Citrus Sinensis ID: 025443

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250--
Protein Sequence
MKDAPRKHKHKHKHPAVLAAQVQVLPLRFLLACAVLALRAPIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIIDKIEERNLAEIPLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQSFLYINP
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHcccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccEEccccccccEEEEEEEcccccEEEEEEEcccccEEEEEEcccccHHHHHHHHHHHHHccccccEEEEccEEccccccccEEEEEccccccHHHHccccccHHHHHHHHHHHHHHHHHHHHccEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEEEccccccHHccccccccccccccccHHHHccHHHHcHHHcccccccHHHEEEEEEEEEcccEEEEEEEEcccccEEEEEEEccccHHHHHHHHHHHHHccccccEccEEEEEEccccccEEEEEEccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEccc
Coil and Loop (DISEMBL)
mkdaprkhkhkhkhpAVLAAQVQVLPLRFLLACAVLALRapiahhpilrtpcrsstynlNIITDTIAATTVVYEGAIIDKIeernlaeiplpamskarvytdvnvlrpkeywdyesltvqwgdqddyEVVRKVGRGKYSEVFEGinvntnerCIIKILKPVKKKKIKREIKILQNlcggpnvvKLLDIVRdqhsktpsLIFEYVNstdfkvlyptltdyDIRYYIYELLKVMSIFIRWSTVLCYQSFLYINP
Flexible Loop (DISEMBL)
mkdaprkhkhkhkhpavlAAQVQVLPLRFLLACAVLALRAPIahhpilrtpcrssTYNLNIITDTIAATTVVYEGAIIDKIEernlaeiplpamskarvyTDVNVLRPKEYWdyesltvqwgdqddYEVVRKVGRGKYSevfeginvntnerciikilkpvkkkkiKREIKIlqnlcggpnvVKLLDIVRDQHSKTPSLifeyvnstdfkvlYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQSFLYINP
Low Complexity Region (SEG)
MKDAPRkhkhkhkhPAVLAAQVQVLPLRFLLACAVLALRAPIAHHPILRTPCRSSTYNLNiitdtiaattVVYEGAIIDKIEERNLAEIPLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCiikilkpvkkkkikreikiLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQSFLYINP
Disordered region (IsUnstruct)
***************AVLAAQVQVLPLRFLLACAVLALRAPIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIIDKIEERNLAEIPLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQSFLYI**
Disordered Region (DISOPRED)
******************AAQVQVLPLRFLLACAV***************************************************************VYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQSFLYIN*
Disordered Region (DISEMBL)
***************AVLAAQVQVLPLRFLLACAVLALRAPIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIIDKIEERNLAEIPLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQSFLYINP
Disordered Region (DISPRO)
************KHPAVLAAQVQVLPLRFLLACAVLALRAPIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIIDKIEERNLAEIPLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQSFLYINP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKDAPRKHKHKHKHPAVLAAQVQVLPLRFLLACAVLALRAPIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIIDKIEERNLAEIPLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQSFLYINP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	252	2.2.26 [Sep-21-2011]
Q08467	409	Casein kinase II subunit	yes	no	0.718	0.442	0.718	3e-63
Q08466	403	Casein kinase II subunit	no	no	0.734	0.459	0.717	8e-63
P28523	332	Casein kinase II subunit	N/A	no	0.555	0.421	0.928	5e-61
O64817	333	Probable casein kinase II	no	no	0.559	0.423	0.893	2e-59
O64816	432	Casein kinase II subunit	no	no	0.563	0.328	0.830	6e-55
P40231	332	Casein kinase II subunit	yes	no	0.567	0.430	0.685	1e-53
Q02720	337	Casein kinase II subunit	yes	no	0.555	0.415	0.707	9e-46
Q60737	391	Casein kinase II subunit	yes	no	0.559	0.360	0.702	2e-44
P19139	391	Casein kinase II subunit	yes	no	0.559	0.360	0.702	2e-44
P21868	391	Casein kinase II subunit	yes	no	0.559	0.360	0.702	2e-44

>sp|Q08467|CSK21_ARATH Casein kinase II subunit alpha-1 OS=Arabidopsis thaliana GN=CKA1 PE=1 SV=3

 Score =  241 bits (616), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/199 (71%), Positives = 159/199 (79%), Gaps = 18/199 (9%)

Query: 41  PIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIID-----KIEERNLAEIPLPAMS 95
           P AH PILR+         +I+T T  A + V     ID     +I + N       AMS
Sbjct: 32  PTAHSPILRS---------SIVTPTARAVSEVSGCTTIDPDFLVEISDSNQTR----AMS 78

Query: 96  KARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCII 155
           KARVYT+VNV+RPK+YWDYESL VQWG+QDDYEVVRKVGRGKYSEVFEGINVN+ E+CII
Sbjct: 79  KARVYTEVNVIRPKDYWDYESLIVQWGEQDDYEVVRKVGRGKYSEVFEGINVNSKEKCII 138

Query: 156 KILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPT 215
           KILKPVKKKKI+REIKILQNLCGGPN+VKLLD+VRDQHSKTPSLIFEYVNSTDFKVLYPT
Sbjct: 139 KILKPVKKKKIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLYPT 198

Query: 216 LTDYDIRYYIYELLKVMSI 234
           LTDYDIRYYIYELLK +  
Sbjct: 199 LTDYDIRYYIYELLKALDF 217

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha chain contains the catalytic site. May act as an ectokinase that phosphorylates several extracellular proteins.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q08466|CSK22_ARATH Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=3

 Score =  240 bits (612), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 142/198 (71%), Positives = 160/198 (80%), Gaps = 13/198 (6%)

Query: 39  RAPIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIIDK-IEERNLAEIPLPA-MSK 96
           RAP+AH  I    C        + T T+ +      G   D+ ++  +LA+I L   MSK
Sbjct: 25  RAPLAHSLIPPLTC--------VNTGTVESDVT---GIRFDRCLDTDSLAKISLSTVMSK 73

Query: 97  ARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIK 156
           ARVYTDVNV+RPK+YWDYESL VQWG+QDDYEVVRKVGRGKYSEVFEGIN+N NE+CIIK
Sbjct: 74  ARVYTDVNVIRPKDYWDYESLNVQWGEQDDYEVVRKVGRGKYSEVFEGINMNNNEKCIIK 133

Query: 157 ILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTL 216
           ILKPVKKKKI+REIKILQNLCGGPN+VKLLD+VRDQHSKTPSLIFEYVNSTDFKVLYPTL
Sbjct: 134 ILKPVKKKKIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLYPTL 193

Query: 217 TDYDIRYYIYELLKVMSI 234
           TDYDIRYYIYELLK +  
Sbjct: 194 TDYDIRYYIYELLKALDF 211

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha chain contains the catalytic site. May act as an ectokinase that phosphorylates several extracellular proteins.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P28523|CSK2A_MAIZE Casein kinase II subunit alpha OS=Zea mays GN=ACK2 PE=1 SV=1

 Score =  234 bits (596), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 130/140 (92%), Positives = 136/140 (97%)

Query: 94  MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERC 153
           MSKARVY DVNVLRPKEYWDYE+LTVQWG+QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 1   MSKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKC 60

Query: 154 IIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 213
           IIKILKPVKKKKIKREIKILQNLCGGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLY
Sbjct: 61  IIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY 120

Query: 214 PTLTDYDIRYYIYELLKVMS 233
           PTLTDYDIRYYIYELLK + 
Sbjct: 121 PTLTDYDIRYYIYELLKALD 140

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha chain contains the catalytic site.

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64817|CSK23_ARATH Probable casein kinase II subunit alpha OS=Arabidopsis thaliana GN=At2g23080 PE=1 SV=1

 Score =  229 bits (583), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 126/141 (89%), Positives = 133/141 (94%)

Query: 94  MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERC 153
           MSKARVYTDVNV+RPKEYWDYESL VQWG QDDYEVVRKVGRGKYSEVFEG NVNTNERC
Sbjct: 1   MSKARVYTDVNVVRPKEYWDYESLVVQWGHQDDYEVVRKVGRGKYSEVFEGKNVNTNERC 60

Query: 154 IIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 213
           +IKILKPVKKKKIKREIKILQNLCGGPN+VKL DIVRD+HSKTPSL+FE+VNS DFKVLY
Sbjct: 61  VIKILKPVKKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPSLVFEFVNSVDFKVLY 120

Query: 214 PTLTDYDIRYYIYELLKVMSI 234
           PTLTDYDIRYYIYELLK +  
Sbjct: 121 PTLTDYDIRYYIYELLKALDF 141

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha chain contains the catalytic site. May act as an ectokinase that phosphorylates several extracellular proteins.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64816|CSK2P_ARATH Casein kinase II subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=At2g23070 PE=2 SV=1

 Score =  214 bits (544), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 118/142 (83%), Positives = 130/142 (91%)

Query: 93  AMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNER 152
           A SKARVY DVNV+RPK+YWDYESL VQWG QDDYEVVRKVGRGKYSEVFEGI+   NE+
Sbjct: 98  APSKARVYADVNVVRPKDYWDYESLAVQWGVQDDYEVVRKVGRGKYSEVFEGIHATDNEK 157

Query: 153 CIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL 212
           C+IKILKPVKKKKIKREIKILQNLCGGPN+VKLLDIVRDQ SKTPSLIFE+VN+ DFKVL
Sbjct: 158 CVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNKDFKVL 217

Query: 213 YPTLTDYDIRYYIYELLKVMSI 234
           YPTL+DYD+RYYI+ELLK +  
Sbjct: 218 YPTLSDYDVRYYIFELLKALDF 239

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha chain contains the catalytic site. May act as an ectokinase that phosphorylates several extracellular proteins.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P40231|CSK2A_SCHPO Casein kinase II subunit alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cka1 PE=2 SV=2

 Score =  209 bits (533), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 98/143 (68%), Positives = 118/143 (82%)

Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P +S +RVY  VN   P+EYWDYE++   +G QD+YE++RKVGRGKYSEVFEG+NV  N 
Sbjct: 8   PVVSVSRVYAHVNEEMPREYWDYENMQEVFGYQDNYEIIRKVGRGKYSEVFEGLNVLNNS 67

Query: 152 RCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +CIIK+LKPVK KKIKREIKILQNL GGPN++ LLDIVRD  SKTPSLIFE+V++ DF+ 
Sbjct: 68  KCIIKVLKPVKYKKIKREIKILQNLAGGPNIISLLDIVRDPESKTPSLIFEFVDNIDFRT 127

Query: 212 LYPTLTDYDIRYYIYELLKVMSI 234
           LYPTL+DYDIRYY YELLK +  
Sbjct: 128 LYPTLSDYDIRYYSYELLKALDF 150

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Plays a role in the translation of cell polarity into polarized growth. The alpha and alpha' chains contain the catalytic site.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q02720|CSK2A_DICDI Casein kinase II subunit alpha OS=Dictyostelium discoideum GN=casK PE=2 SV=1

 Score =  183 bits (465), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 99/140 (70%), Positives = 121/140 (86%)

Query: 95  SKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCI 154
           +KAR+Y DVN+ +PKEYW+YE+L V+W  QDDYE++RK+GRGKYSEVFEG N+  NE+C+
Sbjct: 15  NKARIYCDVNLHKPKEYWNYEALNVKWETQDDYEIIRKIGRGKYSEVFEGANIKNNEKCV 74

Query: 155 IKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP 214
           IK+LKPVKKKKIKREIKILQNLCGGPN++ L D+VRD  SKTPSLIFEY+N+TDFK L P
Sbjct: 75  IKVLKPVKKKKIKREIKILQNLCGGPNIITLYDVVRDPQSKTPSLIFEYINNTDFKHLSP 134

Query: 215 TLTDYDIRYYIYELLKVMSI 234
           TLTD+D+RYYI ELL  +  
Sbjct: 135 TLTDFDVRYYIRELLHALDF 154

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha chain contains the catalytic site.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q60737|CSK21_MOUSE Casein kinase II subunit alpha OS=Mus musculus GN=Csnk2a1 PE=1 SV=2

 Score =  179 bits (454), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/141 (70%), Positives = 123/141 (87%)

Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63

Query: 152 RCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           + ++KILKPVKKKKIKREIKIL+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123

Query: 212 LYPTLTDYDIRYYIYELLKVM 232
           LY TLTDYDIR+Y+YE+LK +
Sbjct: 124 LYQTLTDYDIRFYMYEILKAL 144

Catalytic subunit of a constitutively active serine/threonine-protein kinase complex that phosphorylates a large number of substrates containing acidic residues C-terminal to the phosphorylated serine or threonine. Regulates numerous cellular processes, such as cell cycle progression, apoptosis and transcription, as well as viral infection. May act as a regulatory node which integrates and coordinates numerous signals leading to an appropriate cellular response. During mitosis, functions as a component of the p53/TP53-dependent spindle assembly checkpoint (SAC) that maintains cyclin-B-CDK1 activity and G2 arrest in response to spindle damage. Also required for p53/TP53-mediated apoptosis, phosphorylating 'Ser-392' of p53/TP53 following UV irradiation. Can also negatively regulate apoptosis. Phosphorylates the caspases CASP9 and CASP2 and the apoptotic regulator NOL3. Phosphorylation protects CASP9 from cleavage and activation by CASP8, and inhibits the dimerization of CASP2 and activation of CASP8. Regulates transcription by direct phosphorylation of RNA polymerases I, II, III and IV. Also phosphorylates and regulates numerous transcription factors including NF-kappa-B, STAT1, CREB1, IRF1, IRF2, ATF1, SRF, MAX, JUN, FOS, MYC and MYB. Phosphorylates Hsp90 and its co-chaperones FKBP4 and CDC37, which is essential for chaperone function. Regulates Wnt signaling by phosphorylating CTNNB1 and the transcription factor LEF1. Acts as an ectokinase that phosphorylates several extracellular proteins.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P19139|CSK21_RAT Casein kinase II subunit alpha OS=Rattus norvegicus GN=Csnk2a1 PE=1 SV=2

 Score =  179 bits (453), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/141 (70%), Positives = 123/141 (87%)

Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63

Query: 152 RCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           + ++KILKPVKKKKIKREIKIL+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123

Query: 212 LYPTLTDYDIRYYIYELLKVM 232
           LY TLTDYDIR+Y+YE+LK +
Sbjct: 124 LYQTLTDYDIRFYMYEILKAL 144

Catalytic subunit of a constitutively active serine/threonine-protein kinase complex that phosphorylates a large number of substrates containing acidic residues C-terminal to the phosphorylated serine or threonine. Regulates numerous cellular processes, such as cell cycle progression, apoptosis and transcription, as well as viral infection. May act as a regulatory node which integrates and coordinates numerous signals leading to an appropriate cellular response. During mitosis, functions as a component of the p53/TP53-dependent spindle assembly checkpoint (SAC) that maintains cyclin-B-CDK1 activity and G2 arrest in response to spindle damage. Also required for p53/TP53-mediated apoptosis, phosphorylating 'Ser-392' of p53/TP53 following UV irradiation. Can also negatively regulate apoptosis. Phosphorylates the caspases CASP9 and CASP2 and the apoptotic regulator NOL3. Phosphorylation protects CASP9 from cleavage and activation by CASP8, and inhibits the dimerization of CASP2 and activation of CASP8. Regulates transcription by direct phosphorylation of RNA polymerases I, II, III and IV. Also phosphorylates and regulates numerous transcription factors including NF-kappa-B, STAT1, CREB1, IRF1, IRF2, ATF1, SRF, MAX, JUN, FOS, MYC and MYB. Phosphorylates Hsp90 and its co-chaperones FKBP4 and CDC37, which is essential for chaperone function. Regulates Wnt signaling by phosphorylating CTNNB1 and the transcription factor LEF1. Acts as an ectokinase that phosphorylates several extracellular proteins.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P21868|CSK21_CHICK Casein kinase II subunit alpha OS=Gallus gallus GN=CSNK2A1 PE=2 SV=1

 Score =  179 bits (453), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/141 (70%), Positives = 123/141 (87%)

Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63

Query: 152 RCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           + ++KILKPVKKKKIKREIKIL+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123

Query: 212 LYPTLTDYDIRYYIYELLKVM 232
           LY TLTDYDIR+Y+YE+LK +
Sbjct: 124 LYQTLTDYDIRFYMYEILKAL 144

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha and alpha' chains contain the catalytic site. Participates in Wnt signaling.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	252
363814459	398	uncharacterized protein LOC100820471 pre	0.797	0.505	0.720	5e-71
356511951	411	PREDICTED: casein kinase II subunit alph	0.785	0.481	0.761	6e-71
391605	333	casein kinase II catalytic subunit [Arab	0.559	0.423	0.893	3e-70
357476359	388	Casein kinase 2 alpha subunit [Medicago	0.738	0.479	0.716	9e-68
297816254	405	hypothetical protein ARALYDRAFT_485358 [	0.777	0.483	0.716	1e-67
449448246	397	PREDICTED: casein kinase II subunit alph	0.789	0.501	0.719	1e-63
23397331	386	putative casein kinase II, alpha chain 2	0.757	0.494	0.715	1e-63
388510076	333	unknown [Medicago truncatula]	0.555	0.420	0.928	5e-63
225438950	405	PREDICTED: casein kinase II subunit alph	0.75	0.466	0.764	2e-62
224074233	333	predicted protein [Populus trichocarpa]	0.555	0.420	0.964	2e-62

>gi|363814459|ref|NP_001242864.1| uncharacterized protein LOC100820471 precursor [Glycine max] gi|255638871|gb|ACU19738.1| unknown [Glycine max]

 Score =  273 bits (698), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 160/222 (72%), Positives = 175/222 (78%), Gaps = 21/222 (9%)

Query: 12  HKHPAVLAAQVQVLPLRFLLACAVLALRAPIAHHPILRTPCRSSTYNLNIITDTIAATTV 71
           H+ PA L        LRFLL C ++ALRAP+A  PILR P        N + +T    T+
Sbjct: 5   HEAPAALL-------LRFLLVCTIVALRAPVAQPPILRIP--------NHLIETTNTFTI 49

Query: 72  VYEGAIIDKIEERNLAEIPLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVR 131
           V++           ++     AMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVR
Sbjct: 50  VHQRY------RTQISGSNRRAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVR 103

Query: 132 KVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRD 191
           KVGRGKYSEVFEGINVN+NERC+IKILKPVKKKKIKREIKILQNLCGGPN+VKLLDIVRD
Sbjct: 104 KVGRGKYSEVFEGINVNSNERCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRD 163

Query: 192 QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMS 233
           QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK + 
Sbjct: 164 QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALD 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511951|ref|XP_003524685.1| PREDICTED: casein kinase II subunit alpha-2-like [Glycine max]

 Score =  273 bits (697), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 160/210 (76%), Positives = 174/210 (82%), Gaps = 12/210 (5%)

Query: 24  VLPLRFLLACAVLALRAPIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIIDKIEE 83
            L LRFLL C ++ALRAP+A  PI+R P        N +T+T    TV+    I+ +   
Sbjct: 21  ALLLRFLLVCTLVALRAPVAQPPIVRIPP-------NHLTET--TNTVI---TIVHQRHR 68

Query: 84  RNLAEIPLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFE 143
             ++    PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFE
Sbjct: 69  TQISGSTRPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFE 128

Query: 144 GINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY 203
           GINVN+NERCIIKILKPVKKKKIKREIKILQNLCGGPN+VKLLDIVRDQHSKTPSLIFEY
Sbjct: 129 GINVNSNERCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEY 188

Query: 204 VNSTDFKVLYPTLTDYDIRYYIYELLKVMS 233
           VNSTDFKVLYPTLTDYDIRYYIYELLK + 
Sbjct: 189 VNSTDFKVLYPTLTDYDIRYYIYELLKAID 218

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|391605|dbj|BAA01091.1| casein kinase II catalytic subunit [Arabidopsis thaliana]

 Score =  271 bits (692), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 126/141 (89%), Positives = 136/141 (96%)

Query: 94  MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERC 153
           MSKARVYTDVNV+RPK+YWDYESL VQWG+QDDYEVVRKVGRGKYSEVFEGIN+N NE+C
Sbjct: 1   MSKARVYTDVNVIRPKDYWDYESLNVQWGEQDDYEVVRKVGRGKYSEVFEGINMNNNEKC 60

Query: 154 IIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 213
           IIKILKPVKKK+I+REIKILQNLCGGPN+VKLLD+VRDQHSKTPSLIFEYVNSTDFKVLY
Sbjct: 61  IIKILKPVKKKEIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLY 120

Query: 214 PTLTDYDIRYYIYELLKVMSI 234
           PTLTDYDIRYYIYELLK +  
Sbjct: 121 PTLTDYDIRYYIYELLKALDF 141

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357476359|ref|XP_003608465.1| Casein kinase 2 alpha subunit [Medicago truncatula] gi|355509520|gb|AES90662.1| Casein kinase 2 alpha subunit [Medicago truncatula]

 Score =  262 bits (670), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 152/212 (71%), Positives = 167/212 (78%), Gaps = 26/212 (12%)

Query: 23  QVLPLRFLLACAVLALRAPIAHHPILRTPCRSSTYNLN--IITDTIAATTVVYEGAIIDK 80
           Q   LR LL C +++LRAP+A  P +R P +S+  N    II   I++T           
Sbjct: 7   QAPQLRLLLVCTLISLRAPVAQPPNVRIPTQSNESNTTTTIIVSQISST----------- 55

Query: 81  IEERNLAEIPLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSE 140
                        MSKARVYTDVNV+RPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSE
Sbjct: 56  -------------MSKARVYTDVNVIRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSE 102

Query: 141 VFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI 200
           VFEGINVN++ERC+IKILKPVKKKKIKREIKILQNLCGGPN+VKLLDIVRDQHSKTPSLI
Sbjct: 103 VFEGINVNSSERCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLI 162

Query: 201 FEYVNSTDFKVLYPTLTDYDIRYYIYELLKVM 232
           FEYVNSTDFKVLYPTLTDYDIRYYIYELLK +
Sbjct: 163 FEYVNSTDFKVLYPTLTDYDIRYYIYELLKAL 194

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297816254|ref|XP_002876010.1| hypothetical protein ARALYDRAFT_485358 [Arabidopsis lyrata subsp. lyrata] gi|297321848|gb|EFH52269.1| hypothetical protein ARALYDRAFT_485358 [Arabidopsis lyrata subsp. lyrata]

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 152/212 (71%), Positives = 171/212 (80%), Gaps = 16/212 (7%)

Query: 28  RFLLACAVLALRAPIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIIDK-IEERNL 86
           RFLL CA+L LRAP AH PI    C        + T T+ +      G   ++ ++  +L
Sbjct: 13  RFLLLCAILILRAPTAHSPIPPLTC--------VATGTVESDV---SGISFNRCLDSDSL 61

Query: 87  AEIPLP----AMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVF 142
           AEI L     AMSKARVYTDVNV+RPK+YWDYESL VQWG+QDDYEVVRKVGRGKYSEVF
Sbjct: 62  AEISLSSVTGAMSKARVYTDVNVIRPKDYWDYESLNVQWGEQDDYEVVRKVGRGKYSEVF 121

Query: 143 EGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE 202
           EGIN+N+NE+CIIKILKPVKKKKI+REIKILQNLCGGPN+VKLLD+VRDQHSKTPSLIFE
Sbjct: 122 EGINMNSNEKCIIKILKPVKKKKIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFE 181

Query: 203 YVNSTDFKVLYPTLTDYDIRYYIYELLKVMSI 234
           YVNSTDFKVLYPTLTDYDIRYYIYELLK +  
Sbjct: 182 YVNSTDFKVLYPTLTDYDIRYYIYELLKALDF 213

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448246|ref|XP_004141877.1| PREDICTED: casein kinase II subunit alpha-1-like [Cucumis sativus] gi|449510998|ref|XP_004163833.1| PREDICTED: casein kinase II subunit alpha-1-like [Cucumis sativus]

 Score =  249 bits (635), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/207 (71%), Positives = 160/207 (77%), Gaps = 8/207 (3%)

Query: 27  LRFLLACAVLALRAPIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIIDKIEERNL 86
           LR LL   V  L  P++H P LR+P    + + +  +  + A          DKI    L
Sbjct: 6   LRLLLVFTVFFL-LPVSHPPTLRSPPLPPSSDASFFSSAVGAVHG-------DKITPIGL 57

Query: 87  AEIPLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGIN 146
                P MSKARVY DVNVLRPK+YWDYESL VQWGDQDDYEVVRKVGRGKYSEVFEGIN
Sbjct: 58  LGSSYPLMSKARVYADVNVLRPKDYWDYESLAVQWGDQDDYEVVRKVGRGKYSEVFEGIN 117

Query: 147 VNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS 206
           VN NERCIIKILKPVKKKKIKREIKILQNLCGGPN+VKL DIVRDQHSKTPSLIFEYVNS
Sbjct: 118 VNNNERCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLFDIVRDQHSKTPSLIFEYVNS 177

Query: 207 TDFKVLYPTLTDYDIRYYIYELLKVMS 233
           TDFKVLYPTLTDYDIRYYIYELLK + 
Sbjct: 178 TDFKVLYPTLTDYDIRYYIYELLKALD 204

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|23397331|gb|AAK44123.2|AF370308_1 putative casein kinase II, alpha chain 2 CK II [Arabidopsis thaliana]

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/204 (71%), Positives = 165/204 (80%), Gaps = 13/204 (6%)

Query: 33  CAVLALRAPIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIIDK-IEERNLAEIPL 91
           CA+L LRAP+AH  I    C        + T T+ +      G   D+ ++  +LA+I L
Sbjct: 2   CAILILRAPLAHSLIPPLTC--------VNTGTVESDVT---GIRFDRCLDTDSLAKISL 50

Query: 92  PA-MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTN 150
              MSKARVYTDVNV+RPK+YWDYESL VQWG+QDDYEVVRKVGRGKYSEVFEGIN+N N
Sbjct: 51  STVMSKARVYTDVNVIRPKDYWDYESLNVQWGEQDDYEVVRKVGRGKYSEVFEGINMNNN 110

Query: 151 ERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFK 210
           E+CIIKILKPVKKKKI+REIKILQNLCGGPN+VKLLD+VRDQHSKTPSLIFEYVNSTDFK
Sbjct: 111 EKCIIKILKPVKKKKIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFK 170

Query: 211 VLYPTLTDYDIRYYIYELLKVMSI 234
           VLYPTLTDYDIRYYIYELLK +  
Sbjct: 171 VLYPTLTDYDIRYYIYELLKALDF 194

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510076|gb|AFK43104.1| unknown [Medicago truncatula]

 Score =  246 bits (629), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 130/140 (92%), Positives = 137/140 (97%)

Query: 94  MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERC 153
           MSKARVYTDVNV+RPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVN++ERC
Sbjct: 1   MSKARVYTDVNVIRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSSERC 60

Query: 154 IIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 213
           +IKILKPVKKKKIKRE+KILQNLCGGPN+VKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY
Sbjct: 61  VIKILKPVKKKKIKREMKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 120

Query: 214 PTLTDYDIRYYIYELLKVMS 233
           PTLTDYDIRY IYELLK + 
Sbjct: 121 PTLTDYDIRYCIYELLKALD 140

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438950|ref|XP_002284196.1| PREDICTED: casein kinase II subunit alpha-2 isoform 1 [Vitis vinifera]

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/195 (76%), Positives = 158/195 (81%), Gaps = 6/195 (3%)

Query: 39  RAPIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIIDKIEERNLAEIPLPAMSKAR 98
           RAP+A  P LR P  S     N I   I  T+       + +I   ++A      MSKAR
Sbjct: 24  RAPLALPPNLR-PHSSPPIPDNKIITPIVDTSKARLKLQLSEISSSDVA-----PMSKAR 77

Query: 99  VYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL 158
           VY DVNVLRPK+YWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVN+NERCIIKIL
Sbjct: 78  VYADVNVLRPKDYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSNERCIIKIL 137

Query: 159 KPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTD 218
           KPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTD
Sbjct: 138 KPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTD 197

Query: 219 YDIRYYIYELLKVMS 233
           YDIRYYIYELLK + 
Sbjct: 198 YDIRYYIYELLKALD 212

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074233|ref|XP_002304312.1| predicted protein [Populus trichocarpa] gi|222841744|gb|EEE79291.1| predicted protein [Populus trichocarpa]

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/140 (96%), Positives = 138/140 (98%)

Query: 94  MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERC 153
           MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVN+NERC
Sbjct: 1   MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSNERC 60

Query: 154 IIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 213
           +IKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY
Sbjct: 61  VIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 120

Query: 214 PTLTDYDIRYYIYELLKVMS 233
           PTLTDYDIRYYIYELLK + 
Sbjct: 121 PTLTDYDIRYYIYELLKALD 140

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	252
UNIPROTKB|Q9AR27	333	OSCKA2 "Casein kinase II alpha	0.551	0.417	0.798	2.2e-57
TAIR|locus:2045349	333	CKA3 "casein kinase II, alpha	0.551	0.417	0.776	1.4e-55
TAIR|locus:2045339	432	AT2G23070 [Arabidopsis thalian	0.555	0.324	0.714	5.1e-51
DICTYBASE|DDB_G0276885	337	casK "casein kinase II subunit	0.547	0.409	0.594	6.4e-44
UNIPROTKB|P21868	391	CSNK2A1 "Casein kinase II subu	0.559	0.360	0.581	1.2e-42
UNIPROTKB|P68399	391	CSNK2A1 "Casein kinase II subu	0.559	0.360	0.581	1.2e-42
UNIPROTKB|E2RHZ1	391	CSNK2A1 "Uncharacterized prote	0.559	0.360	0.581	1.2e-42
UNIPROTKB|E7EU96	385	CSNK2A1 "Casein kinase II subu	0.559	0.366	0.581	1.2e-42
UNIPROTKB|P68400	391	CSNK2A1 "Casein kinase II subu	0.559	0.360	0.581	1.2e-42
UNIPROTKB|F2Z5I5	391	CSNK2A1 "Uncharacterized prote	0.559	0.360	0.581	1.2e-42

UNIPROTKB|Q9AR27 OSCKA2 "Casein kinase II alpha subunit" [Oryza sativa Indica Group (taxid:39946)]

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 111/139 (79%), Positives = 117/139 (84%)

Query:    94 MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERC 153
             MSKARVY DVNVLRPKEYWDYE+LTVQWG+QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct:     1 MSKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKC 60

Query:   154 XXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 213
                                LQNLCGGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLY
Sbjct:    61 IIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY 120

Query:   214 PTLTDYDIRYYIYELLKVM 232
             PTLTDYDIRYYIYELLK +
Sbjct:   121 PTLTDYDIRYYIYELLKAL 139

GO:0009648 "photoperiodism" evidence=IGI

GO:0010229 "inflorescence development" evidence=IMP

TAIR|locus:2045349 CKA3 "casein kinase II, alpha chain 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 108/139 (77%), Positives = 114/139 (82%)

Query:    94 MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERC 153
             MSKARVYTDVNV+RPKEYWDYESL VQWG QDDYEVVRKVGRGKYSEVFEG NVNTNERC
Sbjct:     1 MSKARVYTDVNVVRPKEYWDYESLVVQWGHQDDYEVVRKVGRGKYSEVFEGKNVNTNERC 60

Query:   154 XXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 213
                                LQNLCGGPN+VKL DIVRD+HSKTPSL+FE+VNS DFKVLY
Sbjct:    61 VIKILKPVKKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPSLVFEFVNSVDFKVLY 120

Query:   214 PTLTDYDIRYYIYELLKVM 232
             PTLTDYDIRYYIYELLK +
Sbjct:   121 PTLTDYDIRYYIYELLKAL 139

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IGI

GO:0006281 "DNA repair" evidence=IDA

GO:0006325 "chromatin organization" evidence=IEP;IDA

GO:0010225 "response to UV-C" evidence=IMP

GO:0010332 "response to gamma radiation" evidence=IMP

GO:0051726 "regulation of cell cycle" evidence=IEP

GO:2001020 "regulation of response to DNA damage stimulus" evidence=IEP

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

TAIR|locus:2045339 AT2G23070 [Arabidopsis thaliana (taxid:3702)]

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 100/140 (71%), Positives = 111/140 (79%)

Query:    93 AMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNER 152
             A SKARVY DVNV+RPK+YWDYESL VQWG QDDYEVVRKVGRGKYSEVFEGI+   NE+
Sbjct:    98 APSKARVYADVNVVRPKDYWDYESLAVQWGVQDDYEVVRKVGRGKYSEVFEGIHATDNEK 157

Query:   153 CXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL 212
             C                   LQNLCGGPN+VKLLDIVRDQ SKTPSLIFE+VN+ DFKVL
Sbjct:   158 CVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNKDFKVL 217

Query:   213 YPTLTDYDIRYYIYELLKVM 232
             YPTL+DYD+RYYI+ELLK +
Sbjct:   218 YPTLSDYDVRYYIFELLKAL 237

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

DICTYBASE|DDB_G0276885 casK "casein kinase II subunit alpha" [Dictyostelium discoideum (taxid:44689)]

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 82/138 (59%), Positives = 102/138 (73%)

Query:    95 SKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCX 154
             +KAR+Y DVN+ +PKEYW+YE+L V+W  QDDYE++RK+GRGKYSEVFEG N+  NE+C 
Sbjct:    15 NKARIYCDVNLHKPKEYWNYEALNVKWETQDDYEIIRKIGRGKYSEVFEGANIKNNEKCV 74

Query:   155 XXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP 214
                               LQNLCGGPN++ L D+VRD  SKTPSLIFEY+N+TDFK L P
Sbjct:    75 IKVLKPVKKKKIKREIKILQNLCGGPNIITLYDVVRDPQSKTPSLIFEYINNTDFKHLSP 134

Query:   215 TLTDYDIRYYIYELLKVM 232
             TLTD+D+RYYI ELL  +
Sbjct:   135 TLTDFDVRYYIRELLHAL 152

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|P21868 CSNK2A1 "Casein kinase II subunit alpha" [Gallus gallus (taxid:9031)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 82/141 (58%), Positives = 104/141 (73%)

Query:    92 PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
             P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct:     4 PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63

Query:   152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
             +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct:    64 KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123

Query:   212 LYPTLTDYDIRYYIYELLKVM 232
             LY TLTDYDIR+Y+YE+LK +
Sbjct:   124 LYQTLTDYDIRFYMYEILKAL 144

GO:0005524 "ATP binding" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0016580 "Sin3 complex" evidence=IEA

GO:0016581 "NuRD complex" evidence=IEA

GO:0019888 "protein phosphatase regulator activity" evidence=IEA

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0047485 "protein N-terminus binding" evidence=IEA

GO:0071174 "mitotic spindle checkpoint" evidence=IEA

GO:0031519 "PcG protein complex" evidence=ISS

UNIPROTKB|P68399 CSNK2A1 "Casein kinase II subunit alpha" [Bos taurus (taxid:9913)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 82/141 (58%), Positives = 104/141 (73%)

Query:    92 PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
             P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct:     4 PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63

