Query 025441
Match_columns 252
No_of_seqs 197 out of 1666
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 10:22:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025441.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025441hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2e_A Peroxiredoxin; redox pr 100.0 3.5E-32 1.2E-36 222.8 13.5 153 68-252 3-155 (157)
2 4gqc_A Thiol peroxidase, perox 100.0 9.7E-33 3.3E-37 228.2 7.2 151 69-251 5-156 (164)
3 3mng_A Peroxiredoxin-5, mitoch 100.0 9.1E-29 3.1E-33 207.1 16.2 154 67-250 13-173 (173)
4 3uma_A Hypothetical peroxiredo 100.0 3.6E-28 1.2E-32 205.3 15.5 152 67-250 24-184 (184)
5 3p7x_A Probable thiol peroxida 99.9 1.3E-26 4.4E-31 190.1 17.3 145 68-252 19-165 (166)
6 1tp9_A Peroxiredoxin, PRX D (t 99.9 1.3E-26 4.5E-31 190.0 16.2 149 69-250 4-162 (162)
7 1psq_A Probable thiol peroxida 99.9 5.7E-26 2E-30 185.7 16.8 145 68-251 15-161 (163)
8 3gkn_A Bacterioferritin comigr 99.9 5E-26 1.7E-30 184.9 16.2 155 64-251 2-158 (163)
9 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 8E-26 2.7E-30 187.5 17.5 150 69-250 3-159 (167)
10 2pwj_A Mitochondrial peroxired 99.9 3.9E-26 1.3E-30 189.7 14.9 150 69-250 7-171 (171)
11 2yzh_A Probable thiol peroxida 99.9 6E-26 2.1E-30 186.8 15.9 147 68-251 20-168 (171)
12 3tue_A Tryparedoxin peroxidase 99.9 2.7E-26 9.2E-31 199.4 14.1 146 68-251 25-181 (219)
13 3sbc_A Peroxiredoxin TSA1; alp 99.9 4.1E-26 1.4E-30 197.9 14.6 145 69-251 23-177 (216)
14 3zrd_A Thiol peroxidase; oxido 99.9 4.6E-26 1.6E-30 194.0 14.5 148 68-251 51-200 (200)
15 3ixr_A Bacterioferritin comigr 99.9 3.3E-26 1.1E-30 190.7 13.2 152 67-251 19-174 (179)
16 1q98_A Thiol peroxidase, TPX; 99.9 5.2E-26 1.8E-30 186.6 14.1 147 69-251 17-165 (165)
17 3drn_A Peroxiredoxin, bacterio 99.9 3E-25 1E-29 180.9 17.1 143 69-251 2-145 (161)
18 1xiy_A Peroxiredoxin, pfaop; a 99.9 1.7E-25 5.9E-30 189.1 15.5 151 70-252 2-179 (182)
19 4f82_A Thioredoxin reductase; 99.9 1.9E-25 6.5E-30 188.1 15.0 152 69-252 10-176 (176)
20 3keb_A Probable thiol peroxida 99.9 3.2E-25 1.1E-29 193.3 16.7 145 68-251 21-172 (224)
21 2xhf_A Peroxiredoxin 5; oxidor 99.9 7E-26 2.4E-30 189.9 11.0 152 68-251 13-170 (171)
22 1prx_A HORF6; peroxiredoxin, h 99.9 8.2E-25 2.8E-29 189.8 16.7 151 69-251 5-165 (224)
23 1nm3_A Protein HI0572; hybrid, 99.9 9.2E-25 3.1E-29 189.6 16.1 151 69-251 3-163 (241)
24 1xvw_A Hypothetical protein RV 99.9 2.1E-24 7.2E-29 174.4 17.0 146 69-251 9-156 (160)
25 2c0d_A Thioredoxin peroxidase 99.9 1.6E-24 5.3E-29 187.7 16.5 148 66-251 22-180 (221)
26 1n8j_A AHPC, alkyl hydroperoxi 99.9 1.7E-24 5.9E-29 181.6 15.2 144 70-251 2-152 (186)
27 2v2g_A Peroxiredoxin 6; oxidor 99.9 2E-24 6.9E-29 188.9 15.4 151 69-251 3-161 (233)
28 1xcc_A 1-Cys peroxiredoxin; un 99.9 2.5E-24 8.4E-29 186.3 14.5 151 69-251 3-162 (220)
29 2a4v_A Peroxiredoxin DOT5; yea 99.9 2.1E-24 7E-29 175.3 11.6 132 68-237 6-138 (159)
30 2i81_A 2-Cys peroxiredoxin; st 99.9 1.3E-23 4.5E-28 180.4 16.8 146 68-251 20-176 (213)
31 2pn8_A Peroxiredoxin-4; thiore 99.9 9.3E-24 3.2E-28 181.1 15.1 146 68-251 18-173 (211)
32 1xvq_A Thiol peroxidase; thior 99.9 9.5E-24 3.2E-28 174.8 14.2 146 68-251 17-164 (175)
33 2jsy_A Probable thiol peroxida 99.9 4.9E-24 1.7E-28 173.9 11.4 144 68-251 17-163 (167)
34 3tjj_A Peroxiredoxin-4; thiore 99.9 1.5E-23 5.2E-28 185.4 15.0 147 67-251 60-216 (254)
35 2h01_A 2-Cys peroxiredoxin; th 99.9 1.3E-23 4.5E-28 176.0 13.8 144 70-251 1-155 (192)
36 3qpm_A Peroxiredoxin; oxidored 99.9 3.2E-23 1.1E-27 181.5 16.4 146 68-251 47-202 (240)
37 1we0_A Alkyl hydroperoxide red 99.9 3.4E-23 1.2E-27 172.6 15.7 144 70-251 2-153 (187)
38 1uul_A Tryparedoxin peroxidase 99.9 6.2E-23 2.1E-27 173.6 16.6 146 68-251 5-161 (202)
39 1qmv_A Human thioredoxin perox 99.9 5.3E-23 1.8E-27 173.2 15.9 146 68-251 4-159 (197)
40 4eo3_A Bacterioferritin comigr 99.9 1.9E-23 6.5E-28 190.7 14.1 134 73-251 2-135 (322)
41 2bmx_A Alkyl hydroperoxidase C 99.9 8.1E-23 2.8E-27 171.8 16.8 146 67-251 2-166 (195)
42 3a2v_A Probable peroxiredoxin; 99.9 4.6E-23 1.6E-27 182.2 14.8 146 69-251 5-158 (249)
43 1zye_A Thioredoxin-dependent p 99.9 9.5E-23 3.3E-27 175.7 16.3 146 68-251 26-181 (220)
44 3ztl_A Thioredoxin peroxidase; 99.9 1E-22 3.4E-27 175.6 16.1 145 68-251 39-194 (222)
45 1zof_A Alkyl hydroperoxide-red 99.9 1.4E-22 4.8E-27 170.5 15.1 144 70-251 2-157 (198)
46 3u5r_E Uncharacterized protein 99.9 2.6E-22 8.8E-27 172.3 14.9 124 68-234 31-162 (218)
47 3gl3_A Putative thiol:disulfid 99.9 1.1E-21 3.9E-26 156.3 16.5 137 69-250 3-140 (152)
48 3kcm_A Thioredoxin family prot 99.9 1.1E-21 3.7E-26 156.7 15.7 138 70-251 3-142 (154)
49 3ewl_A Uncharacterized conserv 99.9 2.4E-21 8.1E-26 153.0 16.9 130 70-251 2-137 (142)
50 1xzo_A BSSCO, hypothetical pro 99.9 1.7E-21 5.8E-26 158.8 15.3 153 68-251 6-168 (174)
51 2ywi_A Hypothetical conserved 99.9 4E-21 1.4E-25 160.0 16.3 140 68-250 17-169 (196)
52 1jfu_A Thiol:disulfide interch 99.9 3.2E-21 1.1E-25 159.5 15.0 143 68-250 33-178 (186)
53 3lwa_A Secreted thiol-disulfid 99.9 9.9E-21 3.4E-25 156.4 17.4 138 68-251 30-177 (183)
54 3hdc_A Thioredoxin family prot 99.9 2.9E-21 9.9E-26 156.1 13.5 141 63-249 9-149 (158)
55 3eur_A Uncharacterized protein 99.9 1.1E-20 3.9E-25 149.8 16.3 131 69-251 5-141 (142)
56 4fo5_A Thioredoxin-like protei 99.9 4E-21 1.4E-25 152.6 13.2 122 67-233 5-131 (143)
57 3fw2_A Thiol-disulfide oxidore 99.9 8.1E-21 2.8E-25 151.9 14.8 122 68-233 4-134 (150)
58 2obi_A PHGPX, GPX-4, phospholi 99.9 5.7E-21 1.9E-25 158.5 14.1 150 65-251 17-180 (183)
59 2lrn_A Thiol:disulfide interch 99.9 1.3E-20 4.5E-25 151.0 15.6 133 69-250 3-139 (152)
60 3eyt_A Uncharacterized protein 99.9 8.5E-21 2.9E-25 152.4 14.3 120 71-234 2-136 (158)
61 2f9s_A Thiol-disulfide oxidore 99.9 2.6E-20 8.8E-25 148.7 16.7 132 70-250 1-133 (151)
62 3hcz_A Possible thiol-disulfid 99.8 5.7E-21 1.9E-25 150.8 10.5 135 68-251 4-142 (148)
63 3lor_A Thiol-disulfide isomera 99.8 1.4E-20 4.8E-25 151.1 12.6 122 70-235 4-140 (160)
64 2l5o_A Putative thioredoxin; s 99.8 4.2E-20 1.4E-24 147.3 14.7 133 70-251 3-137 (153)
65 2p31_A CL683, glutathione pero 99.8 9.5E-21 3.2E-25 157.3 11.3 91 68-160 22-121 (181)
66 2gs3_A PHGPX, GPX-4, phospholi 99.8 2.5E-20 8.5E-25 155.3 13.7 93 66-160 20-120 (185)
67 2cvb_A Probable thiol-disulfid 99.8 6E-20 2.1E-24 152.3 15.8 102 68-172 6-115 (188)
68 2lrt_A Uncharacterized protein 99.8 6.8E-20 2.3E-24 147.9 15.4 131 69-250 9-143 (152)
69 3me7_A Putative uncharacterize 99.8 4.7E-20 1.6E-24 152.2 14.6 143 70-251 2-158 (170)
70 3kh7_A Thiol:disulfide interch 99.8 1.4E-19 4.9E-24 149.7 17.0 122 66-235 27-152 (176)
71 3kij_A Probable glutathione pe 99.8 2.1E-20 7.2E-25 154.9 12.0 93 68-162 11-112 (180)
72 2v1m_A Glutathione peroxidase; 99.8 6.4E-20 2.2E-24 148.5 14.6 94 69-164 5-109 (169)
73 3fkf_A Thiol-disulfide oxidore 99.8 4.7E-20 1.6E-24 145.4 12.9 122 68-233 4-132 (148)
74 3erw_A Sporulation thiol-disul 99.8 2E-19 6.8E-24 141.1 16.1 133 68-250 8-144 (145)
75 3or5_A Thiol:disulfide interch 99.8 2.5E-19 8.5E-24 144.3 16.9 127 69-234 8-135 (165)
76 2p5q_A Glutathione peroxidase 99.8 1.1E-19 3.7E-24 147.3 13.5 94 69-164 6-110 (170)
77 3ia1_A THIO-disulfide isomeras 99.8 1.3E-19 4.4E-24 144.8 13.7 131 68-251 4-140 (154)
78 2k6v_A Putative cytochrome C o 99.8 3.5E-20 1.2E-24 150.5 10.3 149 69-251 10-169 (172)
79 2vup_A Glutathione peroxidase- 99.8 7.4E-20 2.5E-24 153.0 11.8 94 68-163 21-125 (190)
80 2i3y_A Epididymal secretory gl 99.8 2.4E-19 8.1E-24 154.8 15.2 89 71-162 31-134 (215)
81 2ggt_A SCO1 protein homolog, m 99.8 4E-19 1.4E-23 143.1 15.2 144 74-251 2-157 (164)
82 2r37_A Glutathione peroxidase 99.8 3.1E-19 1.1E-23 153.0 14.7 88 72-162 14-116 (207)
83 3raz_A Thioredoxin-related pro 99.8 2.3E-19 7.7E-24 143.6 12.5 118 74-234 4-124 (151)
84 2ls5_A Uncharacterized protein 99.7 1.8E-21 6.1E-26 157.0 0.0 139 68-251 6-147 (159)
85 2f8a_A Glutathione peroxidase 99.8 6.6E-19 2.3E-23 150.6 15.6 91 70-162 21-126 (208)
86 3dwv_A Glutathione peroxidase- 99.8 3.4E-20 1.1E-24 154.9 7.0 91 68-160 19-118 (187)
87 1lu4_A Soluble secreted antige 99.8 1.2E-18 4.1E-23 135.4 15.2 130 73-251 2-132 (136)
88 2b5x_A YKUV protein, TRXY; thi 99.8 5.3E-19 1.8E-23 139.1 13.0 121 70-235 2-130 (148)
89 3ha9_A Uncharacterized thiored 99.8 1.6E-19 5.5E-24 146.3 10.2 99 69-172 11-129 (165)
90 2rli_A SCO2 protein homolog, m 99.8 2.6E-18 9E-23 139.4 17.2 141 76-250 7-159 (171)
91 4evm_A Thioredoxin family prot 99.8 2.6E-18 8.7E-23 132.6 16.1 128 74-251 1-135 (138)
92 2lja_A Putative thiol-disulfid 99.8 6.5E-19 2.2E-23 140.2 12.3 136 69-250 3-141 (152)
93 3cmi_A Peroxiredoxin HYR1; thi 99.8 2.8E-19 9.7E-24 146.5 9.0 90 70-162 7-105 (171)
94 1zzo_A RV1677; thioredoxin fol 99.8 7.1E-18 2.4E-22 130.5 16.0 96 72-171 2-99 (136)
95 2b7k_A SCO1 protein; metalloch 99.8 1.8E-18 6.2E-23 146.2 13.5 138 69-234 13-163 (200)
96 2hyx_A Protein DIPZ; thioredox 99.8 3.7E-18 1.3E-22 157.6 15.4 123 68-234 50-183 (352)
97 2b1k_A Thiol:disulfide interch 99.8 1.6E-17 5.5E-22 134.8 17.0 121 67-234 20-144 (168)
98 1kng_A Thiol:disulfide interch 99.7 1.8E-17 6.1E-22 132.1 13.6 121 67-234 6-136 (156)
99 2h30_A Thioredoxin, peptide me 99.7 8.3E-18 2.9E-22 135.3 11.0 132 69-251 14-152 (164)
100 1i5g_A Tryparedoxin II; electr 99.7 7.8E-18 2.7E-22 133.4 10.2 120 71-234 3-128 (144)
101 4hde_A SCO1/SENC family lipopr 99.7 6E-17 2.1E-21 133.9 14.2 149 70-251 7-166 (170)
102 1o8x_A Tryparedoxin, TRYX, TXN 99.7 1.1E-17 3.9E-22 132.9 8.9 126 70-240 3-134 (146)
103 2lus_A Thioredoxion; CR-Trp16, 99.5 4.3E-18 1.5E-22 133.8 0.0 124 73-238 2-131 (143)
104 1o73_A Tryparedoxin; electron 99.7 1.5E-16 5.2E-21 125.5 9.0 98 70-170 3-105 (144)
105 3s9f_A Tryparedoxin; thioredox 99.6 1.1E-16 3.6E-21 131.2 6.0 98 70-170 23-125 (165)
106 4h86_A Peroxiredoxin type-2; o 99.4 4.5E-12 1.5E-16 108.1 14.8 148 69-250 26-199 (199)
107 2l57_A Uncharacterized protein 99.0 7.8E-10 2.7E-14 85.2 9.1 64 73-139 4-67 (126)
108 2ju5_A Thioredoxin disulfide i 98.9 5.2E-10 1.8E-14 90.2 4.5 67 69-141 24-94 (154)
109 3ul3_B Thioredoxin, thioredoxi 98.8 4.9E-08 1.7E-12 75.5 11.6 65 70-139 19-83 (128)
110 3fk8_A Disulphide isomerase; A 98.8 3.6E-08 1.2E-12 76.5 9.5 97 96-250 28-128 (133)
111 2fwh_A Thiol:disulfide interch 98.7 2.2E-09 7.5E-14 84.2 1.7 92 70-165 5-104 (134)
112 3hxs_A Thioredoxin, TRXP; elec 98.6 2.4E-08 8.1E-13 78.1 4.6 81 79-165 35-118 (141)
113 2pu9_C TRX-F, thioredoxin F-ty 98.6 3.4E-07 1.2E-11 68.5 10.0 41 97-139 24-64 (111)
114 1nsw_A Thioredoxin, TRX; therm 98.5 4.7E-07 1.6E-11 66.7 8.9 45 95-140 15-59 (105)
115 1faa_A Thioredoxin F; electron 98.5 6.2E-07 2.1E-11 68.4 9.6 41 97-139 37-77 (124)
116 2kuc_A Putative disulphide-iso 98.5 6.8E-07 2.3E-11 68.6 9.8 43 97-140 27-72 (130)
117 1t00_A Thioredoxin, TRX; redox 98.5 2.5E-06 8.5E-11 63.6 11.7 44 96-140 22-65 (112)
118 2voc_A Thioredoxin; electron t 98.5 1.5E-06 5.1E-11 65.4 10.6 44 96-140 16-59 (112)
119 1xfl_A Thioredoxin H1; AT3G510 98.5 1.4E-06 4.9E-11 67.2 10.6 42 96-139 37-78 (124)
120 1ep7_A Thioredoxin CH1, H-type 98.4 1.5E-06 5.3E-11 64.6 9.7 43 97-140 24-66 (112)
121 3p2a_A Thioredoxin 2, putative 98.4 7.6E-08 2.6E-12 76.2 2.5 71 70-143 30-100 (148)
122 1dby_A Chloroplast thioredoxin 98.4 3.9E-06 1.3E-10 61.9 11.4 44 96-140 18-61 (107)
123 2f51_A Thioredoxin; electron t 98.4 3.1E-08 1.1E-12 76.0 -0.6 77 80-161 5-85 (118)
124 2dml_A Protein disulfide-isome 98.4 6.7E-07 2.3E-11 68.6 6.9 68 96-164 34-101 (130)
125 2i4a_A Thioredoxin; acidophIle 98.4 4.5E-06 1.5E-10 61.2 10.9 44 96-140 19-62 (107)
126 2yzu_A Thioredoxin; redox prot 98.4 1.9E-06 6.4E-11 63.3 8.8 45 95-140 16-60 (109)
127 3d22_A TRXH4, thioredoxin H-ty 98.3 2.8E-06 9.4E-11 66.1 9.5 41 97-139 46-86 (139)
128 2e0q_A Thioredoxin; electron t 98.3 8E-06 2.7E-10 59.2 11.4 42 96-139 15-56 (104)
129 2vlu_A Thioredoxin, thioredoxi 98.3 3.1E-06 1.1E-10 64.1 9.5 68 71-140 8-75 (122)
130 2dj1_A Protein disulfide-isome 98.3 6.1E-07 2.1E-11 69.8 5.6 69 80-153 19-89 (140)
131 2trx_A Thioredoxin; electron t 98.3 6.4E-06 2.2E-10 60.7 10.9 44 95-139 18-61 (108)
132 1z6n_A Hypothetical protein PA 98.3 3E-07 1E-11 75.9 3.5 68 96-165 53-123 (167)
133 3tco_A Thioredoxin (TRXA-1); d 98.3 1.1E-05 3.9E-10 59.1 11.8 43 96-139 20-62 (109)
134 3f3q_A Thioredoxin-1; His TAG, 98.3 2E-07 6.7E-12 70.2 1.9 71 90-162 17-87 (109)
135 2o8v_B Thioredoxin 1; disulfid 98.3 3.9E-06 1.3E-10 65.1 9.0 45 95-140 38-82 (128)
136 2dj3_A Protein disulfide-isome 98.2 3.2E-07 1.1E-11 70.7 2.4 82 79-164 8-93 (133)
137 2l5l_A Thioredoxin; structural 98.2 1.8E-06 6.3E-11 67.3 6.7 66 96-165 37-105 (136)
138 3zzx_A Thioredoxin; oxidoreduc 98.2 1.3E-05 4.4E-10 60.6 10.8 41 96-138 19-59 (105)
139 4euy_A Uncharacterized protein 98.2 7.5E-07 2.6E-11 66.2 3.8 51 90-142 11-61 (105)
140 3f9u_A Putative exported cytoc 98.2 5.7E-07 2E-11 72.8 3.2 45 96-141 46-93 (172)
141 1sen_A Thioredoxin-like protei 98.2 4.7E-08 1.6E-12 79.7 -3.7 90 72-165 24-116 (164)
142 3aps_A DNAJ homolog subfamily 98.2 1.6E-06 5.3E-11 65.8 5.0 72 95-170 19-93 (122)
143 1x5d_A Protein disulfide-isome 98.2 2E-06 6.9E-11 65.9 5.5 67 96-163 24-94 (133)
144 1x5e_A Thioredoxin domain cont 98.2 3.4E-06 1.2E-10 64.5 6.4 53 97-153 23-75 (126)
145 3d6i_A Monothiol glutaredoxin- 98.2 1.4E-06 4.7E-11 65.1 4.0 46 97-142 21-66 (112)
146 3die_A Thioredoxin, TRX; elect 98.1 1.6E-06 5.6E-11 63.6 4.3 47 96-143 18-64 (106)
147 3qfa_C Thioredoxin; protein-pr 98.1 1.3E-06 4.4E-11 66.4 3.5 45 96-142 30-74 (116)
148 2djj_A PDI, protein disulfide- 98.1 1.5E-06 5.1E-11 65.7 3.8 81 80-164 9-93 (121)
149 2j23_A Thioredoxin; immune pro 98.1 8.6E-07 2.9E-11 67.9 2.3 49 94-142 30-78 (121)
150 3gix_A Thioredoxin-like protei 98.1 3.7E-06 1.3E-10 67.3 5.3 54 96-153 22-75 (149)
151 2vim_A Thioredoxin, TRX; thior 98.1 2.5E-06 8.4E-11 62.4 3.8 45 96-142 18-62 (104)
152 3m9j_A Thioredoxin; oxidoreduc 98.0 2.8E-06 9.7E-11 62.3 3.5 46 96-143 19-64 (105)
153 1fb6_A Thioredoxin M; electron 98.0 6E-06 2E-10 60.4 5.3 45 96-141 17-61 (105)
154 3idv_A Protein disulfide-isome 98.0 4.8E-06 1.7E-10 70.2 5.4 58 93-153 28-87 (241)
155 3h79_A Thioredoxin-like protei 98.0 1.7E-05 5.8E-10 60.8 7.9 46 96-141 32-81 (127)
156 1ti3_A Thioredoxin H, PTTRXH1; 98.0 5.5E-06 1.9E-10 61.5 4.3 59 97-158 26-85 (113)
157 1w4v_A Thioredoxin, mitochondr 98.0 1.7E-05 5.6E-10 60.3 7.0 45 96-141 30-74 (119)
158 1syr_A Thioredoxin; SGPP, stru 98.0 6.6E-06 2.3E-10 61.6 4.5 46 95-142 24-69 (112)
159 2wz9_A Glutaredoxin-3; protein 98.0 1.3E-05 4.6E-10 63.8 6.5 59 97-160 32-93 (153)
160 2oe3_A Thioredoxin-3; electron 98.0 1.2E-05 4.2E-10 60.9 6.0 45 95-141 28-72 (114)
161 1thx_A Thioredoxin, thioredoxi 98.0 1.2E-05 4.1E-10 59.7 5.8 47 95-142 23-69 (115)
162 2ppt_A Thioredoxin-2; thiredox 97.9 1.2E-06 4E-11 70.6 0.1 49 93-142 60-108 (155)
163 1zma_A Bacterocin transport ac 97.9 1.9E-05 6.3E-10 59.7 6.9 55 96-153 28-85 (118)
164 1gh2_A Thioredoxin-like protei 97.9 2.1E-05 7.3E-10 58.1 6.9 44 96-141 20-63 (107)
165 3cxg_A Putative thioredoxin; m 97.9 3.7E-06 1.3E-10 65.7 2.8 43 97-142 40-82 (133)
166 3emx_A Thioredoxin; structural 97.9 1.1E-05 3.7E-10 63.0 5.3 53 99-154 33-91 (135)
167 2yj7_A LPBCA thioredoxin; oxid 97.2 1.3E-06 4.6E-11 63.6 0.0 46 95-141 17-62 (106)
168 2dj0_A Thioredoxin-related tra 97.9 8E-06 2.7E-10 63.6 4.4 54 97-153 26-79 (137)
169 3gnj_A Thioredoxin domain prot 97.9 2.4E-05 8.3E-10 57.7 6.9 46 96-142 21-66 (111)
170 1xwb_A Thioredoxin; dimerizati 97.9 8.1E-06 2.8E-10 59.8 4.2 46 96-142 19-64 (106)
171 3uvt_A Thioredoxin domain-cont 97.9 4.7E-06 1.6E-10 61.6 2.8 54 97-153 21-76 (111)
172 2vm1_A Thioredoxin, thioredoxi 97.9 6.9E-06 2.4E-10 61.4 3.7 52 97-153 28-79 (118)
173 2xc2_A Thioredoxinn; oxidoredu 97.9 7.1E-06 2.4E-10 61.8 3.3 44 96-142 32-75 (117)
174 2i1u_A Thioredoxin, TRX, MPT46 97.9 1.3E-05 4.6E-10 60.2 4.5 46 96-142 29-74 (121)
175 3hz4_A Thioredoxin; NYSGXRC, P 97.8 1.1E-05 3.6E-10 63.3 4.0 54 96-153 23-76 (140)
176 3q6o_A Sulfhydryl oxidase 1; p 97.8 3E-05 1E-09 66.3 7.2 65 96-161 29-98 (244)
177 3qou_A Protein YBBN; thioredox 97.8 6.7E-06 2.3E-10 71.7 2.8 45 97-142 26-70 (287)
178 1qgv_A Spliceosomal protein U5 97.8 2.9E-05 9.9E-10 61.5 6.0 44 97-141 23-66 (142)
179 1r26_A Thioredoxin; redox-acti 97.8 3.9E-05 1.3E-09 59.3 6.1 46 95-142 35-80 (125)
180 1v98_A Thioredoxin; oxidoreduc 97.8 5.6E-05 1.9E-09 58.8 6.8 46 95-142 49-94 (140)
181 3gyk_A 27KDA outer membrane pr 97.7 4.3E-05 1.5E-09 61.7 6.1 49 85-137 12-60 (175)
182 3dxb_A Thioredoxin N-terminall 97.7 7.8E-06 2.7E-10 69.3 1.5 47 95-142 28-74 (222)
183 3apq_A DNAJ homolog subfamily 97.7 9.5E-06 3.2E-10 68.0 1.9 54 96-153 113-166 (210)
184 1wou_A Thioredoxin -related pr 97.7 3.9E-05 1.3E-09 58.8 5.0 43 97-140 24-73 (123)
185 2lst_A Thioredoxin; structural 96.9 5.7E-06 2E-10 63.4 0.0 74 85-162 9-88 (130)
186 2l6c_A Thioredoxin; oxidoreduc 97.7 1.4E-05 4.6E-10 60.0 2.1 44 96-141 18-61 (110)
187 3ed3_A Protein disulfide-isome 97.7 5.8E-05 2E-09 67.3 6.4 66 96-163 34-102 (298)
188 3t58_A Sulfhydryl oxidase 1; o 97.6 4.5E-05 1.5E-09 73.4 5.3 66 95-161 28-98 (519)
189 1nho_A Probable thioredoxin; b 97.6 2.6E-05 9E-10 54.8 2.3 39 100-139 4-42 (85)
190 1oaz_A Thioredoxin 1; immune s 97.6 0.00015 5.1E-09 55.7 6.5 44 95-139 19-76 (123)
191 1a8l_A Protein disulfide oxido 97.5 0.00016 5.6E-09 60.4 6.6 55 96-153 133-190 (226)
192 2dbc_A PDCL2, unnamed protein 97.5 0.00016 5.3E-09 56.5 5.9 42 97-140 30-71 (135)
193 3qcp_A QSOX from trypanosoma b 97.5 0.00017 5.7E-09 68.7 7.0 61 98-161 43-113 (470)
194 3ira_A Conserved protein; meth 97.5 0.00013 4.6E-09 60.4 5.5 70 96-166 38-118 (173)
195 1fo5_A Thioredoxin; disulfide 97.4 8E-05 2.7E-09 52.2 3.1 41 98-139 3-43 (85)
196 1eej_A Thiol:disulfide interch 97.4 0.00018 6E-09 60.9 5.5 38 96-137 85-122 (216)
197 1mek_A Protein disulfide isome 97.4 5.1E-05 1.7E-09 56.4 1.8 46 95-140 22-69 (120)
198 3kp8_A Vkorc1/thioredoxin doma 97.4 6.2E-06 2.1E-10 62.6 -3.5 29 98-126 13-41 (106)
199 1wmj_A Thioredoxin H-type; str 97.4 9.1E-06 3.1E-10 61.9 -2.5 43 97-141 36-78 (130)
200 2av4_A Thioredoxin-like protei 97.4 0.00026 8.9E-09 58.1 6.0 55 96-154 40-94 (160)
201 2b5e_A Protein disulfide-isome 97.3 0.00019 6.4E-09 67.8 5.2 60 94-156 28-88 (504)
202 2hls_A Protein disulfide oxido 97.3 0.00047 1.6E-08 59.4 6.9 58 96-156 137-198 (243)
203 3ph9_A Anterior gradient prote 97.3 8.5E-05 2.9E-09 60.1 2.0 74 97-171 44-120 (151)
204 3idv_A Protein disulfide-isome 97.2 0.00036 1.2E-08 58.5 5.7 57 95-154 145-203 (241)
205 2r2j_A Thioredoxin domain-cont 97.2 0.00054 1.8E-08 62.6 7.3 59 95-156 20-84 (382)
206 1ilo_A Conserved hypothetical 97.2 0.00048 1.7E-08 47.5 5.0 36 101-137 3-38 (77)
207 2ywm_A Glutaredoxin-like prote 97.2 0.00054 1.9E-08 57.4 5.9 56 96-156 135-191 (229)
208 3hd5_A Thiol:disulfide interch 97.1 0.00073 2.5E-08 55.5 6.1 43 96-139 24-66 (195)
209 2es7_A Q8ZP25_salty, putative 97.1 0.0002 7E-09 57.0 2.2 51 98-153 35-89 (142)
210 1sji_A Calsequestrin 2, calseq 97.0 0.00019 6.6E-09 64.7 1.9 48 94-142 25-79 (350)
211 3f8u_A Protein disulfide-isome 97.0 0.0007 2.4E-08 63.3 5.7 45 96-140 369-414 (481)
212 1a0r_P Phosducin, MEKA, PP33; 96.9 0.0006 2E-08 59.5 4.3 41 97-139 133-173 (245)
213 3uem_A Protein disulfide-isome 96.9 0.0011 3.6E-08 59.6 6.0 45 95-139 265-310 (361)
214 3iv4_A Putative oxidoreductase 96.9 0.0021 7E-08 49.7 6.4 43 93-138 20-62 (112)
215 3f8u_A Protein disulfide-isome 96.8 0.0011 3.7E-08 62.0 5.2 53 98-154 22-74 (481)
216 2e7p_A Glutaredoxin; thioredox 96.8 0.0011 3.9E-08 49.4 4.2 57 95-158 18-77 (116)
217 2qgv_A Hydrogenase-1 operon pr 96.7 0.0011 3.6E-08 53.3 3.9 54 96-153 34-89 (140)
218 1h75_A Glutaredoxin-like prote 96.7 0.0035 1.2E-07 43.7 6.3 53 101-160 3-56 (81)
219 3apo_A DNAJ homolog subfamily 96.7 0.0023 7.7E-08 63.6 6.9 48 96-144 454-501 (780)
220 3evi_A Phosducin-like protein 96.7 0.0022 7.5E-08 49.4 5.2 40 99-140 25-64 (118)
221 3apo_A DNAJ homolog subfamily 96.7 0.0012 4E-08 65.6 4.6 46 96-142 674-719 (780)
222 1ego_A Glutaredoxin; electron 96.6 0.0018 6.1E-08 45.5 4.2 56 101-158 3-62 (85)
223 2znm_A Thiol:disulfide interch 96.6 0.00077 2.6E-08 55.2 2.5 42 96-138 21-62 (195)
224 1wjk_A C330018D20RIK protein; 96.6 0.0018 6E-08 48.2 4.1 67 87-160 6-73 (100)
225 2qsi_A Putative hydrogenase ex 96.6 0.0043 1.5E-07 49.5 6.4 53 97-153 33-87 (137)
226 2b5e_A Protein disulfide-isome 96.6 0.0014 4.7E-08 61.8 4.2 44 96-139 375-420 (504)
227 1r7h_A NRDH-redoxin; thioredox 96.6 0.0061 2.1E-07 41.5 6.4 53 101-160 3-56 (75)
228 3h93_A Thiol:disulfide interch 96.5 0.0053 1.8E-07 50.1 6.9 41 96-137 24-64 (192)
229 3ga4_A Dolichyl-diphosphooligo 96.5 0.0086 2.9E-07 49.7 8.0 55 97-154 37-102 (178)
230 2k8s_A Thioredoxin; dimer, str 96.5 0.0022 7.6E-08 45.1 3.9 36 101-139 4-39 (80)
231 2trc_P Phosducin, MEKA, PP33; 96.5 0.0016 5.4E-08 55.4 3.6 40 98-139 121-160 (217)
232 2fgx_A Putative thioredoxin; N 96.5 0.004 1.4E-07 47.5 5.3 54 99-158 30-83 (107)
233 2rem_A Disulfide oxidoreductas 96.4 0.0049 1.7E-07 50.1 5.8 41 96-137 24-64 (193)
234 1a8l_A Protein disulfide oxido 96.1 0.01 3.5E-07 49.2 6.6 55 96-153 21-76 (226)
235 1z6m_A Conserved hypothetical 96.0 0.014 4.8E-07 46.7 6.7 50 87-138 19-69 (175)
236 3us3_A Calsequestrin-1; calciu 96.0 0.0087 3E-07 54.4 5.9 56 95-153 28-89 (367)
237 2ywm_A Glutaredoxin-like prote 95.9 0.013 4.6E-07 48.7 6.5 56 96-154 20-80 (229)
238 1ttz_A Conserved hypothetical 95.9 0.0075 2.6E-07 43.9 4.3 49 101-159 3-52 (87)
239 1t3b_A Thiol:disulfide interch 95.8 0.0089 3E-07 50.2 4.7 38 96-137 85-122 (211)
240 2klx_A Glutaredoxin; thioredox 95.3 0.047 1.6E-06 38.8 6.5 51 101-159 8-60 (89)
241 3c1r_A Glutaredoxin-1; oxidize 95.2 0.031 1.1E-06 42.5 5.6 54 101-160 27-89 (118)
242 3l78_A Regulatory protein SPX; 95.1 0.055 1.9E-06 41.6 6.7 66 101-173 2-71 (120)
243 3dml_A Putative uncharacterize 95.0 0.01 3.6E-07 45.8 2.4 27 97-123 18-44 (116)
244 3rhb_A ATGRXC5, glutaredoxin-C 95.0 0.042 1.4E-06 41.0 5.7 53 101-160 21-80 (113)
245 2dlx_A UBX domain-containing p 94.9 0.088 3E-06 42.3 7.7 64 97-162 42-111 (153)
246 1wik_A Thioredoxin-like protei 94.8 0.093 3.2E-06 39.1 7.2 59 94-160 12-77 (109)
247 1v58_A Thiol:disulfide interch 94.8 0.048 1.7E-06 46.6 6.2 46 87-137 89-134 (241)
248 1fov_A Glutaredoxin 3, GRX3; a 94.8 0.074 2.5E-06 36.6 6.2 53 101-160 3-57 (82)
249 1kte_A Thioltransferase; redox 94.8 0.057 2E-06 39.3 5.8 51 101-158 14-72 (105)
250 2hze_A Glutaredoxin-1; thiored 94.7 0.053 1.8E-06 40.7 5.6 50 101-157 21-78 (114)
251 1hyu_A AHPF, alkyl hydroperoxi 94.6 0.04 1.4E-06 52.3 5.9 53 96-153 116-168 (521)
252 2yan_A Glutaredoxin-3; oxidore 94.6 0.08 2.7E-06 39.1 6.3 58 95-160 15-79 (105)
253 3hz8_A Thiol:disulfide interch 94.5 0.034 1.2E-06 45.7 4.5 42 96-138 23-64 (193)
254 1aba_A Glutaredoxin; electron 94.5 0.13 4.5E-06 36.4 7.1 47 101-154 2-58 (87)
255 1z3e_A Regulatory protein SPX; 94.4 0.12 4E-06 40.3 7.2 66 101-173 3-72 (132)
256 3fz4_A Putative arsenate reduc 94.4 0.095 3.3E-06 40.3 6.5 67 100-173 4-74 (120)
257 3gkx_A Putative ARSC family re 94.3 0.093 3.2E-06 40.4 6.3 66 101-173 6-75 (120)
258 3rdw_A Putative arsenate reduc 94.3 0.11 3.9E-06 39.9 6.8 66 101-173 7-77 (121)
259 2khp_A Glutaredoxin; thioredox 94.3 0.14 4.7E-06 36.3 6.7 52 101-159 8-61 (92)
260 2cq9_A GLRX2 protein, glutared 94.2 0.092 3.1E-06 40.5 6.1 48 104-158 32-84 (130)
261 3ctg_A Glutaredoxin-2; reduced 94.1 0.085 2.9E-06 40.9 5.7 53 101-160 39-101 (129)
262 3f0i_A Arsenate reductase; str 94.0 0.13 4.6E-06 39.4 6.6 66 101-173 6-76 (119)
263 3ic4_A Glutaredoxin (GRX-1); s 93.8 0.13 4.3E-06 36.5 5.8 53 101-160 14-73 (92)
264 3qmx_A Glutaredoxin A, glutare 93.7 0.16 5.4E-06 37.4 6.3 53 101-160 18-74 (99)
265 1s3c_A Arsenate reductase; ARS 93.6 0.13 4.4E-06 40.8 6.0 67 101-174 4-74 (141)
266 2ht9_A Glutaredoxin-2; thiored 93.6 0.12 4.2E-06 40.9 5.9 48 104-158 54-106 (146)
267 3msz_A Glutaredoxin 1; alpha-b 93.6 0.21 7.2E-06 34.7 6.5 53 101-160 6-67 (89)
268 1pn0_A Phenol 2-monooxygenase; 93.4 0.79 2.7E-05 44.8 12.5 55 68-122 478-535 (665)
269 3l9v_A Putative thiol-disulfid 93.4 0.053 1.8E-06 44.4 3.5 41 96-138 14-57 (189)
270 2wci_A Glutaredoxin-4; redox-a 93.3 0.17 5.9E-06 39.7 6.2 55 100-161 37-98 (135)
271 2wem_A Glutaredoxin-related pr 93.2 0.2 6.7E-06 38.4 6.3 56 99-161 21-84 (118)
272 1un2_A DSBA, thiol-disulfide i 93.0 0.027 9.2E-07 47.0 1.1 41 98-139 114-157 (197)
273 2lqo_A Putative glutaredoxin R 92.6 0.14 5E-06 37.5 4.5 50 101-157 6-58 (92)
274 2qc7_A ERP31, ERP28, endoplasm 92.4 0.067 2.3E-06 46.2 2.9 58 95-156 20-85 (240)
275 3ipz_A Monothiol glutaredoxin- 92.4 0.24 8E-06 37.0 5.6 55 99-160 19-80 (109)
276 3ihg_A RDME; flavoenzyme, anth 92.3 0.52 1.8E-05 44.3 9.2 35 67-102 418-452 (535)
277 3gx8_A Monothiol glutaredoxin- 92.2 0.29 9.9E-06 37.4 6.1 56 99-161 17-82 (121)
278 2ct6_A SH3 domain-binding glut 92.2 0.35 1.2E-05 36.2 6.4 48 101-150 10-59 (111)
279 3nzn_A Glutaredoxin; structura 92.2 0.35 1.2E-05 35.3 6.3 21 101-121 24-44 (103)
280 3h8q_A Thioredoxin reductase 3 92.2 0.38 1.3E-05 36.0 6.6 50 104-160 22-77 (114)
281 3uem_A Protein disulfide-isome 92.2 0.26 8.8E-06 43.8 6.6 56 97-154 135-190 (361)
282 2c0g_A ERP29 homolog, windbeut 92.1 0.25 8.4E-06 42.8 6.2 58 95-156 31-97 (248)
283 1rw1_A Conserved hypothetical 91.5 0.2 6.8E-06 37.9 4.3 64 101-173 2-69 (114)
284 3kp9_A Vkorc1/thioredoxin doma 91.4 0.039 1.3E-06 49.2 0.2 38 87-126 189-226 (291)
285 2dkh_A 3-hydroxybenzoate hydro 91.3 0.53 1.8E-05 45.7 8.2 35 69-103 467-504 (639)
286 1t1v_A SH3BGRL3, SH3 domain-bi 91.2 0.57 1.9E-05 33.5 6.4 54 101-160 4-67 (93)
287 3zyw_A Glutaredoxin-3; metal b 91.1 0.3 1E-05 36.7 5.0 60 93-160 12-78 (111)
288 2kok_A Arsenate reductase; bru 91.1 0.55 1.9E-05 35.7 6.5 64 101-173 7-74 (120)
289 2djk_A PDI, protein disulfide- 90.9 0.14 4.9E-06 39.1 3.0 53 97-154 23-75 (133)
290 3feu_A Putative lipoprotein; a 89.9 0.16 5.3E-06 41.5 2.6 36 97-136 23-58 (185)
291 3gv1_A Disulfide interchange p 88.7 0.47 1.6E-05 37.6 4.5 36 95-136 12-47 (147)
292 2hls_A Protein disulfide oxido 87.0 0.64 2.2E-05 39.5 4.6 45 96-141 25-75 (243)
293 3gn3_A Putative protein-disulf 85.0 0.68 2.3E-05 37.7 3.7 43 95-137 12-54 (182)
294 3c7m_A Thiol:disulfide interch 83.2 1.8 6.1E-05 34.4 5.4 39 98-138 19-58 (195)
295 2wul_A Glutaredoxin related pr 82.2 3.4 0.00011 31.6 6.3 56 99-161 21-84 (118)
296 4dvc_A Thiol:disulfide interch 81.5 2.4 8.2E-05 33.2 5.5 39 96-136 21-59 (184)
297 3l9s_A Thiol:disulfide interch 81.4 0.65 2.2E-05 38.0 2.1 39 98-137 22-63 (191)
298 3bci_A Disulfide bond protein 81.0 2.2 7.5E-05 34.0 5.2 42 96-137 10-53 (186)
299 1nm3_A Protein HI0572; hybrid, 78.9 1.7 6E-05 36.2 4.0 53 100-159 171-224 (241)
300 1u6t_A SH3 domain-binding glut 76.8 7.2 0.00025 29.9 6.7 46 100-151 1-52 (121)
301 3tdg_A DSBG, putative uncharac 76.0 3 0.0001 36.6 4.8 39 97-138 147-185 (273)
302 2ec4_A FAS-associated factor 1 74.3 12 0.00043 30.2 7.9 47 95-142 53-102 (178)
303 3gha_A Disulfide bond formatio 73.3 4.2 0.00014 33.3 4.9 42 96-137 28-71 (202)
304 3f4s_A Alpha-DSBA1, putative u 71.8 5.2 0.00018 33.6 5.2 42 96-137 38-81 (226)
305 3gmf_A Protein-disulfide isome 71.2 8.4 0.00029 31.7 6.3 49 87-137 7-57 (205)
306 2axo_A Hypothetical protein AT 70.6 16 0.00056 31.8 8.2 37 98-137 43-79 (270)
307 2in3_A Hypothetical protein; D 69.5 16 0.00056 29.2 7.6 39 98-137 7-45 (216)
308 3l4n_A Monothiol glutaredoxin- 68.8 3.6 0.00012 31.6 3.2 62 94-161 11-78 (127)
309 4f9z_D Endoplasmic reticulum r 66.4 16 0.00054 30.0 7.0 56 97-154 131-186 (227)
310 2jad_A Yellow fluorescent prot 52.6 26 0.00087 31.9 6.3 55 100-161 263-326 (362)
311 3ghf_A Septum site-determining 52.0 16 0.00053 27.8 4.1 39 117-155 61-99 (120)
312 2x8g_A Thioredoxin glutathione 51.2 17 0.0006 34.3 5.2 18 104-121 23-40 (598)
313 3kzq_A Putative uncharacterize 50.8 28 0.00097 27.9 5.8 37 100-137 4-40 (208)
314 4gxt_A A conserved functionall 50.6 14 0.00049 33.5 4.3 39 117-155 224-262 (385)
315 1w41_A 50S ribosomal protein L 47.3 48 0.0016 23.9 6.0 53 122-174 24-80 (101)
316 3j21_Z 50S ribosomal protein L 46.0 36 0.0012 24.6 5.1 53 122-174 23-79 (99)
317 4as2_A Phosphorylcholine phosp 45.9 17 0.00058 32.3 4.0 35 117-151 146-180 (327)
318 2gjf_A Designed protein; proca 42.0 23 0.0008 24.2 3.4 28 133-160 50-77 (78)
319 4ev1_A Anabena TIC22; TIC22 fo 41.3 45 0.0015 28.7 5.8 84 70-161 9-110 (252)
320 3umv_A Deoxyribodipyrimidine p 40.9 89 0.003 29.4 8.3 63 97-161 68-137 (506)
321 3fvv_A Uncharacterized protein 40.4 52 0.0018 25.9 5.9 38 117-154 95-132 (232)
322 1l6r_A Hypothetical protein TA 39.4 57 0.002 26.5 6.0 39 119-157 27-65 (227)
323 2obb_A Hypothetical protein; s 38.5 44 0.0015 26.0 4.9 41 120-160 30-73 (142)
324 3mdq_A Exopolyphosphatase; str 36.7 70 0.0024 27.9 6.5 61 114-174 57-125 (315)
325 3u5e_c L32, RP73, YL38, 60S ri 36.5 65 0.0022 23.5 5.3 53 122-174 30-86 (105)
326 2wm8_A MDP-1, magnesium-depend 35.6 47 0.0016 25.8 4.8 38 117-154 71-109 (187)
327 2p9j_A Hypothetical protein AQ 34.6 63 0.0022 24.2 5.2 35 120-154 42-76 (162)
328 2fpr_A Histidine biosynthesis 34.1 40 0.0014 26.2 4.1 41 117-157 45-100 (176)
329 4a18_G RPL30; ribosome, eukary 33.9 86 0.0029 22.7 5.6 53 122-174 30-86 (104)
330 3cpq_A 50S ribosomal protein L 33.5 94 0.0032 22.7 5.9 52 123-174 30-85 (110)
331 3hug_B Probable conserved memb 32.6 23 0.00078 26.7 2.2 24 107-130 52-75 (108)
332 1vjq_A Designed protein; struc 30.8 37 0.0013 23.1 3.0 28 133-160 42-69 (79)
333 1sji_A Calsequestrin 2, calseq 30.2 1.3E+02 0.0044 26.0 7.1 64 98-161 246-315 (350)
334 1dnp_A DNA photolyase; DNA rep 30.2 97 0.0033 28.7 6.6 63 97-160 28-102 (471)
335 4e6z_A Apicoplast TIC22, putat 30.1 35 0.0012 29.9 3.3 66 68-142 70-139 (279)
336 3v7e_A Ribosome-associated pro 29.9 1.2E+02 0.004 21.0 5.5 52 123-175 20-75 (82)
337 2xry_A Deoxyribodipyrimidine p 29.9 1.2E+02 0.0041 28.0 7.2 58 114-172 89-155 (482)
338 2wq7_A RE11660P; lyase-DNA com 29.8 97 0.0033 29.3 6.6 46 114-160 86-131 (543)
339 2pib_A Phosphorylated carbohyd 29.6 78 0.0027 23.9 5.1 35 120-154 90-124 (216)
340 3iz5_f 60S ribosomal protein L 29.1 1E+02 0.0035 22.8 5.4 52 123-174 35-90 (112)
341 3a1c_A Probable copper-exporti 28.1 83 0.0029 26.3 5.4 52 121-172 170-224 (287)
342 4hoj_A REGF protein; GST, glut 27.9 18 0.00062 28.8 1.0 60 100-166 3-63 (210)
343 2gmw_A D,D-heptose 1,7-bisphos 27.4 86 0.0029 24.9 5.1 40 117-156 53-107 (211)
344 3ira_A Conserved protein; meth 27.4 80 0.0027 25.1 4.8 36 215-251 105-143 (173)
345 1s2w_A Phosphoenolpyruvate pho 27.1 2.4E+02 0.0083 24.4 8.3 60 116-175 169-236 (295)
346 2j07_A Deoxyribodipyrimidine p 27.1 94 0.0032 28.3 5.8 58 114-172 49-115 (420)
347 3mmz_A Putative HAD family hyd 26.3 86 0.003 24.2 4.8 33 122-154 47-79 (176)
348 3e58_A Putative beta-phosphogl 26.2 87 0.003 23.6 4.8 36 119-154 94-129 (214)
349 1nnl_A L-3-phosphoserine phosp 25.9 55 0.0019 25.7 3.6 37 119-155 91-127 (225)
350 1wr8_A Phosphoglycolate phosph 25.4 1.2E+02 0.004 24.4 5.6 40 119-158 25-64 (231)
351 3cer_A Possible exopolyphospha 24.8 1.3E+02 0.0044 26.7 6.1 60 115-174 71-138 (343)
352 3pe6_A Monoglyceride lipase; a 24.4 1.3E+02 0.0045 23.6 5.7 58 76-138 17-77 (303)
353 2imf_A HCCA isomerase, 2-hydro 24.1 99 0.0034 24.4 4.9 34 101-137 3-36 (203)
354 1k1e_A Deoxy-D-mannose-octulos 23.7 1.2E+02 0.0041 23.3 5.2 35 121-155 42-76 (180)
355 2q1z_B Anti-sigma factor CHRR, 23.4 46 0.0016 27.0 2.7 21 107-127 33-53 (195)
356 2pr7_A Haloacid dehalogenase/e 23.1 45 0.0015 23.8 2.4 39 115-153 19-57 (137)
357 2jvx_A NF-kappa-B essential mo 23.0 4.9 0.00017 23.0 -2.4 20 108-127 5-24 (28)
358 2jya_A AGR_C_3324P, uncharacte 22.8 65 0.0022 24.1 3.1 29 134-162 54-82 (106)
359 3ib6_A Uncharacterized protein 22.8 91 0.0031 24.2 4.3 38 117-154 37-77 (189)
360 3lvj_C Sulfurtransferase TUSA; 22.5 1.9E+02 0.0065 19.8 5.8 56 97-158 8-67 (82)
361 1np7_A DNA photolyase; protein 22.4 1E+02 0.0035 28.5 5.2 46 114-160 62-107 (489)
362 3hju_A Monoglyceride lipase; a 22.3 1.6E+02 0.0056 24.1 6.1 60 74-138 33-95 (342)
363 3v7q_A Probable ribosomal prot 22.2 2.1E+02 0.0072 20.4 5.9 50 123-173 28-81 (101)
364 4hyl_A Stage II sporulation pr 22.1 2E+02 0.0067 20.3 5.8 44 116-161 60-105 (117)
365 1owl_A Photolyase, deoxyribodi 22.0 1.1E+02 0.0037 28.4 5.3 45 115-160 55-99 (484)
366 3m9l_A Hydrolase, haloacid deh 21.9 1.1E+02 0.0037 23.5 4.6 35 120-154 76-110 (205)
367 3dxs_X Copper-transporting ATP 21.8 1E+02 0.0035 19.6 3.8 56 100-160 4-72 (74)
368 3dex_A SAV_2001; alpha-beta pr 21.8 34 0.0012 25.7 1.4 33 215-251 53-85 (107)
369 2r47_A Uncharacterized protein 21.4 50 0.0017 26.5 2.3 83 74-161 64-146 (157)
370 1nrw_A Hypothetical protein, h 21.1 1.9E+02 0.0064 23.9 6.2 39 121-159 28-66 (288)
371 3ibs_A Conserved hypothetical 21.0 2.6E+02 0.009 21.7 6.9 22 119-140 128-149 (218)
372 4hde_A SCO1/SENC family lipopr 21.0 44 0.0015 25.9 2.0 39 77-124 24-63 (170)
373 3nuq_A Protein SSM1, putative 20.8 2.7E+02 0.0093 22.4 7.1 38 117-154 145-184 (282)
374 3s6j_A Hydrolase, haloacid deh 20.7 95 0.0033 24.0 4.0 35 120-154 97-131 (233)
375 2l69_A Rossmann 2X3 fold prote 20.5 2.6E+02 0.0089 20.5 7.0 53 117-169 36-93 (134)
376 2nyv_A Pgpase, PGP, phosphogly 20.1 1.2E+02 0.0041 23.8 4.6 36 119-154 88-123 (222)
No 1
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.98 E-value=3.5e-32 Score=222.76 Aligned_cols=153 Identities=14% Similarity=0.163 Sum_probs=130.4
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f 147 (252)
-+++|++||+|+|.|.+|+.++|+++ +++++||.|+|++|||+|+.|+++|++.++++++.|+.+|+|+.|+++.+++|
T Consensus 3 ~l~vG~~aPdF~l~~~~G~~~~l~d~-~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~ 81 (157)
T 4g2e_A 3 MVEIGELAPDFELPDTELKKVKLSAL-KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAF 81 (157)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEGGGG-TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHH
T ss_pred cCCCCCCCcCeEeECCCCCEEeHHHH-CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHH
Confidence 36899999999999999999999998 56778888888999999999999999999999999999999999999999999
Q ss_pred HHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCCe
Q 025441 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 227 (252)
+++++++||+++|++++++++||+...... ..+.....+++||||++ |+
T Consensus 82 ~~~~~~~~p~l~D~~~~v~~~ygv~~~~~~------------------------------~~~~~~~~p~tflID~~-G~ 130 (157)
T 4g2e_A 82 KEHNKLNFTILSDYNREVVKKYNVAWEFPA------------------------------LPGYVLAKRAVFVIDKE-GK 130 (157)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCEEECTT------------------------------STTCEEECEEEEEECTT-SB
T ss_pred HHHcCCcEEEEEcCCcHHHHHcCCcccccc------------------------------CCCcceeeeeEEEECCC-CE
Confidence 999999999999999999999998754310 01122457899999999 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHhhC
Q 025441 228 ISYIHRDKEAGDDPDIQDILKACCS 252 (252)
Q Consensus 228 I~~~h~~~~~~D~~~~~eIL~al~~ 252 (252)
|+|.|+..++.+++++++|++++++
T Consensus 131 I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 131 VRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp EEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999864
No 2
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.97 E-value=9.7e-33 Score=228.25 Aligned_cols=151 Identities=12% Similarity=0.206 Sum_probs=135.4
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCcc-CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLW-KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~-~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f 147 (252)
+++|++||+|+|.|.+|+.++|+++. +++++||+|||++|||+|+.|++.|++.+++|++.|+.+|+||.|+++.+++|
T Consensus 5 l~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 84 (164)
T 4gqc_A 5 VELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKF 84 (164)
T ss_dssp CCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHH
T ss_pred ccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHH
Confidence 68999999999999999999999986 45689999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCCe
Q 025441 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 227 (252)
+++++++||+++|++++++++||+..... .+. .....+++||||++ |+
T Consensus 85 ~~~~~~~fp~l~D~~~~v~~~ygv~~~~~----------------~~~---------------~~~~~p~tflID~~-G~ 132 (164)
T 4gqc_A 85 KDENRLAFNLLSDYNREVIKLYNVYHEDL----------------KGL---------------KMVAKRAVFIVKPD-GT 132 (164)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCEEEEE----------------TTE---------------EEEECCEEEEECTT-SB
T ss_pred HHhcCcccceeecCchHHHHHcCCccccc----------------ccC---------------cCCeeeEEEEECCC-CE
Confidence 99999999999999999999999864321 000 01346799999999 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 228 ISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 228 I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|+|.|+..++.++++++++|++++
T Consensus 133 I~~~~~~~~~~~~~~~~eil~~l~ 156 (164)
T 4gqc_A 133 VAYKWVTDNPLNEPDYDEVVREAN 156 (164)
T ss_dssp EEEEEECSCTTCCCCHHHHHHHHH
T ss_pred EEEEEEeCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999886
No 3
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.96 E-value=9.1e-29 Score=207.09 Aligned_cols=154 Identities=13% Similarity=0.137 Sum_probs=132.5
Q ss_pred CCccccCCCCCcEEe-cCCCCeEeCCCccCCCeEEEEEEcCCCCHhhH-HHHHHHHHhHHHHHhCCCEEEE-EecCCHHH
Q 025441 67 VSEDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGVALVL-IGPGSVEQ 143 (252)
Q Consensus 67 ~~~~~g~~apdf~L~-d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~-~el~~L~~~~~~~~~~Gv~vVa-Vs~d~~~~ 143 (252)
+++++|+.||+|+|. |.+|+.++|+++++++++||+|||+.|||.|+ +|+++|++.+++|++.|++||+ ||.|+.+.
