..+|++||++||++|||.++++ |+||||+|||||||||+|||..|++|+++++.|+++|++|+++|+
T Consensus 83 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~ 162 (248)
T 3uzd_A 83 RAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISK 162 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHHhhHhhhccCCCCCC
Q 025437 162 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEG 240 (253)
Q Consensus 162 ~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqLLrdNl~~W~~e~~~~~ 240 (253)
.+|||||||||||+||||||||||+|+|++||.+|++|||+||++||+|++++|+|||+||||||||||+||++.++++
T Consensus 163 ~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~~~~ 241 (248)
T 3uzd_A 163 EHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDD 241 (248)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-------
T ss_pred hhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCcccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999988766
No 2
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=5.7e-98 Score=656.31 Aligned_cols=233 Identities=58% Similarity=0.911 Sum_probs=229.0
Q ss_pred CcccHhhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHH
Q 025437 1 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNV 80 (253)
Q Consensus 1 m~~~re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~ 80 (253)
|+|+|++++|+||||+||||||||+++||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.++
T Consensus 4 ~~~~re~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~ 83 (236)
T 3iqu_A 4 GSMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKG 83 (236)
T ss_dssp TTSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred ccccHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHH
Q 025437 81 KRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAA 160 (253)
Q Consensus 81 ~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 160 (253)
+.+++||++|++||..+|++||++||++|||+++++|+||||+|||||||||+|||..|++|+++++.|+++|++|+++|
T Consensus 84 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA 163 (236)
T 3iqu_A 84 PEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDIS 163 (236)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHHhhHhhhc
Q 025437 161 ASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 233 (253)
Q Consensus 161 ~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqLLrdNl~~W~ 233 (253)
+.+|||||||||||+||||||||||+|+|++||.+||+|||+||+++|+|+|++|+|||+||||||||||+||
T Consensus 164 ~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 164 KKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 9899999999999999999999999999999999999999999999999999999999999999999999997
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=1e-96 Score=654.61 Aligned_cols=232 Identities=78% Similarity=1.167 Sum_probs=227.7
Q ss_pred cHhhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHH
Q 025437 4 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRI 83 (253)
Q Consensus 4 ~re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i 83 (253)
+|++++|+|||||||||||||+++||++++.+++||.||||||||||||+||+||+|||+|++++|+++.+|++.+++.+
T Consensus 30 ~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~~~~~i 109 (261)
T 3ubw_A 30 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMI 109 (261)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhcc
Q 025437 84 KEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASE 163 (253)
Q Consensus 84 ~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~ 163 (253)
++||++|++||..+|++||++||++|||+++++|+||||+|||||||||+|||..|++|+++++.|+++|++|+++|+.+
T Consensus 110 ~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~ 189 (261)
T 3ubw_A 110 REYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTE 189 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred CCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHHhhHhhhccC
Q 025437 164 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 235 (253)
Q Consensus 164 L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqLLrdNl~~W~~e 235 (253)
|||||||||||+||||||||||+|+|++||.+||+|||+||++||+|+|++|+|||+||||||||||+||++
T Consensus 190 L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 190 LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999974
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=3.9e-96 Score=653.13 Aligned_cols=244 Identities=71% Similarity=1.104 Sum_probs=224.4
Q ss_pred cccHhhHHHHHHHHHHhcCHHHHHHHHHHHHhcC--CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhH
Q 025437 2 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKLD--VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQN 79 (253)
Q Consensus 2 ~~~re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~--~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~ 79 (253)
+++|++++|+|||++|||||+||+.+||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.+
T Consensus 5 ~~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~~ 84 (260)
T 1o9d_A 5 PTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEH 84 (260)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHHH
Confidence 4789999999999999999999999999999998 99999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHH
Q 025437 80 VKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAA 159 (253)
Q Consensus 80 ~~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 159 (253)
++.+++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 85 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 164 (260)
T 1o9d_A 85 VNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI 164 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHHhhHhhhccCCCCC
Q 025437 160 AASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEE 239 (253)
Q Consensus 160 a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqLLrdNl~~W~~e~~~~ 239 (253)
|+.+|||||||||||+||||||||||+|+|++||.||++|||+||+++|+|+|++|+|+|+||||||||||+||++.+++
T Consensus 165 A~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~~~~ 244 (260)
T 1o9d_A 165 ATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 244 (260)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC-----
T ss_pred HHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhccCcc
Confidence 98889999999999999999999999999999999999999999999999999999999999999999999999987777
Q ss_pred CCCCCC
Q 025437 240 GGEQSK 245 (253)
Q Consensus 240 ~~~~~~ 245 (253)
+++..+
T Consensus 245 ~~~~~~ 250 (260)
T 1o9d_A 245 GADEIK 250 (260)
T ss_dssp ------
T ss_pred cccccc
Confidence 665433
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=8.2e-95 Score=637.13 Aligned_cols=231 Identities=78% Similarity=1.165 Sum_probs=227.2
Q ss_pred cHhhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHH
Q 025437 4 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRI 83 (253)
Q Consensus 4 ~re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i 83 (253)
+|++++|+||||+|||||+||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 4 ~re~~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~~~~i 83 (234)
T 2br9_A 4 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMI 83 (234)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhcc
Q 025437 84 KEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASE 163 (253)
Q Consensus 84 ~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~ 163 (253)
++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++|+.+
T Consensus 84 ~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~ 163 (234)
T 2br9_A 84 REYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTE 163 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred CCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHHhhHhhhcc
Q 025437 164 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTS 234 (253)
Q Consensus 164 L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqLLrdNl~~W~~ 234 (253)
||||||+||||+||||||||||+|+|++||.+|++|||+|++++|+|+|++|+|+|+||||||||||+||+
T Consensus 164 L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 164 LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999985
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=9.3e-94 Score=637.42 Aligned_cols=232 Identities=62% Similarity=0.996 Sum_probs=226.1
Q ss_pred ccHhhHHHHHHHHHHhcCHHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhH
Q 025437 3 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLD---VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQN 79 (253)
Q Consensus 3 ~~re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~---~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~ 79 (253)
++|++++|+|||++|||||+||+++||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.+
T Consensus 26 ~~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~~ 105 (260)
T 2npm_A 26 NARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAEDA 105 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHHH
Confidence 369999999999999999999999999999988 99999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHH
Q 025437 80 VKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAA 159 (253)
Q Consensus 80 ~~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 159 (253)
++.|++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 106 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 185 (260)
T 2npm_A 106 SKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVV 185 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHHhhHhhhccC
Q 025437 160 AASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 235 (253)
Q Consensus 160 a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqLLrdNl~~W~~e 235 (253)
| .+||||||+||||+||||||||||+|+|++||.||++|||+|++++|+|+|++|+|+|+||||||||||+||++
T Consensus 186 A-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 186 A-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp H-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred H-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 9 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=3.8e-91 Score=620.37 Aligned_cols=228 Identities=23% Similarity=0.431 Sum_probs=196.7
Q ss_pred ccHhhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhh-hhhCc-hhHH
Q 025437 3 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKE-EAKGN-EQNV 80 (253)
Q Consensus 3 ~~re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~-~~~~~-~~~~ 80 (253)
|+|++++|+||||+||||||||+++| ++.+++||.||||||||||||+||++|+|||+|++++|++ +.+|+ +.++
T Consensus 27 m~r~~lv~~AKLaeqaeRYddMv~~M---~e~~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~~ 103 (268)
T 3efz_A 27 MKLSEGAYRAKLADMVGNYKDVIKVL---TESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFI 103 (268)
T ss_dssp -------------------CHHHHHH---TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHH---HhcCCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHHH
Confidence 78999999999999999999999999 7889999999999999999999999999999999999999 67777 8889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHH
Q 025437 81 KRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAA 160 (253)
Q Consensus 81 ~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 160 (253)
+.+++||++|++||..+|++||++||++|||.++++ +||||+|||||||||+|||..|++|++++++|+++|++|+++|
T Consensus 104 ~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA 182 (268)
T 3efz_A 104 QVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRE 182 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hccC--CCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH---HHHhhccCCccchhhHHHHHHHHHhhHhhhccC
Q 025437 161 ASEL--PPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE---AIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 235 (253)
Q Consensus 161 ~~~L--~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~---Ai~~ld~l~ee~y~ds~~ilqLLrdNl~~W~~e 235 (253)
+++| ||||||||||+||||||||||+|+|++||.+||+|||+ ||+++|+|+|++ |+||||||||||+||++
T Consensus 183 ~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWtsd 258 (268)
T 3efz_A 183 RSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWEQG 258 (268)
T ss_dssp HHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHTTT
T ss_pred HHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhhcc
Confidence 8889 99999999999999999999999999999999999999 999999999987 99999999999999998
Q ss_pred CCC
Q 025437 236 LPE 238 (253)
Q Consensus 236 ~~~ 238 (253)
.++
T Consensus 259 ~~~ 261 (268)
T 3efz_A 259 CSG 261 (268)
T ss_dssp CCT
T ss_pred ccc
Confidence 665
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=2.4e-82 Score=553.05 Aligned_cols=215 Identities=22% Similarity=0.252 Sum_probs=199.2
Q ss_pred cHhhHH---HHHHHHHHhcCHHHHHHHHHHHHh----cCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCc
Q 025437 4 EREHHV---YLARLAEQAERYDEMVEAMKKVAK----LDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGN 76 (253)
Q Consensus 4 ~re~~~---~~Aklaeq~ery~Dm~~~mk~~~~----~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~ 76 (253)
+|++++ |+||||+||||||||+++||++++ .+++||.||||||||||||+||++|+|||+|++++|++ +|+
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~~ 79 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LNN 79 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CSC
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cCC
Confidence 588999 999999999999999999999999 89999999999999999999999999999999999998 677
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHH
Q 025437 77 EQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAA 156 (253)
Q Consensus 77 ~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 156 (253)
+.+++.+++||++|++||..+|++|+++||++|||.+ |+||||+|||||||||+|||..|+ ++.|+++|++|
T Consensus 80 ~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~A 151 (227)
T 2o8p_A 80 DELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQDA 151 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHHH
Confidence 8899999999999999999999999999999999998 999999999999999999999998 88999999999
Q ss_pred HHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH---HHhhccCCccchhhHHHHHHHHHhhHh
Q 025437 157 TAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA---IAELDSLNEESYKDSTLIMQLLRDNLT 230 (253)
Q Consensus 157 ~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~A---i~~ld~l~ee~y~ds~~ilqLLrdNl~ 230 (253)
+++|+++||||||+||||+||||||||||+|+|++||.+|++||+.+ +..-+ +.+.+.++|+|+|+|||||.
T Consensus 152 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E--~m~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 152 FTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQE--NMDRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHC----
T ss_pred HHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccc--cchhHHHHHHHHHHHHHhcc
Confidence 99999899999999999999999999999999999999999999976 33333 23458889999999999984
No 9
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=95.16 E-value=1.1 Score=36.86 Aligned_cols=185 Identities=15% Similarity=0.105 Sum_probs=101.2
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhc-------CCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhh-hhh--hC
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKL-------DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQK-EEA--KG 75 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~-------~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~-~~~--~~ 75 (253)
.-+..++.+....|+|++++.+++++++. +.+....-...+..+|-. .+....|...+...... ... ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 34567888888999999999999998864 222222333344444322 23344444444321111 000 00
Q ss_pred chhH----HHHHHHHH-HHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHH
Q 025437 76 NEQN----VKRIKEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSL 150 (253)
Q Consensus 76 ~~~~----~~~i~~yk-~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~ 150 (253)
.... .....-|. ..=-++-...+...+.+.....-+. ....+..+-..|..|... |+ .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----~~-----~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQ-----GK-----YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTT-----TC-----HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHc-----CC-----HHHHH
Confidence 0100 00100010 0001223334444444443321111 112222233335544332 21 35799
Q ss_pred HHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025437 151 KAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 205 (253)
Q Consensus 151 ~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~ 205 (253)
..|++|+.++....++.+|.......+.+..|+. .|+.++|+...++++..+-.
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 9999999999887888889888888888877766 69999999999999876543
No 10
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.15 E-value=1 Score=36.33 Aligned_cols=59 Identities=22% Similarity=0.186 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 205 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~ 205 (253)
.+.|...|++|+.+.+...++.+|.......+.+..++. .|+.++|+...++++..+-.
T Consensus 143 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 143 AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 357999999999998887888899888888888877766 69999999999999886543
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.14 E-value=0.83 Score=35.25 Aligned_cols=161 Identities=16% Similarity=0.157 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhH-HHHHHH
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQN-VKRIKE 85 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~-~~~i~~ 85 (253)
-+..++.+..+-|+|++++.+++++++.+|.- .+=...+..+|-. .+....+...+.......+. .... .....-
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~ 82 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN-VETLLKLGKTYMD-IGLPNDAIESLKKFVVLDTT--SAEAYYILGSA 82 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCC--CHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCch--hHHHHHHHHHH
Confidence 44568888999999999999999999987763 4445555666543 34444444444332222111 1110 000000
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccC
Q 025437 86 YRQ-RVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASEL 164 (253)
Q Consensus 86 yk~-ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L 164 (253)
+.. .=-++-...+..++. +-|.. ..+ +...|..|.-+ |+ -+.|...|++|+++
T Consensus 83 ~~~~~~~~~a~~~~~~a~~-----~~~~~----~~~--~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~----- 136 (184)
T 3vtx_A 83 NFMIDEKQAAIDALQRAIA-----LNTVY----ADA--YYKLGLVYDSM-----GE-----HDKAIEAYEKTISI----- 136 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHH-----HCTTC----HHH--HHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-----
T ss_pred HHHcCCHHHHHHHHHHHHH-----hCccc----hHH--HHHHHHHHHHh-----CC-----chhHHHHHHHHHHh-----
Confidence 000 000111122222222 12321 111 22235544322 21 35789999998865
Q ss_pred CCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 165 PPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 165 ~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
.|.+| ....|.+..|+. +|+.++|+..-++|++
T Consensus 137 ~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 KPGFI---RAYQSIGLAYEG-KGLRDEAVKYFKKALE 169 (184)
T ss_dssp CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred cchhh---hHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 34443 345555555544 8999999988887764
No 12
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=93.37 E-value=2.7 Score=35.40 Aligned_cols=73 Identities=10% Similarity=0.106 Sum_probs=49.3
Q ss_pred hhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHH
Q 025437 119 TVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQ 198 (253)
Q Consensus 119 kvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~ 198 (253)
.+..+...|..|...-. -+.|...|++|+++++. .+....+...+..|.+..|+. +|+.++|+...++
T Consensus 154 ~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~k 221 (293)
T 2qfc_A 154 NLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNK 221 (293)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHHHHH
Confidence 34344455766654321 35799999999999864 443222223566777776665 7999999999999
Q ss_pred HHHHH
Q 025437 199 AFDEA 203 (253)
Q Consensus 199 afd~A 203 (253)
|+.-+
T Consensus 222 al~~~ 226 (293)
T 2qfc_A 222 AIEIS 226 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
No 13
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=93.26 E-value=3.3 Score=34.86 Aligned_cols=57 Identities=11% Similarity=0.109 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai 204 (253)
-+.|...|++|+++++. ++..+|....+..|.+..|+. +|+.++|+...++|++-+.
T Consensus 171 ~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~ 227 (293)
T 3u3w_A 171 LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHHHHHHHHH-SSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-cccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHH
Confidence 35799999999999864 666777777788999988887 7999999999999988664
No 14
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=93.18 E-value=2.6 Score=34.90 Aligned_cols=46 Identities=13% Similarity=0.088 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAF 200 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~af 200 (253)
.+.|...|++|+++. |.+| ....+.+..++ -+|+.++|+...++++
T Consensus 252 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 252 YAEALDYHRQALVLI-----PQNA---STYSAIGYIHS-LMGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHH-HHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhC-----ccch---HHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 357899999998763 3343 33445555544 4799999988777655
No 15
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=92.73 E-value=2.5 Score=37.54 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAF 200 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~af 200 (253)
++|..+|++|+++ .|.++..-.+.+++..|++...|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5789999999854 344455556677888888778899999988766655
No 16
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=92.60 E-value=0.22 Score=46.38 Aligned_cols=64 Identities=16% Similarity=0.108 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccc
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEES 214 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~ 214 (253)
+.|...|++|+.+-+..++|.||.......|.++.|.. .|+.++|..+.++|++--.. .+++++
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~---~lG~~H 409 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRV---THGREH 409 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH---HTCTTS
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHH---hcCCCC
Confidence 57999999999999889999999999999999998877 79999999999998875433 356655
No 17
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=92.58 E-value=5.1 Score=35.91 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
.+.|...|++|+++ .|.+| ....+.+..|+ -.|+.++|+...++++.-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 46788888888765 34454 34455555554 4799999999888887653
No 18
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=92.31 E-value=0.24 Score=46.98 Aligned_cols=99 Identities=8% Similarity=0.069 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcch
Q 025437 92 DELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIR 171 (253)
Q Consensus 92 ~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 171 (253)
+|-..+|..++.+-...|=|.. + ..+=-+..-|..|+..-. -+.|...|++|+++-+..|+|.||.-
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~H--p-~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTN--L-YVLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--H-HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 4556677778877776664442 1 111111222444433311 24799999999999988999999999
Q ss_pred hhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025437 172 LGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (253)
Q Consensus 172 LgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai 204 (253)
+....|.++.|+. .|+.++|..+.++|+.--.