Query:   152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
             +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct:    64 KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123

Query:   212 LYPTLTDYDIRYYIYELLKVM 232
             LY TLTDYDIR+Y+YE+LK +
Sbjct:   124 LYQTLTDYDIRFYMYEILKAL 144

GO:0047485 "protein N-terminus binding" evidence=ISS

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0071174 "mitotic spindle checkpoint" evidence=ISS

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISS

GO:0031519 "PcG protein complex" evidence=ISS

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2RHZ1 CSNK2A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 82/141 (58%), Positives = 104/141 (73%)

Query:    92 PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
             P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct:     4 PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63

Query:   152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
             +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct:    64 KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123

Query:   212 LYPTLTDYDIRYYIYELLKVM 232
             LY TLTDYDIR+Y+YE+LK +
Sbjct:   124 LYQTLTDYDIRFYMYEILKAL 144

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0071174 "mitotic spindle checkpoint" evidence=IEA

GO:0047485 "protein N-terminus binding" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0031519 "PcG protein complex" evidence=IEA

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0019888 "protein phosphatase regulator activity" evidence=IEA

GO:0016581 "NuRD complex" evidence=IEA

GO:0016580 "Sin3 complex" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

UNIPROTKB|E7EU96 CSNK2A1 "Casein kinase II subunit alpha" [Homo sapiens (taxid:9606)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 82/141 (58%), Positives = 104/141 (73%)

Query:    92 PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
             P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct:     4 PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63

Query:   152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
             +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct:    64 KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123

Query:   212 LYPTLTDYDIRYYIYELLKVM 232
             LY TLTDYDIR+Y+YE+LK +
Sbjct:   124 LYQTLTDYDIRFYMYEILKAL 144

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P68400 CSNK2A1 "Casein kinase II subunit alpha" [Homo sapiens (taxid:9606)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 82/141 (58%), Positives = 104/141 (73%)

Query:    92 PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
             P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct:     4 PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63

Query:   152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
             +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct:    64 KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123

Query:   212 LYPTLTDYDIRYYIYELLKVM 232
             LY TLTDYDIR+Y+YE+LK +
Sbjct:   124 LYQTLTDYDIRFYMYEILKAL 144

GO:0005524 "ATP binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0019888 "protein phosphatase regulator activity" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA;TAS

GO:0047485 "protein N-terminus binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0045732 "positive regulation of protein catabolic process" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0030307 "positive regulation of cell growth" evidence=IDA

GO:0008284 "positive regulation of cell proliferation" evidence=IDA

GO:0031519 "PcG protein complex" evidence=IDA

GO:0071174 "mitotic spindle checkpoint" evidence=IMP

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IMP

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IMP

GO:0051879 "Hsp90 protein binding" evidence=TAS

GO:0061077 "chaperone-mediated protein folding" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005886 "plasma membrane" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0007411 "axon guidance" evidence=TAS

GO:0016581 "NuRD complex" evidence=IDA

GO:0016580 "Sin3 complex" evidence=IDA

UNIPROTKB|F2Z5I5 CSNK2A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 82/141 (58%), Positives = 104/141 (73%)

Query:    92 PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
             P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct:     4 PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63

Query:   152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
             +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct:    64 KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123

Query:   212 LYPTLTDYDIRYYIYELLKVM 232
             LY TLTDYDIR+Y+YE+LK +
Sbjct:   124 LYQTLTDYDIRFYMYEILKAL 144

GO:0071174 "mitotic spindle checkpoint" evidence=IEA

GO:0047485 "protein N-terminus binding" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0031519 "PcG protein complex" evidence=IEA

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0019888 "protein phosphatase regulator activity" evidence=IEA

GO:0016581 "NuRD complex" evidence=IEA

GO:0016580 "Sin3 complex" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P21868	CSK21_CHICK	2, ., 7, ., 1, 1, ., 1	0.7021	0.5595	0.3606	yes	no
P68399	CSK21_BOVIN	2, ., 7, ., 1, 1, ., 1	0.7021	0.5595	0.3606	yes	no
P28523	CSK2A_MAIZE	2, ., 7, ., 1, 1, ., 1	0.9285	0.5555	0.4216	N/A	no
P19139	CSK21_RAT	2, ., 7, ., 1, 1, ., 1	0.7021	0.5595	0.3606	yes	no
P68400	CSK21_HUMAN	2, ., 7, ., 1, 1, ., 1	0.7021	0.5595	0.3606	yes	no
Q02720	CSK2A_DICDI	2, ., 7, ., 1, 1, ., 1	0.7071	0.5555	0.4154	yes	no
Q60737	CSK21_MOUSE	2, ., 7, ., 1, 1, ., 1	0.7021	0.5595	0.3606	yes	no
Q08467	CSK21_ARATH	2, ., 7, ., 1, 1, ., 1	0.7185	0.7182	0.4425	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	252
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-20
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-18
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-13
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-12
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-12
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-11
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-11
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	5e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	6e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-10
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	7e-10
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-09
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	4e-09
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-08
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-08
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-08
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-08
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-08
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-07
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-07
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	6e-07
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	6e-07
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	9e-07
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-06
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	3e-06
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-06
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	4e-06
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	6e-06
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	7e-06
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-06
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-05
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-05
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-05
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-05
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-05
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-05
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	4e-05
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	5e-05
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	6e-05
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	9e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	1e-04
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-04
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-04
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-04
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	5e-04
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	6e-04
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	6e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	7e-04
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	8e-04
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	0.002
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	0.002
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	0.002
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.002
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	0.002
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.002
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	0.002
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	0.003
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	0.003
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 85.7 bits (213), Expect = 5e-20
 Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 10/111 (9%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK----IKREIKILQNLCGGPNV 182
           YE++ K+G G + +V+   +  T +   IK++K  K KK    I REIKIL+ L   PN+
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKL-KHPNI 59

Query: 183 VKLLDIVRDQHSKTPSLIFEYVNSTD-FKVL--YPTLTDYDIRYYIYELLK 230
           V+L D+  D+      L+ EY    D F +L     L++ + R+Y+ ++L 
Sbjct: 60  VRLYDVFEDEDK--LYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILS 108

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 81.1 bits (201), Expect = 2e-18
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 11/114 (9%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK-----REIKILQNLCGGPN 181
           YE++RK+G G +  V++  +  T +   +KILK   +K  K     REI+IL+ L   PN
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRL-SHPN 59

Query: 182 VVKLLDIVRDQHSKTPSLIFEYVNSTDFK---VLYPTLTDYDIRYYIYELLKVM 232
           +V+L+D   D       L+ EY    D          L++ + +    ++L+ +
Sbjct: 60  IVRLIDAFED--KDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGL 111

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 67.6 bits (166), Expect = 1e-13
 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 11/109 (10%)

Query: 133 VGRGKYSEVFEGINVNTNERCIIKILKPVKKKK----IKREIKILQNLCGGPNVVKLLDI 188
           +G G +  V+   +  T ++  IKI+K          + REI+IL+ L   PN+VKL  +
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-NHPNIVKLYGV 59

Query: 189 VRDQHSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMS 233
             D+      L+ EY      K L       L++ +I   + ++L+ + 
Sbjct: 60  FEDE--NHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLE 106

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 13/113 (11%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-----PVKKKKIKREIKILQNLCGGPN 181
           Y+ + K+G G Y  V++  +  T E   IK +K         K   REIK+L+ L   PN
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-NHPN 59

Query: 182 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL----YPTLTDYDIRYYIYELLK 230
           ++KLLD+ R +      L+FE++++  +K++       L +  I+ Y+Y+LL+
Sbjct: 60  IIKLLDVFRHK--GDLYLVFEFMDTDLYKLIKDRQRG-LPESLIKSYLYQLLQ 109

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 64.1 bits (157), Expect = 5e-12
 Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 11/116 (9%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK-----IKREIKILQNLCGGPN 181
           YE + ++G G Y +V++  N  T E   +K ++   +K+       REIK+LQ L   PN
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLR-HPN 59

Query: 182 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL----YPTLTDYDIRYYIYELLKVMS 233
           +V+L +IV  +   +  ++FEY+   D   L        T+  I+ Y+ +LL+ + 
Sbjct: 60  IVRLKEIVTSKGKGSIYMVFEYM-DHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQ 114

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 11/115 (9%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-----PVKKKKIKREIKILQNLCGGPN 181
           YEV+  VG G Y  V +  N  T E   IK  K        KK   RE+K+L+ L    N
Sbjct: 3   YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-RHEN 61

Query: 182 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL--YPTLTDYD-IRYYIYELLKVMS 233
           +V L +  R        L+FEYV  T  ++L   P     D +R YI++LL+ ++
Sbjct: 62  IVNLKEAFR--RKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIA 114

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 61.8 bits (151), Expect = 3e-11
 Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 13/115 (11%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVKK----KKIKREIKILQNLCGGPN 181
           YE+++ +G G Y  V   ++  T  +  IK I          K+I REIK+L++L    N
Sbjct: 2   YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-RHEN 60

Query: 182 VVKLLDIVRDQHSKTPS---LIFEYVNSTDF-KVLY--PTLTDYDIRYYIYELLK 230
           ++ LLDI+R    +  +   ++ E +  TD  KV+     LTD  I+Y++Y++L+
Sbjct: 61  IIGLLDILRPPSPEDFNDVYIVTELM-ETDLHKVIKSPQPLTDDHIQYFLYQILR 114

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 61.0 bits (149), Expect = 5e-11
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 13/113 (11%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK-IK----REIKILQNLCGGPN 181
           YE + K+G G Y  V++  +  T E   +K ++   +++ I     REI +L+ L   PN
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKEL-KHPN 59

Query: 182 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL----YPTLTDYDIRYYIYELLK 230
           +VKLLD++     +   L+FEY +  D K         L+   I+  +Y+LL+
Sbjct: 60  IVKLLDVIH--TERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLR 109

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 60.7 bits (148), Expect = 6e-11
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 10/112 (8%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK---IKREIKILQNLCGGPNV 182
            +E++ K+G+G + EV++  +  T +   IK++K   K+K   I  EI+IL+  C  PN+
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILK-KCKHPNI 59

Query: 183 VKLLDIVRDQHSKTPSLIFEYVN----STDFKVLYPTLTDYDIRYYIYELLK 230
           VK              ++ E+ +        K    TLT+  I Y   ELLK
Sbjct: 60  VKYYGSY--LKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLK 109

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 60.1 bits (144), Expect = 2e-10
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 17/120 (14%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK------IKREIKILQNLCGG 179
            Y ++RK+G G + EV+   +    +   +K+L    + K        REI+IL +L   
Sbjct: 1   SYRILRKLGEGSFGEVYLARD---RKLVALKVLAKKLESKSKEVERFLREIQILASLNHP 57

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKVMS 233
           PN+VKL D    Q   +  L+ EYV+    + L         L++ +  + + ++L  + 
Sbjct: 58  PNIVKLYDFF--QDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALE 115

Length = 384

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 57.5 bits (140), Expect = 7e-10
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 26/120 (21%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK--------REIKILQNLCG 178
           Y+V++++G G +  V+   N  T E   IK +    KKK          RE+K L+ L  
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKM----KKKFYSWEECMNLREVKSLRKLNE 56

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD--------IRYYIYELLK 230
            PN+VKL ++ R+  +     +FEY+       LY  + D          IR  IY++L+
Sbjct: 57  HPNIVKLKEVFRE--NDELYFVFEYMEGN----LYQLMKDRKGKPFSESVIRSIIYQILQ 110

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 56.0 bits (136), Expect = 3e-09
 Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 22/120 (18%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKI-------------KREIKIL 173
           YE+++K+G+G Y  V++ I+  T E         V  KKI              REI  L
Sbjct: 9   YEILQKLGKGAYGIVWKAIDRRTKEV--------VALKKIFDAFRNATDAQRTFREIMFL 60

Query: 174 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPT-LTDYDIRYYIYELLKVM 232
           Q L   PN+VKLL++++ ++ K   L+FEY+ +    V+    L D   RY +Y+LLK +
Sbjct: 61  QELGDHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRANILEDVHKRYIMYQLLKAL 120

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 16/116 (13%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK--------REIKILQNLCG 178
           YE  +K+G G Y+ V++  +  T     IK +K  ++K+ K        REIK+LQ L  
Sbjct: 2   YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-K 60

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLK 230
            PN++ LLD+    H    +L+FE++  TD + +       LT  DI+ Y+   L+
Sbjct: 61  HPNIIGLLDVF--GHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLR 113

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 8/84 (9%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK-----IKREIKILQNLCGGP 180
           +Y++   +GRG +  V++G+N+ T +   IK +   K K+     I +EI +L+NL   P
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KHP 59

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYV 204
           N+VK +  +    S +  +I EY 
Sbjct: 60  NIVKYIGSIET--SDSLYIILEYA 81

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 32/120 (26%), Positives = 66/120 (55%), Gaps = 17/120 (14%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK--------REIKILQNLCG 178
           Y+++ K+G G +SEV +  +  T +   IK +K    K  K        REI+ L+ L  
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMK----KHFKSLEQVNNLREIQALRRLSP 56

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL----YPTLTDYDIRYYIYELLKVMSI 234
            PN+++L++++ D+ +   +L+FE ++   ++++     P L +  ++ Y+Y+LLK +  
Sbjct: 57  HPNILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRP-LPEKRVKSYMYQLLKSLDH 115

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 53.3 bits (129), Expect = 2e-08
 Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 9/113 (7%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIK--ILKPVKKKK---IKREIKILQNLCGGP 180
           ++     +GRG +  V+  ++ +T E   +K   L    +++   ++REI+IL +L   P
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-QHP 59

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYVNS---TDFKVLYPTLTDYDIRYYIYELLK 230
           N+V+     RD+   T ++  EYV+    +     +  L +  IR Y  ++L+
Sbjct: 60  NIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILE 112

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNV 182
             +E+V  +G G Y +V++  +  T +   IKI+  ++  +++IK E  IL+     PN+
Sbjct: 6   GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNI 65

Query: 183 VK 184
             
Sbjct: 66  AT 67

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 15/116 (12%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP---VKKKK---IKREIKILQNLCG 178
           DD++  + +G G +S V       TN+   IKIL     +K+KK   +K E ++L  L G
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60

Query: 179 GPNVVKLLDIVRDQHSKTPSLIF--EYVNSTDFKVL---YPTLTDYDIRYYIYELL 229
            P ++KL    +D+     +L F  EY  + +       Y +L +   R+Y  E+L
Sbjct: 61  HPGIIKLYYTFQDEE----NLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEIL 112

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 13/114 (11%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVKKKKIK----REIKILQNLCGGP 180
            Y+++ ++G G +  VF+  +  T E   +K +     +  I     REIK LQ  C  P
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQA-CQHP 59

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL----YPTLTDYDIRYYIYELLK 230
            VVKLLD+    H     L+ EY+ S   +VL     P L +  ++ Y+  LLK
Sbjct: 60  YVVKLLDVFP--HGSGFVLVMEYMPSDLSEVLRDEERP-LPEAQVKSYMRMLLK 110

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 50.2 bits (121), Expect = 2e-07
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 10/87 (11%)

Query: 131 RKVGRGKYSEVFEGI---NVNTNERCIIKILK----PVKKKKIKREIKILQNLCGGPNVV 183
           +K+G G + EV++G             +K LK      ++K   +E ++++ L G PNVV
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPNVV 59

Query: 184 KLLDIVRDQHSKTPSLIFEYVNSTDFK 210
           +LL +  ++      L+ EY+   D  
Sbjct: 60  RLLGVCTEEEP--LYLVLEYMEGGDLL 84

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 49.1 bits (118), Expect = 6e-07
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 119 VQWGDQDD-YEVVRKVGRGKYSEVFEGINVNTNERCIIK--ILKPVKKKKIKREIKILQN 175
           V  GD  + Y+ + K+G G   EV++  +  T +   IK   L+   K+ I  EI I+++
Sbjct: 12  VSEGDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKD 71

Query: 176 LCGGPNVVKLLD 187
            C  PN+V   D
Sbjct: 72  -CKHPNIVDYYD 82

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 4/64 (6%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK---KKIKREIKILQNLCGGP 180
           Q+DYE+++++G G Y +V++  ++ T E   IK++K       + I++EI +L+  C  P
Sbjct: 2   QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKE-CRHP 60

Query: 181 NVVK 184
           N+V 
Sbjct: 61  NIVA 64

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 48.4 bits (116), Expect = 9e-07
 Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 4/63 (6%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK--KKIKREIKILQNLCGGPN 181
           ++ ++++ K+G G Y  V++ I+  T +   IK++ PV++  ++I +EI IL+  C  P 
Sbjct: 2   EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVV-PVEEDLQEIIKEISILKQ-CDSPY 59

Query: 182 VVK 184
           +VK
Sbjct: 60  IVK 62

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 6/78 (7%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVKKKKIK----REIKILQNLCG 178
             DYE++ K+G G + EV++   + T     +K IL   +K        REIKIL+ L  
Sbjct: 7   LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL-K 65

Query: 179 GPNVVKLLDIVRDQHSKT 196
            PNVV L+D+  ++  K+
Sbjct: 66  HPNVVPLIDMAVERPDKS 83

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 26/96 (27%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK-------------REIKIL 173
           YE + ++G G Y  V++  ++NT         + V  KK++             REI +L
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTG--------RFVALKKVRVPLSEEGIPLSTLREIALL 52

Query: 174 QNL--CGGPNVVKLLDI---VRDQHSKTPSLIFEYV 204
           + L     PN+V+LLD+    R       +L+FE+V
Sbjct: 53  KQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHV 88

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 16/100 (16%)

Query: 121 WGDQ--DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK-----IKREIKIL 173
           WG +  D ++++ ++G G Y +V++  + +T E   +K ++   +K+       REIKIL
Sbjct: 1   WGKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKIL 60

Query: 174 QNLCGGPNVVKLLDIVRDQHSKTP--------SLIFEYVN 205
           + L    N+V L +IV D+              L+FEY++
Sbjct: 61  RQL-NHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMD 99

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 10/115 (8%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL-----KPVKKKKIKREIKILQNLCGG 179
             Y+ +  +G G Y  V   I+  + ++  IK +      P   K+  RE+KIL++    
Sbjct: 5   SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF-KH 63

Query: 180 PNVVKLLDIVR--DQHSKTPSLIFEYVNSTDFKVLYP--TLTDYDIRYYIYELLK 230
            N++ + DI+R      K   ++ + + S    +++    LT+  IRY++Y+LL+
Sbjct: 64  DNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLR 118

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 46.2 bits (109), Expect = 6e-06
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNV 182
           D +E++  +G+G Y +VF+ +N     +  +KIL P+    ++I+ E  IL+ L   PNV
Sbjct: 18  DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNV 77

Query: 183 VKLLDIVRDQHSKT 196
           VK   +   +  K 
Sbjct: 78  VKFYGMYYKKDVKN 91

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 45.6 bits (109), Expect = 7e-06
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 11/82 (13%)

Query: 131 RKVGRGKYSEVFEGI----NVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNV 182
           +K+G G + EV++G              +K LK        ++  RE +I++ L   PNV
Sbjct: 5   KKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKL-DHPNV 63

Query: 183 VKLLDIVRDQHSKTPSLIFEYV 204
           VKLL +  ++      ++ EY+
Sbjct: 64  VKLLGVCTEEEP--LYIVMEYM 83

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 45.6 bits (109), Expect = 8e-06
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 11/82 (13%)

Query: 131 RKVGRGKYSEVFEGI----NVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNV 182
           +K+G G + EV++G              +K LK        ++  RE +I++ L   PN+
Sbjct: 5   KKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKL-DHPNI 63

Query: 183 VKLLDIVRDQHSKTPSLIFEYV 204
           VKLL +  ++      ++ EY+
Sbjct: 64  VKLLGVCTEEEP--LMIVMEYM 83

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 44.8 bits (107), Expect = 1e-05
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 11/82 (13%)

Query: 131 RKVGRGKYSEVFEGI----NVNTNERCIIKILKP----VKKKKIKREIKILQNLCGGPNV 182
           +K+G G + EV++G        T  +  +K LK      ++++   E  I++ L   PN+
Sbjct: 5   KKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKL-SHPNI 63

Query: 183 VKLLDIVRDQHSKTPSLIFEYV 204
           V+LL +      +   ++ EY+
Sbjct: 64  VRLLGVCT--QGEPLYIVTEYM 83

Length = 258

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNV 182
           D +E++  +G+G Y +V++  N        +KIL P+    ++I+ E  ILQ+L   PNV
Sbjct: 22  DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNV 81

Query: 183 VKL 185
           VK 
Sbjct: 82  VKF 84

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 11/114 (9%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTN--ERCIIKILKPVKKKKIK-----REIKILQNLCGG 179
           YE+++++G+G Y  V    N  T+  E   IK +  V  KKI      RE+K+L++  G 
Sbjct: 2   YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGH 61

Query: 180 PNVVKL--LDIVRDQHSKTPSLIFEYVNSTDFKVLYPT--LTDYDIRYYIYELL 229
            N+  L  +DIV   +     L  E + +   +++     LTD   + +IY++L
Sbjct: 62  KNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQIL 115

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 21/100 (21%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK-----------REIKIL 173
           D YE + K+G G Y +V++  + NT +      L  +KK +++           REI +L
Sbjct: 1   DAYEKLEKIGEGTYGKVYKARDKNTGK------LVALKKTRLEMDEEGIPPTALREISLL 54

Query: 174 QNLCGGPNVVKLLDIVR-DQHSKTPS--LIFEYVNSTDFK 210
           Q L     +V+LLD+   ++ +  PS  L+FEY+  +D K
Sbjct: 55  QMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYL-DSDLK 93

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 27/114 (23%), Positives = 59/114 (51%), Gaps = 9/114 (7%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKK----KIKREIKILQNLCGGP 180
             Y+ +  +G G Y  V    +  T  +  IK + P + +    +  REIKIL+      
Sbjct: 5   PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF-KHE 63

Query: 181 NVVKLLDIVRDQHSKTPS---LIFEYVNSTDFKVLYP-TLTDYDIRYYIYELLK 230
           N++ +LDI+R    ++ +   ++ E + +  +K++    L++  I+Y++Y++L+
Sbjct: 64  NIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQHLSNDHIQYFLYQILR 117

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 44.7 bits (105), Expect = 2e-05
 Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 2/62 (3%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK--PVKKKKIKREIKILQNLCGGPN 181
           Q+D+E+++++G G Y +V++  NVNT E   IK++K  P +   + ++  I+   C   N
Sbjct: 8   QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSN 67

Query: 182 VV 183
           +V
Sbjct: 68  IV 69

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 30/122 (24%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK-------------REIKIL 173
           Y+ V K+G G Y  V++  +  T E         V  KKI+             REI +L
Sbjct: 1   YQKVEKIGEGTYGVVYKARDKLTGEI--------VALKKIRLETEDEGVPSTAIREISLL 52

Query: 174 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFK-----VLYPTLTDYDIRYYIYEL 228
           + L   PN+V+LLD+V  ++     L+FE+++  D K          L    I+ Y+Y+L
Sbjct: 53  KEL-NHPNIVRLLDVVHSENKLY--LVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQL 108

Query: 229 LK 230
           L+
Sbjct: 109 LQ 110

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 9/89 (10%)

Query: 130 VRKVGRGKYSEV----FEGINVNTNERCIIKILK----PVKKKKIKREIKILQNLCGGPN 181
           ++++G G + +V    ++ +  NT E+  +K L        +   +REI+IL+ L    N
Sbjct: 9   IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-DHEN 67

Query: 182 VVKLLDIVRDQHSKTPSLIFEYVNSTDFK 210
           +VK   +      ++  LI EY+ S   +
Sbjct: 68  IVKYKGVCEKPGGRSLRLIMEYLPSGSLR 96

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 13/113 (11%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKIL------KPVKKKKIKREIKILQNLCGGP 180
           YE +  VG G Y  V +  +  T +   IK        K VKK  + REI++L+ L    
Sbjct: 3   YENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAM-REIRMLKQL-RHE 60

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL--YPTLTDYD-IRYYIYELLK 230
           N+V L+++ R +  K   L+FE+V+ T    L  YP   D   +R Y++++L+
Sbjct: 61  NLVNLIEVFRRK--KRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILR 111

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 12/86 (13%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK--------REIKILQNLC 177
           ++E + ++G G Y  V+   +  + E   I  LK V+    +        REI +L N  
Sbjct: 8   EFEKLNRIGEGTYGIVYRARDTTSGE---IVALKKVRMDNERDGIPISSLREITLLLN-L 63

Query: 178 GGPNVVKLLDIVRDQHSKTPSLIFEY 203
             PN+V+L ++V  +H  +  L+ EY
Sbjct: 64  RHPNIVELKEVVVGKHLDSIFLVMEY 89

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 15/116 (12%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-------PVKKKKIKREIKILQNLC 177
           + YE + K+G G Y  VF+  N  T +  I+ I K       PV KK   REI++L+ L 
Sbjct: 1   EKYEKLSKIGEGSYGVVFKCRNRETGQ--IVAIKKFVESEDDPVIKKIALREIRMLKQL- 57

Query: 178 GGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL--YPT-LTDYDIRYYIYELLK 230
             PN+V L+++ R    +   L+FEY + T    L   P  + ++ I+  I++ L+
Sbjct: 58  KHPNLVNLIEVFR--RKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQ 111

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 42.9 bits (101), Expect = 6e-05
 Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 18/118 (15%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK------PVKKKKIKREIKILQNLCG 178
           D YE V K+G G Y  V++  +  TNE   +K ++       V    I REI +L+ +  
Sbjct: 2   DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAI-REISLLKEMQH 60

Query: 179 GPNVVKLLDIVRDQHS-KTPSLIFEYVNSTDFKVLYPTLTDYD-----IRYYIYELLK 230
           G N+V+L D+V   HS K   L+FEY++  D K    +  D+      I+ Y+Y++L+
Sbjct: 61  G-NIVRLQDVV---HSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILR 113

Length = 294

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 42.4 bits (100), Expect = 9e-05
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 14/109 (12%)

Query: 133 VGRGKYSEVFEGINVNTNERCIIKILKPVKK--------KKIKREIKILQNLCGGPNVVK 184
           +G G +  V+EG+N++  +   +K +             K++++EI +L  L   PN+V+
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPNIVQ 66

Query: 185 LLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLK 230
            L   R+       +  E V       L   Y +  +  IR Y  ++L 
Sbjct: 67  YLGTERE--EDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILL 113

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 19/116 (16%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--------KKKIKREIKILQNLCG 178
           YE + K+G G Y  VF+  N  T+E   I  LK V+             REI +L+ L  
Sbjct: 2   YEKLEKIGEGTYGTVFKAKNRETHE---IVALKRVRLDDDDEGVPSSALREICLLKEL-K 57

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY----DIRYYIYELLK 230
             N+V+L D++      T  L+FEY +  D K  + +         ++ ++++LLK
Sbjct: 58  HKNIVRLYDVLHSDKKLT--LVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLK 110

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 25/98 (25%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK-------------REIKI 172
           DY  + K+G G Y  V++G N  T         + V  KKI+             REI +
Sbjct: 1   DYTKIEKIGEGTYGVVYKGRNKKTG--------QIVAMKKIRLESEEEGVPSTAIREISL 52

Query: 173 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFK 210
           L+ L   PN+V L D++  Q S+   LIFE++ S D K
Sbjct: 53  LKEL-QHPNIVCLQDVLM-QESRL-YLIFEFL-SMDLK 86

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 27/128 (21%)

Query: 121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL-----KPVKKKKIKREIKILQN 175
           W   D Y+ +  VG G Y +V    +  T  +  IK L       +  K+  RE+++L++
Sbjct: 11  WEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKH 70

Query: 176 LCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP-------------TLTDYDIR 222
           +    NV+ LLD+       TP+   E  +  D  ++                L+D  I+
Sbjct: 71  MD-HENVIGLLDVF------TPASSLE--DFQDVYLVTHLMGADLNNIVKCQKLSDDHIQ 121

Query: 223 YYIYELLK 230
           + +Y++L+
Sbjct: 122 FLVYQILR 129

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 14/67 (20%), Positives = 36/67 (53%), Gaps = 6/67 (8%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCGGP 180
            YE+++++G+G + +V+     +  +  ++K      +   +++    E+KIL+ L   P
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHP 59

Query: 181 NVVKLLD 187
           N++K  +
Sbjct: 60  NIIKYYE 66

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 12/92 (13%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVKKKKIK----REIKILQNLC 177
           +   YE + K+G+G + EVF+  +  T +   +K +L   +K+       REIKILQ L 
Sbjct: 10  EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLL- 68

Query: 178 GGPNVVKLLDIVRDQHSK------TPSLIFEY 203
              NVV L++I R + +       +  L+FE+
Sbjct: 69  KHENVVNLIEICRTKATPYNRYKGSFYLVFEF 100

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 10/85 (11%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILK------PVKKKKIKREIKILQNLCGGP 180
           ++ V K+G G Y  V++  N  T E   +K ++       V    I REI +L+ L   P
Sbjct: 2   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHP 59

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYVN 205
           N+VKLLD++  +      L+FE+++
Sbjct: 60  NIVKLLDVIHTE--NKLYLVFEFLH 82

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 13/115 (11%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKIL-----KPVKKKKIKREIKILQNLCGGPN 181
           Y  ++ +GRG Y  V    N  TNE+  IK +       +  K+  REIK+L++L    N
Sbjct: 7   YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL-DHEN 65

Query: 182 VVKLLDIVRDQHSKTPS---LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLK 230
           V+ + DI+   H +  +   +++E ++ TD   +     TL+D   +Y++Y+LL+
Sbjct: 66  VIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLR 119

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 33/121 (27%), Positives = 69/121 (57%), Gaps = 12/121 (9%)

Query: 121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK----REIKILQNL 176
           +G  D YE + K+G G Y+ V++G +    +   +K+++  +++       RE  +L+ L
Sbjct: 1   FGKADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL 60

Query: 177 CGGPNVVKLLDIVRDQHSK-TPSLIFEYVNSTDFKVL--YP-TLTDYDIRYYIYELLKVM 232
               N+V L DI+   H+K T +L+FEYV++   + +  +P  L   +++ ++++LL+ +
Sbjct: 61  -KHANIVLLHDII---HTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGL 116

Query: 233 S 233
           S
Sbjct: 117 S 117

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 5/65 (7%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK----PVKKKKIKREIKILQNLCGGP 180
            D E V+ +G+G    V++  +  T +   +K +        +K++ RE+K L++ C  P
Sbjct: 1   SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRS-CESP 59

Query: 181 NVVKL 185
            VVK 
Sbjct: 60  YVVKC 64

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 16/69 (23%), Positives = 37/69 (53%), Gaps = 7/69 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK------PVKKKKIKREIKILQNLCG 178
            ++++ +K+G+G++S V++ I +       +K ++         ++   +EI +L+ L  
Sbjct: 2   GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-D 60

Query: 179 GPNVVKLLD 187
            PNV+K L 
Sbjct: 61  HPNVIKYLA 69

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK----PVKKKKIKREIKILQNLCGGP 180
           DDYE++  +G G  + V+  I +  NE+  IK +          ++++E++ + + C  P
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAM-SQCNHP 59

Query: 181 NVVK 184
           NVVK
Sbjct: 60  NVVK 63

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 28/126 (22%)

Query: 121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK------------R 168
           +G  + Y+ + K+G G Y+ V++G +  T +         V  K+I+            R
Sbjct: 1   FGKLETYKKLDKLGEGSYATVYKGRSKLTGQL--------VALKEIRLEHEEGAPFTAIR 52

Query: 169 EIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTD-YDIRYY 224
           E  +L++L    N+V L DI+  +  KT +L+FEY++ TD K            +++R +
Sbjct: 53  EASLLKDL-KHANIVTLHDIIHTK--KTLTLVFEYLD-TDLKQYMDDCGGGLSMHNVRLF 108

Query: 225 IYELLK 230
           +++LL+
Sbjct: 109 LFQLLR 114

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 39.6 bits (92), Expect = 8e-04
 Identities = 15/36 (41%), Positives = 26/36 (72%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK 159
           Q DYE++++VG G Y +V++  N++T E   +KI+K
Sbjct: 8   QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIK 43

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 11/116 (9%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGG 179
           + +EV+  VG G Y  V +  +  T E   IK  K  +     K+   RE+K+L+ L   
Sbjct: 1   NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTL-KQ 59

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL--YPTLTDYD-IRYYIYELLKVM 232
            N+V+L +  R +      L+FEYV     ++L   P     + +R YIY+L+K +
Sbjct: 60  ENIVELKEAFRRRGKLY--LVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAI 113

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 29/120 (24%), Positives = 65/120 (54%), Gaps = 10/120 (8%)

Query: 121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK----REIKILQNL 176
           +G    Y  + K+G G Y+ V++GI+    +   +K++    ++ +     RE  +L+ L
Sbjct: 1   FGAATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGL 60

Query: 177 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNS--TDFKVLYP-TLTDYDIRYYIYELLKVMS 233
               N+V L DI+  + + T   +FEY+++    + + +P  L  Y++R ++++LL+ ++
Sbjct: 61  -KHANIVLLHDIIHTKETLT--FVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLA 117

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK----IKREIKILQNLCGGP 180
           + + ++  +G+G + EV++ I+  TN+   IK++   + +     I++EI+ L   C  P
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQ-CRSP 59

Query: 181 NVVK 184
            + K
Sbjct: 60  YITK 63

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 10/119 (8%)

Query: 121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL-KPVKK----KKIKREIKILQN 175
           W   + Y  +++VG G Y  V   I+  T E+  IK L +P +     K+  RE+ +L++
Sbjct: 11  WELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKH 70

Query: 176 LCGGPNVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 230
           +    NV+ LLD+     S    +   L+  Y+ +   K++   L++  ++Y +Y++L 
Sbjct: 71  M-QHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLC 128

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 12/113 (10%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGG 179
           D++++ +VG+G Y +VF     +T E   +K +K        + + +  E  IL      
Sbjct: 2   DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT-TKS 60

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP---TLTDYDIRYYIYELL 229
             +VKLL   +D   +   L  EYV   DF+ L      L++   R+Y+ E+ 
Sbjct: 61  EWLVKLLYAFQD--DEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMF 111

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 20/117 (17%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-------KKKIKREIKILQNLCGG 179
           ++ + K+G G Y+ V++G N  T E   I  LK +             REI +++ L   
Sbjct: 2   FKQLEKLGEGTYATVYKGRNRTTGE---IVALKEIHLDAEEGTPSTAIREISLMKEL-KH 57

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------DIRYYIYELLK 230
            N+V+L D++  ++     L+FEY++  D K    T           ++ + Y+LLK
Sbjct: 58  ENIVRLHDVIHTENKLM--LVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLK 111

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 6/59 (10%)

Query: 131 RKVGRGKYSEVFEGINVNTNERCIIKILK-----PVKKKKIKREIKILQNLCGGPNVVK 184
            K+G G + +V+  +N++T E   +K ++     P   K+I  E+K+L+ L   PN+VK
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-KHPNLVK 63