T Consensus 13 ~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~ 92 (173)
T 3mng_A 13 APIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFV 92 (173)
T ss_dssp CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHH
T ss_pred CCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHH
Confidence 456899999999999 99999999999777888999999999999999 5999999999999999999997 99999999
Q ss_pred HHHHHHHcCCc--ceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEE
Q 025441 144 ARTFSEQTKFK--GEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 144 ~~~f~~~~~l~--fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 221 (252)
+++|+++++++ ||+++|++.++.++||+..... .. ... | +....+++|||
T Consensus 93 ~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~-------~~----~~~------------g-----~~~~~r~tfvI 144 (173)
T 3mng_A 93 TGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDS-------LV----SIF------------G-----NRRLKRFSMVV 144 (173)
T ss_dssp HHHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCST-------TH----HHH------------S-----SCCBCCEEEEE
T ss_pred HHHHHHHhCCCCceEEEECCChHHHHHhCCCcccc-------cc----ccc------------C-----CcceEEEEEEE
Confidence 99999999998 9999999999999999875421 00 000 1 11357899999
Q ss_pred eCCCCeEEEEEeCCCC--CCCCCHHHHHHHh
Q 025441 222 GPGKSNISYIHRDKEA--GDDPDIQDILKAC 250 (252)
Q Consensus 222 d~ggg~I~~~h~~~~~--~D~~~~~eIL~al 250 (252)
| + |+|+|.|++.++ .+..+.++||++|
T Consensus 145 D-d-G~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 145 Q-D-GIVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp E-T-TEEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred E-C-CEEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 9 8 699999999775 4568899999875
No 4
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.96 E-value=3.6e-28 Score=205.30 Aligned_cols=152 Identities=10% Similarity=0.102 Sum_probs=132.3
Q ss_pred CCccccCCCCCcEEecC--CC-CeEeCCCccCCCeEEEEEEcCCCCHhhHH-HHHHHHHhHHHHHhCCCE-EEEEecCCH
Q 025441 67 VSEDTKNLLDTVKVYDV--NG-NAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGVA-LVLIGPGSV 141 (252)
Q Consensus 67 ~~~~~g~~apdf~L~d~--~G-~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~-el~~L~~~~~~~~~~Gv~-vVaVs~d~~ 141 (252)
..+++|+.+|+|++.|. +| +.++|+++++++++||+|||+.|||+|+. |++.|++++++|++.|++ ||+|+.+++
T Consensus 24 ~~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~ 103 (184)
T 3uma_A 24 MTIAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDL 103 (184)
T ss_dssp SCCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCH
T ss_pred CcCCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCH
Confidence 34799999999999998 99 99999996677889999999999999999 899999999999999999 999999999
Q ss_pred HHHHHHHHHcCCc--ceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEE
Q 025441 142 EQARTFSEQTKFK--GEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGII 219 (252)
Q Consensus 142 ~~~~~f~~~~~l~--fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~f 219 (252)
+.+++|+++++++ ||+++|++.++.++||+..... . .|+ | ....+++|
T Consensus 104 ~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~-----~----------~g~---------g------~~~~r~tf 153 (184)
T 3uma_A 104 HVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLS-----A----------GTL---------G------IRSKRYSM 153 (184)
T ss_dssp HHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEG-----G----------GTC---------E------EEECCEEE
T ss_pred HHHHHHHHHhCCCCceEEEEcCchHHHHHcCCceecc-----c----------cCC---------c------ccceeEEE
Confidence 9999999999999 9999999999999999875421 0 010 0 12457899
Q ss_pred EEeCCCCeEEEEEeCCCCCC--CCCHHHHHHHh
Q 025441 220 VAGPGKSNISYIHRDKEAGD--DPDIQDILKAC 250 (252)
Q Consensus 220 Vid~ggg~I~~~h~~~~~~D--~~~~~eIL~al 250 (252)
||+ + |+|+|.|++.++++ .++++++|+.|
T Consensus 154 iId-d-G~I~~~~~~~~~g~~~~~~~~~vL~~L 184 (184)
T 3uma_A 154 LVE-D-GVVKALNIEESPGQATASGAAAMLELL 184 (184)
T ss_dssp EEE-T-TEEEEEEECSSTTCCSTTSHHHHHHHC
T ss_pred EEC-C-CEEEEEEEeCCCCCCcCCCHHHHHhhC
Confidence 997 7 69999999987755 89999999875
No 5
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.95 E-value=1.3e-26 Score=190.13 Aligned_cols=145 Identities=13% Similarity=0.156 Sum_probs=129.5
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f 147 (252)
..++|+.+|+|++.|.+|+.++++++ +++++||.|+++.||++|+.|++.|++++++ .|++||+|+.|+.+.+++|
T Consensus 19 ~l~~G~~aP~f~l~~~~G~~~~l~~~-~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~~~~~~~ 94 (166)
T 3p7x_A 19 QINEGDFAPDFTVLDNDLNQVTLADY-AGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLPFAQKRW 94 (166)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCHHHHHHH
T ss_pred cCCCCCCCCCeEEEcCCCCEEeHHHh-CCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCHHHHHHH
Confidence 46899999999999999999999998 5667888887799999999999999999877 8999999999999999999
Q ss_pred HHHcCC-cceeeecC-ChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCC
Q 025441 148 SEQTKF-KGEVYADP-NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 225 (252)
Q Consensus 148 ~~~~~l-~fpllsDp-~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 225 (252)
++++++ +|++++|+ +.+++++||+.... .+...+.+||||++
T Consensus 95 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~-----------------------------------~g~~~p~~~liD~~- 138 (166)
T 3p7x_A 95 CASAGLDNVITLSDHRDLSFGENYGVVMEE-----------------------------------LRLLARAVFVLDAD- 138 (166)
T ss_dssp HHHHTCSSCEEEECTTTCHHHHHHTCEETT-----------------------------------TTEECCEEEEECTT-
T ss_pred HHHcCCCceEEccCCchhHHHHHhCCcccc-----------------------------------CCceeeEEEEECCC-
Confidence 999999 89999999 99999999986431 01235789999999
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhhC
Q 025441 226 SNISYIHRDKEAGDDPDIQDILKACCS 252 (252)
Q Consensus 226 g~I~~~h~~~~~~D~~~~~eIL~al~~ 252 (252)
|+|+|.|+..+..++++++++++++++
T Consensus 139 G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 139 NKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp CBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred CeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 699999999999999999999999874
No 6
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.94 E-value=1.3e-26 Score=190.05 Aligned_cols=149 Identities=14% Similarity=0.148 Sum_probs=128.2
Q ss_pred ccccCCCCCcEEe--cCCC--CeEeCCCccCCCeEEEEEEcCCCCHhhH-HHHHHHHHhHHHHHhCCCE-EEEEecCCHH
Q 025441 69 EDTKNLLDTVKVY--DVNG--NAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGVA-LVLIGPGSVE 142 (252)
Q Consensus 69 ~~~g~~apdf~L~--d~~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~-~el~~L~~~~~~~~~~Gv~-vVaVs~d~~~ 142 (252)
.++|+.+|+|++. |.+| +.++|+++++++++||.|+++.|||.|+ .|+++|++++++|++.|++ ||+|+.|+++
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~ 83 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPF 83 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHH
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
Confidence 5789999999986 8999 9999999556778888888899999999 8999999999999999999 9999999999
Q ss_pred HHHHHHHHcCC--cceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEE
Q 025441 143 QARTFSEQTKF--KGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 220 (252)
Q Consensus 143 ~~~~f~~~~~l--~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fV 220 (252)
.+++|++++++ +|++++|++.++.++||+..... + .|+ | ....+++||
T Consensus 84 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~----~-----------~g~---------~------~~~~p~~~v 133 (162)
T 1tp9_A 84 VMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQ----E-----------KGL---------G------TRSRRFALL 133 (162)
T ss_dssp HHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEET----T-----------TTS---------E------EEECCEEEE
T ss_pred HHHHHHHhcCCCCCeEEEECCCchHHHHcCcccccc----c-----------CCC---------C------ccceeEEEE
Confidence 99999999999 89999999999999999874321 0 010 0 124678999
Q ss_pred EeCCCCeEEEEEeCCCCCCCC--CHHHHHHHh
Q 025441 221 AGPGKSNISYIHRDKEAGDDP--DIQDILKAC 250 (252)
Q Consensus 221 id~ggg~I~~~h~~~~~~D~~--~~~eIL~al 250 (252)
|| + |+|+|.|++. +++++ ++++||++|
T Consensus 134 id-~-G~i~~~~~~~-~~~~~~~~~~~vl~~l 162 (162)
T 1tp9_A 134 VD-D-LKVKAANIEG-GGEFTVSSAEDILKDL 162 (162)
T ss_dssp EE-T-TEEEEEEECS-SSCCSSCSHHHHHTTC
T ss_pred EE-C-CEEEEEEeeC-CCCCccCCHHHHHhhC
Confidence 99 8 6999999987 88877 899999764
No 7
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.94 E-value=5.7e-26 Score=185.74 Aligned_cols=145 Identities=8% Similarity=0.141 Sum_probs=126.1
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f 147 (252)
..++|+.+|+|++.|.+|+.++++++ +++++||.|+++.||+.|+.|++.|+++++++ .|+++|+|+.|+.+.+++|
T Consensus 15 ~~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~~~ 91 (163)
T 1psq_A 15 QLQVGDKALDFSLTTTDLSKKSLADF-DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQKRW 91 (163)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHH
T ss_pred CCCCCCCCCCEEEEcCCCcEeeHHHh-CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHHHH
Confidence 36789999999999999999999998 44555554444699999999999999999988 7999999999999999999
Q ss_pred HHHcCC-cceeeec-CChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCC
Q 025441 148 SEQTKF-KGEVYAD-PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 225 (252)
Q Consensus 148 ~~~~~l-~fpllsD-p~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 225 (252)
++++++ +|++++| ++..++++||+.... .++..+.+||||++
T Consensus 92 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~-----------------------------------~g~~~p~~~liD~~- 135 (163)
T 1psq_A 92 CGAEGLDNAIMLSDYFDHSFGRDYALLINE-----------------------------------WHLLARAVFVLDTD- 135 (163)
T ss_dssp HHHHTCTTSEEEECTTTCHHHHHHTCBCTT-----------------------------------TCSBCCEEEEECTT-
T ss_pred HHhcCCCCcEEecCCchhHHHHHhCCcccc-----------------------------------CCceEEEEEEEcCC-
Confidence 999999 9999999 899999999876321 01235789999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 226 SNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 226 g~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|+|++.|.+.+..+++++++++++++
T Consensus 136 G~i~~~~~g~~~~~~~~~~~~l~~l~ 161 (163)
T 1psq_A 136 NTIRYVEYVDNINSEPNFEAAIAAAK 161 (163)
T ss_dssp CBEEEEEECSBTTSCCCHHHHHHHHH
T ss_pred CeEEEEEecCCcCCCCCHHHHHHHHH
Confidence 69999999988999999999999986
No 8
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.94 E-value=5e-26 Score=184.85 Aligned_cols=155 Identities=12% Similarity=0.075 Sum_probs=126.9
Q ss_pred CCCCCccccCCCCCcE--EecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH
Q 025441 64 PPSVSEDTKNLLDTVK--VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 64 ~~~~~~~~g~~apdf~--L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~ 141 (252)
+.+...++|+.+|+|+ +.|.+|++++++++ .++++||.|++++|||.|+.+++.|+++++++++.|++||+|+.|+.
T Consensus 2 ~~m~~l~~G~~~P~f~~~l~~~~G~~~~l~~~-~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~ 80 (163)
T 3gkn_A 2 NAMTDAVLELPAATFDLPLSLSGGTQTTLRAH-AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSV 80 (163)
T ss_dssp --CCCCCCCCCGGGGGCCEECSTTCEECSGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred CcccccccCCcCCCccccccCCCCCEEEHHHh-CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 3455688999999999 99999999999998 44566666655699999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEE
Q 025441 142 EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 142 ~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 221 (252)
+.+++|+++++++|++++|++.+++++||+..... .+ | .... -..+.+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~-~~--------------~------~~~~--------~~~p~~~li 131 (163)
T 3gkn_A 81 KSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKN-MY--------------G------KQVL--------GIERSTFLL 131 (163)
T ss_dssp HHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEEE-ET--------------T------EEEE--------EECCEEEEE
T ss_pred HHHHHHHHHhCCCceEEECCcHHHHHHhCCccccc-cc--------------c------cccc--------CcceEEEEE
Confidence 99999999999999999999999999999875321 00 0 0000 026789999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 222 GPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 222 d~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|++ |+|++.|.+ ......+++++++++
T Consensus 132 d~~-G~i~~~~~~--~~~~~~~~~il~~l~ 158 (163)
T 3gkn_A 132 SPE-GQVVQAWRK--VKVAGHADAVLAALK 158 (163)
T ss_dssp CTT-SCEEEEECS--CCSTTHHHHHHHHHH
T ss_pred CCC-CeEEEEEcC--CCcccCHHHHHHHHH
Confidence 998 699999943 445567889988875
No 9
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.94 E-value=8e-26 Score=187.50 Aligned_cols=150 Identities=11% Similarity=0.133 Sum_probs=127.8
Q ss_pred ccccCCCCCcEEe-cCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHH-HHHHHHHhHHHHHhCCC-EEEEEecCCHHHHH
Q 025441 69 EDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGV-ALVLIGPGSVEQAR 145 (252)
Q Consensus 69 ~~~g~~apdf~L~-d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~-el~~L~~~~~~~~~~Gv-~vVaVs~d~~~~~~ 145 (252)
+++|+.+|+|++. |.+|+.++|+++++++++||+|||++|||+|+. |++.|++++++|++.|+ +||+|+.|+.+.++
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~ 82 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMD 82 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHH
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHH
Confidence 5789999999999 999999999998777899999999999999999 99999999999999999 99999999999999
Q ss_pred HHHHHcCCc--ceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeC
Q 025441 146 TFSEQTKFK--GEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 146 ~f~~~~~l~--fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ 223 (252)
+|+++++++ ||+++|++.+++++||+..... . . . | .....|.+||| +
T Consensus 83 ~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~-----~----~----~-g----------------~~~~~p~t~lI-~ 131 (167)
T 2wfc_A 83 AWGKAHGADDKVQMLADPGGAFTKAVDMELDLS-----A----V----L-G----------------NVRSKRYSLVI-E 131 (167)
T ss_dssp HHHHHTTCTTTSEEEECTTSHHHHHTTCEECCH-----H----H----H-S----------------SCEECCEEEEE-E
T ss_pred HHHHhcCCCcceEEEECCCCcHHHHcCCccccc-----c----c----c-C----------------cccceEEEEEE-e
Confidence 999999999 9999999999999999864421 0 0 0 1 01245789999 7
Q ss_pred CCCeEEEEEeCCCCC--CCCCHHHHHHHh
Q 025441 224 GKSNISYIHRDKEAG--DDPDIQDILKAC 250 (252)
Q Consensus 224 ggg~I~~~h~~~~~~--D~~~~~eIL~al 250 (252)
+ |+|+|.+++.++. +-...+.+|+.+
T Consensus 132 ~-G~I~~~~~~~~~~~~~~~~~~~~~~~~ 159 (167)
T 2wfc_A 132 D-GVVTKVNVEPDGKGLTCSLAPNILSQL 159 (167)
T ss_dssp T-TEEEEEEECTTSSSSSTTSHHHHHHHH
T ss_pred C-CEEEEEEecCCCCcceeccHHHHHHHh
Confidence 7 6999999987654 335577777654
No 10
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.94 E-value=3.9e-26 Score=189.71 Aligned_cols=150 Identities=15% Similarity=0.189 Sum_probs=125.2
Q ss_pred ccccCCCCCcEEecC----CC-----CeEeCCCccCCCeEEEEEEcCCCCHhhHHH-HHHHHHhHHHHHhCCCE-EEEEe
Q 025441 69 EDTKNLLDTVKVYDV----NG-----NAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVA-LVLIG 137 (252)
Q Consensus 69 ~~~g~~apdf~L~d~----~G-----~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~e-l~~L~~~~~~~~~~Gv~-vVaVs 137 (252)
..+|+.+|+|++.|. +| +.++|+++++++++||+|||++|||+|+.| +++|++.+++|++.|++ ||+|+
T Consensus 7 ~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is 86 (171)
T 2pwj_A 7 TDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVA 86 (171)
T ss_dssp ---CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEE
T ss_pred ccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 456779999999998 57 899999976777899999999999999999 99999999999999999 99999
Q ss_pred cCCHHHHHHHHHHcCC--cceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCcccc
Q 025441 138 PGSVEQARTFSEQTKF--KGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 215 (252)
Q Consensus 138 ~d~~~~~~~f~~~~~l--~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~ 215 (252)
.++.+.+++|.+++++ +||+++|++.++.++||+..... . .++ | ....
T Consensus 87 ~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~-----~----------~~~---------g------~~~~ 136 (171)
T 2pwj_A 87 INDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLS-----A----------GLL---------G------IRSE 136 (171)
T ss_dssp SSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECT-----T----------TTC---------C------EEEC
T ss_pred CCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccc-----c----------ccC---------C------cccc
Confidence 9999999999999996 79999999999999999874321 0 000 0 0124
Q ss_pred ceEEEEeCCCCeEEEEEeCCCCCC--CCCHHHHHHHh
Q 025441 216 GGIIVAGPGKSNISYIHRDKEAGD--DPDIQDILKAC 250 (252)
Q Consensus 216 gg~fVid~ggg~I~~~h~~~~~~D--~~~~~eIL~al 250 (252)
+.+|+|+ + |+|+|.|++.++++ +.++++||++|
T Consensus 137 ~~t~~I~-~-G~I~~~~~~~~~~~~~~~~~~~il~~l 171 (171)
T 2pwj_A 137 RWSAYVV-D-GKVKALNVEESPSDVKVSGAETILGQI 171 (171)
T ss_dssp CEEEEEE-T-TEEEEEEECSSTTCCSSSSHHHHHHHC
T ss_pred eeEEEEE-C-CEEEEEEeecCCCCCcccCHHHHHhcC
Confidence 4688888 7 69999999988875 57899999875
No 11
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.94 E-value=6e-26 Score=186.76 Aligned_cols=147 Identities=12% Similarity=0.166 Sum_probs=127.2
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f 147 (252)
..++|+.+|+|++.|.+|+.++++++ +++++||.|++++|||+|+.++++|+++++++ .|+++|+|+.|+.+.+++|
T Consensus 20 ~l~~g~~~P~f~l~~~~G~~~~l~~~-~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~ 96 (171)
T 2yzh_A 20 ELKVGDRAPEAVVVTKDLQEKIVGGA-KDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQKRF 96 (171)
T ss_dssp CCCTTSBCCCEEEEETTSCEEEESSC-CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHH
T ss_pred cCCCCCcCCceEEECCCCCEeeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHHHHH
Confidence 36789999999999999999999998 45566666666999999999999999999988 7999999999999999999
Q ss_pred HHHcCC-cceeeec-CChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCC
Q 025441 148 SEQTKF-KGEVYAD-PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 225 (252)
Q Consensus 148 ~~~~~l-~fpllsD-p~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 225 (252)
++++++ +|++++| ++.++ ++||+..... + ..++..|.+||||++
T Consensus 97 ~~~~~~~~~~~l~D~~~~~~-~~~gv~~~~~----~----------------------------~~g~~~p~~~liD~~- 142 (171)
T 2yzh_A 97 CESFNIQNVTVASDFRYRDM-EKYGVLIGEG----A----------------------------LKGILARAVFIIDKE- 142 (171)
T ss_dssp HHHTTCCSSEEEECTTTCGG-GGGTCBBCSS----T----------------------------TTTSBCCEEEEECTT-
T ss_pred HHHcCCCCeEEeecCccCcH-HHhCCEeccc----c----------------------------cCCceeeEEEEEcCC-
Confidence 999999 9999999 88999 9999864321 0 001246789999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 226 SNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 226 g~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|+|++.|.+.+..+++++++++++++
T Consensus 143 G~i~~~~~~~~~~~~~~~~~ll~~l~ 168 (171)
T 2yzh_A 143 GKVAYVQLVPEITEEPNYDEVVNKVK 168 (171)
T ss_dssp SBEEEEEECSBTTSCCCCHHHHHHHH
T ss_pred CeEEEEEeCCCcCCCCCHHHHHHHHH
Confidence 69999999888889999999999886
No 12
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.94 E-value=2.7e-26 Score=199.39 Aligned_cols=146 Identities=10% Similarity=0.102 Sum_probs=126.0
Q ss_pred CccccCCCCCcE----EecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHH
Q 025441 68 SEDTKNLLDTVK----VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 68 ~~~~g~~apdf~----L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~ 143 (252)
..++|++||||+ +.|.+|+.|+|+++ +++++||.||+..|||.|..|+.+|++.+++|++.|++||+||.|+...
T Consensus 25 ~~~vG~~APdF~~~a~l~d~~g~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~s 103 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPNGSFKKISLSSY-KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYA 103 (219)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccccCCcCCCCcccccccCCCCcEEehHHh-CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhh
Confidence 358999999999 55888999999998 5679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccc
Q 025441 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 144 ~~~f~~~~-------~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 216 (252)
.++|+++. +++||+++|+++++.++||+..... +...+
T Consensus 104 h~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~-----------------------------------g~~~R 148 (219)
T 3tue_A 104 HLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQ-----------------------------------GVAYR 148 (219)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTT-----------------------------------TEECE
T ss_pred HHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCC-----------------------------------CeeEE
Confidence 99998764 6899999999999999999864311 13457
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 217 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 217 g~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|+||||++ |+|+|.++..... -..++|||++++
T Consensus 149 ~tFiIDp~-g~Ir~~~~~~~~~-gr~~~EvLr~l~ 181 (219)
T 3tue_A 149 GLFIIDPH-GMLRQITVNDMPV-GRSVEEVLRLLE 181 (219)
T ss_dssp EEEEECTT-SBEEEEEEECTTC-CCCHHHHHHHHH
T ss_pred EEEEECCC-CeEEEEEEecCCC-CCCHHHHHHHHH
Confidence 99999999 6999999764333 347889988875
No 13
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.1e-26 Score=197.85 Aligned_cols=145 Identities=14% Similarity=0.147 Sum_probs=126.4
Q ss_pred ccccCCCCCcEEe---cCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHH
Q 025441 69 EDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (252)
Q Consensus 69 ~~~g~~apdf~L~---d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~ 145 (252)
.++|++||||++. |.+|+.|+|+++ +++++||.||++.|||.|..|+++|++.+++|++.|++||+||.|+....+
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~ 101 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFDEVSLDKY-KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLL 101 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEEEECGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred hhcCCcCCCCCCcceECCCCcEEehHHh-CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHH
Confidence 6899999999975 777889999998 567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHc-------CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceE
Q 025441 146 TFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 218 (252)
Q Consensus 146 ~f~~~~-------~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~ 218 (252)
+|++.. +++||+++|+++++.++||+.... .+...+|+
T Consensus 102 aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~-----------------------------------~g~~~R~t 146 (216)
T 3sbc_A 102 AWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEE-----------------------------------EGVALRGL 146 (216)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETT-----------------------------------TTEECEEE
T ss_pred HHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeecc-----------------------------------CCceeeEE
Confidence 999765 589999999999999999986431 11346799
Q ss_pred EEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 219 IVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 219 fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
||||++ |+|+|.++.... .-..++|+|++++
T Consensus 147 FiID~~-G~Ir~~~v~~~~-~grn~dEiLr~l~ 177 (216)
T 3sbc_A 147 FIIDPK-GVIRHITINDLP-VGRNVDEALRLVE 177 (216)
T ss_dssp EEECTT-SBEEEEEEECTT-BCCCHHHHHHHHH
T ss_pred EEECCC-CeEEEEEEcCCC-CCCCHHHHHHHHH
Confidence 999999 699999987544 3458999998875
No 14
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.94 E-value=4.6e-26 Score=193.97 Aligned_cols=148 Identities=10% Similarity=0.121 Sum_probs=130.3
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f 147 (252)
..++|+.+|+|+|.|.+|+.++|+++ +++++||.|+++.||++|+.|++.|+++++++ .|++||+|+.|+.+.+++|
T Consensus 51 ~l~~G~~aPdf~l~d~~G~~v~L~d~-~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~~~~~~ 127 (200)
T 3zrd_A 51 LPQIGDKAKDFTLVAKDLSDVALSSF-AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQSRF 127 (200)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHHHHTTC
T ss_pred cCCCCCCCCCeEEECCCCCEEcHHHh-CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHHHHHHH
Confidence 36899999999999999999999998 45677777777899999999999999999999 7999999999999999999
Q ss_pred HHHcCC-cceeeecC-ChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCC
Q 025441 148 SEQTKF-KGEVYADP-NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 225 (252)
Q Consensus 148 ~~~~~l-~fpllsDp-~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 225 (252)
++++++ +|++++|+ +.++.++||+..... + . .+...+++||||++
T Consensus 128 ~~~~~~~~f~~l~D~~~~~~~~~ygv~~~~~----~---------------------~-------~g~~~p~~~lID~~- 174 (200)
T 3zrd_A 128 CGAEGLSNVITLSTLRGADFKQAYGVAITEG----P---------------------L-------AGLTARAVVVLDGQ- 174 (200)
T ss_dssp TTTTTCTTEEEEETTSCTHHHHHTTCEECSS----T---------------------T-------TTSBCCEEEEECTT-
T ss_pred HHHcCCCCceEEecCchHHHHHHhCceeecc----c---------------------C-------CCccccEEEEECCC-
Confidence 999999 99999999 999999999864321 0 0 01235789999999
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 226 SNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 226 g~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|+|+|.|+..+..+.++++++|++++
T Consensus 175 G~I~~~~~~~~~~~~~~~~~~l~~Lk 200 (200)
T 3zrd_A 175 DNVIYSELVNEITTEPNYDAALAALK 200 (200)
T ss_dssp SBEEEEEECSBTTSCCCHHHHHHHHC
T ss_pred CeEEEEEecCCcccCCCHHHHHHhhC
Confidence 69999999999999999999999985
No 15
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.94 E-value=3.3e-26 Score=190.72 Aligned_cols=152 Identities=11% Similarity=0.065 Sum_probs=127.6
Q ss_pred CCccccCC----CCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 67 VSEDTKNL----LDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 67 ~~~~~g~~----apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
..+++|+. +|+|+|.|.+|+.++|+++ +++++||+|++++||+.|+.+++.|++++++|++.|++||+|+.|+.+
T Consensus 19 ~~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~-~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~ 97 (179)
T 3ixr_A 19 SHMNIGDTLNHSLLNHPLMLSGSTCKTLSDY-TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVK 97 (179)
T ss_dssp CSSCTTCBCCHHHHHCCEEEGGGEEECGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHH
T ss_pred cccCcCcccCCcCCCeeEECCCCCEEeHHHH-CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence 34677777 9999999999999999998 456788888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEe
Q 025441 143 QARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 222 (252)
Q Consensus 143 ~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid 222 (252)
.+++|+++++++|++++|++.+++++||+..... .+ |.. .....+++||||
T Consensus 98 ~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~~-~~-------------------------g~~---~~~~~p~~~lID 148 (179)
T 3ixr_A 98 SHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEKT-MY-------------------------GRQ---VIGIERSTFLIG 148 (179)
T ss_dssp HHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEEC-CC---------------------------C---EEEECCEEEEEC
T ss_pred HHHHHHHHcCCceEEEECCchHHHHHcCCccccc-cc-------------------------Ccc---cCCcceEEEEEC
Confidence 9999999999999999999999999999875321 00 000 001367899999
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 223 PGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 223 ~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
++ |+|++.|. +......+++|+++++
T Consensus 149 ~~-G~I~~~~~--~~~~~~~~~~il~~l~ 174 (179)
T 3ixr_A 149 PT-HRIVEAWR--QVKVPGHAEEVLNKLK 174 (179)
T ss_dssp TT-SBEEEEEC--SCCSTTHHHHHHHHHH
T ss_pred CC-CEEEEEEc--CCCCCCCHHHHHHHHH
Confidence 99 69999994 4556677889988775
No 16
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.94 E-value=5.2e-26 Score=186.56 Aligned_cols=147 Identities=12% Similarity=0.178 Sum_probs=127.1
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~ 148 (252)
.++|+.+|+|++.|.+|+.++++++ +++++||.|+++.||++|+.|++.|+++++++ .|++||+|+.|+.+.+++|+
T Consensus 17 ~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~ 93 (165)
T 1q98_A 17 PQVGEIVENFILVGNDLADVALNDF-ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQARFC 93 (165)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHHTTCT
T ss_pred CCCCCCCCCeEEECCCCCEEehHHh-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHHHHHH
Confidence 5789999999999999999999998 45566666666999999999999999999998 79999999999999999999
Q ss_pred HHcCC-cceeeecC-ChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCC
Q 025441 149 EQTKF-KGEVYADP-NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 149 ~~~~l-~fpllsDp-~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg 226 (252)
+++++ +|++++|+ +.+++++||+..... +. .+...+.+||||++ |
T Consensus 94 ~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~----~~----------------------------~g~~~p~~~liD~~-G 140 (165)
T 1q98_A 94 GAEGIENAKTVSTFRNHALHSQLGVDIQTG----PL----------------------------AGLTSRAVIVLDEQ-N 140 (165)
T ss_dssp TTTTCTTEEEEECTTCTHHHHHTTCEECSS----TT----------------------------TTSBCCEEEEECTT-S
T ss_pred HHcCCCceEEeeccccchHHHHhCceeccc----cc----------------------------CCccceeEEEEcCC-C
Confidence 99999 79999998 899999999864210 00 01246789999998 6
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 227 NISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 227 ~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+|++.|.+.+..++++++++|++++
T Consensus 141 ~i~~~~~~~~~~~~~~~~~~l~~l~ 165 (165)
T 1q98_A 141 NVLHSQLVEEIKEEPNYEAALAVLA 165 (165)
T ss_dssp BEEEEEECSBTTSCCCHHHHHHTTC
T ss_pred EEEEEEeCCCCCCCCCHHHHHHhhC
Confidence 9999999888999999999999874
No 17
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.93 E-value=3e-25 Score=180.85 Aligned_cols=143 Identities=15% Similarity=0.124 Sum_probs=123.7
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCe-EEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRK-AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~-vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f 147 (252)
.++|+.+|+|++.|.+|+.++++++. +++ +||.|++++|||+|+.+++.|+++++++++.|+++|+|+.|+.+.+++|
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~~-gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~ 80 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDYI-GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRF 80 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGTT-TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHH
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHhc-CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHH
Confidence 46899999999999999999999984 444 6666666999999999999999999999999999999999999999999
Q ss_pred HHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCCe
Q 025441 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 227 (252)
+++++++|++++|++..++++||+... ....|.+||||++ |+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~~~-------------------------------------~~~~P~~~lid~~-G~ 122 (161)
T 3drn_A 81 KEKYKLPFILVSDPDKKIRELYGAKGF-------------------------------------ILPARITFVIDKK-GI 122 (161)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCCCS-------------------------------------SSCCCEEEEECTT-SB
T ss_pred HHHhCCCceEEECCcHHHHHHcCCCCc-------------------------------------CcccceEEEECCC-CE
Confidence 999999999999999999999987621 0236789999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 228 ISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 228 I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|++.+.+. ......+++++++++
T Consensus 123 i~~~~~g~-~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 123 IRHIYNSQ-MNPANHVNEALKALK 145 (161)
T ss_dssp EEEEEECS-SCTTHHHHHHHHHHH
T ss_pred EEEEEecC-CCCCcCHHHHHHHHH
Confidence 99999873 344567888888775
No 18
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.93 E-value=1.7e-25 Score=189.11 Aligned_cols=151 Identities=11% Similarity=0.115 Sum_probs=128.9
Q ss_pred cccCCCCCcEEec--C---------CC----CeEeCCCccCCCeEEEEEEcCCCCHhhH-HHHHHHHHhHHHH-HhCCCE
Q 025441 70 DTKNLLDTVKVYD--V---------NG----NAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVM-DASGVA 132 (252)
Q Consensus 70 ~~g~~apdf~L~d--~---------~G----~~v~ls~l~~~~~vVLvF~R~~~Cp~C~-~el~~L~~~~~~~-~~~Gv~ 132 (252)
++|+.+|+|+|.+ . +| +.++|+++++++++||+||++.|||.|. .|++.|++.+++| ++.|++
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 6799999999998 4 67 7999999778889999999999999999 9999999999999 999995
Q ss_pred -EEEEecCCHHHHHHHHHHcCC-cceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCC
Q 025441 133 -LVLIGPGSVEQARTFSEQTKF-KGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSR 210 (252)
Q Consensus 133 -vVaVs~d~~~~~~~f~~~~~l-~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g 210 (252)
|++||.|++..+++|+++.++ +|++++|+++++.++||+..... . .|+
T Consensus 82 ~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~~~~-----~----------~G~--------------- 131 (182)
T 1xiy_A 82 DIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKS-----N----------FFM--------------- 131 (182)
T ss_dssp EEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCEEECG-----G----------GTC---------------
T ss_pred EEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCceecc-----c----------cCC---------------
Confidence 999999999999999999999 69999999999999999874321 0 010
Q ss_pred CccccceEEEEeCCCCeEEEEEeCCCCCC--------CCCHHHHHHHhhC
Q 025441 211 GGWQQGGIIVAGPGKSNISYIHRDKEAGD--------DPDIQDILKACCS 252 (252)
Q Consensus 211 ~~~q~gg~fVid~ggg~I~~~h~~~~~~D--------~~~~~eIL~al~~ 252 (252)
+....+++|||| + |+|+|.++..++.+ +.++++||++|++
T Consensus 132 g~~~~R~tfvId-d-G~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 132 GMRPWRFVAIVE-N-NILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp CEEECCEEEEEE-T-TEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred CCceEEEEEEEc-C-CEEEEEEEeCCcccccccCcccCCCHHHHHHHHHh
Confidence 012356799998 7 69999999877754 7899999999874
No 19
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.93 E-value=1.9e-25 Score=188.08 Aligned_cols=152 Identities=13% Similarity=0.130 Sum_probs=128.0
Q ss_pred ccccCCCCCcEEecCCC----------CeEeCCCccCCCeEEEEEEcCCCCHhhHH-HHHHHHHhHHHHHhCCC-EEEEE
Q 025441 69 EDTKNLLDTVKVYDVNG----------NAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGV-ALVLI 136 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G----------~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~-el~~L~~~~~~~~~~Gv-~vVaV 136 (252)
.++|+++|++++.-.++ +.++|+++++++++||+|||+.|||.|.. |++.|++.+++|+++|+ +|++|
T Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigI 89 (176)
T 4f82_A 10 IQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCV 89 (176)
T ss_dssp CCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 58999999988754322 68999998788899999999999999999 99999999999999999 99999
Q ss_pred ecCCHHHHHHHHHHcCCc--ceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccc
Q 025441 137 GPGSVEQARTFSEQTKFK--GEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQ 214 (252)
Q Consensus 137 s~d~~~~~~~f~~~~~l~--fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q 214 (252)
|.|++...++|+++.+++ |++++|++.++.++||+..... . .|+ +...
T Consensus 90 S~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~~~-----~----------~G~---------------g~~s 139 (176)
T 4f82_A 90 SVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLS-----A----------RGM---------------GIRS 139 (176)
T ss_dssp ESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECG-----G----------GTC---------------CEEE
T ss_pred eCCCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCcccc-----c----------cCC---------------Cccc
Confidence 999999999999999999 9999999999999999875421 0 010 0123
Q ss_pred cceEEEEeCCCCeEEEEEeCCCC-CCCCCHHHHHHHhhC
Q 025441 215 QGGIIVAGPGKSNISYIHRDKEA-GDDPDIQDILKACCS 252 (252)
Q Consensus 215 ~gg~fVid~ggg~I~~~h~~~~~-~D~~~~~eIL~al~~ 252 (252)
.+++||| ++ |+|+|.+++... .+..+.+++|++|+|
T Consensus 140 ~R~tfII-~d-G~I~~~~~~~~~~~~~~~a~~vL~~Lk~ 176 (176)
T 4f82_A 140 LRYAMVI-DG-GVVKTLAVEAPGKFEVSDAASVLATLTS 176 (176)
T ss_dssp CCEEEEE-ET-TEEEEEEECCTTCCSSSSHHHHHHTCCC
T ss_pred ccEEEEE-cC-CEEEEEEEcCCCCcchhhHHHHHHHhhC
Confidence 5789999 78 699999998622 245689999999886
No 20
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.93 E-value=3.2e-25 Score=193.31 Aligned_cols=145 Identities=11% Similarity=0.092 Sum_probs=127.1
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhH-----HHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~-----~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
.+++|+.+|+|+|.|.+|+.++|+++ .++++||+||+..|||+|. .|++.|++. | .|+.||+||.|+++
T Consensus 21 ~l~vG~~APdFtL~d~~G~~vsLsd~-~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~Ds~~ 94 (224)
T 3keb_A 21 FPRKGDYLPSFMLVDDQKHDAALESF-SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVDSPS 94 (224)
T ss_dssp CCCTTCBCCCCEEEETTSCEEEGGGG-TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESSCHH
T ss_pred cCCCCCCCCCeEEECCCCCEEeHHHh-CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECCCHH
Confidence 36899999999999999999999996 5677888888888899999 999999988 4 79999999999999
Q ss_pred HHHHHHHHcCC-cceeeecC-ChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEE
Q 025441 143 QARTFSEQTKF-KGEVYADP-NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 220 (252)
Q Consensus 143 ~~~~f~~~~~l-~fpllsDp-~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fV 220 (252)
.+++|++++++ +|++++|+ +.++.++||+..... |. .++..+++||
T Consensus 95 ~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~----~~----------------------------~G~~~p~tfv 142 (224)
T 3keb_A 95 SLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEY----PL----------------------------SGYTSPAIIL 142 (224)
T ss_dssp HHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCST----TS----------------------------TTCBCCEEEE
T ss_pred HHHHHHHHcCCCCceEEEcCCchHHHHHhCCccccc----cc----------------------------cCCccCEEEE
Confidence 99999999999 69999999 699999999874321 00 0134679999
Q ss_pred EeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 221 AGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 221 id~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
||++ |+|+|.++..++.++|+++++|++++
T Consensus 143 ID~d-G~I~~~~~~~~~~~~pd~~evl~~L~ 172 (224)
T 3keb_A 143 ADAA-NVVHYSERLANTRDFFDFDAIEKLLQ 172 (224)
T ss_dssp ECTT-CBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred EcCC-CEEEEEEecCCCCCCCCHHHHHHHHH
Confidence 9999 69999999999999999999999986
No 21
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.93 E-value=7e-26 Score=189.87 Aligned_cols=152 Identities=13% Similarity=0.049 Sum_probs=127.3
Q ss_pred CccccCCCCCcEEecCCC-CeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCE-EEEEecCCHHHHH
Q 025441 68 SEDTKNLLDTVKVYDVNG-NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQAR 145 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G-~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~-vVaVs~d~~~~~~ 145 (252)
..++|+.+|+|+|.+.++ +.++|+++++++++||+||++.|||.|..|++.+++.+++|++.|++ |++||.|++...+
T Consensus 13 ~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~ 92 (171)
T 2xhf_A 13 PIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMA 92 (171)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHH
T ss_pred cccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHH
Confidence 479999999999995432 89999997788899999999999999999999999999999999996 9999999999999
Q ss_pred HHHHHcCC--cceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeC
Q 025441 146 TFSEQTKF--KGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 146 ~f~~~~~l--~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ 223 (252)
+|+++.++ +|++++|+++++.++||+..... . . |. | ....+++||||
T Consensus 93 ~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~-----~---------~-g~---------g------~~~~R~tfvId- 141 (171)
T 2xhf_A 93 AWGKTVDPEHKIRMLADMHGEFTRALGTELDSS-----K---------M-LG---------N------NRSRRYAMLID- 141 (171)
T ss_dssp HHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCH-----H---------H-HS---------S------CCBCCEEEEEE-
T ss_pred HHHHhcCCCCCeEEEEeCCchHHHHhCCceecc-----c---------c-CC---------C------cceEEEEEEEe-
Confidence 99999999 99999999999999999875421 0 0 10 0 12456899998
Q ss_pred CCCeEEEEEeCCCCC--CCCCHHHHHHHhh
Q 025441 224 GKSNISYIHRDKEAG--DDPDIQDILKACC 251 (252)
Q Consensus 224 ggg~I~~~h~~~~~~--D~~~~~eIL~al~ 251 (252)
+ |+|+|.++..+++ .+.++++||++++
T Consensus 142 d-G~V~~~~v~~~~~~~~~s~a~~vL~~~~ 170 (171)
T 2xhf_A 142 D-NKIRSVSTEPDITGLACLLSIQRQKENK 170 (171)
T ss_dssp T-TEEEEEEETTSCSHHHHHHHHHHC----
T ss_pred C-CEEEEEEEeCCCCcccCCCHHHHHHHhc
Confidence 7 6999999988776 4567899999875
No 22
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.93 E-value=8.2e-25 Score=189.82 Aligned_cols=151 Identities=14% Similarity=0.104 Sum_probs=127.5
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~ 148 (252)
..+|+.+|+|++.|.+| .++|+++.+++++||+|||+.|||+|+.|+++|++++++|++.|++||+||.|+.+.+++|.
T Consensus 5 l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~ 83 (224)
T 1prx_A 5 LLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWS 83 (224)
T ss_dssp CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH
T ss_pred CCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 57899999999999999 99999996655899999999999999999999999999999999999999999998888998
Q ss_pred HH----------cCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceE
Q 025441 149 EQ----------TKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 218 (252)
Q Consensus 149 ~~----------~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~ 218 (252)
++ .+++||+++|++++++++||+..... . . + .+.....+++
T Consensus 84 ~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~--~--~----------------------~---~g~~~~~p~~ 134 (224)
T 1prx_A 84 KDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAE--K--D----------------------E---KGMPVTARVV 134 (224)
T ss_dssp HHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCT--T--C----------------------S---SSCCTTCCEE
T ss_pred HHHHHhhCcccccCcCcceeecCchHHHHHhCCCCccc--c--c----------------------C---CCccccceEE
Confidence 87 78999999999999999999864311 0 0 0 0112347899
Q ss_pred EEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 219 IVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 219 fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
||||++ |+|++.+.......+ +.++|+++++
T Consensus 135 fiID~~-G~I~~~~~~~~~~gr-~~~eil~~i~ 165 (224)
T 1prx_A 135 FVFGPD-KKLKLSILYPATTGR-NFDEILRVVI 165 (224)
T ss_dssp EEECTT-SBEEEEEECCTTBCC-CHHHHHHHHH
T ss_pred EEECCC-CEEEEEEecCCCCCC-CHHHHHHHHH
Confidence 999999 699999987544333 6889988775
No 23
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.92 E-value=9.2e-25 Score=189.64 Aligned_cols=151 Identities=13% Similarity=0.154 Sum_probs=129.0
Q ss_pred ccccCCCCCcEEecC-CCC--eEeCCCccCCCeEEEEEEcCCCCHhhH-HHHHHHHHhHHHHHhCCC-EEEEEecCCHHH
Q 025441 69 EDTKNLLDTVKVYDV-NGN--AIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGV-ALVLIGPGSVEQ 143 (252)
Q Consensus 69 ~~~g~~apdf~L~d~-~G~--~v~ls~l~~~~~vVLvF~R~~~Cp~C~-~el~~L~~~~~~~~~~Gv-~vVaVs~d~~~~ 143 (252)
.++|+.+|+|++.|. +|+ .++|+++++++++||.|||++|||+|+ .|++.|++++++|++.|+ +||+|+.|+.+.
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~ 82 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFV 82 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHH
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHH
Confidence 478999999999996 777 999999546778888888899999999 999999999999999999 999999999999
Q ss_pred HHHHHHHcCCc-ceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEe
Q 025441 144 ARTFSEQTKFK-GEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 222 (252)
Q Consensus 144 ~~~f~~~~~l~-fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid 222 (252)
+++|.++++++ |++++|++.++.++||+..... . .|+ +....|++|||
T Consensus 83 ~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~-----~----------~g~---------------~~~~~p~t~li- 131 (241)
T 1nm3_A 83 MNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKE-----D----------LGF---------------GKRSWRYSMLV- 131 (241)
T ss_dssp HHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECT-----T----------TTC---------------CEEECCEEEEE-
T ss_pred HHHHHHhcCCCceEEEECCCcHHHHHhCceeecc-----c----------ccC---------------cccceeEEEEE-
Confidence 99999999997 9999999999999999864321 0 010 00146789999
Q ss_pred CCCCeEEEEEeCCCCCCC----CCHHHHHHHhh
Q 025441 223 PGKSNISYIHRDKEAGDD----PDIQDILKACC 251 (252)
Q Consensus 223 ~ggg~I~~~h~~~~~~D~----~~~~eIL~al~ 251 (252)
++ |+|+|.|.+..+.++ .+++++|++++
T Consensus 132 ~~-G~i~~~~~~~~~~~~~~~~~~~~~il~~l~ 163 (241)
T 1nm3_A 132 KN-GVVEKMFIEPNEPGDPFKVSDADTMLKYLA 163 (241)
T ss_dssp ET-TEEEEEEECCSCSSCCCSSSSHHHHHHHHC
T ss_pred EC-CEEEEEEEeccCCCccceecCHHHHHHHhh
Confidence 88 699999999877766 78999999876
No 24
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.92 E-value=2.1e-24 Score=174.42 Aligned_cols=146 Identities=14% Similarity=0.166 Sum_probs=126.2
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~ 148 (252)
..+|+.+|+|++.|.+|+.++++++.+++++||.|+|++||++|+.+++.|+++++++++.|+++|+|+.|+.+.+++|.
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~ 88 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWA 88 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHH
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHH
Confidence 68899999999999999999999984333677777679999999999999999999998889999999999999999999
Q ss_pred HHcCCcceeeecC--ChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCC
Q 025441 149 EQTKFKGEVYADP--NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 149 ~~~~l~fpllsDp--~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg 226 (252)
++++++|++++|. +..+++.||+.... .+++.+.+||||++ |
T Consensus 89 ~~~~~~~~~~~d~~~~~~~~~~~~v~~~~-----------------------------------~~~p~~~~~lid~~-G 132 (160)
T 1xvw_A 89 TQSGFTFPLLSDFWPHGAVSQAYGVFNEQ-----------------------------------AGIANRGTFVVDRS-G 132 (160)
T ss_dssp HHHTCCSCEEECTTTTTHHHHHTTCEETT-----------------------------------TTEECSEEEEECTT-S
T ss_pred HhcCCCceEEecCCcChHHHHHcCCcccc-----------------------------------CCCeeeeEEEECCC-C
Confidence 9999999999995 89999999876321 01223489999998 6
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 227 NISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 227 ~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+|++.|.+. ..+.+++++++++++
T Consensus 133 ~i~~~~~g~-~~~~~~~~~l~~~l~ 156 (160)
T 1xvw_A 133 IIRFAEMKQ-PGEVRDQRLWTDALA 156 (160)
T ss_dssp BEEEEEECC-TTCCCCHHHHHHHHH
T ss_pred eEEEEEecC-CCCCCCHHHHHHHHH
Confidence 999999985 667789999998875
No 25
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.92 E-value=1.6e-24 Score=187.70 Aligned_cols=148 Identities=9% Similarity=0.062 Sum_probs=124.0
Q ss_pred CCCccccCCCCCcEEecC--CC--CeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH
Q 025441 66 SVSEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 66 ~~~~~~g~~apdf~L~d~--~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~ 141 (252)
|...++|+.+|+|++.|. +| +.++++++++++++||.|++++|||+|+.+++.|++++++|++.|++||+|+.|+.
T Consensus 22 M~~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~ 101 (221)
T 2c0d_A 22 MKLSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSV 101 (221)
T ss_dssp ----CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCH
T ss_pred cccCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 445689999999999998 99 99999998556666666655999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc-------CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccc
Q 025441 142 EQARTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQ 214 (252)
Q Consensus 142 ~~~~~f~~~~-------~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q 214 (252)
+.+++|++++ +++|++++|++.++.++||+. ... +..
T Consensus 102 ~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~-~~~-----------------------------------g~~ 145 (221)
T 2c0d_A 102 YSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL-YDN-----------------------------------SFA 145 (221)
T ss_dssp HHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE-ETT-----------------------------------TEE
T ss_pred HHHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc-ccC-----------------------------------CCc
Confidence 9999999998 789999999999999999986 310 023
Q ss_pred cceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 215 QGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 215 ~gg~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
.+.+||||++ |+|+|.+.+.. ...++.++|+++++
T Consensus 146 ~P~~~lID~~-G~I~~~~~g~~-~~~~~~~ell~~l~ 180 (221)
T 2c0d_A 146 LRGLFIIDKN-GCVRHQTVNDL-PIGRNVQEVLRTID 180 (221)
T ss_dssp CEEEEEECTT-SBEEEEEEECT-TCCCCHHHHHHHHH
T ss_pred cceEEEECCC-CeEEEEEecCC-CCCCCHHHHHHHHH
Confidence 6789999998 69999998754 34568889988765
No 26
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.92 E-value=1.7e-24 Score=181.57 Aligned_cols=144 Identities=16% Similarity=0.147 Sum_probs=120.4
Q ss_pred cccCCCCCcEEecC-CC--CeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHH
Q 025441 70 DTKNLLDTVKVYDV-NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (252)
Q Consensus 70 ~~g~~apdf~L~d~-~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~ 146 (252)
++|+.+|+|++.|. +| +.++++++ +++++||.||+++|||+|+.|+++|++++++|++.|++||+|+.|+.+.+++
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~-~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~ 80 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDT-EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKA 80 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHH-TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHH-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH
Confidence 57999999999999 59 89999998 4455555554579999999999999999999999999999999999999999
Q ss_pred HHHHc----CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEe
Q 025441 147 FSEQT----KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 222 (252)
Q Consensus 147 f~~~~----~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid 222 (252)
|++++ +++|++++|++.+++++||+..... ++..+.+||||
T Consensus 81 ~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~-----------------------------------g~~~p~~~lID 125 (186)
T 1n8j_A 81 WHSSSETIAKIKYAMIGDPTGALTRNFDNMREDE-----------------------------------GLADRATFVVD 125 (186)
T ss_dssp HHHHCTTGGGCCSEEEECTTSHHHHHTTCEETTT-----------------------------------TEECEEEEEEC
T ss_pred HHHHcCcccCCceeEEECCchHHHHHhCCccCCC-----------------------------------CceeeEEEEEC
Confidence 99999 8999999999999999999764210 12367899999
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 223 PGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 223 ~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
++ |+|++.|.+.... ..+.++++++++
T Consensus 126 ~~-G~i~~~~~~~~~~-~~~~~~l~~~l~ 152 (186)
T 1n8j_A 126 PQ-GIIQAIEVTAEGI-GRDASDLLRKIK 152 (186)
T ss_dssp TT-SBEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred CC-CeEEEEEecCCCC-CCCHHHHHHHHH
Confidence 98 6999999875432 236788887765
No 27
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.92 E-value=2e-24 Score=188.89 Aligned_cols=151 Identities=11% Similarity=0.092 Sum_probs=125.4
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~ 148 (252)
+.+|+.+|+|++.|.+| .++|+++.+++++||+||++.|||+|+.|+++|++++++|++.|++||+||.|+.+.+++|+
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~ 81 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWS 81 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Confidence 57899999999999999 99999986544777777789999999999999999999999999999999999999899999
Q ss_pred H------Hc--CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEE
Q 025441 149 E------QT--KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 220 (252)
Q Consensus 149 ~------~~--~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fV 220 (252)
+ ++ +++||+++|++++++++||+..... . . + .+.....+++||
T Consensus 82 ~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~--~--~----------------------~---~g~~~~~p~~fi 132 (233)
T 2v2g_A 82 EDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDE--R--T----------------------S---TGMPLTCRAVFI 132 (233)
T ss_dssp HHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEE--E--C----------------------T---TCCEEECEEEEE
T ss_pred HHHHHhhCcccCCceEEEECChHHHHHHhCCcCccc--c--c----------------------C---CCcccccceEEE
Confidence 8 57 8999999999999999999864311 0 0 0 011235789999
Q ss_pred EeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 221 AGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 221 id~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
||++ |+|++.+.......+ +.+|||++++
T Consensus 133 ID~~-G~I~~~~~~~~~~gr-~~~eilr~l~ 161 (233)
T 2v2g_A 133 IGPD-KKLKLSILYPATTGR-NFSEILRVID 161 (233)
T ss_dssp ECTT-SBEEEEEEECTTBCC-CHHHHHHHHH
T ss_pred ECCC-CEEEEEEecCCCCCC-CHHHHHHHHH
Confidence 9999 699999986543333 6889988775
No 28
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.92 E-value=2.5e-24 Score=186.33 Aligned_cols=151 Identities=10% Similarity=0.042 Sum_probs=125.2
Q ss_pred ccccCCCCCcEEecC--CCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHH
Q 025441 69 EDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (252)
Q Consensus 69 ~~~g~~apdf~L~d~--~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~ 146 (252)
+.+|+.+|+|++.|. +| .++|+++.+++++||+|||+.|||.|+.|+++|++++++|++.|++||+||.|+.+.+++
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~ 81 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDK 81 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHH
Confidence 578999999999999 99 999999854447999999999999999999999999999999999999999999988888
Q ss_pred HHH-------HcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEE
Q 025441 147 FSE-------QTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGII 219 (252)
Q Consensus 147 f~~-------~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~f 219 (252)
|.+ +.+++||+++|+++++.++||+..... +. + .+.....+++|
T Consensus 82 ~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~----~~----------------------~---~g~~~~~p~~f 132 (220)
T 1xcc_A 82 WIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQE----KD----------------------I---TGLPLTCRCLF 132 (220)
T ss_dssp HHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEE----EC----------------------T---TSCEEECEEEE
T ss_pred HHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCccc----cc----------------------C---CCCCcccceEE
Confidence 887 578999999999999999999864311 00 0 00113478999
Q ss_pred EEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 220 VAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 220 Vid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|||++ |+|++.+....... .+.++|+++++
T Consensus 133 lID~~-G~I~~~~~~~~~~g-~~~~ell~~i~ 162 (220)
T 1xcc_A 133 FISPE-KKIKATVLYPATTG-RNAHEILRVLK 162 (220)
T ss_dssp EECTT-SBEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred EECCC-CEEEEEEecCCCCC-CCHHHHHHHHH
Confidence 99999 69999998644333 37888888765
No 29
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.91 E-value=2.1e-24 Score=175.33 Aligned_cols=132 Identities=8% Similarity=0.135 Sum_probs=112.9
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCe-EEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRK-AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~-vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~ 146 (252)
..++|+.+|+|++.|.+|+.++++++.++++ +||.||+++|||.|+.+++.|+++++++++.| +||+|+.|+.+.+++
T Consensus 6 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~ 84 (159)
T 2a4v_A 6 ELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKK 84 (159)
T ss_dssp CCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHH
T ss_pred cCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHH
Confidence 4688999999999999999999999965444 55555679999999999999999999999999 999999999999999
Q ss_pred HHHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCC
Q 025441 147 FSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 147 f~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg 226 (252)
|+++++++|++++|++.+++++||+... |. .| ..+.+||| ++ |
T Consensus 85 ~~~~~~~~~~~l~D~~~~~~~~~gv~~~------p~---------------------~g--------~~~~~~li-~~-G 127 (159)
T 2a4v_A 85 FQSKQNLPYHLLSDPKREFIGLLGAKKT------PL---------------------SG--------SIRSHFIF-VD-G 127 (159)
T ss_dssp HHHHHTCSSEEEECTTCHHHHHHTCBSS------SS---------------------SC--------BCCEEEEE-ET-T
T ss_pred HHHHhCCCceEEECCccHHHHHhCCccc------cc---------------------CC--------ccceEEEE-cC-C
Confidence 9999999999999999999999997632 10 01 24579999 88 6
Q ss_pred eEEEEEeCCCC
Q 025441 227 NISYIHRDKEA 237 (252)
Q Consensus 227 ~I~~~h~~~~~ 237 (252)
+|++.|.+..+
T Consensus 128 ~i~~~~~g~~~ 138 (159)
T 2a4v_A 128 KLKFKRVKISP 138 (159)
T ss_dssp EEEEEEESCCH
T ss_pred EEEEEEccCCc
Confidence 99999986443
No 30
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.91 E-value=1.3e-23 Score=180.40 Aligned_cols=146 Identities=10% Similarity=0.063 Sum_probs=124.8
Q ss_pred CccccCCCCCcEEecC--CC--CeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHH
Q 025441 68 SEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~--~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~ 143 (252)
...+|+.+|+|++.|. +| +.++++++++++++||.|+++.|||+|+.+++.|++++++|++.|++||+|+.|+.+.