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~ 424 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILL 424 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 9999999998877 6999999999999987543
No 19
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.26 E-value=0.94 Score=36.87 Aligned_cols=53 Identities=15% Similarity=0.051 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 148 HSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 148 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
.|...|++|+++....-.+.++.......+.+. .|...|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAY-YYTINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHH-HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHH-HHHHcCCHHHHHHHHHHHHh
Confidence 478899999999854322222222233444444 44558999999998888775
No 20
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=91.61 E-value=0.33 Score=45.32 Aligned_cols=106 Identities=14% Similarity=0.109 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcch
Q 025437 92 DELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIR 171 (253)
Q Consensus 92 ~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 171 (253)
+|-..+|...+.+-...|=|...+ .+=-+.--|.-|+.. | . -+.|...|++|+++-+..++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~---~a~~~~nLa~~y~~~-----g-~----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVY---MLHMMYQAMGVCLYM-----Q-D----WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHT-----T-C----HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchH---HHHHHHHHHHHHHhh-----c-C----HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 455667777887777766444321 111111223333322 1 1 24799999999999988999999999
Q ss_pred hhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccc
Q 025437 172 LGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEES 214 (253)
Q Consensus 172 LgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~ 214 (253)
.....|.++-|+. .|+.++|..+-++|+.=-... +++++
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~~---lG~~H 420 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEVA---HGKDH 420 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH---TCTTC
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHH---cCCCC
Confidence 9999999888776 799999999999988754333 56654
No 21
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=91.52 E-value=0.85 Score=42.51 Aligned_cols=58 Identities=10% Similarity=0.023 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 205 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~ 205 (253)
+.|...|++|+++.++-|.|.||-.+...-|.+.-|.. +|+.++|..+.++|+.--..
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 372 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSK 372 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Confidence 46788999999999889999999999988888887766 79999999999999875443
No 22
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=91.48 E-value=8.3 Score=35.35 Aligned_cols=172 Identities=18% Similarity=0.112 Sum_probs=89.5
Q ss_pred hHHHHHHHHHHhcCH-HHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHH
Q 025437 7 HHVYLARLAEQAERY-DEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKE 85 (253)
Q Consensus 7 ~~~~~Aklaeq~ery-~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~ 85 (253)
-+..++++....|+| ++++.+++++++.+|.. .+=...|..+|-.. +....|...+.......+. ......+-.-
T Consensus 104 ~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~--~~~~~~lg~~ 179 (474)
T 4abn_A 104 ALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL-VEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN--KVSLQNLSMV 179 (474)
T ss_dssp HHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC--HHHHHHHHHH
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC--HHHHHHHHHH
Confidence 355667777777888 88888888887766553 44555555555432 4444444444322211111 0111111111
Q ss_pred HHH----------HHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHH
Q 025437 86 YRQ----------RVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEA 155 (253)
Q Consensus 86 yk~----------ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 155 (253)
|.. .=-++-...++..+.+ -|.. ..++ -..|..|... -|..+. ...-.+.|..+|++
T Consensus 180 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~~~--~~lg~~~~~~-~~~~~~-~~g~~~~A~~~~~~ 246 (474)
T 4abn_A 180 LRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GRSW--YILGNAYLSL-YFNTGQ-NPKISQQALSAYAQ 246 (474)
T ss_dssp HTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HHHH--HHHHHHHHHH-HHHTTC-CHHHHHHHHHHHHH
T ss_pred HHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HHHH--HHHHHHHHHH-HHhhcc-ccchHHHHHHHHHH
Confidence 111 1112333344444443 2321 1222 2335555433 011222 12336789999999
Q ss_pred HHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 156 ATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 156 A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 247 al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 247 AEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 9977 23222555667777777766 7999999988888765
No 23
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=91.06 E-value=5.5 Score=32.51 Aligned_cols=56 Identities=18% Similarity=-0.063 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai 204 (253)
.+.|...|++|++++... .+|...+.+++.-...|...|++++|+...++++.-+-
T Consensus 199 ~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 199 FRDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 357889999999988652 23444454555445555668999999999888876543
No 24
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=90.91 E-value=3.3 Score=32.98 Aligned_cols=61 Identities=15% Similarity=0.015 Sum_probs=43.2
Q ss_pred HhhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 025437 5 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (253)
Q Consensus 5 re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 66 (253)
-+.+..++.+..+.|+|++++.++.+++..+|.-+..-...+..+|-. .+....|...+..
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 356778899999999999999999999988774444444445555543 4555566666543
No 25
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=90.86 E-value=4.8 Score=34.03 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 65 (253)
-+..++.+....|+|++++.+++++++.+|. +.+-...+..+|-. .+....|...+.
T Consensus 100 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 156 (368)
T 1fch_A 100 AWQYLGTTQAENEQELLAISALRRCLELKPD-NQTALMALAVSFTN-ESLQRQACEILR 156 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3456777777888888888888888776654 34444445555433 344444444443
No 26
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=90.85 E-value=1 Score=42.62 Aligned_cols=58 Identities=19% Similarity=0.119 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 205 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~ 205 (253)
+.|...|++|+++.+.-|.|.||-.+...-|.+..|.. .|+.++|..+.++|++--..
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 383 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMK 383 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHH
Confidence 35677899999999889999999999999999888877 79999999999999876443
No 27
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=90.73 E-value=7.6 Score=33.53 Aligned_cols=189 Identities=13% Similarity=0.022 Sum_probs=96.4
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHH----HHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHH-
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVE----ERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNV- 80 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~e----ERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~- 80 (253)
..+..++....+.|+|++++.++.++++..+. +.. =...+..+|- ..+....|...+..........++....
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 126 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEA 126 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHH
Confidence 34567888888999999999999999987655 222 2233444433 2344455555443322111110111100
Q ss_pred ----HHHHHH-HHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccc----c---CccchHHHHHH
Q 025437 81 ----KRIKEY-RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEF----K---GADDRKEAADH 148 (253)
Q Consensus 81 ----~~i~~y-k~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~----~---~~~~~~~~~~~ 148 (253)
.+..-| ...=-++-...+..++.+.... .+....+..+...|..|...-.. . ...+-....+.
T Consensus 127 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~ 201 (411)
T 4a1s_A 127 KSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTR 201 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHH
Confidence 000000 0011123334444455544331 11222233333445555444330 0 01112234678
Q ss_pred HHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025437 149 SLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (253)
Q Consensus 149 a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai 204 (253)
|...|++|++++... +.+|.......+.+.. |.-.|+.++|+...++|+.-+-
T Consensus 202 A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~al~~~~ 254 (411)
T 4a1s_A 202 AVEFYQENLKLMRDL--GDRGAQGRACGNLGNT-YYLLGDFQAAIEHHQERLRIAR 254 (411)
T ss_dssp HHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHH-HHHcCChHHHHHHHHHHHHHHH
Confidence 999999999988652 2234444444455544 4558999999999988877553
No 28
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=89.97 E-value=0.49 Score=38.26 Aligned_cols=56 Identities=13% Similarity=0.040 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
+.|...|++|+.+.+...+|.||.......|.+..++. +|+.++|+...+++++-.
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 57999999999999887888899998888888887766 799999999999998864
No 29
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=89.89 E-value=7.6 Score=32.23 Aligned_cols=47 Identities=11% Similarity=0.058 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
.+.|...|++|+++ .|.+| ....+.+..++ ..|+.++|+...++|+.
T Consensus 288 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 35788888888765 34443 45556666554 48999999988887764
No 30
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=89.54 E-value=1.8 Score=37.77 Aligned_cols=73 Identities=14% Similarity=0.075 Sum_probs=48.5
Q ss_pred hhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHH
Q 025437 118 STVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 197 (253)
Q Consensus 118 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak 197 (253)
...+|+-.+|.+|...-. -+.|...|++|+.+++. . | +|...+.+++.--..|..+|+.++|+...+
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~-~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~ 167 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V-K-DRIEKAEFFFKMSESYYYMKQTYFSMDYAR 167 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-C-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C-C-CHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 345566667877754422 35799999999998754 3 2 344444444444444445899999999999
Q ss_pred HHHHHH
Q 025437 198 QAFDEA 203 (253)
Q Consensus 198 ~afd~A 203 (253)
+|++-+
T Consensus 168 ~al~~~ 173 (383)
T 3ulq_A 168 QAYEIY 173 (383)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888754
No 31
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=89.46 E-value=7.6 Score=31.63 Aligned_cols=189 Identities=12% Similarity=0.024 Sum_probs=98.0
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHH----HHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHH-
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEE----RNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNV- 80 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eE----RnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~- 80 (253)
..+...+....+.|+|++++.++++++...|. +.+. ...+..+|- ..+....+...+.....-....+.....
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 45677889999999999999999999987655 2221 223333332 2333444444443221111111111110
Q ss_pred ----HHHHHH-HHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccC----------ccchHHH
Q 025437 81 ----KRIKEY-RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKG----------ADDRKEA 145 (253)
Q Consensus 81 ----~~i~~y-k~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~----------~~~~~~~ 145 (253)
....-| ...--++-...+...+.+... ..++...+..+...|..|...-.... .++-...
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRE-----LNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNA 158 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-----hcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHH
Confidence 000001 001112233344445554433 22233334444455666665544110 1122334
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai 204 (253)
.+.|...|++|+.++.. . +.+|.......+.+. .|.-.|+.++|+...++++.-+-
T Consensus 159 ~~~A~~~~~~a~~~~~~-~-~~~~~~~~~~~~l~~-~~~~~~~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTA-L-GDRAAQGRAFGNLGN-THYLLGNFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHHHHHHHHHHHHHH-H-TCHHHHHHHHHHHHH-HHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c-CCHHHHHHHHHHHHH-HHHHhCCHHHHHHHHHHHHHHHH
Confidence 67888899999988754 2 223433344444444 44558999999999998887653
No 32
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=89.27 E-value=9.1 Score=33.83 Aligned_cols=56 Identities=16% Similarity=0.087 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHhccC--CCCC----cchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASEL--PPTH----PIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L--~pt~----pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
.+.|...|++++..-...+ .|.+ |.......+.+..++. .|+.++|+...++++..
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~~ 266 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIEL 266 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhh
Confidence 5678888888887443323 4444 5555666666666555 79999999998887653
No 33
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=89.11 E-value=9.7 Score=32.37 Aligned_cols=59 Identities=8% Similarity=-0.068 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 66 (253)
+.++.++....+.|+|++++.++++++..+|.- .+=...+..+|-. .+....|...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD-AEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC-HHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 347888999999999999999999999877653 4555566666543 3555566665543
No 34
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=88.58 E-value=0.47 Score=44.09 Aligned_cols=57 Identities=14% Similarity=0.099 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai 204 (253)
+.|...|++|+++.++-|+|.||..+...-|.+.-|.. .|+.++|..+.++++.--.
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~ 360 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYR 360 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHH
Confidence 45677788888777778999999999999998887766 7999999999999877543
No 35
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=88.43 E-value=5.4 Score=28.64 Aligned_cols=55 Identities=15% Similarity=0.131 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
-+.|...|++|++++.. .+ .+|.......+.+.. |.-.|+.++|+...++|+.-+
T Consensus 105 ~~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 105 YEKAIDYHLKHLAIAQE-LK-DRIGEGRACWSLGNA-YTALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHH-HHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-cc-chHhHHHHHHHHHHH-HHHccCHHHHHHHHHHHHHHH
Confidence 35789999999999864 22 223333344455544 455799999999888887654
No 36
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=88.09 E-value=1.4 Score=32.69 Aligned_cols=48 Identities=15% Similarity=0.240 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
-+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.-
T Consensus 24 ~~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence 35799999999875 45554 455677777776 79999999999888764
No 37
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=87.87 E-value=11 Score=32.82 Aligned_cols=47 Identities=11% Similarity=0.046 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
.+.|...|++|+.+ .|.+| ....+.+..+ ...|+.++|+...++++.
T Consensus 311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~-~~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAY-LIEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHH-HHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 35688888888765 34444 3444555544 458999999998888764
No 38
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=87.73 E-value=8.6 Score=30.14 Aligned_cols=58 Identities=10% Similarity=0.074 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 66 (253)
-+..+|.+..+.|+|++++.++++++...+. +..-...+..+|-. .+....|...+..
T Consensus 59 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 59 PYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGAGNVYVV-KEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 3456777777888888888888888776554 23333444444432 3444445555443
No 39
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=87.66 E-value=2.5 Score=34.19 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=38.7
Q ss_pred ccHhhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 025437 3 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (253)
Q Consensus 3 ~~re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 65 (253)
|+-+.++.+|.+.-+.|+|++++.+++++++.+|.-. +-...+..+|-. .+....|...+.
T Consensus 1 ~n~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~-~~~~~l~~~~~~-~~~~~~A~~~~~ 61 (272)
T 3u4t_A 1 MNDDVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSP-YIYNRRAVCYYE-LAKYDLAQKDIE 61 (272)
T ss_dssp ----CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCS-TTHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH-HHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 3456788999999999999999999999998766532 233444444332 344444444443
No 40
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=87.65 E-value=16 Score=33.20 Aligned_cols=55 Identities=9% Similarity=0.008 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
.+.|...|++|+++... . +.+|-....+++.-...|...|+.++|+...++++..
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46799999999988643 2 4456553334444444455589999999999888764
No 41
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=87.51 E-value=10 Score=30.81 Aligned_cols=64 Identities=13% Similarity=0.027 Sum_probs=44.8
Q ss_pred HhhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHhhhhhhhhHHHHHHHhHhh
Q 025437 5 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVELT--VEERNLVSVGYKNVIGARRASWRILSSIEQ 69 (253)
Q Consensus 5 re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls--~eERnLlsvayKn~i~~~R~s~R~l~~~e~ 69 (253)
-+.+..+|...-+.|+|++++..+.+++...|.-. .+=...+..+|-. .+....|...+.....
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQ 80 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 35677888999999999999999999998766543 4445555555543 4556666666655443
No 42
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=86.96 E-value=16 Score=32.28 Aligned_cols=172 Identities=10% Similarity=-0.060 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHH
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEY 86 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~y 86 (253)
-+..++.+....|+|++++.++++++...|.-. +-...+..+|- ..+....+...+.......+.. .........-|
T Consensus 306 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~ 382 (514)
T 2gw1_A 306 VYYHRGQMNFILQNYDQAGKDFDKAKELDPENI-FPYIQLACLAY-RENKFDDCETLFSEAKRKFPEA-PEVPNFFAEIL 382 (514)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCS-HHHHHHHHHTT-TTTCHHHHHHHHHHHHHHSTTC-SHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhH-HHHHHHHHHHH-HcCCHHHHHHHHHHHHHHcccC-HHHHHHHHHHH
Confidence 345677888888888888888888887766533 23333344332 2344555555554433221111 11111111111
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccCC
Q 025437 87 -RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELP 165 (253)
Q Consensus 87 -k~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~ 165 (253)
+..--++-......++.+- |........+..+-..|..|.... ..| -.+.|...|++|+.+ .
T Consensus 383 ~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~-----~ 445 (514)
T 2gw1_A 383 TDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL-----D 445 (514)
T ss_dssp HHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH-----C
T ss_pred HHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh-----C
Confidence 0111122223333333322 222111111112222344332200 012 245788899998865 3
Q ss_pred CCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 166 PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 166 pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
|.+| ....+.+..+. -.|+.++|+...+++++-
T Consensus 446 ~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 446 PRSE---QAKIGLAQMKL-QQEDIDEAITLFEESADL 478 (514)
T ss_dssp TTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred cccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence 4443 33445555444 579999999988887764
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=86.56 E-value=15 Score=31.86 Aligned_cols=168 Identities=14% Similarity=0.085 Sum_probs=83.8
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHHHH
Q 025437 9 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQ 88 (253)
Q Consensus 9 ~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~yk~ 88 (253)
..+|.+..+.|+|++++.++.+++...|. +..-...+..+|-. .+....|...+.......+.. .........-|..
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~ 223 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKNDN-TEAFYKISTLYYQ 223 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHCSC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH
Confidence 44577788899999999999999887654 44445555555543 344555555554433222110 0111111111111
Q ss_pred -HHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhhee--------ccccccccccccCccchHHHHHHHHHHHHHHHHH
Q 025437 89 -RVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKM--------KGDYYRYLAEFKGADDRKEAADHSLKAYEAATAA 159 (253)
Q Consensus 89 -ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~Km--------kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 159 (253)
.=-++-......++. +-|.. ......+..+ .|+.|.- .| -.+.|...|++|+.+
T Consensus 224 ~g~~~~A~~~~~~~~~-----~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~g-----~~~~A~~~~~~~l~~ 286 (450)
T 2y4t_A 224 LGDHELSLSEVRECLK-----LDQDH--KRCFAHYKQVKKLNKLIESAEELIR-----DG-----RYTDATSKYESVMKT 286 (450)
T ss_dssp TTCHHHHHHHHHHHHH-----HCTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-----HT-----CHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH-----hCCCh--HHHHHHHHHHHHHHHHHHHHHHHHH-----cC-----CHHHHHHHHHHHHhc
Confidence 001112222222222 12221 1111111000 1222211 11 145788888888763
Q ss_pred HhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 160 AASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 160 a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
.|.+|.....++..-+..|.-.|+.++|+...++++.