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 12/121 (9%)

Query: 121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK----REIKILQNL 176
           +G  + Y  + K+G G Y+ VF+G +  T     +K ++   ++       RE+ +L+NL
Sbjct: 1   FGKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNL 60

Query: 177 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPT----LTDYDIRYYIYELLKVM 232
               N+V L DI+  +   T  L+FEY++S D K         ++ ++++ ++++LL+ +
Sbjct: 61  -KHANIVTLHDIIHTERCLT--LVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGL 116

Query: 233 S 233
           S
Sbjct: 117 S 117

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 37.5 bits (88), Expect = 0.003
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 9/87 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL---KPVKKKK---IKREIKILQNLCG 178
           DD+E ++ +G G +  V    +  + +   +KIL   K VK K+   +  E +ILQ++  
Sbjct: 1   DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR- 59

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVN 205
            P +V L      Q      L+ EYV 
Sbjct: 60  HPFLVNLYG--SFQDDSNLYLVMEYVP 84

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 6/83 (7%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIK-----ILKPVKKKKIKREIKILQNLCGGP 180
           DYEV+  +G+G +  V +    +  +  + K      +   +K+++  E+ IL+ L   P
Sbjct: 1   DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-KHP 59

Query: 181 NVVKLLDIVRDQHSKTPSLIFEY 203
           N+V+  D + D+ ++T  ++ EY
Sbjct: 60  NIVRYYDRIIDRSNQTLYIVMEY 82

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	252
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.95
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.95
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.94
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.93
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.9
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.9
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.9
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.9
KOG0198	313	consensus MEKK and related serine/threonine protei	99.9
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.89
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.89
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.89
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.89
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.89
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.89
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.89
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.89
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.89
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.88
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.88
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.88
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.88
KOG0605	550	consensus NDR and related serine/threonine kinases	99.88
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.88
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.88
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.88
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.88
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.87
KOG0610	459	consensus Putative serine/threonine protein kinase	99.87
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.87
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.87
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.87
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.87
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.87
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.87
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.87
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.87
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.87
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.86
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.86
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.86
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.86
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.86
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.86
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.86
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.86
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.86
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.86
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.86
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.86
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.86
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.86
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.85
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.85
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.85
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.85
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.85
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.85
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.85
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.85
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.85
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.85
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.85
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.85
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.85
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.85
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.85
KOG0586	596	consensus Serine/threonine protein kinase [General	99.85
KOG0589	426	consensus Serine/threonine protein kinase [General	99.85
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.84
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.84
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.84
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.84
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.84
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.84
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.84
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.84
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.84
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.84
KOG0578	550	consensus p21-activated serine/threonine protein k	99.84
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.84
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.84
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.84
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.84
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.84
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.84
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.84
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.84
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.84
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.83
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.83
PHA03212	391	serine/threonine kinase US3; Provisional	99.83
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.83
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.83
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.83
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.83
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.83
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.83
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.83
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.83
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.83
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.83
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.83
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.83
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.83
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.83
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.83
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.83
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.83
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.83
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.83
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.83
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.83
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.83
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.83
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.83
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.83
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.83
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.82
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.82
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.82
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.82
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.82
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.82
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.82
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.82
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.82
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.82
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.82
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.82
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.82
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.82
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.82
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.82
PTZ00284	467	protein kinase; Provisional	99.82
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.82
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.82
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.82
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.82
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.82
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.82
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.82
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.82
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.82
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.82
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.82
PTZ00267	478	NIMA-related protein kinase; Provisional	99.82
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.82
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.82
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.82
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.81
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.81
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.81
PTZ00036	440	glycogen synthase kinase; Provisional	99.81
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.81
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.81
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.81
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.81
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.81
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.81
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.81
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.81
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.81
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.81
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.81
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.81
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.81
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.81
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.81
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.81
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.81
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.81
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.81
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.81
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.81
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.81
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.81
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.81
PHA03209	357	serine/threonine kinase US3; Provisional	99.81
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.81
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.81
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.81
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.81
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.81
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.81
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.81
PTZ00283	496	serine/threonine protein kinase; Provisional	99.81
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.81
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.81
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.8
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.8
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.8
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.8
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.8
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.8
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.8
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.8
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.8
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.8
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.8
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.8
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.8
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.8
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.8
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.8
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.8
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.8
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.8
PHA03211	461	serine/threonine kinase US3; Provisional	99.8
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.8
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.8
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.8
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.8
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.8
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.8
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.8
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.8
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.8
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.8
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.8
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.8
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.8
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.79
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.79
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.79
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.79
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.79
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.79
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.79
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.79
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.79
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.79
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.79
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.79
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.79
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.79
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.79
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.79
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.79
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.79
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.79
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.79
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.79
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.79
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.79
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.79
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.79
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.79
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.78
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.78
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.78
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.78
PLN00009	294	cyclin-dependent kinase A; Provisional	99.78
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.78
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.78
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.78
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.78
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.78
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.78
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.78
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.78
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.78
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.78
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.78
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.78
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.78
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.78
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.78
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.78
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.78
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.78
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.78
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.78
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.78
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.78
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.78
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.78
PHA03207	392	serine/threonine kinase US3; Provisional	99.78
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.78
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.77
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.77
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.77
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.77
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.77
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.77
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.77
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.77
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.77
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.77
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.77
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.77
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.77
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.77
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.77
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.77
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.77
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.77
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.77
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.77
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.77
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.77
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.77
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.77
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.77
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.76
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.76
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.76
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.76
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.76
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.76
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.76
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.76
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.76
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.76
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.76
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.76
KOG1152	772	consensus Signal transduction serine/threonine kin	99.76
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.76
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.76
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.76
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.76
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.76
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.76
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.75
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.75
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.75
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.75
PHA02988	283	hypothetical protein; Provisional	99.75
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.75
PRK09188	365	serine/threonine protein kinase; Provisional	99.75
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.75
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.75
PHA03210	501	serine/threonine kinase US3; Provisional	99.75
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.75
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.75
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.75
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.75
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.74
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.74
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.74
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.74
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.74
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.74
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.74
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.74
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.74
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.73
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.73
KOG0584	632	consensus Serine/threonine protein kinase [General	99.73
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.73
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.73
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.73
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.73
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.73
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.72
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.72
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.72
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.72
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.72
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.71
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.71
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.71
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.71
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.71
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.7
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.7
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.7
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.7
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.69
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.69
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.69
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.68
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.68
PRK10345	210	hypothetical protein; Provisional	99.68
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.68
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.67
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.67
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.67
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.67
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.66
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.66
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.65
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.65
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.65
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.64
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.64
KOG3653	534	consensus Transforming growth factor beta/activin	99.63
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.63
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.61
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.61
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.59
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.58
smart00090	237	RIO RIO-like kinase.	99.57
PHA02882	294	putative serine/threonine kinase; Provisional	99.57
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.56
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.56
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.55
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.55
PRK14879	211	serine/threonine protein kinase; Provisional	99.54
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.54
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.53
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.53
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.52
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.51
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.5
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.5
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.48
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.45
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.42
PRK12274	218	serine/threonine protein kinase; Provisional	99.39
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.39
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.37
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.35
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.33
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.31
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.31
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.28
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.21
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.21
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.2
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.18
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.12
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.85
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.76
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.73
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.73
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.69
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.65
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.59
KOG1243	690	consensus Protein kinase [General function predict	98.59
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.51
KOG3087	229	consensus Serine/threonine protein kinase [General	98.45
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.45
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.42
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.35
PLN00181	793	protein SPA1-RELATED; Provisional	98.3
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.27
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.18
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.14
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.06
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.96
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.93
PRK10593	297	hypothetical protein; Provisional	97.93
PLN02876	822	acyl-CoA dehydrogenase	97.91
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.89
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.85
PF01636	239	APH: Phosphotransferase enzyme family This family	97.82
PRK09902	216	hypothetical protein; Provisional	97.74
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.65
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	97.58
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.54
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.41
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.41
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.27
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.16
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.14
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.96
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	96.96
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.94
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.73
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.49
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	96.2
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	96.12
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	95.95
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	95.8
KOG2270	520	consensus Serine/threonine protein kinase involved	95.68
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.55
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	95.26
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	95.26
KOG0576	829	consensus Mitogen-activated protein kinase kinase	94.85
PLN02756	418	S-methyl-5-thioribose kinase	94.73
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	94.7
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	94.42
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	94.37
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	93.83
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	93.82
KOG0606	1205	consensus Microtubule-associated serine/threonine	92.95
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	92.54
PRK12396	409	5-methylribose kinase; Reviewed	92.3
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	91.95
KOG2268	465	consensus Serine/threonine protein kinase [Signal	91.8
PRK05231	319	homoserine kinase; Provisional	91.18
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	90.89
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	90.38
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	88.91
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	87.48
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	87.14
PTZ00384	383	choline kinase; Provisional	86.5
COG3231	266	Aph Aminoglycoside phosphotransferase [Translation	84.93
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	83.61
PLN02236	344	choline kinase	83.26
TIGR02905	313	spore_yutH spore coat protein YutH. Members of thi	81.14
PF07914	414	DUF1679: Protein of unknown function (DUF1679); In	80.93
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	80.44
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	80.42

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.95  E-value=5.4e-28  Score=209.73  Aligned_cols=119  Identities=26%  Similarity=0.423  Sum_probs=110.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..++|.+.++||.|+||+||+|++++++..||||.+...     ..+.+..|+++|+.|+ |+|||+|++++.+++.  +
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~--i   84 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDF--I   84 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCe--E
Confidence            357899999999999999999999999999999999754     2556789999999999 9999999999999976  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||||||+||||.++|   +.++|..++.++.||+.||++||+++|||-+
T Consensus        85 ~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRD  134 (429)
T KOG0595|consen   85 YLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRD  134 (429)
T ss_pred             EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            9999999999999999   6899999999999999999999999999964

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.95  E-value=1.1e-28  Score=200.39  Aligned_cols=154  Identities=73%  Similarity=1.187  Sum_probs=147.8

Q ss_pred             CCCCccCccccccccCCCCccccCCCcccccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHH
Q 025443           91 LPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREI  170 (252)
Q Consensus        91 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei  170 (252)
                      ..+.|.+|++++++..++.+||+++...++|+..++|++.+++|.|-|+.||.|....++..++||++++-+.+.+.+|+
T Consensus         4 ~~v~s~ARvya~vn~~rp~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREi   83 (338)
T KOG0668|consen    4 MVVPSVARVYADVNEERPREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREI   83 (338)
T ss_pred             cccchhhhhhhhccccCchhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHH
Confidence            34678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          171 KILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       171 ~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      +||..|+|++||+.|++...++..+...||+||.++.|...+.+.++..+++.++.|++.||.|||++||.|-+
T Consensus        84 kIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRD  157 (338)
T KOG0668|consen   84 KILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRD  157 (338)
T ss_pred             HHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCccccc
Confidence            99999999999999999999999888999999999999999889999999999999999999999999999863

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=3.5e-26  Score=198.67  Aligned_cols=119  Identities=22%  Similarity=0.322  Sum_probs=108.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----------hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----------KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      ..+.|.+.+.||+|+||.|-+|..+.+|+.||||+++++.          ...+.+|++||++|+ |||||+++++|+.+
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~-HP~IV~~~d~f~~~  248 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS-HPNIVRIKDFFEVP  248 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC-CCCEEEEeeeeecC
Confidence            3577899999999999999999999999999999997532          234679999999999 99999999999999


Q ss_pred             CCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          193 HSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      +.  .||||||++||+|++.+   +.+.++.-+.+++|++.||.|||++||.|=+
T Consensus       249 ds--~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRD  301 (475)
T KOG0615|consen  249 DS--SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRD  301 (475)
T ss_pred             Cc--eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCccccc
Confidence            76  89999999999999999   6789999999999999999999999998854

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=4.8e-25  Score=199.50  Aligned_cols=118  Identities=19%  Similarity=0.406  Sum_probs=110.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .+|+..+.||+|||+.||++++..+|..||+|++.+.      ..+++.+||+|.+.|+ |||||+++++|++.++  +|
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~n--VY   94 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNN--VY   94 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCc--eE
Confidence            6799999999999999999999999999999999752      3577899999999999 9999999999999987  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+|+|+.|+|..++   +.++|.+++.|++||+.||.|||++||+|=+.
T Consensus        95 ivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDL  144 (592)
T KOG0575|consen   95 IVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDL  144 (592)
T ss_pred             EEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceeccc
Confidence            999999999999999   67999999999999999999999999999654

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.90  E-value=8.7e-24  Score=181.70  Aligned_cols=117  Identities=22%  Similarity=0.431  Sum_probs=109.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||+||+++.+++++.+|+|++++..      .+....|..||.+++ ||.||.++..|.+.+.  +
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~k--L  100 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEK--L  100 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCe--E
Confidence            688999999999999999999999999999999997632      567889999999999 9999999999999977  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      |||+||+.||+|+..|   +.|+|+.++.|+.+|+.||.|||++|||+-
T Consensus       101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyR  149 (357)
T KOG0598|consen  101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYR  149 (357)
T ss_pred             EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeec
Confidence            9999999999999999   589999999999999999999999999874

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.90  E-value=8.6e-24  Score=181.85  Aligned_cols=120  Identities=17%  Similarity=0.223  Sum_probs=109.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec----cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP----VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~----~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++.+.++.||+|+.|+||++.++.+++.+|+|++..    ...+++.+|+++++.++ ||+||.+||+|..++. .++|
T Consensus        78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~-spyIV~~ygaF~~~~~-~isI  155 (364)
T KOG0581|consen   78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQ-SPYIVGFYGAFYSNGE-EISI  155 (364)
T ss_pred             HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCC-CCCeeeEeEEEEeCCc-eEEe
Confidence            4678888999999999999999999999999999943    34678999999999998 9999999999999873 5999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      +||||+||+|.+++   ++++|..+..++.+|++||.|||+ ++|||=++
T Consensus       156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDI  205 (364)
T KOG0581|consen  156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDI  205 (364)
T ss_pred             ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccC
Confidence            99999999999999   679999999999999999999995 99999654

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=3.5e-24  Score=190.23  Aligned_cols=120  Identities=28%  Similarity=0.455  Sum_probs=108.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .+.|+.+++||+|+||.||+|++..+|+.||+|.++...     .....+||.||++|+ ||||++|.+...+...+.+|
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~-HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLD-HPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcC-CCcccceeeEEEecCCceEE
Confidence            478999999999999999999999999999999997543     456789999999999 99999999999988545699


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+|||+ -||..++    -.|++.++++|+.||+.||+|||++||+|=++
T Consensus       195 lVFeYMd-hDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDI  244 (560)
T KOG0600|consen  195 LVFEYMD-HDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDI  244 (560)
T ss_pred             EEEeccc-chhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccc
Confidence            9999998 5888888    26999999999999999999999999999765

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=2.3e-23  Score=185.76  Aligned_cols=120  Identities=26%  Similarity=0.387  Sum_probs=110.8

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      ..++|.+++.||+|+||+|++|.+..++..||+|+++.+        ..+.+.+|+.+++.++.||||+++++++.....
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            367899999999999999999999999999999987653        245677999999999889999999999999976


Q ss_pred             ceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          195 KTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                        +|||||||.||+|++++   +++.|.+++.+++||+.||+|||++||||.+
T Consensus        95 --~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRD  145 (370)
T KOG0583|consen   95 --IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRD  145 (370)
T ss_pred             --EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCC
Confidence              99999999999999999   7899999999999999999999999999975

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.90  E-value=3.3e-23  Score=179.38  Aligned_cols=122  Identities=21%  Similarity=0.358  Sum_probs=108.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ..+|..++.||+|+||.||++.+.++|..+|||.+....   .+.+.+|+.+|++|+ |+|||+++|.........++|.
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~~i~   94 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEYNIF   94 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeeeEee
Confidence            345778899999999999999999999999999997655   556899999999999 9999999997554431359999


Q ss_pred             ecCCCCCCHHhHc---c-CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY---P-TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l---~-~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||+.||+|.+++   + .+++..++.+.+||++||+|||++|||||++=
T Consensus        95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK  144 (313)
T KOG0198|consen   95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIK  144 (313)
T ss_pred             eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcc
Confidence            9999999999999   3 69999999999999999999999999999764

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.1e-22  Score=181.14  Aligned_cols=118  Identities=27%  Similarity=0.387  Sum_probs=108.0

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++++.||+|+||.||+|++..+++.||||+++..      ....+.+|+.+|..++ |+||+++++++.+++.  +|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~--~~   77 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD-NPWVVKLYYSFQDENY--LY   77 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCe--EE
Confidence            4799999999999999999999999999999999743      2345778999999999 9999999999999866  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||++.
T Consensus        78 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dl  127 (364)
T cd05599          78 LIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDI  127 (364)
T ss_pred             EEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence            999999999999998   56899999999999999999999999999854

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.89  E-value=4.7e-24  Score=185.44  Aligned_cols=118  Identities=18%  Similarity=0.390  Sum_probs=110.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..+|++.+.||+|+||+|-+|.+...|+.||||.|++..      .-.+.+||+||..|+ ||||+++|++|+..+.  +
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN-HPhII~IyEVFENkdK--I  128 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN-HPHIIQIYEVFENKDK--I  128 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC-CCceeehhhhhcCCce--E
Confidence            568999999999999999999999999999999997643      335789999999999 9999999999999976  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      .|||||..+|+|++|+   +.++|.+++.|++||..|+.|||.++|||-+
T Consensus       129 vivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRD  178 (668)
T KOG0611|consen  129 VIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRD  178 (668)
T ss_pred             EEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecc
Confidence            9999999999999999   7899999999999999999999999999964

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.4e-22  Score=181.37  Aligned_cols=118  Identities=21%  Similarity=0.307  Sum_probs=107.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++++.||+|+||.||++.+..+++.||||++...      ..+.+.+|+++++.++ |+|||++++++.+++.  +|
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~--~~   77 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD-SPWVVSLYYSFQDAQY--LY   77 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCe--eE
Confidence            4699999999999999999999999999999998642      2356788999999999 9999999999998866  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||+||+|.+++   +.+++..++.++.|++.||+|||++||||.+.
T Consensus        78 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDl  127 (377)
T cd05629          78 LIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDI  127 (377)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            999999999999998   56899999999999999999999999999853

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.89  E-value=3.6e-22  Score=177.31  Aligned_cols=118  Identities=20%  Similarity=0.289  Sum_probs=105.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|+.++.||+|+||.||+|.+..+++.||||++....    .+.+.+|+++++.++ |+||+++++++.+.+.  +|+
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~l  149 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVN-HPNVVKCHDMFDHNGE--IQV  149 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCC-CCCcceeeeEeccCCe--EEE
Confidence            467888899999999999999999999999999996432    456889999999999 9999999999988865  999


Q ss_pred             EecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||++|+|.+.. ...+..+..++.||+.||+|||++||||.+.
T Consensus       150 v~e~~~~~~L~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  194 (353)
T PLN00034        150 LLEFMDGGSLEGTH-IADEQFLADVARQILSGIAYLHRRHIVHRDI  194 (353)
T ss_pred             EEecCCCCcccccc-cCCHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence            99999999997653 4678888999999999999999999999854

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.89  E-value=4.9e-23  Score=181.90  Aligned_cols=122  Identities=26%  Similarity=0.423  Sum_probs=110.6

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------------hHHHHHHHHHHHhcCCCCcceee
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------------KKKIKREIKILQNLCGGPNVVKL  185 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------------~~~~~~Ei~il~~l~~h~nIv~l  185 (252)
                      ..+.|++++.||+|.||+|.+|.+..+++.||||++.+..                 .++..+||.||++|. |+|||+|
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~-H~nVV~L  173 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH-HPNVVKL  173 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC-CcCeeEE
Confidence            4688999999999999999999999999999999996421                 357899999999999 9999999


Q ss_pred             eeEEEcCCCceeEEEecCCCCCCHHhHc--cC-CCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          186 LDIVRDQHSKTPSLIFEYVNSTDFKVLY--PT-LTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       186 ~~~~~~~~~~~~~lV~E~~~gg~L~~~l--~~-l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +++..++..+.+|||+|||..|.+...-  .. +++.+++.|+++++.||+|||.+||||-++
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDI  236 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDI  236 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeecccc
Confidence            9999998888899999999999987554  34 999999999999999999999999999765

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.89  E-value=2.3e-22  Score=179.90  Aligned_cols=118  Identities=22%  Similarity=0.293  Sum_probs=107.8

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .+|++++.||+|+||.||+|++..+++.||||++...      ....+.+|+++|+.++ |+||+++++.+.+++.  +|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~--~~   77 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD-NEWVVKLYYSFQDKDN--LY   77 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCE--EE
Confidence            3699999999999999999999999999999999642      2456789999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||++.
T Consensus        78 lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDl  127 (376)
T cd05598          78 FVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDI  127 (376)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence            999999999999998   56899999999999999999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.89  E-value=1.7e-22  Score=180.92  Aligned_cols=121  Identities=26%  Similarity=0.382  Sum_probs=111.8

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      ....+|.+++.||+|+|++|++|+++++++.+|||++.+.      +.+-+.+|-.+|..|.+||.|++||-.|.+... 
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s-  148 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES-  148 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc-
Confidence            3468899999999999999999999999999999999653      345578999999999779999999999999987 


Q ss_pred             eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          196 TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                       +|+|+||+++|+|.++|   +.|++..++.|+.||+.||+|||++||||=+
T Consensus       149 -LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRD  199 (604)
T KOG0592|consen  149 -LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRD  199 (604)
T ss_pred             -eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceecc
Confidence             99999999999999999   7899999999999999999999999999964

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.89  E-value=3.3e-22  Score=178.22  Aligned_cols=118  Identities=25%  Similarity=0.348  Sum_probs=107.9

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++++.||+|+||+||+|.+..+++.||+|+++...      ...+.+|+.++..++ |+||+++++.+.+...  +|
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~-~~~iv~~~~~~~~~~~--~~   77 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD-SLWVVKMFYSFQDKLN--LY   77 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCe--EE
Confidence            47999999999999999999999999999999997532      346788999999999 9999999999998866  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus        78 lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDl  127 (363)
T cd05628          78 LIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDI  127 (363)
T ss_pred             EEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCC
Confidence            999999999999998   57999999999999999999999999999854

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.89  E-value=3.5e-22  Score=179.26  Aligned_cols=117  Identities=21%  Similarity=0.298  Sum_probs=107.1

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .|++++.||+|+||+||+|.+..+++.||+|+++...      .+.+.+|+++++.++ |+||+++++++.+.+.  +||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~l~~~~~~~~~--~~l   78 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD-NEWVVKLYYSFQDKDN--LYF   78 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC-CCCeeeeEEEEecCCE--EEE
Confidence            5899999999999999999999999999999996532      346789999999999 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||+||+|.+++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus        79 v~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDl  127 (381)
T cd05626          79 VMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDI  127 (381)
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCC
Confidence            99999999999998   56899999999999999999999999999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.88  E-value=2.1e-23  Score=187.58  Aligned_cols=117  Identities=21%  Similarity=0.388  Sum_probs=109.1

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++|.+.+.||+|+||.||+|+.+.+.+.||||.+.+..     .+.+.+|++|++.|+ |||||.++++|++..+  +|+
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~--~~v   78 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLK-HPNIVEMLESFETSAH--LWV   78 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcC-CcchhhHHHhhcccce--EEE
Confidence            57888899999999999999999999999999997643     456899999999999 9999999999999976  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |.|||.| +|+.+|   +.++|+.++.++.|++.||.|||+.+|+||+.
T Consensus        79 Vte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~  126 (808)
T KOG0597|consen   79 VTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDM  126 (808)
T ss_pred             Eehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccC
Confidence            9999985 999999   78999999999999999999999999999975

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.88  E-value=4.6e-22  Score=175.03  Aligned_cols=120  Identities=19%  Similarity=0.284  Sum_probs=109.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||+|+++..      ..+.+.+|+.+++.++ |+||+++++++.+++.  +
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~--~   93 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFIVNMMCSFQDENR--V   93 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEcCCE--E
Confidence            67899999999999999999999999999999999743      2456889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |+||||+.||+|.+++   ..+++..++.++.||+.||+|||++||+|++..
T Consensus        94 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlk  145 (329)
T PTZ00263         94 YFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLK  145 (329)
T ss_pred             EEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            9999999999999998   568999999999999999999999999998653

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.88  E-value=2.8e-22  Score=179.16  Aligned_cols=120  Identities=25%  Similarity=0.398  Sum_probs=111.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ....|++.+.||.|.||.||+|+++.+|+.+|+|.+.+..      ...+.+|+.+|+++.+|||||+++++|++...  
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~--  110 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS--  110 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe--
Confidence            3578999999999999999999999999999999997643      35789999999999999999999999999976  


Q ss_pred             eEEEecCCCCCCHHhHc-cC-CCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          197 PSLIFEYVNSTDFKVLY-PT-LTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-~~-l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ++||||+|+||+|++.+ .. ++|.++..+++||+.|+.|||++||||-+
T Consensus       111 ~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrD  160 (382)
T KOG0032|consen  111 VYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRD  160 (382)
T ss_pred             EEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceecc
Confidence            99999999999999999 44 99999999999999999999999999974

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.88  E-value=1.2e-22  Score=170.30  Aligned_cols=116  Identities=18%  Similarity=0.366  Sum_probs=108.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|+.++.||.|+||.|.+++++.+|..+|+|++++++      .+...+|..+|+.+. ||+++++++.|.+...  +
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~--l  119 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSN--L  119 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCe--E
Confidence            688999999999999999999999999999999998654      456789999999999 9999999999999976  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeE
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVL  242 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~  242 (252)
                      ||||||.+||.|+.++   ++|++..++.|+.||+.||+|||+++||.
T Consensus       120 ymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiY  167 (355)
T KOG0616|consen  120 YMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIY  167 (355)
T ss_pred             EEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeee
Confidence            9999999999999999   68999999999999999999999999953

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.88  E-value=1.8e-22  Score=180.56  Aligned_cols=120  Identities=29%  Similarity=0.398  Sum_probs=111.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..++|++++.||+|+||.||+|+-+.||..+|+|++++..      ...++.|-++|.... +++||+||..|.+.+.  
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~d-s~~vVKLyYsFQD~~~--  215 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVD-SPWVVKLYYSFQDKEY--  215 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcC-CCcEEEEEEEecCCCe--
Confidence            3689999999999999999999999999999999998643      566889999999977 9999999999999977  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||||++|||+..+|   +.|++++++.|+.+++.|++.||+.|+||=++
T Consensus       216 LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDI  267 (550)
T KOG0605|consen  216 LYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDI  267 (550)
T ss_pred             eEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccC
Confidence            99999999999999999   78999999999999999999999999999653

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.88  E-value=4.9e-22  Score=178.22  Aligned_cols=117  Identities=21%  Similarity=0.277  Sum_probs=107.2

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      +|++++.||+|+||.||+|++..+++.||+|++....      .+.+.+|+++++.++ |+|||++++.+.+++.  +||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~-h~~iv~~~~~~~~~~~--~~l   78 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDN--LYF   78 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC-CCcCCeEEEEEEeCCE--EEE
Confidence            6899999999999999999999999999999997532      356889999999999 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||+||+|.+++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus        79 v~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDl  127 (382)
T cd05625          79 VMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDI  127 (382)
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            99999999999998   56899999999999999999999999999854

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.88  E-value=5.3e-23  Score=174.95  Aligned_cols=121  Identities=23%  Similarity=0.359  Sum_probs=109.4

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchH-----HHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKK-----KIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~-----~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ...++|+.+++|++|+||.||+|+++.|++.||+|+++.+..+     ...+||.+|.+++ |+|||.+.++....+-+.
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~-H~NIV~vkEVVvG~~~d~  151 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKAR-HPNIVEVKEVVVGSNMDK  151 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcC-CCCeeeeEEEEeccccce
Confidence            3467899999999999999999999999999999999865432     3579999999999 999999999998777667


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      +|||||||+ -||..++    ++|...+++.++.|++.||+|||.+.|+|=+
T Consensus       152 iy~VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRD  202 (419)
T KOG0663|consen  152 IYIVMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRD  202 (419)
T ss_pred             eeeeHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecc
Confidence            999999998 6999998    6899999999999999999999999999864

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=3.5e-22  Score=172.69  Aligned_cols=118  Identities=17%  Similarity=0.287  Sum_probs=107.4

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++...      ..+.+.+|+.+++.++ |+||+++++++.+.+.  +|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~--~~   77 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLFWTEHDQRF--LY   77 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC-CCcHhhhHhhhccCCe--EE
Confidence            4689999999999999999999999999999999643      2346789999999999 9999999999988865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||+.||+|.+++   +.+++..+..++.||+.||+|||++||+|.+.
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  127 (291)
T cd05612          78 MLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDL  127 (291)
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence            999999999999998   56899999999999999999999999999854

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=9.9e-22  Score=172.99  Aligned_cols=118  Identities=25%  Similarity=0.412  Sum_probs=107.9

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++++.||+|+||.||+|.+..+++.||||+++..      ..+.+.+|++++..++ |+||+++++++.+.+.  +|
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~--~~   77 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK-SEWLVKLLYAFQDDEY--LY   77 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC-CCCCccEEEEEEcCCE--EE
Confidence            4699999999999999999999999999999999743      2456789999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||++||+|.+++   +.+++..++.++.||+.||.|||++||||.+.
T Consensus        78 lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  127 (333)
T cd05600          78 LAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDL  127 (333)
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            999999999999998   56899999999999999999999999999854

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.87  E-value=2.3e-22  Score=166.41  Aligned_cols=116  Identities=32%  Similarity=0.500  Sum_probs=106.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++|...++||+|.||.||+|++..+|+.||||.|+..+     .....+||+.|+.++ |+||+.+.++|-..+.  +.|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~-h~nIi~LiD~F~~~~~--l~l   78 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELK-HPNIIELIDVFPHKSN--LSL   78 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHcc-CcchhhhhhhccCCCc--eEE
Confidence            46888899999999999999999999999999998643     345789999999999 9999999999999877  999


Q ss_pred             EecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          200 IFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       200 V~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |+|||+ .||+..+    ..++..+++.|+.++++||+|||++.|+|=+
T Consensus        79 VfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRD  126 (318)
T KOG0659|consen   79 VFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRD  126 (318)
T ss_pred             EEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence            999998 7999999    4589999999999999999999999999964

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.87  E-value=1.3e-22  Score=176.69  Aligned_cols=115  Identities=20%  Similarity=0.300  Sum_probs=107.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||.|.-|+||+|+...++..+|+|++.++.      ..++..|-+||..++ ||.++.||..|+.+..  .
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD-HPFlPTLYa~fet~~~--~  152 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD-HPFLPTLYASFETDKY--S  152 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC-CCccchhhheeeccce--e
Confidence            578999999999999999999999999999999997643      457889999999999 9999999999999966  9


Q ss_pred             EEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 025443          198 SLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTV  241 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV  241 (252)
                      |||||||.||||+.++     +.|++..++.|+.+|+.||+|||-+|||
T Consensus       153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGiv  201 (459)
T KOG0610|consen  153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIV  201 (459)
T ss_pred             EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhcee
Confidence            9999999999999999     5699999999999999999999999995

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.87  E-value=4.5e-22  Score=176.51  Aligned_cols=116  Identities=18%  Similarity=0.295  Sum_probs=102.4

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcE-EEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNER-CIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~-vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      +...+.+.||+|+||+||+|.+  .|.. ||+|++....     .+.|.+|+.+|.+++ |||||+|+|++.++.. .++
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~-HpNIV~f~G~~~~~~~-~~~  116 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLR-HPNIVQFYGACTSPPG-SLC  116 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCC-ceE
Confidence            4455566799999999999999  4555 9999997543     558999999999999 9999999999998861 389


Q ss_pred             EEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCC-CeEEe
Q 025443          199 LIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWS-TVLCY  244 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~-IV~~~  244 (252)
                      |||||+++|+|.+++     ..++...+..|+.||++||+|||+++ |||.+
T Consensus       117 iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrD  168 (362)
T KOG0192|consen  117 IVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRD  168 (362)
T ss_pred             EEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecc
Confidence            999999999999999     46999999999999999999999999 88875

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=1.6e-21  Score=171.75  Aligned_cols=118  Identities=23%  Similarity=0.309  Sum_probs=107.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++++.||+|+||.||++.+..+++.||+|++...      ..+.+.+|+.++..++ |+||+.+++++.+++.  +|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~--~~   77 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGD-RRWITNLHYAFQDENN--LY   77 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCceEEEEecCCe--EE
Confidence            4799999999999999999999999999999999642      2345788999999998 9999999999998866  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||++||+|.+++    ..+++..++.++.||+.||+|||++||||.+.
T Consensus        78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  128 (331)
T cd05597          78 LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDI  128 (331)
T ss_pred             EEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCC
Confidence            999999999999998    36899999999999999999999999999854

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.87  E-value=1.8e-21  Score=173.32  Aligned_cols=118  Identities=26%  Similarity=0.381  Sum_probs=107.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++++.||+|+||.||++.+..+++.||+|+++..      ....+.+|+.++..++ |+||+++++.+.+.+.  +|
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~--~~   77 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD-GAWVVKMFYSFQDKRN--LY   77 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCE--EE
Confidence            4689999999999999999999999999999999642      2456788999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||++.
T Consensus        78 lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDL  127 (360)
T cd05627          78 LIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDI  127 (360)
T ss_pred             EEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCC
Confidence            999999999999998   56899999999999999999999999999854

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.87  E-value=1.1e-22  Score=171.12  Aligned_cols=117  Identities=29%  Similarity=0.451  Sum_probs=104.4

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      +.|+.+.++|+|+||.||+|+++.||+.||||++-...     .+-..+||++|++|+ |+|+|.|+++|.....  ++|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLk-H~NLVnLiEVFrrkrk--lhL   78 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLK-HENLVNLIEVFRRKRK--LHL   78 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHhcce--eEE
Confidence            57888999999999999999999999999999996433     345789999999999 9999999999999866  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |+|||+..-|+++-   +.++++.++.|+.|+++|+.|+|+++|||-+
T Consensus        79 VFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRD  126 (396)
T KOG0593|consen   79 VFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRD  126 (396)
T ss_pred             EeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeeccc
Confidence            99999976665554   6799999999999999999999999999864

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=2.6e-23  Score=183.55  Aligned_cols=120  Identities=27%  Similarity=0.429  Sum_probs=108.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hH--HHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KK--KIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~--~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ..++|.++++||.|+||.||+|+.+.+|..||||.++...  .+  .-.||++.|++|+.|+|||+|.+++.+.+. .+|
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~-~L~   86 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR-ILY   86 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc-eEe
Confidence            3689999999999999999999999999999999997532  22  246999999999999999999999999872 599