T Consensus 20 ~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~ 99 (213)
T 2i81_A 20 PTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYT 99 (213)
T ss_dssp CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHH
T ss_pred cccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 4688999999999998 89 8999999855667666666699999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccc
Q 025441 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 144 ~~~f~~~~-------~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 216 (252)
+++|+++. +++||+++|++.+++++||+... . +...+
T Consensus 100 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~-~-----------------------------------g~~~p 143 (213)
T 2i81_A 100 HLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFD-D-----------------------------------SVSLR 143 (213)
T ss_dssp HHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEET-T-----------------------------------TEECE
T ss_pred HHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCccc-c-----------------------------------CCccc
Confidence 99999988 89999999999999999997641 0 02367
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 217 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 217 g~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
++||||++ |+|+|.+.+.... ..+.++++++++
T Consensus 144 ~~~lID~~-G~i~~~~~~~~~~-~~~~~ell~~l~ 176 (213)
T 2i81_A 144 AFVLIDMN-GIVQHLLVNNLAI-GRSVDEILRIID 176 (213)
T ss_dssp EEEEECTT-SBEEEEEEECTTC-CCCHHHHHHHHH
T ss_pred EEEEECCC-CEEEEEEecCCCC-CCCHHHHHHHHH
Confidence 89999998 6999999875433 347888888764
No 31
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.91 E-value=9.3e-24 Score=181.07 Aligned_cols=146 Identities=9% Similarity=0.026 Sum_probs=120.3
Q ss_pred CccccCCCCCcEEecC---CCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHH
Q 025441 68 SEDTKNLLDTVKVYDV---NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~---~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~ 144 (252)
...+|+.+|+|++.|. +|+.++|+++ +++++||.|++++|||+|+.|++.|++++++|++.|++||+|+.|+.+.+
T Consensus 18 ~~~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 96 (211)
T 2pn8_A 18 LYFQSMPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTH 96 (211)
T ss_dssp -CCSSCBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cCCCCCcCCCeEeecccCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 4688999999999874 5689999998 44555555555999999999999999999999999999999999999999
Q ss_pred HHHHHHc-------CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccce
Q 025441 145 RTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 145 ~~f~~~~-------~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 217 (252)
++|++++ +++||+++|++.++.++||+..... +...+.
T Consensus 97 ~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~-----------------------------------g~~~p~ 141 (211)
T 2pn8_A 97 LAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDS-----------------------------------GHTLRG 141 (211)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTT-----------------------------------TEECEE
T ss_pred HHHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCC-----------------------------------Ccccce
Confidence 9999988 7899999999999999999763210 123678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+||||++ |+|+|.+.+.... ..+.++++++++
T Consensus 142 ~~lID~~-G~I~~~~~g~~~~-~~~~~ell~~l~ 173 (211)
T 2pn8_A 142 LFIIDDK-GILRQITLNDLPV-GRSVDETLRLVQ 173 (211)
T ss_dssp EEEECTT-SBEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred EEEECCC-CEEEEEEecCCCC-CCCHHHHHHHHH
Confidence 9999998 6999999874332 247788887764
No 32
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.91 E-value=9.5e-24 Score=174.83 Aligned_cols=146 Identities=14% Similarity=0.118 Sum_probs=120.2
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCC-CHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFG-CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~-Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~ 146 (252)
...+|+.+|+|++.|.+|+.++++++ ++ +.+|++||++| |++|+.+++.|++++++ .|+++|+|+.|+.+.+++
T Consensus 17 ~l~~G~~~P~f~l~~~~G~~v~l~~~-~g-k~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~~~~~~ 91 (175)
T 1xvq_A 17 LPAVGSPAPAFTLTGGDLGVISSDQF-RG-KSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLPFAQKR 91 (175)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TT-SCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCHHHHTT
T ss_pred CCCcCCcCCCeEEECCCCCEEeHHHc-CC-CEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCHHHHHH
Confidence 35789999999999999999999998 44 45666667777 99999999999999887 789999999999999999
Q ss_pred HHHHcCC-cceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCC
Q 025441 147 FSEQTKF-KGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 225 (252)
Q Consensus 147 f~~~~~l-~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 225 (252)
|++++++ +|++++|++..++++||+..... + ..+...|.+||||++
T Consensus 92 ~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~----~----------------------------~~g~~~p~~~lid~~- 138 (175)
T 1xvq_A 92 FCGAEGTENVMPASAFRDSFGEDYGVTIADG----P----------------------------MAGLLARAIVVIGAD- 138 (175)
T ss_dssp CC------CEEEEECTTSSHHHHTTCBBCSS----T----------------------------TTTSBCSEEEEECTT-
T ss_pred HHHHcCCCCceEeeCCHHHHHHHhCCccccc----c----------------------------cCCcccceEEEECCC-
Confidence 9999999 89999999999999999864311 0 011346789999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 226 SNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 226 g~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|+|++.+......+.++++++|+++.
T Consensus 139 G~I~~~~~g~~~~~~~~~~~~l~~l~ 164 (175)
T 1xvq_A 139 GNVAYTELVPEIAQEPNYEAALAALG 164 (175)
T ss_dssp SBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred CeEEEEEECCCcCCCCCHHHHHHHHH
Confidence 69999999777888999999999875
No 33
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.91 E-value=4.9e-24 Score=173.95 Aligned_cols=144 Identities=13% Similarity=0.106 Sum_probs=125.4
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCC-CHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFG-CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~-Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~ 146 (252)
..++|+.+|+|++.|.+|+.++++++ + ++.+|++||++| |++|+.+++.|+++++++ .|+++|+|+.|+.+.+++
T Consensus 17 ~~~~G~~~p~f~l~~~~G~~~~l~~~-~-gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~~~ 92 (167)
T 2jsy_A 17 EVKVGDQAPDFTVLTNSLEEKSLADM-K-GKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQAR 92 (167)
T ss_dssp CCCTTSCCCCCEEEBTTCCEEEHHHH-T-TSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGTSC
T ss_pred ccCCCCcCCceEEECCCCCEeeHHHh-C-CCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHHHH
Confidence 36889999999999999999999998 3 345666777887 999999999999999999 899999999999888999
Q ss_pred HHHHcCC-cceeeec-CChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCC
Q 025441 147 FSEQTKF-KGEVYAD-PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 224 (252)
Q Consensus 147 f~~~~~l-~fpllsD-p~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~g 224 (252)
|.+++++ +|++++| ++.++.++||+.... .+...|.+||||++
T Consensus 93 ~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~-----------------------------------~g~~~p~~~lid~~ 137 (167)
T 2jsy_A 93 WCGANGIDKVETLSDHRDMSFGEAFGVYIKE-----------------------------------LRLLARSVFVLDEN 137 (167)
T ss_dssp CGGGSSCTTEEEEEGGGTCHHHHHTTCBBTT-----------------------------------TCSBCCEEEEECTT
T ss_pred HHHhcCCCCceEeeCCchhHHHHHhCCcccc-----------------------------------CCceeeEEEEEcCC
Confidence 9999999 9999999 899999999875321 01235789999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 225 KSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 225 gg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|+|++.|.+.+..++++.++++++++
T Consensus 138 -G~i~~~~~g~~~~~~~~~~~l~~~l~ 163 (167)
T 2jsy_A 138 -GKVVYAEYVSEATNHPNYEKPIEAAK 163 (167)
T ss_dssp -SCEEEEEECSBTTSCCCSHHHHHHHH
T ss_pred -CcEEEEEecCCcCCCCCHHHHHHHHH
Confidence 69999999988899999999998875
No 34
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.90 E-value=1.5e-23 Score=185.43 Aligned_cols=147 Identities=9% Similarity=0.048 Sum_probs=123.8
Q ss_pred CCccccCCCCCcEEe---cCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHH
Q 025441 67 VSEDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 67 ~~~~~g~~apdf~L~---d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~ 143 (252)
....+|+.+|+|++. |.+|+.++|+++ +++++||+|+++.||++|+.|+++|++++++|++.|++||+|+.|+.+.
T Consensus 60 ~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~-kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~ 138 (254)
T 3tjj_A 60 SKAKISKPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFT 138 (254)
T ss_dssp CCCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCCCCCCcEeeeecCCCCcEEeHHHH-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHH
Confidence 346799999999976 557889999998 5567777777799999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccc
Q 025441 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 144 ~~~f~~~~-------~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 216 (252)
.++|+++. +++||+++|++.+++++||+..... +...+
T Consensus 139 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~-----------------------------------g~~~p 183 (254)
T 3tjj_A 139 HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDS-----------------------------------GHTLR 183 (254)
T ss_dssp HHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTT-----------------------------------TEECE
T ss_pred HHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccC-----------------------------------CCccc
Confidence 99999887 7999999999999999999763210 12467
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 217 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 217 g~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
++||||++ |+|++.+..... ....++++|++++
T Consensus 184 ~tflID~~-G~I~~~~~~~~~-~~~~~~eil~~L~ 216 (254)
T 3tjj_A 184 GLFIIDDK-GILRQITLNDLP-VGRSVDETLRLVQ 216 (254)
T ss_dssp EEEEECTT-SBEEEEEEECTT-CCCCHHHHHHHHH
T ss_pred eEEEECCC-CeEEEEEecCCC-CCCCHHHHHHHHH
Confidence 89999999 699999987544 3447888887764
No 35
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.90 E-value=1.3e-23 Score=175.99 Aligned_cols=144 Identities=12% Similarity=0.092 Sum_probs=122.1
Q ss_pred cccCCCCCcEEecC--CC--CeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHH
Q 025441 70 DTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (252)
Q Consensus 70 ~~g~~apdf~L~d~--~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~ 145 (252)
++|+.+|+|++.|. +| +.++++++++++++||.|+++.||++|+.+++.|++++++|++.|++||+|+.|+.+.++
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~ 80 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHL 80 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHH
Confidence 46899999999998 99 999999986566666666669999999999999999999999999999999999999999
Q ss_pred HHHHHc-------CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceE
Q 025441 146 TFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 218 (252)
Q Consensus 146 ~f~~~~-------~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~ 218 (252)
+|.+++ +++|++++|++.+++++||+... . +...|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~-~-----------------------------------g~~~P~~ 124 (192)
T 2h01_A 81 AWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFN-E-----------------------------------SVALRAF 124 (192)
T ss_dssp HHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEET-T-----------------------------------TEECCEE
T ss_pred HHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCc-C-----------------------------------CceeeEE
Confidence 999988 89999999999999999987641 0 1235789
Q ss_pred EEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 219 IVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 219 fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
||||++ |+|++.+.+....+ .+.++++++++
T Consensus 125 ~liD~~-G~i~~~~~g~~~~~-~~~~~l~~~l~ 155 (192)
T 2h01_A 125 VLIDKQ-GVVQHLLVNNLALG-RSVDEILRLID 155 (192)
T ss_dssp EEECTT-SBEEEEEEGGGSSG-GGHHHHHHHHH
T ss_pred EEEcCC-CEEEEEEeCCCCCC-CCHHHHHHHHH
Confidence 999998 69999998754332 37788887764
No 36
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.90 E-value=3.2e-23 Score=181.52 Aligned_cols=146 Identities=10% Similarity=0.043 Sum_probs=121.2
Q ss_pred CccccCCCCCcEEec---CCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHH
Q 025441 68 SEDTKNLLDTVKVYD---VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 68 ~~~~g~~apdf~L~d---~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~ 144 (252)
...+|+.+|+|++.+ .+|+.++|+++ +++++||.|+++.|||+|+.|++.|++++++|++.|++||+|+.|+.+..
T Consensus 47 ~l~vG~~aPdF~l~~~~d~~G~~vsLsd~-~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~ 125 (240)
T 3qpm_A 47 KAKISKPAPQWEGTAVINGEFKELKLSDY-RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTH 125 (240)
T ss_dssp SCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHH
T ss_pred cCCCCCCCCCcEeeeeeCCCCcEEEHHHh-CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 368999999999874 45679999998 45566666655599999999999999999999999999999999999999
Q ss_pred HHHHHHc-------CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccce
Q 025441 145 RTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 145 ~~f~~~~-------~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 217 (252)
++|++++ +++||+++|++.++.++||+..... +...++
T Consensus 126 ~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~-----------------------------------g~~~p~ 170 (240)
T 3qpm_A 126 LAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQ-----------------------------------GHTLRG 170 (240)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTT-----------------------------------TEECEE
T ss_pred HHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccC-----------------------------------CCccce
Confidence 9999886 8999999999999999999864310 124678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+||||++ |+|+|.+.+.... ..+++++++.++
T Consensus 171 ~flID~~-G~I~~~~~~~~~~-~~~~~eil~~l~ 202 (240)
T 3qpm_A 171 LFIIDEK-GVLRQITMNDLPV-GRSVDETLRLVQ 202 (240)
T ss_dssp EEEECTT-SBEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred EEEEcCC-CeEEEEEecCCCC-CCCHHHHHHHHH
Confidence 9999999 6999999874433 446788887764
No 37
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.90 E-value=3.4e-23 Score=172.59 Aligned_cols=144 Identities=12% Similarity=0.193 Sum_probs=120.8
Q ss_pred cccCCCCCcEEecCCCC----eEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHH
Q 025441 70 DTKNLLDTVKVYDVNGN----AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (252)
Q Consensus 70 ~~g~~apdf~L~d~~G~----~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~ 145 (252)
++|+.+|+|++.|.+|+ .++++++ +++++||.|+|++||++|+.+++.|+++++++++.|+++|+|+.|+.+.++
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~ 80 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADL-KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHK 80 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTT-SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHH-CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHH
Confidence 57999999999999999 9999998 455665555559999999999999999999999999999999999999999
Q ss_pred HHHHHc----CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEE
Q 025441 146 TFSEQT----KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 146 ~f~~~~----~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 221 (252)
+|.+++ +++|++++|++.+++++||+..... +...|.+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~-----------------------------------g~~~P~~~li 125 (187)
T 1we0_A 81 AWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEET-----------------------------------GLADRGTFII 125 (187)
T ss_dssp HHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTT-----------------------------------TEECEEEEEE
T ss_pred HHHHHhccccCCCceEEECCchHHHHHhCCCcCCC-----------------------------------CceeeEEEEE
Confidence 999998 8999999999999999999764310 1236789999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 222 GPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 222 d~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|++ |+|++.|.+....+ .+.++++++++
T Consensus 126 d~~-G~i~~~~~g~~~~~-~~~~~l~~~l~ 153 (187)
T 1we0_A 126 DPD-GVIQAIEINADGIG-RDASTLINKVK 153 (187)
T ss_dssp CTT-SBEEEEEEECTTSC-CCTTHHHHHHH
T ss_pred CCC-CeEEEEEecCCCCC-CCHHHHHHHHH
Confidence 998 69999998754432 35667766654
No 38
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.90 E-value=6.2e-23 Score=173.62 Aligned_cols=146 Identities=12% Similarity=0.169 Sum_probs=122.9
Q ss_pred CccccCCCCCcEEecC--CC--CeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHH
Q 025441 68 SEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~--~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~ 143 (252)
...+|+.+|+|++.|. +| +.++++++ +++++||.|+++.|||+|+.+++.|++++++|++.|+++|+|+.|+.+.
T Consensus 5 ~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~-~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~ 83 (202)
T 1uul_A 5 EAEDLHPAPDFNETALMPNGTFKKVALTSY-KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYS 83 (202)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCcCCCcEeeeeecCCCccEEEHHHh-CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 3578999999999997 78 89999998 4455555555599999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccc
Q 025441 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 144 ~~~f~~~~-------~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 216 (252)
+++|++++ +++|++++|++.+++++||+.... .+...|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~-----------------------------------~g~~~P 128 (202)
T 1uul_A 84 HLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEE-----------------------------------DGVAYR 128 (202)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETT-----------------------------------TTEECE
T ss_pred HHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCC-----------------------------------CCceee
Confidence 99999988 899999999999999999976331 012467
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 217 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 217 g~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
++||||++ |+|++.+.+... ...+.++++++++
T Consensus 129 ~~~lid~~-G~i~~~~~g~~~-~~~~~~ell~~l~ 161 (202)
T 1uul_A 129 GLFIIDPK-QNLRQITVNDLP-VGRDVDEALRLVK 161 (202)
T ss_dssp EEEEECTT-SBEEEEEEECTT-BCCCHHHHHHHHH
T ss_pred EEEEECCC-CEEEEEEeCCCC-CCCCHHHHHHHHH
Confidence 89999998 699999987543 3357888888765
No 39
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.90 E-value=5.3e-23 Score=173.17 Aligned_cols=146 Identities=12% Similarity=0.105 Sum_probs=123.0
Q ss_pred CccccCCCCCcEEecC-CC--CeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHH
Q 025441 68 SEDTKNLLDTVKVYDV-NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~-~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~ 144 (252)
...+|+.+|+|++.|. +| +.++++++ +++++||.|++++||++|+.+++.|++++++|++.|+++|+|+.|+.+.+
T Consensus 4 ~l~~G~~aP~f~l~~~~~g~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 82 (197)
T 1qmv_A 4 NARIGKPAPDFKATAVVDGAFKEVKLSDY-KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTH 82 (197)
T ss_dssp TBCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCeEeEeecCCCccEEEHHHH-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 3578999999999998 88 99999998 45565555555999999999999999999999999999999999999999
Q ss_pred HHHHHHc-------CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccce
Q 025441 145 RTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 145 ~~f~~~~-------~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 217 (252)
++|++++ +++|++++|++.++.++||+.... .+...|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~-----------------------------------~~~~~P~ 127 (197)
T 1qmv_A 83 LAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTD-----------------------------------EGIAYRG 127 (197)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETT-----------------------------------TTEECEE
T ss_pred HHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCC-----------------------------------CCceeeE
Confidence 9999887 899999999999999999875321 0124678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+||||++ |+|++.+.+... ...++++++++++
T Consensus 128 ~~lid~~-G~i~~~~~g~~~-~~~~~~e~l~~l~ 159 (197)
T 1qmv_A 128 LFIIDGK-GVLRQITVNDLP-VGRSVDEALRLVQ 159 (197)
T ss_dssp EEEECTT-SBEEEEEEECTT-BCCCHHHHHHHHH
T ss_pred EEEECCC-CcEEEEEeCCCC-CCCCHHHHHHHHH
Confidence 9999998 699999987533 3467889888765
No 40
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.90 E-value=1.9e-23 Score=190.70 Aligned_cols=134 Identities=14% Similarity=0.139 Sum_probs=116.7
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcC
Q 025441 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK 152 (252)
Q Consensus 73 ~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~ 152 (252)
.++|+|+|.|.+|++++|+++ .++++||.||++.|||.|..|+++|++. ...|++||+||.|+.+.+++|+++++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~-~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~~~~~~~f~~~~~ 76 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDL-YGKYTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDSVEALKRFKEKND 76 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGT-TTSEEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCCHHHHHHHHHHHT
T ss_pred CCCCCcEEECCCcCEEeHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCCHHHHHHHHHhhC
Confidence 479999999999999999998 5678888898899999999999998753 23589999999999999999999999
Q ss_pred CcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCCeEEEEE
Q 025441 153 FKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYIH 232 (252)
Q Consensus 153 l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~I~~~h 232 (252)
++||+++|++.++.++||+.... ...+++||||++ |+|++.|
T Consensus 77 l~fp~l~D~~~~v~~~ygv~~~~-------------------------------------~~~r~tfiId~~-G~i~~~~ 118 (322)
T 4eo3_A 77 LKVTLLSDPEGILHEFFNVLENG-------------------------------------KTVRSTFLIDRW-GFVRKEW 118 (322)
T ss_dssp CCSEEEECTTCHHHHHTTCEETT-------------------------------------EECCEEEEECTT-SBEEEEE
T ss_pred CceEEEEcCchHHHHhcCCCCCC-------------------------------------cCccEEEEECCC-CEEEEEE
Confidence 99999999999999999975210 125689999999 6999999
Q ss_pred eCCCCCCCCCHHHHHHHhh
Q 025441 233 RDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 233 ~~~~~~D~~~~~eIL~al~ 251 (252)
+...+.+|++ |||++++
T Consensus 119 ~~v~~~~h~~--~~l~~~~ 135 (322)
T 4eo3_A 119 RRVKVEGHVQ--EVKEALD 135 (322)
T ss_dssp ESCCSTTHHH--HHHHHHH
T ss_pred eCCCccccHH--HHHHHHh
Confidence 9988888765 8888765
No 41
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.90 E-value=8.1e-23 Score=171.79 Aligned_cols=146 Identities=10% Similarity=0.108 Sum_probs=122.8
Q ss_pred CCccccCCCCCcEEecCC-------------C--CeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCC
Q 025441 67 VSEDTKNLLDTVKVYDVN-------------G--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGV 131 (252)
Q Consensus 67 ~~~~~g~~apdf~L~d~~-------------G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv 131 (252)
+.+.+|+.+|+|++.|.+ | +.++++++ +++++||.|+|++||++|+.+++.|+++++++.+.|+
T Consensus 2 ~~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v 80 (195)
T 2bmx_A 2 PLLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEH-PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDA 80 (195)
T ss_dssp CBCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSS-TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTE
T ss_pred CcCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHh-CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 346889999999999988 7 89999998 4556555555599999999999999999999999999
Q ss_pred EEEEEecCCHHHHHHHHHHc----CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccc
Q 025441 132 ALVLIGPGSVEQARTFSEQT----KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDT 207 (252)
Q Consensus 132 ~vVaVs~d~~~~~~~f~~~~----~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~ 207 (252)
++|+|+.|+.+.+++|.+++ +++|++++|++..++++||+... .
T Consensus 81 ~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~-~------------------------------- 128 (195)
T 2bmx_A 81 QILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNA-D------------------------------- 128 (195)
T ss_dssp EEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCT-T-------------------------------
T ss_pred EEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCccc-C-------------------------------
Confidence 99999999999999999998 89999999999999999987632 1
Q ss_pred cCCCccccceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 208 VSRGGWQQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 208 ~~g~~~q~gg~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+...|.+||||++ |+|++.+.+.... ..+.++++++++
T Consensus 129 ----g~~~P~~~lid~~-G~i~~~~~g~~~~-~~~~~~l~~~l~ 166 (195)
T 2bmx_A 129 ----GVADRVTFIVDPN-NEIQFVSATAGSV-GRNVDEVLRVLD 166 (195)
T ss_dssp ----SSBCEEEEEECTT-SBEEEEEEECTTC-CCCHHHHHHHHH
T ss_pred ----CCccceEEEEcCC-CeEEEEEecCCCC-CCCHHHHHHHHH
Confidence 0135789999998 6999999875433 347888888765
No 42
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.90 E-value=4.6e-23 Score=182.19 Aligned_cols=146 Identities=14% Similarity=0.099 Sum_probs=123.6
Q ss_pred ccccCCCCCcEEecCCCCeEeC-CCcc-CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPI-SDLW-KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~l-s~l~-~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~ 146 (252)
..+|+.+|+|++.+.+| .+++ +++. +++++||+|||+.|||+|..|++.|++++++|++.|++||+||.|+.+...+
T Consensus 5 ~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~ 83 (249)
T 3a2v_A 5 PLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIK 83 (249)
T ss_dssp CCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHH
Confidence 57899999999999999 8999 9975 5677889999999999999999999999999999999999999999988888
Q ss_pred HHHH------cCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEE
Q 025441 147 FSEQ------TKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 220 (252)
Q Consensus 147 f~~~------~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fV 220 (252)
|.+. .+++||+++|+++++.++||+..... | ....+++||
T Consensus 84 w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~----------------------------g------~~~~p~~fI 129 (249)
T 3a2v_A 84 WKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAES----------------------------A------THTVRGVFI 129 (249)
T ss_dssp HHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTC----------------------------S------SSCCEEEEE
T ss_pred HHHHHHHhcCCCCceeEEECCchHHHHHhCCccccC----------------------------C------CcccceEEE
Confidence 8774 58999999999999999999864310 0 124679999
Q ss_pred EeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 221 AGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 221 id~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
||++ |+|++.+.+..... .+.+||+++++
T Consensus 130 ID~d-G~I~~~~~~~~~~g-r~~~Ellr~I~ 158 (249)
T 3a2v_A 130 VDAR-GVIRTMLYYPMELG-RLVDEILRIVK 158 (249)
T ss_dssp ECTT-SBEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred ECCC-CeEEEEEecCCccc-chhHHHHHHHH
Confidence 9999 69999998754322 36888888764
No 43
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.90 E-value=9.5e-23 Score=175.66 Aligned_cols=146 Identities=11% Similarity=0.090 Sum_probs=122.5
Q ss_pred CccccCCCCCcEEec---CCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHH
Q 025441 68 SEDTKNLLDTVKVYD---VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 68 ~~~~g~~apdf~L~d---~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~ 144 (252)
...+|+.+|+|++.+ .+|+.++++++ .++++||.|+++.|||+|+.+++.|++++++|++.|++||+|+.|+.+.+
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 104 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISLDDF-KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSH 104 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEGGGG-TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 468999999999974 57899999998 44666666655999999999999999999999999999999999999999
Q ss_pred HHHHHHc-------CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccce
Q 025441 145 RTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 145 ~~f~~~~-------~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 217 (252)
++|++++ +++|++++|++.++.++||+..... +...|+
T Consensus 105 ~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~-----------------------------------g~~~P~ 149 (220)
T 1zye_A 105 LAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGP-----------------------------------GLALRG 149 (220)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTT-----------------------------------TEECEE
T ss_pred HHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCC-----------------------------------Ccccce
Confidence 9999887 8899999999999999999764310 124678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+||||++ |+|+|.+.+. .....+.++++++++
T Consensus 150 ~~liD~~-G~I~~~~~g~-~~~~~~~~ell~~l~ 181 (220)
T 1zye_A 150 LFIIDPN-GVIKHLSVND-LPVGRSVEETLRLVK 181 (220)
T ss_dssp EEEECTT-SBEEEEEEEC-TTCCCCHHHHHHHHH
T ss_pred EEEECCC-CEEEEEEecC-CCCCCCHHHHHHHHH
Confidence 9999998 6999999874 344467888888764
No 44
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.89 E-value=1e-22 Score=175.62 Aligned_cols=145 Identities=12% Similarity=0.116 Sum_probs=121.1
Q ss_pred CccccCCCCCcEEecC---CCCeEeCCCccCCCeEEEEEEc-CCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHH
Q 025441 68 SEDTKNLLDTVKVYDV---NGNAIPISDLWKDRKAVVAFAR-HFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~---~G~~v~ls~l~~~~~vVLvF~R-~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~ 143 (252)
..++|+.+|+|+|.+. +|+.++++++ +++ .+|++|| ++||++|+.+++.|++++++|++.|++||+|+.|+.+.
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~-~Gk-~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~ 116 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDY-RGK-YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYS 116 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGG-TTS-EEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHh-CCC-eEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 4689999999999954 5699999998 444 5555666 59999999999999999999999999999999999989
Q ss_pred HHHHHHHc-------CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccc
Q 025441 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 144 ~~~f~~~~-------~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 216 (252)
.++|.+++ +++|++++|++..+.++||+.... .+...|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~-----------------------------------~g~~~P 161 (222)
T 3ztl_A 117 HLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEE-----------------------------------DGNAFR 161 (222)
T ss_dssp HHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTT-----------------------------------TSSBCE
T ss_pred HHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecC-----------------------------------CCCccc
Confidence 99999887 899999999999999999976331 012367
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 217 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 217 g~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
.+||||++ |+|+|.+.+.... ...+++++++++
T Consensus 162 ~~~lID~~-G~I~~~~~g~~~~-~~~~~~il~~l~ 194 (222)
T 3ztl_A 162 GLFIIDPN-GILRQITINDKPV-GRSVDETLRLLD 194 (222)
T ss_dssp EEEEECTT-SEEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred eEEEECCC-CeEEEEEecCCCC-CCCHHHHHHHHH
Confidence 89999998 6999999986554 335889988775
No 45
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.89 E-value=1.4e-22 Score=170.48 Aligned_cols=144 Identities=10% Similarity=0.054 Sum_probs=122.1
Q ss_pred cccCCCCCcEEecC--CCC---eEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHH
Q 025441 70 DTKNLLDTVKVYDV--NGN---AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 70 ~~g~~apdf~L~d~--~G~---~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~ 144 (252)
++|+.+|+|++.|. +|+ .++++++++++++||.|++++||++|+.+++.|+++++++.+.|+++|+|+.|+.+.+
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 81 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVH 81 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHH
Confidence 57999999999998 898 9999998556666666655999999999999999999999999999999999999999
Q ss_pred HHHHHH-------cCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccce
Q 025441 145 RTFSEQ-------TKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 145 ~~f~~~-------~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 217 (252)
++|.++ ++++|++++|++.+++++||+.... +...|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~------------------------------------g~~~P~ 125 (198)
T 1zof_A 82 FAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEE------------------------------------AIALRG 125 (198)
T ss_dssp HHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETT------------------------------------TEECEE
T ss_pred HHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccC------------------------------------Ccccce
Confidence 999998 8999999999999999999876420 023578
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+||||++ |+|++.+.+. .....+.++|+++++
T Consensus 126 ~~lid~~-G~i~~~~~g~-~~~~~~~~~l~~~l~ 157 (198)
T 1zof_A 126 AFLIDKN-MKVRHAVIND-LPLGRNADEMLRMVD 157 (198)
T ss_dssp EEEEETT-TEEEEEEEES-SSCCCHHHHHHHHHH
T ss_pred EEEECCC-CEEEEEEecC-CCCCCCHHHHHHHHH
Confidence 9999998 6999999873 233456778877664
No 46
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.88 E-value=2.6e-22 Score=172.25 Aligned_cols=124 Identities=15% Similarity=0.132 Sum_probs=110.5
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec--------C
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~--------d 139 (252)
..++|+.+|+|+|.|.+|+.++++++ .+++++|++||++|||+|+.+++.|+++++++++.|+++|+|+. +
T Consensus 31 ~l~~G~~aP~f~l~~~~G~~v~l~~~-~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d 109 (218)
T 3u5r_E 31 SITLGTRAADFVLPDAGGNLFTLAEF-KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEE 109 (218)
T ss_dssp CCCTTCBCCCCCEECTTCCEECGGGG-TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGG
T ss_pred cCCCCCcCCCcEeECCCCCEEeHHHh-CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccC
Confidence 46889999999999999999999998 44557888899999999999999999999999999999999999 6
Q ss_pred CHHHHHHHHHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEE
Q 025441 140 SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGII 219 (252)
Q Consensus 140 ~~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~f 219 (252)
+.+.+++|+++++++|+++.|++..+.++||+.. .|.+|
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~-----------------------------------------~P~~~ 148 (218)
T 3u5r_E 110 TLERVGAEVKAYGYGFPYLKDASQSVAKAYGAAC-----------------------------------------TPDFF 148 (218)
T ss_dssp SHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCE-----------------------------------------ESEEE
T ss_pred CHHHHHHHHHHhCCCccEEECCccHHHHHcCCCC-----------------------------------------CCeEE
Confidence 7789999999999999999999998888887531 34689
Q ss_pred EEeCCCCeEEEEEeC
Q 025441 220 VAGPGKSNISYIHRD 234 (252)
Q Consensus 220 Vid~ggg~I~~~h~~ 234 (252)
|||++ |+|+|....
T Consensus 149 liD~~-G~i~~~g~~ 162 (218)
T 3u5r_E 149 LYDRE-RRLVYHGQF 162 (218)
T ss_dssp EECTT-CBEEEEECS
T ss_pred EECCC-CcEEEeccc
Confidence 99998 699987654
No 47
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.88 E-value=1.1e-21 Score=156.29 Aligned_cols=137 Identities=14% Similarity=0.122 Sum_probs=117.1
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC-CHHHHHHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTF 147 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d-~~~~~~~f 147 (252)
.++|+.+|+|++.| +|+.++++++ +++.+|++|++.||++|+.+++.|.++++++.+.|+.+|+|+.+ +.+.+++|
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~--~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~ 79 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDK--TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKF 79 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGG--TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHh--CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHH
Confidence 57899999999999 9999999998 44566777779999999999999999999999999999999988 55789999
Q ss_pred HHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCCe
Q 025441 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 227 (252)
.++++++|+++.|++..+.+.||+. ..|..||||++ |+
T Consensus 80 ~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~-G~ 117 (152)
T 3gl3_A 80 LAQVPAEFTVAFDPKGQTPRLYGVK-----------------------------------------GMPTSFLIDRN-GK 117 (152)
T ss_dssp HHHSCCCSEEEECTTCHHHHHTTCC-----------------------------------------SSSEEEEECTT-SB
T ss_pred HHHcCCCCceeECCcchhHHHcCCC-----------------------------------------CCCeEEEECCC-CC
Confidence 9999999999999998888877653 13568999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHh
Q 025441 228 ISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 228 I~~~h~~~~~~D~~~~~eIL~al 250 (252)
|++.+.+....+..++++.|+.+
T Consensus 118 i~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 118 VLLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp EEEEEESCCTTTHHHHHHHHHHH
T ss_pred EEEEEccCCCcCHHHHHHHHHHH
Confidence 99999986666556666666554
No 48
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.88 E-value=1.1e-21 Score=156.69 Aligned_cols=138 Identities=15% Similarity=0.140 Sum_probs=118.9
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC--HHHHHHH
Q 025441 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS--VEQARTF 147 (252)
Q Consensus 70 ~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~--~~~~~~f 147 (252)
++|+.+|+|++.|.+|+.++++++ +++.+|++|++.||++|+.+++.|.++++++.+.++.+++|+.+. .+.+++|
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~--~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 80 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGEVVKLSDL--KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEF 80 (154)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHH
T ss_pred CCCCCCCCeEEEcCCCCEEehhhc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHH
Confidence 679999999999999999999998 445666666799999999999999999999999999999999987 6789999
Q ss_pred HHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCCe
Q 025441 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 227 (252)
.++++++|+++.|++..+.+.||+. ..|.+||||++ |+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~-G~ 118 (154)
T 3kcm_A 81 FRKTGFTLPVLLDADKRVGKLYGTT-----------------------------------------GVPETFVIDRH-GV 118 (154)
T ss_dssp HHHHCCCCCEEECTTCHHHHHHTCC-----------------------------------------SBCEEEEECTT-SB
T ss_pred HHHcCCCeeEEecCchHHHHHhCCC-----------------------------------------CCCeEEEECCC-Cc
Confidence 9999999999999998888877643 13569999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 228 ISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 228 I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|++.+.+....+.+++.+.|+.+.
T Consensus 119 i~~~~~g~~~~~~~~l~~~l~~l~ 142 (154)
T 3kcm_A 119 ILKKVVGAMEWDHPEVIAFLNNEL 142 (154)
T ss_dssp EEEEEESCCCTTSHHHHHHHHTC-
T ss_pred EEEEEcCCCccccHHHHHHHHHHH
Confidence 999999877677777777776553
No 49
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.88 E-value=2.4e-21 Score=152.97 Aligned_cols=130 Identities=13% Similarity=0.109 Sum_probs=109.2
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHH---hHHHHHhCCCEEEEEecC-CHHHHH
Q 025441 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPG-SVEQAR 145 (252)
Q Consensus 70 ~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~---~~~~~~~~Gv~vVaVs~d-~~~~~~ 145 (252)
++|+.+|+|++.|.+|+.++++++ +++.+|++||++||++|+.+++.|.+ +++++++.|+.+|+|+.+ +.+..+
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~ 79 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRL--KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWA 79 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGC--CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHH
T ss_pred CCCCcCCCCEEECCCCCEEEhhhc--CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHH
Confidence 579999999999999999999998 45678888899999999999999998 899999999999999998 567889
Q ss_pred HHHHHcCCcceeeecCChHHHH--HcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeC
Q 025441 146 TFSEQTKFKGEVYADPNHSSYE--ALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 146 ~f~~~~~l~fpllsDp~~~ly~--alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ 223 (252)
+|.++++++|+++.|++..+.. .||+. ..|..||+|+
T Consensus 80 ~~~~~~~~~~~~~~d~~~~~~~~~~~~v~-----------------------------------------~~P~~~lid~ 118 (142)
T 3ewl_A 80 TKAVYMPQGWIVGWNKAGDIRTRQLYDIR-----------------------------------------ATPTIYLLDG 118 (142)
T ss_dssp HHHTTSCTTCEEEECTTCHHHHTTCSCCC-----------------------------------------SSSEEEEECT
T ss_pred HHHHHcCCCcceeeCCccchhhHHHcCCC-----------------------------------------CCCeEEEECC
Confidence 9999999999999998877654 33321 2467999999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 224 GKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 224 ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+ |+|++. ..+.+++.+.++
T Consensus 119 ~-G~i~~~--------~~~~~~l~~~l~ 137 (142)
T 3ewl_A 119 R-KRVILK--------DTSMEQLIDYLA 137 (142)
T ss_dssp T-CBEEEC--------SCCHHHHHHHHH
T ss_pred C-CCEEec--------CCCHHHHHHHHH
Confidence 8 699872 255667766654
No 50
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.87 E-value=1.7e-21 Score=158.83 Aligned_cols=153 Identities=12% Similarity=0.172 Sum_probs=119.4
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCH-hhHHHHHHHHHhHHHHHhCC--CEEEEEecC----C
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDASG--VALVLIGPG----S 140 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp-~C~~el~~L~~~~~~~~~~G--v~vVaVs~d----~ 140 (252)
...+|+.+|+|+|.|.+|+.++++++ +++++|++||++||+ .|+.+++.|.++++++.+.| ++||+|+.| +
T Consensus 6 ~l~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~ 83 (174)
T 1xzo_A 6 KDPLNYEVEPFTFQNQDGKNVSLESL--KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDK 83 (174)
T ss_dssp CSCCCEECCCCEEECTTSCEEETGGG--TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred cCccccccCCcEEEcCCCCEEehhhc--CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCC
Confidence 46889999999999999999999998 445677778899999 99999999999999999887 999999986 6
Q ss_pred HHHHHHHHHHcCCcc---eeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccce
Q 025441 141 VEQARTFSEQTKFKG---EVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 141 ~~~~~~f~~~~~l~f---pllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 217 (252)
.+.+++|+++++++| ++++|++.++.++|++..... .+ . ......+....+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~-~~----------------~--------~~~~~~~~~~~p~ 138 (174)
T 1xzo_A 84 PKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKA-IV----------------K--------KPEGEDQVIHQSS 138 (174)
T ss_dssp HHHHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCC-CC----------------C--------CCSSCCSCCSCCE
T ss_pred HHHHHHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCe-eE----------------e--------ecCCCCeeeeeeE
Confidence 789999999999999 999999999888776421000 00 0 0000001134678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+||||++ |+|++.|.+... .+.++|++.++
T Consensus 139 ~~lid~~-G~i~~~~~g~~~---~~~~~l~~~l~ 168 (174)
T 1xzo_A 139 FYLVGPD-GKVLKDYNGVEN---TPYDDIISDVK 168 (174)
T ss_dssp EEEECTT-SEEEEEEESSSS---CCHHHHHHHHH
T ss_pred EEEECCC-CeEEEEEcCCCC---CCHHHHHHHHH
Confidence 9999999 699999987542 35667766654
No 51
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.87 E-value=4e-21 Score=160.01 Aligned_cols=140 Identities=15% Similarity=0.123 Sum_probs=116.2
Q ss_pred CccccCCCCCcEEe-cCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec--------
Q 025441 68 SEDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-------- 138 (252)
Q Consensus 68 ~~~~g~~apdf~L~-d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~-------- 138 (252)
...+|+.+|+|++. |.+|+.++++++ ++++.+|++||++||++|+.+++.|+++++++.+.|+.+|+|+.
T Consensus 17 ~~~~g~~~p~f~l~~~~~G~~~~l~~~-~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~ 95 (196)
T 2ywi_A 17 MFPLGKQAPPFALTNVIDGNVVRLEDV-KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPE 95 (196)
T ss_dssp CCCTTCBCCCCEEEETTTCCEEEHHHH-CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGG
T ss_pred CCCcCCcCCceeeeecCCCCEEeHHHh-CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccc
Confidence 36889999999999 999999999998 44445777889999999999999999999999999999999998
Q ss_pred CCHHHHHHHHHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceE
Q 025441 139 GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 218 (252)
Q Consensus 139 d~~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~ 218 (252)
++.+.+++|.++++++|+++.|++..+.+.||+. ..|..
T Consensus 96 d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~ 134 (196)
T 2ywi_A 96 DSPENMKKVAEELGYPFPYLYDETQEVAKAYDAA-----------------------------------------CTPDF 134 (196)
T ss_dssp GSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCC-----------------------------------------EESEE
T ss_pred cCHHHHHHHHHHcCCCceEEECCchHHHHHhCCC-----------------------------------------CCCeE
Confidence 5678999999999999999999998888877643 13468
Q ss_pred EEEeCCCCeEEEEEeCCCC----CCCCCHHHHHHHh
Q 025441 219 IVAGPGKSNISYIHRDKEA----GDDPDIQDILKAC 250 (252)
Q Consensus 219 fVid~ggg~I~~~h~~~~~----~D~~~~~eIL~al 250 (252)
||||++ |+|+|.+...+. ....+.+++.+++
T Consensus 135 ~lid~~-G~i~~~~~~~~~~~~~~g~~~~~~l~~~i 169 (196)
T 2ywi_A 135 YIFDRD-LKCVYRGQLDDSRPNNGIPVTGESIRAAL 169 (196)
T ss_dssp EEEETT-CBEEEEECSSSCCTTTCCCCCCHHHHHHH
T ss_pred EEEcCC-CeEEEccccCcccccccCccCHHHHHHHH
Confidence 999998 699999875432 2233555665544
No 52
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.86 E-value=3.2e-21 Score=159.53 Aligned_cols=143 Identities=15% Similarity=0.219 Sum_probs=117.4
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH--HHHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV--EQAR 145 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~--~~~~ 145 (252)
....|+.+|+|++.|.+|+.++++++ +++++|++||++||++|+.+++.|+++++++.+.++.+|+|+.+.. +.++
T Consensus 33 ~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~ 110 (186)
T 1jfu_A 33 MASAPLKLPDLAFEDADGKPKKLSDF--RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPK 110 (186)
T ss_dssp ECCSCCBCCCCEEECTTSCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHH
T ss_pred cccCCCcCCCcEeEcCCCCEeeHHHc--CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHH
Confidence 35789999999999999999999998 4556777778999999999999999999999888999999999864 6889
Q ss_pred HHHHHcCC-cceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCC
Q 025441 146 TFSEQTKF-KGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 224 (252)
Q Consensus 146 ~f~~~~~l-~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~g 224 (252)
+|.+++++ .|+++.|++..++++||+.... ...|.+||||++
T Consensus 111 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-------------------------------------~~~P~~~lid~~ 153 (186)
T 1jfu_A 111 TFLKEANLTRLGYFNDQKAKVFQDLKAIGRA-------------------------------------LGMPTSVLVDPQ 153 (186)
T ss_dssp HHHHHTTCCTTCCEECTTCHHHHHHHTTTCC-------------------------------------SSSSEEEEECTT
T ss_pred HHHHHcCCCCCceEECCcchHHHHhcccccc-------------------------------------CCCCEEEEECCC
Confidence 99999999 4999999999998888764210 125689999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025441 225 KSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 225 gg~I~~~h~~~~~~D~~~~~eIL~al 250 (252)
|+|++.|.+....+..++.+.|+.+
T Consensus 154 -G~i~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 154 -GCEIATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp -SBEEEEEESCCCTTSHHHHHHHHHH
T ss_pred -CCEEEEEecCCccCHHHHHHHHHHH
Confidence 6999999875443444555555543
No 53
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.86 E-value=9.9e-21 Score=156.43 Aligned_cols=138 Identities=19% Similarity=0.226 Sum_probs=114.2
Q ss_pred CccccCCCCCcEEecC--CCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCC------EEEEEecC
Q 025441 68 SEDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGV------ALVLIGPG 139 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~--~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv------~vVaVs~d 139 (252)
.+..|+.+|+|++.|. +|+.++++++ +++++|++||+.||++|+.+++.|+++++++.+.|+ .+|+|+.+
T Consensus 30 ~~~~g~~~p~f~l~~~~~~g~~~~l~~~--~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d 107 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLMEEGTQINLSDF--ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVR 107 (183)
T ss_dssp CGGGCCCCCCCEEEBSSSTTCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECS
T ss_pred ccccCCCCCceeccccccCCcEecHHHh--CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECC
Confidence 3578999999999999 9999999998 456677777899999999999999999999999999 99999998
Q ss_pred C--HHHHHHHHHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccce
Q 025441 140 S--VEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 140 ~--~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 217 (252)
+ .+.+++|.++++++|+++.|++..+.+.||.... ...|.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v--------------------------------------~~~P~ 149 (183)
T 3lwa_A 108 DYSRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVPA--------------------------------------SVIPT 149 (183)
T ss_dssp CCCHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCCT--------------------------------------TCCSE
T ss_pred CCCHHHHHHHHHHcCCCccEEECCcchHHHHhccCCC--------------------------------------CCCCe
Confidence 7 7899999999999999999998887776652100 12567
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+||||++ |+|++.|.+. .+.+++.+.++
T Consensus 150 ~~lid~~-G~i~~~~~g~-----~~~~~l~~~l~ 177 (183)
T 3lwa_A 150 TIVLDKQ-HRPAAVFLRE-----VTSKDVLDVAL 177 (183)
T ss_dssp EEEECTT-SCEEEEECSC-----CCHHHHHHHHH
T ss_pred EEEECCC-CcEEEEEcCC-----CCHHHHHHHHH
Confidence 9999998 6999988753 35666665543
No 54
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.86 E-value=2.9e-21 Score=156.07 Aligned_cols=141 Identities=11% Similarity=0.081 Sum_probs=119.2
Q ss_pred CCCCCCccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 63 SPPSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 63 ~~~~~~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
........+|+.+|+|++.|.+|+.++++++ +++.+|++|++.||++|+.+++.|.++++++.+.++.+|+|+.+.
T Consensus 9 ~~~~~~~~~G~~~p~f~l~~~~g~~~~l~~~--~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~-- 84 (158)
T 3hdc_A 9 ESDAPLVRTGALAPNFKLPTLSGENKSLAQY--RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK-- 84 (158)
T ss_dssp CCCSCCCCTTSBCCCCEEECTTSCEEESGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS--
T ss_pred ccCCcccCCCCcCCCceeEcCCCCEEehHHh--CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH--
Confidence 3345567899999999999999999999998 345666666799999999999999999999998899999999987
Q ss_pred HHHHHHHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEe
Q 025441 143 QARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 222 (252)
Q Consensus 143 ~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid 222 (252)
.+++|.++++++|+++.|++..+.+.||+. ..|..||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid 123 (158)
T 3hdc_A 85 RFPEKYRRAPVSFNFLSDATGQVQQRYGAN-----------------------------------------RLPDTFIVD 123 (158)
T ss_dssp SCCGGGGGCCCSCEEEECTTSHHHHHTTCC-----------------------------------------SSSEEEEEC
T ss_pred HHHHHHHHcCCCceEEECchHHHHHHhCCC-----------------------------------------CcceEEEEc
Confidence 578899999999999999998888887753 134689999
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHH
Q 025441 223 PGKSNISYIHRDKEAGDDPDIQDILKA 249 (252)
Q Consensus 223 ~ggg~I~~~h~~~~~~D~~~~~eIL~a 249 (252)
++ |+|++.+.+....|.++..+-++.
T Consensus 124 ~~-G~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 124 RK-GIIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp TT-SBEEEEEESCCCTTSHHHHHHHHT
T ss_pred CC-CCEEEEEeCCCccchHHHHHHHHh
Confidence 98 699999999877777665555543
No 55
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.86 E-value=1.1e-20 Score=149.77 Aligned_cols=131 Identities=9% Similarity=0.046 Sum_probs=108.7
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHH---hHHHHHhCCCEEEEEecCCH-HHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPGSV-EQA 144 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~---~~~~~~~~Gv~vVaVs~d~~-~~~ 144 (252)
..+|+.+|+|++.|.+|+.++++++ +++.+|++||++||++|+.+++.|.+ +++++++.|+.+|+|+.++. +..
T Consensus 5 ~~~G~~ap~f~l~~~~g~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~ 82 (142)
T 3eur_A 5 NRLGTKALNFTYTLDSGVKGTLYQF--PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEW 82 (142)
T ss_dssp TCTTSBCCCCEEEETTSCEEETTTC--CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHH
T ss_pred hcCCCccCCcEEEcCCCCEeeHHHc--CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHH
Confidence 5789999999999999999999998 34677888899999999999999999 99999999999999999876 688
Q ss_pred HHHHHHcCCcceeeecCChH--HHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEe
Q 025441 145 RTFSEQTKFKGEVYADPNHS--SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 222 (252)
Q Consensus 145 ~~f~~~~~l~fpllsDp~~~--ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid 222 (252)
++|.++++++|+.+.|++.. +.+.|++ ...|.+||+|
T Consensus 83 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~v-----------------------------------------~~~P~~~lid 121 (142)
T 3eur_A 83 KKHRNDFAKEWTNGYDKELVIKNKNLYDL-----------------------------------------RAIPTLYLLD 121 (142)
T ss_dssp HHHGGGSCTTSEEEECTTCHHHHTTCSCC-----------------------------------------TTCSEEEEEC
T ss_pred HHHHHhcccccccccCccchhhhhhhcCC-----------------------------------------CcCCeEEEEC
Confidence 99999999999999997765 1221111 1357899999
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 223 PGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 223 ~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
++ |+|++.+.+ .++|.+.++
T Consensus 122 ~~-G~i~~~~~~--------~~~l~~~l~ 141 (142)
T 3eur_A 122 KN-KTVLLKDAT--------LQKVEQYLA 141 (142)
T ss_dssp TT-CBEEEEEEC--------HHHHHHHHH
T ss_pred CC-CcEEecCCC--------HHHHHHHHh
Confidence 98 699998763 466666654
No 56
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.86 E-value=4e-21 Score=152.55 Aligned_cols=122 Identities=9% Similarity=-0.032 Sum_probs=98.4
Q ss_pred CCccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC-CHHHHH
Q 025441 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQAR 145 (252)
Q Consensus 67 ~~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d-~~~~~~ 145 (252)
...++|+.+|+|++ |.+|+.++++++ +++++|++||++||++|+.+++.|+++++++.+.|+.+|+|+.| +.+..+
T Consensus 5 ~~l~~G~~~P~f~l-~~~g~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~ 81 (143)
T 4fo5_A 5 EGVNPGDLAPRIEF-LGNDAKASFHNQ--LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFT 81 (143)
T ss_dssp BSSSTTSBCCCCCC------CCCSCCS--SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHH
T ss_pred cccCCcccCCceEE-cCCCCEEEHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHH
Confidence 45789999999999 999999999998 45678888899999999999999999999999889999999998 457899
Q ss_pred HHHHHcCCcc-eeeecCC---hHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEE
Q 025441 146 TFSEQTKFKG-EVYADPN---HSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 146 ~f~~~~~l~f-pllsDp~---~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 221 (252)
+|.++++++| ++++|.+ ..+++.||+. ..|.+|||
T Consensus 82 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~li 120 (143)
T 4fo5_A 82 ETVKIDKLDLSTQFHEGLGKESELYKKYDLR-----------------------------------------KGFKNFLI 120 (143)
T ss_dssp HHHHHHTCCGGGEEECTTGGGSHHHHHTTGG-----------------------------------------GCCCEEEE
T ss_pred HHHHHhCCCCceeeecccccchHHHHHcCCC-----------------------------------------CCCcEEEE
Confidence 9999999999 7889874 3444444421 24579999
Q ss_pred eCCCCeEEEEEe
Q 025441 222 GPGKSNISYIHR 233 (252)
Q Consensus 222 d~ggg~I~~~h~ 233 (252)
|++ |+|++.+.
T Consensus 121 d~~-G~i~~~~~ 131 (143)
T 4fo5_A 121 NDE-GVIIAANV 131 (143)
T ss_dssp CTT-SBEEEESC
T ss_pred CCC-CEEEEccC
Confidence 998 69998764
No 57
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.86 E-value=8.1e-21 Score=151.94 Aligned_cols=122 Identities=11% Similarity=0.007 Sum_probs=106.5
Q ss_pred CccccCCCCCcEEecCCCCeEeCC--CccCCCeEEEEEEcCCCCHh--hHHHHHHHHHhHHHH-HhCCCEEEEEecCCH-
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPIS--DLWKDRKAVVAFARHFGCVL--CRKRADYLAAKKDVM-DASGVALVLIGPGSV- 141 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls--~l~~~~~vVLvF~R~~~Cp~--C~~el~~L~~~~~~~-~~~Gv~vVaVs~d~~- 141 (252)
..++|+.+|+|++.|.+|+.++++ ++ +++++|++||++||++ |+.+++.|.++++++ ++.|+.+|+|+.|+.
T Consensus 4 ~l~~G~~~p~f~l~~~~g~~~~l~~~~~--~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~ 81 (150)
T 3fw2_A 4 KSEIGKYAPFFSLPNAKGEKITRSSDAF--KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDK 81 (150)
T ss_dssp TTSTTSBCCCCCEEBTTCCEECTTSTTT--TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCH
T ss_pred cccCCCcCCccEeECCCCCEEecchhhh--CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCH
Confidence 468899999999999999999999 88 4567888889999999 999999999999999 888999999999865
Q ss_pred HHHHHHHHHcCCcceeeecC---ChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceE
Q 025441 142 EQARTFSEQTKFKGEVYADP---NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 218 (252)
Q Consensus 142 ~~~~~f~~~~~l~fpllsDp---~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~ 218 (252)
+.+++|.++++++|+++.|+ +..+.+.||+. ..|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~ 120 (150)
T 3fw2_A 82 QQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIY-----------------------------------------KIPAN 120 (150)
T ss_dssp HHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC-----------------------------------------SSSEE
T ss_pred HHHHHHHHHhCCCceEEEcCcccchHHHHHcCCC-----------------------------------------ccCeE
Confidence 78999999999999999998 55666666543 14579
Q ss_pred EEEeCCCCeEEEEEe
Q 025441 219 IVAGPGKSNISYIHR 233 (252)
Q Consensus 219 fVid~ggg~I~~~h~ 233 (252)
||||++ |+|++.+.