T Consensus 287 -----~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 287 -----EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp -----CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred -----CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4667665444444444455568999999999988764
No 44
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=86.51 E-value=14 Score=31.31 Aligned_cols=54 Identities=19% Similarity=-0.004 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
+.|...|++|+.++.. . + +|..++.+++.-...|...|+.++|+...++|+.-+
T Consensus 204 ~~A~~~~~~al~~~~~-~-~-~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 204 RDAVIAHEQRLLIAKE-F-G-DKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLA 257 (406)
T ss_dssp HHHHHHHHHHHHHHHH-T-T-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c-C-CcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 5688899999988765 2 2 233333333333334445799999988888877654
No 45
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=86.40 E-value=2.1 Score=37.37 Aligned_cols=75 Identities=13% Similarity=0.093 Sum_probs=50.3
Q ss_pred chhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHH
Q 025437 117 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLA 196 (253)
Q Consensus 117 eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~ia 196 (253)
....+|+-.+|.+|...-. -+.|...|++|+.++.. ++ .+|..-....|.+.+|+. +|+.++|+...
T Consensus 98 ~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~ 164 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYHI 164 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHHH
Confidence 3445566677877654422 35799999999998854 32 234444455555555554 89999999999
Q ss_pred HHHHHHHH
Q 025437 197 KQAFDEAI 204 (253)
Q Consensus 197 k~afd~Ai 204 (253)
++|++-.-
T Consensus 165 ~~al~~~~ 172 (378)
T 3q15_A 165 LQALDIYQ 172 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887543
No 46
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=86.38 E-value=15 Score=31.66 Aligned_cols=176 Identities=9% Similarity=-0.000 Sum_probs=89.6
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCCCH-----HHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCc-hhHHHHH
Q 025437 10 YLARLAEQAERYDEMVEAMKKVAKLDVELTV-----EERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGN-EQNVKRI 83 (253)
Q Consensus 10 ~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~-----eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~-~~~~~~i 83 (253)
+++.+....|+|++++.++++....-..... +=...+..+|-. .+..-.|...+.....--+..+. ......+
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 186 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRLLQC 186 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHHHHH
Confidence 4788888899999999999998865333222 223334444433 33334444433221111111111 0000000
Q ss_pred -----HHHH-HHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHH
Q 025437 84 -----KEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAAT 157 (253)
Q Consensus 84 -----~~yk-~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~ 157 (253)
.-|. ..=-++=...+...+.+... ..++......+...|..|..+-. -+.|...|++|+
T Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~lg~~y~~~g~----------~~~A~~~~~~al 251 (383)
T 3ulq_A 187 HSLFATNFLDLKQYEDAISHFQKAYSMAEA-----EKQPQLMGRTLYNIGLCKNSQSQ----------YEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-----cCChHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHH
Confidence 0000 00012223334444444332 12222222233335666644321 357999999999
Q ss_pred HHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025437 158 AAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (253)
Q Consensus 158 ~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai 204 (253)
++++..-. .|.......|.+..|+. +|+.++|+...++|+.-+-
T Consensus 252 ~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 252 AVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 99865322 14444455556555554 7999999999998887653
No 47
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=86.26 E-value=19 Score=32.68 Aligned_cols=48 Identities=10% Similarity=0.119 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
.+.|...|++++++. |.+| ....+.+.. |...|+.++|....+++++-
T Consensus 532 ~~~A~~~~~~~~~~~-----p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~~ 579 (597)
T 2xpi_A 532 YDAAIDALNQGLLLS-----TNDA---NVHTAIALV-YLHKKIPGLAITHLHESLAI 579 (597)
T ss_dssp HHHHHHHHHHHHHHS-----SCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHhc
Confidence 457888998888662 4454 333344443 45589999999988887753
No 48
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=86.21 E-value=15 Score=31.50 Aligned_cols=178 Identities=11% Similarity=0.009 Sum_probs=87.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCC-----HHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchh----
Q 025437 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELT-----VEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQ---- 78 (253)
Q Consensus 8 ~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls-----~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~---- 78 (253)
+..++.+....|+|++++.++++.++....+. ..=...+..+|- ..+....|...+.....-....++..
T Consensus 89 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 167 (411)
T 4a1s_A 89 YSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLSEGR 167 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHHHHH
Confidence 45778888888999999999998875421111 112223333332 23444444444432211111111110
Q ss_pred -HHHHHHHHHHH-H-----------------HHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCc
Q 025437 79 -NVKRIKEYRQR-V-----------------EDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGA 139 (253)
Q Consensus 79 -~~~~i~~yk~k-i-----------------~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~ 139 (253)
...+..-|... - -++-...+...+.+.... .+....+..+-..|..|...-.
T Consensus 168 ~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~---- 238 (411)
T 4a1s_A 168 ALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLLGD---- 238 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHcCC----
Confidence 01111111110 0 233444455555554332 1122233333444555543321
Q ss_pred cchHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025437 140 DDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (253)
Q Consensus 140 ~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai 204 (253)
.+.|...|++|+.+... . .++...+.+++.-...|--.|+.++|+...++|+..+-
T Consensus 239 ------~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 239 ------FQAAIEHHQERLRIARE-F--GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp ------HHHHHHHHHHHHHHHHH-H--TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred ------hHHHHHHHHHHHHHHHh-c--CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 34688888888888754 1 13333343444444445557888888888888776543
No 49
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=85.28 E-value=12 Score=29.59 Aligned_cols=165 Identities=9% Similarity=0.004 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHH
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEY 86 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~y 86 (253)
-+..+|.+..+.|+|++++.++++++..+|.. .+-...+..+|-. .+....|...+....+..+.. .........-|
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~~ 115 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALEIDPSS-ADAHAALAVVFQT-EMEPKLADEEYRKALASDSRN-ARVLNNYGGFL 115 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCcCc-HHHHHHHHHHH
Confidence 35677888888999999999999998776543 4444455555533 344555555554332221110 01111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCC
Q 025437 87 RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPP 166 (253)
Q Consensus 87 k~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~p 166 (253)
.. ..--.+.+..++..+- ....+.. ...+...|..|... |+ .+.|...|++|+... |
T Consensus 116 ~~------~g~~~~A~~~~~~~~~-~~~~~~~-~~~~~~la~~~~~~-----g~-----~~~A~~~~~~~~~~~-----~ 172 (252)
T 2ho1_A 116 YE------QKRYEEAYQRLLEASQ-DTLYPER-SRVFENLGLVSLQM-----KK-----PAQAKEYFEKSLRLN-----R 172 (252)
T ss_dssp HH------TTCHHHHHHHHHHHTT-CTTCTTH-HHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHC-----S
T ss_pred HH------HhHHHHHHHHHHHHHh-CccCccc-HHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHhcC-----c
Confidence 11 1112234444444332 1111211 22222335544322 21 356788888887652 3
Q ss_pred CCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 167 THPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 167 t~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
.+| ....+.+..++. .|+.++|....++++.
T Consensus 173 ~~~---~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 173 NQP---SVALEMADLLYK-EREYVPARQYYDLFAQ 203 (252)
T ss_dssp CCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred ccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 332 333444444444 7888888888777654
No 50
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.99 E-value=19 Score=31.32 Aligned_cols=179 Identities=12% Similarity=0.019 Sum_probs=91.1
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHH-----HHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHH
Q 025437 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEE-----RNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKR 82 (253)
Q Consensus 8 ~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eE-----RnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~ 82 (253)
+..++++....|+|++++++++++....+.++... ++++...+. ..+..-.+..............++......
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 66789999999999999999999887655565432 222222221 112222222222211111111111100000
Q ss_pred HHHHHHHHH------HHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHH
Q 025437 83 IKEYRQRVE------DELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAA 156 (253)
Q Consensus 83 i~~yk~ki~------~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 156 (253)
+....-++- .+-..+.++++... +...+....+-++-..|..|.-+ ++ .++|...|++|
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~A~~~~~~a 201 (434)
T 4b4t_Q 137 LSIKLATLHYQKKQYKDSLALINDLLREF-----KKLDDKPSLVDVHLLESKVYHKL-----RN-----LAKSKASLTAA 201 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHH-----TTSSCSTHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHccChHHHHHHHHHHHHHH-----HhcccchhHHHHHHHHHHHHHHh-----Cc-----HHHHHHHHHHH
Confidence 101111111 11222222222222 12222233343333444444322 21 35799999999
Q ss_pred HHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025437 157 TAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (253)
Q Consensus 157 ~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai 204 (253)
..++.. .+ ..|.-.|...+...-+|...++..+|+..-.++|...-
T Consensus 202 l~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~ 247 (434)
T 4b4t_Q 202 RTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYH 247 (434)
T ss_dssp HHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 999854 43 23344566677777777888999999999888887643
No 51
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=84.73 E-value=17 Score=30.74 Aligned_cols=58 Identities=14% Similarity=0.227 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 66 (253)
-+..++.+..+.|+|++++.+++++++.+|.. ..-...+..+|.. .+....|...+..
T Consensus 101 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~ 158 (365)
T 4eqf_A 101 AWQFLGITQAENENEQAAIVALQRCLELQPNN-LKALMALAVSYTN-TSHQQDACEALKN 158 (365)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHc-cccHHHHHHHHHH
Confidence 45678888999999999999999999876653 4445555555543 3444555555543
No 52
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=84.70 E-value=15 Score=29.86 Aligned_cols=180 Identities=13% Similarity=0.089 Sum_probs=89.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcC-------CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhh-hh--hCch
Q 025437 8 HVYLARLAEQAERYDEMVEAMKKVAKLD-------VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKE-EA--KGNE 77 (253)
Q Consensus 8 ~~~~Aklaeq~ery~Dm~~~mk~~~~~~-------~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~-~~--~~~~ 77 (253)
+..++.+....|+|++++.++++++... .+....-...+..+|- ..+....|...+....... .. ....
T Consensus 72 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 150 (311)
T 3nf1_A 72 LNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKDHP 150 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-HcCcHHHHHHHHHHHHHHHHHhcCCCCh
Confidence 4567888888999999999999988642 1112222333344432 2344455555554322211 00 0001
Q ss_pred hHH----HHHHHH-HHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHH
Q 025437 78 QNV----KRIKEY-RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKA 152 (253)
Q Consensus 78 ~~~----~~i~~y-k~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~a 152 (253)
... .+..-| ...=-++-.......+.+.....-+. ....+..+-..|..|... |+ .+.|...
T Consensus 151 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----g~-----~~~A~~~ 217 (311)
T 3nf1_A 151 DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD---DPNVAKTKNNLASCYLKQ-----GK-----FKQAETL 217 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT---CHHHHHHHHHHHHHHHHH-----TC-----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHc-----CC-----HHHHHHH
Confidence 110 000000 00011233344445555544322111 112222223335554332 11 3578888
Q ss_pred HHHHHHHHhcc-----------------------------------------CCCCCcchhhhhhhhHHHHHHHhCChHH
Q 025437 153 YEAATAAAASE-----------------------------------------LPPTHPIRLGLALNFSVFYYEILNSPER 191 (253)
Q Consensus 153 Y~~A~~~a~~~-----------------------------------------L~pt~pirLgL~LN~SVF~yei~~~~~~ 191 (253)
|++|++++... ....+|.......+.+..|+. .|+.++
T Consensus 218 ~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~ 296 (311)
T 3nf1_A 218 YKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFEA 296 (311)
T ss_dssp HHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHHH
T ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHHH
Confidence 88888875331 122456666666666666655 799999
Q ss_pred HHHHHHHHHHH
Q 025437 192 ACHLAKQAFDE 202 (253)
Q Consensus 192 A~~iak~afd~ 202 (253)
|+...++|+.-
T Consensus 297 A~~~~~~al~l 307 (311)
T 3nf1_A 297 AETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988888764
No 53
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=84.68 E-value=15 Score=30.06 Aligned_cols=56 Identities=14% Similarity=-0.081 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCC-cchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTH-PIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~-pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
.+.|...|++|+.+....-.+.+ |-......+.+..++ ..|+.++|+...++++..
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 35789999999998754333322 333345556666554 479999999988888754
No 54
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=84.44 E-value=17 Score=30.49 Aligned_cols=58 Identities=9% Similarity=-0.036 Sum_probs=40.2
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 65 (253)
..+..++.+..+.|+|++++.++.++++..|. +..=...+..+|.. .+....|...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 35778999999999999999999999987665 34445555555543 244444444443
No 55
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=84.21 E-value=14 Score=29.44 Aligned_cols=59 Identities=12% Similarity=0.068 Sum_probs=38.0
Q ss_pred HhhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 025437 5 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (253)
Q Consensus 5 re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 65 (253)
-+-+..++.+..+.|+|++++..+.+++..+|.. .+=...+..+|-. .+....|...+.
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~-~g~~~~A~~~~~ 63 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKENPQD-PEALYWLARTQLK-LGLVNPALENGK 63 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3456677888888888888888888888776653 4445555555433 344445555543
No 56
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=84.19 E-value=18 Score=30.58 Aligned_cols=189 Identities=11% Similarity=0.012 Sum_probs=94.7
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHH---
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTV---EERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNV--- 80 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~---eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~--- 80 (253)
.+..++...-..|+|++++.++.+++...|.-.. .=...+..+|-. .+....|...+.....-....++....
T Consensus 11 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 89 (406)
T 3sf4_A 11 ELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLGEAKA 89 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 4567888888999999999999999987655221 122334444432 334444444443211111111111100
Q ss_pred --HHHHHH-HHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheecccccccccc-------ccCc---cchHHHHH
Q 025437 81 --KRIKEY-RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAE-------FKGA---DDRKEAAD 147 (253)
Q Consensus 81 --~~i~~y-k~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE-------~~~~---~~~~~~~~ 147 (253)
....-| ...=-++-...+..++.+.... .++...+..+-..|..|...-. ...+ ++-....+
T Consensus 90 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~ 164 (406)
T 3sf4_A 90 SGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQ 164 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHH
Confidence 000001 0001123333444444444322 1112222222233444433322 1111 12333467
Q ss_pred HHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025437 148 HSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (253)
Q Consensus 148 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai 204 (253)
.|...|++|+.++.. . +.+|.......|.+..++ -.|+.++|+...++|+.-+-
T Consensus 165 ~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 165 AAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HHTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Confidence 899999999998865 3 334444445555555554 47999999999988876543
No 57
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=83.73 E-value=35 Score=33.56 Aligned_cols=167 Identities=11% Similarity=0.101 Sum_probs=87.6
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHh-HhhhhhhhCchhHHHHHH
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS-IEQKEEAKGNEQNVKRIK 84 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~-~e~~~~~~~~~~~~~~i~ 84 (253)
+-+..++.+..+.|+|++++.+.+++++.+|+. .+=.+-|..+|.. .+..-.|...+.. ++.+... ......+-.
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~-~~a~~nLg~~l~~-~g~~~eA~~~~~~Al~l~P~~--~~a~~nLg~ 85 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-AAAHSNLASVLQQ-QGKLQEALMHYKEAIRISPTF--ADAYSNMGN 85 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC--HHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCC--HHHHHHHHH
Confidence 345678999999999999999999999988875 3445555666553 2444444444432 2222110 001111100
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhc
Q 025437 85 EYR--QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAAS 162 (253)
Q Consensus 85 ~yk--~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 162 (253)
-|. .+. ++=...++..+.+ -|.. ..+++ ..|..|+-+ |. .+.|..+|++|+++
T Consensus 86 ~l~~~g~~-~~A~~~~~kAl~l-----~P~~----~~a~~--~Lg~~~~~~-----g~-----~~eAi~~~~~Al~l--- 140 (723)
T 4gyw_A 86 TLKEMQDV-QGALQCYTRAIQI-----NPAF----ADAHS--NLASIHKDS-----GN-----IPEAIASYRTALKL--- 140 (723)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHH-----CTTC----HHHHH--HHHHHHHHT-----TC-----HHHHHHHHHHHHHH---
T ss_pred HHHHcCCH-HHHHHHHHHHHHh-----CCCC----HHHHH--HHHHHHHHc-----CC-----HHHHHHHHHHHHHh---
Confidence 010 000 1111222223322 2221 11211 224444322 11 45789999999865
Q ss_pred cCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 025437 163 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEL 207 (253)
Q Consensus 163 ~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~l 207 (253)
.|.+| ....|.+. .|..+|+.++|++..++++.-.-..+
T Consensus 141 --~P~~~---~a~~~L~~-~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 --KPDFP---DAYCNLAH-CLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp --CSCCH---HHHHHHHH-HHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred --CCCCh---HHHhhhhh-HHHhcccHHHHHHHHHHHHHhChhHH
Confidence 34444 33444444 44557999999988888877655443
No 58
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=83.49 E-value=18 Score=29.89 Aligned_cols=168 Identities=13% Similarity=0.095 Sum_probs=86.7
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHHHH
Q 025437 9 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQ 88 (253)
Q Consensus 9 ~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~yk~ 88 (253)
..+|.+....|+|++++.++++++...|. +.+-...+..+|-. .+....|...+.......+.. .........-|..