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      +|||||+ .+|++++    +.|++.+++.|+.||++||+|+|.+|+.|=+
T Consensus        87 fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRD  135 (538)
T KOG0661|consen   87 FVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRD  135 (538)
T ss_pred             eeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence            9999998 7999999    5699999999999999999999999998853

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.2e-21  Score=177.16  Aligned_cols=116  Identities=21%  Similarity=0.333  Sum_probs=102.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCc---E-EEEEEeec------cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNE---R-CIIKILKP------VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~-vAvK~i~~------~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      ++-.+.++||+|+||.||+|..+..+.   . ||+|..+.      ....++.+|+++|+.++ |+|||++||+.....+
T Consensus       157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~-H~NVVr~yGVa~~~~P  235 (474)
T KOG0194|consen  157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN-HPNVVRFYGVAVLEEP  235 (474)
T ss_pred             cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCc
Confidence            445556899999999999999876533   3 89999974      23567999999999999 9999999999999988


Q ss_pred             ceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          195 KTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                        ++||||+|.||+|.++|    +.++..+...++.+.+.||+|||+++++|=
T Consensus       236 --l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHR  286 (474)
T KOG0194|consen  236 --LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHR  286 (474)
T ss_pred             --cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcch
Confidence              99999999999999999    248999999999999999999999999994

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.87  E-value=3.9e-21  Score=166.89  Aligned_cols=120  Identities=26%  Similarity=0.460  Sum_probs=107.0

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      +..++|++.+.||+|+||.||+|.+..+++.||||+++...    ...+.+|+.+++.++ |+||+++++++.++..  .
T Consensus         2 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~--~   78 (303)
T cd07869           2 GKADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLK-HANIVLLHDIIHTKET--L   78 (303)
T ss_pred             CccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCC-CCCcCeEEEEEecCCe--E
Confidence            45788999999999999999999999999999999996432    345778999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+||||++ ++|.+++    +.+++..++.++.||+.||+|||++||||++.
T Consensus        79 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dl  129 (303)
T cd07869          79 TLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDL  129 (303)
T ss_pred             EEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            99999996 6887777    45899999999999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=2.3e-21  Score=171.31  Aligned_cols=118  Identities=25%  Similarity=0.424  Sum_probs=108.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||+|.+..+++.||||+++..      ....+.+|++++..++ |+||+++++++.+++.  +|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~--~~   77 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD-SPWIVKLYYSFQDEEH--LY   77 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC-CCCccchhhheecCCe--EE
Confidence            4799999999999999999999999999999999742      2456889999999999 9999999999998866  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||++||+|.+++   +.+++..++.++.||+.||+|||++||+|.+.
T Consensus        78 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dl  127 (350)
T cd05573          78 LVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDI  127 (350)
T ss_pred             EEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            999999999999998   47999999999999999999999999999854

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.87  E-value=2.8e-21  Score=172.93  Aligned_cols=119  Identities=18%  Similarity=0.272  Sum_probs=108.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||++.+..++..||+|+++..      ....+.+|+.+++.++ |+||+++++++.+...  +
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-h~~iv~~~~~~~~~~~--~  118 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN-SEWIVQLHYAFQDDKY--L  118 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCE--E
Confidence            57899999999999999999999999999999999642      2345778999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++  ..+++..+..++.||+.||+|||++||||.+.
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDL  168 (370)
T cd05596         119 YMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDV  168 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            9999999999999998  56899999999999999999999999999854

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.86  E-value=4.3e-21  Score=165.54  Aligned_cols=120  Identities=25%  Similarity=0.455  Sum_probs=106.8

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      +..++|++.+.||+|+||.||+|.+..++..||+|+++..    ....+.+|+.+++.++ |+||+++++++.+.+.  .
T Consensus         2 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~--~   78 (288)
T cd07871           2 GKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLK-HANIVTLHDIIHTERC--L   78 (288)
T ss_pred             CccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCC-CCCEeeEEEEEcCCCe--E
Confidence            3467899999999999999999999999999999999643    2346789999999999 9999999999988765  9


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++||||++ |+|.+++    ..+++..+..++.||+.||+|||++||||.+.
T Consensus        79 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dl  129 (288)
T cd07871          79 TLVFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDL  129 (288)
T ss_pred             EEEEeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            99999998 5899888    34789999999999999999999999999854

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.86  E-value=3.4e-21  Score=172.42  Aligned_cols=119  Identities=20%  Similarity=0.294  Sum_probs=108.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||++.+..+++.+|+|++...      ..+.+.+|+.+++.++ |+||+++++++.++..  +
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~--~  118 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFCAFQDDKY--L  118 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCE--E
Confidence            57899999999999999999999999999999999642      2345779999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++  ..+++..++.++.||+.||+|||++||+|.+.
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDL  168 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV  168 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            9999999999999999  56899999999999999999999999999854

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.86  E-value=4.5e-21  Score=168.88  Aligned_cols=118  Identities=23%  Similarity=0.295  Sum_probs=106.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||++++..+++.||+|++...      ....+.+|+.++..++ |+||+++++++.+.+.  +|
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~l~~~~~~~~~--~~   77 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGD-CQWITTLHYAFQDENY--LY   77 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCE--EE
Confidence            4799999999999999999999999999999999642      1345778999999998 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||+.||+|.+++    ..+++..++.++.|++.||+|||++||+|++.
T Consensus        78 lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDl  128 (331)
T cd05624          78 LVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDI  128 (331)
T ss_pred             EEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence            999999999999998    36899999999999999999999999999854

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.86  E-value=3.4e-21  Score=164.15  Aligned_cols=120  Identities=15%  Similarity=0.196  Sum_probs=106.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc---CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV---NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..+|++.+.||+|+||.||+|.+.   ..+..||+|.++...    ...+.+|+.++..++ |+||+++++++..++.  
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~--   80 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFD-HSNIVRLEGVITRGNT--   80 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEecCCC--
Confidence            467999999999999999999875   346789999987542    346789999999998 9999999999998866  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .+|||||+++|+|.+++    ..+++..+..++.||+.||+|||++||+|++..
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dik  134 (266)
T cd05064          81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLA  134 (266)
T ss_pred             cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccc
Confidence            99999999999999998    368999999999999999999999999999653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.86  E-value=3.2e-21  Score=170.72  Aligned_cols=119  Identities=18%  Similarity=0.300  Sum_probs=106.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC-cEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN-ERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++.+.||+|+||.||+|.+..++ ..||+|++...      ..+.+.+|+.+++.++ |+||+++++++.+.+.  
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~--  105 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN-HPFCVNLYGSFKDESY--  105 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCCcceEEEEEeCCE--
Confidence            578999999999999999999976655 68999998642      2456789999999999 9999999999998865  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||||+.||+|.+++   ..+++..++.++.||+.||+|||++||||++.
T Consensus       106 ~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDL  157 (340)
T PTZ00426        106 LYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDL  157 (340)
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCC
Confidence            99999999999999998   56899999999999999999999999999864

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.86  E-value=5.1e-21  Score=168.15  Aligned_cols=118  Identities=22%  Similarity=0.281  Sum_probs=107.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||++.+..+++.||+|+++..      ..+.+.+|+.+++.++ |+||+++++++.+.+.  +|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-~~~i~~~~~~~~~~~~--~~   77 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN-SPWIPQLQYAFQDKDN--LY   77 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCe--EE
Confidence            4699999999999999999999999999999999753      2356789999999998 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||++||+|.+++    ..+++..++.++.||+.||+|||++||+|++.
T Consensus        78 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dl  128 (330)
T cd05601          78 LVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDI  128 (330)
T ss_pred             EEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccC
Confidence            999999999999998    46899999999999999999999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.86  E-value=4.8e-21  Score=164.97  Aligned_cols=117  Identities=21%  Similarity=0.224  Sum_probs=105.1

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .|+..+.||+|+||.||+|.+..+++.||+|.+....      ...+.+|+++++.++ |+||+.+++++.+++.  +++
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~iv~~~~~~~~~~~--~~l   77 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN-SRFVVSLAYAYETKDA--LCL   77 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEEEEEccCCe--EEE
Confidence            3788999999999999999999999999999986432      235678999999999 9999999999998866  999


Q ss_pred             EecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||+||+|.+++     ..+++..+..++.|++.||+|||++||||++.
T Consensus        78 v~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~di  128 (285)
T cd05631          78 VLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDL  128 (285)
T ss_pred             EEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCC
Confidence            99999999998877     25899999999999999999999999999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=2.3e-22  Score=164.20  Aligned_cols=118  Identities=22%  Similarity=0.341  Sum_probs=109.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|-||.||+|+.++++-.||+|++.+++      ..++.+|++|...|+ ||||.++|++|.+...  +
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~-hpnilrlY~~fhd~~r--i   97 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR-HPNILRLYGYFHDSKR--I   97 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC-CccHHhhhhheeccce--e
Confidence            788999999999999999999999999999999997643      467899999999999 9999999999999976  9


Q ss_pred             EEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          198 SLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ||++||..+|+|+..|     .++++.....|+.|++.||.|+|.++|+|=+
T Consensus        98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRd  149 (281)
T KOG0580|consen   98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRD  149 (281)
T ss_pred             EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCC
Confidence            9999999999999998     4699999999999999999999999999853

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=6.1e-21  Score=164.34  Aligned_cols=117  Identities=20%  Similarity=0.217  Sum_probs=105.1

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      +|++.+.||+|+||+||++.+..+++.||+|++....      ...+.+|+.+++.++ |+||+.+++.+.+++.  +|+
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~l   77 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDA--LCL   77 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC-CCCEeeeeeeecCCCe--EEE
Confidence            4889999999999999999999899999999996432      234678999999999 9999999999998866  999


Q ss_pred             EecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||++||+|.+++     ..+++..+..++.|++.||.|||++||||.+.
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  128 (285)
T cd05605          78 VLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDL  128 (285)
T ss_pred             EEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCC
Confidence            99999999999887     35899999999999999999999999999854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.86  E-value=4.3e-21  Score=168.43  Aligned_cols=112  Identities=19%  Similarity=0.267  Sum_probs=101.7

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||+|.+..+|+.||||+++..      ....+.+|+.+++.++ |+||+++++++.+.+.  +||||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~--~~lv~e~~   77 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR-HPFLTALKYSFQTHDR--LCFVMEYA   77 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEcCCE--EEEEEeCC
Confidence            3699999999999999999999999999743      2345778999999999 9999999999998866  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+|.+++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDl  121 (323)
T cd05571          78 NGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDL  121 (323)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence            999999998   56899999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.86  E-value=9e-21  Score=166.35  Aligned_cols=118  Identities=19%  Similarity=0.227  Sum_probs=105.2

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      +|++++.||+|+||.||+|.+..+++.||||+++..      ..+.+..|++++..++.|++|+.+++++.+.+.  +||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~--~~l   78 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR--LYF   78 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCE--EEE
Confidence            588999999999999999999999999999999742      245678899999999845678899999988865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||++||+|.+++   ..+++..+..++.||+.||+|||++||||++.
T Consensus        79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dl  127 (324)
T cd05587          79 VMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL  127 (324)
T ss_pred             EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            99999999999988   56899999999999999999999999999864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.86  E-value=5.3e-21  Score=167.87  Aligned_cols=112  Identities=19%  Similarity=0.268  Sum_probs=101.4

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||++.+..+|..||+|+++..      ....+.+|+++++.++ |+||+++++++.+.+.  +||||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~i~~~~~~~~~~~~--~~lv~E~~   77 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDR--LCFVMEYA   77 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCE--EEEEEeCC
Confidence            4699999999999999999999999999743      2345678999999999 9999999999998865  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+|..++   ..+++..++.++.||+.||+|||++||||++.
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dl  121 (323)
T cd05595          78 NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI  121 (323)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            999999888   46899999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=2.8e-21  Score=172.01  Aligned_cols=121  Identities=17%  Similarity=0.242  Sum_probs=106.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .+++|.....||+|+||.||+|... +|..||||++....   .++|.+|+.++.+++ |+|+|+|+|||.+.+. ..+|
T Consensus        73 AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~e~~~-~~~L  149 (361)
T KOG1187|consen   73 ATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLR-HPNLVKLLGYCLEGGE-HRLL  149 (361)
T ss_pred             HHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCC-CcCcccEEEEEecCCc-eEEE
Confidence            4688999999999999999999884 45899999987643   567999999999999 9999999999998862 3899


Q ss_pred             EecCCCCCCHHhHc----c-CCCHHHHHHHHHHHHHHHHHHHHCC---CeEEeee
Q 025443          200 IFEYVNSTDFKVLY----P-TLTDYDIRYYIYELLKVMSIFIRWS---TVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l----~-~l~~~~~~~i~~qi~~aL~yLH~~~---IV~~~~~  246 (252)
                      |+|||.+|+|.++|    . .++|....+|+.++++||+|||+..   |||-++-
T Consensus       150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiK  204 (361)
T KOG1187|consen  150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIK  204 (361)
T ss_pred             EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCC
Confidence            99999999999999    3 7899999999999999999999955   6665543

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.86  E-value=7.6e-21  Score=170.20  Aligned_cols=119  Identities=23%  Similarity=0.302  Sum_probs=108.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|++...      ..+.+.+|+.+++.++ |+||+++++.+.++..  +
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~--~  118 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRY--L  118 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCE--E
Confidence            58999999999999999999999999999999999642      1345778999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++  ..+++..++.++.||+.||+|||++||||.+.
T Consensus       119 ~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDL  168 (371)
T cd05622         119 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV  168 (371)
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence            9999999999999998  56899999999999999999999999999854

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.85  E-value=8.6e-21  Score=166.96  Aligned_cols=112  Identities=18%  Similarity=0.262  Sum_probs=101.9

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||++.+..+++.||+|+++..      ....+.+|+++++.++ |+||+++++++.+.+.  +||||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~--~~lv~Ey~   77 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTR-HPFLTSLKYSFQTKDR--LCFVMEYV   77 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCE--EEEEEeCC
Confidence            4699999999999999999999999999743      2456788999999999 9999999999998866  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+|.+++   ..+++.+++.++.||+.||+|||++||||++.
T Consensus        78 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDi  121 (328)
T cd05593          78 NGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDL  121 (328)
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccc
Confidence            999999888   56899999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.85  E-value=8.1e-21  Score=163.17  Aligned_cols=118  Identities=30%  Similarity=0.423  Sum_probs=105.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++|++.+.||+|+||.||+|++..+++.||+|+++..     ..+.+.+|+.+++.++ |+||+++++++.+.+.  +||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~l   77 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLK-QENIVELKEAFRRRGK--LYL   77 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCC-CccccchhhhEecCCE--EEE
Confidence            4699999999999999999999999999999999743     2456789999999999 9999999999988865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||++++++..+.   ..+++..++.++.||+.||.|||++||+|++.
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl  126 (287)
T cd07848          78 VFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDI  126 (287)
T ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            99999988777665   46899999999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.85  E-value=1.2e-20  Score=165.46  Aligned_cols=116  Identities=17%  Similarity=0.249  Sum_probs=102.5

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHH---HhcCCCCcceeeeeEEEcCCCcee
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKIL---QNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il---~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      |++++.||+|+||.||+|.+..+++.||||+++..      ..+.+.+|++++   +.++ |+||+++++++.+.+.  +
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~-hp~i~~~~~~~~~~~~--~   77 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER-HPFLVNLFACFQTEDH--V   77 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccC-CCChhceeeEEEcCCE--E
Confidence            67889999999999999999999999999999743      234567777665   4566 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||++||+|..++  +.+++..+..++.||+.||.|||++||||.+.
T Consensus        78 ~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdl  127 (324)
T cd05589          78 CFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDL  127 (324)
T ss_pred             EEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCC
Confidence            9999999999999888  57999999999999999999999999999854

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.85  E-value=1.4e-20  Score=165.44  Aligned_cols=118  Identities=19%  Similarity=0.379  Sum_probs=104.9

Q ss_pred             CeEEEeEeeecCceEEEEEEEc---CCCcEEEEEEeecc-------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          126 DYEVVRKVGRGKYSEVFEGINV---NTNERCIIKILKPV-------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~-------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      +|++++.||+|+||.||++.+.   .+++.||+|+++..       ..+.+.+|+.+++.+++|+||+++++++.+.+. 
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~-   79 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAK-   79 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCE-
Confidence            5889999999999999998864   47899999999642       134578899999999769999999999988865 


Q ss_pred             eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       +|||||||+||+|.+++   ..+++..++.++.||+.||+|||++||||++.
T Consensus        80 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDl  131 (332)
T cd05614          80 -LHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDI  131 (332)
T ss_pred             -EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCC
Confidence             99999999999999998   56899999999999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.85  E-value=3.7e-21  Score=169.49  Aligned_cols=121  Identities=21%  Similarity=0.313  Sum_probs=102.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+.     .++..||+|+++...    .+.+.+|+.++..+..|+||+++++++...+ 
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-   84 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN-   84 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC-
Confidence            578999999999999999999852     345689999997432    3568899999999933999999999887654 


Q ss_pred             ceeEEEecCCCCCCHHhHcc------------------------------------------------------------
Q 025443          195 KTPSLIFEYVNSTDFKVLYP------------------------------------------------------------  214 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~------------------------------------------------------------  214 (252)
                      ..+++|||||+||+|.+++.                                                            
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence            34899999999999998872                                                            


Q ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          215 -----TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       215 -----~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                           .+++.++..++.||+.||+|||++||||++.
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDi  200 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDL  200 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCC
Confidence                 2677888999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.85  E-value=1.3e-20  Score=165.45  Aligned_cols=118  Identities=19%  Similarity=0.243  Sum_probs=105.1

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      +|+..+.||+|+||.||+|.+..+|+.||+|+++..      ..+.+..|+.++..+..|++|+++++++.+.+.  +||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~--~~l   78 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDR--LYF   78 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCE--EEE
Confidence            478889999999999999999999999999999742      234577899999988756888899999988865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||++||+|.+++   ..+++.++..++.||+.||+|||++||||++.
T Consensus        79 v~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDi  127 (323)
T cd05615          79 VMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDL  127 (323)
T ss_pred             EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            99999999999998   57999999999999999999999999999854

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.85  E-value=2e-21  Score=173.79  Aligned_cols=116  Identities=17%  Similarity=0.267  Sum_probs=103.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      +.+++++.||+|.||.||+|.+. ....||+|.++..  ..+.|.+|+.+|++|+ |+|||+|++++..+++  +|||||
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~p--iyIVtE  281 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMSPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEP--IYIVTE  281 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCc--eEEEEE
Confidence            44566789999999999999993 3347999999863  3577889999999999 9999999999999877  999999


Q ss_pred             CCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          203 YVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       203 ~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ||..|+|.++|     ..+...+...++.|||+||+||+++++||=+
T Consensus       282 ~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRD  328 (468)
T KOG0197|consen  282 YMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRD  328 (468)
T ss_pred             ecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchh
Confidence            99999999999     4589999999999999999999999999953

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.85  E-value=6.4e-21  Score=174.17  Aligned_cols=117  Identities=26%  Similarity=0.405  Sum_probs=107.4

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCC-----CcceeeeeEEEcCCCcee
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGG-----PNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h-----~nIv~l~~~~~~~~~~~~  197 (252)
                      .+|++++.||+|+||.|.+|.+..|++.||||++++..  ..+...|+.+|..|++|     -|||+++++|...++  +
T Consensus       186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H--l  263 (586)
T KOG0667|consen  186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH--L  263 (586)
T ss_pred             EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc--e
Confidence            37899999999999999999999999999999998654  56778999999999843     489999999999987  9


Q ss_pred             EEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          198 SLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||+|+++ .+|+++|     ..|+...++.|+.||+.||.+||+.|||||+
T Consensus       264 ciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcD  314 (586)
T KOG0667|consen  264 CIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCD  314 (586)
T ss_pred             eeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            99999996 7999999     4689999999999999999999999999996

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.85  E-value=1.3e-20  Score=165.84  Aligned_cols=113  Identities=18%  Similarity=0.278  Sum_probs=101.7

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||+|.+..+++.||+|+++..      ..+.+.+|+.++..+.+|+||+++++++.+.+.  +|||||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~--~~lv~e~~   78 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESR--LFFVIEFV   78 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCE--EEEEEeCC
Confidence            3699999999999999999999999999753      234578999999999559999999999998865  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+|.+++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus        79 ~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  122 (329)
T cd05588          79 SGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDL  122 (329)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            999999888   57999999999999999999999999999854

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.1e-20  Score=165.04  Aligned_cols=110  Identities=15%  Similarity=0.258  Sum_probs=100.1

Q ss_pred             eeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          133 VGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       133 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      ||+|+||.||+|.+..+++.||+|+++..      ....+.+|+.++..++ |+||+++++++.+.+.  +||||||++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~lv~e~~~~   77 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN-CPFIVPLKFSFQSPEK--LYLVLAFING   77 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCcEeceeeEEecCCe--EEEEEcCCCC
Confidence            69999999999999999999999999642      2356788999999999 9999999999998865  9999999999


Q ss_pred             CCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          207 TDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       207 g~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+|.+++   +.+++..+..++.||+.||.|||++||+|.+.
T Consensus        78 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDl  119 (312)
T cd05585          78 GELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDL  119 (312)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence            9999998   56999999999999999999999999999854

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=2.4e-21  Score=176.95  Aligned_cols=117  Identities=21%  Similarity=0.313  Sum_probs=108.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .+-|++++.||.|+.|.|.+|.+..||+.+|||++.+.      ....+.+||-||+.|. |||++++|++|+++..  +
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~-HpnVl~LydVwe~~~~--l   87 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE-HPNVLRLYDVWENKQH--L   87 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc-CCCeeeeeeeeccCce--E
Confidence            46799999999999999999999999999999999754      1456889999999999 9999999999999966  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      |+|.||++||.|++++   +.++|.+++++++||+.|+.|||..+|+|=
T Consensus        88 ylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHR  136 (786)
T KOG0588|consen   88 YLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHR  136 (786)
T ss_pred             EEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceec
Confidence            9999999999999999   889999999999999999999999999774

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.85  E-value=2e-20  Score=164.78  Aligned_cols=117  Identities=21%  Similarity=0.309  Sum_probs=105.9

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||++++..+++.+|+|++.+.      ....+.+|+.++..++ |+||+.+++++.+.+.  +|
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~--~~   77 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-NQWITTLHYAFQDENN--LY   77 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCE--EE
Confidence            4799999999999999999999999999999999642      1344788999999998 9999999999998866  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||||++||+|.+++    ..+++..++.++.||+.||+|||++||+|.+
T Consensus        78 lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrD  127 (332)
T cd05623          78 LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRD  127 (332)
T ss_pred             EEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            999999999999999    3589999999999999999999999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=5.9e-21  Score=175.07  Aligned_cols=117  Identities=21%  Similarity=0.334  Sum_probs=108.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..++|.++++||+|+||+|++++.+.+++.+|||++++..      .+..+.|.+|+....+||.+++|+.+|.+.++  
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~--  443 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH--  443 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe--
Confidence            3689999999999999999999999999999999998643      56788999999999889999999999999977  


Q ss_pred             eEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 025443          197 PSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTV  241 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV  241 (252)
                      +|+||||+.|||+..+.  +.|++..++.|+.+|+.||.|||++|||
T Consensus       444 l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~II  490 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGII  490 (694)
T ss_pred             EEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCce
Confidence            99999999999966666  6899999999999999999999999995

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.85  E-value=5.4e-21  Score=173.18  Aligned_cols=115  Identities=10%  Similarity=0.179  Sum_probs=103.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .+...++.+||+|.||+||+|.+..   .||||+++..     ..+.|++|+.++++-+ |.||+-|.|++..+.   +.
T Consensus       391 ~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTR-H~NIlLFMG~~~~p~---~A  463 (678)
T KOG0193|consen  391 PEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTR-HENILLFMGACMNPP---LA  463 (678)
T ss_pred             HHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcc-hhhheeeehhhcCCc---ee
Confidence            4667888999999999999999943   4999999743     4688999999999999 999999999999986   69


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||..+|+|.+|+.+|    .+|...+.+.|++||++||.|||.++|||=+-
T Consensus       464 IiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDL  514 (678)
T KOG0193|consen  464 IITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDL  514 (678)
T ss_pred             eeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhc
Confidence            999999999999999    57899999999999999999999999999653

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.85  E-value=2.7e-20  Score=162.01  Aligned_cols=121  Identities=26%  Similarity=0.472  Sum_probs=107.4

Q ss_pred             cCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       121 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ++..++|.+.+.||+|+||.||+|.+..++..||+|.++...    ...+.+|+.++++++ |+||+++++++.+++.  
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--   78 (309)
T cd07872           2 FGKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLK-HANIVTLHDIVHTDKS--   78 (309)
T ss_pred             CCCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCC-CCCcceEEEEEeeCCe--
Confidence            355788999999999999999999999999999999997432    345778999999999 9999999999998866  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .|+||||++ ++|.+++    ..+++..++.++.||+.||+|||++||||++.
T Consensus        79 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dl  130 (309)
T cd07872          79 LTLVFEYLD-KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDL  130 (309)
T ss_pred             EEEEEeCCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            999999998 5888877    34899999999999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.85  E-value=8.6e-21  Score=172.16  Aligned_cols=118  Identities=19%  Similarity=0.381  Sum_probs=110.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ...|.+.+.||+|.|++|.++.+..++..||||++.+..     .+.+.+|+++|+.|+ |||||+++.+.+....  +|
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~-HPnIvkl~~v~~t~~~--ly  131 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLN-HPNIVKLFSVIETEAT--LY  131 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcC-Ccceeeeeeeeeecce--eE
Confidence            578999999999999999999999999999999997643     355889999999999 9999999999999876  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      +||||+.+|++++++   +++.+..++.++.|+..|++|||+++|||-+
T Consensus       132 lV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrd  180 (596)
T KOG0586|consen  132 LVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRD  180 (596)
T ss_pred             EEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccc
Confidence            999999999999999   7888899999999999999999999999973

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.85  E-value=2.6e-21  Score=172.30  Aligned_cols=119  Identities=20%  Similarity=0.363  Sum_probs=108.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|..++.+|+|+||.+++++++.++..+++|.++...     .+...+|+.++++++ |||||.+++.|..++ ..+|
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~-hP~iv~y~ds~~~~~-~~l~   80 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLL-HPNIVEYKDSFEEDG-QLLC   80 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhcc-CCCeeeeccchhcCC-ceEE
Confidence            578999999999999999999999999999999997532     446789999999999 999999999999886 4599


Q ss_pred             EEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          199 LIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||+||+||||.+.|     ..|+|+.+..|+.|++.||.|||+++|+|=+
T Consensus        81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRD  131 (426)
T KOG0589|consen   81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRD  131 (426)
T ss_pred             EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence            999999999999999     3589999999999999999999999999864

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.84  E-value=2.8e-20  Score=163.45  Aligned_cols=118  Identities=25%  Similarity=0.458  Sum_probs=103.9

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC---cee
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS---KTP  197 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~---~~~  197 (252)
                      +|++.+.||+|+||.||+|.+..++..||||+++..     ...++.+|+.+++.++ |+||+++++++.....   ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~~   79 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFKDI   79 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCC-CCCEeeecceEeccCCCCCceE
Confidence            589999999999999999999999999999998642     2346789999999999 9999999998865432   248


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+|||||+ ++|.+++   ..+++..+..++.||+.||.|||++||||.+.
T Consensus        80 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dl  129 (338)
T cd07859          80 YVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDL  129 (338)
T ss_pred             EEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            99999996 7899888   46999999999999999999999999999865

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.84  E-value=2.8e-20  Score=163.77  Aligned_cols=119  Identities=13%  Similarity=0.176  Sum_probs=108.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++++.||+|+||.||++++..++..+|+|++....    .+.+.+|+++|+.++ |+||+++++++.+++.  ++|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~l   80 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGE--ISI   80 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCE--EEE
Confidence            578999999999999999999999999999999997532    356889999999999 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHC-CCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRW-STVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~-~IV~~~~  245 (252)
                      ||||++||+|.+++   ..+++..+..++.|++.||.|||++ +|||++.
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dl  130 (331)
T cd06649          81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDV  130 (331)
T ss_pred             EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCC
Confidence            99999999999998   5689999999999999999999986 6999854

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.84  E-value=3.3e-20  Score=162.68  Aligned_cols=118  Identities=19%  Similarity=0.221  Sum_probs=105.0

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      +|++.+.||+|+||.||+|++..+++.||+|+++...      .+.+..|..++..+..|++|+++++++.+.+.  +||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~--~~l   78 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDR--LYF   78 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCE--EEE
Confidence            5889999999999999999999999999999997532      34567788888888658999999999998865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||++||+|.+++   ..+++..+..++.||+.||+|||++||||.+.
T Consensus        79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl  127 (323)
T cd05616          79 VMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL  127 (323)
T ss_pred             EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCC
Confidence            99999999999988   57899999999999999999999999999854

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.84  E-value=2.3e-20  Score=157.38  Aligned_cols=117  Identities=25%  Similarity=0.457  Sum_probs=106.2

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccch-----HHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK-----KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-----~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      |++++.||+|+||+||++.+..+++.+|+|++.....     ....+|+.++++++ |+||+++++++.+...  .++||
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~--~~~v~   77 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLR-HPNIVQILDVFQDDNY--LYIVM   77 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHT-BTTBCHEEEEEEESSE--EEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccc-cccccccccccccccc--ccccc
Confidence            7899999999999999999999999999999986542     22345999999998 9999999999999755  99999


Q ss_pred             cCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||+++++|.+++   +.+++..+..++.||++||+|||++||+|++.+
T Consensus        78 ~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dik  125 (260)
T PF00069_consen   78 EYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIK  125 (260)
T ss_dssp             EEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999998   679999999999999999999999999999764

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.84  E-value=2.8e-20  Score=161.48  Aligned_cols=119  Identities=23%  Similarity=0.345  Sum_probs=102.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC----------------CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN----------------TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVV  183 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~----------------~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv  183 (252)
                      .++|++.++||+|+||.||+|.+..                ++..||+|.+....    ...+.+|+++|.+++ |+||+
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv   82 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLK-DPNII   82 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCee
Confidence            5689999999999999999998632                34479999997532    356889999999999 99999


Q ss_pred             eeeeEEEcCCCceeEEEecCCCCCCHHhHcc----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 025443          184 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP----------------------TLTDYDIRYYIYELLKVMSIFIRWSTV  241 (252)
Q Consensus       184 ~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l~----------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV  241 (252)
                      ++++++.+.+.  .||||||+++|+|.+++.                      .+++..+..++.||+.||.|||++|||
T Consensus        83 ~~~~~~~~~~~--~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv  160 (304)
T cd05096          83 RLLGVCVDEDP--LCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV  160 (304)
T ss_pred             EEEEEEecCCc--eEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            99999998866  999999999999999871                      256778899999999999999999999


Q ss_pred             EEee
Q 025443          242 LCYQ  245 (252)
Q Consensus       242 ~~~~  245 (252)
                      |.+.
T Consensus       161 H~dl  164 (304)
T cd05096         161 HRDL  164 (304)
T ss_pred             ccCc
Confidence            9854

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=2.5e-22  Score=167.59  Aligned_cols=121  Identities=17%  Similarity=0.302  Sum_probs=104.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ...+|+++++||.|+||.||++....+|..+|.|.++-.     ..+....|+.+|++|+ |||||++|++....+.+.+
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~-HpNIVqYy~~~f~~~~evl   95 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLN-HPNIVQYYAHSFIEDNEVL   95 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcC-CchHHHHHHHhhhccchhh
Confidence            357899999999999999999999999999999999732     2466889999999999 9999999994443332449


Q ss_pred             EEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHH--CC--CeEEe
Q 025443          198 SLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIR--WS--TVLCY  244 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~--~~--IV~~~  244 (252)
                      +||||||++|||...+       +.++|..++.++.|+|.||..||+  .+  |+|-+
T Consensus        96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRD  153 (375)
T KOG0591|consen   96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRD  153 (375)
T ss_pred             HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeecc
Confidence            9999999999999999       569999999999999999999999  44  55543

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.84  E-value=2.6e-20  Score=163.34  Aligned_cols=113  Identities=17%  Similarity=0.236  Sum_probs=100.9

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||+|++..+++.||||+++..      ..+.+..|+.++..+..|+||+++++++.+.+.  +|||||||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~--~~iv~Ey~   78 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDR--LFFVMEFV   78 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCE--EEEEEcCC
Confidence            3699999999999999999999999999742      245567899999887559999999999998866  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+|.+++   ..+++..+..++.||+.||+|||++||||.+.
T Consensus        79 ~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dl  122 (320)
T cd05590          79 NGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDL  122 (320)
T ss_pred             CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence            999999988   57999999999999999999999999999854

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.84  E-value=2.8e-20  Score=162.82  Aligned_cols=113  Identities=19%  Similarity=0.246  Sum_probs=99.2

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||+|.+..+++.||||+++..      ..+.+..|..++..+.+|+||+++++++...+.  +||||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~--~~lv~e~~   78 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEH--LFFVMEYL   78 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCE--EEEEEcCC
Confidence            3699999999999999999999999999743      234556777888766459999999999998865  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+|.+++   ..+++..+..++.||+.||+|||++||||++.
T Consensus        79 ~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl  122 (316)
T cd05592          79 NGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDL  122 (316)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence            999999988   57999999999999999999999999999854

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.84  E-value=2.8e-20  Score=163.27  Aligned_cols=112  Identities=19%  Similarity=0.255  Sum_probs=100.9

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||++.+..++..||+|+++..      ....+.+|++++..++ |+||+++++++.+.+.  +||||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~-hp~i~~~~~~~~~~~~--~~lv~E~~   77 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDR--LCFVMEYA   77 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCCceEEEEEcCCE--EEEEEeCC
Confidence            3699999999999999999999999999753      2345678999999999 9999999999998865  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      +||+|..++   +.+++..+..++.||+.||+|||+ +||||++.
T Consensus        78 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDi  122 (325)
T cd05594          78 NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDL  122 (325)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Confidence            999999988   568999999999999999999997 89999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.84  E-value=2.6e-20  Score=162.94  Aligned_cols=112  Identities=21%  Similarity=0.354  Sum_probs=99.8

Q ss_pred             eEeeecCceEEEEEEEc---CCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          131 RKVGRGKYSEVFEGINV---NTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      +.||+|+||.||++.+.   .+|+.+|+|+++...     ...+.+|+++|++++ |+||+++++++.+++.  +|||||
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~--~~lv~e   78 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVN-HPFIVKLHYAFQTEGK--LYLILD   78 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCE--EEEEEc
Confidence            57999999999998863   578999999997532     345678999999999 9999999999998865  999999