T Consensus 121 ~lid~~-G~i~~~~~ 134 (150)
T 3fw2_A 121 ILLSSD-GKILAKNL 134 (150)
T ss_dssp EEECTT-SBEEEESC
T ss_pred EEECCC-CEEEEccC
Confidence 999998 69999874
No 58
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.86 E-value=5.7e-21 Score=158.55 Aligned_cols=150 Identities=8% Similarity=-0.003 Sum_probs=111.7
Q ss_pred CCCCccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC-----
Q 025441 65 PSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----- 139 (252)
Q Consensus 65 ~~~~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d----- 139 (252)
.....++|+.+|+|++.|.+|+.++++++ +++++|++||++|||+|+.+++.|+++++++.+.|+++|+|+.+
T Consensus 17 ~~~~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 94 (183)
T 2obi_A 17 SRDDWRCARSMHEFSAKDIDGHMVNLDKY--RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQ 94 (183)
T ss_dssp --CCGGGCCSGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTC
T ss_pred cccCCcccCcccceEEEcCCCCEeeHHHc--CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCC
Confidence 44457899999999999999999999998 45678888899999999999999999999999999999999975
Q ss_pred ---CHHHHHHHHHHcCCcceeee--cCChH----HHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCC
Q 025441 140 ---SVEQARTFSEQTKFKGEVYA--DPNHS----SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSR 210 (252)
Q Consensus 140 ---~~~~~~~f~~~~~l~fplls--Dp~~~----ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g 210 (252)
+.+.+++|+++++++||++. |.+.. +|+.++..... .+..+.
T Consensus 95 e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~-------------------------~g~~~~---- 145 (183)
T 2obi_A 95 EPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKG-------------------------KGILGN---- 145 (183)
T ss_dssp CCSCHHHHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTT-------------------------CCSSSS----
T ss_pred CCCCHHHHHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccCCC-------------------------CCcccc----
Confidence 56889999999999999997 65543 23322111000 000000
Q ss_pred CccccceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 211 GGWQQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 211 ~~~q~gg~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
.....|.+||||++ |+|++.+.+. .+.+++.+.++
T Consensus 146 ~i~~~P~~~lid~~-G~i~~~~~g~-----~~~~~l~~~i~ 180 (183)
T 2obi_A 146 AIKWNFTKFLIDKN-GCVVKRYGPM-----EEPLVIEKDLP 180 (183)
T ss_dssp SCCSTTCEEEECTT-SCEEEEECTT-----SCTHHHHTTSG
T ss_pred cccccceEEEECCC-CCEEEEeCCC-----CCHHHHHHHHH
Confidence 01135789999998 6999998752 23456655543
No 59
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.85 E-value=1.3e-20 Score=151.02 Aligned_cols=133 Identities=19% Similarity=0.245 Sum_probs=109.8
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC-HHHHHHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTF 147 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~-~~~~~~f 147 (252)
.++|+.+|+|++.|.+|+.++++++ +++++|++|++.||++|+.+++.|+++++++.+.|+.+++|+.+. .+..++|
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDF--KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKA 80 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGG--TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHc--CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 5789999999999999999999998 445677777899999999999999999999999999999999985 5788999
Q ss_pred HHHcCCcceeeecC---ChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCC
Q 025441 148 SEQTKFKGEVYADP---NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 224 (252)
Q Consensus 148 ~~~~~l~fpllsDp---~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~g 224 (252)
.++++++|+++.|+ +..+.+.||+. ..|..||+|++
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~ 119 (152)
T 2lrn_A 81 IEEDKSYWNQVLLQKDDVKDVLESYCIV-----------------------------------------GFPHIILVDPE 119 (152)
T ss_dssp HHHHTCCSEEEEECHHHHHHHHHHTTCC-----------------------------------------SSCEEEEECTT
T ss_pred HHHhCCCCeEEecccchhHHHHHHhCCC-----------------------------------------cCCeEEEECCC
Confidence 99999999999998 56666666542 14578999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025441 225 KSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 225 gg~I~~~h~~~~~~D~~~~~eIL~al 250 (252)
|+|++.+.. -.++++.|+.+
T Consensus 120 -G~i~~~~~~-----~~~l~~~l~~l 139 (152)
T 2lrn_A 120 -GKIVAKELR-----GDDLYNTVEKF 139 (152)
T ss_dssp -SEEEEECCC-----TTHHHHHHHHH
T ss_pred -CeEEEeeCC-----HHHHHHHHHHH
Confidence 699998742 23455555544
No 60
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.85 E-value=8.5e-21 Score=152.36 Aligned_cols=120 Identities=13% Similarity=0.138 Sum_probs=103.6
Q ss_pred ccCCCCCcEEecC--CCCeEeCCCccCCCeEEEEEEcCCCCHhhHHH-HHHHHHhHHHHHhCCCEEEEEec-------CC
Q 025441 71 TKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVALVLIGP-------GS 140 (252)
Q Consensus 71 ~g~~apdf~L~d~--~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~e-l~~L~~~~~~~~~~Gv~vVaVs~-------d~ 140 (252)
.|+.+|+|++.|. +|+.++++++ +++++|++||++||++|+.+ ++.|+++++++.+.|+.+|+|+. ++
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~--~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 79 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADL--RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMT 79 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGG--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred CCCcCCCceehhhhcCCCccCHHHh--CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCC
Confidence 5889999999994 8899999998 45677888889999999997 99999999999888999999995 57
Q ss_pred HHHHHHHHHHcCCcceeeecCCh-----HHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCcccc
Q 025441 141 VEQARTFSEQTKFKGEVYADPNH-----SSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 215 (252)
Q Consensus 141 ~~~~~~f~~~~~l~fpllsDp~~-----~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~ 215 (252)
.+.+++|+++++++|+++.|++. .+.+.||+. ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~-----------------------------------------~~ 118 (158)
T 3eyt_A 80 PISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMR-----------------------------------------GT 118 (158)
T ss_dssp HHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCC-----------------------------------------SS
T ss_pred HHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCC-----------------------------------------CC
Confidence 88999999999999999999887 456655532 14
Q ss_pred ceEEEEeCCCCeEEEEEeC
Q 025441 216 GGIIVAGPGKSNISYIHRD 234 (252)
Q Consensus 216 gg~fVid~ggg~I~~~h~~ 234 (252)
|.+||||++ |+|++.+.+
T Consensus 119 P~~~lid~~-G~i~~~~~g 136 (158)
T 3eyt_A 119 PSLLLIDKA-GDLRAHHFG 136 (158)
T ss_dssp SEEEEECTT-SEEEEEEES
T ss_pred CEEEEECCC-CCEEEEEeC
Confidence 579999998 699999886
No 61
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.85 E-value=2.6e-20 Score=148.70 Aligned_cols=132 Identities=19% Similarity=0.215 Sum_probs=110.0
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC-CHHHHHHHH
Q 025441 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFS 148 (252)
Q Consensus 70 ~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d-~~~~~~~f~ 148 (252)
++|+.+|+|++.|.+|+.++++++ +++.+|++|++.||++|+.+++.|.++++++.+.++.+++|+.+ +.+.+++|.
T Consensus 1 ~~G~~~p~~~l~~~~g~~~~l~~~--~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~ 78 (151)
T 2f9s_A 1 SEGSDAPNFVLEDTNGKRIELSDL--KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFM 78 (151)
T ss_dssp -CCEECCCCEEECTTCCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHH
T ss_pred CCCCcCCcceeEcCCCCEEEHHHc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence 368999999999999999999998 34556666779999999999999999999999889999999986 457899999
Q ss_pred HHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCCeE
Q 025441 149 EQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNI 228 (252)
Q Consensus 149 ~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~I 228 (252)
++++++|+++.|++..+.+.||+.. .|..||+|++ |+|
T Consensus 79 ~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~-G~i 116 (151)
T 2f9s_A 79 KSYGVNFPVVLDTDRQVLDAYDVSP-----------------------------------------LPTTFLINPE-GKV 116 (151)
T ss_dssp HHHTCCSCEEEETTSHHHHHTTCCS-----------------------------------------SCEEEEECTT-SEE
T ss_pred HHcCCCceEEECCchHHHHhcCCCC-----------------------------------------CCeEEEECCC-CcE
Confidence 9999999999999988888776431 3468999998 699
Q ss_pred EEEEeCCCCCCCCCHHHHHHHh
Q 025441 229 SYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 229 ~~~h~~~~~~D~~~~~eIL~al 250 (252)
++.+.+. .+.+++.+.+
T Consensus 117 ~~~~~G~-----~~~~~l~~~l 133 (151)
T 2f9s_A 117 VKVVTGT-----MTESMIHDYM 133 (151)
T ss_dssp EEEEESC-----CCHHHHHHHH
T ss_pred EEEEeCC-----CCHHHHHHHH
Confidence 9988753 2455555443
No 62
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.84 E-value=5.7e-21 Score=150.75 Aligned_cols=135 Identities=13% Similarity=0.032 Sum_probs=114.3
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC-CHHHHHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQART 146 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d-~~~~~~~ 146 (252)
...+|+.+|+|++.|.+|+.++++++ +++.+|++|++.||++|+.+++.|.++++++.+.|+.+++|+.+ +.+.+++
T Consensus 4 ~~~~G~~~p~~~l~~~~g~~~~l~~~--~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 81 (148)
T 3hcz_A 4 PLLLGKKAPNLYMTDTTGTYRYLYDV--QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLK 81 (148)
T ss_dssp CCCTTSBCCCCCCBCTTSCBCCGGGC--CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHH
T ss_pred ccCCCCcCCceEEecCCCCEEEhHHc--CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHH
Confidence 35889999999999999999999998 45567777889999999999999999999999999999999998 5589999
Q ss_pred HHHHcCCc-ceeeecCChH--HHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeC
Q 025441 147 FSEQTKFK-GEVYADPNHS--SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 147 f~~~~~l~-fpllsDp~~~--ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ 223 (252)
|.++++++ |+++.|++.. +.+.||+. ..|..||+|+
T Consensus 82 ~~~~~~~~~~~~~~d~~~~~~~~~~~~i~-----------------------------------------~~P~~~lid~ 120 (148)
T 3hcz_A 82 FIRSKKIGGWLNVRDSKNHTDFKITYDIY-----------------------------------------ATPVLYVLDK 120 (148)
T ss_dssp HHHHHTCTTSEEEECTTCCCCHHHHHCCC-----------------------------------------SSCEEEEECT
T ss_pred HHHHcCCCCceEEeccccchhHHHhcCcC-----------------------------------------CCCEEEEECC
Confidence 99999999 9999998876 66666532 1457899999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 224 GKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 224 ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+ |+|.+.+.+. .+++++++.+.
T Consensus 121 ~-G~i~~~~~g~-----~~~~~~l~~l~ 142 (148)
T 3hcz_A 121 N-KVIIAKRIGY-----ENLDDFLVQYE 142 (148)
T ss_dssp T-CBEEEESCCG-----GGHHHHHHHHH
T ss_pred C-CcEEEecCCH-----HHHHHHHHHHH
Confidence 8 6999887542 67777777653
No 63
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.84 E-value=1.4e-20 Score=151.12 Aligned_cols=122 Identities=19% Similarity=0.189 Sum_probs=106.4
Q ss_pred cccCCCCCcEEec-CCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHH-HHHHHHhHHHHHhCCCEEEEEec-------CC
Q 025441 70 DTKNLLDTVKVYD-VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVALVLIGP-------GS 140 (252)
Q Consensus 70 ~~g~~apdf~L~d-~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~e-l~~L~~~~~~~~~~Gv~vVaVs~-------d~ 140 (252)
-.|.++|+|++.| .+|+.++++++ +++++|++||++||++|+.| ++.|+++++++.+.|+.+|+|+. ++
T Consensus 4 ~~g~~~p~~~~~~~~~g~~~~l~~~--~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 81 (160)
T 3lor_A 4 LDNAPLLELDVQEWVNHEGLSNEDL--RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMT 81 (160)
T ss_dssp CTTCCBCCCCEEEESSSCCCCHHHH--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred cCCCcCCCcccccccCCCccCHHHh--CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCC
Confidence 3689999999999 89999999998 45678888899999999996 99999999999999999999997 68
Q ss_pred HHHHHHHHHHcCCcceeeecCChH------HHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccc
Q 025441 141 VEQARTFSEQTKFKGEVYADPNHS------SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQ 214 (252)
Q Consensus 141 ~~~~~~f~~~~~l~fpllsDp~~~------ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q 214 (252)
.+.+++|.++++++|+++.|++.. +++.||+. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~-----------------------------------------~ 120 (160)
T 3lor_A 82 PEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLE-----------------------------------------G 120 (160)
T ss_dssp HHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCC-----------------------------------------S
T ss_pred HHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccC-----------------------------------------c
Confidence 899999999999999999998877 66666542 1
Q ss_pred cceEEEEeCCCCeEEEEEeCC
Q 025441 215 QGGIIVAGPGKSNISYIHRDK 235 (252)
Q Consensus 215 ~gg~fVid~ggg~I~~~h~~~ 235 (252)
.|..||||++ |+|++.|.+.
T Consensus 121 ~P~~~lid~~-G~i~~~~~g~ 140 (160)
T 3lor_A 121 TPSIILADRK-GRIRQVQFGQ 140 (160)
T ss_dssp SSEEEEECTT-SBEEEEEESC
T ss_pred cceEEEECCC-CcEEEEecCc
Confidence 4578999998 6999998863
No 64
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.84 E-value=4.2e-20 Score=147.29 Aligned_cols=133 Identities=12% Similarity=0.158 Sum_probs=111.7
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe--cCCHHHHHHH
Q 025441 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG--PGSVEQARTF 147 (252)
Q Consensus 70 ~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs--~d~~~~~~~f 147 (252)
.+|+.+|+|++.|.+|+.++++++ +++.+|++|++.||++|+.+++.|+++++++.+.|+.+++|+ .++.+.+++|
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~ 80 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADL--QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQY 80 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHH--TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHh--CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHH
Confidence 579999999999999999999998 445666677799999999999999999999999999999999 5677899999
Q ss_pred HHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCCe
Q 025441 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 227 (252)
.++++++|+++.|++..+.+.||+.. .|..||+|++ |+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~i~~-----------------------------------------~P~~~lid~~-G~ 118 (153)
T 2l5o_A 81 VKDYGLPFTVMYDADKAVGQAFGTQV-----------------------------------------YPTSVLIGKK-GE 118 (153)
T ss_dssp HHHTTCCSEEEECSSCHHHHHHTCCS-----------------------------------------SSEEEEECSS-SC
T ss_pred HHHcCCCceEEcCchHHHHHHcCCCc-----------------------------------------cCeEEEECCC-Cc
Confidence 99999999999999888887776431 3468999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 228 ISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 228 I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|++.+.+ ..+.+++++.++
T Consensus 119 i~~~~~g-----~~~~~~l~~~l~ 137 (153)
T 2l5o_A 119 ILKTYVG-----EPDFGKLYQEID 137 (153)
T ss_dssp CCEEEES-----SCCHHHHHHHHH
T ss_pred EEEEEcC-----CCCHHHHHHHHH
Confidence 9988875 356666666553
No 65
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.84 E-value=9.5e-21 Score=157.33 Aligned_cols=91 Identities=8% Similarity=0.129 Sum_probs=79.8
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC--------
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d-------- 139 (252)
..++|+.+|+|++.|.+|+.++++++ +++++|++||++|||+|+.+++.|+++++++.+.|+++|+|+.+
T Consensus 22 ~~~~g~~~p~f~l~~~~G~~~~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~ 99 (181)
T 2p31_A 22 SMQQEQDFYDFKAVNIRGKLVSLEKY--RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPD 99 (181)
T ss_dssp -----CCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCS
T ss_pred cCCcCCccCceEeecCCCCEecHHHc--CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCC
Confidence 56899999999999999999999998 45678888899999999999999999999999999999999975
Q ss_pred CHHHHHHHHHH-cCCcceeeec
Q 025441 140 SVEQARTFSEQ-TKFKGEVYAD 160 (252)
Q Consensus 140 ~~~~~~~f~~~-~~l~fpllsD 160 (252)
+.+.+++|+++ ++++||++.|
T Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~ 121 (181)
T 2p31_A 100 SNKEIESFARRTYSVSFPMFSK 121 (181)
T ss_dssp CHHHHHHHHHHHHCCCSCBBCC
T ss_pred CHHHHHHHHHhhcCCCceeEee
Confidence 57889999999 9999999965
No 66
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.84 E-value=2.5e-20 Score=155.31 Aligned_cols=93 Identities=10% Similarity=0.088 Sum_probs=84.0
Q ss_pred CCCccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC------
Q 025441 66 SVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------ 139 (252)
Q Consensus 66 ~~~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d------ 139 (252)
....++|+.+|+|++.|.+|+.++++++ +++++|++||++|||+|+.+++.|+++++++++.|+++|+|+.|
T Consensus 20 ~~~~~~g~~~p~f~l~~~~G~~v~l~~~--~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~ 97 (185)
T 2gs3_A 20 FQSMRCARSMHEFSAKDIDGHMVNLDKY--RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQE 97 (185)
T ss_dssp SGGGGGCCCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCC
T ss_pred hhhccCCCCcCCceeEcCCCCEeeHHHc--CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCC
Confidence 3456889999999999999999999998 45678888899999999999999999999999999999999875
Q ss_pred --CHHHHHHHHHHcCCcceeeec
Q 025441 140 --SVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 140 --~~~~~~~f~~~~~l~fpllsD 160 (252)
+.+.+++|+++++++||++.|
T Consensus 98 ~~~~~~~~~~~~~~~~~~p~~~~ 120 (185)
T 2gs3_A 98 PGSNEEIKEFAAGYNVKFDMFSK 120 (185)
T ss_dssp CSCHHHHHHHHHHTTCCSEEBCC
T ss_pred CCCHHHHHHHHHHcCCCCeeeee
Confidence 467899999999999999974
No 67
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.84 E-value=6e-20 Score=152.31 Aligned_cols=102 Identities=16% Similarity=0.126 Sum_probs=91.7
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec--------C
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~--------d 139 (252)
..++|+.+|+|++.|.+|+.++++++ +++++|++|+++||++|+.+++.|+++++++.+. +.+|+|+. +
T Consensus 6 ~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d 82 (188)
T 2cvb_A 6 ELPLESPLIDAELPDPRGGRYRLSQF--HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPED 82 (188)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGC--CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGG
T ss_pred cCCCCCCCCCceeecCCCCEEeHHHh--CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCcccccccc
Confidence 46889999999999999999999998 3466777778999999999999999999999888 99999998 5
Q ss_pred CHHHHHHHHHHcCCcceeeecCChHHHHHcCCc
Q 025441 140 SVEQARTFSEQTKFKGEVYADPNHSSYEALSFV 172 (252)
Q Consensus 140 ~~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~ 172 (252)
+.+.+++|.++++++|+++.|++..+.+.||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 115 (188)
T 2cvb_A 83 APEKMAAFAEEHGIFFPYLLDETQEVAKAYRAL 115 (188)
T ss_dssp SHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCC
T ss_pred CHHHHHHHHHHhCCCceEEECCcchHHHHcCCC
Confidence 778999999999999999999999988888743
No 68
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.84 E-value=6.8e-20 Score=147.88 Aligned_cols=131 Identities=12% Similarity=0.134 Sum_probs=106.7
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH-HHHHHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTF 147 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~-~~~~~f 147 (252)
...|+.+|+|++.|.+|+.++++++ +++.+|++||++||++|+.+++.|+++++++.+.|+.+|+|+.++. +..++|
T Consensus 9 ~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~ 86 (152)
T 2lrt_A 9 KIKEASIIDIQLKDLKGNTRSLTDL--KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTS 86 (152)
T ss_dssp SSCTTCSCCCCEEBTTSCEECTTTG--GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHH
T ss_pred hccCCCCCCeEEEcCCCCEEeHHHh--CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 4678999999999999999999998 3456777778999999999999999999999999999999999876 466777
Q ss_pred HHHcCCcceeeecCChH---HHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCC
Q 025441 148 SEQTKFKGEVYADPNHS---SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 224 (252)
Q Consensus 148 ~~~~~l~fpllsDp~~~---ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~g 224 (252)
.+ +++|+++.|++.. +.+.||+. ..|.+||||++
T Consensus 87 ~~--~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~ 123 (152)
T 2lrt_A 87 AD--NLPWVCVRDANGAYSSYISLYNVT-----------------------------------------NLPSVFLVNRN 123 (152)
T ss_dssp HT--TCSSEEEECSSGGGCHHHHHHTCC-----------------------------------------SCSEEEEEETT
T ss_pred Hh--CCCceEEECCCCcchHHHHHcCcc-----------------------------------------cCceEEEECCC
Confidence 65 4899999998876 66666532 14579999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025441 225 KSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 225 gg~I~~~h~~~~~~D~~~~~eIL~al 250 (252)
|+|++.+.+ ..++++.+..+
T Consensus 124 -G~i~~~~~g-----~~~~e~~~~~~ 143 (152)
T 2lrt_A 124 -NELSARGEN-----IKDLDEAIKKL 143 (152)
T ss_dssp -TEEEEETTT-----CSCHHHHHHHH
T ss_pred -CeEEEecCC-----HHHHHHHHHHH
Confidence 699988754 35666666554
No 69
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.84 E-value=4.7e-20 Score=152.17 Aligned_cols=143 Identities=13% Similarity=0.153 Sum_probs=113.0
Q ss_pred cccCCCC-CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCH-hhHHHHHHHHHhHHHHHh--CCCEEEEEecC---CHH
Q 025441 70 DTKNLLD-TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDA--SGVALVLIGPG---SVE 142 (252)
Q Consensus 70 ~~g~~ap-df~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp-~C~~el~~L~~~~~~~~~--~Gv~vVaVs~d---~~~ 142 (252)
.+|+.+| +|+|.|.+|+.++++++ +++++|++||++||| .|..+++.|+++++++.+ .++++|+|+.| +++
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~--~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~ 79 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNL--KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLE 79 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGG--TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHH
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHh--CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHH
Confidence 5799999 99999999999999998 356788888999998 799999999999999975 56999999976 678
Q ss_pred HHHHHHHHcCCccee----e-ec--CChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCcccc
Q 025441 143 QARTFSEQTKFKGEV----Y-AD--PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 215 (252)
Q Consensus 143 ~~~~f~~~~~l~fpl----l-sD--p~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~ 215 (252)
.+++|+++++++++. + .| ...+++++||+..... + .+....
T Consensus 80 ~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~-----------------~---------------~~~~~~ 127 (170)
T 3me7_A 80 DIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTA-----------------G---------------NDFIHP 127 (170)
T ss_dssp HHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEE-----------------T---------------TEEECC
T ss_pred HHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecC-----------------C---------------CccccC
Confidence 999999999988762 2 23 3467788887653210 0 001235
Q ss_pred ceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 216 GGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 216 gg~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+.+||||++ |+|++.|.+. .++.++|+++++
T Consensus 128 ~~~~lID~~-G~i~~~~~g~----~~~~~~i~~~l~ 158 (170)
T 3me7_A 128 NVVVVLSPE-LQIKDYIYGV----NYNYLEFVNALR 158 (170)
T ss_dssp CEEEEECTT-SBEEEEEESS----SCCHHHHHHHHH
T ss_pred ceEEEECCC-CeEEEEEeCC----CCCHHHHHHHHH
Confidence 679999999 6999998654 466888888775
No 70
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.83 E-value=1.4e-19 Score=149.72 Aligned_cols=122 Identities=13% Similarity=0.026 Sum_probs=103.7
Q ss_pred CCCccccCCCCCcEEecCCC--CeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec-CCHH
Q 025441 66 SVSEDTKNLLDTVKVYDVNG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-GSVE 142 (252)
Q Consensus 66 ~~~~~~g~~apdf~L~d~~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~-d~~~ 142 (252)
.+...+|+.+|+|++.|.+| +.++++++ .++.+|++||++||++|+.+++.|++++++ |+.+|+|+. ++.+
T Consensus 27 ~~~~~~G~~~P~f~l~~~~g~~~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~ 100 (176)
T 3kh7_A 27 LPSALIGKPFPAFDLPSVQDPARRLTEADL--KGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNA 100 (176)
T ss_dssp STTTTTTSBCCCCEEEBSSCTTSEEEGGGG--CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHH
T ss_pred ccccccCCcCCCcEecccCCCCceecHHHh--CCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHH
Confidence 34578999999999999999 89999998 345667777799999999999999988765 899999994 6778
Q ss_pred HHHHHHHHcCCcce-eeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEE
Q 025441 143 QARTFSEQTKFKGE-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 143 ~~~~f~~~~~l~fp-llsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 221 (252)
.+++|.++++++|+ ++.|++..+.+.||+.. .|.+|||
T Consensus 101 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~li 139 (176)
T 3kh7_A 101 AAIKWLNELHNPYLLSISDADGTLGLDLGVYG-----------------------------------------APETYLI 139 (176)
T ss_dssp HHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS-----------------------------------------SCEEEEE
T ss_pred HHHHHHHHcCCCCceEEECCcchHHHHcCCCC-----------------------------------------CCeEEEE
Confidence 99999999999998 68999988888776431 3569999
Q ss_pred eCCCCeEEEEEeCC
Q 025441 222 GPGKSNISYIHRDK 235 (252)
Q Consensus 222 d~ggg~I~~~h~~~ 235 (252)
|++ |+|++.+.+.
T Consensus 140 d~~-G~i~~~~~g~ 152 (176)
T 3kh7_A 140 DKQ-GIIRHKIVGV 152 (176)
T ss_dssp CTT-CBEEEEEESC
T ss_pred CCC-CeEEEEEcCC
Confidence 998 6999998764
No 71
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.83 E-value=2.1e-20 Score=154.91 Aligned_cols=93 Identities=11% Similarity=0.142 Sum_probs=84.5
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec--------C
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~--------d 139 (252)
....|+.+|+|+|.|.+|+.++++++ ++++||++||++|||+|+.+++.|+++++++++.|+.||+|+. +
T Consensus 11 ~~~~~~~~p~f~l~d~~G~~v~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d 88 (180)
T 3kij_A 11 LKPKINSFYAFEVKDAKGRTVSLEKY--KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPR 88 (180)
T ss_dssp CCCCCCCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCS
T ss_pred hcCCcCcccceEEecCCCCEecHHHc--CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCC
Confidence 35679999999999999999999998 5568999999999999999999999999999999999999995 4
Q ss_pred CHHHHHHHHHH-cCCcceeeecCC
Q 025441 140 SVEQARTFSEQ-TKFKGEVYADPN 162 (252)
Q Consensus 140 ~~~~~~~f~~~-~~l~fpllsDp~ 162 (252)
+.+.+++|+++ ++++|+++.|.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~d 112 (180)
T 3kij_A 89 PSKEVESFARKNYGVTFPIFHKIK 112 (180)
T ss_dssp CHHHHHHHHHHHHCCCSCBBCCCC
T ss_pred CHHHHHHHHHHhcCCCCceeeeee
Confidence 67899999999 999999987543
No 72
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.83 E-value=6.4e-20 Score=148.51 Aligned_cols=94 Identities=14% Similarity=0.210 Sum_probs=82.1
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC--------C
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d--------~ 140 (252)
.++|+.+|+|++.|.+|+.++++++ +++++|++||++|||+|+.+++.|+++++++.+.|+++|+|+.+ +
T Consensus 5 ~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 82 (169)
T 2v1m_A 5 HKSWNSIYEFTVKDINGVDVSLEKY--RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWA 82 (169)
T ss_dssp --CCCSGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred ccCCcccccceeecCCCCCccHHHc--CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCC
Confidence 5789999999999999999999998 45677778899999999999999999999999999999999975 4
Q ss_pred HHHHHHH-HHHcCCcceeee--cCChH
Q 025441 141 VEQARTF-SEQTKFKGEVYA--DPNHS 164 (252)
Q Consensus 141 ~~~~~~f-~~~~~l~fplls--Dp~~~ 164 (252)
.+.+++| .++++++||++. |.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 83 EAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp HHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred HHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 6789999 599999999996 65543
No 73
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.83 E-value=4.7e-20 Score=145.42 Aligned_cols=122 Identities=10% Similarity=0.004 Sum_probs=104.1
Q ss_pred CccccCCCCCcEEecCCCCeEeCC--CccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHH-HhCCCEEEEEecCCH-HH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPIS--DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVM-DASGVALVLIGPGSV-EQ 143 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls--~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~-~~~Gv~vVaVs~d~~-~~ 143 (252)
...+|+.+|+|++.|.+|+.++++ ++ +++.+|++|++.||++|+.+++.|.++++++ .+.|+.+++|+.+.. +.
T Consensus 4 ~~~~g~~~p~~~l~~~~g~~~~l~~~~~--~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~ 81 (148)
T 3fkf_A 4 KVTVGKSAPYFSLPNEKGEKLSRSAERF--RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREA 81 (148)
T ss_dssp -CCTTSBCCCCCEEBTTSCEECTTSTTT--TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHH
T ss_pred cccCCCcCCCeEeeCCCCCEEecccccc--CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHH
Confidence 468899999999999999999999 88 4456777777999999999999999999999 888999999998854 68
Q ss_pred HHHHHHHcCCcceeeecC---ChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEE
Q 025441 144 ARTFSEQTKFKGEVYADP---NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 220 (252)
Q Consensus 144 ~~~f~~~~~l~fpllsDp---~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fV 220 (252)
.++|.++++++|+++.|+ +..+.+.||+. ..|..||
T Consensus 82 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~l 120 (148)
T 3fkf_A 82 WETAIKKDTLSWDQVCDFTGLSSETAKQYAIL-----------------------------------------TLPTNIL 120 (148)
T ss_dssp HHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC-----------------------------------------SSSEEEE
T ss_pred HHHHHHHcCCCceEEEccCCcchHHHHhcCCC-----------------------------------------CcCEEEE
Confidence 899999999999999998 55666666533 1457899
Q ss_pred EeCCCCeEEEEEe
Q 025441 221 AGPGKSNISYIHR 233 (252)
Q Consensus 221 id~ggg~I~~~h~ 233 (252)
+|++ |+|.+.+.
T Consensus 121 id~~-G~i~~~~~ 132 (148)
T 3fkf_A 121 LSPT-GKILARDI 132 (148)
T ss_dssp ECTT-SBEEEESC
T ss_pred ECCC-CeEEEecC
Confidence 9998 69998875
No 74
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.83 E-value=2e-19 Score=141.09 Aligned_cols=133 Identities=13% Similarity=0.150 Sum_probs=109.2
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC----CHHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQ 143 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d----~~~~ 143 (252)
...+|+.+|+|++.|.+|+.+++++ +++++ |++|++.||++|+.+++.|.++++++.+.++.++.|+.+ +.+.
T Consensus 8 ~~~~g~~~p~~~l~~~~g~~~~l~~--~gk~~-ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~ 84 (145)
T 3erw_A 8 EEKQPAVPAVFLMKTIEGEDISIPN--KGQKT-ILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQV 84 (145)
T ss_dssp ----CCSCCEEEEECTTSCEEEESC--TTSEE-EEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHH
T ss_pred cccCCCcCCCceeecCCCCEEeHHH--CCCEE-EEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHH
Confidence 3578999999999999999999999 45554 555569999999999999999999998789999999985 6789
Q ss_pred HHHHHHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeC
Q 025441 144 ARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 144 ~~~f~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ 223 (252)
+++|.++++++|+++.|++..+.+.||+. ..|..||+|+
T Consensus 85 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid~ 123 (145)
T 3erw_A 85 VEDFIKANKLTFPIVLDSKGELMKEYHII-----------------------------------------TIPTSFLLNE 123 (145)
T ss_dssp HHHHHHHTTCCSCEEECSSSHHHHHTTCC-----------------------------------------EESEEEEECT
T ss_pred HHHHHHHcCCceeEEEcCchhHHHhcCcC-----------------------------------------ccCeEEEEcC
Confidence 99999999999999999999888887753 1356899999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025441 224 GKSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 224 ggg~I~~~h~~~~~~D~~~~~eIL~al 250 (252)
+ |+|.+.+.+ ..+.+++.+.+
T Consensus 124 ~-G~i~~~~~g-----~~~~~~l~~~l 144 (145)
T 3erw_A 124 K-GEIEKTKIG-----PMTAEQLKEWT 144 (145)
T ss_dssp T-CCEEEEEES-----CCCHHHHHHHH
T ss_pred C-CcEEEEEcC-----CcCHHHHHHhh
Confidence 8 699998875 24566666654
No 75
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.83 E-value=2.5e-19 Score=144.26 Aligned_cols=127 Identities=13% Similarity=0.097 Sum_probs=105.8
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC-HHHHHHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTF 147 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~-~~~~~~f 147 (252)
.++|+.+|+|++.|.+|+.++++++ +++.+|++|++.||++|+.+++.|.++++++.+.|+.+|+|+.++ .+.+++|
T Consensus 8 ~~~g~~~p~~~l~~~~g~~~~l~~~--~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~ 85 (165)
T 3or5_A 8 DARPTPAPSFSGVTVDGKPFSSASL--KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNY 85 (165)
T ss_dssp CCCCCBCCCCEEECTTSCEEEGGGG--TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHH
T ss_pred hcCCCCCCCceeeCCCCCEechhHc--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHH
Confidence 5789999999999999999999998 345566667799999999999999999999999999999999876 6788999
Q ss_pred HHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCCe
Q 025441 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 227 (252)
.++++++|+++.|.+ .+.+.|+..... +....|..||+|++ |+
T Consensus 86 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------------------------------~i~~~P~~~lid~~-G~ 128 (165)
T 3or5_A 86 MKTQGIIYPVMMATP-ELIRAFNGYIDG-----------------------------------GITGIPTSFVIDAS-GN 128 (165)
T ss_dssp HHHHTCCSCEEECCH-HHHHHHHTTSTT-----------------------------------CSCSSSEEEEECTT-SB
T ss_pred HHHcCCCCceEecCH-HHHHHHhhhhcc-----------------------------------CCCCCCeEEEECCC-Cc
Confidence 999999999999876 666666432110 11236789999998 69
Q ss_pred EEEEEeC
Q 025441 228 ISYIHRD 234 (252)
Q Consensus 228 I~~~h~~ 234 (252)
|++.+.+
T Consensus 129 i~~~~~g 135 (165)
T 3or5_A 129 VSGVIVG 135 (165)
T ss_dssp EEEEECS
T ss_pred EEEEEcC
Confidence 9988875
No 76
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.82 E-value=1.1e-19 Score=147.32 Aligned_cols=94 Identities=13% Similarity=0.159 Sum_probs=80.9
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC--------C
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d--------~ 140 (252)
.++|+.+|+|++.|.+|+.++++++ +++++|++||++||++|+.+++.|+++++++++.|+++|+|+.| +
T Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~--~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~ 83 (170)
T 2p5q_A 6 SKNPESVHDFTVKDAKENDVDLSIF--KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGT 83 (170)
T ss_dssp ----CCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred CCCCccccceEEEcCCCCEecHHHh--CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCC
Confidence 5789999999999999999999998 45677888889999999999999999999999999999999974 5
Q ss_pred HHHHHHHHH-HcCCcceee--ecCChH
Q 025441 141 VEQARTFSE-QTKFKGEVY--ADPNHS 164 (252)
Q Consensus 141 ~~~~~~f~~-~~~l~fpll--sDp~~~ 164 (252)
.+.+++|++ +++++|+++ .|++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 84 NDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp HHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred HHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 788999999 789999999 576543
No 77
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.82 E-value=1.3e-19 Score=144.84 Aligned_cols=131 Identities=14% Similarity=0.142 Sum_probs=108.3
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec---CCHHHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP---GSVEQA 144 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~---d~~~~~ 144 (252)
..++|+.+|+|++.|.+|+.++++++ + +.+|++|++.||++|+.+++.|.++++++ ++.+++|+. ++.+.+
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~~~-~--k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~ 77 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPATV-S--KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVV 77 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTTTS-C--SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHH
T ss_pred cCCCCCcCCceEEECCCCCEechHHc-C--CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHH
Confidence 36889999999999999999999998 3 45666667999999999999999999988 899999999 778999
Q ss_pred HHHHHHcCCcceeeec---CChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEE
Q 025441 145 RTFSEQTKFKGEVYAD---PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 145 ~~f~~~~~l~fpllsD---p~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 221 (252)
++|.++++++|+++.| .+..+++.||+. ..|..||+
T Consensus 78 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~li 116 (154)
T 3ia1_A 78 LEYMKTYPRFIPLLASDRDRPHEVAARFKVL-----------------------------------------GQPWTFVV 116 (154)
T ss_dssp HHHHTTCTTEEECBCCSSCCHHHHHTTSSBC-----------------------------------------SSCEEEEE
T ss_pred HHHHHHcCCCcccccccccchHHHHHHhCCC-----------------------------------------cccEEEEE
Confidence 9999999999999998 555555555432 24579999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 222 GPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 222 d~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|++ |+|++.+.+ ..+.+++.+.++
T Consensus 117 d~~-G~i~~~~~g-----~~~~~~l~~~l~ 140 (154)
T 3ia1_A 117 DRE-GKVVALFAG-----RAGREALLDALL 140 (154)
T ss_dssp CTT-SEEEEEEES-----BCCHHHHHHHHH
T ss_pred CCC-CCEEEEEcC-----CCCHHHHHHHHH
Confidence 998 699998875 245666666554
No 78
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.82 E-value=3.5e-20 Score=150.46 Aligned_cols=149 Identities=8% Similarity=0.043 Sum_probs=118.0
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHh-hHHHHHHHHHhHHHHHhC---CCEEEEEecC----C
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDAS---GVALVLIGPG----S 140 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~-C~~el~~L~~~~~~~~~~---Gv~vVaVs~d----~ 140 (252)
..+|+.+|+|++.|.+| .++++++ +++++|++||++||+. |+.+++.|+++++++.+. ++++|+|+.| +
T Consensus 10 ~~~G~~~p~f~l~~~~g-~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~ 86 (172)
T 2k6v_A 10 RLLNPKPVDFALEGPQG-PVRLSQF--QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDP 86 (172)
T ss_dssp EEEEEEECCCEEECSSS-EEEGGGS--TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCC
T ss_pred cccCCCCCCeEEEcCCC-CCcHHHh--CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCC
Confidence 45789999999999999 9999998 4567888889999996 999999999999998875 7999999965 5
Q ss_pred HHHHHHHHHHcCCcceeeecCC---hHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccce
Q 025441 141 VEQARTFSEQTKFKGEVYADPN---HSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 141 ~~~~~~f~~~~~l~fpllsDp~---~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 217 (252)
++.+++|+++++++|++++|++ .++.++||+...... .. ....+ . ....|.
T Consensus 87 ~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~----~~-----------~~~~~--~---------i~~~P~ 140 (172)
T 2k6v_A 87 PEVADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQ----YR-----------GPGEY--L---------VDHTAT 140 (172)
T ss_dssp HHHHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEE----EE-----------ETTEE--E---------EEECCC
T ss_pred HHHHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEecc----CC-----------CCCCc--e---------EecCCE
Confidence 6899999999999999999998 688999998644210 00 00000 0 013678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+|||| + |+|++.|.+.. .++.++|++.++
T Consensus 141 ~~lid-~-G~i~~~~~g~~---~~~~~~l~~~l~ 169 (172)
T 2k6v_A 141 TFVVK-E-GRLVLLYSPDK---AEATDRVVADLQ 169 (172)
T ss_dssp EEEEE-T-TEEEEEECHHH---HTCHHHHHHHHH
T ss_pred EEEEE-C-CEEEEEECCCC---CCCHHHHHHHHH
Confidence 99999 8 69999987643 446778877765
No 79
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.82 E-value=7.4e-20 Score=153.02 Aligned_cols=94 Identities=10% Similarity=0.123 Sum_probs=82.4
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC--------
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d-------- 139 (252)
..+.++.+|+|++.|.+|+.++++++ +++++|++||++|||+|+.+++.|+++++++.+.|+++|+|+.|
T Consensus 21 ~~~~~~~~p~f~l~~~~G~~~~l~~~--~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 98 (190)
T 2vup_A 21 HMSAASSIFDFEVLDADHKPYNLVQH--KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPG 98 (190)
T ss_dssp ---CCCSGGGSCCBBTTSSBCCGGGG--TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCS
T ss_pred cCCCCCcccCeEEEcCCCCEEEHHHc--CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCC
Confidence 46889999999999999999999998 44567777899999999999999999999999999999999987
Q ss_pred CHHHHHHHH-HHcCCcceeee--cCCh
Q 025441 140 SVEQARTFS-EQTKFKGEVYA--DPNH 163 (252)
Q Consensus 140 ~~~~~~~f~-~~~~l~fplls--Dp~~ 163 (252)
+.+.+++|+ ++++++|+++. |++.
T Consensus 99 ~~~~~~~~~~~~~~~~~p~l~~~D~~~ 125 (190)
T 2vup_A 99 NEEEIKEFVCTKFKAEFPIMAKINVNG 125 (190)
T ss_dssp CHHHHHHHHHHHHCCCSCBBCCCBSSS
T ss_pred CHHHHHHHHHHhcCCCeEEEeecccCc
Confidence 678999999 89999999997 5443
No 80
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.82 E-value=2.4e-19 Score=154.82 Aligned_cols=89 Identities=9% Similarity=0.044 Sum_probs=80.2
Q ss_pred ccCCCCCcEEecCC-CCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC--------CH
Q 025441 71 TKNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------SV 141 (252)
Q Consensus 71 ~g~~apdf~L~d~~-G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d--------~~ 141 (252)
....+|+|++.|.+ |+.++|+++ ++++||++||++||++|+ |+++|+++++++++.|++||+|+++ +.
T Consensus 31 ~~~~~pdF~l~d~~~G~~v~Lsd~--~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~ 107 (215)
T 2i3y_A 31 EKGTIYDYEAIALNKNEYVSFKQY--VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDN 107 (215)
T ss_dssp CCCCGGGCEEEBSSSSCEEEGGGG--TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred ccCCcCCcEeeeCCCCCEEcHHHh--CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCH
Confidence 36679999999999 999999998 556888889999999999 9999999999999999999999853 56
Q ss_pred HHHHHHHH------HcCCcceeeecCC
Q 025441 142 EQARTFSE------QTKFKGEVYADPN 162 (252)
Q Consensus 142 ~~~~~f~~------~~~l~fpllsDp~ 162 (252)
+.+++|++ +++++||+++|.+
T Consensus 108 ~~i~~f~~~~~~~~~~~~~fpll~d~d 134 (215)
T 2i3y_A 108 KEILPGLKYVRPGGGFVPSFQLFEKGD 134 (215)
T ss_dssp HHHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHHhccchhccCccceeEeeec
Confidence 78999999 9999999998754
No 81
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.81 E-value=4e-19 Score=143.14 Aligned_cols=144 Identities=11% Similarity=0.061 Sum_probs=110.3
Q ss_pred CCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHh-hHHHHHHHHHhHHHHHh----CCCEEEEEecCC----HHHH
Q 025441 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDA----SGVALVLIGPGS----VEQA 144 (252)
Q Consensus 74 ~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~-C~~el~~L~~~~~~~~~----~Gv~vVaVs~d~----~~~~ 144 (252)
.+|+|++.|.+|+.++++++ +++++|++||++||+. |+.+++.|+++++++++ .++++|+|+.|. ++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~ 79 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDY--LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAI 79 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGG--TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHH
T ss_pred CCCCeEEEeCCCCEEeHHHc--CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHH
Confidence 58999999999999999998 4567888889999997 99999999999999987 499999999875 6789
Q ss_pred HHHHHHcCCcceeee---cCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEE
Q 025441 145 RTFSEQTKFKGEVYA---DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 145 ~~f~~~~~l~fplls---Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 221 (252)
++|+++++++|+++. |+...+.++||+..... +.. ....+. ....+.+|||
T Consensus 80 ~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~----~~~---------------~~~~~~-------~~~~~~~~li 133 (164)
T 2ggt_A 80 ANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPG----PKD---------------EDEDYI-------VDHTIIMYLI 133 (164)
T ss_dssp HHHHHTTCSSCEEEECCHHHHHHHHHTTTCCEEEE----EEC---------------TTSCEE-------EEECCEEEEE
T ss_pred HHHHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEec----CCC---------------CCCCee-------EeccceEEEE
Confidence 999999999999984 66678889998764321 000 000000 0124479999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 222 GPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 222 d~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|++ |+|++.+.+. .+.+++.+.++
T Consensus 134 d~~-G~i~~~~~g~-----~~~~~l~~~l~ 157 (164)
T 2ggt_A 134 GPD-GEFLDYFGQN-----KRKGEIAASIA 157 (164)
T ss_dssp CTT-SCEEEEEETT-----CCHHHHHHHHH
T ss_pred CCC-CeEEEEeCCC-----CCHHHHHHHHH
Confidence 998 6999988652 34566666553
No 82
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.81 E-value=3.1e-19 Score=152.97 Aligned_cols=88 Identities=10% Similarity=0.021 Sum_probs=78.8
Q ss_pred cCCCCCcEEecCC-CCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec--------CCHH
Q 025441 72 KNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GSVE 142 (252)
Q Consensus 72 g~~apdf~L~d~~-G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~--------d~~~ 142 (252)
.+.+|+|++.|.+ |+.++|+++ ++++||++||++|||+| .|+++|+++++++++.|++||+|+. ++.+
T Consensus 14 ~~~~pdF~l~d~~~G~~v~Ls~~--kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 14 SGTIYEYGALTIDGEEYIPFKQY--AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp -CCGGGCEEEBTTSSCEEEGGGG--TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cCccCCeEeeeCCCCCEEcHHHh--CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 4679999999999 999999998 55788899999999999 7999999999999999999999984 3567
Q ss_pred HHHHHHH------HcCCcceeeecCC
Q 025441 143 QARTFSE------QTKFKGEVYADPN 162 (252)
Q Consensus 143 ~~~~f~~------~~~l~fpllsDp~ 162 (252)
.+++|++ +++++||+++|.+
T Consensus 91 ~i~~f~~~~~~~~~~~~~fp~l~d~d 116 (207)
T 2r37_A 91 EILPTLKYVRPGGGFVPNFQLFEKGD 116 (207)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHhcchhhccCccceeeeEec
Confidence 8999999 9999999998754
No 83
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.81 E-value=2.3e-19 Score=143.63 Aligned_cols=118 Identities=12% Similarity=0.082 Sum_probs=94.7
Q ss_pred CCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 74 ~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
++|+|++. .+|+.++++++ +++++|++|+++||++|+.+++.|+++++++++.++.+|+|+.|+.+.+++|++++++
T Consensus 4 pa~~~~~~-~~G~~~~l~~~--~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~ 80 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQSL--KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPV 80 (151)
T ss_dssp ---CEEET-TTCCEECGGGC--CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCC
T ss_pred Ccchhhcc-cCCCEecHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCC
Confidence 44555544 79999999998 4567777888999999999999999999999889999999999999999999999999
Q ss_pred cceeeecCC---hHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCCeEEE
Q 025441 154 KGEVYADPN---HSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISY 230 (252)
Q Consensus 154 ~fpllsDp~---~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~I~~ 230 (252)
+|+++.|.+ ..+++.||.. ....|.+||+|++ |+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------------v~~~P~~~lid~~-G~i~~ 120 (151)
T 3raz_A 81 SYPIWRYTGANSRNFMKTYGNT---------------------------------------VGVLPFTVVEAPK-CGYRQ 120 (151)
T ss_dssp SSCEEEECCSCHHHHHHTTTCC---------------------------------------SCCSSEEEEEETT-TTEEE
T ss_pred CCceEecCccchHHHHHHhCCc---------------------------------------cCCCCEEEEECCC-CcEEE
Confidence 999998864 3344444310 0125689999998 69998
Q ss_pred EEeC
Q 025441 231 IHRD 234 (252)
Q Consensus 231 ~h~~ 234 (252)
.+.+
T Consensus 121 ~~~g 124 (151)
T 3raz_A 121 TITG 124 (151)
T ss_dssp ECCS
T ss_pred EECC
Confidence 8865
No 84
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=1.8e-21 Score=157.01 Aligned_cols=139 Identities=14% Similarity=0.179 Sum_probs=113.7
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHH-hHHHHH-hCCCEEEEEecCCH-HHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA-KKDVMD-ASGVALVLIGPGSV-EQA 144 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~-~~~~~~-~~Gv~vVaVs~d~~-~~~ 144 (252)
..++|+.+|+|++.|.+|+.++++++ +++.+|++|++.||++|+.+++.|.+ +++++. +.++.+|+|+.++. +.+
T Consensus 6 ~l~~g~~~p~f~l~~~~g~~~~l~~~--~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~ 83 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLTDGKQVTLSSL--RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKV 83 (159)
Confidence 35789999999999999999999998 44567777789999999999999998 888887 78999999998876 578
Q ss_pred HHHHHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCC
Q 025441 145 RTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 224 (252)
Q Consensus 145 ~~f~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~g 224 (252)
++|.++++++|+++.|++..++++||+... ..|..||+|++
T Consensus 84 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---------------------------------------~~P~~~lid~~ 124 (159)
T 2ls5_A 84 LAFAKSTGVTYPLGLDPGADIFAKYALRDA---------------------------------------GITRNVLIDRE 124 (159)
Confidence 899999999999999999888887775310 13468999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 225 KSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 225 gg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|+|++.+.+. +..+++++++.+.
T Consensus 125 -G~i~~~~~g~---~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 125 -GKIVKLTRLY---NEEEFASLVQQIN 147 (159)
Confidence 6999988753 2335666666543
No 85
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.80 E-value=6.6e-19 Score=150.59 Aligned_cols=91 Identities=5% Similarity=-0.018 Sum_probs=81.2
Q ss_pred cccCCCCCcEEecCC-CCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC--------C
Q 025441 70 DTKNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (252)
Q Consensus 70 ~~g~~apdf~L~d~~-G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d--------~ 140 (252)
..++.+|+|++.|.+ |+.++++++ ++++||++||++|||+|+.+++.|+++++++++.|++||+|+.+ +
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~--~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~ 98 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSL--RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAK 98 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSC
T ss_pred hhcCccCceEeeeCCCCCCccHHHc--CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCC
Confidence 447789999999999 999999998 45688889999999999999999999999999999999999975 4
Q ss_pred HHHHHHHHH------HcCCcceeeecCC
Q 025441 141 VEQARTFSE------QTKFKGEVYADPN 162 (252)
Q Consensus 141 ~~~~~~f~~------~~~l~fpllsDp~ 162 (252)
.+.+++|++ +++++||+++|.+
T Consensus 99 ~~~i~~f~~~~~~~~~~~~~fp~l~d~d 126 (208)
T 2f8a_A 99 NEEILNSLKYVRPGGGFEPNFMLFEKCE 126 (208)
T ss_dssp HHHHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHHHhcccccccccceEEEEEee
Confidence 578999998 8999999998644
No 86
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.80 E-value=3.4e-20 Score=154.94 Aligned_cols=91 Identities=9% Similarity=0.122 Sum_probs=81.0
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC--------
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d-------- 139 (252)
....+..+|+|+|.|.+|+.++++++ ++++||++||++|||+|+.+++.|+++++++++.|++||+|+.|
T Consensus 19 ~~~~~~~~p~f~l~d~~G~~~~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~ 96 (187)
T 3dwv_A 19 KMSAASSIFDFEVLDADHKPYNLVQH--KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPG 96 (187)
T ss_dssp -CTTCCSGGGSCCBBTTSCBCCGGGG--TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSS
T ss_pred hhcCCCccCCeEEEcCCCCEeeHHHh--CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCC
Confidence 34778899999999999999999998 45678888899999999999999999999999999999999975
Q ss_pred CHHHHHHHHH-HcCCcceeeec
Q 025441 140 SVEQARTFSE-QTKFKGEVYAD 160 (252)
Q Consensus 140 ~~~~~~~f~~-~~~l~fpllsD 160 (252)
+.+.+++|++ +++++||+++|
T Consensus 97 ~~~~~~~~~~~~~~~~~p~~~~ 118 (187)
T 3dwv_A 97 NEEEIKEFVCTKFKAEFPIMAK 118 (187)
T ss_dssp BTTHHHHSCCBCCCCSSCBBCC
T ss_pred CHHHHHHHHHhccCCCCceeec
Confidence 4678999998 45999999974
No 87
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.80 E-value=1.2e-18 Score=135.44 Aligned_cols=130 Identities=11% Similarity=0.119 Sum_probs=106.6
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC-HHHHHHHHHHc
Q 025441 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQT 151 (252)
Q Consensus 73 ~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~-~~~~~~f~~~~ 151 (252)
..+|+|++.|.+|+.++++++ ++++ +|++|++.||++|+.+++.|+++++++. ++.+++|+.++ .+.+++|.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~-~~k~-~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASL-QGKP-AVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGG-TTSC-EEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHh-CCCE-EEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHc
Confidence 468999999999999999998 4444 5555569999999999999999999886 99999999977 68999999999
Q ss_pred CCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCCeEEEE
Q 025441 152 KFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYI 231 (252)
Q Consensus 152 ~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~I~~~ 231 (252)
+++|+++.|++..+.+.||+. ..|..|++|++ |+|. .
T Consensus 78 ~~~~~~~~d~~~~~~~~~~i~-----------------------------------------~~P~~~lid~~-G~i~-~ 114 (136)
T 1lu4_A 78 NLNFTNLNDADGVIWARYNVP-----------------------------------------WQPAFVFYRAD-GTST-F 114 (136)
T ss_dssp TCCSEEEECTTSHHHHHTTCC-----------------------------------------SSSEEEEECTT-SCEE-E
T ss_pred CCCceEEECCchhHHHhcCCC-----------------------------------------CCCEEEEECCC-CcEE-E
Confidence 999999999999888877643 13568999998 6888 6
Q ss_pred EeCCCCCCCCCHHHHHHHhh
Q 025441 232 HRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 232 h~~~~~~D~~~~~eIL~al~ 251 (252)
+.+ .....+.+++.+.++
T Consensus 115 ~~~--~~g~~~~~~l~~~l~ 132 (136)
T 1lu4_A 115 VNN--PTAAMSQDELSGRVA 132 (136)
T ss_dssp ECC--SSSCCCHHHHHHHHH
T ss_pred EEc--CCCccCHHHHHHHHH
Confidence 652 334456777777654
No 88
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.80 E-value=5.3e-19 Score=139.08 Aligned_cols=121 Identities=10% Similarity=0.156 Sum_probs=103.5
Q ss_pred cccCCCCCcEE--ecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC------CH
Q 025441 70 DTKNLLDTVKV--YDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SV 141 (252)
Q Consensus 70 ~~g~~apdf~L--~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d------~~ 141 (252)
++|+.+|+|++ .|.+|+.++++++ ++ +.+|++|++.||++|+.+++.|.++++++.+. +.+++|+.+ +.