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~~ 200 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKSDN-TEAFYKISTLYYQ 200 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH
Confidence 44588889999999999999999987664 34555555555543 355566666665433222111 0111111111111
Q ss_pred -HHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhhee--------ccccccccccccCccchHHHHHHHHHHHHHHHHH
Q 025437 89 -RVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKM--------KGDYYRYLAEFKGADDRKEAADHSLKAYEAATAA 159 (253)
Q Consensus 89 -ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~Km--------kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 159 (253)
.=-++-...+..++.+ -|. ++....+|.++ .|..+. ..|+ .+.|...|+++++.
T Consensus 201 ~~~~~~A~~~~~~a~~~-----~~~--~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~~-----~~~A~~~~~~~~~~ 263 (359)
T 3ieg_A 201 LGDHELSLSEVRECLKL-----DQD--HKRCFAHYKQVKKLNKLIESAEELI-----RDGR-----YTDATSKYESVMKT 263 (359)
T ss_dssp HTCHHHHHHHHHHHHHH-----CTT--CHHHHHHHHHHHHHHHHHHHHHHHH-----HTTC-----HHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhh-----Ccc--chHHHHHHHHHHHHHHHHHHHHHHH-----HcCC-----HHHHHHHHHHHHhc
Confidence 0011122222222221 222 22222222221 122221 1111 35788888888765
Q ss_pred HhccCCCCCcchhh-hhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 160 AASELPPTHPIRLG-LALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 160 a~~~L~pt~pirLg-L~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
. |.+|.... +..+.+..++. .|+.++|+...++++..
T Consensus 264 ~-----~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 264 E-----PSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp C-----CSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred C-----CCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 3 45554433 44455555554 89999999998888764
No 59
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=82.48 E-value=15 Score=28.20 Aligned_cols=166 Identities=11% Similarity=-0.034 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHH
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEY 86 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~y 86 (253)
-+..++.+....|+|++++.++++++...|.. .+-...+..+|-. .+....|...+.......+.. .........-|
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~ 86 (225)
T 2vq2_A 10 IKTQLAMEYMRGQDYRQATASIEDALKSDPKN-ELAWLVRAEIYQY-LKVNDKAQESFRQALSIKPDS-AEINNNYGWFL 86 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCccc-hHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCCC-hHHHHHHHHHH
Confidence 35677888889999999999999999876653 4444555555542 344555555554332221110 01111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccC-CCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccCC
Q 025437 87 RQRVEDELAKICNDILSVIDEHLI-PSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELP 165 (253)
Q Consensus 87 k~ki~~EL~~~C~eii~lid~~Li-p~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~ 165 (253)
.. ...--.+.+..++..+- |. .+. ....+...|..|... |+ .+.|...|+++++. .
T Consensus 87 ~~-----~~~~~~~A~~~~~~~~~~~~--~~~-~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~-----~ 143 (225)
T 2vq2_A 87 CG-----RLNRPAESMAYFDKALADPT--YPT-PYIANLNKGICSAKQ-----GQ-----FGLAEAYLKRSLAA-----Q 143 (225)
T ss_dssp HT-----TTCCHHHHHHHHHHHHTSTT--CSC-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-----S
T ss_pred HH-----hcCcHHHHHHHHHHHHcCcC--Ccc-hHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-----C
Confidence 11 00001122333333221 21 121 122223345555332 21 35688888888765 2
Q ss_pred CCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 166 PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 166 pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 144 ~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 144 PQFP---PAFKELARTKML-AGQLGDADYYFKKYQSR 176 (225)
T ss_dssp TTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred CCCc---hHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 3343 233444444444 79999999988887663
No 60
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=82.21 E-value=1.8 Score=32.91 Aligned_cols=55 Identities=16% Similarity=0.245 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHhccC---CCC-------CcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASEL---PPT-------HPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L---~pt-------~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
-+.|...|++|+.+..... .|+ +|....+..|.+..|+. +|+.++|+..+.+|+.
T Consensus 27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 3579999999999864321 233 67777888888888776 7999999999888854
No 61
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=81.56 E-value=18 Score=28.77 Aligned_cols=140 Identities=18% Similarity=0.240 Sum_probs=76.7
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHH
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEY 86 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~y 86 (253)
-+..++.+..+.|+|++++..+++++..+|.. .+=...+..+|...- +. . ......+| .....+
T Consensus 41 a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~lg~~~~~~~-------~~--~-~~~~~~~g--~~~~A~--- 104 (217)
T 2pl2_A 41 ALYWLARTQLKLGLVNPALENGKTLVARTPRY-LGGYMVLSEAYVALY-------RQ--A-EDRERGKG--YLEQAL--- 104 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHH-------HT--C-SSHHHHHH--HHHHHH---
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHHhh-------hh--h-hhhccccc--CHHHHH---
Confidence 45678889999999999999999999887764 344444555543320 00 0 00000000 011111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCC
Q 025437 87 RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPP 166 (253)
Q Consensus 87 k~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~p 166 (253)
.....++.+ -|. + ..++ -..|..|... |+ .+.|..+|++|+++. .
T Consensus 105 ---------~~~~~al~~-----~P~--~--~~~~--~~lg~~~~~~-----g~-----~~~A~~~~~~al~~~-~---- 149 (217)
T 2pl2_A 105 ---------SVLKDAERV-----NPR--Y--APLH--LQRGLVYALL-----GE-----RDKAEASLKQALALE-D---- 149 (217)
T ss_dssp ---------HHHHHHHHH-----CTT--C--HHHH--HHHHHHHHHT-----TC-----HHHHHHHHHHHHHHC-C----
T ss_pred ---------HHHHHHHHh-----Ccc--c--HHHH--HHHHHHHHHc-----CC-----hHHHHHHHHHHHhcc-c----
Confidence 112222221 232 1 1122 2335554332 21 357999999999875 2
Q ss_pred CCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 167 THPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 167 t~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+| ....|.+..|.. +|+.++|+...++++..
T Consensus 150 -~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 150 -TP---EIRSALAELYLS-MGRLDEALAQYAKALEQ 180 (217)
T ss_dssp -CH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred -ch---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 22 233566665555 79999998888887753
No 62
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=81.36 E-value=19 Score=28.71 Aligned_cols=49 Identities=16% Similarity=0.154 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 148 HSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 148 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
.|...|++++..... ..|......++.+..++. .|+.++|+...++++.
T Consensus 195 ~a~~~~~~~~~~~~~----~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 195 TLMERLKADATDNTS----LAEHLSETNFYLGKYYLS-LGDLDSATALFKLAVA 243 (275)
T ss_dssp HHHHHHHHHCCSHHH----HHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccccc----ccccccHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 456666666543321 122223445555555554 7999999988877764
No 63
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=80.87 E-value=4.7 Score=29.78 Aligned_cols=46 Identities=17% Similarity=0.167 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|..+|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5789999999865 34443 455667766665 7999999988887764
No 64
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=80.36 E-value=11 Score=26.06 Aligned_cols=53 Identities=9% Similarity=0.038 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.+... .++.+|.......+.+..++. +|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 5789999999988753 455555545566777766665 7999999887777665
No 65
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=80.34 E-value=5.2 Score=28.73 Aligned_cols=56 Identities=18% Similarity=-0.033 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai 204 (253)
.+.|...|++|++++.. ..+|..++.+++.-...|-..|+.++|+...++|+.-+-
T Consensus 25 ~~~A~~~~~~al~~~~~---~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 25 FRDAVIAHEQRLLIAKE---FGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLAR 80 (164)
T ss_dssp HHHHHHHHHHHHHHHHH---HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---hCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 35789999999999865 234455555555445555558999999999988877653
No 66
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=80.04 E-value=32 Score=30.55 Aligned_cols=54 Identities=15% Similarity=0.075 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhc--cCCCCCcc---hhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 148 HSLKAYEAATAAAAS--ELPPTHPI---RLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 148 ~a~~aY~~A~~~a~~--~L~pt~pi---rLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
.+...|.+|....+. .+.|.+|- .++.++..--..|...|+.++|+...++++.
T Consensus 213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~ 271 (537)
T 3fp2_A 213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESIN 271 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 344556666555433 35566653 2455565555666778999999999888865
No 67
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=79.52 E-value=20 Score=28.01 Aligned_cols=31 Identities=6% Similarity=0.016 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~ 37 (253)
-+..++.+....|+|++++.++++++...+.
T Consensus 81 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 81 SFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 4557888888999999999999999987655
No 68
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=78.94 E-value=25 Score=28.65 Aligned_cols=44 Identities=14% Similarity=0.024 Sum_probs=25.5
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGY 50 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvay 50 (253)
+.++.+|....+.|+|++++.++++++...|. +..-...+..+|
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~ 65 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQ 65 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 34556666666677777777777776665544 333334444443
No 69
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=78.64 E-value=6.4 Score=33.03 Aligned_cols=53 Identities=8% Similarity=-0.010 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhh-hhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGL-ALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL-~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
+.|...|++|+.+. .+..++..... ..|.+++|+ -+|+.++|+..-++|++.+
T Consensus 132 ~~Ai~~~~~al~~~---~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 132 EYCILELKKLLNQQ---LTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHHTC---CCCSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh---cccccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHH
Confidence 57899999999854 22333434343 445555554 4899999999999988643
No 70
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=77.88 E-value=23 Score=27.69 Aligned_cols=56 Identities=16% Similarity=0.120 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHH
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRIL 64 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l 64 (253)
+.+..++...-..|+|++++.++.+++..+ -+..=...+..+|-. .+....|...+
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~-~~~~~~A~~~~ 61 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRAAAEYE-KGEYETAISTL 61 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH-cccHHHHHHHH
Confidence 345678888888899999999999988766 334444455555432 23334444444
No 71
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=77.38 E-value=6.9 Score=28.73 Aligned_cols=53 Identities=8% Similarity=-0.003 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+++... .++.++.+-....|.+..+ .-+|+.++|+..-++|+.
T Consensus 59 ~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 59 AECVQFCEKAVEVGRE-TRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcc-cchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHh
Confidence 5799999999999754 5555554333445555554 558999999987666554
No 72
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=77.33 E-value=34 Score=29.42 Aligned_cols=174 Identities=8% Similarity=0.060 Sum_probs=86.1
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHH-----HHHHHHHHHhhhhhhhhHHHHHHHh-HhhhhhhhCchhHHHH
Q 025437 9 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVE-----ERNLVSVGYKNVIGARRASWRILSS-IEQKEEAKGNEQNVKR 82 (253)
Q Consensus 9 ~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~e-----ERnLlsvayKn~i~~~R~s~R~l~~-~e~~~~~~~~~~~~~~ 82 (253)
.+++...-..|+|++++.++++.....+..... =..-+..+|-. .+....|...+.. ++......+.......
T Consensus 105 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 183 (378)
T 3q15_A 105 FFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYH-MKQTHVSMYHILQALDIYQNHPLYSIRTIQ 183 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTSTTCHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHhCCCchhhHHH
Confidence 356777788899999999999988653333321 12233333332 2333344443322 1111110000100000
Q ss_pred H-----HHHH-HHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHH
Q 025437 83 I-----KEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAA 156 (253)
Q Consensus 83 i-----~~yk-~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 156 (253)
+ .-|. ..--++=...+...+.+.... .++......+--.|..|...-. -+.|...|++|
T Consensus 184 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~~~----------~~~A~~~~~~a 248 (378)
T 3q15_A 184 SLFVIAGNYDDFKHYDKALPHLEAALELAMDI-----QNDRFIAISLLNIANSYDRSGD----------DQMAVEHFQKA 248 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHTC----------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHH
Confidence 0 0000 000122233344445444321 1122222222233555533211 35799999999
Q ss_pred HHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 157 TAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 157 ~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+++++.. .+|.......|.+..++ -+|+.++|+...++|+.-
T Consensus 249 l~~~~~~---~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 249 AKVSREK---VPDLLPKVLFGLSWTLC-KAGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp HHHHHHH---CGGGHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhh---CChhHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHH
Confidence 9998654 34555444555555555 489999999988887764
No 73
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=77.21 E-value=24 Score=27.48 Aligned_cols=59 Identities=8% Similarity=-0.031 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 66 (253)
..+..+|...-+.|+|++++.++++++...|. +.+-...+..+|- ..+....|...+..
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~-~~~~~~~la~~~~-~~~~~~~A~~~~~~ 82 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIEENKE-DAIPYINFANLLS-SVNELERALAFYDK 82 (243)
T ss_dssp ------------------CCTTHHHHHTTCTT-CHHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 45567788888999999999999999876554 3444445555543 24555566665544
No 74
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=76.79 E-value=5.2 Score=35.44 Aligned_cols=54 Identities=11% Similarity=0.085 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHhc-cCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAAS-ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~-~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|.++|++|+++.+. .....||-.+...-|.+.-|+. +|+.++|+..-+++..
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHH
Confidence 5799999999999865 3445678777777788877776 7999999877666543
No 75
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=75.23 E-value=9.3 Score=26.04 Aligned_cols=46 Identities=17% Similarity=0.265 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 5788999999865 34444 345667666655 7999999888777654
No 76
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=74.66 E-value=25 Score=26.45 Aligned_cols=46 Identities=11% Similarity=0.036 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 4688888888865 34443 445566666655 7999999888777664
No 77
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=74.21 E-value=10 Score=28.97 Aligned_cols=55 Identities=15% Similarity=0.065 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
+.|...|++|+.+++. .+ .+|...+.+++.-...|--+|++++|+...++|+.-+
T Consensus 83 ~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 83 DAARRCFLEERELLAS-LP-EDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5789999999999863 43 2454455554444445555899999999999988754
No 78
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=73.44 E-value=13 Score=24.28 Aligned_cols=47 Identities=19% Similarity=0.320 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHhc
Confidence 5788899999865 23443 345566666555 79999999888777653
No 79
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=73.31 E-value=13 Score=31.02 Aligned_cols=188 Identities=14% Similarity=0.030 Sum_probs=92.2
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH-----hhhhhhhhHHHHHHHh-HhhhhhhhCchhHH
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGY-----KNVIGARRASWRILSS-IEQKEEAKGNEQNV 80 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvay-----Kn~i~~~R~s~R~l~~-~e~~~~~~~~~~~~ 80 (253)
.+...+...-..|+|++++.++++..+..+. ..+....+..-| -...+..-.|...+.. ++............