Q ss_pred             CCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |++||+|.+++   ..+++..++.++.||+.||.|||++||+|.+.
T Consensus        79 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  124 (318)
T cd05582          79 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDL  124 (318)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence            99999999998   46899999999999999999999999999864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=4.2e-21  Score=172.75  Aligned_cols=121  Identities=20%  Similarity=0.306  Sum_probs=110.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ....|....+||+|+.|.||.+....+++.||||++....   .+-+.+|+.+|+..+ |+|||.+++.|...+.  +|+
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~-H~NiVnfl~Sylv~de--LWV  347 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLH-HPNIVNFLDSYLVGDE--LWV  347 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhcc-chHHHHHHHHhcccce--eEE
Confidence            4568899999999999999999999999999999997543   566889999999999 9999999999988865  999


Q ss_pred             EecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          200 IFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||+||+|.+.+  ..++|.++..|+++++.||+|||.+||+|-++.
T Consensus       348 VMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIK  396 (550)
T KOG0578|consen  348 VMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIK  396 (550)
T ss_pred             EEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccc
Confidence            99999999999999  569999999999999999999999999998764

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.84  E-value=5e-20  Score=160.45  Aligned_cols=118  Identities=14%  Similarity=0.198  Sum_probs=106.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+....    ..++.+|++++++++ |+||+++++++.+++.  +|||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~lv   77 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECN-SPYIVGFYGAFYSDGE--ISIC   77 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCE--EEEE
Confidence            46999999999999999999999999999999986432    356789999999998 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          201 FEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      |||++|++|.+++   +.+++..+..++.||+.||.|||+ +||+|++.
T Consensus        78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl  126 (308)
T cd06615          78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDV  126 (308)
T ss_pred             eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCC
Confidence            9999999999998   568999999999999999999998 69999854

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=3.9e-20  Score=162.56  Aligned_cols=118  Identities=19%  Similarity=0.258  Sum_probs=109.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++...||.|.-++||+|+...++..||||+++.++    .+.+.+|+..|+.++ ||||++++..|..+..  +|+
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~-HPNIv~~~~sFvv~~~--LWv  101 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLID-HPNIVTYHCSFVVDSE--LWV  101 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcC-CCCcceEEEEEEecce--eEE
Confidence            578999999999999999999999999999999997543    578999999999999 9999999999999866  999


Q ss_pred             EecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          200 IFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       200 V~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ||.||.+|++.+++     ..++|..++.|++++++||.|||++|-||=+
T Consensus       102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRd  151 (516)
T KOG0582|consen  102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRD  151 (516)
T ss_pred             eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecc
Confidence            99999999999999     5699999999999999999999999988853

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.84  E-value=3.9e-20  Score=162.85  Aligned_cols=113  Identities=19%  Similarity=0.290  Sum_probs=101.0

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||+|.+..+++.||+|+++..      ..+.+.+|+.++..+.+|+||+++++++.+.+.  +||||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~--~~lv~E~~   78 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR--LFFVIEYV   78 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCE--EEEEEeCC
Confidence            3699999999999999999999999999753      134577899999887559999999999998865  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+|..++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus        79 ~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Di  122 (329)
T cd05618          79 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL  122 (329)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence            999999888   57999999999999999999999999999854

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.84  E-value=3e-20  Score=157.67  Aligned_cols=117  Identities=17%  Similarity=0.324  Sum_probs=106.3

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      +|+..+.||+|+||.||++.+..++..+|+|+++...         .+.+.+|++++++++ |+||+++++++.+.+.  
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~--   77 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HPHIIRMLGATCEDSH--   77 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC-CCceehhhceeccCCe--
Confidence            4778899999999999999999999999999996422         356889999999999 9999999999988866  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +++||||+.|++|.+++   +.+++..+..++.||+.||.|||++||+|.+.
T Consensus        78 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i  129 (268)
T cd06630          78 FNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDV  129 (268)
T ss_pred             EEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            99999999999999998   56899999999999999999999999999754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.84  E-value=6.2e-20  Score=158.26  Aligned_cols=118  Identities=20%  Similarity=0.345  Sum_probs=107.8

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||++.+..+++.||+|.+...      ..+.+.+|++++++++ |+||+++++++.+.+.  +|
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~   77 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSN--LY   77 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCe--EE
Confidence            4699999999999999999999999999999999642      2456889999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||+++|+|.+++   ..+++..+..++.||+.||+|||++||+|.+.
T Consensus        78 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl  127 (290)
T cd05580          78 LVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDL  127 (290)
T ss_pred             EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence            999999999999998   56899999999999999999999999999754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.84  E-value=4.8e-20  Score=156.64  Aligned_cols=120  Identities=23%  Similarity=0.368  Sum_probs=108.4

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++...   ....+.+|+.+++.++ |+||+++++++...+.  +|+
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~-h~~ii~~~~~~~~~~~--~~i   83 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECK-HCNIVAYFGSYLSREK--LWI   83 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCE--EEE
Confidence            357899999999999999999999999999999999743   2456789999999999 9999999999988865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+++|+|.+++   ..+++.++..++.|++.||+|||++||+|.+.
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  132 (267)
T cd06646          84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDI  132 (267)
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            99999999999988   56899999999999999999999999999743

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.84  E-value=2.9e-20  Score=159.78  Aligned_cols=110  Identities=15%  Similarity=0.207  Sum_probs=98.7

Q ss_pred             eeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          133 VGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       133 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      ||+|+||+||++.+..+++.||+|.+....      .+.+..|+++++.++ |+||+++++++.+...  +||||||++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~--~~lv~e~~~~   77 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH-SRFIVSLAYAFQTKTD--LCLVMTIMNG   77 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC-CCcEeeeeEEEcCCCe--EEEEEeCCCC
Confidence            699999999999999999999999996432      245678999999999 9999999999998865  9999999999


Q ss_pred             CCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          207 TDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       207 g~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+|.+++       ..+++..+..++.||+.||+|||++||+|++.
T Consensus        78 g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  123 (280)
T cd05608          78 GDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDL  123 (280)
T ss_pred             CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            9998776       35899999999999999999999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.84  E-value=6.9e-20  Score=157.78  Aligned_cols=117  Identities=21%  Similarity=0.248  Sum_probs=104.8

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .|+..+.||+|+||+||++.+..+++.+|+|.+....      ...+.+|+++|+.++ |+||+.+++.+.+++.  +|+
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~--~~l   77 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN-SQFVVNLAYAYETKDA--LCL   77 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC-CcCceeEEEEEecCCE--EEE
Confidence            3778899999999999999999999999999996532      234678999999999 9999999999988865  999


Q ss_pred             EecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+.+|+|.+++     ..+++..+..++.|++.||.|||++||+|.+.
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~di  128 (285)
T cd05632          78 VLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDL  128 (285)
T ss_pred             EEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCC
Confidence            99999999999887     25899999999999999999999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.84  E-value=3.7e-20  Score=162.29  Aligned_cols=113  Identities=20%  Similarity=0.262  Sum_probs=100.6

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||+|.+..+++.||||+++..      ..+.+..|++++..+.+|+||+++++++.+.+.  +||||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~--~~lv~E~~   78 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDR--LFFVMEYV   78 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCe--EEEEEeCC
Confidence            3699999999999999999999999999753      234567899999877559999999999998866  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+|..++   +.+++..+..++.||+.||.|||++||||.+.
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDi  122 (321)
T cd05591          79 NGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDL  122 (321)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            999999888   57899999999999999999999999999854

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.83  E-value=1.7e-20  Score=168.12  Aligned_cols=120  Identities=22%  Similarity=0.317  Sum_probs=103.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEE-----cCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGIN-----VNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+     ..++..||+|+++...    .+.+.+|+.+|..+..|+||+++++++.+.+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            45899999999999999999974     3456789999996432    45688999999999339999999999998876


Q ss_pred             ceeEEEecCCCCCCHHhHcc------------------------------------------------------------
Q 025443          195 KTPSLIFEYVNSTDFKVLYP------------------------------------------------------------  214 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~------------------------------------------------------------  214 (252)
                        .++|||||+||+|.+++.                                                            
T Consensus       114 --~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (375)
T cd05104         114 --TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS  191 (375)
T ss_pred             --ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence              999999999999988871                                                            


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          215 ------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       215 ------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                                        .+++..+..++.||+.||+|||++||||.+.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl  240 (375)
T cd05104         192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDL  240 (375)
T ss_pred             ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence                              2678888999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.83  E-value=5e-20  Score=162.44  Aligned_cols=118  Identities=14%  Similarity=0.208  Sum_probs=107.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++.+.||+|+||.||++.+..++..+|+|++....    ...+.+|+++++.++ |+||+++++++.+++.  +||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~l   80 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGE--ISI   80 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC-CCcccceeEEEEECCE--EEE
Confidence            578999999999999999999999999999999987532    356889999999999 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHC-CCeEEe
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRW-STVLCY  244 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~-~IV~~~  244 (252)
                      ||||+.||+|.+++   +.+++..+..++.|++.||.|||++ +|||.+
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~d  129 (333)
T cd06650          81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD  129 (333)
T ss_pred             EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence            99999999999998   5689999999999999999999985 799974

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.83  E-value=4.3e-20  Score=166.50  Aligned_cols=115  Identities=17%  Similarity=0.204  Sum_probs=104.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      ..+|++++.||+|+||.||+|.+..+++.||+|...   .+.+.+|+++|+.++ |+|||+++++|..+..  .|+|||+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~---~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~--~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ---RGGTATEAHILRAIN-HPSIIQLKGTFTYNKF--TCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh---hhhhHHHHHHHHhCC-CCCCCCEeEEEEECCe--eEEEEec
Confidence            468999999999999999999999999999999764   345789999999999 9999999999998865  9999999


Q ss_pred             CCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +. ++|..++   ..+++.+++.++.||+.||+|||++||||.+.
T Consensus       165 ~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDi  208 (391)
T PHA03212        165 YK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDI  208 (391)
T ss_pred             CC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            96 7888887   56899999999999999999999999999864

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.83  E-value=6.5e-20  Score=155.68  Aligned_cols=119  Identities=18%  Similarity=0.384  Sum_probs=106.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||+|.+..+++.||||.++...      ...+.+|+++++.++ |+||+++++++.+.+.  .+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~   78 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIKYLDSFIEDNE--LN   78 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC-CcceeeeeeeEEECCe--EE
Confidence            57999999999999999999999999999999885421      346789999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||+++|+|.+++       ..+++..+..++.||+.||.|||++||+|.+..
T Consensus        79 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~  133 (267)
T cd08228          79 IVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIK  133 (267)
T ss_pred             EEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCC
Confidence            999999999999887       237899999999999999999999999998543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.83  E-value=5.4e-20  Score=155.51  Aligned_cols=118  Identities=15%  Similarity=0.218  Sum_probs=104.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||++.+. .+..+|+|.++...  ...+.+|+.+++.++ |+||+++++++.+.+.  +++||
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~iv~   78 (256)
T cd05114           3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLS-HPKLVQLYGVCTQQKP--LYIVT   78 (256)
T ss_pred             HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCC-CCCceeEEEEEccCCC--EEEEE
Confidence            356899999999999999999874 45679999986533  467889999999999 9999999999988876  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||++||+|.+++    ..+++..+..++.|++.||+|||++||+|.+.
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  126 (256)
T cd05114          79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDL  126 (256)
T ss_pred             EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            999999999998    34899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.83  E-value=5.3e-20  Score=161.81  Aligned_cols=113  Identities=19%  Similarity=0.300  Sum_probs=101.8

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||+|.+..+++.||+|+++...      .+.+.+|+.++.++..|+||+.+++++.+.+.  +|||||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~--~~lv~e~~   78 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSR--LFLVIEYV   78 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCE--EEEEEeCC
Confidence            36999999999999999999999999997532      34578999999998669999999999998865  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+|..++   +.+++..++.++.||+.||+|||++||+|.+.
T Consensus        79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDl  122 (327)
T cd05617          79 NGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDL  122 (327)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            999999888   57999999999999999999999999999854

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.83  E-value=9.9e-20  Score=156.73  Aligned_cols=121  Identities=25%  Similarity=0.452  Sum_probs=107.2

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      +..++|++.+.||+|+||.||+|.+..+++.||||.+....    ...+.+|+++++.++ |+||+++++++.+++.  .
T Consensus         2 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~--~   78 (291)
T cd07844           2 GKLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLK-HANIVTLHDIIHTKKT--L   78 (291)
T ss_pred             CCccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCC-CcceeeEEEEEecCCe--E
Confidence            44688999999999999999999998899999999986432    245678999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |+||||+. ++|.+++    ..+++..++.++.||+.||.|||++||||.+..
T Consensus        79 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~  130 (291)
T cd07844          79 TLVFEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLK  130 (291)
T ss_pred             EEEEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCC
Confidence            99999998 5999887    357999999999999999999999999998543

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.83  E-value=5.9e-20  Score=175.90  Aligned_cols=119  Identities=19%  Similarity=0.310  Sum_probs=108.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|.+++.||+|+||.||+|.+..+++.||||+++...      ...+.+|+.++..++ |+||+++++++.....  +
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~--~   79 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK-SPFIVHLYYSLQSANN--V   79 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC-CCCcCeEEEEEEECCE--E
Confidence            578999999999999999999999999999999997532      367889999999999 9999999999988865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||+.|++|.+++   +.+++..++.|+.||+.||+|||++||||.+.
T Consensus        80 ~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDL  130 (669)
T cd05610          80 YLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDL  130 (669)
T ss_pred             EEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCc
Confidence            9999999999999998   56899999999999999999999999999854

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.83  E-value=6.4e-21  Score=175.37  Aligned_cols=119  Identities=24%  Similarity=0.415  Sum_probs=107.3

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC----Cce
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH----SKT  196 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~----~~~  196 (252)
                      ..|...+.||+|+||.||+++++.+|+.||||.+++.    ..+...+|+++|++|+ |+|||+++++-++..    .+.
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~~~   91 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVTRL   91 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCccccc
Confidence            4466678999999999999999999999999999763    3567889999999999 999999999888766    556


Q ss_pred             eEEEecCCCCCCHHhHc------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          197 PSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ..+|||||.||||+..|      ..++|.+++.++.++..||.|||++||||=+
T Consensus        92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRD  145 (732)
T KOG4250|consen   92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRD  145 (732)
T ss_pred             ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceecc
Confidence            79999999999999999      3599999999999999999999999999964

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.83  E-value=6.8e-20  Score=155.80  Aligned_cols=117  Identities=21%  Similarity=0.368  Sum_probs=100.3

Q ss_pred             EEEeEeeecCceEEEEEEEc----CCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          128 EVVRKVGRGKYSEVFEGINV----NTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       128 ~~~~~lG~G~fg~V~~~~~~----~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++.+.||.|+||.||+|.+.    ..+..|+||.++..    ..+.+.+|++.+++++ |+||++++|++...+.  +++
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~g~~~~~~~--~~l   78 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLR-HPNIVKLYGFCIENEP--LFL   78 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHS-BTTBE-EEEEEESSSS--EEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccc-cccccccccccccccc--ccc
Confidence            46789999999999999997    34678999999642    2567899999999998 9999999999997765  999


Q ss_pred             EecCCCCCCHHhHc--c---CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeeee
Q 025443          200 IFEYVNSTDFKVLY--P---TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQSF  247 (252)
Q Consensus       200 V~E~~~gg~L~~~l--~---~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~~  247 (252)
                      |||||.+|+|.++|  .   .+++..+..|+.||+.||.|||+++|||++.+.
T Consensus        79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~  131 (259)
T PF07714_consen   79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSP  131 (259)
T ss_dssp             EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SG
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999  2   589999999999999999999999999986653

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.83  E-value=1.1e-19  Score=154.40  Aligned_cols=120  Identities=20%  Similarity=0.279  Sum_probs=106.5

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .+|++.+.||+|+||.||++.+..++..||||.+...        ..+.+.+|+.++++++ |+||+++++++.+.....
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~   80 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL-HERIVQYYGCLRDPMERT   80 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC-CCCeeeEEeEeccCCCce
Confidence            5799999999999999999999999999999998531        1346788999999999 999999999988754455


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +++||||++||+|.+++   ..+++..+..++.|++.||+|||++||+|.+.
T Consensus        81 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl  132 (265)
T cd06652          81 LSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDI  132 (265)
T ss_pred             EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence            89999999999999998   56899999999999999999999999999754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.83  E-value=6.5e-20  Score=160.51  Aligned_cols=113  Identities=15%  Similarity=0.207  Sum_probs=100.3

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||+|.+..+|..||+|+++..      ..+.+..|..++..+.+|+||+++++++.+.+.  +|||||||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~--~~lv~E~~   78 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEH--LFFVMEFL   78 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCE--EEEEECCC
Confidence            4699999999999999999999999999753      234567888888876449999999999998865  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .||+|.+++   ..+++.++..++.||+.||+|||++||||.+.
T Consensus        79 ~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDl  122 (316)
T cd05620          79 NGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDL  122 (316)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            999999988   46899999999999999999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.83  E-value=6e-20  Score=160.79  Aligned_cols=113  Identities=18%  Similarity=0.258  Sum_probs=101.1

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||+||+|.+..++..||||+++..      ....+.+|++++..+..|+||+++++++.+.+.  +|+||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~--~~lv~e~~   78 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDR--LFFVMEYV   78 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCE--EEEEEcCC
Confidence            3699999999999999999999999999753      245577899999988559999999999998865  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+|..++   ..+++..+..++.||+.||.|||++||||.+.
T Consensus        79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dl  122 (318)
T cd05570          79 NGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDL  122 (318)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCC
Confidence            999999888   47999999999999999999999999999853

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=7e-21  Score=163.41  Aligned_cols=131  Identities=25%  Similarity=0.404  Sum_probs=113.6

Q ss_pred             cccccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeeeeEEEc
Q 025443          117 LTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP-----VKKKKIKREIKILQNLCGGPNVVKLLDIVRD  191 (252)
Q Consensus       117 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~  191 (252)
                      ....|.....|..++.||+|+||.|+.+.++.+|..||||.+..     ...++..+|+++|+.++ |+||+.+++.+..
T Consensus        14 ~~~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p   92 (359)
T KOG0660|consen   14 FGELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRP   92 (359)
T ss_pred             eeeEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhc-CCCcceEEeeccc
Confidence            33445556778888999999999999999999999999999962     23678899999999999 9999999999976


Q ss_pred             ---CCCceeEEEecCCCCCCHHhHc--cC-CCHHHHHHHHHHHHHHHHHHHHCCCeEEeeeecc
Q 025443          192 ---QHSKTPSLIFEYVNSTDFKVLY--PT-LTDYDIRYYIYELLKVMSIFIRWSTVLCYQSFLY  249 (252)
Q Consensus       192 ---~~~~~~~lV~E~~~gg~L~~~l--~~-l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~~~~  249 (252)
                         +..+.+|+|+|+|+ .||...+  +. ++++.++.++.||++||+|+|+.||+|.|.-..+
T Consensus        93 ~~~~~f~DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsN  155 (359)
T KOG0660|consen   93 PSRDKFNDVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSN  155 (359)
T ss_pred             ccccccceeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhh
Confidence               33456999999995 8999999  44 9999999999999999999999999999875543

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.83  E-value=3.4e-20  Score=167.62  Aligned_cols=88  Identities=27%  Similarity=0.396  Sum_probs=75.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC-----CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT-----NERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||.||+|.+...     +..||||+++...    .+.+.+|+++|.++..|||||++++++.+.+.
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            57899999999999999999987433     3479999996432    45688999999999669999999999988866


Q ss_pred             ceeEEEecCCCCCCHHhHc
Q 025443          195 KTPSLIFEYVNSTDFKVLY  213 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l  213 (252)
                        +|||||||++|+|.+++
T Consensus       116 --~~lv~Ey~~~g~L~~~l  132 (400)
T cd05105         116 --IYIITEYCFYGDLVNYL  132 (400)
T ss_pred             --eEEEEEecCCCcHHHHH
Confidence              99999999999998876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.83  E-value=9.9e-20  Score=157.80  Aligned_cols=120  Identities=24%  Similarity=0.463  Sum_probs=107.2

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      +..++|++.+.||+|+||.||+|.+..++..||+|.++...    ...+.+|+.+++.++ |+||+++++++.+.+.  +
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~--~   79 (301)
T cd07873           3 GKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKS--L   79 (301)
T ss_pred             ccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcC-CCCcceEEEEEecCCe--E
Confidence            44688999999999999999999999999999999996432    346778999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++||||++ ++|.+++    ..+++..++.++.||+.||+|||++||+|++.
T Consensus        80 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dl  130 (301)
T cd07873          80 TLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDL  130 (301)
T ss_pred             EEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence            99999997 6888887    35889999999999999999999999999854

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.83  E-value=1e-19  Score=156.81  Aligned_cols=117  Identities=18%  Similarity=0.186  Sum_probs=104.8

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .|+..+.||+|+||.||++.+..+++.+|+|.+....      ...+.+|+.+++.++ |++|+.+++.+.+.+.  +|+
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~--~~l   77 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN-SRFVVSLAYAYETKDA--LCL   77 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC-CCCeeeeeEEEecCCE--EEE
Confidence            3778899999999999999999999999999986432      245678999999999 9999999999988865  999


Q ss_pred             EecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+.||+|.+++     ..+++..+..++.|++.||.|||++||+|.+.
T Consensus        78 v~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~di  128 (285)
T cd05630          78 VLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDL  128 (285)
T ss_pred             EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCC
Confidence            99999999999888     35899999999999999999999999999854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.83  E-value=8.3e-20  Score=159.92  Aligned_cols=113  Identities=19%  Similarity=0.214  Sum_probs=99.8

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||+||+|.+..+++.||||+++..      ..+....|..++..+.+|+||+++++++.+.+.  +||||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~--~~lv~ey~   78 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKEN--LFFVMEYL   78 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCE--EEEEEeCC
Confidence            4699999999999999999999999999753      234566788888875349999999999998865  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+|.+++   ..+++.++..++.||+.||+|||++||||.+.
T Consensus        79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdi  122 (316)
T cd05619          79 NGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDL  122 (316)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence            999999998   46899999999999999999999999999854

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.83  E-value=6.9e-20  Score=160.67  Aligned_cols=112  Identities=17%  Similarity=0.306  Sum_probs=97.4

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHH-HHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIK-ILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~-il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      +.||+|+||+||+|.+..+|+.||||++....      .+.+..|.. +++.++ |+||+++++++.+.+.  +||||||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~-hp~iv~~~~~~~~~~~--~~lv~e~   77 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTADK--LYFVLDY   77 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCC-CCCCCCeeEEEEeCCE--EEEEEcC
Confidence            46999999999999999999999999997432      234455555 457788 9999999999988865  9999999


Q ss_pred             CCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++||+|..++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus        78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~di  122 (323)
T cd05575          78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDL  122 (323)
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence            9999999988   56899999999999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.83  E-value=1.2e-19  Score=161.37  Aligned_cols=122  Identities=17%  Similarity=0.269  Sum_probs=105.4

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC--
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS--  194 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~--  194 (252)
                      ...++|++.+.||+|+||.||++.+..+|..||+|++...     ....+.+|+.+++.++ |+||+++++++.....  
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~   96 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN-HKNIISLLNVFTPQKSLE   96 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCCcc
Confidence            3468999999999999999999999999999999999642     2456789999999999 9999999999875432  


Q ss_pred             --ceeEEEecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 --KTPSLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 --~~~~lV~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        ..+|+||||+++ +|.+.+ ..+++..+..++.||+.||.|||++||||.+.
T Consensus        97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDl  149 (359)
T cd07876          97 EFQDVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDL  149 (359)
T ss_pred             ccceeEEEEeCCCc-CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence              247999999985 566665 67899999999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.83  E-value=6e-20  Score=161.13  Aligned_cols=112  Identities=21%  Similarity=0.326  Sum_probs=99.4

Q ss_pred             eEeeecCceEEEEEEEc---CCCcEEEEEEeeccc-------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          131 RKVGRGKYSEVFEGINV---NTNERCIIKILKPVK-------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~~-------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +.||+|+||.||++.+.   .+++.||+|+++...       ...+.+|+.+|+.++ |+||+++++++.+++.  +|+|
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~--~~lv   78 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HPFIVDLIYAFQTGGK--LYLI   78 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC-CCchhceeeEEecCCe--EEEE
Confidence            67999999999999874   468899999997421       345678999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+.||+|.+++   +.+.+..++.++.||+.||+|||++||+|.+.
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  126 (323)
T cd05584          79 LEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDL  126 (323)
T ss_pred             EeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            9999999999998   56889999999999999999999999999854

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.83  E-value=1e-19  Score=156.10  Aligned_cols=122  Identities=20%  Similarity=0.270  Sum_probs=105.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEE----cCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGIN----VNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~----~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..+|++.+.||+|+||.||++..    ..++..||+|.+....   .+.+.+|+++++.++ |+||+++++++...+...
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~   81 (284)
T cd05081           3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRRN   81 (284)
T ss_pred             cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC-CCCeeEEEEEEccCCCCc
Confidence            35799999999999999999974    4578899999986543   457889999999999 999999999886554345


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +++||||+++|+|.+++    ..+++..+..++.|++.||+|||++||+|.+..
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlk  135 (284)
T cd05081          82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLA  135 (284)
T ss_pred             eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Confidence            89999999999999998    348999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.83  E-value=7.7e-20  Score=160.51  Aligned_cols=112  Identities=17%  Similarity=0.293  Sum_probs=97.5

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHH-HHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIK-ILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~-il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      +.||+|+||+||+|.+..+|+.+|+|++...      ....+..|.. +++.++ |+||+++++++...+.  +||||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-hp~iv~~~~~~~~~~~--~~lv~e~   77 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTTEK--LYFVLDF   77 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCC-CCCCccEEEEEecCCE--EEEEEcC
Confidence            4699999999999999999999999999643      1234556655 466788 9999999999998865  9999999


Q ss_pred             CCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +.||+|..++   ..+++..++.++.||+.||+|||++||+|++.
T Consensus        78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dl  122 (325)
T cd05604          78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDL  122 (325)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence            9999999888   56899999999999999999999999999854

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=3.8e-20  Score=158.47  Aligned_cols=119  Identities=19%  Similarity=0.327  Sum_probs=108.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++.+.||+|+||.||++.+..++..+|+|.+....   .+.+.+|++++++++ |+||+++++.+.++..  +|+|
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv   80 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK-HPNIVGLYEAYFYENK--LWIL   80 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCe--EEEE
Confidence            567999999999999999999998899999999997543   456889999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+++|+|.+++    ..+++..++.++.|++.||.|||++||+|.+.
T Consensus        81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl  129 (280)
T cd06611          81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDL  129 (280)
T ss_pred             eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            9999999999998    35899999999999999999999999999743

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.83  E-value=9.3e-20  Score=159.63  Aligned_cols=112  Identities=17%  Similarity=0.290  Sum_probs=97.4

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHH-HHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIK-ILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~-il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      +.||+|+||.||+|++..+++.||+|++....      ...+.+|.. +++.++ |+||+++++++.+.+.  +||||||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~iv~~~~~~~~~~~--~~lv~e~   77 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLK-HPFLVGLHYSFQTAEK--LYFVLDY   77 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCE--EEEEEcC
Confidence            36999999999999999999999999996432      234555554 577888 9999999999988865  9999999


Q ss_pred             CCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+||+|..++   ..+++..++.++.||+.||+|||++||||.+.
T Consensus        78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dl  122 (321)
T cd05603          78 VNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDL  122 (321)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence            9999999888   56899999999999999999999999999854

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.83  E-value=3.4e-20  Score=165.92  Aligned_cols=111  Identities=19%  Similarity=0.374  Sum_probs=102.1

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      .+.||+|.||+||-|.++++|+.||||+|.+.     ....+++|+.||.++. ||.||.|.-.|++.+.  +++|||-+
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~-HPGiV~le~M~ET~er--vFVVMEKl  645 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH-HPGIVNLECMFETPER--VFVVMEKL  645 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC-CCCeeEEEEeecCCce--EEEEehhh
Confidence            47899999999999999999999999999753     3577899999999999 9999999999999977  99999999


Q ss_pred             CCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          205 NSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       205 ~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      . ||+.+.|     +++++...+.++.||+.||.|||-+|||||+
T Consensus       646 ~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCD  689 (888)
T KOG4236|consen  646 H-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCD  689 (888)
T ss_pred             c-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeecc
Confidence            7 6776666     7899999999999999999999999999996

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.83  E-value=7e-20  Score=165.43  Aligned_cols=119  Identities=24%  Similarity=0.320  Sum_probs=104.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ..+...+.++||+|-||.|.+|+- ..+..||+|.++...    ...|.+||++|.+|+ |||||+|+|+|..++.  +|
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DeP--ic  611 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDP--LC  611 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCc--hH
Confidence            357788899999999999999987 446899999998654    467999999999998 9999999999999988  99


Q ss_pred             EEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||++|||.+++     ..........|+.||+.||+||.+.++||-+.
T Consensus       612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~  663 (807)
T KOG1094|consen  612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDL  663 (807)
T ss_pred             HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccc
Confidence            999999999999999     12344555679999999999999999999754

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.83  E-value=2e-19  Score=154.86  Aligned_cols=120  Identities=18%  Similarity=0.212  Sum_probs=106.9

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ++|+..+.||.|++|.||+|.+..+++.+|+|.+...    ...++.+|+++++.++ |+||+++++++.+...+.+|+|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~lv   79 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCK-SPYIVKYYGAFLDESSSSIGIA   79 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCC-CCCeeeeeeEEEccCCCeEEEE
Confidence            4689999999999999999999999999999999753    2456889999999999 9999999999876554569999


Q ss_pred             ecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++|++|.+++       ..+++..+..++.||+.||.|||+.||+|...
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl  131 (287)
T cd06621          80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDI  131 (287)
T ss_pred             EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            9999999998876       34889999999999999999999999999854

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.83  E-value=5.6e-20  Score=161.41  Aligned_cols=114  Identities=15%  Similarity=0.178  Sum_probs=101.8

Q ss_pred             EEeEeeec--CceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          129 VVRKVGRG--KYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       129 ~~~~lG~G--~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      +++.||+|  +||+||++.+..+|+.||+|+++...     .+.+.+|+.+++.++ |+||+++++++.+++.  .|+||
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~--~~lv~   78 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNE--LWVVT   78 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEECCE--EEEEE
Confidence            45789999  78999999999999999999997532     356778999999999 9999999999998865  99999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+++|+|.+++     ..+++..++.++.||+.||+|||++||||.+.
T Consensus        79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dl  127 (327)
T cd08227          79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSV  127 (327)
T ss_pred             eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence            999999999998     34899999999999999999999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.82  E-value=1e-19  Score=157.01  Aligned_cols=121  Identities=17%  Similarity=0.276  Sum_probs=109.1

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ...+.|++++.||.|+||.||+|.+..++..+|+|.+....   .+.+.+|+.+++.++ |+||+++++.+..++.  +|
T Consensus         9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~   85 (292)
T cd06644           9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCN-HPYIVKLLGAFYWDGK--LW   85 (292)
T ss_pred             CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCC-CCcEeeeEEEEEeCCe--EE
Confidence            44578999999999999999999999999999999997543   456788999999999 9999999999988865  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||++|++|..++    ..+++..+..++.|++.||.|||++||+|.+.
T Consensus        86 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dl  136 (292)
T cd06644          86 IMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDL  136 (292)
T ss_pred             EEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCC
Confidence            999999999998876    45899999999999999999999999999854

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.82  E-value=2e-19  Score=151.83  Aligned_cols=117  Identities=15%  Similarity=0.257  Sum_probs=105.7

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      +|++.+.||+|+||.||++.+..++..+|+|.++..    ..+.+.+|+.+++.++ |+||+++++.+.+++.  +|+||
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~   77 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMK-HPNIVAFKESFEADGH--LYIVM   77 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCE--EEEEE
Confidence            588999999999999999999999999999998642    2456789999999999 9999999999998865  99999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+++|+|.+++     ..+++..+..++.||+.||.|||++||+|.+.
T Consensus        78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl  126 (255)
T cd08219          78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDI  126 (255)
T ss_pred             eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Confidence            999999999987     34789999999999999999999999999853

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.82  E-value=2e-19  Score=174.97  Aligned_cols=121  Identities=19%  Similarity=0.317  Sum_probs=108.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+..++..||+|++...     ....+..|+.+|..|+ |+|||+++++|.+.....+|
T Consensus        12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de~~~~ly   90 (1021)
T PTZ00266         12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELK-HKNIVRYIDRFLNKANQKLY   90 (1021)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEecCCCEEE
Confidence            67999999999999999999999999999999998643     2456889999999999 99999999998766545699


Q ss_pred             EEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHC-------CCeEEee
Q 025443          199 LIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRW-------STVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~-------~IV~~~~  245 (252)
                      ||||||++|+|.++|       ..+++..++.|+.||+.||.|||+.       +|||.+.
T Consensus        91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDL  151 (1021)
T PTZ00266         91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDL  151 (1021)
T ss_pred             EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccC
Confidence            999999999999988       3589999999999999999999995       4999854

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.82  E-value=2.1e-20  Score=160.37  Aligned_cols=119  Identities=25%  Similarity=0.421  Sum_probs=104.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccch-----HHHHHHHHHHHhcCCCCc-ceeeeeEEEcCCC---
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK-----KKIKREIKILQNLCGGPN-VVKLLDIVRDQHS---  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-----~~~~~Ei~il~~l~~h~n-Iv~l~~~~~~~~~---  194 (252)
                      ...|..+++||+|+||+||+|+.+.+|+.||+|.++.+..     ....+|+.+|+.|+ |+| ||+|++++.+.+.   
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~~   88 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLS-HANHIVRLHDVIHTSNNHRG   88 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhC-CCcceEEEEeeeeecccccc
Confidence            4557778899999999999999999999999999986432     35689999999999 999 9999999988761   


Q ss_pred             -ceeEEEecCCCCCCHHhHc---c----CCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          195 -KTPSLIFEYVNSTDFKVLY---P----TLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       195 -~~~~lV~E~~~gg~L~~~l---~----~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                       ..++|||||++ .||.+++   .    .++...++.+++||+.||+|||++||||-+
T Consensus        89 ~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRD  145 (323)
T KOG0594|consen   89 IGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRD  145 (323)
T ss_pred             cceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence             24999999998 7999999   2    367789999999999999999999999964

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.82  E-value=1.2e-19  Score=159.35  Aligned_cols=112  Identities=17%  Similarity=0.288  Sum_probs=96.8

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHH-HHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIK-ILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~-il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      +.||+|+||.||+|++..+++.||+|++....      ...+..|.. +++.++ |+||+++++++.+.+.  +|+||||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~Iv~~~~~~~~~~~--~~lv~e~   77 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADK--LYFVLDY   77 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCC-CCCCCceeEEEEcCCe--EEEEEeC
Confidence            36999999999999999999999999997432      233444544 467788 9999999999998866  9999999