T Consensus 2 ~~g~~~P~f~~~~~~~~g~~~~~~~~-~g-k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~ 78 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWLNGEVTREQLI-GE-KPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDP 78 (148)
T ss_dssp CTTCBCCCCCCCSEEESCCCCHHHHT-TT-SCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSH
T ss_pred CCCCCCCCCccccccccCcccchhhc-CC-CEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCH
Confidence 57999999999 7899999999987 34 45666667999999999999999999998777 999999976 57
Q ss_pred HHHHHHHHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEE
Q 025441 142 EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 142 ~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 221 (252)
+.+++|.++++++|+++.|.+..+.+.||+.. .|..||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~li 117 (148)
T 2b5x_A 79 GKIKETAAEHDITQPIFVDSDHALTDAFENEY-----------------------------------------VPAYYVF 117 (148)
T ss_dssp HHHHHHHHHTTCCSCEEECSSCHHHHHTCCCC-----------------------------------------SSEEEEE
T ss_pred HHHHHHHHHcCCCcceEECCchhHHHHhCCCC-----------------------------------------CCEEEEE
Confidence 89999999999999999999888888877531 3468999
Q ss_pred eCCCCeEEEEEeCC
Q 025441 222 GPGKSNISYIHRDK 235 (252)
Q Consensus 222 d~ggg~I~~~h~~~ 235 (252)
|++ |+|.+.+.+.
T Consensus 118 d~~-G~i~~~~~g~ 130 (148)
T 2b5x_A 118 DKT-GQLRHFQAGG 130 (148)
T ss_dssp CTT-CBEEEEEESC
T ss_pred CCC-CcEEEEecCC
Confidence 998 6999988763
No 89
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.80 E-value=1.6e-19 Score=146.29 Aligned_cols=99 Identities=16% Similarity=0.185 Sum_probs=88.6
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC---------
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------- 139 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d--------- 139 (252)
.++|+.+|+|++.|.+|+.++++++ +++.+|++||+.||++|+.+++.|.++++++. ++.+|+|+.+
T Consensus 11 ~~~g~~~p~~~l~~~~g~~~~l~~~--~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~ 86 (165)
T 3ha9_A 11 EEVLEREASFSLTTIDGEVISLNNV--GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALG 86 (165)
T ss_dssp HHHHHHHHCCCEEBTTSCEECGGGC--CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHT
T ss_pred ccccCcCCCCEeecCCCCEeeHHHh--CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccc
Confidence 5789999999999999999999998 44567777779999999999999999999887 9999999986
Q ss_pred ----------CHHHHHHHHHHcCC-cceeeecCChHHHHHcCCc
Q 025441 140 ----------SVEQARTFSEQTKF-KGEVYADPNHSSYEALSFV 172 (252)
Q Consensus 140 ----------~~~~~~~f~~~~~l-~fpllsDp~~~ly~alGv~ 172 (252)
+.+.+++|.+++++ +|+++.| +..+.+.||+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~ 129 (165)
T 3ha9_A 87 LNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVR 129 (165)
T ss_dssp CCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCC
T ss_pred cccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCC
Confidence 67899999999999 9999999 88888877643
No 90
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.80 E-value=2.6e-18 Score=139.43 Aligned_cols=141 Identities=14% Similarity=0.110 Sum_probs=109.2
Q ss_pred CCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHh-hHHHHHHHHHhHHHHHh----CCCEEEEEecC----CHHHHHH
Q 025441 76 DTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDA----SGVALVLIGPG----SVEQART 146 (252)
Q Consensus 76 pdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~-C~~el~~L~~~~~~~~~----~Gv~vVaVs~d----~~~~~~~ 146 (252)
|+|++.|.+|+.++++++ +++++|++||++||+. |+.+++.|+++++++++ .++++|+|+.| +++.+++
T Consensus 7 p~f~l~~~~G~~~~l~~~--~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~ 84 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADF--RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMAR 84 (171)
T ss_dssp SCCEEEETTSCEEETTTT--TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHh--CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHH
Confidence 899999999999999998 4567888999999997 99999999999999986 58999999987 5789999
Q ss_pred HHHHcCCcceeeecCC---hHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeC
Q 025441 147 FSEQTKFKGEVYADPN---HSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 147 f~~~~~l~fpllsDp~---~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ 223 (252)
|+++++++|+++.|.. ..+.++||+..... +.. ..+. -.....+.+||||+
T Consensus 85 ~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~----~~~-------------------~~~~---~~~~~~~~~~lid~ 138 (171)
T 2rli_A 85 YVQDFHPRLLGLTGSTKQVAQASHSYRVYYNAG----PKD-------------------EDQD---YIVDHSIAIYLLNP 138 (171)
T ss_dssp HHHTTCTTCCEEECCHHHHHHHHHHSCCCCEEC----CCC-------------------SSCC---CCEECCCEEEEECT
T ss_pred HHHHcCCCeEEEeCCHHHHHHHHHHhCeEEEec----CCC-------------------CCCC---eEEeccceEEEECC
Confidence 9999999999998754 47888898764321 000 0000 00013568999999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025441 224 GKSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 224 ggg~I~~~h~~~~~~D~~~~~eIL~al 250 (252)
+ |+|++.|.+. .+.+++++.+
T Consensus 139 ~-G~i~~~~~g~-----~~~~~l~~~l 159 (171)
T 2rli_A 139 D-GLFTDYYGRS-----RSAEQISDSV 159 (171)
T ss_dssp T-SCEEEEEESS-----CCHHHHHHHH
T ss_pred C-CeEEEEECCC-----CCHHHHHHHH
Confidence 8 6999998753 3456665554
No 91
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.80 E-value=2.6e-18 Score=132.57 Aligned_cols=128 Identities=14% Similarity=0.143 Sum_probs=105.5
Q ss_pred CCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEE------ecCCHHHHHHH
Q 025441 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI------GPGSVEQARTF 147 (252)
Q Consensus 74 ~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaV------s~d~~~~~~~f 147 (252)
.+|+|++.|.+|+.++++++ +++.+|++|++.||+.|+.+++.|++++++ ...++.++.| ..++.+.+++|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~-~~~~~~~v~i~~~~~~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDY--KGKKVYLKFWASWCSICLASLPDTDEIAKE-AGDDYVVLTVVSPGHKGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGG--TTSEEEEEECCTTCHHHHHHHHHHHHHHHT-CTTTEEEEEEECTTSTTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHH-hCCCcEEEEEEcCCCCchhhHHHHHHH
Confidence 48999999999999999998 445677777899999999999999999888 4567899999 45667899999
Q ss_pred HHHcCC-cceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCC
Q 025441 148 SEQTKF-KGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 148 ~~~~~l-~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg 226 (252)
.+++++ +|+++.|++..+.+.||+.. .|..||+|++ |
T Consensus 78 ~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~-G 115 (138)
T 4evm_A 78 YKGLDYKNLPVLVDPSGKLLETYGVRS-----------------------------------------YPTQAFIDKE-G 115 (138)
T ss_dssp HTTCCCTTCCEEECTTCHHHHHTTCCS-----------------------------------------SSEEEEECTT-C
T ss_pred HhhcCCCCeeEEECcchHHHHHcCccc-----------------------------------------CCeEEEECCC-C
Confidence 999999 99999999998888887531 3568999998 6
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 227 NISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 227 ~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
+|.+.+.+. .+.+++.+.++
T Consensus 116 ~i~~~~~g~-----~~~~~l~~~l~ 135 (138)
T 4evm_A 116 KLVKTHPGF-----MEKDAILQTLK 135 (138)
T ss_dssp CEEEEEESC-----CCHHHHHHHHH
T ss_pred cEEEeecCC-----CcHHHHHHHHH
Confidence 999988752 34566665553
No 92
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.79 E-value=6.5e-19 Score=140.20 Aligned_cols=136 Identities=14% Similarity=0.180 Sum_probs=109.8
Q ss_pred ccccCCCC-CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH-HHHHH
Q 025441 69 EDTKNLLD-TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQART 146 (252)
Q Consensus 69 ~~~g~~ap-df~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~-~~~~~ 146 (252)
.++|+.+| +|++.|.+|+.++++++ .++.+|++|++.||++|+.+++.|.++++++.+.++.+++|+.+.. +.+++
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 80 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLADL--KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWEN 80 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEESTTT--TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHH
T ss_pred cccCCCCCcccEeecCCCCEeeHHHc--CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHH
Confidence 57899999 99999999999999998 4456677778999999999999999999999888999999998865 68899
Q ss_pred HHHHcCCcc-eeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCC
Q 025441 147 FSEQTKFKG-EVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 225 (252)
Q Consensus 147 f~~~~~l~f-pllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 225 (252)
|.+++++++ +++.|++..+.+.||+. ..|..||+|++
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~- 118 (152)
T 2lja_A 81 MVTKDQLKGIQLHMGTDRTFMDAYLIN-----------------------------------------GIPRFILLDRD- 118 (152)
T ss_dssp HHHHHTCCSEEEECSSCTHHHHHTTCC-----------------------------------------SSCCEEEECTT-
T ss_pred HHHhcCCCCceeecCcchhHHHHcCcC-----------------------------------------CCCEEEEECCC-
Confidence 999999996 58888888888777643 13468999988
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHh
Q 025441 226 SNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 226 g~I~~~h~~~~~~D~~~~~eIL~al 250 (252)
|+|++.+.+ ..+..+++++|+.+
T Consensus 119 G~i~~~~~g--~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 119 GKIISANMT--RPSDPKTAEKFNEL 141 (152)
T ss_dssp SCEEESSCC--CTTCHHHHHHHHHH
T ss_pred CeEEEccCC--CCCHHHHHHHHHHH
Confidence 699987543 33334455555543
No 93
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2.8e-19 Score=146.51 Aligned_cols=90 Identities=16% Similarity=0.158 Sum_probs=67.7
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec--------CCH
Q 025441 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GSV 141 (252)
Q Consensus 70 ~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~--------d~~ 141 (252)
.-+..+|+|++.|.+|+.++++++ +++++|++||++||++|+ +++.|+++++++++.|+.+|+|+. ++.
T Consensus 7 ~~~~~~~~f~l~d~~G~~~~l~~~--~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~ 83 (171)
T 3cmi_A 7 HHMSEFYKLAPVDKKGQPFPFDQL--KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSD 83 (171)
T ss_dssp ---CGGGGCCCBBTTSCBCCGGGG--TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC-------
T ss_pred cchhheeeeEEEcCCCCEecHHHc--CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCH
Confidence 346789999999999999999998 445677777899999999 999999999999999999999997 456
Q ss_pred HHHHHHH-HHcCCcceeeecCC
Q 025441 142 EQARTFS-EQTKFKGEVYADPN 162 (252)
Q Consensus 142 ~~~~~f~-~~~~l~fpllsDp~ 162 (252)
+.+++|. ++++++||+++|++
T Consensus 84 ~~~~~~~~~~~~~~~p~~~d~d 105 (171)
T 3cmi_A 84 EEIAQFCQLNYGVTFPIMKKID 105 (171)
T ss_dssp -----------CCCSCBBCCCB
T ss_pred HHHHHHHHhccCCCceEEeecc
Confidence 7889999 99999999999754
No 94
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.78 E-value=7.1e-18 Score=130.51 Aligned_cols=96 Identities=14% Similarity=0.115 Sum_probs=84.3
Q ss_pred cCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC-HHHHHHHHHH
Q 025441 72 KNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQ 150 (252)
Q Consensus 72 g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~-~~~~~~f~~~ 150 (252)
|..+|+|++.|.+|+.++++++ ++++ +|++|++.||++|+.+++.|.++++++. ++.+++|+.++ .+.+++|.++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~~~-~~k~-~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~ 77 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGESL-LGKP-AVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNK 77 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGGGG-TTSC-EEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHH
T ss_pred CCCCCCcccccCCCCEeeHHHh-CCCe-EEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHH
Confidence 6679999999999999999998 4444 5555669999999999999999998886 89999999875 6889999999
Q ss_pred cCC-cceeeecCChHHHHHcCC
Q 025441 151 TKF-KGEVYADPNHSSYEALSF 171 (252)
Q Consensus 151 ~~l-~fpllsDp~~~ly~alGv 171 (252)
+++ +|+++.|.+..+.+.||+
T Consensus 78 ~~~~~~~~~~d~~~~~~~~~~i 99 (136)
T 1zzo_A 78 YPVKTFTQLADTDGSVWANFGV 99 (136)
T ss_dssp TTCTTSEEEECTTCHHHHHTTC
T ss_pred cCCCceEEEEcCCcHHHHHcCC
Confidence 999 999999998888887764
No 95
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.78 E-value=1.8e-18 Score=146.17 Aligned_cols=138 Identities=9% Similarity=0.017 Sum_probs=102.8
Q ss_pred ccccCCC--CCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHh-hHHHHHHHHHhHHHHHhC---CCEEEEEecC---
Q 025441 69 EDTKNLL--DTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDAS---GVALVLIGPG--- 139 (252)
Q Consensus 69 ~~~g~~a--pdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~-C~~el~~L~~~~~~~~~~---Gv~vVaVs~d--- 139 (252)
..+|+.+ |+|+|.|.+|+.++++++ +++++|++||++||+. |+.+++.|+++++++.+. +++||+|+.|
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~~v~l~~~--~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~ 90 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGNEFTEKNL--LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPAR 90 (200)
T ss_dssp ---CCCCCCCCCEEEETTSCEEEGGGG--TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTT
T ss_pred hccCCCCcCCCEEEEcCCCCEEeHHHc--CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCC
Confidence 4667775 999999999999999998 4567888889999996 999999999999999864 8999999988
Q ss_pred -CHHHHHHHHHHcCCcceeeec---CChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCcccc
Q 025441 140 -SVEQARTFSEQTKFKGEVYAD---PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 215 (252)
Q Consensus 140 -~~~~~~~f~~~~~l~fpllsD---p~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~ 215 (252)
+++.+++|+++++.+|+.+.+ ....+.++||+..... ... ..|. .+. ....
T Consensus 91 d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p-----~~~-------~~~~------~~~-------~~~~ 145 (200)
T 2b7k_A 91 DSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTP-----PNV-------KPGQ------DYL-------VDHS 145 (200)
T ss_dssp CCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------------------------C-------TTTC
T ss_pred CCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEeec-----ccc-------CCCC------Cce-------eeec
Confidence 578999999999999988764 4578889999864321 000 0000 000 0124
Q ss_pred ceEEEEeCCCCeEEEEEeC
Q 025441 216 GGIIVAGPGKSNISYIHRD 234 (252)
Q Consensus 216 gg~fVid~ggg~I~~~h~~ 234 (252)
+.+||||++ |+|++.+.+
T Consensus 146 ~~~~liD~~-G~i~~~~~g 163 (200)
T 2b7k_A 146 IFFYLMDPE-GQFVDALGR 163 (200)
T ss_dssp CCEEEECTT-SCEEEEECT
T ss_pred ceEEEECCC-CcEEEEeCC
Confidence 589999999 699998865
No 96
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.77 E-value=3.7e-18 Score=157.61 Aligned_cols=123 Identities=11% Similarity=0.104 Sum_probs=108.3
Q ss_pred CccccCCCCCcE-----EecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC---
Q 025441 68 SEDTKNLLDTVK-----VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--- 139 (252)
Q Consensus 68 ~~~~g~~apdf~-----L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d--- 139 (252)
...+|+.+|+|+ +.|.+|+.++++++ +++++|++||+.||++|+.+++.|+++++++.+.|+.||+|+.+
T Consensus 50 ~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl--~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~ 127 (352)
T 2hyx_A 50 QLESCGTAPDLKGITGWLNTPGNKPIDLKSL--RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYA 127 (352)
T ss_dssp SCCCCCBCCCCCSCCEEESSGGGCCCCGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSG
T ss_pred ccCCCCcCCCccccccccCCCCCCEEcHHHh--CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCccc
Confidence 468899999999 99999999999998 45667778889999999999999999999999999999999874
Q ss_pred ---CHHHHHHHHHHcCCcceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccc
Q 025441 140 ---SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 140 ---~~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 216 (252)
+.+.+++|+++++++|+++.|.+..+.+.|++. ..|
T Consensus 128 ~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~-----------------------------------------~~P 166 (352)
T 2hyx_A 128 FEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNR-----------------------------------------YWP 166 (352)
T ss_dssp GGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCC-----------------------------------------EES
T ss_pred ccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCC-----------------------------------------ccC
Confidence 578999999999999999999998888877642 135
Q ss_pred eEEEEeCCCCeEEEEEeC
Q 025441 217 GIIVAGPGKSNISYIHRD 234 (252)
Q Consensus 217 g~fVid~ggg~I~~~h~~ 234 (252)
..||||++ |+|++.+.+
T Consensus 167 t~~lID~~-G~Iv~~~~G 183 (352)
T 2hyx_A 167 AEYLIDAT-GTVRHIKFG 183 (352)
T ss_dssp EEEEECTT-SBEEEEEES
T ss_pred EEEEEeCC-CeEEEEEcC
Confidence 78999998 699999876
No 97
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.77 E-value=1.6e-17 Score=134.82 Aligned_cols=121 Identities=14% Similarity=0.103 Sum_probs=100.0
Q ss_pred CCccccCCCCCcEEecC--CCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC-CHHH
Q 025441 67 VSEDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQ 143 (252)
Q Consensus 67 ~~~~~g~~apdf~L~d~--~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d-~~~~ 143 (252)
....+|+.+|+|++.|. +|+.+++.++.+++ .+|++|++.|||+|+.+++.|++++++ |+.+++|+.+ +.+.
T Consensus 20 ~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk-~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~ 94 (168)
T 2b1k_A 20 ESALIGKPVPKFRLESLDNPGQFYQADVLTQGK-PVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQK 94 (168)
T ss_dssp CCTTTTSBCCCCEEEESSSTTCEEEGGGGCCSS-CEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHH
T ss_pred cccccCCcCCCeEeecccCCCcEeehhHhcCCC-EEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHH
Confidence 34689999999999999 99999998875554 555666799999999999999887654 8999999964 5578
Q ss_pred HHHHHHHcCCcce-eeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEe
Q 025441 144 ARTFSEQTKFKGE-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 222 (252)
Q Consensus 144 ~~~f~~~~~l~fp-llsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid 222 (252)
+++|.++++++|+ ++.|++..+.+.||+. ..|.+||+|
T Consensus 95 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid 133 (168)
T 2b1k_A 95 AISWLKELGNPYALSLFDGDGMLGLDLGVY-----------------------------------------GAPETFLID 133 (168)
T ss_dssp HHHHHHHHCCCCSEEEEETTCHHHHHHTCC-----------------------------------------SSSEEEEEC
T ss_pred HHHHHHHcCCCCceeeECcchHHHHHcCcc-----------------------------------------ccCEEEEEC
Confidence 9999999999999 6889888877776643 135699999
Q ss_pred CCCCeEEEEEeC
Q 025441 223 PGKSNISYIHRD 234 (252)
Q Consensus 223 ~ggg~I~~~h~~ 234 (252)
++ |+|++.+.+
T Consensus 134 ~~-G~i~~~~~g 144 (168)
T 2b1k_A 134 GN-GIIRYRHAG 144 (168)
T ss_dssp TT-SBEEEEEES
T ss_pred CC-CeEEEEEeC
Confidence 98 699998875
No 98
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.75 E-value=1.8e-17 Score=132.09 Aligned_cols=121 Identities=18% Similarity=0.108 Sum_probs=96.9
Q ss_pred CCccccCCCCCcEEecCCC--------CeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec
Q 025441 67 VSEDTKNLLDTVKVYDVNG--------NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 67 ~~~~~g~~apdf~L~d~~G--------~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~ 138 (252)
+...+|+.+|+|++.|.+| +.++++++ . ++.+|++|++.||++|+.+++.|++++++ .++.+++|+.
T Consensus 6 ~~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~-~-gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~ 80 (156)
T 1kng_A 6 PSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAF-K-GKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGINY 80 (156)
T ss_dssp ------CBCCCCCBCCCTTCEETTEECCCBCGGGG-T-TSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEEE
T ss_pred hhHHhCCCCCCceeeeccCcccccccCceechHHh-C-CCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEEC
Confidence 3468899999999999999 99999998 3 44566677899999999999999987765 4599999997
Q ss_pred C-CHHHHHHHHHHcCCcce-eeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccc
Q 025441 139 G-SVEQARTFSEQTKFKGE-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 139 d-~~~~~~~f~~~~~l~fp-llsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 216 (252)
+ +.+.+++|.++++++|+ ++.|++..+.+.||+. ..|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P 119 (156)
T 1kng_A 81 KDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVY-----------------------------------------GVP 119 (156)
T ss_dssp SCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCC-----------------------------------------SSC
T ss_pred CCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcC-----------------------------------------ccC
Confidence 5 56789999999999999 8999888888777643 135
Q ss_pred eEEEEeCCCCeEEEEEeC
Q 025441 217 GIIVAGPGKSNISYIHRD 234 (252)
Q Consensus 217 g~fVid~ggg~I~~~h~~ 234 (252)
.+||+|++ |+|++.+.+
T Consensus 120 ~~~~id~~-G~i~~~~~g 136 (156)
T 1kng_A 120 ETFVVGRE-GTIVYKLVG 136 (156)
T ss_dssp EEEEECTT-SBEEEEEES
T ss_pred eEEEEcCC-CCEEEEEeC
Confidence 68999998 699998875
No 99
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.74 E-value=8.3e-18 Score=135.34 Aligned_cols=132 Identities=9% Similarity=0.062 Sum_probs=105.4
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC------CHH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SVE 142 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d------~~~ 142 (252)
...++.+| ++.|.+|+.++++++ +++.+|++||+.||++|+.+++.|++++++++..|+.+|+|+.+ +.+
T Consensus 14 ~~~~~~~p--~l~~~~g~~~~~~~~--~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~ 89 (164)
T 2h30_A 14 ATVPHTMS--TMKTADNRPASVYLK--KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDG 89 (164)
T ss_dssp CCHHHHHT--TCEETTSSBGGGGCC--TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTT
T ss_pred cccCCcCC--ccCCCCCCEeeHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHH
Confidence 35566667 788999999999987 34556677789999999999999999999999999999999964 456
Q ss_pred HHHHHHHHcCCc-ceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEE
Q 025441 143 QARTFSEQTKFK-GEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 143 ~~~~f~~~~~l~-fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 221 (252)
.+++|.++++++ ++++.|.+..+.+.||+.. .|..||+
T Consensus 90 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~li 128 (164)
T 2h30_A 90 EFQKWYAGLNYPKLPVVTDNGGTIAQNLNISV-----------------------------------------YPSWALI 128 (164)
T ss_dssp HHHHHHTTSCCTTSCEEECTTCHHHHHTTCCS-----------------------------------------SSEEEEE
T ss_pred HHHHHHHhCCCCcceEEEcCchHHHHHcCCCc-----------------------------------------cceEEEE
Confidence 788898888998 8999999988888877531 3468999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 222 GPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 222 d~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
|++ |+|++.+.+. .+.+++.+.++
T Consensus 129 d~~-G~i~~~~~g~-----~~~~~l~~~i~ 152 (164)
T 2h30_A 129 GKD-GDVQRIVKGS-----INEAQALALIR 152 (164)
T ss_dssp CTT-SCEEEEEESC-----CCHHHHHHHHH
T ss_pred CCC-CcEEEEEcCC-----CCHHHHHHHHH
Confidence 998 6999988752 24555555443
No 100
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.74 E-value=7.8e-18 Score=133.39 Aligned_cols=120 Identities=13% Similarity=0.074 Sum_probs=97.6
Q ss_pred ccCCCCC-cEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh-CCCEEEEEecC-CHHHHHHH
Q 025441 71 TKNLLDT-VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPG-SVEQARTF 147 (252)
Q Consensus 71 ~g~~apd-f~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~-~Gv~vVaVs~d-~~~~~~~f 147 (252)
.++.+|+ |++.|.+|+.++++++ +++.+|++|++.||++|+.+++.|+++++++.+ .++.+|+|+.+ +.+.+++|
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSL--AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDY 80 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHH
Confidence 5789999 9999999999999998 445677888899999999999999999999985 78999999998 46789999
Q ss_pred HHHcCC-cceeee-cCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEe-CC
Q 025441 148 SEQTKF-KGEVYA-DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG-PG 224 (252)
Q Consensus 148 ~~~~~l-~fplls-Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid-~g 224 (252)
.+++++ .++++. |.+..+.+.||+. ..|..||+| ++
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~~ 119 (144)
T 1i5g_A 81 YAKMPWLALPFEDRKGMEFLTTGFDVK-----------------------------------------SIPTLVGVEADS 119 (144)
T ss_dssp HTTCSSEECCTTCHHHHHHHHHHTTCC-----------------------------------------SSSEEEEEETTT
T ss_pred HHhCCccccccCchHHHHHHHHHcCCC-----------------------------------------CCCEEEEEECCC
Confidence 999875 566554 5556666666532 145789999 77
Q ss_pred CCeEEEEEeC
Q 025441 225 KSNISYIHRD 234 (252)
Q Consensus 225 gg~I~~~h~~ 234 (252)
|+|++.+..
T Consensus 120 -G~i~~~~~~ 128 (144)
T 1i5g_A 120 -GNIITTQAR 128 (144)
T ss_dssp -CCEEESCHH
T ss_pred -CcEEeccch
Confidence 699887654
No 101
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.73 E-value=6e-17 Score=133.87 Aligned_cols=149 Identities=11% Similarity=0.108 Sum_probs=103.3
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCH-hhHHHHHHHHHhHHHHHhCC--CEEEEEec----CCHH
Q 025441 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDASG--VALVLIGP----GSVE 142 (252)
Q Consensus 70 ~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp-~C~~el~~L~~~~~~~~~~G--v~vVaVs~----d~~~ 142 (252)
.+|.++|+|+|.|.+|+.++++++ ++++||++||++||| .|..++++|.++++.+++.| +++|+||. |+++
T Consensus 7 P~~~~~PdF~L~d~~G~~v~l~d~--~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~ 84 (170)
T 4hde_A 7 PLNWDLETFQFTNQDGKPFGTKDL--KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPE 84 (170)
T ss_dssp CCCBCCCCCEEECTTSCEEEHHHH--TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHH
T ss_pred CCCCcCCCcEEECCCCCEEeHHHh--CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHH
Confidence 368899999999999999999998 567888899999998 79999999999999887665 78889986 4678
Q ss_pred HHHHHHHHcCCcce---eeecCChH-HHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceE
Q 025441 143 QARTFSEQTKFKGE---VYADPNHS-SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 218 (252)
Q Consensus 143 ~~~~f~~~~~l~fp---llsDp~~~-ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~ 218 (252)
.+++|+++++..++ ++++++.+ +.+.++ ..+... ...+..+...-.+.+
T Consensus 85 ~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~----------------------~~~~~~-----~~~~~~~~~~H~~~~ 137 (170)
T 4hde_A 85 NLKAFIQKFTEDTSNWNLLTGYSLEDITKFSK----------------------DNFQSL-----VDKPENGQVIHGTSF 137 (170)
T ss_dssp HHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHH----------------------HHHCCC-----CBCCTTSCCBCCCEE
T ss_pred HHHHHHHHcCCCCCCceecCcccHHHHHHHHH----------------------hccccc-----ccCCCCceEEeeeEE
Confidence 99999999887654 45554332 111110 011100 000000011123578
Q ss_pred EEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 219 IVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 219 fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
||||++ |+|+..|.+.. ..+.++|++.++
T Consensus 138 ~liD~~-G~i~~~~~g~~---~~~~~~l~~~ik 166 (170)
T 4hde_A 138 YLIDQN-GKVMKKYSGIS---NTPYEDIIRDMK 166 (170)
T ss_dssp EEECTT-SCEEEEEESSS---SCCHHHHHHHHH
T ss_pred EEEcCC-CeEEEEECCCC---CCCHHHHHHHHH
Confidence 999999 69998887532 345677776554
No 102
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.72 E-value=1.1e-17 Score=132.92 Aligned_cols=126 Identities=10% Similarity=0.062 Sum_probs=99.6
Q ss_pred cccCCCCC-cEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh-CCCEEEEEecCC-HHHHHH
Q 025441 70 DTKNLLDT-VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGS-VEQART 146 (252)
Q Consensus 70 ~~g~~apd-f~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~-~Gv~vVaVs~d~-~~~~~~ 146 (252)
..++.+|+ |++.|.+| .++++++ +++.+|++|+++||++|+.+++.|+++++++.+ .++.+++|+.+. .+.+++
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~ 79 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSL--AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAG 79 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGG--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHh--CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHH
Confidence 46889999 99999999 9999998 455677788899999999999999999999984 789999999985 578899
Q ss_pred HHHHcCC-cceeee-cCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEe-C
Q 025441 147 FSEQTKF-KGEVYA-DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG-P 223 (252)
Q Consensus 147 f~~~~~l-~fplls-Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid-~ 223 (252)
|.+++++ .++++. |.+..+.+.||+. ..|..||+| +
T Consensus 80 ~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~Pt~~lid~~ 118 (146)
T 1o8x_A 80 YFAKMPWLAVPFAQSEAVQKLSKHFNVE-----------------------------------------SIPTLIGVDAD 118 (146)
T ss_dssp HHTTCSSEECCGGGHHHHHHHHHHTTCC-----------------------------------------SSSEEEEEETT
T ss_pred HHHHCCceeeccchhhHHHHHHHHhCCC-----------------------------------------CCCEEEEEECC
Confidence 9998874 466554 5556666666542 145789999 7
Q ss_pred CCCeEEEEEeCCCCCCC
Q 025441 224 GKSNISYIHRDKEAGDD 240 (252)
Q Consensus 224 ggg~I~~~h~~~~~~D~ 240 (252)
+ |+|++.+......+.
T Consensus 119 ~-G~i~~~~~~~~~~~~ 134 (146)
T 1o8x_A 119 S-GDVVTTRARATLVKD 134 (146)
T ss_dssp T-CCEEESCHHHHHTTC
T ss_pred C-CeEEEecchhHHhhC
Confidence 7 699987765444333
No 103
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.49 E-value=4.3e-18 Score=133.85 Aligned_cols=124 Identities=9% Similarity=0.156 Sum_probs=95.6
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh--CCCEEEEEecCCH-HHHHHHHH
Q 025441 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSV-EQARTFSE 149 (252)
Q Consensus 73 ~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~--~Gv~vVaVs~d~~-~~~~~f~~ 149 (252)
+.+|+|+|.|.+|+.+++++++++++.+|++|+++|||+|+.+++.|+++++++++ .++.+++|+.+.. +.+++|++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~ 81 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMM 81 (143)
Confidence 46899999999999999999334443788888999999999999999999999853 5899999998854 68899999
Q ss_pred HcCCccee---eecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCC
Q 025441 150 QTKFKGEV---YADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 150 ~~~l~fpl---lsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg 226 (252)
+++++++. ..|.+..+.++||+. ..|..||+|++ |
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~-G 119 (143)
T 2lus_A 82 ESHGDWLAIPYRSGPASNVTAKYGIT-----------------------------------------GIPALVIVKKD-G 119 (143)
Confidence 99888763 344444555554431 14568899987 5
Q ss_pred eEEEEEeCCCCC
Q 025441 227 NISYIHRDKEAG 238 (252)
Q Consensus 227 ~I~~~h~~~~~~ 238 (252)
+|++.+-..+..
T Consensus 120 ~i~~~~~~~~~~ 131 (143)
T 2lus_A 120 TLISMNGRGEVQ 131 (143)
Confidence 898886554443
No 104
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.67 E-value=1.5e-16 Score=125.49 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=78.8
Q ss_pred cccCCCCCc-EEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHH-hCCCEEEEEecCC-HHHHHH
Q 025441 70 DTKNLLDTV-KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMD-ASGVALVLIGPGS-VEQART 146 (252)
Q Consensus 70 ~~g~~apdf-~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~-~~Gv~vVaVs~d~-~~~~~~ 146 (252)
..|+.+|+| ++.|.+| .++++++ +++.+|++|++.||++|+.+++.|+++++++. +.++.+++|+.+. .+..++
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~ 79 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSL--VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHD 79 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGG--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHH
T ss_pred chhhhCccceEeecCCC-cCcHHHh--CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHH
Confidence 578999997 9999999 9999998 44567777789999999999999999999997 4789999999986 468889
Q ss_pred HHHHcCC-cceeee-cCChHHHHHcC
Q 025441 147 FSEQTKF-KGEVYA-DPNHSSYEALS 170 (252)
Q Consensus 147 f~~~~~l-~fplls-Dp~~~ly~alG 170 (252)
|.+++++ .+++.. |.+..+.+.||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (144)
T 1o73_A 80 YYGKMPWLALPFDQRSTVSELGKTFG 105 (144)
T ss_dssp HHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred HHHhCCceEeeccchhHHHHHHHHcC
Confidence 9888764 345443 44455555554
No 105
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.65 E-value=1.1e-16 Score=131.23 Aligned_cols=98 Identities=11% Similarity=0.100 Sum_probs=79.6
Q ss_pred cccCCCCCc-EEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh-CCCEEEEEecCCH-HHHHH
Q 025441 70 DTKNLLDTV-KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSV-EQART 146 (252)
Q Consensus 70 ~~g~~apdf-~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~-~Gv~vVaVs~d~~-~~~~~ 146 (252)
.+|+.+|+| ++.|.+| .++++++ +++++|++||++||++|+.+++.|.++++++.+ .++.||+|+.|.. +.+++
T Consensus 23 ~vG~~~P~f~~l~~~~g-~v~l~~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~ 99 (165)
T 3s9f_A 23 GVAKHLGEALKLRKQAD-TADMDSL--SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNA 99 (165)
T ss_dssp HHHHHHHHTSCEEETTE-EECSGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHH
T ss_pred hhcccCCcceeeecCCC-cccHHHc--CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHH
Confidence 789999999 9999999 9999998 456778888899999999999999999999986 7999999998865 68889
Q ss_pred HHHHcCC-cceeeecCC-hHHHHHcC
Q 025441 147 FSEQTKF-KGEVYADPN-HSSYEALS 170 (252)
Q Consensus 147 f~~~~~l-~fpllsDp~-~~ly~alG 170 (252)
|.+++++ .++++.|.. ..+.+.||
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~l~~~~~ 125 (165)
T 3s9f_A 100 YYAKMPWLSIPFANRNIVEALTKKYS 125 (165)
T ss_dssp HHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred HHHhCCCcccccCchhHHHHHHHHcC
Confidence 9988764 344443322 44444444
No 106
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.41 E-value=4.5e-12 Score=108.07 Aligned_cols=148 Identities=13% Similarity=0.175 Sum_probs=112.9
Q ss_pred ccccCCCCC--cEE--e-----cCC----C--CeEeCCCcc-CCCeEEEEEEcCCCCHhhHH-HHHHHHHhHHHH-HhCC
Q 025441 69 EDTKNLLDT--VKV--Y-----DVN----G--NAIPISDLW-KDRKAVVAFARHFGCVLCRK-RADYLAAKKDVM-DASG 130 (252)
Q Consensus 69 ~~~g~~apd--f~L--~-----d~~----G--~~v~ls~l~-~~~~vVLvF~R~~~Cp~C~~-el~~L~~~~~~~-~~~G 130 (252)
..+|+++|. +++ . +.+ | +++++++++ +++++||+++++++.|.|.. +++.+.+.++++ +++|
T Consensus 26 ~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kG 105 (199)
T 4h86_A 26 DLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKE 105 (199)
T ss_dssp TTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSC
T ss_pred HHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcC
Confidence 468889995 331 1 111 3 467787876 57889999999999999986 799999998875 7889
Q ss_pred C-EEEEEecCCHHHHHHHHHHcCC----cceeeecCChHHHHHcCCccccccccCchhhHHHHHHHhhhchhhccccccc
Q 025441 131 V-ALVLIGPGSVEQARTFSEQTKF----KGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFER 205 (252)
Q Consensus 131 v-~vVaVs~d~~~~~~~f~~~~~l----~fpllsDp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g 205 (252)
+ +|++|+.+++...++|.+.++. .+++++|++.++.++||+..... + .+.|
T Consensus 106 vd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~~~--~-------------gg~R--------- 161 (199)
T 4h86_A 106 VDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVG--D-------------GVYW--------- 161 (199)
T ss_dssp CCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEEEE--T-------------TEEE---------
T ss_pred CcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCceeecC--C-------------Ccce---------
Confidence 8 6999999999999999998776 47899999999999999864321 0 0111
Q ss_pred cccCCCccccceEEEEeCCCCeEEEEEeCCCCCCC---CCHHHHHHHh
Q 025441 206 DTVSRGGWQQGGIIVAGPGKSNISYIHRDKEAGDD---PDIQDILKAC 250 (252)
Q Consensus 206 ~~~~g~~~q~gg~fVid~ggg~I~~~h~~~~~~D~---~~~~eIL~al 250 (252)
-.+-++||| | |+|.|.+++.++++. -..+.||+.|
T Consensus 162 --------S~Rya~IVd-D-GvV~~~~vE~~pg~~~~vS~ae~vL~~L 199 (199)
T 4h86_A 162 --------SGRWAMVVE-N-GIVTYAAKETNPGTDVTVSSVESVLAHL 199 (199)
T ss_dssp --------ECSEEEEEE-T-TEEEEEEECSSTTTCCSTTSHHHHHTTC
T ss_pred --------eeEEEEEEE-C-CEEEEEEEeCCCCCCCcccCHHHHHhcC
Confidence 234688998 6 599999999887754 4578888754
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.04 E-value=7.8e-10 Score=85.23 Aligned_cols=64 Identities=8% Similarity=0.053 Sum_probs=46.5
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 73 ~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
+.+++++..+.+|...... . ..++.+|++|++.||++|+...+.|.++.+++. .++.++.|..+
T Consensus 4 ~~~~~l~~~~~~~~~~~~~-~-~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~ 67 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEE-A-KEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE 67 (126)
T ss_dssp CCSSCTTTTCCSEESSTTT-C-CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT
T ss_pred cccCCCCccccchhHHHHH-H-hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC
Confidence 3455666556665443322 2 345567777789999999999999999888876 67999999954
No 108
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.94 E-value=5.2e-10 Score=90.22 Aligned_cols=67 Identities=13% Similarity=0.094 Sum_probs=44.7
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEc-CCCCHhhHHHHHHH---HHhHHHHHhCCCEEEEEecCCH
Q 025441 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFAR-HFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 69 ~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R-~~~Cp~C~~el~~L---~~~~~~~~~~Gv~vVaVs~d~~ 141 (252)
...+...+++ +..|+.+.+++. ++++ +|+.|+ +.||++|+.+++.| .++.+.+ ..++.++.|..+..
T Consensus 24 ~~~~~~~~~~---~~~~~~~~~a~~-~gk~-vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~-~~~~~~v~vd~~~~ 94 (154)
T 2ju5_A 24 RPIAAANLQW---ESYAEALEHSKQ-DHKP-IGLFFTGSDWCMWCIKMQDQILQSSEFKHFA-GVHLHMVEVDFPQK 94 (154)
T ss_dssp CSSCCCCCCE---ECHHHHHHHHHH-HCCC-EEEEEECTTTCHHHHHHHHHTTTSHHHHHHH-HHHCEEEEEECCSS
T ss_pred hhcccCCCCC---CCHHHHHHHHHh-CCCe-EEEEEeCCCCCHhHHHHHHHHhcCHHHHHHh-cCcEEEEEecCccc
Confidence 4455556666 345677777765 3444 555556 99999999999999 4544433 34678888877653
No 109
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.81 E-value=4.9e-08 Score=75.54 Aligned_cols=65 Identities=9% Similarity=0.131 Sum_probs=43.9
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 70 ~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
.....+|+++ +.+++.++.... +++.+|+.|++.||++|+.+.+.|.++.+++.. ++.++.|..+
T Consensus 19 ~~~~~~~~~~--~~~~~~~~~~~~--~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d 83 (128)
T 3ul3_B 19 RMFKKVPRLQ--QNGSNIINGVNM--KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLD 83 (128)
T ss_dssp -------CCC--CCCCSSSSBTTS--CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGG
T ss_pred HHhccCCccc--cCCccHHHHHHc--cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECC
Confidence 4456677776 345555555443 566788888999999999999999999888763 5788888754
No 110
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.76 E-value=3.6e-08 Score=76.47 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=65.9
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHH--HhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcceeeecCChHHHHHcCCcc
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLA--AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~--~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~ 173 (252)
.++.+|++|++.||++|+...+.|. ++..++.. ++.++.|..++ .|.+..+.+.||+..
T Consensus 28 ~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~------------------~~~~~~l~~~~~v~~ 88 (133)
T 3fk8_A 28 THKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN------------------FDRNLELSQAYGDPI 88 (133)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT------------------TTSSHHHHHHTTCGG
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc------------------ccchHHHHHHhCCcc
Confidence 3566777889999999999999999 77777754 68999998864 355555666665421
Q ss_pred ccccccCchhhHHHHHHHhhhchhhccccccccccCCCccccceEEEEeCCCCeEEEEEeCCCCCC--CCCHHHHHHHh
Q 025441 174 GVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYIHRDKEAGD--DPDIQDILKAC 250 (252)
Q Consensus 174 ~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~I~~~h~~~~~~D--~~~~~eIL~al 250 (252)
. ...|..+++|++ |++.+.+.+....+ ..+.+++.+.+
T Consensus 89 ~--------------------------------------~~~Pt~~~~d~~-G~~~~~~~g~~~~~~~~~~~~~l~~~l 128 (133)
T 3fk8_A 89 Q--------------------------------------DGIPAVVVVNSD-GKVRYTTKGGELANARKMSDQGIYDFF 128 (133)
T ss_dssp G--------------------------------------GCSSEEEEECTT-SCEEEECCSCTTTTGGGSCHHHHHHHH
T ss_pred C--------------------------------------CccceEEEECCC-CCEEEEecCCcccccccCCHHHHHHHH
Confidence 1 124678999888 69998887633221 23444444433
No 111
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.74 E-value=2.2e-09 Score=84.20 Aligned_cols=92 Identities=11% Similarity=0.111 Sum_probs=63.2
Q ss_pred cccCCCCCcE-EecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHH---HHhHHHHHhCCCEEEEEecCCH-HHH
Q 025441 70 DTKNLLDTVK-VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV-EQA 144 (252)
Q Consensus 70 ~~g~~apdf~-L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~Gv~vVaVs~d~~-~~~ 144 (252)
..+..+|+|+ +.+.++....++++ +++.+|++|++.||++|+...+.+ .++.+++. ++.++.|..+.. +..
T Consensus 5 ~~~~~~~~f~~~~~~~~~~~~l~~~--~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~~~~ 80 (134)
T 2fwh_A 5 AQTQTHLNFTQIKTVDELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTANDAQD 80 (134)
T ss_dssp -----CCCCEECCSHHHHHHHHHHH--TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCCHHH
T ss_pred cccccCCCcEEecCHHHHHHHHHHh--cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCcchH
Confidence 5678899998 66666666667665 245566677899999999998887 67766664 599999998654 455
Q ss_pred HHHHHHcCC---cceeeecCChHH
Q 025441 145 RTFSEQTKF---KGEVYADPNHSS 165 (252)
Q Consensus 145 ~~f~~~~~l---~fpllsDp~~~l 165 (252)
.++++++++ |.-++.|++.++
T Consensus 81 ~~l~~~~~v~~~Pt~~~~d~~G~~ 104 (134)
T 2fwh_A 81 VALLKHLNVLGLPTILFFDGQGQE 104 (134)
T ss_dssp HHHHHHTTCCSSSEEEEECTTSCB
T ss_pred HHHHHHcCCCCCCEEEEECCCCCE
Confidence 667777665 334778887665
No 112
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.62 E-value=2.4e-08 Score=78.13 Aligned_cols=81 Identities=10% Similarity=0.056 Sum_probs=60.3
Q ss_pred EEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcC---Ccc
Q 025441 79 KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKG 155 (252)
Q Consensus 79 ~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~---l~f 155 (252)
.+.+.+|..+.++++ +++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+.... ++++++ +|.
T Consensus 35 ~l~~~~~~~~~l~~~--~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~---~~~~~~v~~~Pt 108 (141)
T 3hxs_A 35 KIADYENHSKEWKYL--GDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPE---LARDFGIQSIPT 108 (141)
T ss_dssp HTCCCSSCCCCCCCC--CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHH---HHHHTTCCSSSE
T ss_pred HhhccccchhHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHH---HHHHcCCCCcCE
Confidence 356778888888877 455677777899999999999999999888764 58999999886543 334444 454
Q ss_pred eeeecCChHH
Q 025441 156 EVYADPNHSS 165 (252)
Q Consensus 156 pllsDp~~~l 165 (252)
-++.|++..+
T Consensus 109 ~~~~~~~g~~ 118 (141)
T 3hxs_A 109 IWFVPMKGEP 118 (141)
T ss_dssp EEEECSSSCC
T ss_pred EEEEeCCCCE
Confidence 4777777654
No 113
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.59 E-value=3.4e-07 Score=68.51 Aligned_cols=41 Identities=15% Similarity=-0.014 Sum_probs=34.3
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
++.+|+.|++.||++|+...+.|.++.+++. ++.++.|..+
T Consensus 24 ~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~ 64 (111)
T 2pu9_C 24 DKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCN 64 (111)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS
T ss_pred CCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecC
Confidence 4567777789999999999999999888764 5888888876
No 114
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.52 E-value=4.7e-07 Score=66.66 Aligned_cols=45 Identities=16% Similarity=0.117 Sum_probs=35.5
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
+.++.+|++|++.||++|+...+.|.++.+++.+ .+.++.|..+.
T Consensus 15 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~ 59 (105)
T 1nsw_A 15 QGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDE 59 (105)
T ss_dssp SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTT
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcC
Confidence 4455677777899999999999999988877654 38888887653
No 115
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.51 E-value=6.2e-07 Score=68.37 Aligned_cols=41 Identities=17% Similarity=0.079 Sum_probs=33.3
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
++.+|++|++.||++|+...+.|.++.+++. ++.++.|..+
T Consensus 37 ~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~ 77 (124)
T 1faa_A 37 DKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCN 77 (124)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecC
Confidence 4456666679999999999999999887764 6888888776
No 116
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.50 E-value=6.8e-07 Score=68.59 Aligned_cols=43 Identities=9% Similarity=0.083 Sum_probs=29.2
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHH---HHhHHHHHhCCCEEEEEecCC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
++.+|++|++.||++|+...+.+ .++.+.+ +.++.++.|..+.
T Consensus 27 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~~~vd~~~ 72 (130)
T 2kuc_A 27 DKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYF-NRHFVNLKMDMEK 72 (130)
T ss_dssp SSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHH-HHHSEEEEECSSS
T ss_pred CCeEEEEEECCCCccHHHHHHHhcCcHHHHHHH-hcCeEEEEEecCC
Confidence 45677777899999999999988 3333333 2345666666553
No 117
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.46 E-value=2.5e-06 Score=63.57 Aligned_cols=44 Identities=20% Similarity=0.187 Sum_probs=35.6
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
.++.+|++|++.||++|+...+.|.++.+++.. .+.++.|..+.
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~ 65 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDE 65 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCC
Confidence 455677777899999999999999998887754 48888888654
No 118
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.46 E-value=1.5e-06 Score=65.37 Aligned_cols=44 Identities=18% Similarity=0.067 Sum_probs=36.2
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
.++.+|++|++.||++|+...+.|.++.+++.+ ++.++.|..+.
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~ 59 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE 59 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC
Confidence 445677777899999999999999998888764 68999888753
No 119
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.46 E-value=1.4e-06 Score=67.17 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=34.5
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
.++.+|++|++.||++|+...+.|.++.+++. ++.++.|..+
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d 78 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTD 78 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETT
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECc
Confidence 35677888889999999999999999887764 6788887764
No 120
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.42 E-value=1.5e-06 Score=64.58 Aligned_cols=43 Identities=14% Similarity=0.160 Sum_probs=35.4
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
++.+|++|++.||++|+...+.|.++..++.+ ++.++.|..+.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~ 66 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA 66 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc
Confidence 45677777899999999999999998887754 78888888753
No 121
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.42 E-value=7.6e-08 Score=76.19 Aligned_cols=71 Identities=17% Similarity=0.112 Sum_probs=54.1
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHH
Q 025441 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 70 ~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~ 143 (252)
..+..+++..+.+.+++.+.- ....++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+....
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~~--~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~ 100 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLDK--LLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEPA 100 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHHH--HTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHH
T ss_pred hcCCccccCCceecCHHHHHH--HHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCHH
Confidence 346677788888877765543 224566777778899999999999999999888754 48999998886543
No 122
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.40 E-value=3.9e-06 Score=61.86 Aligned_cols=44 Identities=14% Similarity=0.050 Sum_probs=35.1
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
.++.+|++|++.||++|+...+.|.++.+++.. .+.++.|..+.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~ 61 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDE 61 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCC
Confidence 355677777899999999999999998887654 48888887653
No 123
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.38 E-value=3.1e-08 Score=75.97 Aligned_cols=77 Identities=9% Similarity=0.132 Sum_probs=53.7
Q ss_pred EecCCCCeEeCCC-ccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcC---Ccc
Q 025441 80 VYDVNGNAIPISD-LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKG 155 (252)
Q Consensus 80 L~d~~G~~v~ls~-l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~---l~f 155 (252)
+.+.+|....+.+ +.+.++.+|++|++.||++|+...+.|.++.+++ .++.++.|..+.... +.++++ +|.
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~~~---~~~~~~i~~~Pt 79 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKNGN---AADAYGVSSIPA 79 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTCHH---HHHHTTCCSSSE
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCCHH---HHHhcCCCCCCE
Confidence 3445566666653 3334567777888999999999999999988877 689999999886533 333444 444
Q ss_pred eeeecC
Q 025441 156 EVYADP 161 (252)
Q Consensus 156 pllsDp 161 (252)
-++.|.
T Consensus 80 ~~~~~~ 85 (118)
T 2f51_A 80 LFFVKK 85 (118)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 455554
No 124
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.37 E-value=6.7e-07 Score=68.63 Aligned_cols=68 Identities=7% Similarity=-0.038 Sum_probs=48.1
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcceeeecCChH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHS 164 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpllsDp~~~ 164 (252)
.++.+|++|++.||++|+...+.|.++.+++.. .+.++.|..+....+.+-..-.++|.-++.|.+..
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTT
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCC
Confidence 456777888999999999999999998887754 38899999886543322222234454467776655
No 125
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.36 E-value=4.5e-06 Score=61.25 Aligned_cols=44 Identities=11% Similarity=0.042 Sum_probs=35.3
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
.++.+|++|++.||++|+...+.|.++.+++.. ++.++.|..+.
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~ 62 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD 62 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC
Confidence 455667777799999999999999998888754 68888887653
No 126
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.36 E-value=1.9e-06 Score=63.30 Aligned_cols=45 Identities=13% Similarity=0.101 Sum_probs=35.4
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
+.++.+|++|++.||+.|+...+.|.++..++.+ ++.++.|..+.
T Consensus 16 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~ 60 (109)
T 2yzu_A 16 GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDE 60 (109)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTT
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCC
Confidence 3445667777899999999999999998887753 48888887654
No 127
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.33 E-value=2.8e-06 Score=66.11 Aligned_cols=41 Identities=20% Similarity=0.182 Sum_probs=34.6
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
++.+|++|++.||++|+...+.|.++.+++ .++.++.|..+
T Consensus 46 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~v~~~ 86 (139)
T 3d22_A 46 GKIVLANFSARWCGPSRQIAPYYIELSENY--PSLMFLVIDVD 86 (139)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETT
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCc
Confidence 456777778999999999999999988876 36899998876
No 128
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.33 E-value=8e-06 Score=59.18 Aligned_cols=42 Identities=12% Similarity=0.054 Sum_probs=34.6
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
.++.+|++|++.||++|+...+.|.++.+++.+ +.++.|..+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~ 56 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSD 56 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETT
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECC
Confidence 455677777899999999999999998877654 888888875
No 129
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.33 E-value=3.1e-06 Score=64.08 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=41.5
Q ss_pred ccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC
Q 025441 71 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 71 ~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
.++..+.+.+.+.+.-.-.+.+....++.+|++|++.||++|+...+.|.++.+++.+ +.++.|..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~ 75 (122)
T 2vlu_A 8 AAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE 75 (122)
T ss_dssp ----CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT
T ss_pred cCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC
Confidence 3555566666544321111111101345566667799999999999999998877653 8888888764
No 130
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.32 E-value=6.1e-07 Score=69.76 Aligned_cols=69 Identities=14% Similarity=0.199 Sum_probs=48.5
Q ss_pred EecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCC--CEEEEEecCCHHHHHHHHHHcCC
Q 025441 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 80 L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~G--v~vVaVs~d~~~~~~~f~~~~~l 153 (252)
+.+.+++.+. ++...++.+|++|++.||++|+...+.|.++..++.+.+ +.++.|..+... .+++++++
T Consensus 19 v~~l~~~~~~--~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~v 89 (140)
T 2dj1_A 19 VWVLNDGNFD--NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS---MLASKFDV 89 (140)
T ss_dssp EEECCTTTHH--HHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH---HHHHHTTC
T ss_pred CEEcChHhHH--HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH---HHHHHCCC
Confidence 3444444433 233456778888999999999999999999999988764 777777776543 34444454
No 131
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.32 E-value=6.4e-06 Score=60.73 Aligned_cols=44 Identities=16% Similarity=0.124 Sum_probs=34.9
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
+.++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~ 61 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNID 61 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETT
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECC
Confidence 3456777788899999999999999988877654 4777777765
No 132
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.31 E-value=3e-07 Score=75.87 Aligned_cols=68 Identities=16% Similarity=0.217 Sum_probs=47.7
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH-HHHHHHH--HcCCcceeeecCChHH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE-QARTFSE--QTKFKGEVYADPNHSS 165 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~-~~~~f~~--~~~l~fpllsDp~~~l 165 (252)
+++++|+.||++|||+|+.+++.|.++..++ .++.++.|..|... .+++|.+ -.++|--++.|.+..+
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~--~~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~ 123 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQ--PNIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNL 123 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHC--TTEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCE
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHC--CCcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCE
Confidence 4567888899999999999999999988765 36888888776432 2333432 1235555788876443
No 133
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.30 E-value=1.1e-05 Score=59.13 Aligned_cols=43 Identities=9% Similarity=0.061 Sum_probs=34.7
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
.++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~ 62 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVD 62 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccc
Confidence 456777788899999999999999998887754 4777777764
No 134
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.29 E-value=2e-07 Score=70.18 Aligned_cols=71 Identities=10% Similarity=0.038 Sum_probs=48.4
Q ss_pred CCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcceeeecCC
Q 025441 90 ISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPN 162 (252)
Q Consensus 90 ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpllsDp~ 162 (252)
+.+...+++.+|++|++.||++|+...+.|.++.+++. ++.++.|..+....+.+-..-.++|.-++.+..
T Consensus 17 f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 87 (109)
T 3f3q_A 17 FDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDELGDVAQKNEVSAMPTLLLFKNG 87 (109)
T ss_dssp HHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCccCEEEEEECC
Confidence 33444556778888899999999999999999888764 589999988765433222222234433455533
No 135
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.26 E-value=3.9e-06 Score=65.12 Aligned_cols=45 Identities=13% Similarity=0.042 Sum_probs=36.5
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
+.++.+|++|++.||++|+...+.|.++.+++.+ ++.++.|..+.
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~ 82 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQ 82 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTT
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC
Confidence 4566788888999999999999999998887754 47888887653
No 136
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.25 E-value=3.2e-07 Score=70.74 Aligned_cols=82 Identities=13% Similarity=0.139 Sum_probs=52.3
Q ss_pred EEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhC-CCEEEEEecCCHHHHHHHHHHcC---Cc
Q 025441 79 KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGSVEQARTFSEQTK---FK 154 (252)
Q Consensus 79 ~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~-Gv~vVaVs~d~~~~~~~f~~~~~---l~ 154 (252)
.+.+.+++.+...-. ..++.+|++|++.||++|+...+.|.++..++... ++.++.|..+.... ..++++ +|
T Consensus 8 ~v~~l~~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~v~~~P 83 (133)
T 2dj3_A 8 PVKVVVGKTFDAIVM-DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDI---TNDQYKVEGFP 83 (133)
T ss_dssp SSEECCTTTCCCCCT-CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCC---CCSSCCCSSSS
T ss_pred ceEEEcCCCHHHHhc-cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHH---HHhhcCCCcCC
Confidence 344555544433221 23567888889999999999999999998888753 57777777664322 223344 34
Q ss_pred ceeeecCChH
Q 025441 155 GEVYADPNHS 164 (252)
Q Consensus 155 fpllsDp~~~ 164 (252)
.-++.|.+..