T Consensus 77 ~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 155 (293)
T 2qfc_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKEEY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNL 155 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhccccC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 3455666677789999999999988876555 333322221111 1112233455554432 22111111000000
Q ss_pred ----HHHHHHH-HHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHH
Q 025437 81 ----KRIKEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEA 155 (253)
Q Consensus 81 ----~~i~~yk-~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 155 (253)
..-.-|. ..=-++-....+..+.+.+. .|. ++...+..+-..|..|..+ |+ -+.|...|++
T Consensus 156 ~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~-----~~-----y~~Al~~~~k 221 (293)
T 2qfc_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLD-----SR-----YEESLYQVNK 221 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHH-----hh-----HHHHHHHHHH
Confidence 1111111 11112344455566655543 232 1111111222345555422 11 3579999999
Q ss_pred HHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHH-HHHHHHHHHHHHHhhccCCccchh
Q 025437 156 ATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERA-CHLAKQAFDEAIAELDSLNEESYK 216 (253)
Q Consensus 156 A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A-~~iak~afd~Ai~~ld~l~ee~y~ 216 (253)
|++++.. ..++..++.+++.--..|.-+|+.++| ....++| +.-.+.++...++
T Consensus 222 al~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~A----l~~~~~~~~~~~~ 276 (293)
T 2qfc_A 222 AIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA----SFFFDILEMHAYK 276 (293)
T ss_dssp HHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHH----HHHHHHTTCHHHH
T ss_pred HHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH----HHHHHHhCcHhhH
Confidence 9999853 234445665555555566678999999 4434444 4444455555553
No 80
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=73.27 E-value=11 Score=26.73 Aligned_cols=47 Identities=17% Similarity=0.275 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|...|++|+++ .|.+ ..+..|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5788899998865 3444 4556677776666 79999999988888764
No 81
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=71.98 E-value=11 Score=32.19 Aligned_cols=55 Identities=11% Similarity=0.035 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|.....+++.-
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 46889999999998764444556666666667776666 69999998888887654
No 82
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=71.82 E-value=19 Score=27.84 Aligned_cols=86 Identities=21% Similarity=0.081 Sum_probs=52.9
Q ss_pred cCHHHHHHHHHHHH---hcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhH--h--hhhhhhCchhHHHHHHHHHHHHH
Q 025437 19 ERYDEMVEAMKKVA---KLDVELTVEERNLVSVGYKNVIGARRASWRILSSI--E--QKEEAKGNEQNVKRIKEYRQRVE 91 (253)
Q Consensus 19 ery~Dm~~~mk~~~---~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~--e--~~~~~~~~~~~~~~i~~yk~ki~ 91 (253)
+|.|..++.+|.-+ -+|++||.|-|.=|.--.|...-.-|-|.|-+..- . .+....+ .+-++-..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIRRDAnd~lKKl~Kdk-----eISEDe~kr~e 85 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDK-----EVNWFDISQAL 85 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCT-----TSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcC-----CCCHHHHHhHH
Confidence 56777788887654 35899999999999988888888778888876431 1 0000001 01123344455
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 025437 92 DELAKICNDILSVIDEHL 109 (253)
Q Consensus 92 ~EL~~~C~eii~lid~~L 109 (253)
++|..+.+..+.-||..|
T Consensus 86 ~eIQKLTDkyIkkID~ll 103 (121)
T 3lf9_A 86 WEIQKLTDVAVKKIDEVL 103 (121)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 556666555555555543
No 83
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=71.21 E-value=45 Score=27.98 Aligned_cols=52 Identities=8% Similarity=-0.031 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAF 200 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~af 200 (253)
-+.|...|++|+.+... .+. +| ..+.++.-.+..|-.+|+.++|+...++++
T Consensus 171 ~~~A~~~~~~al~~~~~-~~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKE-MEN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-TTC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH-cCC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 35799999999999864 222 22 333333334445556799999988777654
No 84
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=71.09 E-value=15 Score=24.59 Aligned_cols=46 Identities=20% Similarity=0.182 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.+. |.+ .....+.+..++. .|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQLD-----PEE---SKYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHHC-----CCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----cCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 57888999988652 333 3455667776665 7999999988777764
No 85
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=70.98 E-value=18 Score=25.35 Aligned_cols=71 Identities=14% Similarity=0.107 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLR 226 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqLLr 226 (253)
+.|...|++++.. .|.+|......++.+..++. +|+.++|+..-++++... . +......+...+..++
T Consensus 56 ~~A~~~~~~~~~~-----~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~~~----p--~~~~~~~a~~~l~~l~ 123 (129)
T 2xev_A 56 QLAEAQFRDLVSR-----YPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVATQY----P--GSDAARVAQERLQSIR 123 (129)
T ss_dssp HHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS----T--TSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHC----C--CChHHHHHHHHHHHHH
Confidence 5688888888754 46776655666666666665 799999998877766531 1 1222444555555555
Q ss_pred hhH
Q 025437 227 DNL 229 (253)
Q Consensus 227 dNl 229 (253)
.++
T Consensus 124 ~~~ 126 (129)
T 2xev_A 124 LGQ 126 (129)
T ss_dssp ---
T ss_pred hhh
Confidence 443
No 86
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=68.95 E-value=18 Score=24.27 Aligned_cols=48 Identities=17% Similarity=0.137 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|...|++|++. .|.+|.. ...+.+..|+. +|+.++|+...++++..
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHhc
Confidence 4678888888754 3445421 45666666665 79999998887777643
No 87
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.67 E-value=9.9 Score=27.21 Aligned_cols=50 Identities=24% Similarity=0.197 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|...|++|+. +.|.+|....+..+.+..++. .|+.++|+...++++..
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhh
Confidence 456777777763 455555556666677666555 68888888887777653
No 88
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=67.49 E-value=19 Score=28.81 Aligned_cols=55 Identities=18% Similarity=0.196 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhh-----hhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLG-----LALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-----L~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
-+.|..+|++|+++.-. .|+..++.+. ...|-+.-+.. +|+.++|+..+.+|+.-
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHh
Confidence 35799999999998744 3333333333 66777766655 79999999988887763
No 89
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=67.18 E-value=49 Score=26.79 Aligned_cols=31 Identities=16% Similarity=0.110 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~ 37 (253)
-+..++.+..+.|+|++++.+++++++.+|.
T Consensus 57 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 87 (327)
T 3cv0_A 57 AWRSLGLTQAENEKDGLAIIALNHARMLDPK 87 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCcC
Confidence 3557788889999999999999999887654
No 90
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=66.86 E-value=44 Score=26.20 Aligned_cols=60 Identities=13% Similarity=-0.020 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHh
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIE 68 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e 68 (253)
-+..+|.+..+.|+|++++.++++++...+. +..-...+..+|-. .+....|.+.+....
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYE-QKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 3557788899999999999999999987665 34444555555543 455566666665443
No 91
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=66.45 E-value=19 Score=25.47 Aligned_cols=46 Identities=20% Similarity=0.127 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.+ .|.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4577777777654 23333 344455555444 6777777777776654
No 92
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=65.66 E-value=44 Score=25.70 Aligned_cols=31 Identities=6% Similarity=-0.051 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~ 37 (253)
.+..++......|+|++++.++++++...+.
T Consensus 40 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~ 70 (198)
T 2fbn_A 40 DIKEEGNEFFKKNEINEAIVKYKEALDFFIH 70 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 3556788888899999999999999876443
No 93
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=65.64 E-value=19 Score=26.31 Aligned_cols=46 Identities=7% Similarity=0.017 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+..-++|+.
T Consensus 64 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 64 QRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 5789999999865 34443 345566666555 7999999887777664
No 94
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=65.45 E-value=37 Score=24.76 Aligned_cols=48 Identities=15% Similarity=0.099 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
+.|..+|++|+.+ .|.+|. ..+|.+..|+. +|+.++|+...++++...
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5789999999865 456654 34566666555 799999998888777653
No 95
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=64.41 E-value=63 Score=27.06 Aligned_cols=54 Identities=11% Similarity=0.004 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcch-hhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIR-LGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pir-LgL~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
.+.|...|++|+++... . .+|.. .....|.+.+|.. +|+.++|+...++|+.-.
T Consensus 131 ~~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 35799999999999854 2 12333 3345566666655 799999999888887643
No 96
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=63.96 E-value=80 Score=28.12 Aligned_cols=58 Identities=10% Similarity=0.142 Sum_probs=39.0
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhh-hhHHHHHHH
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGA-RRASWRILS 65 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~-~R~s~R~l~ 65 (253)
+-+.+++.+..+.|+|++++....+++..+|.. ..=.+.+..+|... +. ...+...+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~-~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELNAAN-YTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhCccC-HHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 345677888888999999999999999888763 33344445555433 32 455555553
No 97
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=63.59 E-value=24 Score=24.43 Aligned_cols=47 Identities=17% Similarity=0.102 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALEA-MKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHh
Confidence 5788899998865 23333 345566665554 79999999888877653
No 98
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=63.39 E-value=11 Score=26.91 Aligned_cols=31 Identities=10% Similarity=0.018 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~ 37 (253)
-+++++.++.+.|+|++++.+..++.+.+|+
T Consensus 45 A~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 45 ALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 4567788888888888888888888877766
No 99
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=63.35 E-value=34 Score=23.68 Aligned_cols=58 Identities=12% Similarity=0.193 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 66 (253)
-+..++.+....|+|++++.++++++..+|.. .+=...+..+|.. .+....|...+..
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPHLRAALDFDPTY-SVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc-HHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 45678888999999999999999999887754 4445566666654 3555556555543
No 100
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=62.74 E-value=66 Score=26.71 Aligned_cols=52 Identities=10% Similarity=-0.034 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchh-hhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRL-GLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirL-gL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
.+.|..+|++|+++.... . +|... ....|.+.++.. +|++++|+...+++..
T Consensus 134 ~~~A~~~~~~Al~~~~~~-~--~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQD-Q--SVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHHHHT-T--CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhC-C--ChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 357999999999987531 1 23232 345566666666 7999999987776654
No 101
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=62.56 E-value=26 Score=23.97 Aligned_cols=49 Identities=24% Similarity=0.377 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
.+.|...|++|+... |.+| .+..+.+..++. .|+.++|+...++++...
T Consensus 20 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~ 68 (131)
T 1elr_A 20 FDTALKHYDKAKELD-----PTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVG 68 (131)
T ss_dssp HHHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-----CccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhc
Confidence 357888888888652 3343 445566666655 799999999998887754
No 102
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=62.53 E-value=22 Score=26.63 Aligned_cols=15 Identities=7% Similarity=0.022 Sum_probs=7.1
Q ss_pred hCChHHHHHHHHHHH
Q 025437 186 LNSPERACHLAKQAF 200 (253)
Q Consensus 186 ~~~~~~A~~iak~af 200 (253)
+|+.++|+...++++
T Consensus 92 ~g~~~~A~~~~~~al 106 (164)
T 3sz7_A 92 MADYKGAKEAYEKGI 106 (164)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHH
Confidence 455555544444443
No 103
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=62.26 E-value=25 Score=24.76 Aligned_cols=48 Identities=8% Similarity=0.005 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 4689999999865 34443 445566665555 799999999888887754
No 104
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=62.00 E-value=22 Score=26.76 Aligned_cols=47 Identities=21% Similarity=0.312 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
-+.|..+|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++..
T Consensus 21 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 21 FDGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 35789999999865 34453 334444544444 7999998888777654
No 105
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=61.95 E-value=36 Score=23.41 Aligned_cols=57 Identities=7% Similarity=0.061 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 65 (253)
-+..++.+..+.|+|++++.+++++++.+|.... =...+..+|.. .+..-.|...+.
T Consensus 9 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 9 TRYALAQEHLKHDNASRALALFEELVETDPDYVG-TYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH-HHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4567899999999999999999999998877544 45556666643 344444444443
No 106
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=61.18 E-value=76 Score=26.91 Aligned_cols=31 Identities=13% Similarity=0.266 Sum_probs=20.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 025437 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVEL 38 (253)
Q Consensus 8 ~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~L 38 (253)
+..++.+..+.|+|++++.++++++..+|+.
T Consensus 70 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 100 (388)
T 1w3b_A 70 YSNLGNVYKERGQLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHcCcch
Confidence 4556666666777777777777766655543
No 107
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=60.89 E-value=45 Score=24.20 Aligned_cols=57 Identities=19% Similarity=0.170 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 025437 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (253)
Q Consensus 8 ~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 66 (253)
+..++.+..+.|+|++++..+++++...|. +..-...+..+|- ..+....|...+..
T Consensus 11 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~A~~~~~~ 67 (186)
T 3as5_A 11 YRDKGISHAKAGRYSQAVMLLEQVYDADAF-DVDVALHLGIAYV-KTGAVDRGTELLER 67 (186)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTTCCTTSC-CHHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-ChHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 445788888889999999999988766554 2333334444443 23444455555443
No 108
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=60.78 E-value=33 Score=23.78 Aligned_cols=49 Identities=16% Similarity=-0.022 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
.+.|...|++|+.+ .|.+| ....+.+..|.. +|+.++|+...++++...
T Consensus 35 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 35 FDAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhc
Confidence 35788999999865 34443 334556655554 799999999888887654
No 109
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=59.98 E-value=50 Score=24.46 Aligned_cols=29 Identities=7% Similarity=0.083 Sum_probs=14.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 025437 8 HVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (253)
Q Consensus 8 ~~~~Aklaeq~ery~Dm~~~mk~~~~~~~ 36 (253)
+..++.+..+.|+|++++.++.+++..+|
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p 42 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALSIAP 42 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 33444445555555555555555554433
No 110
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=59.24 E-value=25 Score=26.36 Aligned_cols=47 Identities=11% Similarity=0.027 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|..+|++|+.+ .|.||. ..+|.++.|+. +|+.++|+...++|+.-
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5799999999865 455653 44666666655 79999998777666553
No 111
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=58.96 E-value=41 Score=23.10 Aligned_cols=72 Identities=18% Similarity=0.138 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLL 225 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqLL 225 (253)
.+.|...|++|+++ .|.+|. ...+.+..|+ -+|+.++|+...++|+.-+-.. + ...-...+.++|
T Consensus 23 ~~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~----~--~~~~~~~l~~~l 87 (100)
T 3ma5_A 23 ASRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREE----G--TQKDLSELQDAK 87 (100)
T ss_dssp HHHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHH----S--CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcC----C--chhHHHHHHHHH
Confidence 35788899999865 344443 4555665554 4899999999988888764322 1 123344555555
Q ss_pred HhhHhhh
Q 025437 226 RDNLTLW 232 (253)
Q Consensus 226 rdNl~~W 232 (253)
+..=..|
T Consensus 88 ~~~~~~~ 94 (100)
T 3ma5_A 88 LKAEGLE 94 (100)
T ss_dssp HHHHTTC
T ss_pred HHccccc
Confidence 5444444
No 112
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=58.94 E-value=28 Score=23.30 Aligned_cols=46 Identities=11% Similarity=-0.036 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Confidence 5678888888765 34443 34556665554 47999999887776653
No 113
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=58.26 E-value=26 Score=29.29 Aligned_cols=53 Identities=8% Similarity=-0.052 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|..+|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 106 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQI 106 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5799999999999754 32 55555666666666667789999999988888764
No 114
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=58.17 E-value=35 Score=23.21 Aligned_cols=46 Identities=17% Similarity=0.156 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.. .|.+ .....+.+..++. .|+.++|+....+++.
T Consensus 29 ~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 29 EAAVHFYGKAIEL-----NPAN---AVYFCNRAAAYSK-LGNYAGAVQDCERAIC 74 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHH-hhchHHHHHHHHHHHh
Confidence 3455566666543 1222 1223333433333 5666666666666554
No 115
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=57.71 E-value=37 Score=22.60 Aligned_cols=47 Identities=23% Similarity=0.222 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 5688888888764 34443 344555555554 79999999988888764
No 116
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=57.50 E-value=36 Score=23.11 Aligned_cols=47 Identities=17% Similarity=0.109 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|...|++|+.+ .|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 5788889888865 34443 33455555554 479999999888777654
No 117
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=56.63 E-value=1.1e+02 Score=27.25 Aligned_cols=47 Identities=15% Similarity=0.102 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhh
Q 025437 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIG 55 (253)
Q Consensus 8 ~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~ 55 (253)
+..++.+..+.|+|++++.++.++++.+|. +..=.+-+..+|....+
T Consensus 203 ~~~lg~~~~~~g~~~eAl~~~~~al~l~P~-~~~a~~~lg~~l~~l~~ 249 (382)
T 2h6f_A 203 WQHRQWVIQEFKLWDNELQYVDQLLKEDVR-NNSVWNQRYFVISNTTG 249 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcC
Confidence 345666666777777777777777766654 33444445555554333
No 118
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=56.03 E-value=49 Score=23.11 Aligned_cols=58 Identities=12% Similarity=0.029 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 66 (253)
-+..++.+..+.|+|++++.+++++++.+|+- .+=...+..+|-. .+....|...+..
T Consensus 29 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~ 86 (117)
T 3k9i_A 29 CYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH-QALRVFYAMVLYN-LGRYEQGVELLLK 86 (117)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 35678888889999999999999999887765 5555566666644 4556666666643
No 119
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=55.95 E-value=35 Score=24.65 Aligned_cols=47 Identities=9% Similarity=-0.172 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 5788889988865 23443 344566655544 79999999888887653
No 120
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=55.82 E-value=31 Score=25.73 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 025437 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (253)
Q Consensus 8 ~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~ 37 (253)
...+|++..+.|+|+.++.+++++++.+|.
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~~p~ 63 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINVQER 63 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999988775
No 121
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=55.35 E-value=79 Score=25.29 Aligned_cols=50 Identities=16% Similarity=0.194 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhh--------------hhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLA--------------LNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~--------------LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
.+.|...|++++.. .|.+|...... ++.+..|+. .|+.++|+...++++.
T Consensus 113 ~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~ 176 (261)
T 3qky_A 113 TRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFD 176 (261)
T ss_dssp HHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 45788888887754 35555443332 666666665 7999999998887764
No 122
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=55.34 E-value=29 Score=26.65 Aligned_cols=48 Identities=13% Similarity=0.075 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
-+.|..+|++|+.+ .|.+|. ...|.++.|.. +|++++|+..-++|+.-
T Consensus 86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35799999999865 355653 45677776655 89999999877776654
No 123
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=55.13 E-value=35 Score=25.44 Aligned_cols=46 Identities=11% Similarity=0.156 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+++ .|.|| ....+.+..|+ -+|+.++|+..-++|+.