Q ss_pred             CCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++||+|.+++   ..+.+..++.++.||+.||+|||++||+|++.
T Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDl  122 (325)
T cd05602          78 INGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL  122 (325)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            9999999998   56889999999999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.82  E-value=1.4e-19  Score=154.01  Aligned_cols=119  Identities=17%  Similarity=0.224  Sum_probs=104.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC---cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN---ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..+|++.+.||+|+||.||+|.+..++   ..+|+|.++...    .+.+.+|+.+++.++ |+||+++++++.+++.  
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--   79 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSKP--   79 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCc--
Confidence            467999999999999999999986544   379999986432    456889999999999 9999999999988866  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|+||||++||+|.+++    ..+++.++..++.|++.||.|||++||+|++.
T Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dl  132 (267)
T cd05066          80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL  132 (267)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhh
Confidence            99999999999999998    35899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.82  E-value=1.9e-19  Score=154.13  Aligned_cols=117  Identities=28%  Similarity=0.445  Sum_probs=105.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++...     ..+.+.+|+.+++.++ |+||+++++++.+...  +++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~--~~~   77 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLK-HPNLVNLIEVFRRKRK--LHL   77 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCC-CCCEeeeeeEEeeCCE--EEE
Confidence            4799999999999999999999989999999998642     2355789999999999 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ||||+++++|..++   ..+++..++.++.||+.||+|||++||+|.+
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~d  125 (286)
T cd07847          78 VFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRD  125 (286)
T ss_pred             EEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            99999999988887   4689999999999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.82  E-value=1.1e-19  Score=153.19  Aligned_cols=112  Identities=22%  Similarity=0.363  Sum_probs=101.0

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      +.||+|+||.||+|.+..+++.+|+|.+...    ....+.+|+++++.++ |+||+++++++.+...  .||||||+++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~e~~~~   77 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQP--IYIVMELVQG   77 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEcCCCC--eEEEEeeccC
Confidence            3689999999999999999999999988643    2456889999999999 9999999999998866  9999999999


Q ss_pred             CCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          207 TDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       207 g~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++|.+++    ..+++.++..++.|++.||.|||++||+|.+.
T Consensus        78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl  120 (252)
T cd05084          78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDL  120 (252)
T ss_pred             CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence            9999998    25899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.82  E-value=2.3e-19  Score=152.01  Aligned_cols=118  Identities=18%  Similarity=0.349  Sum_probs=106.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.++..      ..+.+.+|++++++++ |+||+++++++.+.+.  .+
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~-~~~i~~~~~~~~~~~~--~~   78 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD-HPNVIKYLASFIENNE--LN   78 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCeeeeeeeeecCCe--EE
Confidence            5799999999999999999999989999999998632      2457889999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||++||+|..++       ..+++..+..++.|++.||.|||+.||+|.+.
T Consensus        79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl  132 (267)
T cd08224          79 IVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDI  132 (267)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCc
Confidence            999999999999887       23789999999999999999999999999854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.7e-19  Score=152.69  Aligned_cols=118  Identities=20%  Similarity=0.284  Sum_probs=106.9

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+....        .+.+.+|++++++++ |+||+++++++.+.+.  
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--   78 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HERIVQYYGCLRDDET--   78 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEccCCe--
Confidence            46889999999999999999999999999999986421        346789999999999 9999999999998865  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +++||||++|++|.+++   +.+++..+..++.|++.||.|||+.||+|.+.
T Consensus        79 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl  130 (263)
T cd06625          79 LSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDI  130 (263)
T ss_pred             EEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            99999999999999998   56899999999999999999999999999854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.82  E-value=1.7e-19  Score=153.26  Aligned_cols=119  Identities=18%  Similarity=0.214  Sum_probs=105.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC---CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT---NERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++.+.||+|+||.||+|.+..+   ...||||.++...    ...+.+|+.+++.++ |+||+++++++.+.+.  
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--   79 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD-HPNIIRLEGVVTKSRP--   79 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCC-CCCcceEeEEEecCCc--
Confidence            46799999999999999999998644   4579999986532    356788999999999 9999999999988866  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .++||||+++|+|.+++    +.+++..+..++.|++.||+|||++||+|++.
T Consensus        80 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di  132 (266)
T cd05033          80 VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDL  132 (266)
T ss_pred             eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            99999999999999998    36899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.82  E-value=7.3e-20  Score=164.02  Aligned_cols=120  Identities=21%  Similarity=0.280  Sum_probs=103.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC-----CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT-----NERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|++..+     +..||+|+++...    .+.+.+|+.+++.+.+|+|||++++++.+.+.
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~  116 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP  116 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence            46899999999999999999986443     3579999997532    34678999999999339999999999998876


Q ss_pred             ceeEEEecCCCCCCHHhHcc------------------------------------------------------------
Q 025443          195 KTPSLIFEYVNSTDFKVLYP------------------------------------------------------------  214 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~------------------------------------------------------------  214 (252)
                        +|||||||++|+|.+++.                                                            
T Consensus       117 --~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (374)
T cd05106         117 --VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS  194 (374)
T ss_pred             --eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence              999999999999998871                                                            


Q ss_pred             -------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          215 -------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       215 -------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                                   .+++..+..|+.||+.||+|||++||+|.+.
T Consensus       195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDL  238 (374)
T cd05106         195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDV  238 (374)
T ss_pred             ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccC
Confidence                         2677889999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.82  E-value=9.7e-20  Score=154.00  Aligned_cols=117  Identities=17%  Similarity=0.322  Sum_probs=106.9

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      +|++.+.||.|+||.||+|.+..++..||+|++...      ..+.+.+|+.++++++ |+||+++++++.++..  .|+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~l   77 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HPFLVNLWYSFQDEEN--MYL   77 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC-CCChHHHHHhhcCCCe--EEE
Confidence            589999999999999999999989999999999642      2467889999999999 9999999999988765  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+.|++|.+++   ..+++..+..++.||++||.|||++||+|.+.
T Consensus        78 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  126 (258)
T cd05578          78 VVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDI  126 (258)
T ss_pred             EEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            99999999999998   37999999999999999999999999999854

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.82  E-value=6.4e-20  Score=155.86  Aligned_cols=119  Identities=22%  Similarity=0.371  Sum_probs=107.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||+|.++...   ...+.+|+.+++.++ |+||+++++.+...+.  +|+|
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~-h~~ii~~~~~~~~~~~--~~lv   84 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCK-HSNIVAYFGSYLRRDK--LWIC   84 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCE--EEEE
Confidence            467889999999999999999999999999999997543   345788999999999 9999999999988865  9999


Q ss_pred             ecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+++++|.+++   +.+++.+++.++.|++.||.|||++||+|.+.
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  132 (267)
T cd06645          85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDI  132 (267)
T ss_pred             EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            9999999999998   57899999999999999999999999999743

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.82  E-value=1.8e-19  Score=154.56  Aligned_cols=111  Identities=20%  Similarity=0.184  Sum_probs=98.4

Q ss_pred             eeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          133 VGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       133 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      ||+|+||.||++.+..+|+.+|+|.+....      .+.+..|+++++.++ |+||+++++++.++..  +|+||||++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~i~~~~~~~~~~~~--~~lv~e~~~g   77 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN-SPFIVNLAYAFESKTH--LCLVMSLMNG   77 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC-CCcEEEEEEEEecCCe--EEEEEecCCC
Confidence            699999999999999999999999996422      334567999999998 9999999999998866  9999999999


Q ss_pred             CCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          207 TDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       207 g~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |+|.+++     ..+++..+..++.||+.||+|||++||||.+..
T Consensus        78 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dik  122 (277)
T cd05607          78 GDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMK  122 (277)
T ss_pred             CCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCC
Confidence            9999887     248899999999999999999999999998543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.82  E-value=1.6e-19  Score=157.69  Aligned_cols=118  Identities=18%  Similarity=0.279  Sum_probs=103.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcE----EEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNER----CIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~----vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      ..+|+..+.||+|+||.||+|.+..++..    ||+|.++...    .+.+.+|+.+++.++ |+||+++++++....  
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~g~~~~~~--   82 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST--   82 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEcCCC--
Confidence            56799999999999999999998666553    8999986432    457889999999999 999999999998753  


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       .++|+||+.+|+|.+++    ..+++..+..++.||+.||+|||++||||++.
T Consensus        83 -~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dl  135 (316)
T cd05108          83 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDL  135 (316)
T ss_pred             -ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeecccc
Confidence             78999999999999998    35889999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PTZ00284 protein kinase; Provisional

Probab=99.82  E-value=1.3e-18  Score=160.24  Aligned_cols=120  Identities=13%  Similarity=0.248  Sum_probs=101.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcC-----CCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLC-----GGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~-----~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++++.||+|+||+||+|.+..+++.||||+++..  ..+.+..|+.+++.++     .+.+|+.++++|.... ..
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~-~~  206 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET-GH  206 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC-ce
Confidence            57899999999999999999999999999999999642  2345677888888876     1345889999988654 45


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      +|||||++ |++|.+++   +.+++..++.|+.||+.||+|||+ .||||++.
T Consensus       207 ~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDl  258 (467)
T PTZ00284        207 MCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDL  258 (467)
T ss_pred             EEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCC
Confidence            89999998 67888887   579999999999999999999998 59999863

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.82  E-value=9.5e-20  Score=171.08  Aligned_cols=117  Identities=18%  Similarity=0.315  Sum_probs=101.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec---cchHHHHHHHHHHHhcCCCCcceeeeeE-EEc---CC-Cc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP---VKKKKIKREIKILQNLCGGPNVVKLLDI-VRD---QH-SK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~---~~~~~~~~Ei~il~~l~~h~nIv~l~~~-~~~---~~-~~  195 (252)
                      ..++++.+.|.+|||+.||+|++...|..||+|++-.   ...+.+++||++|+.|.||+|||.|+|. ...   ++ ..
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            4568889999999999999999988889999999853   3356789999999999999999999993 322   11 24


Q ss_pred             eeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          196 TPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      +++|.||||.||.|-+++     .+|+|.++++|+.|+|+||.+||.+.-
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~p  165 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKP  165 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999     469999999999999999999999983

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.82  E-value=2.9e-19  Score=153.08  Aligned_cols=116  Identities=26%  Similarity=0.379  Sum_probs=105.9

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|++.+.||+|+||.||+|.+..+|..||+|++....     .+.+.+|+.+++.++ |+||+++++++.++..  +++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~--~~~v   77 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSG--FVLV   77 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCe--eEEE
Confidence            5899999999999999999999899999999997432     457889999999999 9999999999998765  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+ +++|.+++    ..+++.+++.++.||+.||+|||++||+|++.
T Consensus        78 ~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  125 (286)
T cd07832          78 MEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDL  125 (286)
T ss_pred             eccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCc
Confidence            9999 99999988    45899999999999999999999999999864

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.82  E-value=2.1e-19  Score=152.25  Aligned_cols=118  Identities=14%  Similarity=0.185  Sum_probs=104.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||++.+. .+..+|+|.++...  .+.+.+|+.+++.++ |+||+++++++.+...  +++||
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~   78 (256)
T cd05113           3 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLS-HEKLVQLYGVCTKQRP--IYIVT   78 (256)
T ss_pred             hHHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcccHHHHHHHHHHHhcCC-CCCeeeEEEEEccCCC--cEEEE
Confidence            457999999999999999999874 34569999987533  467899999999999 9999999999988866  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+.+|+|.+++    ..+++..+..++.||+.||.|||+.||+|.+.
T Consensus        79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  126 (256)
T cd05113          79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDL  126 (256)
T ss_pred             EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence            999999999998    35899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.82  E-value=3.4e-19  Score=150.37  Aligned_cols=116  Identities=16%  Similarity=0.273  Sum_probs=105.7

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|++++.||.|+||.||.+.+..++..+++|.+...     ..+.+.+|++++++++ |+||+++++++.+.+.  ++++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~--~~~~   77 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQ-HPNIIAYYNHFMDDNT--LLIE   77 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCC-CCCeeEEEeEEecCCe--EEEE
Confidence            589999999999999999999999999999998643     2456889999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          201 FEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       201 ~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ||||++|+|.+++     ..+++.++..++.|++.||.|||++||+|++
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d  126 (256)
T cd08221          78 MEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRD  126 (256)
T ss_pred             EEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence            9999999999998     2489999999999999999999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.82  E-value=3.3e-19  Score=154.92  Aligned_cols=118  Identities=20%  Similarity=0.292  Sum_probs=106.9

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||++.+..+++.||+|.++...      .+.+.+|+++++.++ |+||+++++.+..++.  ++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~--~~   77 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE-NPFVVSMFCSFETKRH--LC   77 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEecCCE--EE
Confidence            36899999999999999999999999999999997532      346779999999999 9999999999988865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||++||+|.+++   +.+++..+..++.|++.||.|||++||+|.+.
T Consensus        78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  127 (305)
T cd05609          78 MVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDL  127 (305)
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            999999999999999   56899999999999999999999999999853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.82  E-value=4.1e-19  Score=153.86  Aligned_cols=119  Identities=18%  Similarity=0.286  Sum_probs=108.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ..+|++.+.||+|+||.||++.+..++..+|+|.+....   .+.+.+|+.+++.++ |+||+++++.+.....  .|+|
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~-h~~v~~~~~~~~~~~~--~~lv   95 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGDE--LWVV   95 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCC-CCCEeeEEEEEEeCCE--EEEe
Confidence            578999999999999999999999999999999997533   456889999999998 9999999999988755  9999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++|++|.+++  ..+++.++..++.|++.||.|||++||+|.+.
T Consensus        96 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dL  142 (296)
T cd06654          96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDI  142 (296)
T ss_pred             ecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            9999999999998  56899999999999999999999999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=1.9e-20  Score=167.23  Aligned_cols=117  Identities=21%  Similarity=0.340  Sum_probs=108.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .+=|.+.+.||+|.|+.|-+|++..+|..||||++.+.+     ...+.+|++.|+.++ |||||+||++..++..  +|
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQ-HpNiVRLYEViDTQTK--ly   93 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQ-HPNIVRLYEVIDTQTK--LY   93 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhc-CcCeeeeeehhcccce--EE
Confidence            345888899999999999999999999999999998765     345789999999999 9999999999999876  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      ||+|+-++|||++||    ..++|+.+++|+.||+.|+.|||+..|||-
T Consensus        94 LiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHR  142 (864)
T KOG4717|consen   94 LILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHR  142 (864)
T ss_pred             EEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcc
Confidence            999999999999999    579999999999999999999999999986

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.82  E-value=2.5e-19  Score=151.68  Aligned_cols=119  Identities=18%  Similarity=0.302  Sum_probs=106.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|+++++||+|+||.||+|.+ .++..||+|.+....  .+.+.+|+.+++.++ |+||+++++.+.+.+.  .++||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~   80 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEP--IYIIT   80 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCchhHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCC--cEEEE
Confidence            57899999999999999999987 456779999987533  567889999999999 9999999999988866  99999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||+.||+|.+++     ..+++..+..++.|++.||+|||++||+|++..
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~  130 (261)
T cd05072          81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLR  130 (261)
T ss_pred             ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence            999999999998     357889999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.82  E-value=6.1e-20  Score=162.14  Aligned_cols=125  Identities=21%  Similarity=0.401  Sum_probs=108.2

Q ss_pred             ccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          120 QWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       120 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .|...++|++++.||+|+||.||+|.+..++..||||++...     ..+.+.+|+.+|+.++ |+||+++++++.....
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~   88 (343)
T cd07878          10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMK-HENVIGLLDVFTPATS   88 (343)
T ss_pred             HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcC-CCchhhhhhhhccccc
Confidence            445578999999999999999999999999999999999643     2355778999999999 9999999998864321


Q ss_pred             ----ceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 ----KTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ----~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                          ..+|++||++ |++|.+++  ..+++..+..++.||+.||+|||++||||.+..
T Consensus        89 ~~~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdik  145 (343)
T cd07878          89 IENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLK  145 (343)
T ss_pred             ccccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence                2479999998 68999888  579999999999999999999999999998653

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.82  E-value=2e-19  Score=155.36  Aligned_cols=117  Identities=29%  Similarity=0.426  Sum_probs=105.0

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      +|++.+.||+|+||.||+|.+..+++.||||.++...        ...+..|+++++.++ |+||+++++++.+.+.  +
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~--~   77 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSN--I   77 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCE--E
Confidence            5888999999999999999999899999999997532        235678999999999 9999999999998755  9


Q ss_pred             EEEecCCCCCCHHhHc---c-CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---P-TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~-~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ++||||+ +|+|.+++   . .+++..+..++.||++||.|||++||+|.+..
T Consensus        78 ~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~  129 (298)
T cd07841          78 NLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLK  129 (298)
T ss_pred             EEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence            9999999 89999999   2 58999999999999999999999999998554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.82  E-value=3.8e-19  Score=152.40  Aligned_cols=117  Identities=26%  Similarity=0.429  Sum_probs=104.4

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|++.+.||+|+||.||+|.+..++..||+|.++..     ..+.+.+|+.+++.++ |+||+++++++.+++.  +|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~~v   77 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQ-HPNIVCLQDVLMQESR--LYLI   77 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcC-CCCEeeeEEEEeeCCe--EEEE
Confidence            588999999999999999999999999999998642     2356889999999999 9999999999998765  9999


Q ss_pred             ecCCCCCCHHhHc------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||++ ++|.+++      ..+++..++.++.||+.||+|||++||+|.+..
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~  128 (285)
T cd07861          78 FEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLK  128 (285)
T ss_pred             EecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence            99997 6888887      358999999999999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.82  E-value=3e-19  Score=164.95  Aligned_cols=118  Identities=16%  Similarity=0.224  Sum_probs=104.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCC-CcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNT-NERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~-~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ..|.+.+.||+|+||.||+|.+..+ +..||+|.+....   ...+.+|+.+|+.++ |+|||++++++..++.  +|||
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~~--~~lv  143 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACD-HFGIVKHFDDFKSDDK--LLLI  143 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEEECCE--EEEE
Confidence            3499999999999999999998877 7889999875433   345778999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++||+|.+++       ..+++..+..++.||+.||+|||++||||.+.
T Consensus       144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDl  195 (478)
T PTZ00267        144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDL  195 (478)
T ss_pred             EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCc
Confidence            9999999999877       24899999999999999999999999999854

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.82  E-value=2.4e-19  Score=152.22  Aligned_cols=120  Identities=18%  Similarity=0.302  Sum_probs=108.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      ..+|.+.+.||+|+||.||+|.+..+++.||+|+++...  ...+.+|+++++.++ |+||+++++++...+.  +++||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~   81 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPP--FYIIT   81 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCC-CCChhheEEEEcCCCC--cEEEE
Confidence            456999999999999999999999999999999987543  457889999999999 9999999999988876  99999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||+++|+|.+++     ..+++..+..++.|++.||+|||++||+|.+..
T Consensus        82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlk  131 (263)
T cd05052          82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA  131 (263)
T ss_pred             EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccC
Confidence            999999999998     248899999999999999999999999998543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.82  E-value=3.2e-19  Score=152.98  Aligned_cols=117  Identities=14%  Similarity=0.199  Sum_probs=104.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ++|++.+.||+|+||.||+|.+..++..||+|.+....    .+.+.+|++++++++ |+||+++++.+...+.  .++|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~lv   77 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCD-SPYIIGFYGAFFVENR--ISIC   77 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEECCE--EEEE
Confidence            36788899999999999999999999999999986432    356889999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+++|+|..+ ..+++..+..++.|++.||+|||++||+|.+.
T Consensus        78 ~e~~~~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  121 (279)
T cd06619          78 TEFMDGGSLDVY-RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDV  121 (279)
T ss_pred             EecCCCCChHHh-hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCC
Confidence            999999999755 56899999999999999999999999999853

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=4e-19  Score=150.94  Aligned_cols=119  Identities=23%  Similarity=0.313  Sum_probs=106.1

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .+|++.+.||+|+||.||++.+..++..||+|.+...        ....+.+|+++++.++ |+||+++++++.+...+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~   80 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR-HDRIVQYYGCLRDPEEKK   80 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC-CCCcceEEEEEEcCCCCE
Confidence            4699999999999999999999999999999997531        1346889999999999 999999999998765455


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      +++||||++|++|.+++   ..+++..+..++.||+.||.|||++||+|++
T Consensus        81 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~d  131 (264)
T cd06653          81 LSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRD  131 (264)
T ss_pred             EEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            89999999999999988   4589999999999999999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.81  E-value=3e-19  Score=152.06  Aligned_cols=119  Identities=17%  Similarity=0.210  Sum_probs=105.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc---EEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE---RCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..+|++.+.||+|+||.||+|.+..++.   .||+|.+....    .+.+..|+.+++.++ |+||+++++++.+++.  
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~--   79 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSRP--   79 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC-CcCcceEEEEECCCCc--
Confidence            3568999999999999999999877664   59999986532    457889999999999 9999999999988866  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .++||||+++|+|.+++    +.+++.++..++.|++.||+|||++|++|.+.
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl  132 (269)
T cd05065          80 VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDL  132 (269)
T ss_pred             eEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccc
Confidence            99999999999999998    35899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.81  E-value=2e-19  Score=159.65  Aligned_cols=122  Identities=17%  Similarity=0.275  Sum_probs=105.2

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC--
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS--  194 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~--  194 (252)
                      ...++|++.+.||+|+||.||++.+..+++.||+|++...     ..+.+.+|+.+++.++ |+||+++++++.....  
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~   92 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKSLE   92 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhC-CCchhceeeeeecccccc
Confidence            4568999999999999999999999999999999999642     2456778999999999 9999999999865431  


Q ss_pred             --ceeEEEecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 --KTPSLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 --~~~~lV~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        ..+|+||||+++ +|.+.+ ..+++..+..++.|++.||.|||++||||++.
T Consensus        93 ~~~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDi  145 (355)
T cd07874          93 EFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDL  145 (355)
T ss_pred             ccceeEEEhhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence              247999999975 666666 67899999999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.81  E-value=8.6e-20  Score=161.51  Aligned_cols=121  Identities=22%  Similarity=0.302  Sum_probs=102.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEE-----cCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGIN-----VNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+     ..+++.||||+++...    .+.+.+|+.++.++..|+||+++++++...+ 
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-   84 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-   84 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC-
Confidence            57899999999999999999985     3467889999997532    3467899999999954899999999887654 


Q ss_pred             ceeEEEecCCCCCCHHhHcc------------------------------------------------------------
Q 025443          195 KTPSLIFEYVNSTDFKVLYP------------------------------------------------------------  214 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~------------------------------------------------------------  214 (252)
                      ..+++|||||++|+|.+++.                                                            
T Consensus        85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (343)
T cd05103          85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  164 (343)
T ss_pred             CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence            34899999999999998871                                                            


Q ss_pred             ----------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          215 ----------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       215 ----------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                                .+++.++..++.||+.||+|||++||+|.+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~di  205 (343)
T cd05103         165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDL  205 (343)
T ss_pred             hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence                      2567788899999999999999999999854

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.81  E-value=4.5e-19  Score=162.21  Aligned_cols=120  Identities=19%  Similarity=0.306  Sum_probs=101.4

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCC------Cce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQH------SKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~------~~~  196 (252)
                      ...+|++++.||+|+||.||+|.+..+++.||||++.... ....+|+.+|+.++ |+|||++++++....      ...
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-~~~~~Ei~il~~l~-h~niv~l~~~~~~~~~~~~~~~~~  141 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-QYKNRELLIMKNLN-HINIIFLKDYYYTECFKKNEKNIF  141 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-chHHHHHHHHHhcC-CCCCcceeeeEeecccccCCCceE
Confidence            4578999999999999999999999999999999986432 33468999999999 999999999875421      124


Q ss_pred             eEEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +++||||++ ++|.+++       ..+++..++.++.||+.||.|||++||||.+.
T Consensus       142 l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDL  196 (440)
T PTZ00036        142 LNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDL  196 (440)
T ss_pred             EEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCc
Confidence            779999998 5676665       46899999999999999999999999999854

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.81  E-value=4.5e-22  Score=163.30  Aligned_cols=119  Identities=23%  Similarity=0.330  Sum_probs=108.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP-----VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..+.|++.+.||+|.|+.|++|.+..+|+.+|+|+++.     ...+++.+|++|.+.|+ |||||+|.+.+.+.+.  .
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~--~   85 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESF--H   85 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcC-CCcEeehhhhhcccce--e
Confidence            45789999999999999999999999999999999964     34678999999999999 9999999999988866  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||+|+|+||+|..-|   ..++|..+..+++||+++|.|+|.+||||-+
T Consensus        86 ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRD  135 (355)
T KOG0033|consen   86 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRD  135 (355)
T ss_pred             EEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc
Confidence            9999999999998887   4589999999999999999999999999963

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.81  E-value=1.5e-19  Score=161.66  Aligned_cols=118  Identities=21%  Similarity=0.347  Sum_probs=103.6

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC---cee
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS---KTP  197 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~---~~~  197 (252)
                      +|++++.||+|+||.||++.+..+++.||||.+...     ..+++.+|+++++.++ |+||+++++++...+.   ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~   79 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFK-HDNVLSALDILQPPHIDPFEEI   79 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCC-CCCcCCHhheecCCCccccceE
Confidence            477889999999999999999999999999998642     2456889999999999 9999999999987651   148


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+||||+. ++|.+++   ..+++..++.++.||+.||+|||++||||++.
T Consensus        80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dl  129 (372)
T cd07853          80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDI  129 (372)
T ss_pred             EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence            99999997 6888877   56899999999999999999999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.81  E-value=4.6e-19  Score=150.77  Aligned_cols=120  Identities=23%  Similarity=0.289  Sum_probs=106.1

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .+|+..+.||+|+||.||++.+..++..||+|.+...        ..+.+.+|+.+++.++ |+||+++++++.+.....
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~   80 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HERIVQYYGCLRDRAEKT   80 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC-CCCeeeEEEEEEcCCCCE
Confidence            3688899999999999999999999999999998632        1346789999999999 999999999988654455


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++++|||+++++|.+++   ..+++.....++.|++.||+|||++||+|.+.
T Consensus        81 ~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l  132 (266)
T cd06651          81 LTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDI  132 (266)
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence            89999999999999998   46899999999999999999999999999854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=5.8e-19  Score=156.64  Aligned_cols=121  Identities=21%  Similarity=0.315  Sum_probs=105.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCC-------CCcceeeeeEEEcCC-
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCG-------GPNVVKLLDIVRDQH-  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~-------h~nIv~l~~~~~~~~-  193 (252)
                      ..+|.+.++||.|.|++||+|.+..+.+.||+|+.+...  .+....||++|++++.       ..+||+|++.|.-.+ 
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            389999999999999999999999999999999998543  6778899999999874       247999999998433 


Q ss_pred             -CceeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          194 -SKTPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       194 -~~~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                       ..++|||+|++ |-+|..+|     +.++...++.|++||+.||.|||. .||+|.+.
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDl  214 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDL  214 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCC
Confidence             34799999999 57787787     679999999999999999999996 69999753

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.81  E-value=1.8e-19  Score=153.74  Aligned_cols=120  Identities=22%  Similarity=0.353  Sum_probs=105.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-----CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-----TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|+.++.||+|+||.||+|..+.     +...+++|.+....    .+.+.+|++++++++ |+||+++++++.+.+.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~   82 (275)
T cd05046           4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLS-HKNVVRLLGLCREAEP   82 (275)
T ss_pred             hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcC-CcceeeeEEEECCCCc
Confidence            4679999999999999999999754     34679999986433    357899999999999 9999999999988766


Q ss_pred             ceeEEEecCCCCCCHHhHc---c---------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---P---------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~---------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        .|+||||+++|+|.+++   .         .+++..+..++.||+.||+|||++||+|++..
T Consensus        83 --~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlk  144 (275)
T cd05046          83 --HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLA  144 (275)
T ss_pred             --ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCc
Confidence              99999999999999998   2         58999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=6.6e-19  Score=148.82  Aligned_cols=119  Identities=24%  Similarity=0.442  Sum_probs=108.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++.+.||+|+||.||+|.+..++..+|+|++...   ..+.+.+|+.+++.++ |+||+++++++.+.+.  +|++
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~--~~l~   78 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECR-HPNIVAYFGSYLRRDK--LWIV   78 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCC-CCChhceEEEEEeCCE--EEEE
Confidence            46899999999999999999999999999999999754   3567899999999999 9999999999988865  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+++++|.+++    ..+++.++..++.|++.||.|||++||+|.+.
T Consensus        79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl  127 (262)
T cd06613          79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDI  127 (262)
T ss_pred             EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Confidence            9999999999988    46899999999999999999999999999854

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.81  E-value=3.5e-19  Score=152.84  Aligned_cols=120  Identities=23%  Similarity=0.271  Sum_probs=103.9

Q ss_pred             CCe-EEEeEeeecCceEEEEEEE----cCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          125 DDY-EVVRKVGRGKYSEVFEGIN----VNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       125 ~~y-~~~~~lG~G~fg~V~~~~~----~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      ++| ++++.||+|+||+||++..    ..++..||+|.++..    ....+.+|+++|+.++ |+||+++++++......
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~   81 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLY-HENIVKYKGCCSEQGGK   81 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCCc
Confidence            445 8899999999999988653    356889999999753    2456789999999999 99999999998765545


Q ss_pred             eeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .+++||||+++|+|.+++  ..+++.++..++.|++.||+|||++||+|.+.
T Consensus        82 ~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dl  133 (283)
T cd05080          82 GLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDL  133 (283)
T ss_pred             eEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence            589999999999999998  57999999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.81  E-value=5e-19  Score=149.07  Aligned_cols=117  Identities=18%  Similarity=0.259  Sum_probs=105.9

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|+..+.||+|+||.||++.+..++..+|+|.+...     ..+.+.+|+.+++.++ |+||+++++.+...+.  .++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~--~~lv   77 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLS-HPNIIEYYENFLEDKA--LMIV   77 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCC-CCchhheeeeEecCCE--EEEE
Confidence            589999999999999999999999999999998643     2457889999999999 9999999999987755  9999


Q ss_pred             ecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++|++|.+++     ..+++..+..++.|++.||+|||++||+|.+.
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  127 (256)
T cd08220          78 MEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDL  127 (256)
T ss_pred             EecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            9999999999998     23899999999999999999999999999843

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.81  E-value=1.8e-19  Score=154.41  Aligned_cols=118  Identities=26%  Similarity=0.419  Sum_probs=105.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....     .+.+.+|+++++.++ |+||+++++++.+++.  .|+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~l   77 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLR-HENLVNLIEVFRRKKR--LYL   77 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcC-CcchhhHHHhcccCCe--EEE
Confidence            46999999999999999999998899999999985422     346789999999999 9999999999988765  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+++++|..+.   ..+++..+..++.||+.||.|||++||+|.+.
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l  126 (286)
T cd07846          78 VFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDI  126 (286)
T ss_pred             EEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            99999999998877   36899999999999999999999999999843

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=2.7e-19  Score=157.30  Aligned_cols=111  Identities=17%  Similarity=0.276  Sum_probs=96.7

Q ss_pred             eeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcC--CCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          133 VGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLC--GGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       133 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~--~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      ||+|+||+||+|++..+++.||||++....      ......|..++..+.  +|+||+.+++++.+...  +||||||+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~--~~lv~e~~   78 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSD--LYLVTDYM   78 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCe--EEEEEcCC
Confidence            799999999999999999999999996422      233456777776653  49999999999998866  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+|.+++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus        79 ~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDl  122 (330)
T cd05586          79 SGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDL  122 (330)
T ss_pred             CCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence            999999888   56999999999999999999999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.81  E-value=5.4e-19  Score=153.15  Aligned_cols=118  Identities=19%  Similarity=0.299  Sum_probs=108.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ..+|++++.||+|+||.||++.+..+++.||+|.+....   .+.+.+|+.+++.++ |+||+++++++..++.  .|+|
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~--~~lv   94 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGDE--LWVV   94 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCE--EEEe
Confidence            478999999999999999999999999999999996432   456789999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||++|++|.+++  ..+++.++..++.|++.||.|||+.||+|.+
T Consensus        95 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~d  140 (297)
T cd06656          95 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRD  140 (297)
T ss_pred             ecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            9999999999998  5689999999999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.81  E-value=3.2e-19  Score=150.25  Aligned_cols=118  Identities=22%  Similarity=0.367  Sum_probs=105.7

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      +|+..+.||+|+||.||+|.+..++..|++|.+...        ..+.+.+|+.+++.++ |+||+++++++.+...  +
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~--~   77 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPNIVQYLGTEREEDN--L   77 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC-CCCchheeeeEecCCe--E
Confidence            467778999999999999999889999999998642        2356889999999999 9999999999988865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |+||||++|++|.+++   ..+++..+..++.||+.||.|||++||+|++..
T Consensus        78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  129 (258)
T cd06632          78 YIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIK  129 (258)
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            9999999999999998   458999999999999999999999999998543

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.81  E-value=5.5e-19  Score=149.10  Aligned_cols=117  Identities=14%  Similarity=0.275  Sum_probs=105.6

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|++.+.||+|+||.||++.+..+|+.||+|.+...     ..+.+.+|+.+++.++ |+||+++++++.+.+.  .|+|
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~lv   77 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMK-HPNIVQYQESFEENGN--LYIV   77 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCC-CCCeeeeEeeecCCCe--EEEE
Confidence            589999999999999999999999999999998642     2457889999999999 9999999999988865  9999


Q ss_pred             ecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+.+++|.+++     ..+++.++..++.|++.||.|||++||+|.+.
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l  127 (256)
T cd08218          78 MDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDI  127 (256)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence            9999999999988     24789999999999999999999999999743

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.81  E-value=4.2e-19  Score=171.91  Aligned_cols=118  Identities=19%  Similarity=0.279  Sum_probs=104.9

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||+|.+..+++.||+|+++...      .+++.+|+++++.++ ||||+++++++.+++.  .|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~-HPNIVkl~~v~~d~~~--ly   78 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI-HPGIVPVYSICSDGDP--VY   78 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC-CcCcCeEEEEEeeCCE--EE
Confidence            68999999999999999999999999999999996421      456889999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHcc--------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLYP--------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l~--------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||++||+|.+++.              .++...+..++.||+.||+|||++||||.+.
T Consensus        79 LVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDL  139 (932)
T PRK13184         79 YTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDL  139 (932)
T ss_pred             EEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            9999999999999871              2345677899999999999999999999854

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.81  E-value=4.4e-19  Score=149.42  Aligned_cols=118  Identities=15%  Similarity=0.328  Sum_probs=106.4

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|.+.+.||+|+||.||+|.+..++..|++|.+...     ..+.+.+|+++++.++ |+||+++++++.+.+.  .|+|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv   77 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLD-SSYIIRYYESFLDKGK--LNIV   77 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcC-CCCeehheeeeccCCE--EEEE
Confidence            488899999999999999999999999999998642     2567889999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||++|++|.+++     ..+++..+..++.|++.||.|||++||+|.+..
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~  128 (256)
T cd08529          78 MEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIK  128 (256)
T ss_pred             EEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            9999999999998     358899999999999999999999999998543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=5.7e-19  Score=149.92  Aligned_cols=123  Identities=20%  Similarity=0.324  Sum_probs=108.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCC----Cce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQH----SKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~----~~~  196 (252)
                      ..++|++.+.||+|+||.||+|.+..++..+++|++....  .+.+.+|+.+++++.+|+||+++++++.+..    ...
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   83 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ   83 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence            3688999999999999999999998899999999997543  4678899999999955999999999997643    245