T Consensus 84 t~~~~~~g~~ 93 (133)
T 2dj3_A 84 TIYFAPSGDK 93 (133)
T ss_dssp EEEEECTTCT
T ss_pred EEEEEeCCCc
Confidence 3356665543
No 137
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.24 E-value=1.8e-06 Score=67.30 Aligned_cols=66 Identities=9% Similarity=0.088 Sum_probs=48.2
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcC---CcceeeecCChHH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPNHSS 165 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~---l~fpllsDp~~~l 165 (252)
.++.+|++|++.||++|+...+.|.++..++.+ ++.++.|..+.... ++++++ +|.-++.|.+.++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~---l~~~~~v~~~Pt~~~~~~~G~~ 105 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQE---LAGAFGIRSIPSILFIPMEGKP 105 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHH---HHHHTTCCSSCEEEEECSSSCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHH---HHHHcCCCCCCEEEEECCCCcE
Confidence 445677777899999999999999998887754 48999999886543 334444 4444677776654
No 138
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.22 E-value=1.3e-05 Score=60.61 Aligned_cols=41 Identities=22% Similarity=0.182 Sum_probs=31.3
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~ 138 (252)
+++.||+.|++.||++|+...+.+.++.+++. ++.++.|..
T Consensus 19 ~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~ 59 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKMIAPKLEELSQSMS--DVVFLKVDV 59 (105)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEET
T ss_pred CCCEEEEEEECCCCCCccCCCcchhhhhhccC--CeEEEEEec
Confidence 35678888899999999999999988776553 455555544
No 139
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.22 E-value=7.5e-07 Score=66.17 Aligned_cols=51 Identities=12% Similarity=0.169 Sum_probs=40.8
Q ss_pred CCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 90 ISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 90 ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
+.+....++.+|++|++.||++|+...+.|.++.+++ .++.++.|..+...
T Consensus 11 ~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~--~~~~~~~vd~~~~~ 61 (105)
T 4euy_A 11 LATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENY--NYVEKIEILLQDMQ 61 (105)
T ss_dssp CSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTC--TTEEEEEEEECCC-
T ss_pred HHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHc--CCceEEEEECCCCH
Confidence 4444455677888889999999999999999988877 36889999887654
No 140
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.21 E-value=5.7e-07 Score=72.83 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=32.1
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHH---HHhHHHHHhCCCEEEEEecCCH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~Gv~vVaVs~d~~ 141 (252)
+++.||+.||++||++|+.....+ .++.+.+++ ++.++.|..+..
T Consensus 46 ~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~ 93 (172)
T 3f9u_A 46 HNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNK 93 (172)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcc
Confidence 467788899999999999863333 333444433 789999988753
No 141
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.19 E-value=4.7e-08 Score=79.71 Aligned_cols=90 Identities=12% Similarity=0.198 Sum_probs=55.3
Q ss_pred cCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHH--HHHHHH
Q 025441 72 KNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ--ARTFSE 149 (252)
Q Consensus 72 g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~--~~~f~~ 149 (252)
....+++...|.+ +.+..... .++.||+.|++.||++|+.+++.|.++.... +.++.++.|..+.... ...|.-
T Consensus 24 ~~~~~~i~w~~~~-~~~~~~~~--~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~-~~~~~~~~v~~d~~~~~~~~~~~~ 99 (164)
T 1sen_A 24 KGFGDHIHWRTLE-DGKKEAAA--SGLPLMVIIHKSWCGACKALKPKFAESTEIS-ELSHNFVMVNLEDEEEPKDEDFSP 99 (164)
T ss_dssp TTSCTTSCBCCHH-HHHHHHHH--HTCCEEEEEECTTCHHHHHHHHHHHTCHHHH-HHHTTSEEEEEEGGGSCSCGGGCT
T ss_pred ccccccccccCHH-HHHHHHHh--cCCeEEEEEECCCCHHHHHHHHHHHHHHHHh-hcCCeEEEEEecCCchHHHHHhcc
Confidence 3344555554444 34444332 3455677778999999999999999976543 3357778887765432 222321
Q ss_pred H-cCCcceeeecCChHH
Q 025441 150 Q-TKFKGEVYADPNHSS 165 (252)
Q Consensus 150 ~-~~l~fpllsDp~~~l 165 (252)
. .++|.-++.|++.++
T Consensus 100 ~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 100 DGGYIPRILFLDPSGKV 116 (164)
T ss_dssp TCSCSSEEEEECTTSCB
T ss_pred cCCcCCeEEEECCCCCE
Confidence 1 236666788877654
No 142
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.19 E-value=1.6e-06 Score=65.81 Aligned_cols=72 Identities=8% Similarity=-0.001 Sum_probs=51.0
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcC---CcceeeecCChHHHHHcC
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPNHSSYEALS 170 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~---l~fpllsDp~~~ly~alG 170 (252)
+.++.+|++|++.||++|+...+.|.++.+++.. ++.++.|..+.... ++++++ +|--++.|.+..+.+..|
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~---~~~~~~v~~~Pt~~~~~~~~~~~~~~g 93 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQ---TCQKAGIKAYPSVKLYQYERAKKSIWE 93 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHH---HHHHTTCCSSSEEEEEEEEGGGTEEEE
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHH---HHHHcCCCccceEEEEeCCCccceeec
Confidence 3456677788999999999999999998888754 69999999886543 334445 443466666665443333
No 143
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.17 E-value=2e-06 Score=65.92 Aligned_cols=67 Identities=12% Similarity=0.054 Sum_probs=47.6
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh---CCCEEEEEecCCHHH-HHHHHHHcCCcceeeecCCh
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVEQ-ARTFSEQTKFKGEVYADPNH 163 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~---~Gv~vVaVs~d~~~~-~~~f~~~~~l~fpllsDp~~ 163 (252)
.++.+|++|++.||++|+...+.|.++..++.+ .++.++.|..+.... .++| .-.++|--++.|.+.
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~-~v~~~Pt~~~~~~g~ 94 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRY-GIRGFPTIKIFQKGE 94 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHH-TCCSSSEEEEEETTE
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhC-CCCeeCeEEEEeCCC
Confidence 456778888999999999999999999888874 568888888875432 2333 222455445666554
No 144
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.15 E-value=3.4e-06 Score=64.47 Aligned_cols=53 Identities=8% Similarity=-0.039 Sum_probs=42.4
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
++ +|++|++.||++|+...+.|.++.+++.+.++.++.|..+.... +++++++
T Consensus 23 ~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~v 75 (126)
T 1x5e_A 23 GD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPG---LSGRFII 75 (126)
T ss_dssp SE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHH---HHHHTTC
T ss_pred CC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHH---HHHHcCC
Confidence 45 77888999999999999999999988877789999999876543 3444444
No 145
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.15 E-value=1.4e-06 Score=65.10 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=37.6
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
++.+|++|++.||++|+...+.|.++..+++..++.++.|..+...
T Consensus 21 ~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 66 (112)
T 3d6i_A 21 DKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS 66 (112)
T ss_dssp TCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH
Confidence 5667778899999999999999999988876678999999988643
No 146
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.15 E-value=1.6e-06 Score=63.55 Aligned_cols=47 Identities=9% Similarity=0.077 Sum_probs=37.8
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~ 143 (252)
+++.+|++|++.||++|+...+.+.++.+++.+. +.++.|..+....
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~ 64 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPS 64 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHH
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHH
Confidence 3455666677999999999999999998887654 8999999876543
No 147
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.13 E-value=1.3e-06 Score=66.44 Aligned_cols=45 Identities=11% Similarity=0.093 Sum_probs=37.8
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
+++.+|++|++.||++|+...+.|.++.+++.+ +.++.|..+...
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~ 74 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQ 74 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCH
Confidence 456778888999999999999999998887744 899999988654
No 148
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.13 E-value=1.5e-06 Score=65.68 Aligned_cols=81 Identities=14% Similarity=0.032 Sum_probs=52.9
Q ss_pred EecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh----CCCEEEEEecCCHHHHHHHHHHcCCcc
Q 025441 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQARTFSEQTKFKG 155 (252)
Q Consensus 80 L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~----~Gv~vVaVs~d~~~~~~~f~~~~~l~f 155 (252)
+.+.+++.+...- ...++.+|+.|++.||++|+...+.|.++..++.. .++.++.|..+..+ +.+ .-.++|-
T Consensus 9 v~~l~~~~f~~~v-~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~~Pt 84 (121)
T 2djj_A 9 VTVVVAKNYNEIV-LDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQGFPT 84 (121)
T ss_dssp SEECCTTTTTTSS-SCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSSSSE
T ss_pred eEEecccCHHHHh-hcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCcCCe
Confidence 3445555443221 13456677788899999999999999999988875 36889989887543 111 2233444
Q ss_pred eeeecCChH
Q 025441 156 EVYADPNHS 164 (252)
Q Consensus 156 pllsDp~~~ 164 (252)
-++.|.+..
T Consensus 85 ~~~~~~~~~ 93 (121)
T 2djj_A 85 IKLYPAGAK 93 (121)
T ss_dssp EEEECSSCT
T ss_pred EEEEeCcCC
Confidence 466666543
No 149
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.12 E-value=8.6e-07 Score=67.86 Aligned_cols=49 Identities=14% Similarity=0.062 Sum_probs=41.3
Q ss_pred cCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 94 ~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
.+.++.+|++|++.||+.|+...+.|.++.+++...++.++.|..+...
T Consensus 30 l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~ 78 (121)
T 2j23_A 30 TGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQS 78 (121)
T ss_dssp HSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCH
T ss_pred HcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCH
Confidence 3456677778889999999999999999888887778999999988653
No 150
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.07 E-value=3.7e-06 Score=67.33 Aligned_cols=54 Identities=13% Similarity=0.148 Sum_probs=41.5
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
.++.||+.||+.||++|+.+.+.|.++.+++.+. +.++.|..+.... +++++++
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~---l~~~~~v 75 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAV---YTQYFDI 75 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCH---HHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHH---HHHHcCC
Confidence 4567888889999999999999999988877443 8888888875433 3444454
No 151
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.07 E-value=2.5e-06 Score=62.36 Aligned_cols=45 Identities=18% Similarity=0.136 Sum_probs=37.0
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
.++.+|++|++.||+.|+...+.|.++.+++. ++.++.|..+...
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~ 62 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNE 62 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCH
Confidence 34566777789999999999999999887764 7999999988653
No 152
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.03 E-value=2.8e-06 Score=62.25 Aligned_cols=46 Identities=13% Similarity=0.184 Sum_probs=37.4
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~ 143 (252)
+++.+|++|++.||++|+...+.+.++.+++. ++.++.|..+....
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~ 64 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDDCQD 64 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTTCHH
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhhhHH
Confidence 35567777789999999999999999888764 49999999876543
No 153
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.03 E-value=6e-06 Score=60.37 Aligned_cols=45 Identities=11% Similarity=0.076 Sum_probs=36.0
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~ 141 (252)
.++.+|++|++.||++|+...+.|.++.+++.. .+.++.|..+..
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 61 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEA 61 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcch
Confidence 345566677799999999999999998887754 488999988754
No 154
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.03 E-value=4.8e-06 Score=70.22 Aligned_cols=58 Identities=12% Similarity=0.169 Sum_probs=45.6
Q ss_pred ccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCC--CEEEEEecCCHHHHHHHHHHcCC
Q 025441 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 93 l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~G--v~vVaVs~d~~~~~~~f~~~~~l 153 (252)
+..+++.+|+.|++.||++|+..++.|.++.+++...+ +.++.|..+.... +++++++
T Consensus 28 ~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~v 87 (241)
T 3idv_A 28 FVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASV---LASRFDV 87 (241)
T ss_dssp HHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHH---HHHHTTC
T ss_pred HHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHH---HHHhcCC
Confidence 33456778888999999999999999999999998776 8888888876533 3444453
No 155
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.02 E-value=1.7e-05 Score=60.79 Aligned_cols=46 Identities=7% Similarity=-0.192 Sum_probs=37.2
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh----CCCEEEEEecCCH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSV 141 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~----~Gv~vVaVs~d~~ 141 (252)
.++.+|+.|++.||++|+...+.+.++..++.. .++.++.|..+..
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~ 81 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY 81 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTC
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcccc
Confidence 356788888999999999999999999887753 3477888888754
No 156
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.98 E-value=5.5e-06 Score=61.48 Aligned_cols=59 Identities=12% Similarity=0.192 Sum_probs=42.9
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHH-HHHHHHcCCcceee
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA-RTFSEQTKFKGEVY 158 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~-~~f~~~~~l~fpll 158 (252)
++.+|++|++.||++|+...+.|.++.+++. ++.++.|..+....+ ++| .-.++|.-++
T Consensus 26 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~-~v~~~Pt~~~ 85 (113)
T 1ti3_A 26 QKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEW-NVEAMPTFIF 85 (113)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHH-HCSSTTEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhC-CCCcccEEEE
Confidence 5678888899999999999999998887764 789999998765433 333 2334553333
No 157
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.97 E-value=1.7e-05 Score=60.26 Aligned_cols=45 Identities=13% Similarity=0.070 Sum_probs=36.6
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~ 141 (252)
.++.+|++|++.||++|+...+.|.++..++.. ++.++.|..+..
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~ 74 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDH 74 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCC
Confidence 345667777899999999999999998887754 589999988754
No 158
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.96 E-value=6.6e-06 Score=61.64 Aligned_cols=46 Identities=11% Similarity=0.168 Sum_probs=38.3
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
+.++.+|++|++.||+.|+...+.|.++.+++. ++.++.|..+...
T Consensus 24 ~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~ 69 (112)
T 1syr_A 24 SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEVS 69 (112)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTTH
T ss_pred ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCCH
Confidence 345677788889999999999999999888764 6999999988654
No 159
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.95 E-value=1.3e-05 Score=63.75 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=44.1
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcC---Ccceeeec
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYAD 160 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~---l~fpllsD 160 (252)
++.+|++|++.||++|+...+.|.++..++ .++.++.|..+.... ++++++ +|.-++.|
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~~~~~~---l~~~~~v~~~Pt~~~~~ 93 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKEL--PQVSFVKLEAEGVPE---VSEKYEISSVPTFLFFK 93 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHH---HHHHTTCCSSSEEEEEE
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHc--CCeEEEEEECCCCHH---HHHHcCCCCCCEEEEEE
Confidence 566777888999999999999999988775 479999999886543 333444 44445666
No 160
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.95 E-value=1.2e-05 Score=60.91 Aligned_cols=45 Identities=16% Similarity=0.073 Sum_probs=36.9
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~ 141 (252)
+.++.+|++|++.||++|+...+.|.++.+++.+ +.++.|..+..
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~ 72 (114)
T 2oe3_A 28 KQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDES 72 (114)
T ss_dssp HHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTC
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC
Confidence 3456777788899999999999999998887644 89999988754
No 161
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.95 E-value=1.2e-05 Score=59.68 Aligned_cols=47 Identities=11% Similarity=0.170 Sum_probs=38.2
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
+.++.+|++|++.||++|+...+.|.++.+++... +.++.|..+...
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~~ 69 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDPNP 69 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTTCH
T ss_pred cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCCCH
Confidence 34566777778999999999999999988877543 999999987643
No 162
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.95 E-value=1.2e-06 Score=70.64 Aligned_cols=49 Identities=18% Similarity=0.139 Sum_probs=39.2
Q ss_pred ccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 93 l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
+.+.++.+|++|++.||++|+...+.|+++..++.. .+.++.|..+...
T Consensus 60 ~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~~ 108 (155)
T 2ppt_A 60 AERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAHP 108 (155)
T ss_dssp HTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTST
T ss_pred HHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCccH
Confidence 334455677777899999999999999999888864 4999999987653
No 163
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.95 E-value=1.9e-05 Score=59.68 Aligned_cols=55 Identities=16% Similarity=0.266 Sum_probs=39.3
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH---HHHHHHHHHcCC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~---~~~~~f~~~~~l 153 (252)
.++.+|++|++.|||+|+...+.|.++.+++ +..++.|..+.. +...++++++++
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~i 85 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAET---KAHIYFINSEEPSQLNDLQAFRSRYGI 85 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCCEEEETTCGGGHHHHHHHHHHHTC
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhc---CCeEEEEECCCcCcHHHHHHHHHHcCC
Confidence 4456788889999999999999999887754 356677766543 344455566554
No 164
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.94 E-value=2.1e-05 Score=58.10 Aligned_cols=44 Identities=11% Similarity=0.156 Sum_probs=37.0
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~ 141 (252)
.++.+|++|++.||++|+...+.|.++..++ .++.++.|..+..
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~~vd~~~~ 63 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY--PQAVFLEVDVHQC 63 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTS
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHC--CCcEEEEEECccC
Confidence 4566777889999999999999999988877 4699999998764
No 165
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.93 E-value=3.7e-06 Score=65.68 Aligned_cols=43 Identities=21% Similarity=0.228 Sum_probs=35.0
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
++.+|++|++.||++|+...+.|.++..++ ++.++.|..+...
T Consensus 40 ~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~ 82 (133)
T 3cxg_A 40 NSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHP 82 (133)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchH
Confidence 467888889999999999999998876655 6888888877543
No 166
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.93 E-value=1.1e-05 Score=62.98 Aligned_cols=53 Identities=19% Similarity=0.225 Sum_probs=40.2
Q ss_pred EEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH------HHHHHHHHHcCCc
Q 025441 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV------EQARTFSEQTKFK 154 (252)
Q Consensus 99 vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~------~~~~~f~~~~~l~ 154 (252)
.+|++|++.||++|+.+++.|.++.+++. +.++.|..++. +...++++++++.
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~ 91 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAARLEMNKAGVE 91 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHHHHHHHHHTCC
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhhHHHHHHcCCc
Confidence 67778899999999999999998877653 88999988543 3445555565643
No 167
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.15 E-value=1.3e-06 Score=63.63 Aligned_cols=46 Identities=20% Similarity=0.156 Sum_probs=35.5
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~ 141 (252)
+.++.+|++|++.||++|+...+.+.++.+++.. ++.++.|..+..
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 62 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDEN 62 (106)
Confidence 3455677777899999999999999988887754 577777777643
No 168
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.92 E-value=8e-06 Score=63.58 Aligned_cols=54 Identities=15% Similarity=0.042 Sum_probs=42.4
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
++.+|++|++.||++|+...+.|.++..++...++.++.|..+... ++++++++
T Consensus 26 ~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~---~~~~~~~v 79 (137)
T 2dj0_A 26 RVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYT---DVSTRYKV 79 (137)
T ss_dssp TSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCH---HHHHHTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCH---HHHHHccC
Confidence 3467778899999999999999999998887667999999887543 34445555
No 169
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.91 E-value=2.4e-05 Score=57.73 Aligned_cols=46 Identities=13% Similarity=0.242 Sum_probs=37.7
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
.++.+|++|++.||++|+...+.|.++..++.+ .+.++.|..+...
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~ 66 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEK 66 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCH
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcCh
Confidence 456677777899999999999999998887754 5899999988654
No 170
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.91 E-value=8.1e-06 Score=59.75 Aligned_cols=46 Identities=17% Similarity=0.131 Sum_probs=37.5
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
+++.+|++|++.||++|+...+.|.++.++++ .++.++.|..+...
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~~~ 64 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDECE 64 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTTCH
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccchH
Confidence 45567777789999999999999999888765 57889999887543
No 171
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.91 E-value=4.7e-06 Score=61.58 Aligned_cols=54 Identities=9% Similarity=0.005 Sum_probs=39.7
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhC--CCEEEEEecCCHHHHHHHHHHcCC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS--GVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~--Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
++.+|+.|++.||++|+...+.|.++..++... ++.++.|..+.... +++++++
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~v 76 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN---ICSKYSV 76 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH---HHHHTTC
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh---HHHhcCC
Confidence 346677788999999999999999988766443 68888888875533 3444443
No 172
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.90 E-value=6.9e-06 Score=61.41 Aligned_cols=52 Identities=17% Similarity=0.183 Sum_probs=40.0
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
++.+|++|++.||++|+...+.|.++.+++. ++.++.|..+... ++.+++++
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~---~~~~~~~v 79 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDELK---DVAEAYNV 79 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSH---HHHHHTTC
T ss_pred CCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccCH---HHHHHcCC
Confidence 4567777789999999999999999888764 7999999988643 23444453
No 173
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.87 E-value=7.1e-06 Score=61.83 Aligned_cols=44 Identities=18% Similarity=0.171 Sum_probs=36.4
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
+++.+|++|++.||++|+...+.|.++.+++ ++.++.|..+...
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~ 75 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLE 75 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccH
Confidence 4566777788999999999999999887766 8999999987543
No 174
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.85 E-value=1.3e-05 Score=60.20 Aligned_cols=46 Identities=13% Similarity=0.089 Sum_probs=37.2
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
.++.+|++|++.||++|+...+.|.++.+++.. ++.++.|..+...
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~ 74 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTNP 74 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCCH
Confidence 345677777899999999999999998887654 5899999987543
No 175
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.85 E-value=1.1e-05 Score=63.32 Aligned_cols=54 Identities=15% Similarity=0.201 Sum_probs=41.7
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
.++.+|++|++.||+.|+...+.|.++..++.. .+.++.|..+.... +++++++
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~---l~~~~~v 76 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATNPW---TAEKYGV 76 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTCHH---HHHHHTC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcCHh---HHHHCCC
Confidence 456677777899999999999999999888765 49999999886543 3344454
No 176
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.85 E-value=3e-05 Score=66.34 Aligned_cols=65 Identities=12% Similarity=0.023 Sum_probs=47.8
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh--CCCEEEEEecCCHHHHHHHHHHcCC---cceeeecC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVEQARTFSEQTKF---KGEVYADP 161 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~--~Gv~vVaVs~d~~~~~~~f~~~~~l---~fpllsDp 161 (252)
.++.+|+.|++.||++|+...+.+.++..++.+ .++.++.|.++.. ...+.++++++ |--++.++
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~-~~~~l~~~~~v~~~Pt~~~~~~ 98 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEE-TNSAVCRDFNIPGFPTVRFFXA 98 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTST-TTHHHHHHTTCCSSSEEEEECT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCch-hhHHHHHHcCCCccCEEEEEeC
Confidence 446788888999999999999999999998876 4789999998432 12334455554 43356665
No 177
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.82 E-value=6.7e-06 Score=71.71 Aligned_cols=45 Identities=9% Similarity=0.062 Sum_probs=38.5
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
++.||+.||++||++|+...+.|.++..++.. .+.++.|..+...
T Consensus 26 ~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~ 70 (287)
T 3qou_A 26 TTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQ 70 (287)
T ss_dssp TSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCH
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCH
Confidence 56788888999999999999999999888763 4999999988643
No 178
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.80 E-value=2.9e-05 Score=61.51 Aligned_cols=44 Identities=18% Similarity=0.099 Sum_probs=36.9
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~ 141 (252)
++.+|+.|++.||++|+.+.+.|.++.+++.. .+.++.|..+..
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~ 66 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEV 66 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccC
Confidence 56778888999999999999999999888743 488888888753
No 179
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.77 E-value=3.9e-05 Score=59.29 Aligned_cols=46 Identities=11% Similarity=0.128 Sum_probs=37.8
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
..++.+|++|++.||++|+...+.|.++..++ .++.++.|..+...
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~d~~~ 80 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEF--PTVKFAKVDADNNS 80 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHC--TTSEEEEEETTTCH
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHC--CCCEEEEEECCCCH
Confidence 34566777778999999999999999988877 36999999987543
No 180
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.75 E-value=5.6e-05 Score=58.79 Aligned_cols=46 Identities=11% Similarity=-0.021 Sum_probs=37.7
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
+.++ +|++|++.||++|+...+.|.++..++.. ++.++.|..+...
T Consensus 49 ~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~ 94 (140)
T 1v98_A 49 GAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEHP 94 (140)
T ss_dssp CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCH
T ss_pred cCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCCH
Confidence 3456 88888899999999999999998887754 5889999887643
No 181
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.73 E-value=4.3e-05 Score=61.74 Aligned_cols=49 Identities=20% Similarity=0.247 Sum_probs=36.5
Q ss_pred CCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe
Q 025441 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 85 G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs 137 (252)
+..+.+++- +.|++|+.|+.+|||+|+...+.|.++..+..+ +.++.+.
T Consensus 12 ~~~~~~G~~--~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~ 60 (175)
T 3gyk_A 12 PNAPVLGNP--EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYRE 60 (175)
T ss_dssp TTSCEEECT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEE
T ss_pred CCCCCcCCC--CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEe
Confidence 444556654 678899999999999999999999887765432 5555544
No 182
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.72 E-value=7.8e-06 Score=69.31 Aligned_cols=47 Identities=15% Similarity=0.107 Sum_probs=38.7
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
+.++.+|+.|++.||++|+..++.|.++.+++... +.++.|..+...
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~~ 74 (222)
T 3dxb_A 28 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNP 74 (222)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCT
T ss_pred hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCCCH
Confidence 34567777788999999999999999998887643 899999988653
No 183
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.72 E-value=9.5e-06 Score=68.03 Aligned_cols=54 Identities=11% Similarity=0.073 Sum_probs=41.5
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
.++.+|++|++.||++|+...+.+.++..++.. .+.++.|..+.... +++++++
T Consensus 113 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~~---l~~~~~v 166 (210)
T 3apq_A 113 SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDRM---LCRMKGV 166 (210)
T ss_dssp HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHH---HHHHTTC
T ss_pred cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccHH---HHHHcCC
Confidence 456778888999999999999999998888754 48999999876543 3444444
No 184
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.69 E-value=3.9e-05 Score=58.77 Aligned_cols=43 Identities=14% Similarity=0.244 Sum_probs=35.7
Q ss_pred CeEEEEEEcCC-------CCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC
Q 025441 97 RKAVVAFARHF-------GCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 97 ~~vVLvF~R~~-------~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
++.+|+.|++. ||++|+...+.|.++.+++.. ++.++.|..++
T Consensus 24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~ 73 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGE 73 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCC
T ss_pred CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCC
Confidence 56777788999 999999999999988776643 68899998864
No 185
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.86 E-value=5.7e-06 Score=63.43 Aligned_cols=74 Identities=9% Similarity=0.296 Sum_probs=47.0
Q ss_pred CCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHH---HHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcC---Ccceee
Q 025441 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVY 158 (252)
Q Consensus 85 G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~---l~fpll 158 (252)
.+.+.+... .++.+|++|++.||++|+...+.+ .++...+.. ++.++.|..++. ...++.++++ +|.-++
T Consensus 9 ~~~~~~~~~--~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~~~~~~~~~v~~~Pt~~~ 84 (130)
T 2lst_A 9 PEALALAQA--HGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTP-EGQELARRYRVPGTPTFVF 84 (130)
Confidence 445555544 456777788899999999999888 666665543 577777777532 2223333434 454467
Q ss_pred ecCC
Q 025441 159 ADPN 162 (252)
Q Consensus 159 sDp~ 162 (252)
.|++
T Consensus 85 ~d~~ 88 (130)
T 2lst_A 85 LVPK 88 (130)
Confidence 7753
No 186
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.68 E-value=1.4e-05 Score=60.00 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=34.8
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~ 141 (252)
.++.+|++|++.||++|+...+.|.++..++. ++.++.|..+..
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~ 61 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEAR 61 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGC
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCC
Confidence 34556777889999999999999988776653 688888887643
No 187
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.67 E-value=5.8e-05 Score=67.25 Aligned_cols=66 Identities=9% Similarity=0.088 Sum_probs=47.4
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc-ce--eeecCCh
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE--VYADPNH 163 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~-fp--llsDp~~ 163 (252)
.++.+|+.|++.||++|+..++.+.++..++... +.++.|.++..+ ..++++++++. +| ++.+.+.
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~~-~~~l~~~~~I~~~Pt~~~~~~g~ 102 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLNK-NKALCAKYDVNGFPTLMVFRPPK 102 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTSTT-THHHHHHTTCCBSSEEEEEECCC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCcc-CHHHHHhCCCCccceEEEEECCc
Confidence 4566778889999999999999999999888553 899999988421 23445555643 34 4555554
No 188
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.62 E-value=4.5e-05 Score=73.41 Aligned_cols=66 Identities=6% Similarity=-0.072 Sum_probs=49.3
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh--CCCEEEEEecCCHHHHHHHHHHcCCc-ce--eeecC
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVEQARTFSEQTKFK-GE--VYADP 161 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~--~Gv~vVaVs~d~~~~~~~f~~~~~l~-fp--llsDp 161 (252)
+.++.+||.|++.||++|+.+++.+.++.+++.+ .++.++.|.++.. ...+.++++++. +| ++.|+
T Consensus 28 ~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d-~~~~l~~~~~V~~~PTl~~f~~ 98 (519)
T 3t58_A 28 GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEE-TNSAVCREFNIAGFPTVRFFQA 98 (519)
T ss_dssp SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSG-GGHHHHHHTTCCSBSEEEEECT
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcc-ccHHHHHHcCCcccCEEEEEcC
Confidence 3457888889999999999999999999999876 4688999998642 233455566653 33 56664
No 189
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.58 E-value=2.6e-05 Score=54.81 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=32.2
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 100 VLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
.|+.|++.||++|+...+.|.++..++. .++.++.|..+
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~ 42 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFG-DKIDVEKIDIM 42 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHC-SSCCEEEECTT
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhc-CCeEEEEEECC
Confidence 5777899999999999999998877764 36788888775
No 190
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.56 E-value=0.00015 Score=55.70 Aligned_cols=44 Identities=16% Similarity=0.124 Sum_probs=31.0
Q ss_pred CCCeEEEEEEcCCCCH--------------hhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 95 KDRKAVVAFARHFGCV--------------LCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp--------------~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
+.++.+|+.|++.||+ +|+...+.+.++..++.. ++.++.|..+
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d 76 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNID 76 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETT
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECC
Confidence 4456777788999999 999999999988887754 4788888765
No 191
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.50 E-value=0.00016 Score=60.37 Aligned_cols=55 Identities=7% Similarity=0.018 Sum_probs=42.0
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh---CCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~---~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
+++++|+.|++.||++|+...+.+.++..++.+ .++.++.|..+... +..+++++
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~v 190 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYP---EWADQYNV 190 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCH---HHHHHTTC
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCH---HHHHhCCC
Confidence 467768888999999999999999999888874 36888888876432 23444454
No 192
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.49 E-value=0.00016 Score=56.49 Aligned_cols=42 Identities=14% Similarity=0.006 Sum_probs=34.7
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
++.+|+.|++.||++|+...+.|.++..++ .++.++.|..+.
T Consensus 30 ~~~vvv~f~a~wC~~C~~~~p~l~~la~~~--~~v~~~~vd~~~ 71 (135)
T 2dbc_A 30 DLWVVIHLYRSSVPMCLVVNQHLSVLARKF--PETKFVKAIVNS 71 (135)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHC--SSEEEEEECCSS
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHC--CCcEEEEEEhhc
Confidence 357888889999999999999999987765 357788887765
No 193
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.48 E-value=0.00017 Score=68.73 Aligned_cols=61 Identities=13% Similarity=0.193 Sum_probs=45.0
Q ss_pred eEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhC-C------CEEEEEecCCHHHHHHHHHHcCC---cceeeecC
Q 025441 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-G------VALVLIGPGSVEQARTFSEQTKF---KGEVYADP 161 (252)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~-G------v~vVaVs~d~~~~~~~f~~~~~l---~fpllsDp 161 (252)
+.+||.|++.||++|+.+++.+.++..++.+. | +.++.|..+... +.++++++ |--++.++
T Consensus 43 k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~---~la~~y~V~~~PTlilf~~ 113 (470)
T 3qcp_A 43 CPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV---DLCRKYDINFVPRLFFFYP 113 (470)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH---HHHHHTTCCSSCEEEEEEE
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH---HHHHHcCCCccCeEEEEEC
Confidence 56788889999999999999999999888643 3 899999988653 34445554 43345543
No 194
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=97.47 E-value=0.00013 Score=60.37 Aligned_cols=70 Identities=10% Similarity=0.180 Sum_probs=45.6
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHH---HHhHHHHHhCCCEEEEEecCCH-HHHHHHH-------HHcCCcceeeecCChH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV-EQARTFS-------EQTKFKGEVYADPNHS 164 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~Gv~vVaVs~d~~-~~~~~f~-------~~~~l~fpllsDp~~~ 164 (252)
.++.||+.|++.||+.|+...++. .+..+.+.+ ++.+|-|..+.. +..+.|. ...++|.-++.|++.+
T Consensus 38 ~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 38 ENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKK 116 (173)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTSC
T ss_pred hCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECCCCC
Confidence 345667777899999999976632 223333333 577778877754 4444453 3457888899998876
Q ss_pred HH
Q 025441 165 SY 166 (252)
Q Consensus 165 ly 166 (252)
..
T Consensus 117 ~v 118 (173)
T 3ira_A 117 PF 118 (173)
T ss_dssp EE
T ss_pred ce
Confidence 43
No 195
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.42 E-value=8e-05 Score=52.24 Aligned_cols=41 Identities=15% Similarity=0.159 Sum_probs=33.3
Q ss_pred eEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
.+.|++|++.|||+|+...+.|.++..++. .++.++.|..+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~ 43 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVM 43 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-CceEEEEEECC
Confidence 356778899999999999999998877664 36788888775
No 196
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.39 E-value=0.00018 Score=60.89 Aligned_cols=38 Identities=18% Similarity=0.394 Sum_probs=30.9
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs 137 (252)
+++++|+.|+.+|||+|++..+.|.++.+ .+++++.+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~ 122 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNA----LGITVRYLA 122 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHH----TTEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHh----CCcEEEEEE
Confidence 46788888899999999999999877643 378887764
No 197
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.38 E-value=5.1e-05 Score=56.39 Aligned_cols=46 Identities=15% Similarity=0.123 Sum_probs=36.7
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhC--CCEEEEEecCC
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS--GVALVLIGPGS 140 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~--Gv~vVaVs~d~ 140 (252)
.+++.+|++|++.||++|+...+.+.++.+++.+. ++.++.|..+.
T Consensus 22 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~ 69 (120)
T 1mek_A 22 AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE 69 (120)
T ss_dssp HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT
T ss_pred ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC
Confidence 34567788889999999999999999998888764 46677777654
No 198
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.38 E-value=6.2e-06 Score=62.57 Aligned_cols=29 Identities=14% Similarity=0.283 Sum_probs=23.9
Q ss_pred eEEEEEEcCCCCHhhHHHHHHHHHhHHHH
Q 025441 98 KAVVAFARHFGCVLCRKRADYLAAKKDVM 126 (252)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~ 126 (252)
+.+|+.|++.||++|+...+.|.++..++
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhC
Confidence 45567779999999999999998877554
No 199
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.37 E-value=9.1e-06 Score=61.92 Aligned_cols=43 Identities=19% Similarity=0.188 Sum_probs=35.8
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~ 141 (252)
++.+|++|++.||++|+...+.|.++..++. ++.++.|..+..
T Consensus 36 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~ 78 (130)
T 1wmj_A 36 GKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDEL 78 (130)
T ss_dssp TCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTS
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccch
Confidence 4567777789999999999999999887764 788888888754
No 200
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.37 E-value=0.00026 Score=58.10 Aligned_cols=55 Identities=18% Similarity=0.108 Sum_probs=41.9
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
..+.||+-||+.||++|+...+-|.++.+++.+ .+.++-|..|.. .++.+++++.
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~---~e~a~~y~V~ 94 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV---PDFNTMYELY 94 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC---CTTTTTTTCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC---HHHHHHcCCC
Confidence 446788888999999999999999999888743 377888887753 3455566653
No 201
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.32 E-value=0.00019 Score=67.78 Aligned_cols=60 Identities=12% Similarity=0.075 Sum_probs=47.8
Q ss_pred cCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc-ce
Q 025441 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE 156 (252)
Q Consensus 94 ~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~-fp 156 (252)
...++.+|+.|++.||++|+...+.+.++..++...++.++.|.++... ..++++++. +|
T Consensus 28 ~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~---~l~~~~~v~~~P 88 (504)
T 2b5e_A 28 IQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQ---DLCMEHNIPGFP 88 (504)
T ss_dssp HTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCH---HHHHHTTCCSSS
T ss_pred HhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCH---HHHHhcCCCcCC
Confidence 3456778888899999999999999999998887778999999988653 355565654 44
No 202
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.28 E-value=0.00047 Score=59.40 Aligned_cols=58 Identities=3% Similarity=-0.106 Sum_probs=43.3
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh---CCCEEEEEecCCHHHHHHHHHHcCC-cce
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVEQARTFSEQTKF-KGE 156 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~---~Gv~vVaVs~d~~~~~~~f~~~~~l-~fp 156 (252)
+++++|+.|++.||++|+..++.|.++..++.. .++.+..|..+.... .++++++ .+|
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~V~~vP 198 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPD---IADKYGVMSVP 198 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHH---HHHHTTCCSSS
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHH---HHHHcCCeeeC
Confidence 467888888999999999999999999888742 578888888765432 3344454 355
No 203
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=97.27 E-value=8.5e-05 Score=60.13 Aligned_cols=74 Identities=8% Similarity=0.140 Sum_probs=42.7
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHH--HHHhCCCEEEEEecCCHHHHHHHHHHcCCcceeeecCCh-HHHHHcCC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKD--VMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNH-SSYEALSF 171 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~--~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpllsDp~~-~ly~alGv 171 (252)
++.||+.|++.||++|+...+.+.+..+ ++.+.++..|-|..++.+....| .-.++|--++.|++. .+++..|.
T Consensus 44 ~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~-~v~~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 44 KKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSP-DGQYVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCT-TCCCSSEEEEECTTSCBCTTCCCS
T ss_pred CCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhc-CCCCCCEEEEECCCCCEEEEEeCC
Confidence 4556777789999999999998887522 22223444444432222222222 223566567888654 45555565
No 204
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.25 E-value=0.00036 Score=58.55 Aligned_cols=57 Identities=11% Similarity=0.149 Sum_probs=43.6
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCC--CEEEEEecCCHHHHHHHHHHcCCc
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~G--v~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
..++.+|++|++.||++|+...+.+.++..++...+ +.++.|..+... ++++++++.
T Consensus 145 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~---~l~~~~~v~ 203 (241)
T 3idv_A 145 NDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAET---DLAKRFDVS 203 (241)
T ss_dssp HHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCH---HHHHHTTCC
T ss_pred ccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCH---HHHHHcCCc
Confidence 345678888899999999999999999999887654 888888877543 344455543
No 205
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.24 E-value=0.00054 Score=62.58 Aligned_cols=59 Identities=7% Similarity=0.075 Sum_probs=44.5
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh-----CCCEEEEEecCCHHHHHHHHHHcCCc-ce
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-----SGVALVLIGPGSVEQARTFSEQTKFK-GE 156 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~-----~Gv~vVaVs~d~~~~~~~f~~~~~l~-fp 156 (252)
..++.+|+.|++.||++|+..++.+.++..++++ .++.++.|.++.. ...++++++. +|
T Consensus 20 ~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~---~~l~~~~~v~~~P 84 (382)
T 2r2j_A 20 NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH---SDIAQRYRISKYP 84 (382)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC---HHHHHHTTCCEES
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc---HHHHHhcCCCcCC
Confidence 3456788888999999999999999999988863 3488888888754 3345566654 44
No 206
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.20 E-value=0.00048 Score=47.46 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=26.5
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs 137 (252)
.+.|++.||++|+...+.|.++..++. ..+.++.|.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~~v~ 38 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELG-IDAEFEKIK 38 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTT-CCEEEEEEC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcC-CceEEEEec
Confidence 466778999999999999988877653 235555543
No 207
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.16 E-value=0.00054 Score=57.44 Aligned_cols=56 Identities=13% Similarity=0.008 Sum_probs=42.3
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc-ce
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE 156 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~-fp 156 (252)
+++++|+.|++.||++|+...+.+.++..++ .++.++.|..+... +.++++++. +|
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~--~~v~~~~vd~~~~~---~l~~~~~v~~~P 191 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN--DYITSKVIDASENQ---DLAEQFQVVGVP 191 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC--TTEEEEEEEGGGCH---HHHHHTTCCSSS
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC--CCeEEEEEECCCCH---HHHHHcCCcccC
Confidence 4678788889999999999999999987776 36888888876432 344555653 45
No 208
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.11 E-value=0.00073 Score=55.50 Aligned_cols=43 Identities=14% Similarity=0.080 Sum_probs=33.9
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
+++++|+.|+.+|||+|+...+.|.++.+++.+ ++.++-+...
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 467788888999999999999999888776644 5666666654
No 209
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.06 E-value=0.0002 Score=56.96 Aligned_cols=51 Identities=4% Similarity=-0.070 Sum_probs=32.8
Q ss_pred eEEEEEEcCCC--CHhhHHHHHHHHHhHHHHHhCCCE--EEEEecCCHHHHHHHHHHcCC
Q 025441 98 KAVVAFARHFG--CVLCRKRADYLAAKKDVMDASGVA--LVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 98 ~vVLvF~R~~~--Cp~C~~el~~L~~~~~~~~~~Gv~--vVaVs~d~~~~~~~f~~~~~l 153 (252)
+.+|++|.+.| |+.|+..++.|.++.+++ .++. ++.|..|.. .+.++++++
T Consensus 35 ~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~--~~v~~~~~~Vd~d~~---~~la~~~~V 89 (142)
T 2es7_A 35 GDGVILLSSDPRRTPEVSDNPVMIAELLREF--PQFDWQVAVADLEQS---EAIGDRFNV 89 (142)
T ss_dssp CSEEEEECCCSCC----CCHHHHHHHHHHTC--TTSCCEEEEECHHHH---HHHHHTTTC
T ss_pred CCEEEEEECCCCCCccHHHHHHHHHHHHHHh--cccceeEEEEECCCC---HHHHHhcCC
Confidence 33555667766 999999999999998887 3577 888877643 344455554
No 210
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.02 E-value=0.00019 Score=64.67 Aligned_cols=48 Identities=8% Similarity=0.123 Sum_probs=38.3
Q ss_pred cCCCeEEEEEEcCCCCHhhHHHHHH-------HHHhHHHHHhCCCEEEEEecCCHH
Q 025441 94 WKDRKAVVAFARHFGCVLCRKRADY-------LAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 94 ~~~~~vVLvF~R~~~Cp~C~~el~~-------L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
....+.+|+.|++.||+ |+..++. +.+...+++..++.++.|.++...
T Consensus 25 i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~ 79 (350)
T 1sji_A 25 LKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEA 79 (350)
T ss_dssp HTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTH
T ss_pred HhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCH
Confidence 34556788888999999 9888888 777777777778999999988653
No 211
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.01 E-value=0.0007 Score=63.25 Aligned_cols=45 Identities=9% Similarity=0.136 Sum_probs=37.3
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhC-CCEEEEEecCC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGS 140 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~-Gv~vVaVs~d~ 140 (252)
.++.||+.|++.||++|+..++.|.++..++.+. ++.++.|..+.
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~ 414 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA 414 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc
Confidence 3567888889999999999999999999888765 67777777654
No 212
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=96.95 E-value=0.0006 Score=59.46 Aligned_cols=41 Identities=15% Similarity=0.047 Sum_probs=35.0
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
++.||+.|++.||++|+...+.|.++..++. ++.++.|..+
T Consensus 133 ~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d 173 (245)
T 1a0r_P 133 ITTIVVHIYEDGIKGCDALNSSLICLAAEYP--MVKFCKIKAS 173 (245)
T ss_dssp TCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHH
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence 5678888899999999999999999888764 5888888765
No 213
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=96.93 E-value=0.0011 Score=59.59 Aligned_cols=45 Identities=11% Similarity=0.156 Sum_probs=35.5
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhC-CCEEEEEecC
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPG 139 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~-Gv~vVaVs~d 139 (252)
..++.+|+.|++.||++|+..++.|.++..++++. ++.++.|..+
T Consensus 265 ~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~ 310 (361)
T 3uem_A 265 DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST 310 (361)
T ss_dssp CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT
T ss_pred cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECC
Confidence 34567888889999999999999999999888765 4556655544
No 214
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.88 E-value=0.0021 Score=49.70 Aligned_cols=43 Identities=9% Similarity=0.019 Sum_probs=30.8
Q ss_pred ccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec
Q 025441 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 93 l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~ 138 (252)
+.+..+.+|+||.++||++|+.-.+.|++..++ .++.++-|-.
T Consensus 20 ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~---~~v~~~~vdV 62 (112)
T 3iv4_A 20 VIEENKYVFVLKHSETCPISANAYDQFNKFLYE---RDMDGYYLIV 62 (112)
T ss_dssp HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH---HTCCEEEEEG
T ss_pred HHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc---CCceEEEEEe
Confidence 333467789999999999999999999886652 3344444433
No 215
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=96.82 E-value=0.0011 Score=62.00 Aligned_cols=53 Identities=9% Similarity=-0.027 Sum_probs=42.5
Q ss_pred eEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
+.+|+.|++.||++|+...+.+.++..++... +.++.|.++... ..++++++.
T Consensus 22 ~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~---~l~~~~~v~ 74 (481)
T 3f8u_A 22 GLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANT---NTCNKYGVS 74 (481)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCH---HHHHHTTCC
T ss_pred CeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCH---HHHHhcCCC
Confidence 77888889999999999999999999888665 888889888643 344555653
No 216
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=96.78 E-value=0.0011 Score=49.40 Aligned_cols=57 Identities=14% Similarity=0.053 Sum_probs=34.1
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH-H-HHHHHHHHcCC-cceee
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-E-QARTFSEQTKF-KGEVY 158 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~-~-~~~~f~~~~~l-~fpll 158 (252)
++++ |++ |++.|||+|+...+.|.++..+ +.++-|..+.. . ....+.+++++ .+|.+
T Consensus 18 ~~~~-vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~ 77 (116)
T 2e7p_A 18 SSAP-VVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDELSDGSQLQSALAHWTGRGTVPNV 77 (116)
T ss_dssp TSSS-EEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred cCCC-EEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCCCChHHHHHHHHHHhCCCCcCEE
Confidence 3444 444 7899999999998887765322 34555554432 1 22345566665 35633
No 217
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.74 E-value=0.0011 Score=53.26 Aligned_cols=54 Identities=4% Similarity=-0.069 Sum_probs=39.2
Q ss_pred CCeEEEEEEcCCC--CHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 96 DRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vVLvF~R~~~--Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
++++ |+|||+.| |+.|+...+-|.++.+++....++++-|..| ...+.++++++
T Consensus 34 ~~~v-lVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD---e~~~lA~~ygV 89 (140)
T 2qgv_A 34 APDG-VVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE---QSEAIGDRFGA 89 (140)
T ss_dssp CSSE-EEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH---HHHHHHHHHTC
T ss_pred CCCE-EEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC---CCHHHHHHcCC
Confidence 3454 55999999 9999999999999888875433777777666 34445556564
No 218
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.73 E-value=0.0035 Score=43.72 Aligned_cols=53 Identities=17% Similarity=0.264 Sum_probs=35.0
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC-cceeeec
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF-KGEVYAD 160 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l-~fpllsD 160 (252)
|++|...|||+|++..+.|. +.|+.+..|..+......+..++++. ..|.+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~-------~~~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~~ 56 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAME-------NRGFDFEMINVDRVPEAAEALRAQGFRQLPVVIA 56 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTCHHHHHHHHHTTCCSSCEEEE
T ss_pred EEEEcCCCChhHHHHHHHHH-------HCCCCeEEEECCCCHHHHHHHHHhCCCccCEEEE
Confidence 45678999999998766554 46788888888754444444444564 3675443
No 219
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.70 E-value=0.0023 Score=63.57 Aligned_cols=48 Identities=8% Similarity=-0.121 Sum_probs=38.9
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~ 144 (252)
.++.+++.|++.||+.|+.+++.|.++..+++. .+.++.|..+....+
T Consensus 454 ~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~~ 501 (780)
T 3apo_A 454 DKEPWLVDFFAPWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEGL 501 (780)
T ss_dssp CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHH
T ss_pred CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHHH
Confidence 345677778999999999999999999988864 588999988765443
No 220
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=96.68 E-value=0.0022 Score=49.43 Aligned_cols=40 Identities=13% Similarity=-0.009 Sum_probs=33.3
Q ss_pred EEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC
Q 025441 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 99 vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
.||+.|++.||++|+...+.|.++.+++. ++.++-|..+.
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~ 64 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNS 64 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGG
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHH
Confidence 77888899999999999999999887763 57888777663
No 221
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.68 E-value=0.0012 Score=65.61 Aligned_cols=46 Identities=7% Similarity=-0.176 Sum_probs=37.9
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
.++.+|+.|++.||++|+..++.+.++..+++. ++.++.|..+...
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~~ 719 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAYP 719 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCCH
Confidence 455677777899999999999999999888754 6889999887644
No 222
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.64 E-value=0.0018 Score=45.55 Aligned_cols=56 Identities=7% Similarity=0.097 Sum_probs=38.3
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHH-HHHHHHHHcC---Ccceee
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE-QARTFSEQTK---FKGEVY 158 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~-~~~~f~~~~~---l~fpll 158 (252)
|+.|...|||+|+...+.|.++..+ ..|+.+..|..+... ...++.++++ ..+|.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~--~~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i 62 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNE--RDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI 62 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHH--HSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhc--CCCceEEEEecccChHHHHHHHHHhCCCCceeCeE
Confidence 5567899999999999888886654 357888888765321 1235666666 456743
No 223
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.64 E-value=0.00077 Score=55.19 Aligned_cols=42 Identities=17% Similarity=0.070 Sum_probs=31.8
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~ 138 (252)
++++.|+.|+.+|||+|....+.|.++.+++.. .+.+..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 467888888999999999999999887766532 456655543
No 224
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.61 E-value=0.0018 Score=48.16 Aligned_cols=67 Identities=21% Similarity=0.204 Sum_probs=40.8
Q ss_pred eEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCccee-eec
Q 025441 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEV-YAD 160 (252)
Q Consensus 87 ~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpl-lsD 160 (252)
.-.|.+.....+ +|++|.+.|||+|+.-.+.|.++. .++.+.-|..++.+ ..++.++++...|+ +.|
T Consensus 6 ~~~l~~~~~~~~-~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~~~~-~~el~~~~g~~vP~l~~~ 73 (100)
T 1wjk_A 6 SGNLSASNRALP-VLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDITLPE-NSTWYERYKFDIPVFHLN 73 (100)
T ss_dssp CCCCCCSCCCCC-EEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETTSST-THHHHHHSSSSCSEEEES
T ss_pred chhhhhccCCCC-EEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECCCcc-hHHHHHHHCCCCCEEEEC
Confidence 333444333334 455568999999998777765432 34888888887322 24556666655664 444
No 225
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=96.59 E-value=0.0043 Score=49.51 Aligned_cols=53 Identities=13% Similarity=0.029 Sum_probs=40.0
Q ss_pred CeEEEEEEcCCCC--HhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 97 RKAVVAFARHFGC--VLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 97 ~~vVLvF~R~~~C--p~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
+..||++||+.|| ++|+...+-|.++.+++.. .++++-|..|... +..+++++
T Consensus 33 ~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~~---~la~~ygV 87 (137)
T 2qsi_A 33 GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAER---GLMARFGV 87 (137)
T ss_dssp SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGHH---HHHHHHTC
T ss_pred CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCCH---HHHHHcCC
Confidence 3368899999999 9999999999999888743 4778888777543 34444454
No 226
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=96.59 E-value=0.0014 Score=61.79 Aligned_cols=44 Identities=18% Similarity=0.211 Sum_probs=34.7
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh--CCCEEEEEecC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~--~Gv~vVaVs~d 139 (252)
.++.+|+.|++.||++|+..++.+.++..++.. .++.++.|..+
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~ 420 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHT 420 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGG
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCC
Confidence 345677777899999999999999999888873 35666666654
No 227
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.55 E-value=0.0061 Score=41.54 Aligned_cols=53 Identities=17% Similarity=0.297 Sum_probs=36.2
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC-cceeeec
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF-KGEVYAD 160 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l-~fpllsD 160 (252)
+++|...|||+|+.....|. +.|+.+..|..+......++.+++++ ..|.+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~-------~~~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~ 56 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALD-------RAGLAYNTVDISLDDEARDYVMALGYVQAPVVEV 56 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE
T ss_pred EEEEeCCCChHHHHHHHHHH-------HcCCCcEEEECCCCHHHHHHHHHcCCCccCEEEE
Confidence 45678999999998776654 45778777877754444444456664 4776655
No 228
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=96.53 E-value=0.0053 Score=50.10 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=31.5
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs 137 (252)
+++++|+.|+.+|||+|+...+.|.++.+++.+ ++.+.-+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p 64 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLP 64 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEe
Confidence 568889999999999999999998877666543 45555443
No 229
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=96.50 E-value=0.0086 Score=49.73 Aligned_cols=55 Identities=16% Similarity=0.245 Sum_probs=38.9
Q ss_pred CeEEEEEEcC-------CCCHhhHHHHHHHHHhHHHHHh----CCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 97 RKAVVAFARH-------FGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 97 ~~vVLvF~R~-------~~Cp~C~~el~~L~~~~~~~~~----~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
...|||+|++ .||++|+...+.|.++..++.. ..+.+.-|..|.. .+.++++++.
T Consensus 37 ~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~---~~la~~~~I~ 102 (178)
T 3ga4_A 37 GYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEV---PQLVKDLKLQ 102 (178)
T ss_dssp TCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTC---HHHHHHTTCC
T ss_pred CCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccC---HHHHHHcCCC
Confidence 3467777888 5999999999999999888863 3466666666653 3344555653
No 230
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.50 E-value=0.0022 Score=45.06 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=25.9
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
+++|++.|||+|+...+.|.++. ++.|+.+..+..+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~---~~~~~~~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAI---DPSKYTVEIVHLG 39 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHS---CTTTEEEEEEETT
T ss_pred eEEEeCCCCCchHHHHHHHHHHH---HhcCCeEEEEEec
Confidence 45567999999999999887654 3456666555554
No 231
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.50 E-value=0.0016 Score=55.44 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=32.8
Q ss_pred eEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC
Q 025441 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d 139 (252)
+.||+.|++.||+.|+...+.|.++..++. ++.++.|..+
T Consensus 121 k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~ 160 (217)
T 2trc_P 121 TTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS 160 (217)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH
T ss_pred cEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC
Confidence 577777889999999999999998877763 6788877754
No 232
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.46 E-value=0.004 Score=47.50 Aligned_cols=54 Identities=19% Similarity=0.184 Sum_probs=37.8
Q ss_pred EEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcceee
Q 025441 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVY 158 (252)
Q Consensus 99 vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpll 158 (252)
..|+.|++.||++|+.-.+.|.++.++ .|+.+.-|..+.... ..+++++..|.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e---~~i~~~~vDId~d~~---l~~~ygv~VP~l 83 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKK---SWFELEVINIDGNEH---LTRLYNDRVPVL 83 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHH---SCCCCEEEETTTCHH---HHHHSTTSCSEE
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHh---cCCeEEEEECCCCHH---HHHHhCCCCceE
Confidence 346777899999999998888777654 468888888764322 334556667754
No 233
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.38 E-value=0.0049 Score=50.09 Aligned_cols=41 Identities=20% Similarity=0.161 Sum_probs=31.0
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs 137 (252)
++++.|+.|..++||+|....+.|.++.+++.. .+.+..+.