T Consensus 48 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDP---KAHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 5788889988865 34554 33444555444 47999999887777764
No 124
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.78 E-value=39 Score=23.82 Aligned_cols=46 Identities=11% Similarity=-0.015 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.+ .|.+ .....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGD---VKALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5788888888865 3444 3344566665555 7999999888777765
No 125
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=54.09 E-value=11 Score=33.61 Aligned_cols=54 Identities=15% Similarity=0.223 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHhcc--------CCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASE--------LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~--------L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.+.... ....+|....+.+|.+..|+. +|+.++|+..+++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 57888999999865431 111467778888899888875 7999999999888865
No 126
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=54.05 E-value=98 Score=25.98 Aligned_cols=108 Identities=26% Similarity=0.373 Sum_probs=61.3
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHHHHH-
Q 025437 11 LARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQR- 89 (253)
Q Consensus 11 ~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~yk~k- 89 (253)
.|+|.+....|-.||+-+|.-.. +..|..|.=.-||=.+.. ++.+. + . ...|++-..|
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~-----nf~e~RLiYDHYKlKvdE----------LEK~~--K-d---SeKI~RNQsKL 158 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK-----ETDKYRERYDHYKVKLDN----------LEKKN--K-D---QERIERNQQKF 158 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH----------HHHHT--C-C---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHhHHH----------HHhcc--c-h---HHHHHHhHHHh
Confidence 47777877777777777754211 133444555555543332 22211 1 1 2233333333
Q ss_pred --HHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhc
Q 025437 90 --VEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAAS 162 (253)
Q Consensus 90 --i~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 162 (253)
-+.--..+|-++|+-.++ +-|.|||.++|..+. +=...--|-+|++.|.+
T Consensus 159 ssAEtaYkqvcsDiInkMnk-----------------ll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 159 KDAEAAYSSVCADLIQKMET-----------------VWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred hhHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 344556677777777664 348899999887643 23345568888888754
No 127
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=53.76 E-value=1e+02 Score=26.08 Aligned_cols=43 Identities=16% Similarity=0.074 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGY 50 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvay 50 (253)
-+..++.+.-+.|+++++..+.+.++..+|. +.+-...+..+|
T Consensus 35 ~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~-~~~~~~~lg~~~ 77 (388)
T 1w3b_A 35 VLLLLSSIHFQCRRLDRSAHFSTLAIKQNPL-LAEAYSNLGNVY 77 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHH
Confidence 4566788888899999999999888877654 344455555554
No 128
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=53.65 E-value=47 Score=22.27 Aligned_cols=46 Identities=20% Similarity=0.347 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 4577777777654 23332 233444444444 6888888777776654
No 129
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=53.60 E-value=28 Score=19.96 Aligned_cols=26 Identities=27% Similarity=0.676 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025437 81 KRIKEYRQRVEDELAKICNDILSVID 106 (253)
Q Consensus 81 ~~i~~yk~ki~~EL~~~C~eii~lid 106 (253)
+.++.|+.+|.+.|..+.+.|-.++-
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45788999999999999998877754
No 130
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=52.43 E-value=42 Score=24.18 Aligned_cols=48 Identities=21% Similarity=0.140 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
.+.|...|++|+.+. |.+ ..+..+.+..++. .|+.++|+...++++..
T Consensus 29 ~~~A~~~~~~al~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 76 (166)
T 1a17_A 29 YENAIKFYSQAIELN-----PSN---AIYYGNRSLAYLR-TECYGYALGDATRAIEL 76 (166)
T ss_dssp HHHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 356888899888652 333 3445566665554 79999999988887653
No 131
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=52.35 E-value=50 Score=22.11 Aligned_cols=47 Identities=19% Similarity=0.320 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|...|++++.. .|.+| ....+.+..++. .|+.++|....++++..
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 4678888888765 33343 344566666655 79999998887777653
No 132
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=50.63 E-value=1.5e+02 Score=27.08 Aligned_cols=31 Identities=13% Similarity=-0.050 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~ 37 (253)
-+..+|.+..+.|+|++++.+++++++.+|.
T Consensus 25 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 55 (568)
T 2vsy_A 25 AWLMLADAELGMGDTTAGEMAVQRGLALHPG 55 (568)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3556778888889999999999998876654
No 133
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=50.40 E-value=42 Score=26.40 Aligned_cols=32 Identities=13% Similarity=0.169 Sum_probs=27.0
Q ss_pred HhhHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 025437 5 REHHVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (253)
Q Consensus 5 re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~ 36 (253)
-+.++..+...-+.|+|++++.++.+++..+|
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNI 35 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 35678888888899999999999999987654
No 134
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=50.37 E-value=43 Score=25.60 Aligned_cols=46 Identities=15% Similarity=0.128 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.+. |.+ .....|.+..|+. +|+.++|+...++++.
T Consensus 54 ~~A~~~~~~al~~~-----~~~---~~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINRD-----KHL---AVAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----ccc---hHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 57889999998762 334 3455666766665 7999999998888877
No 135
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=50.18 E-value=70 Score=23.15 Aligned_cols=29 Identities=21% Similarity=0.200 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 025437 8 HVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (253)
Q Consensus 8 ~~~~Aklaeq~ery~Dm~~~mk~~~~~~~ 36 (253)
+..+|....+.|+|++++.++++++..+|
T Consensus 21 ~~~~a~~~~~~g~~~~A~~~~~~al~~~p 49 (142)
T 2xcb_A 21 LYALGFNQYQAGKWDDAQKIFQALCMLDH 49 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHhCC
Confidence 34455555555666666666666555444
No 136
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=50.15 E-value=39 Score=28.52 Aligned_cols=73 Identities=15% Similarity=0.100 Sum_probs=44.2
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025437 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (253)
Q Consensus 36 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~L 109 (253)
|+||.|-|.=|....|...-.-|-|.|-+..--...- +.-.+...+-++-.++.+++|..+.+..+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~l-Kk~~K~~~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDL-KKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999888888888887753111000 000000001133445566666666666666666543
No 137
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=49.48 E-value=1.5e+02 Score=26.74 Aligned_cols=163 Identities=12% Similarity=0.033 Sum_probs=76.0
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhh-hHHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHH
Q 025437 16 EQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGAR-RASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDEL 94 (253)
Q Consensus 16 eq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~-R~s~R~l~~~e~~~~~~~~~~~~~~i~~yk~ki~~EL 94 (253)
+..+++++.+..+.++... .+-+.+-...+..+|-. .+.. ..|...+....+..+.. ......+-.-|...
T Consensus 79 ~~~~~~~~al~~l~~~~~~-~~~~a~~~~~lg~~~~~-~g~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~~----- 150 (474)
T 4abn_A 79 DVQEEMEKTLQQMEEVLGS-AQVEAQALMLKGKALNV-TPDYSPEAEVLLSKAVKLEPEL-VEAWNQLGEVYWKK----- 150 (474)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHTS-SSSCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHHhcc-CchhHHHHHHHHHHHHh-ccccHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHc-----
Confidence 3445577777777776543 33556666666666654 4555 56666654322221110 01111111111110
Q ss_pred HHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchhhh
Q 025437 95 AKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGL 174 (253)
Q Consensus 95 ~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL 174 (253)
.--.+.+..++..|--. +.. ..+...|..|+.+.. ....++..-.+.|...|++|+++ .|.+|. .
T Consensus 151 -g~~~~A~~~~~~al~~~---p~~--~~~~~lg~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~---~ 215 (474)
T 4abn_A 151 -GDVTSAHTCFSGALTHC---KNK--VSLQNLSMVLRQLQT-DSGDEHSRHVMDSVRQAKLAVQM-----DVLDGR---S 215 (474)
T ss_dssp -TCHHHHHHHHHHHHTTC---CCH--HHHHHHHHHHTTCCC-SCHHHHHHHHHHHHHHHHHHHHH-----CTTCHH---H
T ss_pred -CCHHHHHHHHHHHHhhC---CCH--HHHHHHHHHHHHhcc-CChhhhhhhHHHHHHHHHHHHHh-----CCCCHH---H
Confidence 01122333333322111 222 333445766665422 11122333456899999999875 344542 3
Q ss_pred hhhhHHHHHHH---h----CChHHHHHHHHHHHH
Q 025437 175 ALNFSVFYYEI---L----NSPERACHLAKQAFD 201 (253)
Q Consensus 175 ~LN~SVF~yei---~----~~~~~A~~iak~afd 201 (253)
..|.+..|... . |+.++|+...++|+.
T Consensus 216 ~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 216 WYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 34444444432 1 667777776666654
No 138
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=48.41 E-value=32 Score=27.50 Aligned_cols=78 Identities=13% Similarity=0.046 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHh--ccCCCCCcchh-hhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHH
Q 025437 147 DHSLKAYEAATAAAA--SELPPTHPIRL-GLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQ 223 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~--~~L~pt~pirL-gL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilq 223 (253)
+.|..+|.+|+++-. -.+.|.++--+ .-..|-++-+. -+|+.++|+.--++|+.-.=. +...+++...+.+
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~-~lgr~eEAl~~y~kAlel~p~-----d~~~~~~~~~~~~ 147 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD-GLGRGAEAMPEFKKVVEMIEE-----RKGETPGKERMME 147 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHH-----CCSCCTTHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH-HCCCHHHHHHHHHHHHhcCCC-----cHHHHHHHHHHHH
Confidence 478999999998722 24566554211 01134444333 489999998876666654211 2233555555566
Q ss_pred HHHhhHh
Q 025437 224 LLRDNLT 230 (253)
Q Consensus 224 LLrdNl~ 230 (253)
.+.+.+.
T Consensus 148 ~~~~~~~ 154 (159)
T 2hr2_A 148 VAIDRIA 154 (159)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 139
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=48.36 E-value=15 Score=31.97 Aligned_cols=54 Identities=19% Similarity=0.251 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhccC-------CCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASEL-------PPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L-------~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|..+|++|+.+....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
No 140
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=48.00 E-value=81 Score=23.29 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=27.6
Q ss_pred HHHHHHHHh---cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhh
Q 025437 10 YLARLAEQA---ERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGAR 57 (253)
Q Consensus 10 ~~Aklaeq~---ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~ 57 (253)
+.-+-|+++ |||||+|++-++.+ .+|+-|+|.+-++.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa-----------~yL~eAmkltqs~q 56 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT-----------TYLSEAMKLTESEQ 56 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH-----------HHHHHHHTTCCCHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH-----------HHHHHHHHhhccHH
Confidence 444556655 99999999999987 47888888774443
No 141
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=47.67 E-value=28 Score=31.68 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHhccCCC--------CCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPP--------THPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~p--------t~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.+... .+. .+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 285 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 5788889998877532 110 134667788888888776 7999999988887754
No 142
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=46.67 E-value=24 Score=32.25 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEL 207 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~l 207 (253)
.+.|...|++|+.. +| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 62 ~~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 45788888888743 23 3457888888999999999999999999999998653
No 143
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=46.00 E-value=62 Score=23.39 Aligned_cols=47 Identities=17% Similarity=0.121 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
+.|...|++++.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALDN-LGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHHH-cCcHHHHHHHHHHHHhc
Confidence 4678888888765 23333 344555555544 79999999998887754
No 144
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=45.98 E-value=74 Score=22.24 Aligned_cols=53 Identities=15% Similarity=0.046 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
..|..-|+.|+......-. ..+.+-.+..++++-+| -+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 4688899999887643211 12334444455555444 58999999999888875
No 145
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=45.57 E-value=41 Score=30.83 Aligned_cols=15 Identities=13% Similarity=-0.059 Sum_probs=7.1
Q ss_pred hCChHHHHHHHHHHH
Q 025437 186 LNSPERACHLAKQAF 200 (253)
Q Consensus 186 ~~~~~~A~~iak~af 200 (253)
+|+.++|+...++|+
T Consensus 87 ~g~~~eA~~~~~~al 101 (477)
T 1wao_1 87 LGKFRAALRDYETVV 101 (477)
T ss_dssp HTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 455555544444443
No 146
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=45.50 E-value=32 Score=28.87 Aligned_cols=46 Identities=13% Similarity=0.171 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQA 199 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~a 199 (253)
.+.|...|++|+. ++|.+|.. +.++++.|+.. .|+.++|+.+-++|
T Consensus 115 ~~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~~-~~~~~~A~~~~~~a 160 (308)
T 2ond_A 115 YEKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFARR-AEGIKSGRMIFKKA 160 (308)
T ss_dssp HHHHHHHHHHHHT-----SSSSCTHH--HHHHHHHHHHH-HHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----ccccCccH--HHHHHHHHHHH-hcCHHHHHHHHHHH
Confidence 3456777777763 45555521 44555565544 45666555444444
No 147
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=45.49 E-value=1.3e+02 Score=24.92 Aligned_cols=30 Identities=10% Similarity=0.177 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 025437 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (253)
Q Consensus 8 ~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~ 37 (253)
.+.++.+..+.|+++++...+.+++...|.
T Consensus 102 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 131 (308)
T 2ond_A 102 YFAYADYEESRMKYEKVHSIYNRLLAIEDI 131 (308)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSSSS
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcccc
Confidence 346778888889999999999998876553
No 148
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=44.74 E-value=1e+02 Score=23.41 Aligned_cols=45 Identities=13% Similarity=-0.009 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYK 51 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayK 51 (253)
+-+..++....+.|+|++++.++++++..+|. +.+=...|..+|-
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~ 81 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQ 81 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHH
Confidence 34556677777778888888888777776554 3444444555543
No 149
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=44.10 E-value=65 Score=21.09 Aligned_cols=28 Identities=25% Similarity=0.321 Sum_probs=15.9
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 025437 9 VYLARLAEQAERYDEMVEAMKKVAKLDV 36 (253)
Q Consensus 9 ~~~Aklaeq~ery~Dm~~~mk~~~~~~~ 36 (253)
..++.+..+.|+|++++.++++++...+
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 37 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLDP 37 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCc
Confidence 3455555555666666666666655443
No 150
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=43.70 E-value=59 Score=26.77 Aligned_cols=73 Identities=18% Similarity=0.231 Sum_probs=43.7
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025437 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (253)
Q Consensus 36 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~L 109 (253)
|+||.|-|.=|..-.|...-.-|.+.|.+..--.+.- +.-.+...+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKI-KEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999888888888887743111000 000000001234445566666666666666666543
No 151
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=43.18 E-value=1.2e+02 Score=23.82 Aligned_cols=62 Identities=5% Similarity=-0.051 Sum_probs=42.4
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHhhhhhhhhHHHHHHHhHh
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVE--LTVEERNLVSVGYKNVIGARRASWRILSSIE 68 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~--Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e 68 (253)
+.+..+|...-+.|+|++++..+++++...|. ...+-...+..+|-. .+....|...+....
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHH
Confidence 45667888899999999999999999987654 334445555555532 455566666665443
No 152
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=43.04 E-value=39 Score=28.23 Aligned_cols=48 Identities=19% Similarity=0.101 Sum_probs=28.0
Q ss_pred HHHHHHHHHhc--cCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 152 AYEAATAAAAS--ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 152 aY~~A~~~a~~--~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
-|++|....+. .+.|.+ .....+.+..|+ -+|+.++|+...++|+.-.
T Consensus 53 ~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~ 102 (281)
T 2c2l_A 53 QPEQALADCRRALELDGQS---VKAHFFLGQCQL-EMESYDEAIANLQRAYSLA 102 (281)
T ss_dssp CHHHHHHHHHHHTTSCTTC---HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhC
Confidence 45556555543 244444 344455555544 4788888888877777654
No 153
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=42.28 E-value=65 Score=25.38 Aligned_cols=16 Identities=6% Similarity=-0.191 Sum_probs=10.2
Q ss_pred hCChHHHHHHHHHHHH
Q 025437 186 LNSPERACHLAKQAFD 201 (253)
Q Consensus 186 ~~~~~~A~~iak~afd 201 (253)
+|+.++|+...++++.
T Consensus 124 ~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 124 GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHH
Confidence 5666666666666554
No 154
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=42.05 E-value=33 Score=27.42 Aligned_cols=94 Identities=19% Similarity=0.300 Sum_probs=51.2
Q ss_pred cccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCc---chhhhhhhhHHHH----HHHhCChHHHHHHHHHH
Q 025437 127 GDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHP---IRLGLALNFSVFY----YEILNSPERACHLAKQA 199 (253)
Q Consensus 127 gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---irLgL~LN~SVF~----yei~~~~~~A~~iak~a 199 (253)
|.-+.=+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---|+ -+-.|+.++|+..
T Consensus 43 G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~---- 113 (158)
T 1zu2_A 43 GGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQF---- 113 (158)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH----
T ss_pred HHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHH----
Confidence 555555555666666666788999999999866 34443 2345444321111 1112466666664
Q ss_pred HHHHHHhhccCCccchhhHHHHHHHHHhhHhhhcc
Q 025437 200 FDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTS 234 (253)
Q Consensus 200 fd~Ai~~ld~l~ee~y~ds~~ilqLLrdNl~~W~~ 234 (253)
|+.|+.. +. +...| ..-+++..++-.+|..
T Consensus 114 ~~kAl~l-~P-~~~~y---~~al~~~~ka~el~~~ 143 (158)
T 1zu2_A 114 FQQAVDE-QP-DNTHY---LKSLEMTAKAPQLHAE 143 (158)
T ss_dssp HHHHHHH-CT-TCHHH---HHHHHHHHTHHHHHHH
T ss_pred HHHHHHh-CC-CCHHH---HHHHHHHHhCHhccCc
Confidence 4444422 21 12234 4446666777777753
No 155
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=42.05 E-value=1.2e+02 Score=23.56 Aligned_cols=27 Identities=19% Similarity=0.171 Sum_probs=23.9
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 025437 11 LARLAEQAERYDEMVEAMKKVAKLDVE 37 (253)
Q Consensus 11 ~Aklaeq~ery~Dm~~~mk~~~~~~~~ 37 (253)
++.+..+.|+|++++.+++++++.+|.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~ 86 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN 86 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC
Confidence 788888899999999999999987765
No 156
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=41.58 E-value=62 Score=26.63 Aligned_cols=72 Identities=15% Similarity=0.159 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025437 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEH 108 (253)
Q Consensus 36 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~ 108 (253)
|+||.|-|.=|..-.|...-.-|-+.|.+..--.+.- +.-.+...+-++-.++.++++..+.+..+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKV-KALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAA 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999888888888887743111000 00000000123344556666666666666666654
No 157
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=41.10 E-value=95 Score=25.49 Aligned_cols=71 Identities=14% Similarity=0.124 Sum_probs=45.6
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025437 35 DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (253)
Q Consensus 35 ~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~L 109 (253)
-|+||.|-|.=|..-.|...-.-|-|.|.+..--.+.-.+.. +.-++-.++.++++..+.+..+.-||..+
T Consensus 104 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~----kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 104 LPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE----GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST----TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 388999999999999999888888888887431111100100 02234455666777777777776666543
No 158
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=40.98 E-value=42 Score=25.11 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=27.9
Q ss_pred cCHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHhhhh
Q 025437 19 ERYDEMVEAMKKVAKLD-VELTVEERNLVSVGYKNVI 54 (253)
Q Consensus 19 ery~Dm~~~mk~~~~~~-~~Ls~eERnLlsvayKn~i 54 (253)
++|+.++..++.+...+ ..++.+++-.|-.-||...