Q ss_pred             eEEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||||+++++|.+++       ..+++..+..++.|++.||+|||++||+|++.
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l  139 (275)
T cd06608          84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDI  139 (275)
T ss_pred             EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence            89999999999999887       25899999999999999999999999999854

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.81  E-value=4.6e-19  Score=152.08  Aligned_cols=123  Identities=25%  Similarity=0.421  Sum_probs=106.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcC---CCcee
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQ---HSKTP  197 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~---~~~~~  197 (252)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|+++...  ...+.+|+.+++.+.+|+||+++++++...   ....+
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~   95 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQL   95 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeE
Confidence            3678999999999999999999999999999999986532  456789999999994499999999988532   22358


Q ss_pred             EEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++||||++||+|.+++       ..+++..+..++.|++.||.|||+++|+|.+.
T Consensus        96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  150 (286)
T cd06638          96 WLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDV  150 (286)
T ss_pred             EEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCC
Confidence            9999999999999876       35889999999999999999999999999853

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.81  E-value=3.7e-19  Score=154.62  Aligned_cols=121  Identities=17%  Similarity=0.265  Sum_probs=104.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcE--EEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNER--CIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~--vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..++..  +|+|.++..    ..+.+.+|++++.++.+|+||+++++++.+.+.  +
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~--~   83 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY--L   83 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCC--c
Confidence            56899999999999999999999877754  577777542    234678899999999449999999999988866  9


Q ss_pred             EEEecCCCCCCHHhHcc-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLYP-------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l~-------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |+||||+++|+|.+++.                   .+++.++..++.||+.||+|||++||+|++..
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlk  151 (303)
T cd05088          84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLA  151 (303)
T ss_pred             eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccc
Confidence            99999999999999881                   36889999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.81  E-value=6e-19  Score=149.51  Aligned_cols=119  Identities=18%  Similarity=0.261  Sum_probs=106.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||+|.+. ++..||+|.++...  .+.+.+|+.++++++ |+||+++++++...+.  +|+||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~   80 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEP--IYIVT   80 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCC-CCCccceeEEEecCCC--eeeee
Confidence            567999999999999999999974 45789999997543  467889999999999 9999999999988866  99999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||+.|++|.+++     ..+++..+..++.|++.||.|||++||+|++..
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  130 (261)
T cd05068          81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLA  130 (261)
T ss_pred             ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence            999999999998     258999999999999999999999999998543

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.81  E-value=4.7e-19  Score=157.87  Aligned_cols=123  Identities=15%  Similarity=0.256  Sum_probs=105.8

Q ss_pred             cCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC--
Q 025443          121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH--  193 (252)
Q Consensus       121 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~--  193 (252)
                      +...++|++.+.||+|+||.||++.+..+++.||||++...     ..+.+.+|+.+++.++ |+||+++++++....  
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~~~~~   98 (364)
T cd07875          20 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSL   98 (364)
T ss_pred             hchhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcC-CCCccccceeecccccc
Confidence            34568999999999999999999999999999999999642     2456789999999999 999999999886432  


Q ss_pred             --CceeEEEecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          194 --SKTPSLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       194 --~~~~~lV~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        ...+|+||||++ ++|.+++ ..+++..+..++.|++.||+|||++||||++.
T Consensus        99 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dl  152 (364)
T cd07875          99 EEFQDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDL  152 (364)
T ss_pred             cccCeEEEEEeCCC-CCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCC
Confidence              124799999997 5677776 67899999999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.81  E-value=1.7e-19  Score=153.10  Aligned_cols=119  Identities=17%  Similarity=0.337  Sum_probs=106.3

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||++.+..++..+|||.+...      ....+.+|+.+++.++ |+||+++++++.+++.  .+
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~--~~   78 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNE--LN   78 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc-CCchhhhhheeEeCCe--EE
Confidence            4688889999999999999999999999999988642      2356789999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ++|||++|++|.+++       ..+++..+..++.||+.||.|||++||+|++..
T Consensus        79 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~  133 (267)
T cd08229          79 IVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIK  133 (267)
T ss_pred             EEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            999999999999987       247999999999999999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.81  E-value=8.1e-19  Score=151.14  Aligned_cols=120  Identities=24%  Similarity=0.451  Sum_probs=105.0

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      +..++|++.+.||+|+||.||+|.+..++..||+|++....    ...+.+|+.+++.++ |+||+++++++.+++.  .
T Consensus         2 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~--~   78 (291)
T cd07870           2 GAATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLK-HANIVLLHDIIHTKET--L   78 (291)
T ss_pred             CccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcC-CCCEeEEEEEEecCCe--E
Confidence            34678999999999999999999999999999999986432    235778999999999 9999999999988765  9


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+||||+. ++|.+++    ..+.+..++.++.||+.||.|||++||+|++.
T Consensus        79 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl  129 (291)
T cd07870          79 TFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDL  129 (291)
T ss_pred             EEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            99999996 6776666    35788999999999999999999999999854

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.81  E-value=3.4e-21  Score=162.34  Aligned_cols=116  Identities=20%  Similarity=0.307  Sum_probs=106.1

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec-cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP-VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      +-|.++.+||+|+||.||++.++.+|..+|||.+.- .+.+++..||.||.++. .+++|+|||.|.....  +||||||
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~-S~yVVKYYGSYFK~sD--LWIVMEY  109 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCK-SKYVVKYYGSYFKHSD--LWIVMEY  109 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcC-CchhhhhhhhhccCCc--eEeehhh
Confidence            457788999999999999999999999999999975 45889999999999999 9999999998887765  9999999


Q ss_pred             CCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          204 VNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       204 ~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      |..|+..+++    +.++|+++..+++..++||+|||...-+|-
T Consensus       110 CGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHR  153 (502)
T KOG0574|consen  110 CGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHR  153 (502)
T ss_pred             cCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence            9999999998    679999999999999999999998765554

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.81  E-value=2.6e-20  Score=157.96  Aligned_cols=112  Identities=14%  Similarity=0.290  Sum_probs=104.7

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      .+.||+|+|+.|-.|....+|..+|||+|.++.   ..++.+|++++..+++|+||++|++||+++..  +|||||-|.|
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~--FYLVfEKm~G  160 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR--FYLVFEKMRG  160 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce--EEEEEecccC
Confidence            367999999999999999999999999998653   67889999999999999999999999999977  9999999999


Q ss_pred             CCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          207 TDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       207 g~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      |.|...|   ..|+|.++..+.++|+.||+|||.+||-|-
T Consensus       161 GplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHR  200 (463)
T KOG0607|consen  161 GPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHR  200 (463)
T ss_pred             chHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccc
Confidence            9999999   569999999999999999999999999874

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=5.9e-19  Score=157.10  Aligned_cols=115  Identities=15%  Similarity=0.172  Sum_probs=102.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      ..+|++++.||+|+||.||+|.+..++..||+|+....   ....|+.++++++ |+||+++++++.+...  .|+||||
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~lv~e~  138 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---TTLIEAMLLQNVN-HPSVIRMKDTLVSGAI--TCMVLPH  138 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---ccHHHHHHHHhCC-CCCCcChhheEEeCCe--eEEEEEc
Confidence            45799999999999999999999999999999986432   3457999999999 9999999999998865  9999999


Q ss_pred             CCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +. |+|.+++    ..+++..+..|+.||+.||.|||++||||.+.
T Consensus       139 ~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  183 (357)
T PHA03209        139 YS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDV  183 (357)
T ss_pred             cC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            96 6888887    46899999999999999999999999999864

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.81  E-value=5e-20  Score=172.59  Aligned_cols=118  Identities=21%  Similarity=0.368  Sum_probs=105.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      ..+.+..+.||+|+||+||+|+..     .....||||.++...    .++|++|+++|..|+ |+|||+|+|++.+++.
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~-H~nIVrLlGVC~~~~P  563 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQ-HPNIVRLLGVCREGDP  563 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhcc-CCCeEEEEEEEccCCe
Confidence            567788899999999999999853     235679999997543    568999999999999 9999999999999988


Q ss_pred             ceeEEEecCCCCCCHHhHc-------------cC----CCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          195 KTPSLIFEYVNSTDFKVLY-------------PT----LTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l-------------~~----l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                        +|||+|||..|||.++|             ..    ++..+...|+.||+.||+||-++.+||=+
T Consensus       564 --~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRD  628 (774)
T KOG1026|consen  564 --LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRD  628 (774)
T ss_pred             --eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccc
Confidence              99999999999999999             23    88999999999999999999999999953

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.81  E-value=3.8e-19  Score=152.75  Aligned_cols=120  Identities=26%  Similarity=0.292  Sum_probs=104.8

Q ss_pred             CCeEEEeEeeecCceEEEEEEE----cCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          125 DDYEVVRKVGRGKYSEVFEGIN----VNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~----~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..|++++.||+|+||.||+|..    ..++..||+|.++...    .+.+.+|+.+++.++ |+||+++++++.+.+...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCC-CCCeeeeeeEEecCCCCc
Confidence            4578899999999999999984    4568899999997432    456889999999999 999999999998764345


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .++||||++|++|.+++    ..+++.++..++.||+.||+|||++||+|.+.
T Consensus        83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dl  135 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDL  135 (284)
T ss_pred             eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccc
Confidence            89999999999999998    34899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.81  E-value=1.7e-19  Score=154.56  Aligned_cols=111  Identities=12%  Similarity=0.140  Sum_probs=95.7

Q ss_pred             EeeecCceEEEEEEEcCC------------------------CcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCccee
Q 025443          132 KVGRGKYSEVFEGINVNT------------------------NERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVK  184 (252)
Q Consensus       132 ~lG~G~fg~V~~~~~~~~------------------------~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~  184 (252)
                      .||+|+||.||+|....+                        ...||+|+++...   ...+.+|+.+++.++ |+||++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~-h~niv~   80 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVS-HIHLAF   80 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCC-CCCeee
Confidence            599999999999975322                        2458999986533   346788999999999 999999


Q ss_pred             eeeEEEcCCCceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          185 LLDIVRDQHSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       185 l~~~~~~~~~~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +++++.+...  .+|||||+++|+|..++    +.+++.++..++.||+.||+|||++||+|.+.
T Consensus        81 ~~~~~~~~~~--~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dl  143 (274)
T cd05076          81 VHGVCVRGSE--NIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNV  143 (274)
T ss_pred             EEEEEEeCCc--eEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCC
Confidence            9999998866  99999999999999988    45899999999999999999999999999843

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.81  E-value=5e-19  Score=150.22  Aligned_cols=118  Identities=19%  Similarity=0.323  Sum_probs=105.2

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCC
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------------KKKIKREIKILQNLCGGPNVVKLLDIVRDQH  193 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~  193 (252)
                      +|.+...||+|+||.||+|.+..++..+|+|.+....            .+.+.+|+.+++.++ |+||+++++++.+.+
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~   79 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ-HENIVQYLGSSLDAD   79 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCC
Confidence            4677789999999999999998899999999885321            245789999999999 999999999999886


Q ss_pred             CceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          194 SKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       194 ~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .  .++||||+++++|.+++   +.+++..+..++.|++.||+|||++||||.+..
T Consensus        80 ~--~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~  133 (267)
T cd06628          80 H--LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIK  133 (267)
T ss_pred             c--cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCC
Confidence            6  99999999999999999   568999999999999999999999999998543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.81  E-value=4.3e-19  Score=151.92  Aligned_cols=116  Identities=24%  Similarity=0.343  Sum_probs=105.3

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      -|+..+.||+|+||.||+|.+..++..+|+|.+....    .+.+.+|+.++++++ |+||+++++++.++..  .|+||
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~--~~lv~   81 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTK--LWIIM   81 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcC-CCCEeEEEEEEEeCCe--EEEEE
Confidence            4778889999999999999998899999999986432    356889999999999 9999999999998866  99999


Q ss_pred             cCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          202 EYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       202 E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ||+++|+|.+++  ..+++..+..++.|++.||.|||+.||+|.+
T Consensus        82 e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d  126 (277)
T cd06641          82 EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRD  126 (277)
T ss_pred             EeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCC
Confidence            999999999998  5689999999999999999999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.81  E-value=7.6e-19  Score=152.27  Aligned_cols=119  Identities=23%  Similarity=0.332  Sum_probs=108.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ..+|++.+.||.|+||.||++.+..+++.||+|.+...   ..+.+.+|+.+++.++ |+||+++++++.....  +|+|
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~--~~lv   94 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELK-NPNIVNFLDSFLVGDE--LFVV   94 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcC-CCceeeeeeeEecCce--EEEE
Confidence            46799999999999999999999999999999998643   2457889999999999 9999999999988765  9999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++|++|..++  ..+++.++..++.|++.||+|||++||+|.+.
T Consensus        95 ~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL  141 (296)
T cd06655          95 MEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDI  141 (296)
T ss_pred             EEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            9999999999998  56899999999999999999999999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.81  E-value=3.9e-19  Score=151.06  Aligned_cols=117  Identities=21%  Similarity=0.274  Sum_probs=102.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.++||+|+||.||+|.+..+ ..||+|+++...  .+.+.+|+.+++.++ |+||+++++.+.+. .  .|+||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~-~--~~lv~   79 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLYAVVSEE-P--IYIVT   79 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCC-CCCcceEEEEECCC-C--cEEEE
Confidence            56799999999999999999988655 469999997533  467889999999999 99999999987543 3  79999


Q ss_pred             cCCCCCCHHhHcc-----CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLYP-----TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l~-----~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+++|+|.+++.     .+++..+..++.|++.||+|||+.||+|++.
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl  128 (262)
T cd05071          80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL  128 (262)
T ss_pred             EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            9999999999982     4789999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.81  E-value=7.5e-19  Score=163.00  Aligned_cols=122  Identities=16%  Similarity=0.188  Sum_probs=106.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC---
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS---  194 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~---  194 (252)
                      ..++|.+.+.||+|+||+||+|.+..+|+.||||+++...     ...+.+|+.++..++ |+||+++++.+...+.   
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~-h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCD-FFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCC-CCcEEEeecceecccccCc
Confidence            3579999999999999999999999999999999996432     356789999999999 9999999988764331   


Q ss_pred             ---ceeEEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 ---KTPSLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ---~~~~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                         ..+++||||+++|+|.+++       ..+++..+..++.|++.||.|||++||||++.
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDL  169 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDI  169 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence               1378999999999999988       35899999999999999999999999999864

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.81  E-value=4.7e-19  Score=152.02  Aligned_cols=119  Identities=19%  Similarity=0.312  Sum_probs=104.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc----CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV----NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~----~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++.+.||+|+||.||+|.+.    .++..+|+|.++...    ...+.+|+.+++.++ |+||+++++++..... 
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~-   81 (283)
T cd05090           4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELH-HPNIVCLLGVVTQEQP-   81 (283)
T ss_pred             hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEecCCc-
Confidence            467999999999999999999853    456789999997422    356889999999999 9999999999988876 


Q ss_pred             eeEEEecCCCCCCHHhHcc--------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLYP--------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l~--------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       .|+||||+.+|+|.+++.                    .+++.++..++.|++.||+|||++||+|++.
T Consensus        82 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dl  150 (283)
T cd05090          82 -VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDL  150 (283)
T ss_pred             -eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhcc
Confidence             999999999999999871                    3678889999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.81  E-value=5.3e-19  Score=156.44  Aligned_cols=124  Identities=25%  Similarity=0.421  Sum_probs=108.0

Q ss_pred             ccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          120 QWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       120 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .|...++|++++.||+|+||.||++.+..++..||||++....     .+.+.+|+.+|+.++ |+||+++++++..+..
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~   88 (343)
T cd07880          10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMK-HENVIGLLDVFTPDLS   88 (343)
T ss_pred             hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcC-CCCccceeeeecCCcc
Confidence            3456789999999999999999999999999999999985421     346789999999999 9999999999876542


Q ss_pred             ----ceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 ----KTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ----~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                          ..+++||||+ |++|.+++  ..+++..++.++.||+.||+|||++||+|.+.
T Consensus        89 ~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dl  144 (343)
T cd07880          89 LDRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDL  144 (343)
T ss_pred             ccccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence                2369999999 68999888  57999999999999999999999999999854

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=5.7e-19  Score=153.95  Aligned_cols=118  Identities=19%  Similarity=0.278  Sum_probs=107.0

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||+|.+..+++.+|+|.+....      .+.+.+|+++++.++ |+||+++++.+.+...  .|
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~   77 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD-HPFLPTLYASFQTETY--LC   77 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC-CCCchhheeeeecCCE--EE
Confidence            47999999999999999999999999999999997532      346889999999999 9999999999988765  99


Q ss_pred             EEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||+.|++|.+++     ..+++..++.++.||+.||+|||++||+|.+.
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  129 (316)
T cd05574          78 LVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDL  129 (316)
T ss_pred             EEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            999999999999998     35899999999999999999999999999854

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.80  E-value=5.6e-19  Score=149.60  Aligned_cols=117  Identities=21%  Similarity=0.323  Sum_probs=103.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|+++++||+|+||.||+|.. .+++.||+|.+....  ...+.+|+.++++++ |+||+++++++... .  .++||
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~-~--~~~v~   79 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQ-HPRLVRLYAVVTQE-P--IYIIT   79 (260)
T ss_pred             hHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcC-CcCeeeEEEEEccC-C--cEEEE
Confidence            57899999999999999999986 467889999997543  467889999999999 99999999987543 3  89999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+.+|+|.+++     ..+++.++..++.|++.||+|||+.||+|++.
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl  128 (260)
T cd05067          80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDL  128 (260)
T ss_pred             EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccc
Confidence            999999999998     35899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.80  E-value=4.5e-19  Score=150.91  Aligned_cols=122  Identities=23%  Similarity=0.364  Sum_probs=106.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC----cee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS----KTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~----~~~  197 (252)
                      .+.|++.+.||+|+||.||+|.+..+++.||+|++...  ....+.+|+.++.++.+|+||+++++++...+.    ..+
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL   84 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence            56788899999999999999999999999999999653  345788999999999559999999999875421    348


Q ss_pred             EEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+||||+.+|+|.+++     ..+++..+..++.|++.||.|||++||||.+.
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl  137 (272)
T cd06637          85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDI  137 (272)
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Confidence            9999999999999998     25899999999999999999999999999743

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.80  E-value=3.3e-20  Score=146.20  Aligned_cols=115  Identities=25%  Similarity=0.443  Sum_probs=103.6

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|.-.++||+|.||+||++++..+++.||+|+++..+     -....+||.+|+.+. |.|||++++....+..  +-+|
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelk-hknivrl~dvlhsdkk--ltlv   79 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKK--LTLV   79 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhh-hcceeehhhhhccCce--eEEe
Confidence            4666789999999999999999999999999997543     345789999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      +|||+ .+|..+.    +.++.+.++.++.|+++||.|+|+++++|-+
T Consensus        80 fe~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrd  126 (292)
T KOG0662|consen   80 FEFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRD  126 (292)
T ss_pred             HHHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence            99998 6898887    6799999999999999999999999998863

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.80  E-value=6.5e-19  Score=150.07  Aligned_cols=117  Identities=20%  Similarity=0.307  Sum_probs=104.7

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-------------hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-------------KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      +|...+.||+|+||.||+|.+..+|+.+|+|.++...             .+.+.+|+.+++.++ |+||+++++++.+.
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~   80 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD-HLNIVQYLGFETTE   80 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC-CCCcceEEEEeccC
Confidence            4788899999999999999998899999999985311             235788999999999 99999999999888


Q ss_pred             CCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +.  +++||||+.||+|.+++   ..+++..++.++.||+.||.|||++|++|.+.
T Consensus        81 ~~--~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  134 (272)
T cd06629          81 EY--LSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDL  134 (272)
T ss_pred             Cc--eEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCC
Confidence            65  99999999999999998   56899999999999999999999999999854

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.80  E-value=9.1e-19  Score=149.93  Aligned_cols=117  Identities=25%  Similarity=0.445  Sum_probs=104.5

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      +|++.+.||.|++|.||+|.+..+|..||||+++..    ..+.+.+|+.+++.++ |+||+++++++.+.+.  .+|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~   77 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELK-HENIVRLHDVIHTENK--LMLVF   77 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhc-CCCEeeeeeeEeeCCc--EEEEE
Confidence            589999999999999999999999999999998753    2456778999999999 9999999999998876  99999


Q ss_pred             cCCCCCCHHhHc------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||++ |+|.+++      ..+++..+..++.||+.||+|||++||+|.+..
T Consensus        78 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~  127 (284)
T cd07836          78 EYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLK  127 (284)
T ss_pred             ecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence            9998 5888877      248999999999999999999999999998543

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.80  E-value=3.4e-19  Score=152.71  Aligned_cols=116  Identities=26%  Similarity=0.461  Sum_probs=103.6

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|++.+.||+|+||.||+|.+..+|..||+|.++...     ...+.+|+.+++.++ |+||+++++++.+...  +|+|
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~--~~lv   77 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLYDVLHSDKK--LTLV   77 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcC-CCCeeeHHHHhccCCc--eEEE
Confidence            5889999999999999999999999999999996422     345778999999999 9999999999998866  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++ ++|.+++    ..+++..++.++.||++||.|||++||+|.+.
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl  125 (284)
T cd07839          78 FEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDL  125 (284)
T ss_pred             EecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence            99997 5787776    45899999999999999999999999999854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.80  E-value=6.7e-19  Score=152.29  Aligned_cols=119  Identities=21%  Similarity=0.291  Sum_probs=108.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++.+.||+|+||.||++.+..++..||+|.+...   ..+.+.+|+.+++.++ |+||+++++.+...+.  .|+|
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~--~~lv   94 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK-HPNIVNYLDSYLVGDE--LWVV   94 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcC-CCCeeehhheeeeCCc--EEEE
Confidence            47899999999999999999999889999999998643   2456889999999999 9999999999998866  9999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+++++|.+++  ..+++..+..++.|++.||.|||++||+|.+.
T Consensus        95 ~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL  141 (293)
T cd06647          95 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDI  141 (293)
T ss_pred             EecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccC
Confidence            9999999999998  46899999999999999999999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.80  E-value=6.7e-19  Score=149.41  Aligned_cols=117  Identities=19%  Similarity=0.307  Sum_probs=103.8

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      +|++.+.||+|+||.||+|.. .++..+|+|.++...         ...+.+|+++++.++ |+||+++++++.+.+.  
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--   76 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HVNIVQYLGTCLDDNT--   76 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC-CCCEeeEeeEeecCCe--
Confidence            477889999999999999987 578899999986321         245889999999999 9999999999998865  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +++||||++|++|.+++   ..+++..+..++.|++.||+|||+.||+|.+..
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  129 (265)
T cd06631          77 ISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIK  129 (265)
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcC
Confidence            99999999999999998   468999999999999999999999999998543

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.80  E-value=9.7e-19  Score=147.99  Aligned_cols=118  Identities=17%  Similarity=0.273  Sum_probs=106.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||++.+. .+..+|||.+...  ..+.+.+|+.+++.++ |+||+++++++.+...  .++||
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~~v~   80 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLR-HDKLVQLYAVCSEEEP--IYIVT   80 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCC-CCCEeeeeeeeecCCc--eEEEE
Confidence            578999999999999999999974 5678999999753  3567899999999999 9999999999988765  99999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+++++|.+++     ..+++..+..++.||+.||.|||++||+|.+.
T Consensus        81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di  129 (261)
T cd05034          81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDL  129 (261)
T ss_pred             eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence            999999999998     25899999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.80  E-value=4.1e-19  Score=152.02  Aligned_cols=118  Identities=22%  Similarity=0.349  Sum_probs=106.9

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ..|+..+.||+|+||.||+|.+..++..||+|+++...    .+.+.+|+.+++.++ |+||+++++++.++..  .|||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv   80 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKGTK--LWII   80 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCE--EEEE
Confidence            45778899999999999999998899999999987432    456889999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++||+|.+++  +.+++.++..++.|++.||+|||++||+|.+.
T Consensus        81 ~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl  127 (277)
T cd06640          81 MEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDI  127 (277)
T ss_pred             EecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCC
Confidence            9999999999998  67899999999999999999999999999843

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.80  E-value=2.1e-19  Score=152.11  Aligned_cols=119  Identities=19%  Similarity=0.326  Sum_probs=107.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ..+|++.+.||+|+||.||+|.+.. +..+|+|.+....   ...+.+|+.+++.++ |+||+++++++.+...  +++|
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~lv   80 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLR-HKHLISLFAVCSVGEP--VYII   80 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCC-CcchhheeeeEecCCC--eEEE
Confidence            4579999999999999999999976 8899999997543   467889999999999 9999999999998876  9999


Q ss_pred             ecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||+++|+|.+++     ..+++..+..++.||+.||.|||++||+|.+..
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~  131 (261)
T cd05148          81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLA  131 (261)
T ss_pred             EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccC
Confidence            9999999999998     358999999999999999999999999997543

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.80  E-value=6.7e-19  Score=151.79  Aligned_cols=119  Identities=22%  Similarity=0.353  Sum_probs=105.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC----------------cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN----------------ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVV  183 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~----------------~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv  183 (252)
                      .++|++++.||+|+||.||+|.+..++                ..||+|.+....    .+.+.+|++++..++ |+||+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~   82 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLS-DPNIA   82 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcC-CCCEe
Confidence            568999999999999999999876543                568999987542    456889999999999 99999


Q ss_pred             eeeeEEEcCCCceeEEEecCCCCCCHHhHc---c-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          184 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLY---P-----------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       184 ~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l---~-----------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++++++..++.  .++||||+.+++|.+++   .           .+++..+..++.|++.||+|||++||+|++.
T Consensus        83 ~~~~~~~~~~~--~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dl  156 (296)
T cd05051          83 RLLGVCTVDPP--LCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDL  156 (296)
T ss_pred             EEEEEEecCCC--cEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence            99999998866  99999999999999998   2           5889999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.80  E-value=3.3e-19  Score=161.27  Aligned_cols=88  Identities=25%  Similarity=0.384  Sum_probs=76.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|.+.+.||+|+||.||+|.+.     .++..||+|+++...    .+.+.+|+++|..+.+|+|||++++++...+.
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~  115 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP  115 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence            467899999999999999999964     345689999997532    34688999999999779999999999998866


Q ss_pred             ceeEEEecCCCCCCHHhHc
Q 025443          195 KTPSLIFEYVNSTDFKVLY  213 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l  213 (252)
                        ++||||||++|+|.+++
T Consensus       116 --~~iv~E~~~~g~L~~~l  132 (401)
T cd05107         116 --IYIITEYCRYGDLVDYL  132 (401)
T ss_pred             --cEEEEeccCCCcHHHHH
Confidence              99999999999999987

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.80  E-value=7.8e-19  Score=150.30  Aligned_cols=119  Identities=18%  Similarity=0.298  Sum_probs=106.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-----CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-----TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|.+.+.||+|+||.||+|.+..     ++..||+|.++...    ...+.+|+.+++.++ |+||+++++++.+.+.
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~   83 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN-HQNIVRLIGVSFERLP   83 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCC
Confidence            5679999999999999999999977     67889999986432    346889999999999 9999999999988866


Q ss_pred             ceeEEEecCCCCCCHHhHc---c-------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---P-------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~-------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        .++||||++||+|.+++   .       .+++..+..++.||+.||+|||++||||++.
T Consensus        84 --~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dl  142 (277)
T cd05036          84 --RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDI  142 (277)
T ss_pred             --cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccc
Confidence              89999999999999998   1       4889999999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.80  E-value=5.5e-19  Score=149.43  Aligned_cols=117  Identities=15%  Similarity=0.203  Sum_probs=104.1

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .+|++.+.||+|+||.||++.+. ++..+|+|++...  ....+.+|+++++.++ |+||+++++++.+.+.  .|+|||
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~lv~e   79 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLS-HPNLVQLYGVCTKQRP--IFIVTE   79 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCc--eEEEEe
Confidence            46888999999999999999885 5678999998653  2457889999999999 9999999999988866  999999


Q ss_pred             CCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |++|++|.+++    ..+++..+..++.||+.||.|||++||+|.+.
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl  126 (256)
T cd05059          80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDL  126 (256)
T ss_pred             cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            99999999998    35799999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.80  E-value=7.4e-19  Score=149.97  Aligned_cols=119  Identities=18%  Similarity=0.281  Sum_probs=104.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC-----cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN-----ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+...+     ..||+|.+....    ...+.+|+.+++.++ |+||+++++++.....
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~   83 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFN-CHHVVRLLGVVSTGQP   83 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCC-CCceeEEEEEEcCCCC
Confidence            578999999999999999999986443     789999986432    346789999999999 9999999999998866


Q ss_pred             ceeEEEecCCCCCCHHhHcc-------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP-------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~-------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        .++||||+++|+|.+++.             .+++..+..++.||+.||.|||+.||+|++.
T Consensus        84 --~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di  145 (277)
T cd05032          84 --TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDL  145 (277)
T ss_pred             --cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence              999999999999999981             2577889999999999999999999999964

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.80  E-value=1.1e-18  Score=149.55  Aligned_cols=119  Identities=20%  Similarity=0.280  Sum_probs=104.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc----EEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE----RCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++.+.||+|+||.||+|.+..+|.    .+|+|.++...    ...+.+|+.++..++ |+||+++++++.. .. 
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~-   82 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVD-HPHVVRLLGICLS-SQ-   82 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEec-Cc-
Confidence            5789999999999999999999876664    58999886543    356889999999999 9999999999987 33 


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                       .++||||+.+|+|.+++    ..+++..+..++.||+.||+|||++||+|.+..
T Consensus        83 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~  136 (279)
T cd05057          83 -VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLA  136 (279)
T ss_pred             -eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccC
Confidence             89999999999999998    358999999999999999999999999998543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.80  E-value=1.4e-18  Score=146.50  Aligned_cols=119  Identities=18%  Similarity=0.249  Sum_probs=104.8

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|++.+.||+|+||.||++.+..+++.||+|.+...     ..+.+.+|+++++.++ |+|++++++.+...+ ..+|+|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~-~~~~lv   78 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLK-HPNIVAYRESWEGED-GLLYIV   78 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCC-CCCeeeeeeeecCCC-CEEEEE
Confidence            589999999999999999999999999999999642     2356789999999999 999999999886543 348999


Q ss_pred             ecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||+++++|.+++     ..+++.++..++.|++.||+|||++||||.+..
T Consensus        79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~  129 (257)
T cd08223          79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLK  129 (257)
T ss_pred             ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            9999999999988     348999999999999999999999999998543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.80  E-value=4.6e-18  Score=156.14  Aligned_cols=115  Identities=17%  Similarity=0.173  Sum_probs=103.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      ..+|.+.+.||+|+||.||+|.+..+++.||||...   ...+.+|+++|++|+ |+|||++++++...+.  .|||||+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---~~~~~~E~~iL~~L~-HpnIv~l~~~~~~~~~--~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---YASSVHEARLLRRLS-HPAVLALLDVRVVGGL--TCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---ccCHHHHHHHHHHCC-CCCCCcEEEEEEECCE--EEEEEEc
Confidence            457999999999999999999999999999999643   234678999999999 9999999999988865  9999999


Q ss_pred             CCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +. ++|.+++    ..+++.+++.|+.||+.||.|||++||||.+.
T Consensus       242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDL  286 (461)
T PHA03211        242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDI  286 (461)
T ss_pred             cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcC
Confidence            96 7888887    35899999999999999999999999999854

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.80  E-value=9e-19  Score=150.78  Aligned_cols=118  Identities=18%  Similarity=0.367  Sum_probs=104.5

Q ss_pred             CeEEEeEeeecCceEEEEEEEc---CCCcEEEEEEeeccc-------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          126 DYEVVRKVGRGKYSEVFEGINV---NTNERCIIKILKPVK-------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~~-------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      +|++.+.||+|+||.||++.+.   .+|..||+|+++...       .+.+.+|+.+++.+.+|+||+.+++++..+.. 
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~-   79 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTK-   79 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCe-
Confidence            4888999999999999999875   478999999996421       35678899999999669999999999988865 


Q ss_pred             eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       +|+||||+++++|.+++   ..+++..+..++.||+.||.|||++||+|.+.
T Consensus        80 -~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl  131 (290)
T cd05613          80 -LHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDI  131 (290)
T ss_pred             -EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence             99999999999999998   56899999999999999999999999999853

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.80  E-value=6.7e-19  Score=148.28  Aligned_cols=119  Identities=22%  Similarity=0.367  Sum_probs=108.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .++|++.+.||+|+||.||+|.+..++..+++|.++... .+.+.+|+++++.++ |+||+++++++.+...  +|++||
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~--~~l~~e   78 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCD-SPYIVKYYGSYFKNTD--LWIVME   78 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCC-CCcEeeeeeeeecCCc--EEEEEe
Confidence            467999999999999999999998889999999997543 678899999999998 9999999999998865  999999


Q ss_pred             CCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+.+++|.+++    ..+++..+..++.|++.||.|||+.||+|.+.
T Consensus        79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl  125 (256)
T cd06612          79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDI  125 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            99999999998    45899999999999999999999999999854

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.80  E-value=1.5e-18  Score=149.30  Aligned_cols=120  Identities=24%  Similarity=0.435  Sum_probs=98.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcC-CCcEEEEEEeeccc-----hHHHHHHHHHHHhcC--CCCcceeeeeEEEcC---C
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVN-TNERCIIKILKPVK-----KKKIKREIKILQNLC--GGPNVVKLLDIVRDQ---H  193 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~--~h~nIv~l~~~~~~~---~  193 (252)
                      ++|++.+.||+|+||.||+|++.. ++..||+|+++...     ...+.+|+.+++.++  .|+||+++++++...   .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            369999999999999999999854 46889999986422     345667888887763  299999999998632   1


Q ss_pred             CceeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          194 SKTPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       194 ~~~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ...+++||||++ ++|.+++     ..+++..+..++.||+.||.|||++||+|++.
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dl  136 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL  136 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence            234899999997 6898888     34899999999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.80  E-value=3.2e-19  Score=153.13  Aligned_cols=118  Identities=19%  Similarity=0.328  Sum_probs=105.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ++|++++.||+|+||.||++.+..++..+|+|.++...    ...+.+|+.++++++ |+||+++++.+..++.  +|+|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~--~~lv   77 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAV-SPYIVDFYGAFFIEGA--VYMC   77 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcC-CCcHHhhhhheecCCe--EEEE
Confidence            46889999999999999999998899999999986431    356889999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc-c-----CCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          201 FEYVNSTDFKVLY-P-----TLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l-~-----~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      |||++|++|..++ .     .+++..+..++.||+.||.|||+ .||+|.+.
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl  129 (286)
T cd06622          78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDV  129 (286)
T ss_pred             EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCC
Confidence            9999999999888 2     68999999999999999999997 59999853