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p 64 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVP 64 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEE
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeC
Confidence 457788888999999999999999877666532 45655454
No 234
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.13 E-value=0.01 Score=49.23 Aligned_cols=55 Identities=5% Similarity=0.176 Sum_probs=40.0
Q ss_pred CCeEEEEEEcCC-CCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 96 DRKAVVAFARHF-GCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vVLvF~R~~-~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
+++++|++|++. ||++|+...+.|.++.+. ...+.++.|..+.++. .+.++++++
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~--~~~v~~~~vd~~~~~~-~~~~~~~~v 76 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL--TDKLSYEIVDFDTPEG-KELAKRYRI 76 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT--CTTEEEEEEETTSHHH-HHHHHHTTC
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh--CCceEEEEEeCCCccc-HHHHHHcCC
Confidence 468888889999 999999999988886543 2358888888886322 344555554
No 235
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.03 E-value=0.014 Score=46.71 Aligned_cols=50 Identities=14% Similarity=0.065 Sum_probs=38.2
Q ss_pred eEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhC-CCEEEEEec
Q 025441 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGP 138 (252)
Q Consensus 87 ~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~-Gv~vVaVs~ 138 (252)
.+.+++- +.|+.|+.|..++||+|....+.+.+..+++.+. .++++.+..
T Consensus 19 ~~~~G~~--~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 19 GLHIGES--NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp SEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CcccCCC--CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 3555654 6788899999999999999999998887776444 477776553
No 236
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=95.98 E-value=0.0087 Score=54.36 Aligned_cols=56 Identities=11% Similarity=0.064 Sum_probs=38.3
Q ss_pred CCCeEEEEEEcCCCCHhhHHHH------HHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 95 KDRKAVVAFARHFGCVLCRKRA------DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el------~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
...+.+||.|++.||++|+..- +.+.+...+++..++.+..|.++.... .++++++
T Consensus 28 ~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~---l~~~~~V 89 (367)
T 3us3_A 28 KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAA---VAKKLGL 89 (367)
T ss_dssp HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHH---HHHHHTC
T ss_pred hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHH---HHHHcCC
Confidence 3456788888999999984322 366666777766678999998886533 3444444
No 237
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=95.94 E-value=0.013 Score=48.75 Aligned_cols=56 Identities=7% Similarity=0.013 Sum_probs=41.3
Q ss_pred CCeEEEEEE----cCCCCHhhHHHHHHHHHhHHHHHh-CCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 96 DRKAVVAFA----RHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 96 ~~~vVLvF~----R~~~Cp~C~~el~~L~~~~~~~~~-~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
.+|++|+|| |+.||+.|+..++++.++..++.. ..+.++.|.++.. .+.++++++.
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~---~~l~~~~~v~ 80 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTH---KEETEKYGVD 80 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTC---HHHHHHTTCC
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCccc---HHHHHHcCCC
Confidence 578999999 788999999999999998777653 3477878877643 3344555543
No 238
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=95.94 E-value=0.0075 Score=43.94 Aligned_cols=49 Identities=12% Similarity=0.187 Sum_probs=31.0
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCE-EEEEecCCHHHHHHHHHHcCCcceeee
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQARTFSEQTKFKGEVYA 159 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~-vVaVs~d~~~~~~~f~~~~~l~fplls 159 (252)
|+.|++.||++|+.-.+.|.+. +.. ..-|..+.... ..+++++..|++.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~-------~~~~~~~vdid~~~~---l~~~~g~~vPtl~ 52 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQA-------RAGAFFSVFIDDDAA---LESAYGLRVPVLR 52 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-------TCCCEEEEECTTCHH---HHHHHTTTCSEEE
T ss_pred EEEEECCCCchHHHHHHHHHHH-------HHhheEEEECCCCHH---HHHHhCCCcCeEE
Confidence 5678899999999877776543 333 45566654322 3345566677544
No 239
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=95.78 E-value=0.0089 Score=50.17 Aligned_cols=38 Identities=18% Similarity=0.333 Sum_probs=29.6
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs 137 (252)
+++++|+.|..+|||+|++..+.|.++. +.|+.++.+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~----~~~v~v~~~~ 122 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYN----DLGITVRYLA 122 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHH----HTTEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHH----hCCcEEEEEE
Confidence 4578888889999999999999887743 3478877653
No 240
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.29 E-value=0.047 Score=38.75 Aligned_cols=51 Identities=14% Similarity=0.214 Sum_probs=35.0
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHc-CC-cceeee
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT-KF-KGEVYA 159 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~-~l-~fplls 159 (252)
|++|...|||+|++....|. +.|+....|..+ .+...++.+.+ +. .+|.+.
T Consensus 8 v~~y~~~~C~~C~~~~~~L~-------~~~i~~~~vdv~-~~~~~~l~~~~~~~~~vP~l~ 60 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLD-------KKGVKYTDIDAS-TSLRQEMVQRANGRNTFPQIF 60 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHH-------HHTCCEEEECSC-HHHHHHHHHHHHSSCCSCEEE
T ss_pred EEEEECCCChhHHHHHHHHH-------HcCCCcEEEECC-HHHHHHHHHHhCCCCCcCEEE
Confidence 55678999999997665554 456777777777 55556677766 54 467543
No 241
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=95.22 E-value=0.031 Score=42.55 Aligned_cols=54 Identities=9% Similarity=0.207 Sum_probs=32.3
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCC---CEEEEEecCCH----HHHHHHHHHcCC-cce-eeec
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASG---VALVLIGPGSV----EQARTFSEQTKF-KGE-VYAD 160 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~G---v~vVaVs~d~~----~~~~~f~~~~~l-~fp-llsD 160 (252)
|++|...|||+|++- +.+.|++.| +.+..|..+.. +..++..+.++. ++| ++.|
T Consensus 27 Vvvf~~~~Cp~C~~a------lk~~L~~~~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~vfi~ 89 (118)
T 3c1r_A 27 IFVASKTYCPYCHAA------LNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYIN 89 (118)
T ss_dssp EEEEECSSCHHHHHH------HHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEET
T ss_pred EEEEEcCCCcCHHHH------HHHHHHHcCCCCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEEEEC
Confidence 444788999999976 123345556 77777766532 233455566665 466 4444
No 242
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=95.08 E-value=0.055 Score=41.57 Aligned_cols=66 Identities=17% Similarity=0.160 Sum_probs=53.4
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec----CCHHHHHHHHHHcCCcceeeecCChHHHHHcCCcc
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~----d~~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~ 173 (252)
+.+|-..+|+.|++...-| ++.|+..-.+.. .+.+.++++.+..+++..-+.+.....|+.+++..
T Consensus 2 i~iY~~~~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~~ 71 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWL-------NRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDV 71 (120)
T ss_dssp EEEEECSSCHHHHHHHHHH-------HHTTCCEEEEETTTSCCCHHHHHHHHHHCSSTHHHHBCTTCHHHHHTTCCG
T ss_pred EEEEeCCCCHHHHHHHHHH-------HHcCCCeEEEecccCCCcHHHHHHHHhhcCCCHHHhhcCCcHHHHHcCCCc
Confidence 5678899999999776654 667887777654 24578999999989998888889999999999753
No 243
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=95.04 E-value=0.01 Score=45.84 Aligned_cols=27 Identities=15% Similarity=0.354 Sum_probs=19.9
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhH
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKK 123 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~ 123 (252)
...+||.|++.||++|+..-+++...+
T Consensus 18 ~~~~LV~F~A~wC~~Ck~~~~~i~~~~ 44 (116)
T 3dml_A 18 AELRLLMFEQPGCLYCARWDAEIAPQY 44 (116)
T ss_dssp -CEEEEEEECTTCHHHHHHHHHTTTTG
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHhhH
Confidence 356777888999999998776655443
No 244
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=95.02 E-value=0.042 Score=41.00 Aligned_cols=53 Identities=15% Similarity=0.179 Sum_probs=30.1
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC----HHHHHH-HHHHcCC-cce-eeec
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQART-FSEQTKF-KGE-VYAD 160 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~----~~~~~~-f~~~~~l-~fp-llsD 160 (252)
|++|...|||+|++-..-|. +.|+..-.|..+. ...+++ +.+..+. ++| ++.|
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~-------~~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ifi~ 80 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFK-------RLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFVC 80 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEEET
T ss_pred EEEEECCCChhHHHHHHHHH-------HcCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEEEC
Confidence 44467899999997665554 4565544454442 234444 4344454 466 4444
No 245
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=94.91 E-value=0.088 Score=42.28 Aligned_cols=64 Identities=16% Similarity=0.144 Sum_probs=42.5
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHH---HHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcC---CcceeeecCC
Q 025441 97 RKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPN 162 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~---l~fpllsDp~ 162 (252)
++.|++.|.+.||+.|+..-.+. .++.+.+ +.+..+|-|..++.+ ..++.++++ +|+-++.|++
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l-~~~fv~v~~d~~~~~-~~~l~~~y~v~~~P~~~fld~~ 111 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNII-REHFIFWQVYHDSEE-GQRYIQFYKLGDFPYVSILDPR 111 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHH-HHTEEEEEEESSSHH-HHHHHHHHTCCSSSEEEEECTT
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHH-HcCeEEEEEecCCHh-HHHHHHHcCCCCCCEEEEEeCC
Confidence 56677777899999999876554 2233333 336777777777653 345666655 5556888997
No 246
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=94.81 E-value=0.093 Score=39.07 Aligned_cols=59 Identities=14% Similarity=0.213 Sum_probs=37.8
Q ss_pred cCCCeEEEEEEcC----CCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH-HHHHHHHHHcCC-cce-eeec
Q 025441 94 WKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQTKF-KGE-VYAD 160 (252)
Q Consensus 94 ~~~~~vVLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~-~~~~~f~~~~~l-~fp-llsD 160 (252)
....+ |++|..+ .|||+|++-..-| ++.|+....|..+.. +..+++.+..+. ++| |+.|
T Consensus 12 i~~~~-vvvy~~g~~~~~~Cp~C~~ak~~L-------~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~ifi~ 77 (109)
T 1wik_A 12 TNKAS-VMLFMKGNKQEAKCGFSKQILEIL-------NSTGVEYETFDILEDEEVRQGLKTFSNWPTYPQLYVR 77 (109)
T ss_dssp HTTSS-EEEEESSTTTCCCSSTHHHHHHHH-------HHTCSCEEEEESSSCHHHHHHHHHHHSCCSSCEEECS
T ss_pred hccCC-EEEEEecCCCCCCCchHHHHHHHH-------HHcCCCeEEEECCCCHHHHHHHHHHhCCCCCCEEEEC
Confidence 33444 5667776 8999999766655 456888888877643 444455555564 466 4444
No 247
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=94.78 E-value=0.048 Score=46.57 Aligned_cols=46 Identities=15% Similarity=0.037 Sum_probs=32.8
Q ss_pred eEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe
Q 025441 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 87 ~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs 137 (252)
.+.++.- +.|++|+.|..+|||+|++..+.|.++.+. .++.++.+.
T Consensus 89 ~i~~G~~--~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~ 134 (241)
T 1v58_A 89 WLLDGKK--DAPVIVYVFADPFCPYCKQFWQQARPWVDS---GKVQLRTLL 134 (241)
T ss_dssp CEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHT---TSEEEEEEE
T ss_pred CceECCC--CCCeEEEEEECCCChhHHHHHHHHHHHHhC---CcEEEEEEE
Confidence 3445543 567888888999999999999988775442 346665543
No 248
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=94.78 E-value=0.074 Score=36.63 Aligned_cols=53 Identities=11% Similarity=0.153 Sum_probs=33.2
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC-HHHHHHHHHHcCC-cceeeec
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGEVYAD 160 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~-~~~~~~f~~~~~l-~fpllsD 160 (252)
|++|...|||+|++-...|.+ .|+.+..|..+. .+...++.+.++. .+|.+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~-------~~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~ 57 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSS-------KGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFI 57 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCCEEEECTTCSHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHH-------CCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE
Confidence 345678999999977666543 466666666554 3445567666664 4675543
No 249
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=94.76 E-value=0.057 Score=39.32 Aligned_cols=51 Identities=18% Similarity=0.167 Sum_probs=29.9
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCE---EEEEecCC----HHHHHHHHHHcCC-cceee
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPGS----VEQARTFSEQTKF-KGEVY 158 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~---vVaVs~d~----~~~~~~f~~~~~l-~fpll 158 (252)
|++|...|||+|+...+.|.+ .++. +..|..+. .+....+.+.++. .+|.+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~-------~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i 72 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQ-------LPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPRV 72 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------SCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE
T ss_pred EEEEEcCCCHhHHHHHHHHHH-------cCCCCCccEEEEccCCCCHHHHHHHHHHHhCCCCcCeE
Confidence 344678999999987666644 4444 55555443 2223345556664 36643
No 250
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=94.69 E-value=0.053 Score=40.66 Aligned_cols=50 Identities=18% Similarity=0.246 Sum_probs=31.2
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCE---EEEEecCCH----HHHHHHHHHcCC-ccee
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPGSV----EQARTFSEQTKF-KGEV 157 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~---vVaVs~d~~----~~~~~f~~~~~l-~fpl 157 (252)
|++|...|||+|++..+.| ++.|+. +..|..+.. +..+++.+.++. .+|.
T Consensus 21 vv~f~~~~Cp~C~~~~~~L-------~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~ 78 (114)
T 2hze_A 21 VTIFVKYTCPFCRNALDIL-------NKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPR 78 (114)
T ss_dssp EEEEECTTCHHHHHHHHHH-------TTSCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCE
T ss_pred EEEEEeCCChhHHHHHHHH-------HHcCCCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCE
Confidence 4456789999999766655 445566 666665432 333456666665 3663
No 251
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.64 E-value=0.04 Score=52.26 Aligned_cols=53 Identities=11% Similarity=0.098 Sum_probs=39.1
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
.++..|.+|++.|||+|+...+.|.++..++. ++.+..|..+... +.++++++
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~~---~~~~~~~i 168 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTFQ---NEITERNV 168 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTCH---HHHHHTTC
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhhH---HHHHHhCC
Confidence 36778899999999999999999988766543 6788888776433 34445454
No 252
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=94.61 E-value=0.08 Score=39.06 Aligned_cols=58 Identities=14% Similarity=0.230 Sum_probs=33.9
Q ss_pred CCCeEEEEEEc----CCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC-HHHHHHHHHHcCC-ccee-eec
Q 025441 95 KDRKAVVAFAR----HFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGEV-YAD 160 (252)
Q Consensus 95 ~~~~vVLvF~R----~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~-~~~~~~f~~~~~l-~fpl-lsD 160 (252)
...+ |++|+. +.|||+|++-.+-|. +.|+....|..+. ++..+++.+.++. .+|. +.|
T Consensus 15 ~~~~-vvvf~~g~~~~~~C~~C~~~~~~L~-------~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~i~ 79 (105)
T 2yan_A 15 NKAS-VMLFMKGNKQEAKCGFSKQILEILN-------STGVEYETFDILEDEEVRQGLKAYSNWPTYPQLYVK 79 (105)
T ss_dssp TSSS-EEEEESBCSSSBCTTHHHHHHHHHH-------HHTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEET
T ss_pred ccCC-EEEEEecCCCCCCCccHHHHHHHHH-------HCCCCeEEEECCCCHHHHHHHHHHHCCCCCCeEEEC
Confidence 3445 555665 389999997665553 4466666666653 3334445555564 4663 444
No 253
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=94.53 E-value=0.034 Score=45.72 Aligned_cols=42 Identities=14% Similarity=0.059 Sum_probs=30.9
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~ 138 (252)
.++++|+.|..+|||+|+...+.|.++.+++.+ .+.+.-+..
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecC
Confidence 357888888999999999999988777665544 454444443
No 254
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=94.49 E-value=0.13 Score=36.43 Aligned_cols=47 Identities=9% Similarity=0.030 Sum_probs=31.0
Q ss_pred EEEEcCC----CCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC------CHHHHHHHHHHcCCc
Q 025441 101 VAFARHF----GCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SVEQARTFSEQTKFK 154 (252)
Q Consensus 101 LvF~R~~----~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d------~~~~~~~f~~~~~l~ 154 (252)
|++|... |||+|++-..- |++.|+..-.|..+ +.+..+++.+..+..
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~-------L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~ 58 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRL-------LTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRD 58 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHH-------HHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCS
T ss_pred EEEEEeCCCCCcCccHHHHHHH-------HHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCC
Confidence 3455678 99999865554 45567777777666 345556676666654
No 255
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=94.42 E-value=0.12 Score=40.25 Aligned_cols=66 Identities=15% Similarity=0.242 Sum_probs=51.6
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC----CHHHHHHHHHHcCCcceeeecCChHHHHHcCCcc
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d----~~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~ 173 (252)
|.+|...+|+.|++-..-| ++.|+..-.+..+ +.+.++++.++.+.+..-+.+.....|+.+++..
T Consensus 3 i~lY~~~~C~~C~ka~~~L-------~~~gi~y~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~~ 72 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWL-------EEHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNV 72 (132)
T ss_dssp EEEEECTTCHHHHHHHHHH-------HHTTCCEEEEETTTSCCCHHHHHHHHHTCSSCGGGTBCTTSHHHHHHCCCG
T ss_pred EEEEeCCCChHHHHHHHHH-------HHcCCceEEEEccCCCccHHHHHHHHHHcCCCHHHhhcCCchHHHhcCccc
Confidence 5678899999999766655 4567777666553 2368888888888888888899999999999753
No 256
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=94.42 E-value=0.095 Score=40.33 Aligned_cols=67 Identities=19% Similarity=0.287 Sum_probs=54.1
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec----CCHHHHHHHHHHcCCcceeeecCChHHHHHcCCcc
Q 025441 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 100 VLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~----d~~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~ 173 (252)
++.+|-..+|+.|++...-| ++.|+..-.|.. -+.+.++++.++.|++..-+.+.....|+.+++..
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~~ 74 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAEL-------DDLAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSGQSYRALGLKD 74 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHH-------HHHTCCEEEEETTTSCCCHHHHHHHHHHSCCCGGGGBCTTSHHHHHTTHHH
T ss_pred eEEEEeCCCChHHHHHHHHH-------HHcCCceEEEEeccCchhHHHHHHHHHHcCCCHHHHhCCCCcchhhcCccc
Confidence 57788999999999877655 567777666643 34579999999999998888899999999999754
No 257
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=94.31 E-value=0.093 Score=40.38 Aligned_cols=66 Identities=15% Similarity=0.250 Sum_probs=53.1
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec----CCHHHHHHHHHHcCCcceeeecCChHHHHHcCCcc
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~----d~~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~ 173 (252)
|.+|-..+|+.|++...-| ++.|+..-.|.. .+.+.++++.++.|++..-+.+.....|+.+|+..
T Consensus 6 i~iY~~p~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~~ 75 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWL-------IENNIEYTNRLIVDDNPTVEELKAWIPLSGLPVKKFFNTSGVVYKELKLSS 75 (120)
T ss_dssp CEEEECTTCHHHHHHHHHH-------HHTTCCCEEEETTTTCCCHHHHHHHHHHHTSCGGGGBCTTSHHHHHTTHHH
T ss_pred EEEEECCCChHHHHHHHHH-------HHcCCceEEEecccCcCCHHHHHHHHHHcCCCHHHeEeCCCchhhhcCcch
Confidence 6678899999999877665 567777666643 34579999999999998888899999999999753
No 258
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=94.30 E-value=0.11 Score=39.93 Aligned_cols=66 Identities=15% Similarity=0.265 Sum_probs=52.5
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec----CCHHHHHHHHHHcCC-cceeeecCChHHHHHcCCcc
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKF-KGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~----d~~~~~~~f~~~~~l-~fpllsDp~~~ly~alGv~~ 173 (252)
|.+|-..+|+.|++...-| ++.|+..-.|.. -+.+.++.+.+..|+ +..=+.+.....|+.+++..
T Consensus 7 i~iY~~p~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 77 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALV-------EQQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDD 77 (121)
T ss_dssp CEEECCTTCHHHHHHHHHH-------HTTTCCCEEECTTTSCCCHHHHHHHHHHTTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCCHHHHHHHHHH-------HHcCCCcEEEeeccCCCcHHHHHHHHHhcCCcCHHHHhcCCChhhhhcCccc
Confidence 6688899999999776655 567777666643 345899999999998 77667889999999999864
No 259
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=94.25 E-value=0.14 Score=36.31 Aligned_cols=52 Identities=17% Similarity=0.209 Sum_probs=33.8
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC-HHHHHHHHHHcCC-cceeee
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGEVYA 159 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~-~~~~~~f~~~~~l-~fplls 159 (252)
|+.|...|||+|++-...| ++.|+.+..|..+. .+...++.+.++. ..|.+.
T Consensus 8 v~ly~~~~C~~C~~~~~~L-------~~~~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~ 61 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALL-------ARKGAEFNEIDASATPELRAEMQERSGRNTFPQIF 61 (92)
T ss_dssp EEEEECTTCHHHHHHHHHH-------HHTTCCCEEEESTTSHHHHHHHHHHHTSSCCCEEE
T ss_pred EEEEECCCChhHHHHHHHH-------HHcCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE
Confidence 4556789999999765554 45577777777764 3445567666663 356443
No 260
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.23 E-value=0.092 Score=40.50 Aligned_cols=48 Identities=8% Similarity=0.088 Sum_probs=30.4
Q ss_pred EcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH----HHHHHHHHHcCCc-ceee
Q 025441 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV----EQARTFSEQTKFK-GEVY 158 (252)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~----~~~~~f~~~~~l~-fpll 158 (252)
|...|||+|+...+.|.+ .|+....|..+.. +..+++.+.++.. +|.+
T Consensus 32 f~~~~Cp~C~~~~~~L~~-------~~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l 84 (130)
T 2cq9_A 32 FSKTSCSYCTMAKKLFHD-------MNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRI 84 (130)
T ss_dssp EECSSCSHHHHHHHHHHH-------HTCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEE
T ss_pred EEcCCChHHHHHHHHHHH-------cCCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEE
Confidence 688999999987666544 3555556665532 3334566666753 6744
No 261
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=94.07 E-value=0.085 Score=40.87 Aligned_cols=53 Identities=15% Similarity=0.241 Sum_probs=30.8
Q ss_pred EEEEcCCCCHhhHHH-HHHHHHhHHHHHhCC---CEEEEEecCCH----HHHHHHHHHcCC-cce-eeec
Q 025441 101 VAFARHFGCVLCRKR-ADYLAAKKDVMDASG---VALVLIGPGSV----EQARTFSEQTKF-KGE-VYAD 160 (252)
Q Consensus 101 LvF~R~~~Cp~C~~e-l~~L~~~~~~~~~~G---v~vVaVs~d~~----~~~~~f~~~~~l-~fp-llsD 160 (252)
|++|...|||+|++- ...| ++.| +....|..+.. +..++..+.++. ++| |+.|
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L-------~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~vfi~ 101 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLF-------QELNVPKSKALVLELDEMSNGSEIQDALEEISGQKTVPNVYIN 101 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------TTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEET
T ss_pred EEEEECCCCCchHHHHHHHH-------HhcCccCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEEEEC
Confidence 345678999999976 4443 4455 55555554421 233456666665 467 4444
No 262
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=94.02 E-value=0.13 Score=39.42 Aligned_cols=66 Identities=20% Similarity=0.268 Sum_probs=53.1
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe----cCCHHHHHHHHHHcCCc-ceeeecCChHHHHHcCCcc
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG----PGSVEQARTFSEQTKFK-GEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs----~d~~~~~~~f~~~~~l~-fpllsDp~~~ly~alGv~~ 173 (252)
+.+|-..+|+.|++...-| ++.|+..-.|. +-+.+.++.+.++.|++ ..-+.+.....|+.+++..
T Consensus 6 i~iY~~p~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~t~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 76 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALL-------ENQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGD 76 (119)
T ss_dssp CEEECCTTCHHHHHHHHHH-------HHTTCCCEEECHHHHCCCHHHHHHHHHHHTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCChHHHHHHHHH-------HHcCCceEEEEeccCcCcHHHHHHHHHHcCCccHHHHhcCCCchhhhcCccc
Confidence 5688899999999877665 56777665553 34568999999999998 7778889999999999865
No 263
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=93.81 E-value=0.13 Score=36.52 Aligned_cols=53 Identities=17% Similarity=0.203 Sum_probs=32.6
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC--CHH----HHHHHHHHcCC-cceeeec
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--SVE----QARTFSEQTKF-KGEVYAD 160 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d--~~~----~~~~f~~~~~l-~fpllsD 160 (252)
|.+|...|||+|++-...|.+ .|+..-.|..+ +.+ ...++.+.++. ..|++.+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~-------~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~ 73 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKR-------EGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK 73 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHH-------HTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE
Confidence 455688999999986665544 34444444433 332 23667777774 5786665
No 264
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=93.72 E-value=0.16 Score=37.40 Aligned_cols=53 Identities=13% Similarity=0.214 Sum_probs=32.6
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH-HHHHHHHHHc-CC-cce-eeec
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQT-KF-KGE-VYAD 160 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~-~~~~~f~~~~-~l-~fp-llsD 160 (252)
|+.|...|||+|++-..-|. +.|+....|..+.. +..+++.+.. +. .+| ++.|
T Consensus 18 v~vy~~~~Cp~C~~ak~~L~-------~~~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi~ 74 (99)
T 3qmx_A 18 IEIYTWSTCPFCMRALALLK-------RKGVEFQEYCIDGDNEAREAMAARANGKRSLPQIFID 74 (99)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HHTCCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEET
T ss_pred EEEEEcCCChhHHHHHHHHH-------HCCCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEEC
Confidence 44578999999998776664 34666666666544 3344455554 43 466 4444
No 265
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=93.63 E-value=0.13 Score=40.80 Aligned_cols=67 Identities=13% Similarity=0.123 Sum_probs=53.2
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC----CHHHHHHHHHHcCCcceeeecCChHHHHHcCCccc
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d----~~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~ 174 (252)
|.+|-..+|+.|++...-| +++|+..-.|... +.+.++++.++.+++..-+.+.....|+.+++...
T Consensus 4 itiY~~p~C~~crkak~~L-------~~~gi~~~~idi~~~~~~~~eL~~~~~~~g~p~~~l~n~~~~~yk~l~l~~~ 74 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMI-------RNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAED 74 (141)
T ss_dssp CEEECCTTCHHHHHHHHHH-------HHTTCCCEEECTTTSCCCHHHHHHHHHHHTSCHHHHBCSSSHHHHHTTTTSS
T ss_pred EEEEECCCChHHHHHHHHH-------HHcCCCEEEEECCCCCccHHHHHHHhcccCCCHHHhccCCchhHHhcCCccc
Confidence 5578899999999766654 6678776666553 35788999999999987777999999999998653
No 266
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=93.60 E-value=0.12 Score=40.90 Aligned_cols=48 Identities=8% Similarity=0.060 Sum_probs=29.7
Q ss_pred EcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC----HHHHHHHHHHcCCc-ceee
Q 025441 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQARTFSEQTKFK-GEVY 158 (252)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~----~~~~~~f~~~~~l~-fpll 158 (252)
|...|||+|+...+.|.+ .|+....|..+. .+..+++.+.++.. +|.+
T Consensus 54 f~~~~Cp~C~~~k~~L~~-------~~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~i 106 (146)
T 2ht9_A 54 FSKTSCSYCTMAKKLFHD-------MNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRI 106 (146)
T ss_dssp EECTTCHHHHHHHHHHHH-------HTCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEE
T ss_pred EECCCChhHHHHHHHHHH-------cCCCeEEEECccCcCCHHHHHHHHHHhCCCCcCeE
Confidence 788999999987666654 345555555442 23334566676753 6744
No 267
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=93.56 E-value=0.21 Score=34.71 Aligned_cols=53 Identities=11% Similarity=0.040 Sum_probs=32.7
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH---HHHHHHHHHcCC------cceeeec
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKF------KGEVYAD 160 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~---~~~~~f~~~~~l------~fpllsD 160 (252)
|++|...|||+|++-..-| ++.|+..-.+..+.. ....++.+.++. ..|.+..
T Consensus 6 v~ly~~~~Cp~C~~~~~~L-------~~~~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i 67 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWF-------EENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI 67 (89)
T ss_dssp EEEEECTTCHHHHHHHHHH-------HHTTCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE
T ss_pred EEEEEcCCChhHHHHHHHH-------HHcCCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE
Confidence 6677889999999765544 455655444444332 234567777776 5775443
No 268
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=93.40 E-value=0.79 Score=44.84 Aligned_cols=55 Identities=16% Similarity=0.065 Sum_probs=36.9
Q ss_pred CccccCCCCCcEEec-CCCCeEeCCCccC--CCeEEEEEEcCCCCHhhHHHHHHHHHh
Q 025441 68 SEDTKNLLDTVKVYD-VNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAK 122 (252)
Q Consensus 68 ~~~~g~~apdf~L~d-~~G~~v~ls~l~~--~~~vVLvF~R~~~Cp~C~~el~~L~~~ 122 (252)
...+|..+|++.|.. .+|+++.+.+++. ++.+||+|--..-.+.+...+..+.+.
T Consensus 478 ~~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~ 535 (665)
T 1pn0_A 478 NCVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGKATDATQMSRIKKFAAY 535 (665)
T ss_dssp TSCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEECTTSHHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCCcccchhHHHHHHHHHH
Confidence 356899999999976 4899999999885 456677664333234455555555443
No 269
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=93.38 E-value=0.053 Score=44.43 Aligned_cols=41 Identities=29% Similarity=0.410 Sum_probs=27.3
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHH---HHhHHHHHhCCCEEEEEec
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~Gv~vVaVs~ 138 (252)
.+|+|+.|| .+|||+|+...+.+ .++.+++.+ ++.++-+..
T Consensus 14 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 57 (189)
T 3l9v_A 14 DAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHV 57 (189)
T ss_dssp TCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEEC
T ss_pred CCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEec
Confidence 456777665 89999999988876 334333322 577776654
No 270
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=93.30 E-value=0.17 Score=39.73 Aligned_cols=55 Identities=9% Similarity=0.202 Sum_probs=35.0
Q ss_pred EEEEEcC----CCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC-CHHHHHHHHHHcCC-cce-eeecC
Q 025441 100 VVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKF-KGE-VYADP 161 (252)
Q Consensus 100 VLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d-~~~~~~~f~~~~~l-~fp-llsDp 161 (252)
|++|..+ .|||+|++-..-| ++.|+....|..+ +++..+++.+..+. ++| |+.|-
T Consensus 37 Vvvy~ks~~~~~~Cp~C~~ak~~L-------~~~gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~VfI~G 98 (135)
T 2wci_A 37 ILLYMKGSPKLPSCGFSAQAVQAL-------AACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDG 98 (135)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHH-------HTTCSCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred EEEEEEecCCCCCCccHHHHHHHH-------HHcCCceEEEECCCCHHHHHHHHHHHCCCCcCEEEECC
Confidence 5667776 8999999766555 4557776666664 34444555555554 467 56653
No 271
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=93.18 E-value=0.2 Score=38.39 Aligned_cols=56 Identities=16% Similarity=0.155 Sum_probs=33.1
Q ss_pred EEEEEEcC----CCCHhhHHHHHHHHHhHHHHHhCCCE-EEEEecCCHHHH-HHHHHHcC-Ccce-eeecC
Q 025441 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQA-RTFSEQTK-FKGE-VYADP 161 (252)
Q Consensus 99 vVLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~Gv~-vVaVs~d~~~~~-~~f~~~~~-l~fp-llsDp 161 (252)
-|++|-.. .|||+|.+-..-| ++.|+. ...|..+..+.+ +.+.+..+ -++| |+.|-
T Consensus 21 ~Vvvfsk~t~~~p~Cp~C~~ak~lL-------~~~gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI~g 84 (118)
T 2wem_A 21 KVVVFLKGTPEQPQCGFSNAVVQIL-------RLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNG 84 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHH-------HHTTCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred CEEEEEecCCCCCccHHHHHHHHHH-------HHcCCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEEECC
Confidence 46677776 4999999765555 455663 555555443333 34444434 3477 56663
No 272
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=93.00 E-value=0.027 Score=46.95 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=27.9
Q ss_pred eEEEEEEcCCCCHhhHHHHHHH---HHhHHHHHhCCCEEEEEecC
Q 025441 98 KAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~Gv~vVaVs~d 139 (252)
+++|+-|+.+|||+|+...+.| .++.+++. .++.+.-+..+
T Consensus 114 ~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~-~~v~~~~~~v~ 157 (197)
T 1un2_A 114 APQVLEFFSFFCPHCYQFEEVLHISDNVKKKLP-EGVKMTKYHVN 157 (197)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSC-TTCCEEEEECS
T ss_pred CCEEEEEECCCChhHHHhCcccccHHHHHHHCC-CCCEEEEeccC
Confidence 3566666779999999998877 66555543 35666665543
No 273
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=92.57 E-value=0.14 Score=37.47 Aligned_cols=50 Identities=10% Similarity=0.027 Sum_probs=31.1
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCH-HHHHHHHHHc-C-Cccee
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQT-K-FKGEV 157 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~-~~~~~f~~~~-~-l~fpl 157 (252)
|..|-..|||+|.+--.- |++.|+...-|..+.. +..+.+.+.. | -+.|.
T Consensus 6 I~vYs~~~Cp~C~~aK~~-------L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~ 58 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTA-------LTANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPT 58 (92)
T ss_dssp EEEEECTTCSSHHHHHHH-------HHHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSCE
T ss_pred EEEEcCCCCHhHHHHHHH-------HHhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeCE
Confidence 445678999999964433 4667888777777654 3444444443 3 34663
No 274
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=92.43 E-value=0.067 Score=46.17 Aligned_cols=58 Identities=12% Similarity=0.016 Sum_probs=37.9
Q ss_pred CCCeEEEEEEcC--CCCHhhHHHHHHHHHhHHHHHh-CCCEEEEEecCC--HHHHHHHHHHcCCc---ce
Q 025441 95 KDRKAVVAFARH--FGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGS--VEQARTFSEQTKFK---GE 156 (252)
Q Consensus 95 ~~~~vVLvF~R~--~~Cp~C~~el~~L~~~~~~~~~-~Gv~vVaVs~d~--~~~~~~f~~~~~l~---fp 156 (252)
...+.+||.|++ .||+ ..+.+.++..++.. .++.+..|..++ -.....+++++++. ||
T Consensus 20 ~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~P 85 (240)
T 2qc7_A 20 PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYP 85 (240)
T ss_dssp GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCS
T ss_pred cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCCC
Confidence 344567777788 9999 66677777776654 457888888654 11234456666766 66
No 275
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=92.41 E-value=0.24 Score=37.01 Aligned_cols=55 Identities=15% Similarity=0.129 Sum_probs=33.2
Q ss_pred EEEEEEcC----CCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC-HHHHHHHHHHcCC-cce-eeec
Q 025441 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGE-VYAD 160 (252)
Q Consensus 99 vVLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~-~~~~~~f~~~~~l-~fp-llsD 160 (252)
-|++|-.. .|||+|++-..-| ++.|+..-.|..+. .+..+.+.+..+. ++| |+.|
T Consensus 19 ~Vvvy~k~t~~~p~Cp~C~~ak~~L-------~~~gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi~ 80 (109)
T 3ipz_A 19 KVVLFMKGTRDFPMCGFSNTVVQIL-------KNLNVPFEDVNILENEMLRQGLKEYSNWPTFPQLYIG 80 (109)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHH-------HHTTCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEEET
T ss_pred CEEEEEecCCCCCCChhHHHHHHHH-------HHcCCCcEEEECCCCHHHHHHHHHHHCCCCCCeEEEC
Confidence 36667776 4999999766555 45577666666543 3333444444443 466 5665
No 276
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=92.29 E-value=0.52 Score=44.28 Aligned_cols=35 Identities=23% Similarity=0.172 Sum_probs=27.6
Q ss_pred CCccccCCCCCcEEecCCCCeEeCCCccCCCeEEEE
Q 025441 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVA 102 (252)
Q Consensus 67 ~~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLv 102 (252)
++...|..+|+.-|.+ +|+.+++-|+++.+.+||.
T Consensus 418 ~~~~pG~r~p~~~l~~-~~~~~~~~dl~g~~f~ll~ 452 (535)
T 3ihg_A 418 PSGRPGFRGPHVLVSR-HGERLSTVDLFGDGWTLLA 452 (535)
T ss_dssp CCCCTTSBCCCCEEEE-TTEEEEGGGGCSSSEEEEE
T ss_pred CCCCCCCcCCCceeec-CCceeeHHHhcCCceEEEe
Confidence 4567899999999853 5788999999977766655
No 277
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=92.24 E-value=0.29 Score=37.43 Aligned_cols=56 Identities=18% Similarity=0.253 Sum_probs=33.7
Q ss_pred EEEEEEcC----CCCHhhHHHHHHHHHhHHHHHhCCCE---EEEEecCCHHHH-HHHHHHcCC-cce-eeecC
Q 025441 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPGSVEQA-RTFSEQTKF-KGE-VYADP 161 (252)
Q Consensus 99 vVLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~Gv~---vVaVs~d~~~~~-~~f~~~~~l-~fp-llsDp 161 (252)
-|++|-.. .|||+|++-..-|.+ .|+. +..+..+....+ +.+.+..+. ++| |+.|-
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI~g 82 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGN-------QGVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLYVNK 82 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHH-------HTBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHH-------cCCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeEEECC
Confidence 36777777 499999977666544 4665 555555433333 444454554 477 66663
No 278
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.22 E-value=0.35 Score=36.24 Aligned_cols=48 Identities=4% Similarity=0.001 Sum_probs=29.2
Q ss_pred EEEEcCCCCHhhHH-HHHHHHHhHHHHHhCCCEEEEEecCCHHHH-HHHHHH
Q 025441 101 VAFARHFGCVLCRK-RADYLAAKKDVMDASGVALVLIGPGSVEQA-RTFSEQ 150 (252)
Q Consensus 101 LvF~R~~~Cp~C~~-el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~-~~f~~~ 150 (252)
|++|-..+||+|.. +.+ ++....|++.|+....|..+..... +++.+.
T Consensus 10 V~vy~~~~C~~C~~~~~~--~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~ 59 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQ--QDVVRFLEANKIEFEEVDITMSEEQRQWMYKN 59 (111)
T ss_dssp EEEEECSSCSCHHHHHHH--HHHHHHHHHTTCCEEEEETTTCHHHHHHHHHS
T ss_pred EEEEEcCCCCCcccchhH--HHHHHHHHHcCCCEEEEECCCCHHHHHHHHHH
Confidence 44556799999993 111 1223346678888888887654344 445555
No 279
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=92.21 E-value=0.35 Score=35.35 Aligned_cols=21 Identities=29% Similarity=0.493 Sum_probs=16.4
Q ss_pred EEEEcCCCCHhhHHHHHHHHH
Q 025441 101 VAFARHFGCVLCRKRADYLAA 121 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~ 121 (252)
|++|...|||+|++-..-|.+
T Consensus 24 v~ly~~~~Cp~C~~ak~~L~~ 44 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTKKLLTD 44 (103)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHHH
Confidence 455789999999987776654
No 280
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=92.20 E-value=0.38 Score=35.96 Aligned_cols=50 Identities=12% Similarity=0.173 Sum_probs=29.6
Q ss_pred EcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC---CHHHHHH-HHHHcCC-cce-eeec
Q 025441 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG---SVEQART-FSEQTKF-KGE-VYAD 160 (252)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d---~~~~~~~-f~~~~~l-~fp-llsD 160 (252)
|...|||+|++-..-|. +.|+..-.|..+ +...+++ +.+..+. ++| ++.|
T Consensus 22 y~~~~Cp~C~~ak~~L~-------~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi~ 77 (114)
T 3h8q_A 22 FSKSYCPHSTRVKELFS-------SLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVN 77 (114)
T ss_dssp EECTTCHHHHHHHHHHH-------HTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEET
T ss_pred EEcCCCCcHHHHHHHHH-------HcCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEEC
Confidence 67799999986665554 456665555554 2334433 4455554 466 4554
No 281
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=92.19 E-value=0.26 Score=43.76 Aligned_cols=56 Identities=7% Similarity=0.070 Sum_probs=40.6
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
.+.++++|...||+.|++.++.|.++..+++.. +.++.|.++.. .....++++++.
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~-~~~~~~~~fgi~ 190 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHT-DNQRILEFFGLK 190 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSG-GGHHHHHHTTCC
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChH-HHHHHHHHcCCC
Confidence 356677778999999999999999999988755 77888877732 123344555553
No 282
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=92.14 E-value=0.25 Score=42.82 Aligned_cols=58 Identities=7% Similarity=-0.026 Sum_probs=38.6
Q ss_pred CCCeEEEEEEc--CCCCHhhHHHHHHHHHhHHHHHh--CCCEEEEEecCC--HHHHHHHHHHcCCc---ce
Q 025441 95 KDRKAVVAFAR--HFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGS--VEQARTFSEQTKFK---GE 156 (252)
Q Consensus 95 ~~~~vVLvF~R--~~~Cp~C~~el~~L~~~~~~~~~--~Gv~vVaVs~d~--~~~~~~f~~~~~l~---fp 156 (252)
...+.|||.|+ +.||+ ..+.+.++..++.. ..+.+.-|.++. .+.....++++++. ||
T Consensus 31 ~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~P 97 (248)
T 2c0g_A 31 ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNFP 97 (248)
T ss_dssp TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSCC
T ss_pred hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCCC
Confidence 34445666666 99998 67777777777764 468888888775 11134456677776 66
No 283
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=91.47 E-value=0.2 Score=37.86 Aligned_cols=64 Identities=14% Similarity=0.190 Sum_probs=47.8
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecC----CHHHHHHHHHHcCCcceeeecCChHHHHHcCCcc
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d----~~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~ 173 (252)
|.+|-..+|+.|++-..-| ++.|+..-.|... +.+.++++.++.|+ .-+.+.....|+.+|...
T Consensus 2 i~iY~~~~C~~C~kak~~L-------~~~gi~~~~~di~~~~~~~~~l~~~~~~~g~--~~l~n~~~~~~k~l~~~~ 69 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWL-------DEHKVAYDFHDYKAVGIDREHLRRWCAEHGW--QTVLNRAGTTFRKLDEAQ 69 (114)
T ss_dssp EEEEECSSCHHHHHHHHHH-------HHTTCCEEEEEHHHHCCCHHHHHHHHHHHCH--HHHBCTTSHHHHTSCHHH
T ss_pred EEEEECCCChHHHHHHHHH-------HHCCCceEEEeecCCCCCHHHHHHHHHhCCh--HHhccCCcHhHHhcCccc
Confidence 4567889999999766654 5678877666543 34788889988774 556688899999998653
No 284
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=91.37 E-value=0.039 Score=49.16 Aligned_cols=38 Identities=13% Similarity=0.264 Sum_probs=25.9
Q ss_pred eEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHH
Q 025441 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVM 126 (252)
Q Consensus 87 ~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~ 126 (252)
.+.+.+..++. .++.|.+.|||+|++..+.+++..+++
T Consensus 189 ~~~la~~l~~~--~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 189 AVGLAAHLRQI--GGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHHT--TCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHhCCC--CEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 34444443322 245678999999999999988876543
No 285
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=91.28 E-value=0.53 Score=45.68 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=27.8
Q ss_pred ccccCCCCCcEEec-CCCCeEeCCCccC--CCeEEEEE
Q 025441 69 EDTKNLLDTVKVYD-VNGNAIPISDLWK--DRKAVVAF 103 (252)
Q Consensus 69 ~~~g~~apdf~L~d-~~G~~v~ls~l~~--~~~vVLvF 103 (252)
..+|..+|++.|.. .+|+++.+.+++. ++.+||+|
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~ 504 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAF 504 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEE
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEe
Confidence 46899999999875 5899999999885 35666665
No 286
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=91.16 E-value=0.57 Score=33.54 Aligned_cols=54 Identities=4% Similarity=-0.054 Sum_probs=32.8
Q ss_pred EEEEcCCCCHhhH-----HHHHHHHHhHHHHHhCCCEEEEEecCCH-HHHHHHHHHcCC---cce-eeec
Q 025441 101 VAFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQTKF---KGE-VYAD 160 (252)
Q Consensus 101 LvF~R~~~Cp~C~-----~el~~L~~~~~~~~~~Gv~vVaVs~d~~-~~~~~f~~~~~l---~fp-llsD 160 (252)
|+.|-..+||+|. ..+.+ .|++.|+....|..+.. +..+++.+..|. ++| |+.|
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~------~L~~~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi~ 67 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTR------ILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVNG 67 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHH------HHHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEET
T ss_pred EEEEEcCCCCCchhhHHHHHHHH------HHHHCCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEEC
Confidence 3445679999994 33332 35677888777777543 444456566563 567 4555
No 287
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=91.15 E-value=0.3 Score=36.74 Aligned_cols=60 Identities=12% Similarity=0.172 Sum_probs=34.9
Q ss_pred ccCCCeEEEEEEcC----CCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCC-HHHHHHHHHHcCC-cce-eeec
Q 025441 93 LWKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGE-VYAD 160 (252)
Q Consensus 93 l~~~~~vVLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~-~~~~~~f~~~~~l-~fp-llsD 160 (252)
+.+..+ |++|-.+ .|||+|++-..-| ++.|+....+..+. ++..+++.+..+. ++| |+.|
T Consensus 12 ~i~~~~-Vvlf~kg~~~~~~Cp~C~~ak~~L-------~~~gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ifi~ 78 (111)
T 3zyw_A 12 LTHAAP-CMLFMKGTPQEPRCGFSKQMVEIL-------HKHNIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYVS 78 (111)
T ss_dssp HHTSSS-EEEEESBCSSSBSSHHHHHHHHHH-------HHTTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEET
T ss_pred HHhcCC-EEEEEecCCCCCcchhHHHHHHHH-------HHcCCCeEEEECcCCHHHHHHHHHHHCCCCCCEEEEC
Confidence 333444 5566653 8999999766655 45676666665543 3333444444453 477 5665
No 288
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=91.11 E-value=0.55 Score=35.71 Aligned_cols=64 Identities=14% Similarity=0.173 Sum_probs=47.5
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec----CCHHHHHHHHHHcCCcceeeecCChHHHHHcCCcc
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~----d~~~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~ 173 (252)
|.+|-..+|+.|++-..-| ++.|+..-.|.. .+.+.++++.++.|+ .-+.+.....|+.+|...
T Consensus 7 i~iY~~~~C~~C~ka~~~L-------~~~gi~y~~~di~~~~~~~~~l~~~~~~~g~--~~l~n~~~~~~k~l~~~~ 74 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWL-------EDHGIDYTFHDYKKEGLDAETLDRFLKTVPW--EQLLNRAGTTFRKLPEDV 74 (120)
T ss_dssp EEEEECSSCHHHHHHHHHH-------HHHTCCEEEEEHHHHCCCHHHHHHHHHHSCG--GGTBCSSSHHHHHSCHHH
T ss_pred EEEEECCCChHHHHHHHHH-------HHcCCcEEEEeeeCCCCCHHHHHHHHHHcCh--HhhccCCchhhHhcCchh
Confidence 6678889999999776665 445777655544 234788888888774 556788899999998653
No 289
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=90.88 E-value=0.14 Score=39.11 Aligned_cols=53 Identities=8% Similarity=0.027 Sum_probs=37.3
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
...|++.||+. |..|+...+.|.++..+++.. +.++-|..+.... .++++++.
T Consensus 23 ~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~~~~---~a~~~gi~ 75 (133)
T 2djk_A 23 GIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKAFGA---HAGNLNLK 75 (133)
T ss_dssp TSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTTTGG---GTTTTTCC
T ss_pred CCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHHhHH---HHHHcCCC
Confidence 34467777888 889999999999988877543 7788887764332 34455553
No 290
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=89.92 E-value=0.16 Score=41.49 Aligned_cols=36 Identities=17% Similarity=0.298 Sum_probs=25.8
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEE
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaV 136 (252)
+++|| -|..+|||+|....+.|.++.+++ ++.+.-+
T Consensus 23 ~~~vv-ef~d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~ 58 (185)
T 3feu_A 23 MAPVT-EVFALSCGHCRNMENFLPVISQEA---GTDIGKM 58 (185)
T ss_dssp CCSEE-EEECTTCHHHHHHGGGHHHHHHHH---TSCCEEE
T ss_pred CCEEE-EEECCCChhHHHhhHHHHHHHHHh---CCeEEEE
Confidence 44544 445799999999998888887776 4554433
No 291
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=88.73 E-value=0.47 Score=37.55 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=27.1
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEE
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaV 136 (252)
++.++.|+.|--++||+|++..+.|.++ .++.|+.+
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l------~~v~v~~~ 47 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM------TDVTVYSF 47 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC------CSEEEEEE
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc------CceEEEEE
Confidence 3567888888899999999998888654 23565544
No 292
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=87.03 E-value=0.64 Score=39.46 Aligned_cols=45 Identities=13% Similarity=0.094 Sum_probs=29.2
Q ss_pred CCeEEEEEEcCCC--CHhhHHHHHHHHHhHHHHHh-CC---CEEEEEecCCH
Q 025441 96 DRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDA-SG---VALVLIGPGSV 141 (252)
Q Consensus 96 ~~~vVLvF~R~~~--Cp~C~~el~~L~~~~~~~~~-~G---v~vVaVs~d~~ 141 (252)
++|++|.|| +.| |+.|++-.+-|.++...... .| +.++.|..+..
T Consensus 25 ~~pv~v~~~-~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~ 75 (243)
T 2hls_A 25 VNPVEVHVF-LSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESD 75 (243)
T ss_dssp CSCEEEEEE-ECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTT
T ss_pred CCCEEEEEE-eCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcC
Confidence 467777775 677 99999887777776654311 12 56666665543
No 293
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=85.01 E-value=0.68 Score=37.74 Aligned_cols=43 Identities=9% Similarity=-0.066 Sum_probs=31.8
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs 137 (252)
++.|+.|+.|--+.||+|.+..+.+.+...+...-.++++...
T Consensus 12 g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 4679999999999999999988888776555422246666543
No 294
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=83.23 E-value=1.8 Score=34.39 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=26.0
Q ss_pred eEEEEEEcCCCCHhhHHHHHHH-HHhHHHHHhCCCEEEEEec
Q 025441 98 KAVVAFARHFGCVLCRKRADYL-AAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L-~~~~~~~~~~Gv~vVaVs~ 138 (252)
+++|. |..+.||+|....+.| .++.+++. ..+.+..+..
T Consensus 19 ~~~ie-f~d~~CP~C~~~~~~l~~~l~~~~~-~~v~~~~~~l 58 (195)
T 3c7m_A 19 KTLIK-VFSYACPFCYKYDKAVTGPVSEKVK-DIVAFTPFHL 58 (195)
T ss_dssp TEEEE-EECTTCHHHHHHHHHTHHHHHHHTT-TTCEEEEEEC
T ss_pred cEEEE-EEeCcCcchhhCcHHHHHHHHHhCC-CceEEEEEec
Confidence 34444 4569999999988888 66665543 2366666653
No 295
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=82.24 E-value=3.4 Score=31.62 Aligned_cols=56 Identities=18% Similarity=0.214 Sum_probs=32.7
Q ss_pred EEEEEEcC----CCCHhhHHHHHHHHHhHHHHHhCCCE-EEEEecCC-HHHHHHHHHHcCC-cce-eeecC
Q 025441 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGS-VEQARTFSEQTKF-KGE-VYADP 161 (252)
Q Consensus 99 vVLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~Gv~-vVaVs~d~-~~~~~~f~~~~~l-~fp-llsDp 161 (252)
-||+|--+ +.||||.+-..-| ++.|+. ...|..++ ++.-+...+..++ ++| ||.+-
T Consensus 21 ~VvvF~Kgt~~~P~C~fc~~ak~lL-------~~~gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIFI~g 84 (118)
T 2wul_A 21 KVVVFLKGTPEQPQCGFSNAVVQIL-------RLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNG 84 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHH-------HHTTCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred CEEEEEcCCCCCCCCHHHHHHHHHH-------HHhCCcCeEeecccCCHHHHHHHHHhccCCCCCeEeECC
Confidence 36777776 4899999766655 445652 44444433 3333344455565 477 77764
No 296
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=81.52 E-value=2.4 Score=33.16 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=26.2
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEE
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaV 136 (252)
..++|+-|+ -+.||+|...-+.+.++..++.+ ++.++-+
T Consensus 21 ~~~~vvEf~-dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~ 59 (184)
T 4dvc_A 21 SSPVVSEFF-SFYCPHCNTFEPIIAQLKQQLPE-GAKFQKN 59 (184)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TCEEEEE
T ss_pred CCCEEEEEE-CCCCHhHHHHhHHHHHHHhhcCC-ceEEEEE
Confidence 456666665 69999999988777766665433 3455544
No 297
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=81.41 E-value=0.65 Score=38.00 Aligned_cols=39 Identities=18% Similarity=0.203 Sum_probs=26.1
Q ss_pred eEEEEEEcCCCCHhhHHHHHHH---HHhHHHHHhCCCEEEEEe
Q 025441 98 KAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIG 137 (252)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~Gv~vVaVs 137 (252)
++.|+-|..++||+|...-+.| .++.+++.+ ++.++-+.
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~ 63 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYH 63 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEE
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEEe
Confidence 3455566799999999988876 355554432 46666655
No 298
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=80.96 E-value=2.2 Score=33.96 Aligned_cols=42 Identities=12% Similarity=0.295 Sum_probs=29.8
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHH-HhHHHHHhC-CCEEEEEe
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDAS-GVALVLIG 137 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~-~~~~~~~~~-Gv~vVaVs 137 (252)
+.|+.|+.|.-+-||+|....+.+. .+.+++.+. ++.++...
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 4577888889999999999988874 454555433 47776654
No 299
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=78.87 E-value=1.7 Score=36.17 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=30.4
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC-cceeee
Q 025441 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF-KGEVYA 159 (252)
Q Consensus 100 VLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l-~fplls 159 (252)
.|.+|...|||+|++-..-|. +.|+..-.|..+.....+++.+.++. ..|.+.
T Consensus 171 ~i~ly~~~~Cp~C~~a~~~L~-------~~~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~ 224 (241)
T 1nm3_A 171 SISIFTKPGCPFCAKAKQLLH-------DKGLSFEEIILGHDATIVSVRAVSGRTTVPQVF 224 (241)
T ss_dssp CEEEEECSSCHHHHHHHHHHH-------HHTCCCEEEETTTTCCHHHHHHHTCCSSSCEEE
T ss_pred eEEEEECCCChHHHHHHHHHH-------HcCCceEEEECCCchHHHHHHHHhCCCCcCEEE
Confidence 355567799999997655554 34555444544432223555556664 466443
No 300
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=76.77 E-value=7.2 Score=29.93 Aligned_cols=46 Identities=9% Similarity=-0.017 Sum_probs=30.9
Q ss_pred EEEEEcCCCCHhhH-----HHHHHHHHhHHHHHhCCCEEEEEecC-CHHHHHHHHHHc
Q 025441 100 VVAFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQT 151 (252)
Q Consensus 100 VLvF~R~~~Cp~C~-----~el~~L~~~~~~~~~~Gv~vVaVs~d-~~~~~~~f~~~~ 151 (252)
||..|-...||+|. ..+.. -|+.+|+..--|..+ +++.-+++.++.
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~------lL~~kgV~feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLG------FLEANKIGFEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHH------HHHHTTCCEEEEECTTCHHHHHHHHHHS
T ss_pred CEEEEecCCCCCccchHHHHHHHH------HHHHCCCceEEEECCCCHHHHHHHHHhc
Confidence 35566799999995 33333 377889988888776 444445566665
No 301
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=76.04 E-value=3 Score=36.64 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=27.7
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~ 138 (252)
++.+|+.|.-.-||||++..++|.+..+ +-.+.++.+..