T Consensus 10 ~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt 46 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQAT 46 (106)
T ss_dssp HHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhc
Confidence 56888888888765433 3689999999988899764
No 159
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=40.54 E-value=18 Score=26.63 Aligned_cols=60 Identities=17% Similarity=0.287 Sum_probs=38.7
Q ss_pred CchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchhh----hhhhhHHHH
Q 025437 116 GESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLG----LALNFSVFY 182 (253)
Q Consensus 116 ~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLg----L~LN~SVF~ 182 (253)
+.+.+|+ .|+.--|+-.+...=+ .-+..+.+..+.|++--+ ..|.||..|+ +.-+|++|+
T Consensus 4 ~~~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L~--~~psNPa~LAe~Qa~lseynl~R 67 (92)
T 2g0u_A 4 PPTPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANLT--KNPSDPTALANYQMIMSEYNLYR 67 (92)
T ss_dssp CCCCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHHH--HSTTCHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence 3456676 3555557766653321 224566677777775543 6899999998 667787765
No 160
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=40.13 E-value=62 Score=26.64 Aligned_cols=73 Identities=18% Similarity=0.204 Sum_probs=44.4
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025437 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (253)
Q Consensus 36 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~L 109 (253)
|+||.|-|.=|..-.|...-.-|-+.|.+..--.+. -+.-.+...+-++-.++.++++..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~-lKk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDK-LKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999988888888888774311100 0000000011234445666677777666666666543
No 161
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=39.72 E-value=94 Score=21.66 Aligned_cols=65 Identities=14% Similarity=0.060 Sum_probs=47.9
Q ss_pred CcccHhhHHHHHHHHHHhcCHHHHHHHHHHHHhcC-----CCCC-HHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 025437 1 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLD-----VELT-VEERNLVSVGYKNVIGARRASWRILSS 66 (253)
Q Consensus 1 m~~~re~~~~~Aklaeq~ery~Dm~~~mk~~~~~~-----~~Ls-~eERnLlsvayKn~i~~~R~s~R~l~~ 66 (253)
|+|+-+++..+++.+-+-+.|+.++..+++.+... +..+ .+=...|..+|-. .|....|+..+..
T Consensus 1 ~~Lsa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~ 71 (104)
T 2v5f_A 1 MFLTAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKK 71 (104)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHH
Confidence 77888999999999999999999999999988641 1233 4445677777764 4556677776654
No 162
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=39.66 E-value=66 Score=26.46 Aligned_cols=68 Identities=16% Similarity=0.126 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhh----hhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025437 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEH 108 (253)
Q Consensus 36 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~----~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~ 108 (253)
|+||.|-|.=|..-.|...-.-|-+.|.+..--. +....+ .+-++-.++.++++..+.+..+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEV 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999888888888887743111 100000 0113344556666666666666666654
No 163
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=39.30 E-value=84 Score=21.02 Aligned_cols=46 Identities=17% Similarity=0.232 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++++.. .|.+| ....+.+..+ .-.|+.++|+....+++.
T Consensus 52 ~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~-~~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 52 DEAIEYYQKALEL-----DPRSA---EAWYNLGNAY-YKQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHH-HTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCch---HHHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 4677778877654 23333 2333444444 347888888888777665
No 164
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=38.76 E-value=73 Score=23.95 Aligned_cols=32 Identities=22% Similarity=0.198 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVEL 38 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~L 38 (253)
-+..++.+..+.|+|++++.++.+++..+|..
T Consensus 110 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 110 LACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 34566777777788888888887777766654
No 165
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=38.45 E-value=71 Score=26.28 Aligned_cols=68 Identities=22% Similarity=0.199 Sum_probs=41.9
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhh----hhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025437 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEH 108 (253)
Q Consensus 36 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~----~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~ 108 (253)
|+||.|-|.=|..-.|...-.-|-+.|.+..--. +....+ .+-++-.++.++++..+.+..+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDEL 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999989888888888887742111 100000 0113344555666666666666666553
No 166
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=38.38 E-value=76 Score=20.20 Aligned_cols=58 Identities=19% Similarity=0.177 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 66 (253)
-+..++.+..+.|+|++++.++++.+...|.- ..=...+..+|-. .+....|...+..
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~ 68 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAWYNLGNAYYK-QGDYDEAIEYYQK 68 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 34567888889999999999999999876653 4444455555543 4555666666644
No 167
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=38.24 E-value=1.1e+02 Score=21.79 Aligned_cols=58 Identities=12% Similarity=0.002 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 65 (253)
.....++...-+.|+|++++..+++++..+|. +.+=...+..+|-. .+....|...+.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~-~g~~~~A~~~~~ 75 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAE-NEKDGLAIIALN 75 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 45677888888999999999999999987775 45556666766653 344555555553
No 168
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=38.17 E-value=60 Score=24.75 Aligned_cols=55 Identities=13% Similarity=0.044 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHhccC--------CCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASEL--------PPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L--------~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
.+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++|+.
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALATS 149 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 3578899999987542110 00334445666777777666 7999999887766653
No 169
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=37.89 E-value=52 Score=21.83 Aligned_cols=29 Identities=3% Similarity=0.053 Sum_probs=21.6
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 025437 9 VYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (253)
Q Consensus 9 ~~~Aklaeq~ery~Dm~~~mk~~~~~~~~ 37 (253)
+.+|...-+.|+|++++..++++++.+|.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 32 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPV 32 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 55677777788888888888888776554
No 170
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=37.69 E-value=1.3e+02 Score=22.56 Aligned_cols=164 Identities=9% Similarity=-0.048 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCch-hHHHHHHH
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNE-QNVKRIKE 85 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~-~~~~~i~~ 85 (253)
-+..++.+....|+|++++.++.+++...|. +..-...+..+|-...+....+...+............. .......-
T Consensus 44 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~ 122 (225)
T 2vq2_A 44 AWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGIC 122 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHH
Confidence 3556788888999999999999999987665 344445555555443255666666665443311000000 01111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccC
Q 025437 86 YRQ-RVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASEL 164 (253)
Q Consensus 86 yk~-ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L 164 (253)
|.. .=-++-...+..++.+ -|. + ...+...|..|.-. |+ .+.|...|++++...
T Consensus 123 ~~~~~~~~~A~~~~~~~~~~-----~~~--~----~~~~~~la~~~~~~-----~~-----~~~A~~~~~~~~~~~---- 177 (225)
T 2vq2_A 123 SAKQGQFGLAEAYLKRSLAA-----QPQ--F----PPAFKELARTKMLA-----GQ-----LGDADYYFKKYQSRV---- 177 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----STT--C----HHHHHHHHHHHHHH-----TC-----HHHHHHHHHHHHHHH----
T ss_pred HHHcCCHHHHHHHHHHHHHh-----CCC--C----chHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHhC----
Confidence 110 0011222233333322 122 1 11112223333221 11 356888888888653
Q ss_pred CC-CCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 165 PP-THPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 165 ~p-t~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
| .+|.. ++....+|...|+.+.|....+.+..
T Consensus 178 -~~~~~~~----~~~~~~~~~~~~~~~~a~~~~~~~~~ 210 (225)
T 2vq2_A 178 -EVLQADD----LLLGWKIAKALGNAQAAYEYEAQLQA 210 (225)
T ss_dssp -CSCCHHH----HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -CCCCHHH----HHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 3 44443 34445566778999998877766543
No 171
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=37.67 E-value=1e+02 Score=24.23 Aligned_cols=49 Identities=16% Similarity=0.160 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++++. ..|.+|..-...++.+..|+. .|+.++|+...++++.
T Consensus 21 ~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 21 RQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 467777777764 356677655555555555554 7999999987777664
No 172
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=36.89 E-value=1.2e+02 Score=22.13 Aligned_cols=70 Identities=6% Similarity=-0.092 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLR 226 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqLLr 226 (253)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.+.-......+..+.
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 4688888888866 34443 445555555555 79999998887776654 2222223444455555
Q ss_pred hhHhhhc
Q 025437 227 DNLTLWT 233 (253)
Q Consensus 227 dNl~~W~ 233 (253)
.-+..+.
T Consensus 143 ~~~~~~~ 149 (162)
T 3rkv_A 143 ERRAEKK 149 (162)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5544443
No 173
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=36.42 E-value=50 Score=22.07 Aligned_cols=31 Identities=13% Similarity=0.075 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~ 36 (253)
+.+..++.+....|+|++++.++.+++...|
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 35 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQP 35 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 3455566666667777777777777665544
No 174
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=36.36 E-value=1.3e+02 Score=22.31 Aligned_cols=56 Identities=13% Similarity=-0.078 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~Ai 204 (253)
.+.|...|++|+.++.. . .+|...+.++..-...|.-.|++++|+...++|++-+-
T Consensus 123 ~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 123 LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 35789999999999854 2 34555565555555566668999999988888777653
No 175
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=35.34 E-value=77 Score=24.61 Aligned_cols=46 Identities=7% Similarity=0.029 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+. +.| -......+.+..|+. +|+.++|+...++++.
T Consensus 59 ~~A~~~~~~al~-----~~p---~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 104 (228)
T 4i17_A 59 KEAADYFDIAIK-----KNY---NLANAYIGKSAAYRD-MKNNQEYIATLTEGIK 104 (228)
T ss_dssp HHHHHHHHHHHH-----TTC---SHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCc---chHHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 568888998874 333 344556666666655 7999999998888765
No 176
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=34.94 E-value=1.3e+02 Score=21.85 Aligned_cols=68 Identities=15% Similarity=0.129 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHh---CChHHHHHHHHHHHHHHHHhhccC---CccchhhHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEIL---NSPERACHLAKQAFDEAIAELDSL---NEESYKDSTL 220 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~---~~~~~A~~iak~afd~Ai~~ld~l---~ee~y~ds~~ 220 (253)
..-..+|++|+..... +|+. |=. |+++.|+++-++.+.+-...+.-- .-++|..+..
T Consensus 7 ~~ik~~h~~AF~~Is~------------aL~~-----DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~ 69 (89)
T 3eab_A 7 ERVRVFHKQAFEYISI------------ALRI-----DEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARR 69 (89)
T ss_dssp HHHHHHHHHHHHHHHH------------HHHH-----HHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH------------HHHh-----hhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHH
Confidence 3456788888877654 4432 445 999999999998887766555421 3356899999
Q ss_pred HHHHHHhhHhh
Q 025437 221 IMQLLRDNLTL 231 (253)
Q Consensus 221 ilqLLrdNl~~ 231 (253)
+-+-|+.||..
T Consensus 70 LQ~KM~~nL~~ 80 (89)
T 3eab_A 70 LQAKMMTNLVM 80 (89)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999975
No 177
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=34.24 E-value=82 Score=23.36 Aligned_cols=48 Identities=17% Similarity=0.170 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCCh--HHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSP--ERACHLAKQAFDE 202 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~--~~A~~iak~afd~ 202 (253)
+.|..+|++|+.+. |.+| ....+++..+|.-.|+. ++|+...++++..
T Consensus 61 ~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 61 SNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 57899999998764 3343 34566677756667888 9998888777653
No 178
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=32.10 E-value=1.2e+02 Score=23.16 Aligned_cols=58 Identities=19% Similarity=0.206 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 66 (253)
-+..+|.+..+.|+|++++.++.+++...|. +..=...+..+|- ..+....|...+..
T Consensus 90 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~-~~~~~~~A~~~~~~ 147 (198)
T 2fbn_A 90 CNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANM-YFGFLEEAKENLYK 147 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHH-HHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHH-HcccHHHHHHHHHH
Confidence 4556888888999999999999999987664 3444555666663 34556666666654
No 179
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=31.51 E-value=85 Score=30.81 Aligned_cols=47 Identities=15% Similarity=0.159 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
.+.|.++|++|+++ .|.+ .....|.+..|++ +|+.++|+...++|+.
T Consensus 93 ~~~A~~~~~kAl~l-----~P~~---~~a~~~Lg~~~~~-~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 93 VQGALQCYTRAIQI-----NPAF---ADAHSNLASIHKD-SGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35799999999876 3344 3455677776666 7999999998888865
No 180
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=31.18 E-value=1.5e+02 Score=21.41 Aligned_cols=80 Identities=8% Similarity=0.113 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhh--hhhCchhHHHHHHHHHHHHHHHHHHHH
Q 025437 21 YDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKE--EAKGNEQNVKRIKEYRQRVEDELAKIC 98 (253)
Q Consensus 21 y~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~--~~~~~~~~~~~i~~yk~ki~~EL~~~C 98 (253)
|.....-+...+..-+.++-++|+-.-......+..-..=++.+..--+.. +..........++.||..+..+|..--
T Consensus 10 f~~~~~~i~~~l~~~~~~~ge~Rk~~i~~ie~~ldEA~ell~qMelE~~~~~~p~~~R~~~~~klr~Yk~dl~~~lk~~l 89 (97)
T 3onj_A 10 FKTTLEQAKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQMDVEVNNSIGDASERATYKAKLREWKKTIQSDIKRPL 89 (97)
T ss_dssp HHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444678889998887777777666544433332111211 111112456788999988877666543
Q ss_pred HH
Q 025437 99 ND 100 (253)
Q Consensus 99 ~e 100 (253)
..
T Consensus 90 k~ 91 (97)
T 3onj_A 90 QS 91 (97)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 181
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=30.94 E-value=1.3e+02 Score=20.57 Aligned_cols=57 Identities=11% Similarity=-0.008 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHhhhhhhhhHHHHHHH
Q 025437 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELT--VEERNLVSVGYKNVIGARRASWRILS 65 (253)
Q Consensus 8 ~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls--~eERnLlsvayKn~i~~~R~s~R~l~ 65 (253)
+..+|....+.|+|++++..+++++...|.-. .+-...+..+|-. .+....|...+.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~ 63 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFR 63 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 34556666666666666666666665544322 2333344444322 233444444443
No 182
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=30.93 E-value=36 Score=28.27 Aligned_cols=37 Identities=24% Similarity=0.521 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 025437 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 202 (253)
-+.|.++|++|..-. -+ | .+++...+|+.|||.+||.
T Consensus 19 YE~A~~~Ye~a~~ng---~~---p--------------Q~~Kql~KA~NIAKse~dr 55 (199)
T 3ub0_A 19 YEKARADLEEAKKND---VS---P--------------QLLKQLTKACNIAKSEFER 55 (199)
T ss_dssp HHHHHHHHHHHHHTT---CC---H--------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC---CC---H--------------HHHHHHHHHHHHHHHHHhH
Confidence 457888888885322 22 2 2357788999999999984
No 183
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=29.64 E-value=84 Score=28.71 Aligned_cols=12 Identities=17% Similarity=-0.142 Sum_probs=4.7
Q ss_pred CChHHHHHHHHH
Q 025437 187 NSPERACHLAKQ 198 (253)
Q Consensus 187 ~~~~~A~~iak~ 198 (253)
|+.++|+...++
T Consensus 54 g~~~~A~~~~~~ 65 (477)
T 1wao_1 54 ECYGYALGDATR 65 (477)
T ss_dssp TCHHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 444444433333
No 184
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=29.57 E-value=43 Score=28.97 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCc--------------chhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHP--------------IRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~p--------------irLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
No 185
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=28.19 E-value=62 Score=26.16 Aligned_cols=50 Identities=20% Similarity=0.325 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCC----CcchhhhhhhhHHHHHHHhCChHHHHHHHHHH
Q 025437 144 EAADHSLKAYEAATAAAASELPPT----HPIRLGLALNFSVFYYEILNSPERACHLAKQA 199 (253)
Q Consensus 144 ~~~~~a~~aY~~A~~~a~~~L~pt----~pirLgL~LN~SVF~yei~~~~~~A~~iak~a 199 (253)
...++-.+.|++|.. .+||+ ..-+.-|-++|+.| .++ +|+++|.++=+.|
T Consensus 33 ~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~D~d~aR~vy~~a 86 (161)
T 4h7y_A 33 ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-QEPDDARDYFQMA 86 (161)
T ss_dssp HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-HCGGGCHHHHHHH
T ss_pred hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-cCHHHHHHHHHHH
Confidence 567788899998874 36664 34456688999998 465 8999888877776
No 186
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=27.89 E-value=1.4e+02 Score=28.59 Aligned_cols=54 Identities=17% Similarity=0.039 Sum_probs=36.9
Q ss_pred cccccCccchHHHHHHHHHHHHHHHHHHhccCCCC-CcchhhhhhhhHHHHHHHhCC
Q 025437 133 LAEFKGADDRKEAADHSLKAYEAATAAAASELPPT-HPIRLGLALNFSVFYYEILNS 188 (253)
Q Consensus 133 laE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt-~pirLgL~LN~SVF~yei~~~ 188 (253)
.||....+.-.+++++|.++|++|++..++ +..| +|--.-..||-| -.||.-||
T Consensus 435 k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~a-k~yE~aGD 489 (526)
T 2wb7_A 435 KAKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNAA-KKHEMAGD 489 (526)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHHH-HHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHh-hhhhhccH
Confidence 356666667778899999999999999975 5544 454444455543 34776554
No 187
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=27.57 E-value=1.6e+02 Score=24.32 Aligned_cols=32 Identities=22% Similarity=0.160 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 025437 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVEL 38 (253)
Q Consensus 7 ~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~L 38 (253)
-...+|.+..+.|||++++..+.+++..+|..