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~---~~~Vr~i~~Pi 185 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLK---ENTVRMVVVGW 185 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHH---HCEEEEEECCC
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhh---CCcEEEEEeec
Confidence 4556666679999999999999986543 34456665543
No 302
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.31 E-value=12 Score=30.23 Aligned_cols=47 Identities=13% Similarity=0.079 Sum_probs=34.5
Q ss_pred CCCeEEEEEEcCCCCHhhHHHHHHHHH---hHHHHHhCCCEEEEEecCCHH
Q 025441 95 KDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~---~~~~~~~~Gv~vVaVs~d~~~ 142 (252)
+++|.|+|++.+.||+.|+....++=. ..+-+ +.+..+++...++.+
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l-~~nfV~w~~dv~~~e 102 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYL-SQNFITWAWDLTKDS 102 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHH-HHTEEEEEEECCSHH
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHH-HcCEEEEEEeCCCch
Confidence 357899999999999999987765522 23334 347778888888776
No 303
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=73.33 E-value=4.2 Score=33.31 Aligned_cols=42 Identities=12% Similarity=0.186 Sum_probs=28.7
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHHH-HhHHHHHh-CCCEEEEEe
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDA-SGVALVLIG 137 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~-~~~~~~~~-~Gv~vVaVs 137 (252)
+.|+.|+.|--+.||+|...-+.+. .+.+++-+ -.+.++.+.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~ 71 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVN 71 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEe
Confidence 5688888889999999998776653 33344433 346666554
No 304
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=71.83 E-value=5.2 Score=33.55 Aligned_cols=42 Identities=7% Similarity=0.071 Sum_probs=29.6
Q ss_pred CCeEEEEEEcCCCCHhhHHHHHHH-HHhHHHHHhC-CCEEEEEe
Q 025441 96 DRKAVVAFARHFGCVLCRKRADYL-AAKKDVMDAS-GVALVLIG 137 (252)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L-~~~~~~~~~~-Gv~vVaVs 137 (252)
+.|+.|+.|--+.||+|+..-+.+ .++.+++-+. .+.++...
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 578888888999999999987764 4555555333 46665543
No 305
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=71.17 E-value=8.4 Score=31.72 Aligned_cols=49 Identities=10% Similarity=0.001 Sum_probs=33.3
Q ss_pred eEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHH-HHHhC-CCEEEEEe
Q 025441 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKD-VMDAS-GVALVLIG 137 (252)
Q Consensus 87 ~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~-~~~~~-Gv~vVaVs 137 (252)
...+++- +.|+.|+.|--+-||+|++..+.+..... ++-+. .+.++...
T Consensus 7 ~~~~G~~--~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~ 57 (205)
T 3gmf_A 7 HHLLGNP--AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRN 57 (205)
T ss_dssp EEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred CceecCC--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 3445553 67899999999999999998877765443 44333 35555443
No 306
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=70.58 E-value=16 Score=31.81 Aligned_cols=37 Identities=22% Similarity=0.273 Sum_probs=26.9
Q ss_pred eEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe
Q 025441 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs 137 (252)
++.|..|-..+||+|..--.-|.+... +.|+..+.+.
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~---~~~vi~l~~~ 79 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQ---KGDVVGLSYH 79 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHH---HTSSEEEEEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhc---cCCeeeEEEE
Confidence 378888999999999987777766643 3566544554
No 307
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=69.47 E-value=16 Score=29.25 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=26.3
Q ss_pred eEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe
Q 025441 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs 137 (252)
++.|.+|--+-||+|....+.+.++.. +.+.++++.-+.
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 456777789999999966555555544 434467776654
No 308
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=68.80 E-value=3.6 Score=31.58 Aligned_cols=62 Identities=8% Similarity=0.060 Sum_probs=33.7
Q ss_pred cCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCC--CEEEEEecC-CHHHHHHHH-HHcCC-cce-eeecC
Q 025441 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPG-SVEQARTFS-EQTKF-KGE-VYADP 161 (252)
Q Consensus 94 ~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~G--v~vVaVs~d-~~~~~~~f~-~~~~l-~fp-llsDp 161 (252)
.+..+ |++| -..|||+|++--.-|.+.+ ..| ..++-|..+ +.+..+++. +..+. ++| |+.|-
T Consensus 11 i~~~~-Vvvy-sk~~Cp~C~~ak~lL~~~~----~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI~G 78 (127)
T 3l4n_A 11 LDLSP-IIIF-SKSTCSYSKGMKELLENEY----QFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLVNG 78 (127)
T ss_dssp HTSCS-EEEE-ECTTCHHHHHHHHHHHHHE----EEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETT
T ss_pred HccCC-EEEE-EcCCCccHHHHHHHHHHhc----ccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEECC
Confidence 33444 4444 4699999997776665521 123 345555543 334555544 33454 577 66663
No 309
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=66.36 E-value=16 Score=29.98 Aligned_cols=56 Identities=9% Similarity=0.099 Sum_probs=38.7
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
.|.++++|-..||..|.+.+..+.+...+++.. +.++.|..+..+ ....++.+|+.
T Consensus 131 ~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~~~-~~~~l~~fgl~ 186 (227)
T 4f9z_D 131 IQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGMKE-NGKVISFFKLK 186 (227)
T ss_dssp CCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTSGG-GHHHHHHTTCC
T ss_pred CceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCccHh-HHHHHHHcCCC
Confidence 366777777789999999999999988887665 677777766422 12233555553
No 310
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=52.61 E-value=26 Score=31.91 Aligned_cols=55 Identities=9% Similarity=0.146 Sum_probs=28.6
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCE---EEEEec---CC-HHHHHHHHHHcCC-cce-eeecC
Q 025441 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVA---LVLIGP---GS-VEQARTFSEQTKF-KGE-VYADP 161 (252)
Q Consensus 100 VLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~---vVaVs~---d~-~~~~~~f~~~~~l-~fp-llsDp 161 (252)
|++|. ..|||+|++-...| |++.|+. +-++.. +. .+..++..+..+. ++| |+.|-
T Consensus 263 VvVYs-k~~CPyC~~Ak~~L------L~~~gV~y~eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVFI~G 326 (362)
T 2jad_A 263 IFVAS-KTYCPYSHAALNTL------FEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYING 326 (362)
T ss_dssp EEEEE-CTTCHHHHHHHHHH------HTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEEETT
T ss_pred EEEEE-cCCCcchHHHHHHH------HHHcCCCcceEEEEEeccccCCHHHHHHHHHHHCCCCcCEEEECC
Confidence 44444 58999999765532 2344433 222232 22 2333445555565 577 56663
No 311
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=51.98 E-value=16 Score=27.81 Aligned_cols=39 Identities=3% Similarity=0.032 Sum_probs=30.7
Q ss_pred HHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcc
Q 025441 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (252)
Q Consensus 117 ~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~f 155 (252)
.+|..+.+.+++.|..+|+|...+.+..++.+...|++.
T Consensus 61 ~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 61 VNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRMGLPL 99 (120)
T ss_dssp CCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHCCCCc
Confidence 357777888899999999999877666777777777764
No 312
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=51.19 E-value=17 Score=34.31 Aligned_cols=18 Identities=33% Similarity=0.547 Sum_probs=12.6
Q ss_pred EcCCCCHhhHHHHHHHHH
Q 025441 104 ARHFGCVLCRKRADYLAA 121 (252)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~ 121 (252)
|-..|||+|.+--..|.+
T Consensus 23 y~~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 23 FSKTTCPYCKKVKDVLAE 40 (598)
T ss_dssp EECTTCHHHHHHHHHHHH
T ss_pred EECCCChhHHHHHHHHHH
Confidence 456799999966555543
No 313
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=50.79 E-value=28 Score=27.92 Aligned_cols=37 Identities=8% Similarity=0.142 Sum_probs=28.4
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe
Q 025441 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 100 VLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs 137 (252)
-|.+|.-+.||+|..-.+.|.++..++. .++.|.-+.
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~-~~v~v~~~p 40 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLP-GVIQFEYVV 40 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSC-TTSEEEEEE
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCC-CCceEEEEe
Confidence 4667788999999998888888877663 467776554
No 314
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=50.57 E-value=14 Score=33.51 Aligned_cols=39 Identities=13% Similarity=0.273 Sum_probs=33.6
Q ss_pred HHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcc
Q 025441 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (252)
Q Consensus 117 ~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~f 155 (252)
+...++...+++.|+.++.||-+..+.++.++++.++.+
T Consensus 224 p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y 262 (385)
T 4gxt_A 224 DEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNY 262 (385)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSC
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCccc
Confidence 556667888899999999999999999999999987654
No 315
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=47.25 E-value=48 Score=23.91 Aligned_cols=53 Identities=6% Similarity=0.045 Sum_probs=39.0
Q ss_pred hHHHHHhCCCEEEEEecCCHH----HHHHHHHHcCCcceeeecCChHHHHHcCCccc
Q 025441 122 KKDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 122 ~~~~~~~~Gv~vVaVs~d~~~----~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~ 174 (252)
....++...+.+|.+..|.++ .+..+++++++|+-.|.+...++-++.|....
T Consensus 24 v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~~~s~~eLG~a~G~~~~ 80 (101)
T 1w41_A 24 SIQYAKMGGAKLIIVARNARPDIKEDIEYYARLSGIPVYEFEGTSVELGTLLGRPHT 80 (101)
T ss_dssp HHHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESSCHHHHHHHTTCSSC
T ss_pred HHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEecCCHHHHHHHhCCCCc
Confidence 344566667889999988664 44566777888876666788899999997643
No 316
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=45.96 E-value=36 Score=24.56 Aligned_cols=53 Identities=6% Similarity=0.048 Sum_probs=39.0
Q ss_pred hHHHHHhCCCEEEEEecCCHH----HHHHHHHHcCCcceeeecCChHHHHHcCCccc
Q 025441 122 KKDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 122 ~~~~~~~~Gv~vVaVs~d~~~----~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~ 174 (252)
....++...+.+|.+..|.++ .+..+++++++|+-.+.+...++-++.|....
T Consensus 23 v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~~~ 79 (99)
T 3j21_Z 23 TIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVELGTLLGKPFV 79 (99)
T ss_dssp HHHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEEECCCSCGGGGTTCSTTC
T ss_pred HHHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHHCCCCC
Confidence 344566667899999988664 44556788888877777778888888887653
No 317
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=45.93 E-value=17 Score=32.29 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=30.2
Q ss_pred HHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHc
Q 025441 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT 151 (252)
Q Consensus 117 ~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~ 151 (252)
+...++...+++.|.+|+.||.+..+.++.|+++.
T Consensus 146 ~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 146 SGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 44566788889999999999999999999999873
No 318
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=42.02 E-value=23 Score=24.18 Aligned_cols=28 Identities=21% Similarity=0.224 Sum_probs=24.7
Q ss_pred EEEEecCCHHHHHHHHHHcCCcceeeec
Q 025441 133 LVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 133 vVaVs~d~~~~~~~f~~~~~l~fpllsD 160 (252)
=|.|.+......+++.++.+++|.|+.+
T Consensus 50 dI~V~p~~~~~f~~~L~~~~I~y~Vlie 77 (78)
T 2gjf_A 50 VILIPSDMVEWFLEMLKAKGIPFTVYVE 77 (78)
T ss_dssp EEEECTTSHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEECHHHHHHHHHHHHHCCCcEEEEeC
Confidence 3688999999999999999999998764
No 319
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=41.27 E-value=45 Score=28.74 Aligned_cols=84 Identities=8% Similarity=0.049 Sum_probs=50.2
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccC------CCeEEEEEEcCCCCHhhHHHHHHHHH-hHH---------HHHhCCCEE
Q 025441 70 DTKNLLDTVKVYDVNGNAIPISDLWK------DRKAVVAFARHFGCVLCRKRADYLAA-KKD---------VMDASGVAL 133 (252)
Q Consensus 70 ~~g~~apdf~L~d~~G~~v~ls~l~~------~~~vVLvF~R~~~Cp~C~~el~~L~~-~~~---------~~~~~Gv~v 133 (252)
+..+.+|-|++.|.+|.++-...--. ++.+.++|+ +++++..+-+ +.. ++ ..+++|
T Consensus 9 ekL~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~-------s~~dA~~~L~~lk~~~~~np~~~~~-~~~~kV 80 (252)
T 4ev1_A 9 EKLDSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM-------SRQEAQAFINELRNAKNKDPKMQEI-VKSLQV 80 (252)
T ss_dssp HHHTTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES-------CHHHHHHHHHHHHHCSSCCHHHHHH-HTTCEE
T ss_pred HHhcCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe-------cHHHHHHHHHHHHhccccCchhhhh-ccCceE
Confidence 45678899999999999876653311 234555554 6666665443 222 22 347999
Q ss_pred EEEecCCHHHHHHHH--HHcCCcceeeecC
Q 025441 134 VLIGPGSVEQARTFS--EQTKFKGEVYADP 161 (252)
Q Consensus 134 VaVs~d~~~~~~~f~--~~~~l~fpllsDp 161 (252)
+.|+-+....+..-- +..++.|.++.|+
T Consensus 81 ~~vsL~~vyql~~~~~~k~~~l~F~fvP~~ 110 (252)
T 4ev1_A 81 TAVPLGVIYQQLQQTKKDPNRLLFAFKPVD 110 (252)
T ss_dssp EEEEHHHHHHHHHHTTTCTTCEEEEEECCH
T ss_pred EEeeHHHHHHHHHhhccCCcCceEEEcCCH
Confidence 999998654332111 2234556666654
No 320
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=40.85 E-value=89 Score=29.40 Aligned_cols=63 Identities=17% Similarity=0.013 Sum_probs=44.1
Q ss_pred CeEEEEEEcCCC--C----H-hhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcceeeecC
Q 025441 97 RKAVVAFARHFG--C----V-LCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (252)
Q Consensus 97 ~~vVLvF~R~~~--C----p-~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpllsDp 161 (252)
.|++.+|..-.. - + --+--+..|+++..+|++.|..++++.-+..+. .++++++++.- |+.|.
T Consensus 68 ~pVl~vfildp~~~~~~~~~~r~~FL~~sL~dL~~~L~~lG~~L~v~~G~p~~v-~~L~~~~~a~~-V~~d~ 137 (506)
T 3umv_A 68 SPLAVAFALFPRPFLLSARRRQLGFLLRGLRRLAADAAARHLPFFLFTGGPAEI-PALVQRLGAST-LVADF 137 (506)
T ss_dssp CCEEEEEECCCTTCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCTTHH-HHHHHHTTCSE-EEECC
T ss_pred CCEEEEEeccchhhccCCCHHHHHHHHHHHHHHHHHHHHcCCceEEEecChHHH-HHHHHhcCCCE-EEecc
Confidence 467777765433 1 1 123456778888999999999999887666677 99999988764 44554
No 321
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=40.43 E-value=52 Score=25.92 Aligned_cols=38 Identities=8% Similarity=-0.114 Sum_probs=31.1
Q ss_pred HHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 117 ~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
+...+....+++.|+.++.|+.+....++.+.+.+++.
T Consensus 95 ~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 95 VQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 34445566778899999999999888899999998886
No 322
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=39.35 E-value=57 Score=26.52 Aligned_cols=39 Identities=10% Similarity=0.147 Sum_probs=30.4
Q ss_pred HHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCccee
Q 025441 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEV 157 (252)
Q Consensus 119 L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpl 157 (252)
..+...++++.|+.++.++-.+...++.+.++.+++.++
T Consensus 27 ~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~ 65 (227)
T 1l6r_A 27 AIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPV 65 (227)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeE
Confidence 334456677889999999988888899998888887543
No 323
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=38.49 E-value=44 Score=25.98 Aligned_cols=41 Identities=7% Similarity=0.080 Sum_probs=31.0
Q ss_pred HHhHHHHHhCCCEEEEEecCC---HHHHHHHHHHcCCcceeeec
Q 025441 120 AAKKDVMDASGVALVLIGPGS---VEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 120 ~~~~~~~~~~Gv~vVaVs~d~---~~~~~~f~~~~~l~fpllsD 160 (252)
.+...++++.|..|+.++.-+ ...+..|.++++++++.+.+
T Consensus 30 ~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~ 73 (142)
T 2obb_A 30 VETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANK 73 (142)
T ss_dssp HHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESS
T ss_pred HHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEc
Confidence 344556678999998888765 46788899999999886654
No 324
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=36.66 E-value=70 Score=27.91 Aligned_cols=61 Identities=11% Similarity=0.146 Sum_probs=41.4
Q ss_pred HHHHHHHHhHHHHHhCCCE-EEEEecC------CH-HHHHHHHHHcCCcceeeecCChHHHHHcCCccc
Q 025441 114 KRADYLAAKKDVMDASGVA-LVLIGPG------SV-EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 114 ~el~~L~~~~~~~~~~Gv~-vVaVs~d------~~-~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~ 174 (252)
+-+..|++..+.+++.|++ +.+|.+. +. +.+++-.+++|++..|++..+..-|..+|+...
T Consensus 57 r~~~~L~~f~~~~~~~~v~~v~~vATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~ 125 (315)
T 3mdq_A 57 RALDTLKKFRVILDEHAVVHVIATGTSAVRSGSNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQA 125 (315)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECHHHHHCTTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEeeHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhc
Confidence 3444555666667777876 7777763 22 345566677899999999888877777776544
No 325
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=36.50 E-value=65 Score=23.48 Aligned_cols=53 Identities=11% Similarity=0.083 Sum_probs=39.1
Q ss_pred hHHHHHhCCCEEEEEecCCHH----HHHHHHHHcCCcceeeecCChHHHHHcCCccc
Q 025441 122 KKDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 122 ~~~~~~~~Gv~vVaVs~d~~~----~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~ 174 (252)
....++.-.+.+|.+..|-++ .+..+++.+++|+-.|.+...++-++.|....
T Consensus 30 v~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~A~Gk~~~ 86 (105)
T 3u5e_c 30 TVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFR 86 (105)
T ss_dssp HHHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCSSC
T ss_pred HHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHhCCccc
Confidence 344556666889999887653 45667788888886678888899999997654
No 326
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=35.62 E-value=47 Score=25.78 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=29.6
Q ss_pred HHHHHhHHHHHhCCCEEEEEecCC-HHHHHHHHHHcCCc
Q 025441 117 DYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFK 154 (252)
Q Consensus 117 ~~L~~~~~~~~~~Gv~vVaVs~d~-~~~~~~f~~~~~l~ 154 (252)
+...+...++++.|+.++.++..+ ...++.+.+..++.
T Consensus 71 ~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 71 PEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp TTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred hhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 344455666778899999999887 68888888888876
No 327
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=34.63 E-value=63 Score=24.18 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=29.1
Q ss_pred HHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 120 ~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
.+...++++.|+.++.++..+...++.+.++.++.
T Consensus 42 ~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 76 (162)
T 2p9j_A 42 GIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE 76 (162)
T ss_dssp HHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH
Confidence 35566678899999999998888899999998876
No 328
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=34.06 E-value=40 Score=26.25 Aligned_cols=41 Identities=10% Similarity=0.008 Sum_probs=30.9
Q ss_pred HHHHHhHHHHHhCCCEEEEEecC---------------CHHHHHHHHHHcCCccee
Q 025441 117 DYLAAKKDVMDASGVALVLIGPG---------------SVEQARTFSEQTKFKGEV 157 (252)
Q Consensus 117 ~~L~~~~~~~~~~Gv~vVaVs~d---------------~~~~~~~f~~~~~l~fpl 157 (252)
+...+...++++.|+.++.++.. ....++...++.++.|+.
T Consensus 45 pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ 100 (176)
T 2fpr_A 45 PGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDE 100 (176)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred ccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeE
Confidence 34445566678899999999987 346777888888988863
No 329
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=33.95 E-value=86 Score=22.71 Aligned_cols=53 Identities=9% Similarity=0.064 Sum_probs=38.5
Q ss_pred hHHHHHhCCCEEEEEecCCH----HHHHHHHHHcCCcceeeecCChHHHHHcCCccc
Q 025441 122 KKDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 122 ~~~~~~~~Gv~vVaVs~d~~----~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~ 174 (252)
....++...+.+|.+..|-. ..+..+++++++|+-.|.+...++-++.|....
T Consensus 30 v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~~~ 86 (104)
T 4a18_G 30 TIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVELGTACGKYHR 86 (104)
T ss_dssp HHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCSSC
T ss_pred HHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHhCCccC
Confidence 34456666788999988754 345566777788876577888899999997654
No 330
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=33.54 E-value=94 Score=22.74 Aligned_cols=52 Identities=4% Similarity=-0.102 Sum_probs=38.6
Q ss_pred HHHHHhCCCEEEEEecCCHH----HHHHHHHHcCCcceeeecCChHHHHHcCCccc
Q 025441 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 123 ~~~~~~~Gv~vVaVs~d~~~----~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~ 174 (252)
...++..-+.+|.|..|-+. .+..+++++++|+-.+.+...++-++.|....
T Consensus 30 ~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG~a~G~~~~ 85 (110)
T 3cpq_A 30 IKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLELGAVCGKPFP 85 (110)
T ss_dssp HHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHHHHHHTTCSSC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHHHHHHhCCccc
Confidence 34455566889999988653 45567788888876776888899999998643
No 331
>3hug_B Probable conserved membrane protein; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=32.63 E-value=23 Score=26.69 Aligned_cols=24 Identities=21% Similarity=0.396 Sum_probs=20.0
Q ss_pred CCCHhhHHHHHHHHHhHHHHHhCC
Q 025441 107 FGCVLCRKRADYLAAKKDVMDASG 130 (252)
Q Consensus 107 ~~Cp~C~~el~~L~~~~~~~~~~G 130 (252)
..|+-|+.++.+|++....+....
T Consensus 52 a~Cp~CR~ev~eL~~~~a~L~~l~ 75 (108)
T 3hug_B 52 AGCPECRGAVTELCGVPALLSQLD 75 (108)
T ss_dssp HTCHHHHHHHHHHTTHHHHHTTSC
T ss_pred HhCHHHHHHHHHHHHHHHHHhcCC
Confidence 479999999999999888776543
No 332
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=30.79 E-value=37 Score=23.12 Aligned_cols=28 Identities=21% Similarity=0.224 Sum_probs=24.2
Q ss_pred EEEEecCCHHHHHHHHHHcCCcceeeec
Q 025441 133 LVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 133 vVaVs~d~~~~~~~f~~~~~l~fpllsD 160 (252)
=|.|.+......+++.++++++|.++.+
T Consensus 42 di~V~p~~~~~f~~~L~~~~i~~~v~i~ 69 (79)
T 1vjq_A 42 VILIPSDMVEWFLEMLKAKGIPFTVYVE 69 (79)
T ss_dssp EEEECGGGHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEECHHHHHHHHHHHHHCCCcEEEEeh
Confidence 3678999889999999999999998754
No 333
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=30.18 E-value=1.3e+02 Score=25.99 Aligned_cols=64 Identities=8% Similarity=-0.039 Sum_probs=40.7
Q ss_pred eEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh-CCCEEEEEecCCHHHHHH-HHHHcCCc--ce--eeecC
Q 025441 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQART-FSEQTKFK--GE--VYADP 161 (252)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~-~Gv~vVaVs~d~~~~~~~-f~~~~~l~--fp--llsDp 161 (252)
+..+++|-..+|+.|.+.+..|.+...+++. ..+..+.|..+.-..... |.+.+|+. +| ++.+.
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~~~P~~~i~~~ 315 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNV 315 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCTTSCEEEEEES
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCCCccCCcEEEEec
Confidence 4444456678999999999999999888874 456677776654332221 22555554 45 34555
No 334
>1dnp_A DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon, lyase (carbon-carbon); HET: DNA FAD MHF; 2.30A {Escherichia coli} SCOP: a.99.1.1 c.28.1.1
Probab=30.18 E-value=97 Score=28.70 Aligned_cols=63 Identities=10% Similarity=0.141 Sum_probs=42.8
Q ss_pred CeEEEEEEcCCC------CH--hhHHHHHHHHHhHHHHHhCCCEEEEEec----CCHHHHHHHHHHcCCcceeeec
Q 025441 97 RKAVVAFARHFG------CV--LCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 97 ~~vVLvF~R~~~------Cp--~C~~el~~L~~~~~~~~~~Gv~vVaVs~----d~~~~~~~f~~~~~l~fpllsD 160 (252)
++++.+|..-.. .. --.--+..|+++..+|++.|..++.+.. +..+.+.++++++++.- |+.|
T Consensus 28 ~~v~~vfi~dp~~~~~~~~~~~r~~fl~~sL~~L~~~L~~~G~~L~v~~~~~~g~~~~~l~~l~~~~~~~~-v~~~ 102 (471)
T 1dnp_A 28 ARVLALYIATPRQWATHNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTH-LFYN 102 (471)
T ss_dssp SEEEEEEEECHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHHHTCCE-EEEE
T ss_pred CCEEEEEEECchhhccCCCCHHHHHHHHHHHHHHHHHHHHCCCeEEEEEccCCCCHHHHHHHHHHHcCCCE-EEEe
Confidence 477777764321 11 1223467788888999999999999843 34467888999988763 5553
No 335
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=30.13 E-value=35 Score=29.88 Aligned_cols=66 Identities=11% Similarity=0.184 Sum_probs=45.1
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHH-HhHH---HHHhCCCEEEEEecCCHH
Q 025441 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLA-AKKD---VMDASGVALVLIGPGSVE 142 (252)
Q Consensus 68 ~~~~g~~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~-~~~~---~~~~~Gv~vVaVs~d~~~ 142 (252)
..+-.+.+|-|++.|.+|.++-..+ +++.+.++| ++++++.++- ++.. .-.+.+++|+.|+-+...
T Consensus 70 I~EKL~~VPVF~Itn~~G~Pll~~~--~~~~V~~fF-------~s~~DA~a~L~el~k~~~~~~~~~~kV~pvsL~kvy 139 (279)
T 4e6z_A 70 IEEKLEVIPVFLITNYNSSPYIFQE--NEKQVCYMF-------LCPYDAENMLNDMIKYNGMKYNGNIKIHNITMKKAY 139 (279)
T ss_dssp HHHHSTTSEEEEEECTTCCBCCEEE--TTEEEEEEE-------SSHHHHHHHHHHHHHHCHHHHTTSCEEEEEEHHHHH
T ss_pred HHHHhcCCCEEEEEcCCCCEEEecC--CCCeEEEEE-------CCHHHHHHHHHHHHhccCcccccCceEEEecHHHHH
Confidence 4577889999999999999876543 344455555 4677777653 3321 112568999999988663
No 336
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=29.88 E-value=1.2e+02 Score=21.02 Aligned_cols=52 Identities=10% Similarity=0.089 Sum_probs=37.1
Q ss_pred HHHHHhCCCEEEEEecCCHH----HHHHHHHHcCCcceeeecCChHHHHHcCCcccc
Q 025441 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (252)
Q Consensus 123 ~~~~~~~Gv~vVaVs~d~~~----~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~~ 175 (252)
...+++..+++|.|..|-.+ .+..+++++++|+-.+. ...++-++.|.....
T Consensus 20 ~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~-sk~eLG~a~Gk~~~~ 75 (82)
T 3v7e_A 20 VKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVE-SMKKLGKACGIEVGA 75 (82)
T ss_dssp HHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES-CHHHHHHHHTCSSCC
T ss_pred HHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC-CHHHHHHHhCCCCCE
Confidence 44556667889999887543 45567788899986554 667888888876543
No 337
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=29.87 E-value=1.2e+02 Score=28.01 Aligned_cols=58 Identities=9% Similarity=0.031 Sum_probs=43.5
Q ss_pred HHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcceeeecCC---------hHHHHHcCCc
Q 025441 114 KRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPN---------HSSYEALSFV 172 (252)
Q Consensus 114 ~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpllsDp~---------~~ly~alGv~ 172 (252)
-.+..|+++.++|++.|..++.+..+..+.+.++++++++.- |+.+.+ .++.+++|+.
T Consensus 89 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~-V~~~~~~~~~~~~~~~~v~~~lgi~ 155 (482)
T 2xry_A 89 FMLKGLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAGT-LVTDFSPLRIKNQWIEKVISGISIP 155 (482)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSE-EEEECCCSHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHHHcCCCE-EEEecccchhHHHHHHHHHHHcCCE
Confidence 346788888999999999999887666688999999988763 444432 3456667774
No 338
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=29.85 E-value=97 Score=29.28 Aligned_cols=46 Identities=7% Similarity=-0.024 Sum_probs=36.6
Q ss_pred HHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcceeeec
Q 025441 114 KRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 114 ~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpllsD 160 (252)
-.+..|+++..+|++.|..++.+..+..+.+.++++++++.- |+.+
T Consensus 86 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~-v~~~ 131 (543)
T 2wq7_A 86 FLQQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVEM-LTFE 131 (543)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHTTEEE-EEEE
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCE-EEEe
Confidence 356788888999999999999887666688899999988753 4444
No 339
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=29.58 E-value=78 Score=23.93 Aligned_cols=35 Identities=9% Similarity=0.100 Sum_probs=28.6
Q ss_pred HHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 120 ~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
.+...++++.|..++.++.++...++...++.++.
T Consensus 90 ~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~ 124 (216)
T 2pib_A 90 REALEFVKSKRIKLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChH
Confidence 34456677899999999999888888888888876
No 340
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=29.10 E-value=1e+02 Score=22.85 Aligned_cols=52 Identities=12% Similarity=0.045 Sum_probs=39.4
Q ss_pred HHHHHhCCCEEEEEecCCHH----HHHHHHHHcCCcceeeecCChHHHHHcCCccc
Q 025441 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 123 ~~~~~~~Gv~vVaVs~d~~~----~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~ 174 (252)
...++.-.+.+|.|..|-++ .+..+++.+++|+-.+.+...++-++.|....
T Consensus 35 ~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~A~Gk~~~ 90 (112)
T 3iz5_f 35 LKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKYYR 90 (112)
T ss_dssp HHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTHHHHHCTTCS
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHHHhCCccc
Confidence 44555666889999887653 55667899999887776888899999998644
No 341
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=28.07 E-value=83 Score=26.32 Aligned_cols=52 Identities=12% Similarity=0.133 Sum_probs=33.1
Q ss_pred HhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc--ce-eeecCChHHHHHcCCc
Q 025441 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GE-VYADPNHSSYEALSFV 172 (252)
Q Consensus 121 ~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~--fp-llsDp~~~ly~alGv~ 172 (252)
+....+++.|+.+..++.++...++...+..++. |. ++.+......+.++..
T Consensus 170 ~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~K~~~~~~l~~~ 224 (287)
T 3a1c_A 170 PAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK 224 (287)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT
T ss_pred HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecChHHHHHHHHHHhcC
Confidence 3445567788888888888777777777777765 22 3333344455556554
No 342
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=27.95 E-value=18 Score=28.78 Aligned_cols=60 Identities=7% Similarity=0.042 Sum_probs=34.7
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc-ceeeecCChHHH
Q 025441 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GEVYADPNHSSY 166 (252)
Q Consensus 100 VLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~-fpllsDp~~~ly 166 (252)
++-.|-+..||+|++-.-.|.+ .....+++-|...+. -..|.+.+... .|++.|.+..++
T Consensus 3 Mm~LY~~~~sP~~~rvr~~L~e-----~gi~~e~~~v~~~~~--~~~~~~~nP~g~vPvL~~~~~~l~ 63 (210)
T 4hoj_A 3 MMTLYSGITCPFSHRCRFVLYE-----KGMDFEIKDIDIYNK--PEDLAVMNPYNQVPVLVERDLVLH 63 (210)
T ss_dssp -CEEEECTTCHHHHHHHHHHHH-----HTCCCEEEECCTTSC--CHHHHHHCTTCCSCEEEETTEEEE
T ss_pred eEEEecCCCChHHHHHHHHHHH-----cCCCCEEEEeCCCCC--CHHHHHHCCCCCCcEEEECCEEEe
Confidence 3446777899999976555432 233345666654432 23466665543 678888765443
No 343
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=27.45 E-value=86 Score=24.89 Aligned_cols=40 Identities=18% Similarity=0.095 Sum_probs=31.0
Q ss_pred HHHHHhHHHHHhCCCEEEEEecCC---------------HHHHHHHHHHcCCcce
Q 025441 117 DYLAAKKDVMDASGVALVLIGPGS---------------VEQARTFSEQTKFKGE 156 (252)
Q Consensus 117 ~~L~~~~~~~~~~Gv~vVaVs~d~---------------~~~~~~f~~~~~l~fp 156 (252)
+...+...++++.|+.++.++..+ .+.++...++.++.|.
T Consensus 53 pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~ 107 (211)
T 2gmw_A 53 DGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD 107 (211)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred cCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceE
Confidence 344556677788999999999988 3677778888888765
No 344
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=27.37 E-value=80 Score=25.14 Aligned_cols=36 Identities=8% Similarity=0.051 Sum_probs=26.4
Q ss_pred cceEEEEeCCCCeEEEEEe---CCCCCCCCCHHHHHHHhh
Q 025441 215 QGGIIVAGPGKSNISYIHR---DKEAGDDPDIQDILKACC 251 (252)
Q Consensus 215 ~gg~fVid~ggg~I~~~h~---~~~~~D~~~~~eIL~al~ 251 (252)
.|..++++++ |++.|... .....+.+...++|+.++
T Consensus 105 ~Pt~v~l~~d-G~~v~~~ty~p~~~~~~~~~f~~~L~~v~ 143 (173)
T 3ira_A 105 WPLNIIMTPG-KKPFFAGTYIPKNTRFNQIGMLELVPRIK 143 (173)
T ss_dssp SSEEEEECTT-SCEEEEESSCCSSCBTTBCCHHHHHHHHH
T ss_pred CcceeeECCC-CCceeeeeeCCCCcCCCCCCHHHHHHHHH
Confidence 6789999998 69998742 223456788999888764
No 345
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=27.12 E-value=2.4e+02 Score=24.45 Aligned_cols=60 Identities=12% Similarity=0.209 Sum_probs=42.6
Q ss_pred HHHHHHhHHHHHhCCCEEEEEec--CCHHHHHHHHHHcCCcceeeecC------ChHHHHHcCCcccc
Q 025441 116 ADYLAAKKDVMDASGVALVLIGP--GSVEQARTFSEQTKFKGEVYADP------NHSSYEALSFVSGV 175 (252)
Q Consensus 116 l~~L~~~~~~~~~~Gv~vVaVs~--d~~~~~~~f~~~~~l~fpllsDp------~~~ly~alGv~~~~ 175 (252)
+.+.-+....+.+.|+..|.+-. .+.+.+++|.+...-+.|++.-+ +.+-.+++|+..-.
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~ 236 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVI 236 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEE
Confidence 45555556678899999999964 45789999999987556766543 34556778877654
No 346
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=27.07 E-value=94 Score=28.28 Aligned_cols=58 Identities=24% Similarity=0.162 Sum_probs=43.4
Q ss_pred HHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcceeeecCC---------hHHHHHcCCc
Q 025441 114 KRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPN---------HSSYEALSFV 172 (252)
Q Consensus 114 ~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpllsDp~---------~~ly~alGv~ 172 (252)
-.+..|+++.++|++.|..++.+..+..+.+.++++++++.- |++|.+ ..+.+.+|+.
T Consensus 49 fl~~sL~~l~~~L~~~g~~l~~~~g~~~~~l~~l~~~~~~~~-v~~~~~~~~~~~~rd~~v~~~l~i~ 115 (420)
T 2j07_A 49 WFLENVRALREAYRARGGALWVLEGLPWEKVPEAARRLKAKA-VYALTSHTPYGRYRDGRVREALPVP 115 (420)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSE-EEEECCCSHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCE-EEEecccChhHHHHHHHHHHHcCCe
Confidence 356778888999999999999887666688999999988763 555433 4555666654
No 347
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=26.29 E-value=86 Score=24.21 Aligned_cols=33 Identities=9% Similarity=0.184 Sum_probs=29.2
Q ss_pred hHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 122 ~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
...++++.|+.+..++.++...++.+.++.++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~ 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe
Confidence 466778999999999998888999999999988
No 348
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=26.15 E-value=87 Score=23.61 Aligned_cols=36 Identities=8% Similarity=0.132 Sum_probs=29.6
Q ss_pred HHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 119 L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
..+...++++.|+.++.++..+...++...+..++.
T Consensus 94 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 129 (214)
T 3e58_A 94 VLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQ 129 (214)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcH
Confidence 445566778899999999999888888888888874
No 349
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=25.91 E-value=55 Score=25.69 Aligned_cols=37 Identities=11% Similarity=0.149 Sum_probs=29.5
Q ss_pred HHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcc
Q 025441 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (252)
Q Consensus 119 L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~f 155 (252)
..+....+++.|+.+..|+.++...++...+++++..
T Consensus 91 ~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~ 127 (225)
T 1nnl_A 91 IRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA 127 (225)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCc
Confidence 3445666778899999999888888888888888863
No 350
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=25.41 E-value=1.2e+02 Score=24.36 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=29.3
Q ss_pred HHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcceee
Q 025441 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVY 158 (252)
Q Consensus 119 L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpll 158 (252)
..+...++++.|+.++.++-.+...+..+.+..+++.+++
T Consensus 25 ~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i 64 (231)
T 1wr8_A 25 ALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVV 64 (231)
T ss_dssp HHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEE
Confidence 3444556678899998888777788888888888775433
No 351
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=24.78 E-value=1.3e+02 Score=26.65 Aligned_cols=60 Identities=12% Similarity=0.048 Sum_probs=39.8
Q ss_pred HHHHHHHhHHHHHhCCCE-EEEEecCC------H-HHHHHHHHHcCCcceeeecCChHHHHHcCCccc
Q 025441 115 RADYLAAKKDVMDASGVA-LVLIGPGS------V-EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 115 el~~L~~~~~~~~~~Gv~-vVaVs~d~------~-~~~~~f~~~~~l~fpllsDp~~~ly~alGv~~~ 174 (252)
-+..|.+..+.+++.|++ +.+|.+.. . +.++.-.+++|++..|++-.+..-|..+|+...
T Consensus 71 ~~~aL~~f~~~~~~~~v~~v~~vATsA~R~A~N~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~ 138 (343)
T 3cer_A 71 AYVAAREFAGVIAEHPIDGLRFVATSATRDAENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSV 138 (343)
T ss_dssp HHHHHHHHHHHHTTSCCSEEEEEECHHHHHCTTHHHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhh
Confidence 344555556666677875 77777632 2 455566677899999998877777766665443
No 352
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=24.45 E-value=1.3e+02 Score=23.55 Aligned_cols=58 Identities=7% Similarity=0.002 Sum_probs=35.9
Q ss_pred CCc-EEecCCCCeEeCCCccC--CCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec
Q 025441 76 DTV-KVYDVNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 76 pdf-~L~d~~G~~v~ls~l~~--~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~ 138 (252)
.++ .+.+.+|..+....+.. +.+.+|+|+.+.++..- .+....+.|.+.|..|+++..
T Consensus 17 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 17 QDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp GGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHHTTEEEEEECC
T ss_pred CCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhh-----HHHHHHHHHHhCCCcEEEeCC
Confidence 344 56677887776544321 23567777788765322 223445566778999999964
No 353
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=24.08 E-value=99 Score=24.43 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=26.5
Q ss_pred EEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEe
Q 025441 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs 137 (252)
|.+|.-+-||+|..-.+.|.++.+++ +++|.-..
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~---~~~v~~~p 36 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDY---GLTIRYNA 36 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHH---CCEEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHc---CCeEEEEe
Confidence 56777899999999999998877765 56665543
No 354
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=23.69 E-value=1.2e+02 Score=23.28 Aligned_cols=35 Identities=6% Similarity=-0.004 Sum_probs=29.1
Q ss_pred HhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcc
Q 025441 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (252)
Q Consensus 121 ~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~f 155 (252)
+...++++.|+.++.++..+...++.+.++.++..
T Consensus 42 ~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~ 76 (180)
T 1k1e_A 42 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL 76 (180)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce
Confidence 35566788999999999998888899999988763
No 355
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=23.42 E-value=46 Score=27.01 Aligned_cols=21 Identities=33% Similarity=0.344 Sum_probs=17.7
Q ss_pred CCCHhhHHHHHHHHHhHHHHH
Q 025441 107 FGCVLCRKRADYLAAKKDVMD 127 (252)
Q Consensus 107 ~~Cp~C~~el~~L~~~~~~~~ 127 (252)
..|+-|+.++.+|++....+-
T Consensus 33 ~~C~~Cr~~v~~l~~~~~~l~ 53 (195)
T 2q1z_B 33 SLCDECRARAGALDAVGGSLM 53 (195)
T ss_dssp HHCHHHHHHHHHHHHHHHHHH
T ss_pred hHCHHHHHHHHHHHHHHHHHh
Confidence 369999999999999876654
No 356
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=23.13 E-value=45 Score=23.76 Aligned_cols=39 Identities=8% Similarity=-0.007 Sum_probs=28.3
Q ss_pred HHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 115 el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
-.+...+...++++.|+.++.++..+...++...++.++
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 345666777888899999999998776655555555544
No 357
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=22.98 E-value=4.9 Score=23.02 Aligned_cols=20 Identities=15% Similarity=0.205 Sum_probs=15.6
Q ss_pred CCHhhHHHHHHHHHhHHHHH
Q 025441 108 GCVLCRKRADYLAAKKDVMD 127 (252)
Q Consensus 108 ~Cp~C~~el~~L~~~~~~~~ 127 (252)
-||.|+.+++++..+..-|+
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHH
Confidence 59999999998877665554
No 358
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=22.81 E-value=65 Score=24.09 Aligned_cols=29 Identities=17% Similarity=0.188 Sum_probs=23.5
Q ss_pred EEEecCCHHHHHHHHHHcCCcceeeecCC
Q 025441 134 VLIGPGSVEQARTFSEQTKFKGEVYADPN 162 (252)
Q Consensus 134 VaVs~d~~~~~~~f~~~~~l~fpllsDp~ 162 (252)
|.+.-++.+.+.+|++++|++|.|.-...
T Consensus 54 v~L~F~skE~AiayAek~G~~y~V~ep~~ 82 (106)
T 2jya_A 54 VKLTFETQEQAEAYAQRKGIEYRVILPKE 82 (106)
T ss_dssp EEEEESSHHHHHHHHHHHTCEEEECCCTT
T ss_pred ceEecCCHHHHHHHHHHcCCEEEEeCCCc
Confidence 45667888999999999999998875433
No 359
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=22.75 E-value=91 Score=24.15 Aligned_cols=38 Identities=5% Similarity=0.039 Sum_probs=30.2
Q ss_pred HHHHHhHHHHHhCCCEEEEEecCCH---HHHHHHHHHcCCc
Q 025441 117 DYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKFK 154 (252)
Q Consensus 117 ~~L~~~~~~~~~~Gv~vVaVs~d~~---~~~~~f~~~~~l~ 154 (252)
+...+...++++.|+.+..++..+. +.++...++.++.
T Consensus 37 ~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 37 KNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp TTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred cCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 4455667778889999999997665 7888888998875
No 360
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=22.54 E-value=1.9e+02 Score=19.77 Aligned_cols=56 Identities=11% Similarity=0.038 Sum_probs=35.7
Q ss_pred CeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHh--CCCEEEEEecCCH--HHHHHHHHHcCCcceee
Q 025441 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSV--EQARTFSEQTKFKGEVY 158 (252)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~--~Gv~vVaVs~d~~--~~~~~f~~~~~l~fpll 158 (252)
.+...+-.|+--||.--..+. ..+++ .|-.+.++..+.. +.+..|+++.|+.+...
T Consensus 8 ~~~~~lD~rGl~CP~Pvl~~k------kal~~l~~G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~ 67 (82)
T 3lvj_C 8 SPDHTLDALGLRCPEPVMMVR------KTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAK 67 (82)
T ss_dssp CCSEEEECTTCCTTHHHHHHH------HHHHTSCTTCEEEEEECCTTHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEECCCCCCCHHHHHHH------HHHHhCCCCCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 345678899999998644332 33333 3544544444433 58899999988877543
No 361
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=22.42 E-value=1e+02 Score=28.53 Aligned_cols=46 Identities=11% Similarity=0.097 Sum_probs=36.8
Q ss_pred HHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcceeeec
Q 025441 114 KRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 114 ~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpllsD 160 (252)
-.+..|+++..+|++.|..++.+..+..+.+.++++++++. .|+.+
T Consensus 62 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~V~~~ 107 (489)
T 1np7_A 62 FLQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAK-TIYYH 107 (489)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTEE-EEEEE
T ss_pred HHHHHHHHHHHHHHHCCCcEEEEECCHHHHHHHHHHHcCCC-EEEEe
Confidence 45678888899999999999988766668889999998875 35555
No 362
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=22.31 E-value=1.6e+02 Score=24.07 Aligned_cols=60 Identities=7% Similarity=-0.013 Sum_probs=37.2
Q ss_pred CCCCc-EEecCCCCeEeCCCcc--CCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEec
Q 025441 74 LLDTV-KVYDVNGNAIPISDLW--KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 74 ~apdf-~L~d~~G~~v~ls~l~--~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~ 138 (252)
...++ .+...+|..+....+. ++.+.+|+|+.+.++..- .+..+.+.|.+.|..|+++..
T Consensus 33 ~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~-----~~~~~~~~l~~~g~~vi~~D~ 95 (342)
T 3hju_A 33 PYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 95 (342)
T ss_dssp BTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHTTTEEEEEECC
T ss_pred ccccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccc-----hHHHHHHHHHhCCCeEEEEcC
Confidence 44555 6777888777654432 223456777777765332 233445667778999999954
No 363
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=22.15 E-value=2.1e+02 Score=20.39 Aligned_cols=50 Identities=8% Similarity=0.002 Sum_probs=36.8
Q ss_pred HHHHHhCCCEEEEEecCCHH----HHHHHHHHcCCcceeeecCChHHHHHcCCcc
Q 025441 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 123 ~~~~~~~Gv~vVaVs~d~~~----~~~~f~~~~~l~fpllsDp~~~ly~alGv~~ 173 (252)
...++...+.+|.|..|-.+ .+..+++.+++|+-.+ ....++-.++|...
T Consensus 28 ~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~-~s~~eLG~A~Gk~~ 81 (101)
T 3v7q_A 28 IKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKV-ESRAVLGRSIGKEA 81 (101)
T ss_dssp HHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEE-SCHHHHHHHTTSSC
T ss_pred HHHHhcCceeEEEEeccccccchhhhcccccccCCCeeee-chHHHHHhhhCccc
Confidence 44556667889999987543 4555678888988655 67788999999863
No 364
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=22.10 E-value=2e+02 Score=20.28 Aligned_cols=44 Identities=27% Similarity=0.149 Sum_probs=26.4
Q ss_pred HHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc--ceeeecC
Q 025441 116 ADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GEVYADP 161 (252)
Q Consensus 116 l~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~--fpllsDp 161 (252)
+..|...+.++++.|..++.++.. ..+++..+..++. |+++.|.
T Consensus 60 l~~L~~~~~~~~~~g~~l~l~~~~--~~v~~~l~~~gl~~~~~i~~~~ 105 (117)
T 4hyl_A 60 LRVLLSLYRHTSNQQGALVLVGVS--EEIRDTMEITGFWNFFTACASM 105 (117)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCC--HHHHHHHHHHTCGGGCEEESCH
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHhCccceeeecCCH
Confidence 455666666677777777777664 2445555555654 5555443
No 365
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=22.03 E-value=1.1e+02 Score=28.42 Aligned_cols=45 Identities=16% Similarity=0.216 Sum_probs=36.6
Q ss_pred HHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcceeeec
Q 025441 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 115 el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fpllsD 160 (252)
.+..|+++..+|++.|..++.+..+..+.+.++++++++.- |+.+
T Consensus 55 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~-v~~~ 99 (484)
T 1owl_A 55 LQGCLQELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAEA-VYWN 99 (484)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEESCHHHHHHHHHHHTTCSE-EEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCE-EEEe
Confidence 46778888899999999999987666688999999988764 5553
No 366
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=21.89 E-value=1.1e+02 Score=23.47 Aligned_cols=35 Identities=14% Similarity=0.094 Sum_probs=26.7
Q ss_pred HHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 120 ~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
.+..+++++.|+.++.++......++...+..++.
T Consensus 76 ~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 110 (205)
T 3m9l_A 76 VELVRELAGRGYRLGILTRNARELAHVTLEAIGLA 110 (205)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCch
Confidence 34456677888999888888888888888887764
No 367
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=21.83 E-value=1e+02 Score=19.56 Aligned_cols=56 Identities=16% Similarity=0.219 Sum_probs=34.2
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEE---------EEEecC----CHHHHHHHHHHcCCcceeeec
Q 025441 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVAL---------VLIGPG----SVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 100 VLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~v---------VaVs~d----~~~~~~~f~~~~~l~fpllsD 160 (252)
+.+...+..|..|...+...-+.. .|+.- +.|..+ +.+.+.+-.++.|++..++.|
T Consensus 4 ~~~~v~gm~C~~C~~~ie~~l~~~-----~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (74)
T 3dxs_X 4 IQVGVTGMTCAACSNSVEAALMNV-----NGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE 72 (74)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTS-----TTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred EEEEECCcCCHHHHHHHHHHHhcC-----CCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence 456678899999998776543221 23322 223221 456777777888887766665
No 368
>3dex_A SAV_2001; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Streptomyces avermitilis} SCOP: c.47.1.0
Probab=21.79 E-value=34 Score=25.71 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=27.1
Q ss_pred cceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025441 215 QGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 215 ~gg~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 251 (252)
.||.|.|.-+ |+++|.-. -+.-|+.++|.+.++
T Consensus 53 ~gG~FeV~vd-g~lVwsRk---~gGFPd~keLkq~VR 85 (107)
T 3dex_A 53 TGGVFVVRVD-DEVVWDRR---EQGFPEPTAVKRLVR 85 (107)
T ss_dssp SSSCEEEEET-TEEEEEHH---HHCSCCHHHHHHHHH
T ss_pred CCceEEEEEC-CEEEEEec---CCCCCCHHHHHHHHH
Confidence 5788988777 59999886 567899999998876
No 369
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.36 E-value=50 Score=26.50 Aligned_cols=83 Identities=7% Similarity=0.011 Sum_probs=57.7
Q ss_pred CCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCHhhHHHHHHHHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 025441 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 74 ~apdf~L~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l 153 (252)
.+-.+++.+. | +++.+.-...+-+||.+-+-.=|.+.-...+.+++.+++-+.+-++|+|.-.+.-+-..|-++ +
T Consensus 64 ~a~~l~~~~~-G--~~~~~~~~~~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCFms~F~kagW~~~--I 138 (157)
T 2r47_A 64 KARKLEVTEY-G--VELGEISPGNVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCYMDMFARAGWYEL--L 138 (157)
T ss_dssp GCEEEEEETT-E--EEEEEECCCCEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEETTHHHHTTHHHH--S
T ss_pred HceEEEEecC-c--eEeccccCCCCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEhHHHHHHcCCCcc--C
Confidence 3445555552 3 454554324677888887776666666777777777776555778999999998777778776 7
Q ss_pred cceeeecC
Q 025441 154 KGEVYADP 161 (252)
Q Consensus 154 ~fpllsDp 161 (252)
+|+.+.|.
T Consensus 139 dFD~iID~ 146 (157)
T 2r47_A 139 DFDCVINA 146 (157)
T ss_dssp CCSEEEEE
T ss_pred CccEEEEc
Confidence 88888774
No 370
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=21.06 E-value=1.9e+02 Score=23.91 Aligned_cols=39 Identities=13% Similarity=0.041 Sum_probs=28.5
Q ss_pred HhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCcceeee
Q 025441 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA 159 (252)
Q Consensus 121 ~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~fplls 159 (252)
+...++++.|+.++.++--+...+..+.++.+++.++++
T Consensus 28 ~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~ 66 (288)
T 1nrw_A 28 NALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVIS 66 (288)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEE
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEE
Confidence 334556788999887777777788888888888766443
No 371
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=21.04 E-value=2.6e+02 Score=21.69 Aligned_cols=22 Identities=14% Similarity=0.345 Sum_probs=16.3
Q ss_pred HHHhHHHHHhCCCEEEEEecCC
Q 025441 119 LAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 119 L~~~~~~~~~~Gv~vVaVs~d~ 140 (252)
+.+....+++.|+.|.+|+.++
T Consensus 128 ~~~~~~~~~~~~i~v~~igig~ 149 (218)
T 3ibs_A 128 AVEAAKAAAEKGIQVSVLGVGM 149 (218)
T ss_dssp HHHHHHHHHTTTEEEEEEEESC
T ss_pred HHHHHHHHHhcCCEEEEEEecC
Confidence 3444556678899999988876
No 372
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=21.02 E-value=44 Score=25.94 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=28.6
Q ss_pred CcEEecCCCCeEeCCCccCCCeEEEEEEcC-CCCHhhHHHHHHHHHhHH
Q 025441 77 TVKVYDVNGNAIPISDLWKDRKAVVAFARH-FGCVLCRKRADYLAAKKD 124 (252)
Q Consensus 77 df~L~d~~G~~v~ls~l~~~~~vVLvF~R~-~~Cp~C~~el~~L~~~~~ 124 (252)
.+++.|..|+.+-+ .+ .|-|- .|||.|..+|.++.+.+.
T Consensus 24 ~v~l~d~~Gk~vll-~F--------~~t~Cp~~Cp~~~~~l~~l~~~~~ 63 (170)
T 4hde_A 24 PFGTKDLKGKVWVA-DF--------MFTNCQTVCPPMTANMAKLQKMAK 63 (170)
T ss_dssp EEEHHHHTTSCEEE-EE--------ECTTCSSSHHHHHHHHHHHHHHHH
T ss_pred EEeHHHhCCCEEEE-EE--------ECCCCCCcccHHHHHHHHHHHhhh
Confidence 46788888986644 23 34454 699999999999988653
No 373
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=20.76 E-value=2.7e+02 Score=22.44 Aligned_cols=38 Identities=16% Similarity=-0.059 Sum_probs=29.1
Q ss_pred HHHHHhHHHHHhCCC--EEEEEecCCHHHHHHHHHHcCCc
Q 025441 117 DYLAAKKDVMDASGV--ALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 117 ~~L~~~~~~~~~~Gv--~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
+.+.+....+++.|+ .+..++......++...+..++.
T Consensus 145 p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~ 184 (282)
T 3nuq_A 145 IPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIA 184 (282)
T ss_dssp HHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCT
T ss_pred hhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcc
Confidence 345555677788899 99999988887788877777764
No 374
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=20.67 E-value=95 Score=23.96 Aligned_cols=35 Identities=11% Similarity=0.220 Sum_probs=26.9
Q ss_pred HHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 120 ~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
.+...++++.|+.++.++..+.+.++...+..++.
T Consensus 97 ~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 97 VELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp HHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 34456677888999999888888888888887764
No 375
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.50 E-value=2.6e+02 Score=20.53 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=35.3
Q ss_pred HHHHHhHHHH-HhCCCEEEEEecCCHH---HHHHHHHHcCCcce-eeecCChHHHHHc
Q 025441 117 DYLAAKKDVM-DASGVALVLIGPGSVE---QARTFSEQTKFKGE-VYADPNHSSYEAL 169 (252)
Q Consensus 117 ~~L~~~~~~~-~~~Gv~vVaVs~d~~~---~~~~f~~~~~l~fp-llsDp~~~ly~al 169 (252)
++|.+..+++ +..++.+++|-.|+.+ .+-.|.+..|...- ++.|.+..-.+.|
T Consensus 36 qelkdsieelvkkynativvvvvddkewaekairfvkslgaqvliiiydqdqnrleef 93 (134)
T 2l69_A 36 QELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQDQNRLEEF 93 (134)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEEEECSCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEEEEeCchhHHHHH
Confidence 4455544443 4568888888888764 55578888887754 6788887655544
No 376
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=20.10 E-value=1.2e+02 Score=23.76 Aligned_cols=36 Identities=8% Similarity=0.216 Sum_probs=28.3
Q ss_pred HHHhHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCc
Q 025441 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 119 L~~~~~~~~~~Gv~vVaVs~d~~~~~~~f~~~~~l~ 154 (252)
..+...++++.|+.+..++.++...++...++.++.
T Consensus 88 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 88 IPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH
Confidence 344456677889999999998888888888888865
Done!