T Consensus 221 ~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 221 LATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 34567777778888888888888888776655
No 188
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=26.77 E-value=75 Score=28.22 Aligned_cols=62 Identities=15% Similarity=0.117 Sum_probs=43.6
Q ss_pred cccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcch-hhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 127 GDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIR-LGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 127 gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir-LgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
|-+|-.+-++.-|+. ++|...|++|+.+. |-. +..-.-|+-|+..-.++++.|....++|+.
T Consensus 206 G~lY~~vPp~~gGd~-----ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 206 TKFYAAAPESFGGGM-----EKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHSCTTTTCCH-----HHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCccCCCH-----HHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 555544445544543 57999999999884 432 556677777777767899998888777765
No 189
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=26.01 E-value=3.3e+02 Score=25.86 Aligned_cols=188 Identities=16% Similarity=0.229 Sum_probs=96.7
Q ss_pred cCHHHHHHHHHHHHhcCCCCCHH---HHHHHHHH---HhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHH
Q 025437 19 ERYDEMVEAMKKVAKLDVELTVE---ERNLVSVG---YKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVED 92 (253)
Q Consensus 19 ery~Dm~~~mk~~~~~~~~Ls~e---ERnLlsva---yKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~yk~ki~~ 92 (253)
++|..-++-+++++........+ |-.+|-.| |..++..-+..+..|..-.+++....+..-...++.||.++..
T Consensus 121 ~k~g~~l~~v~~~~~~~~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k~~a 200 (526)
T 3iyk_A 121 EKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKIDA 200 (526)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHH
Confidence 55666677777777544444444 44566655 5577777888888887666776655555566777888777542
Q ss_pred -------HHHHHHHHHH-HHHhhccCCCCCCCchhhhhheecccccccccc-cc-CccchHHH---HHHHHHHHHHHHHH
Q 025437 93 -------ELAKICNDIL-SVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAE-FK-GADDRKEA---ADHSLKAYEAATAA 159 (253)
Q Consensus 93 -------EL~~~C~eii-~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE-~~-~~~~~~~~---~~~a~~aY~~A~~~ 159 (253)
|=..+-.|.| +++| |-||.---.|| +. -|.--... ..-+...|+-.--+
T Consensus 201 L~~aIe~Er~~~~EEAIqe~~d------------------msaeI~E~AaeEVP~vGag~At~iATaRaieg~yKLkkvI 262 (526)
T 3iyk_A 201 LKNAIEVERDGMQEEAIQEIAG------------------MTADVLEAASEEVPLIGAGMATAVATGRAIEGAYKLKKVI 262 (526)
T ss_pred HHHHHHHHHhHHHHHHHHHHhc------------------chHHHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222221 1221 22333222222 11 12221111 12244555533222
Q ss_pred --------HhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHH--HHHHHHHHHhhccCCccchhhHHHHHHHHHh
Q 025437 160 --------AASELPPTHPIRLGLALNFSVFYYEILNSPERACHLA--KQAFDEAIAELDSLNEESYKDSTLIMQLLRD 227 (253)
Q Consensus 160 --------a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~ia--k~afd~Ai~~ld~l~ee~y~ds~~ilqLLrd 227 (253)
..-..|+.||--|..+|-. =+ .-.+|..-|.-+. ...+++--.+++.+.++..+.....++--+.
T Consensus 263 ~aLtGidlsHl~~P~I~p~~iet~L~~-~~--~~i~D~~L~~~v~sK~~~v~E~~~Ev~Hi~~~i~P~~kk~~~~~~~ 337 (526)
T 3iyk_A 263 NALSGIDLTHLRTPKIEPSVVSTILEY-RA--KEIPDNALAVSVLSKNRAIQENHKELMHIKNEILPRFKKAMDEEKE 337 (526)
T ss_pred HHHhCCCchhccCCCCCHHHHHHHHhC-CC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2225788999988888742 01 1123333333222 2445666666666666665555555544443
No 190
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=25.68 E-value=5.9e+02 Score=27.84 Aligned_cols=24 Identities=17% Similarity=0.131 Sum_probs=20.4
Q ss_pred hhHHHHHHHhCChHHHHHHHHHHH
Q 025437 177 NFSVFYYEILNSPERACHLAKQAF 200 (253)
Q Consensus 177 N~SVF~yei~~~~~~A~~iak~af 200 (253)
.-.|-+|+-.|..++|+.+..+|+
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHh
Confidence 355778899999999999999983
No 191
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=24.24 E-value=96 Score=25.70 Aligned_cols=31 Identities=6% Similarity=-0.004 Sum_probs=22.2
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~ 36 (253)
+.+..+|.+..+.|+|++++.++.+++..+|
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNP 35 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3455677777778888888888877776544
No 192
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=24.20 E-value=4.6e+02 Score=24.80 Aligned_cols=125 Identities=8% Similarity=-0.025 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHHH
Q 025437 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYR 87 (253)
Q Consensus 8 ~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~yk 87 (253)
+..+|.+..+.|+|++++..+.++++.+|. +.+-...+..+|- ..+..-.|...+...-+..+.. ......+-.-|.
T Consensus 436 ~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~-~~~~~~lg~~~~ 512 (681)
T 2pzi_A 436 PLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRAVAEL-LTGDYDSATKHFTEVLDTFPGE-LAPKLALAATAE 512 (681)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTC-SHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhhhheeccccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCC
Q 025437 88 QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPT 167 (253)
Q Consensus 88 ~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt 167 (253)
+. |+| +. ...|++|+++
T Consensus 513 ~~-------------------------------------g~~-----------------~~-~~~~~~al~~-------- 529 (681)
T 2pzi_A 513 LA-------------------------------------GNT-----------------DE-HKFYQTVWST-------- 529 (681)
T ss_dssp HH-------------------------------------TCC-----------------CT-TCHHHHHHHH--------
T ss_pred Hc-------------------------------------CCh-----------------HH-HHHHHHHHHh--------
Q ss_pred CcchhhhhhhhHHHHHHHhCChHHHHHHHHHH
Q 025437 168 HPIRLGLALNFSVFYYEILNSPERACHLAKQA 199 (253)
Q Consensus 168 ~pirLgL~LN~SVF~yei~~~~~~A~~iak~a 199 (253)
+|-......|.+..+.. +|+.++|+...++|
T Consensus 530 ~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~~a 560 (681)
T 2pzi_A 530 NDGVISAAFGLARARSA-EGDRVGAVRTLDEV 560 (681)
T ss_dssp CTTCHHHHHHHHHHHHH-TTCHHHHHHHHHTS
T ss_pred CCchHHHHHHHHHHHHH-cCCHHHHHHHHHhh
No 193
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=23.49 E-value=1.7e+02 Score=26.30 Aligned_cols=20 Identities=10% Similarity=0.059 Sum_probs=11.4
Q ss_pred HHHHhCChHHHHHHHHHHHH
Q 025437 182 YYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 182 ~yei~~~~~~A~~iak~afd 201 (253)
.|...|++++|+.+-.+|+.
T Consensus 400 ~~~~~~~~~~A~~~~e~al~ 419 (530)
T 2ooe_A 400 EYYCSKDKSVAFKIFELGLK 419 (530)
T ss_dssp HHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHHHHHH
Confidence 34456666666666555543
No 194
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=22.83 E-value=27 Score=33.05 Aligned_cols=25 Identities=24% Similarity=0.305 Sum_probs=20.8
Q ss_pred ccccccccccccCccchHHHHHHHHHHHHHHHHHH
Q 025437 126 KGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAA 160 (253)
Q Consensus 126 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 160 (253)
-||..||...+ ..|...|.+|..+.
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~ 182 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLV 182 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHC
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhC
Confidence 59999999764 57999999998764
No 195
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=22.81 E-value=1.9e+02 Score=24.02 Aligned_cols=46 Identities=11% Similarity=-0.023 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 201 (253)
+.|...|+++++. .|.+| .+..|.++.+ .-+|+.++|...-++|+.
T Consensus 183 ~eA~~~~~~~l~~-----~p~~~---~~~~~la~~~-~~~g~~~eA~~~l~~al~ 228 (291)
T 3mkr_A 183 QDAYYIFQEMADK-----CSPTL---LLLNGQAACH-MAQGRWEAAEGVLQEALD 228 (291)
T ss_dssp HHHHHHHHHHHHH-----SCCCH---HHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHH-HHcCCHHHHHHHHHHHHH
Confidence 4455556555543 33333 3444455544 447999998888777765
No 196
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=22.80 E-value=1.5e+02 Score=24.85 Aligned_cols=16 Identities=19% Similarity=0.183 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHh
Q 025437 146 ADHSLKAYEAATAAAA 161 (253)
Q Consensus 146 ~~~a~~aY~~A~~~a~ 161 (253)
++.|...|..++..+.
T Consensus 188 ~~~a~~~Y~~~v~~~n 203 (305)
T 2efl_A 188 AEDSKADYSSILQKFN 203 (305)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4567778888877764
No 197
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=22.39 E-value=1.2e+02 Score=22.18 Aligned_cols=35 Identities=14% Similarity=0.235 Sum_probs=28.7
Q ss_pred hcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhh
Q 025437 18 AERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVI 54 (253)
Q Consensus 18 ~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i 54 (253)
+.+|+.+++.++.+.. ..++.+++-.|-.-||...
T Consensus 11 ~~~F~~A~~~vk~l~~--~~ps~~~~L~LYaLyKQAt 45 (96)
T 2lbb_A 11 ADDFDAAVKYVSNTTT--MMASNDDKLCFYKYYKQAT 45 (96)
T ss_dssp SSTHHHHHHHHHHCCC--SCCCTTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCC--CCCCHHHHHHHHHHHHHHh
Confidence 5789999999987542 5789999998888899764
No 198
>3cjl_A Domain of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Pectobacterium atrosepticum SCRI1043}
Probab=22.20 E-value=50 Score=24.05 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=28.1
Q ss_pred hcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Q 025437 18 AERYDEMVEAMKKVAKLDVELTVEERNLVSVGYK 51 (253)
Q Consensus 18 ~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayK 51 (253)
++.+||++..+.++ .....|+.++..-|.|+.|
T Consensus 24 ~~nhDDi~~Ive~~-~~~~~~~~~~a~af~vGLK 56 (88)
T 3cjl_A 24 FSLHDDLFKLLEKV-DGKMDMTPEQTQAFMVGLK 56 (88)
T ss_dssp EEESSCHHHHHHHH-TTTSSSCHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHh-hccCCCCHHHHHHHHHHHH
Confidence 46789999999887 6678899999999999877
No 199
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=21.92 E-value=1.7e+02 Score=25.26 Aligned_cols=77 Identities=9% Similarity=0.136 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh-----hhhhhhhHHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHH
Q 025437 20 RYDEMVEAMKKVAKLDVELTVEERNLVSVGYK-----NVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDEL 94 (253)
Q Consensus 20 ry~Dm~~~mk~~~~~~~~Ls~eERnLlsvayK-----n~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i~~yk~ki~~EL 94 (253)
--+|+..|+++-+....+....=+.|-..... .-.|+.+.+|..+...-.... ..+......+...|...|
T Consensus 35 ~~~el~~f~keRa~iE~eYak~L~kLakk~~~~~~~~~~~gtl~~aw~~~~~e~e~~a----~~H~~~a~~L~~~v~~~l 110 (337)
T 2x3v_A 35 LCNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSLERAWGAMMTEADKVS----ELHQEVKNSLLNEDLEKV 110 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 34567777776554433333333333332222 235778899998864222221 123444445555555555
Q ss_pred HHHHHH
Q 025437 95 AKICND 100 (253)
Q Consensus 95 ~~~C~e 100 (253)
..++.+
T Consensus 111 ~~~~~e 116 (337)
T 2x3v_A 111 KNWQKD 116 (337)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 200
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=21.73 E-value=2.2e+02 Score=20.17 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=27.1
Q ss_pred cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhh
Q 025437 19 ERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVI 54 (253)
Q Consensus 19 ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvayKn~i 54 (253)
++|+.++.+++.+.. ...++.+++-.|=.-||-..
T Consensus 4 ~~F~~A~~~v~~l~~-~~~~~~~~~L~LYalyKQAt 38 (89)
T 1hbk_A 4 QVFEECVSFINGLPR-TINLPNELKLDLYKYYKQST 38 (89)
T ss_dssp HHHHHHHHHHHHSCT-TCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-cCCCCHHHHHHHHHHHHHhh
Confidence 467888888887543 36789999998888888664
No 201
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.72 E-value=3.7e+02 Score=22.73 Aligned_cols=54 Identities=17% Similarity=0.062 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 025437 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (253)
Q Consensus 147 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~A 203 (253)
..|...|+++...... ...+|..+.+.++-+-.|+. +|+.++|..+-++|..-+
T Consensus 152 ~~A~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 152 KDSLALINDLLREFKK--LDDKPSLVDVHLLESKVYHK-LRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHHHTT--SSCSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--cccchhHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHh
Confidence 5688888888877643 34467777777777777666 799999998887776543
No 202
>1m1e_B ICAT; cell adhesion, cytoskeleton, armadillo repeats, transciption factor, structural protein; 2.10A {Homo sapiens} SCOP: a.161.1.1 PDB: 1luj_B 1t08_B
Probab=21.48 E-value=89 Score=22.37 Aligned_cols=25 Identities=20% Similarity=0.291 Sum_probs=19.3
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHH
Q 025437 25 VEAMKKVAKLDVELTVEERNLVSVG 49 (253)
Q Consensus 25 ~~~mk~~~~~~~~Ls~eERnLlsva 49 (253)
++++-.+-..+..||+||..+|+.-
T Consensus 20 vEILtALkKLGe~Ls~eE~~FL~~~ 44 (81)
T 1m1e_B 20 VRVLLMLRKMGSNLTASEEEFLRTY 44 (81)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHhcccCCHHHHHHHHHH
Confidence 4555555567999999999999753
No 203
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=21.32 E-value=1.9e+02 Score=26.42 Aligned_cols=20 Identities=0% Similarity=-0.022 Sum_probs=0.4
Q ss_pred hcCHHHHHHHHHHHHhcCCC
Q 025437 18 AERYDEMVEAMKKVAKLDVE 37 (253)
Q Consensus 18 ~ery~Dm~~~mk~~~~~~~~ 37 (253)
.|++++++.+++++++.+|.
T Consensus 2 ~g~~~~A~~~~~~al~~~p~ 21 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQ 21 (568)
T ss_dssp -------------------C
T ss_pred CccHHHHHHHHHHHHHhCCC
Confidence 46788888888887765543
No 204
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=20.59 E-value=2.8e+02 Score=21.01 Aligned_cols=36 Identities=19% Similarity=0.183 Sum_probs=29.5
Q ss_pred cCHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHhhhh
Q 025437 19 ERYDEMVEAMKKVAKLDV-ELTVEERNLVSVGYKNVI 54 (253)
Q Consensus 19 ery~Dm~~~mk~~~~~~~-~Ls~eERnLlsvayKn~i 54 (253)
++|+.++.+++.+-..++ .++.+++-.|=.-||...
T Consensus 26 ~~F~~A~~~Vk~l~~~g~~~ps~d~~L~LYaLyKQAT 62 (119)
T 3flv_A 26 TRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQAT 62 (119)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccCCCCCCHHHHHHHHHHHHHHh
Confidence 578999999999876554 689999998888888665
No 205
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=20.07 E-value=2.2e+02 Score=19.50 Aligned_cols=44 Identities=7% Similarity=-0.039 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 025437 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGY 50 (253)
Q Consensus 6 e~~~~~Aklaeq~ery~Dm~~~mk~~~~~~~~Ls~eERnLlsvay 50 (253)
+.+..++.+....|+|++++.++++++..+|. +..=...+..+|
T Consensus 10 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~ 53 (137)
T 3q49_B 10 QELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCY 53 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHH
Confidence 34455666666667777777777766665544 233334444443
Done!