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.80  E-value=4.2e-19  Score=153.40  Aligned_cols=119  Identities=19%  Similarity=0.334  Sum_probs=103.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC--------------cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN--------------ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKL  185 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~--------------~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l  185 (252)
                      .++|++.+.||+|+||.||+|.+..++              ..||+|.++...    ...+.+|++++++++ |+||+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~   82 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLK-NPNIIRL   82 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCC-CCCcCeE
Confidence            468999999999999999999875432              358999987532    346889999999999 9999999


Q ss_pred             eeEEEcCCCceeEEEecCCCCCCHHhHcc---------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          186 LDIVRDQHSKTPSLIFEYVNSTDFKVLYP---------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       186 ~~~~~~~~~~~~~lV~E~~~gg~L~~~l~---------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++++...+.  .++||||+.+++|.+++.               .+++..+..++.|++.||.|||++||+|++.
T Consensus        83 ~~~~~~~~~--~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dl  155 (295)
T cd05097          83 LGVCVSDDP--LCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDL  155 (295)
T ss_pred             EEEEcCCCc--cEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeecccc
Confidence            999988866  999999999999999881               2678889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.80  E-value=1.1e-18  Score=147.73  Aligned_cols=117  Identities=24%  Similarity=0.380  Sum_probs=106.5

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|++.+.||+|+||.||++.+..++..||+|.++..     ..+.+.+|+.+++.++ |+||+++++++.+.+.  +++|
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~--~~lv   77 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLK-HPNLVKYYGVEVHREK--VYIF   77 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCC-CCChhheeeeEecCCE--EEEE
Confidence            588999999999999999999889999999999753     2457889999999999 9999999999888765  9999


Q ss_pred             ecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+++++|.+++   ..+++..+..++.|++.||.|||++||+|.+.
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl  125 (264)
T cd06626          78 MEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDI  125 (264)
T ss_pred             EecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            9999999999999   34899999999999999999999999999854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.80  E-value=2e-18  Score=148.66  Aligned_cols=123  Identities=25%  Similarity=0.403  Sum_probs=107.4

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC---cee
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS---KTP  197 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~---~~~  197 (252)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|++....  ...+.+|+.++.++.+|+||+++++++.+.+.   ..+
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~   99 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL   99 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence            3688999999999999999999999999999999996532  45678899999999449999999999875431   348


Q ss_pred             EEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+||||++||+|.+++       ..+++..++.++.|++.||+|||++||||.+.
T Consensus       100 ~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dl  154 (291)
T cd06639         100 WLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDV  154 (291)
T ss_pred             EEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            9999999999999886       35899999999999999999999999999753

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.80  E-value=7e-19  Score=150.82  Aligned_cols=117  Identities=32%  Similarity=0.448  Sum_probs=105.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++|++.+.||+|+||.||+|.+..+++.||+|+++..     ..+.+.+|+++++.++ |+||+++++++.+++.  .++
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~i   77 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGR--LYL   77 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcC-CCCeeehhheEEECCE--EEE
Confidence            4799999999999999999999999999999998642     2467889999999999 9999999999998765  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ||||++++++..++   ..+++.++..++.||+.||.|||++||+|++
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d  125 (288)
T cd07833          78 VFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRD  125 (288)
T ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            99999988777666   4589999999999999999999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.80  E-value=7.4e-19  Score=148.11  Aligned_cols=118  Identities=17%  Similarity=0.358  Sum_probs=106.6

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|++.+.||+|+||.||++.+..+|..+|+|.+...     ..+.+.+|+.+++.++ |+||+++++.+.....  .|+|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~-h~~i~~~~~~~~~~~~--~~lv   77 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMK-HPNIVTFFASFQENGR--LFIV   77 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCC-CCChhhhhheeccCCe--EEEE
Confidence            588999999999999999999999999999999643     3457889999999999 9999999999988866  9999


Q ss_pred             ecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||+.+++|.+++     ..+++..+..++.|++.||.|||++||+|.+..
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~  128 (257)
T cd08225          78 MEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIK  128 (257)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCC
Confidence            9999999999998     247899999999999999999999999998543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=6.3e-19  Score=150.42  Aligned_cols=118  Identities=19%  Similarity=0.310  Sum_probs=107.3

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ++|++.+.||.|+||.||+|.+..++..+|+|.+....    ...+.+|+++++.++ |+||+++++++.++..  +|+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~~v   77 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSK--LWII   77 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCe--EEEE
Confidence            46888999999999999999999999999999986432    456789999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||+++++|.+++  ..+++..+..++.|++.||.|||++||+|++.
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl  124 (274)
T cd06609          78 MEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDI  124 (274)
T ss_pred             EEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            9999999999999  47899999999999999999999999999854

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.80  E-value=1.2e-18  Score=148.15  Aligned_cols=120  Identities=19%  Similarity=0.297  Sum_probs=106.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc---EEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE---RCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|+..+.||+|+||.||+|.+..++.   .+|+|.++...    .+.+.+|+++++.++ |+||+++++++.+.+.  
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--   80 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFS-HHNIIRLEGVVTKFKP--   80 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEccCCC--
Confidence            4578899999999999999999876654   79999986532    456889999999999 9999999999998876  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .|+||||+++++|.+++    ..+++..+..++.|++.||+|||++||+|++..
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlk  134 (268)
T cd05063          81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLA  134 (268)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence            99999999999999998    358999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.80  E-value=1.4e-18  Score=146.67  Aligned_cols=119  Identities=22%  Similarity=0.312  Sum_probs=105.4

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|++.+.||.|+||.||++.+..++..||+|++...     ..+++.+|+.+++.++ |+||+++++++.......+|++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~~   79 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELK-HPNIVRYYDRIIDRSNQTLYIV   79 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcC-CCccceeeeeeecCCCCEEEEE
Confidence            588999999999999999999999999999998643     2456788999999999 9999999998876554568999


Q ss_pred             ecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHH-----HCCCeEEee
Q 025443          201 FEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFI-----RWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH-----~~~IV~~~~  245 (252)
                      |||+++++|.+++       ..+++..+..++.||+.||.|||     +.+|+|.+.
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl  136 (265)
T cd08217          80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDL  136 (265)
T ss_pred             ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCC
Confidence            9999999999998       35899999999999999999999     899999743

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.80  E-value=8.4e-19  Score=152.41  Aligned_cols=120  Identities=22%  Similarity=0.316  Sum_probs=104.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEE-----cCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGIN-----VNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|.+.+.||+|+||.||++.+     ..++..||+|.++...    .+.+.+|+.+++++.+|+||+++++++...+.
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            46899999999999999999975     2345689999987532    35688999999999339999999999998876


Q ss_pred             ceeEEEecCCCCCCHHhHcc-----CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP-----TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~-----~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        .|+||||+.+|+|.+++.     .+++.++..++.|++.||+|||++||+|++.
T Consensus       114 --~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dl  167 (302)
T cd05055         114 --ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDL  167 (302)
T ss_pred             --eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhh
Confidence              999999999999999982     2799999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.79  E-value=1.1e-18  Score=150.23  Aligned_cols=119  Identities=18%  Similarity=0.284  Sum_probs=102.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-----CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-----TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|..+.     .+..||+|.++...    ...+.+|+.+++.++ |+||+++++++.+.+.
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~   83 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT-CHHVVRLLGVVSKGQP   83 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCC
Confidence            5789999999999999999997642     34579999986432    345778999999999 9999999999988866


Q ss_pred             ceeEEEecCCCCCCHHhHcc-------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP-------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~-------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        .|+||||+++|+|.+++.             .++...+..++.||+.||.|||++||+|++.
T Consensus        84 --~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~di  145 (288)
T cd05061          84 --TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL  145 (288)
T ss_pred             --cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCC
Confidence              999999999999999982             1356788899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.79  E-value=9e-19  Score=149.70  Aligned_cols=122  Identities=19%  Similarity=0.264  Sum_probs=106.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC----CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN----TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~----~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .+.|++.+.||+|+||.||++....    ++..+|+|.++...    .+.+.+|+++++.++ |+||+++++++...+..
T Consensus         3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~-~~~i~~~~~~~~~~~~~   81 (284)
T cd05038           3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD-HENIVKYKGVCEKPGGR   81 (284)
T ss_pred             hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCC-CCChheEEeeeecCCCC
Confidence            3568888999999999999998643    47899999997543    457899999999998 99999999999875544


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ..++||||+++|+|.+++    ..+++..+..++.|++.||+|||++||+|.+..
T Consensus        82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~  136 (284)
T cd05038          82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLA  136 (284)
T ss_pred             ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            599999999999999999    248999999999999999999999999997543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.79  E-value=6.3e-19  Score=150.20  Aligned_cols=120  Identities=25%  Similarity=0.383  Sum_probs=108.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|.+.+.||+|+||.||++.+..++..||+|++...      ..+.+.+|+.+++++++|+||+++++++.+++.  ++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~--~~   78 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEEN--LY   78 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCce--EE
Confidence            4699999999999999999999999999999998642      235678999999999779999999999988865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||+++++|.+++   ..+++..+..++.|++.||.|||+.|++|.+.+
T Consensus        79 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~  129 (280)
T cd05581          79 FVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLK  129 (280)
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            999999999999999   468999999999999999999999999998543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.79  E-value=1.9e-19  Score=154.07  Aligned_cols=117  Identities=21%  Similarity=0.329  Sum_probs=105.3

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +.|+..+.||+|+||.||+|.+..++..||+|.++...    .+.+.+|+++++.++ |+||+++++++..+..  .|+|
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv   80 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYITRYYGSYLKGTK--LWII   80 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCC-CCccHhhhcccccCCc--eEEE
Confidence            34667788999999999999998899999999987432    356889999999999 9999999999998866  9999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||++|++|.+++  +.+++..++.++.||++||.|||++||||.+
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~d  126 (277)
T cd06642          81 MEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRD  126 (277)
T ss_pred             EEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccC
Confidence            9999999999998  6689999999999999999999999999974

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.79  E-value=2.1e-18  Score=145.98  Aligned_cols=117  Identities=21%  Similarity=0.304  Sum_probs=106.0

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ++|++.+.||.|+||+||+|....++..+|+|++...    ..+.+.+|+++++.++ |+||+++++.+...+.  .++|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~iv   77 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCN-HPNVVKYYTSFVVGDE--LWLV   77 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcC-CCCEEEEEEEEeeCCE--EEEE
Confidence            4799999999999999999999889999999998643    2467899999999999 9999999999988765  9999


Q ss_pred             ecCCCCCCHHhHc------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          201 FEYVNSTDFKVLY------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       201 ~E~~~gg~L~~~l------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||++|++|.+++      ..+++..+..++.|++.||+|||++||+|.+
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~  127 (267)
T cd06610          78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRD  127 (267)
T ss_pred             EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999999999998      2479999999999999999999999999974

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.79  E-value=7.3e-19  Score=148.91  Aligned_cols=118  Identities=19%  Similarity=0.311  Sum_probs=103.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||+|.+. .+..+|+|.++..  ..+.+.+|+.++++++ |+||+++++++... .  .++||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~-~--~~lv~   79 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLR-HDKLVQLYAVVSEE-P--IYIVT   79 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcC-CCceEEEEeEECCC-C--cEEEE
Confidence            568999999999999999999874 5677999999753  3467899999999999 99999999987543 3  89999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||+++++|.+++     ..+++..++.++.|++.||.|||++||+|++..
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~  129 (260)
T cd05070          80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLR  129 (260)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCc
Confidence            999999999998     248999999999999999999999999998543

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.79  E-value=1.1e-19  Score=156.31  Aligned_cols=117  Identities=24%  Similarity=0.399  Sum_probs=101.0

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc---eeEEEe
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK---TPSLIF  201 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~---~~~lV~  201 (252)
                      -.|...+.+|.|+||.||+|....+++.||||.+-+... --.+|+.+|+.+. |||||+|.-+|.....+   +..+||
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-~knrEl~im~~l~-HpNIV~L~~~f~~~~~~d~~~lnlVl  101 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-YKNRELQIMRKLD-HPNIVRLLYFFSSSTESDEVYLNLVL  101 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-cCcHHHHHHHhcC-CcCeeeEEEEEEecCCCchhHHHHHH
Confidence            458888999999999999999999999999999865432 2358999999999 99999999988755443   577999


Q ss_pred             cCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          202 EYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       202 E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||+ .+|.+.+       .+++.-.++-+..||++||.|||+.||+|=+
T Consensus       102 eymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRD  150 (364)
T KOG0658|consen  102 EYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRD  150 (364)
T ss_pred             Hhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCC
Confidence            9998 6888888       4688899999999999999999999998754

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.79  E-value=1.8e-18  Score=150.42  Aligned_cols=121  Identities=21%  Similarity=0.387  Sum_probs=105.6

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..++|++.+.||+|+||.||+|.+..+|..||+|.++...     ...+.+|+.++++++ |+||+++++++.+...+.+
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~   83 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLR-HPNIVELKEVVVGKHLDSI   83 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCC-CCCCcceEEEEecCCCCeE
Confidence            3678999999999999999999999999999999996432     234568999999999 9999999999987654458


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++||||++ ++|.+++    ..+++.++..++.||+.||.|||++||+|.+.
T Consensus        84 ~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  134 (309)
T cd07845          84 FLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDL  134 (309)
T ss_pred             EEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            99999997 5888877    45899999999999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.79  E-value=1.3e-18  Score=146.92  Aligned_cols=117  Identities=17%  Similarity=0.247  Sum_probs=106.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||.|+||.||+|..  .|+.||+|.++...  .+++.+|+.+++.++ |+||+++++++.+...  .++||
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~~v~   79 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLR-HPNLVQLLGVVLQGNP--LYIVT   79 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcC-CcceeeeEEEEcCCCC--eEEEE
Confidence            56789999999999999999988  48899999997653  467899999999999 9999999999998765  99999


Q ss_pred             cCCCCCCHHhHc---c--CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY---P--TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l---~--~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+++++|.+++   .  .+++..+..++.|++.||.|||++||+|.+.
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di  128 (256)
T cd05039          80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDL  128 (256)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhc
Confidence            999999999998   2  5899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.79  E-value=1.2e-18  Score=152.02  Aligned_cols=114  Identities=21%  Similarity=0.321  Sum_probs=97.9

Q ss_pred             EeEeeecCceEEEEEEEc--CCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          130 VRKVGRGKYSEVFEGINV--NTNERCIIKILKPVK-KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~~-~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      .++||+|+||.||+|.++  .+++.+|+|.++... ...+.+|+.+|++++ |+||+++++++.......+|+||||++ 
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~e~~~-   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAE-   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcC-CCCCcceeeeEecCCCcEEEEEEeccC-
Confidence            368999999999999975  367889999997543 456789999999999 999999999997655566999999996 


Q ss_pred             CCHHhHc------------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          207 TDFKVLY------------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       207 g~L~~~l------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++|.+++            ..+++..++.++.||+.||+|||++||||.+.
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDl  134 (317)
T cd07868          84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDL  134 (317)
T ss_pred             CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCC
Confidence            6888776            14889999999999999999999999999854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.79  E-value=8.5e-19  Score=150.36  Aligned_cols=117  Identities=21%  Similarity=0.303  Sum_probs=105.0

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      -|++.+.||+|+||.||++.+..++..+++|.+....   .+.+.+|+++++.++ |+||+++++++..++.  .|+|||
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~--~~~v~e   82 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENN--LWILIE   82 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCC-CCCeeeEEEEEeeCCE--EEEEEE
Confidence            3677889999999999999999999999999986543   456789999999999 9999999999988865  999999


Q ss_pred             CCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+++|+|..++    ..+++..+..++.||+.||.|||+.||+|.+.
T Consensus        83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dl  129 (282)
T cd06643          83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDL  129 (282)
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence            99999999887    45899999999999999999999999999853

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.79  E-value=5.6e-19  Score=151.72  Aligned_cols=119  Identities=13%  Similarity=0.233  Sum_probs=107.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++++.||+|+||+||++.+..+++.||+|++....    .+.+.+|+++++.++ |+||+++++.+.+.+.  ++|
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~--~~l   80 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECR-SPYIVSFYGAFLNENN--ICM   80 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcC-CCCcceEeeeEecCCE--EEE
Confidence            467889999999999999999999999999999986432    467889999999999 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      ||||+++|+|.+++   +.+++..+..++.|++.||.|||+ .||+|.+.
T Consensus        81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl  130 (284)
T cd06620          81 CMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDI  130 (284)
T ss_pred             EEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCC
Confidence            99999999999988   468999999999999999999997 68999853

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.79  E-value=1.3e-18  Score=151.29  Aligned_cols=120  Identities=15%  Similarity=0.252  Sum_probs=103.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-------CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-------TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      .++|.+.+.||+|+||.||++.+..       ++..+|+|.++...    ...+.+|+.+++.+.+|+||+++++++.+.
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            4789999999999999999998643       23579999997532    346788999999994499999999999988


Q ss_pred             CCceeEEEecCCCCCCHHhHcc-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLYP-------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l~-------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +.  +|+||||+.+|+|.+++.                   .+++.+++.++.|++.||+|||++||+|.+.
T Consensus        97 ~~--~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dl  166 (307)
T cd05098          97 GP--LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDL  166 (307)
T ss_pred             Cc--eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            76  999999999999999981                   2788899999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.79  E-value=2.1e-18  Score=145.81  Aligned_cols=118  Identities=20%  Similarity=0.281  Sum_probs=108.3

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ++|++.+.||+|++|.||+|.+..+++.|++|++....    .+.+.+|+.++..++ |+||+++++++...+.  .++|
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~lv   77 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGE--ISIV   77 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCe--EEEE
Confidence            36889999999999999999999999999999997543    567899999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          201 FEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      |||+++++|.+++   ..+++..+..++.|+++||+|||+ +|++|.+.
T Consensus        78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l  126 (264)
T cd06623          78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDI  126 (264)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCC
Confidence            9999999999999   568999999999999999999999 99999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.79  E-value=2e-18  Score=147.75  Aligned_cols=117  Identities=19%  Similarity=0.279  Sum_probs=99.8

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHH-HHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKI-LQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~i-l~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++|++.+.||+|+||.||++.+..+|+.||+|+++...    ...+..|+.+ ++.++ |+||+++++++..++.  +|+
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~iv~~~~~~~~~~~--~~l   77 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVD-CPYTVTFYGALFREGD--VWI   77 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcC-CCCeeeeeEEEecCCc--EEE
Confidence            46899999999999999999999999999999997532    3455667776 44555 9999999999998866  999


Q ss_pred             EecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHC-CCeEEee
Q 025443          200 IFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRW-STVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~-~IV~~~~  245 (252)
                      ||||++ |+|.+++       ..+++..+..++.||+.||+|||++ +|+|++.
T Consensus        78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dl  130 (283)
T cd06617          78 CMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDV  130 (283)
T ss_pred             Ehhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCC
Confidence            999997 6887776       2589999999999999999999997 9999754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.79  E-value=9.4e-19  Score=149.91  Aligned_cols=120  Identities=20%  Similarity=0.354  Sum_probs=104.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC-----cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN-----ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+...+     ..||+|.++...    ...+.+|+.++..++ |+||+++++++.+.+.
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~   82 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ-HPNIVCLLGVCTKEQP   82 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcC-CcccceEEEEEcCCCc
Confidence            457899999999999999999976554     679999996432    356889999999999 9999999999988766


Q ss_pred             ceeEEEecCCCCCCHHhHc-------------------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY-------------------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l-------------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        .|++|||+++|+|.+++                   ..+++..+..++.||+.||.|||++||+|++..
T Consensus        83 --~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlk  151 (283)
T cd05048          83 --TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLA  151 (283)
T ss_pred             --eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence              99999999999999988                   126788899999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.79  E-value=1.2e-18  Score=149.10  Aligned_cols=119  Identities=19%  Similarity=0.283  Sum_probs=102.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-----CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-----TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+..     ++..||+|.+....    ...+.+|+.+++.++ |+||+++++++.+...
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~   83 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVVRLLGVVSQGQP   83 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCC
Confidence            5789999999999999999998642     35679999986432    345789999999999 9999999999988766


Q ss_pred             ceeEEEecCCCCCCHHhHcc-------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP-------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~-------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        .++||||+.+|+|.+++.             .+++..+..++.|++.||+|||+.||||++.
T Consensus        84 --~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dl  145 (277)
T cd05062          84 --TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDL  145 (277)
T ss_pred             --eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCc
Confidence              999999999999999982             1467788999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.79  E-value=1.2e-18  Score=149.41  Aligned_cols=116  Identities=27%  Similarity=0.461  Sum_probs=103.7

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|+.++.||+|+||.||+|.+..++..||||.++...     ...+.+|++++++++ |+||+++++++.+.+.  .++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~--~~~v   77 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENK--LYLV   77 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcC-CCCCcchhhhcccCCc--EEEE
Confidence            4889999999999999999999999999999986432     356889999999999 9999999999988766  9999


Q ss_pred             ecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+. ++|..++     ..+++..+..++.|++.||+|||++||+|.+.
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l  126 (284)
T cd07860          78 FEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL  126 (284)
T ss_pred             eeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            99996 6888887     45899999999999999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.79  E-value=2e-18  Score=148.31  Aligned_cols=119  Identities=23%  Similarity=0.404  Sum_probs=99.8

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcC--CCCcceeeeeEEEcCC---Cc
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLC--GGPNVVKLLDIVRDQH---SK  195 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~--~h~nIv~l~~~~~~~~---~~  195 (252)
                      +|++.+.||+|+||.||+|.+..+++.||+|.++...     ...+.+|+.+++.+.  +|+||+++++++.+..   ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            5889999999999999999999999999999986421     235667888887763  2999999999886532   23


Q ss_pred             eeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .+++||||+. ++|.+++     ..+++..++.++.||+.||.|||++||||.+.
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~di  134 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL  134 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            4899999998 5888887     24899999999999999999999999999753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.79  E-value=2.3e-18  Score=146.43  Aligned_cols=118  Identities=19%  Similarity=0.247  Sum_probs=103.3

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      +.+.....||+|+||.||+|.+..++..||+|.+....   .+.+.+|+.+++.++ |+||+++++++.+++.  +++||
T Consensus         8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~--~~lv~   84 (268)
T cd06624           8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLK-HRNIVQYLGSDSENGF--FKIFM   84 (268)
T ss_pred             ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcC-CCCeeeeeeeeccCCE--EEEEE
Confidence            34444468999999999999998899999999986543   457889999999999 9999999999998865  99999


Q ss_pred             cCCCCCCHHhHc----cCC--CHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY----PTL--TDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l--~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||++|++|.+++    ..+  ++..+..++.||+.||+|||++||+|.+.
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl  134 (268)
T cd06624          85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDI  134 (268)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence            999999999998    234  78889999999999999999999999754

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=1.3e-18  Score=148.53  Aligned_cols=118  Identities=23%  Similarity=0.344  Sum_probs=105.5

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcC--CCCcceeeeeEEEcCCCceeEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLC--GGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~--~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .|+..+.||+|+||.||+|.+..++..+|+|.++..    ....+.+|+.+++.++  +|+||+++++++.+...  .|+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~--~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPR--LWI   79 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCE--EEE
Confidence            477788999999999999999999999999998643    2456889999999986  49999999999988755  999


Q ss_pred             EecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||++|++|.+++  +.+++..+..++.|++.||.|||++||+|++.
T Consensus        80 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl  127 (277)
T cd06917          80 IMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDI  127 (277)
T ss_pred             EEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence            99999999999998  67899999999999999999999999999854

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.79  E-value=2.2e-18  Score=147.58  Aligned_cols=118  Identities=20%  Similarity=0.284  Sum_probs=103.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc----EEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE----RCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++.+.||+|+||.||+|.+..++.    .||+|.++...    .+.+.+|+.++..+. |+||+.+++++....  
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~--   82 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG-SPYVCRLLGICLTST--   82 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcC-CCCCceEEEEEcCCC--
Confidence            5789999999999999999999877766    48999986432    456789999999999 999999999987643  


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       .+++|||+++|+|.+++    ..+++..+..++.||+.||+|||++||+|.+.
T Consensus        83 -~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dl  135 (279)
T cd05109          83 -VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDL  135 (279)
T ss_pred             -cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence             78999999999999998    35899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.79  E-value=1.1e-18  Score=150.84  Aligned_cols=119  Identities=19%  Similarity=0.310  Sum_probs=102.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC----------------CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN----------------TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVV  183 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~----------------~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv  183 (252)
                      .++|++.+.||+|+||.||++.+..                ++..+|+|.++...    .+.+.+|+.+++.++ |+||+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~   82 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLK-DPNII   82 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCcc
Confidence            4679999999999999999986532                34579999997532    356889999999999 99999


Q ss_pred             eeeeEEEcCCCceeEEEecCCCCCCHHhHcc--------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          184 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP--------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       184 ~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l~--------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++++++.+.+.  .++||||+++|+|.+++.              .+++.++..++.||+.||+|||++||+|++.
T Consensus        83 ~~~~~~~~~~~--~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl  156 (296)
T cd05095          83 RLLAVCITSDP--LCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDL  156 (296)
T ss_pred             eEEEEEecCCc--cEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccC
Confidence            99999998876  999999999999999981              2567789999999999999999999999854

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.79  E-value=1.3e-18  Score=148.05  Aligned_cols=112  Identities=16%  Similarity=0.214  Sum_probs=94.7

Q ss_pred             eEeeecCceEEEEEEEcC--CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVN--TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~--~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||+|....  ....+|+|.+....    ...+.+|+.+++.++ |+||+++++.+.+...  +||||||+
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~-h~nii~~~~~~~~~~~--~~lv~e~~   77 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELN-HPNVLQCLGQCIESIP--YLLVLEFC   77 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCC-CCCcceEEEEECCCCc--eEEEEEeC
Confidence            368999999999996533  34578999875432    346789999999999 9999999999988866  99999999


Q ss_pred             CCCCHHhHc--------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY--------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l--------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++|+|.+++        ..+++..+..++.||+.||+|||++||||.+.
T Consensus        78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  126 (269)
T cd05042          78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDL  126 (269)
T ss_pred             CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccc
Confidence            999999998        12467788999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.79  E-value=2.5e-18  Score=145.77  Aligned_cols=118  Identities=19%  Similarity=0.254  Sum_probs=102.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++...||+|+||.||++.+..+ ..+|+|.+....  .+.+.+|+.+++.++ |+||+++++++... .  .++||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~-~--~~~v~   79 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLR-HDKLVPLYAVVSEE-P--IYIVT   79 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCC-CCCeeeEEEEEcCC-C--cEEEE
Confidence            46799999999999999999988554 469999987533  467889999999999 99999999988543 3  79999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||+.+|+|.+++     ..+++..+..++.||+.||.|||+.||+|.+..
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~  129 (260)
T cd05069          80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLR  129 (260)
T ss_pred             EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccC
Confidence            999999999998     237899999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.79  E-value=2.6e-18  Score=148.00  Aligned_cols=120  Identities=28%  Similarity=0.443  Sum_probs=103.1

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC---ce
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS---KT  196 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~---~~  196 (252)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.++...     ...+.+|+.+++.+..|+||+++++++.....   ..
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46999999999999999999999999999999986432     35678899999999757999999999876532   23


Q ss_pred             eEEEecCCCCCCHHhHc--------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY--------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l--------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|+||||+++ +|.+++        ..+++..++.++.||+.||.|||++||+|++.
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl  136 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDL  136 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence            7999999985 888887        13799999999999999999999999999854

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.78  E-value=1.5e-18  Score=149.68  Aligned_cols=120  Identities=25%  Similarity=0.363  Sum_probs=105.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|.++...     ...+.+|+.+++.++ |+||+++++++...+...+|
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~   82 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDKIY   82 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCcEE
Confidence            467999999999999999999999899999999997432     235678999999999 99999999999877334499


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||++ ++|.+++    ..+++..++.++.||+.||+|||++||+|.+.
T Consensus        83 lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl  132 (293)
T cd07843          83 MVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDL  132 (293)
T ss_pred             EEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence            9999997 5998887    34899999999999999999999999999754

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.78  E-value=1.8e-18  Score=148.15  Aligned_cols=122  Identities=22%  Similarity=0.353  Sum_probs=106.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcC----CCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQ----HSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~----~~~~~  197 (252)
                      .+.|++.+.||+|+||.||+|.+..+++.+|+|++....  ...+..|+.+++++.+|+||+++++++...    ....+
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   94 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL   94 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence            578999999999999999999999999999999986542  456789999999995599999999998642    12458


Q ss_pred             EEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+||||+.+|+|.+++     ..+++..+..++.||+.||.|||++||||.+.
T Consensus        95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl  147 (282)
T cd06636          95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDI  147 (282)
T ss_pred             EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            9999999999999988     34789999999999999999999999999843

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.78  E-value=1.4e-18  Score=149.17  Aligned_cols=118  Identities=16%  Similarity=0.201  Sum_probs=101.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc----EEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE----RCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++.+.||+|+||.||+|.+..++.    .+++|.+....    ..++..|+.++.+++ |+||+++++++... . 
T Consensus         6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~iv~~~~~~~~~-~-   82 (279)
T cd05111           6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLD-HAYIVRLLGICPGA-S-   82 (279)
T ss_pred             HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCC-CCCcceEEEEECCC-c-
Confidence            4678999999999999999999977776    47888875332    346778888999999 99999999987543 2 


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       .+++|||+.+|+|.+++    +.+++..+..++.||+.||+|||++||+|++.
T Consensus        83 -~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dl  135 (279)
T cd05111          83 -LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNL  135 (279)
T ss_pred             -cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecccc
Confidence             78999999999999999    35899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.78  E-value=2.6e-18  Score=147.98  Aligned_cols=120  Identities=17%  Similarity=0.328  Sum_probs=104.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC-----cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN-----ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||++.+...+     ..+|+|.+....    ...+.+|+.+++++.+|+||+++++++..++.
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~   90 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP   90 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence            468999999999999999999986443     789999987532    34578999999999449999999999988866


Q ss_pred             ceeEEEecCCCCCCHHhHc-------------------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY-------------------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l-------------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        +++||||+.+|+|.+++                   ..+++..+..++.||+.||.|||++||||.+.
T Consensus        91 --~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dl  158 (293)
T cd05053          91 --LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDL  158 (293)
T ss_pred             --eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence              99999999999999987                   24788899999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.78  E-value=2.8e-18  Score=147.98  Aligned_cols=117  Identities=27%  Similarity=0.437  Sum_probs=103.1

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.+....     .+.+.+|+++++.++ |+||+++++++.+...  .|+
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~l   78 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVRLQDVVHSEKR--LYL   78 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhcc-CCCEeeEEEEEecCCe--EEE
Confidence            57999999999999999999999899999999986422     356789999999999 9999999999998866  999


Q ss_pred             EecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||++ ++|.+++     ..+++..+..++.||+.||+|||++||+|++.
T Consensus        79 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl  128 (294)
T PLN00009         79 VFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDL  128 (294)
T ss_pred             EEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence            999996 5787777     23578889999999999999999999999843

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.78  E-value=1.7e-18  Score=148.86  Aligned_cols=120  Identities=22%  Similarity=0.331  Sum_probs=105.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-----CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-----TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||++.+..     ++..+|+|.+....    .+.+.+|+.+++.++ |+||+++++++.+...
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~-h~~iv~~~~~~~~~~~   82 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD-HPNIVKLLGVCAVGKP   82 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcC-CCchheEEEEEcCCCc
Confidence            5679999999999999999998743     57889999987532    456889999999999 9999999999988866


Q ss_pred             ceeEEEecCCCCCCHHhHcc-------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP-------------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~-------------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        .|+||||+++|+|.+++.                         .+++..+..++.||+.||+|||++||+|.+..
T Consensus        83 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~  157 (288)
T cd05050          83 --MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLA  157 (288)
T ss_pred             --cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence              999999999999999982                         26788889999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.78  E-value=3.4e-18  Score=148.59  Aligned_cols=118  Identities=23%  Similarity=0.374  Sum_probs=103.3

Q ss_pred             CeEEEeEeeecCceEEEEEEEcC--CCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVN--TNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~--~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      +|++.+.||+|+||.||+|.+..  ++..||+|.+....      .+.+.+|+.+++.++ |+||+++++++.+.....+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~   79 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK-HENVVSLVEVFLEHADKSV   79 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC-CCCccceEEEEeCCCCceE
Confidence            48899999999999999999988  79999999997622      456789999999999 9999999999998844559


Q ss_pred             EEEecCCCCCCHHhHc--------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY--------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l--------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||++ ++|.+++        ..+++..+..++.||+.||.|||++||+|.+.
T Consensus        80 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dl  134 (316)
T cd07842          80 YLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDL  134 (316)
T ss_pred             EEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCC
Confidence            99999997 4676665        25889999999999999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.78  E-value=4.5e-18  Score=142.63  Aligned_cols=119  Identities=24%  Similarity=0.387  Sum_probs=107.4

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|+..+.||+|++|.||+|.+..++..|++|++....     .+.+.+|+.++++++ |+||+++++.+.+...+.+++|
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv   79 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNIF   79 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEEE
Confidence            4788899999999999999998899999999997544     567899999999999 9999999999998722339999


Q ss_pred             ecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+++++|.+++   ..+++.++..++.|++.||+|||+.|++|.+.
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl  127 (260)
T cd06606          80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDI  127 (260)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            9999999999998   47899999999999999999999999999854

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.78  E-value=3.1e-18  Score=145.16  Aligned_cols=117  Identities=15%  Similarity=0.239  Sum_probs=103.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||++.+. .+..+|+|.+....  .+.+.+|+.+++.++ |+||+++++.+.+ ..  .+++|
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~-~~--~~~v~   79 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQ-HDKLVKLHAVVTK-EP--IYIIT   79 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcC-CCCcceEEEEEcC-CC--eEEEE
Confidence            578999999999999999999864 55679999987543  457889999999999 9999999999887 44  89999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+++|+|.+++     ..+++..+..++.||+.||.|||+.|++|.+.
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl  128 (260)
T cd05073          80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL  128 (260)
T ss_pred             EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence            999999999998     24788899999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.78  E-value=3.6e-18  Score=144.10  Aligned_cols=118  Identities=14%  Similarity=0.289  Sum_probs=105.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      ..+|++.+.||+|+||.||++.+. .+..+|+|.+....  ...+.+|+++++.++ |+||+++++++.....  .++||
T Consensus         3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~~v~   78 (256)
T cd05112           3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLS-HPKLVQLYGVCTERSP--ICLVF   78 (256)
T ss_pred             hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCC-CCCeeeEEEEEccCCc--eEEEE
Confidence            457899999999999999999885 46789999987533  467899999999999 9999999999988866  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+++|+|.+++    ..++++.+..++.|++.||+|||++||+|++.
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl  126 (256)
T cd05112          79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDL  126 (256)
T ss_pred             EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            999999999998    34899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.78  E-value=3.5e-19  Score=150.95  Aligned_cols=112  Identities=12%  Similarity=0.178  Sum_probs=97.5

Q ss_pred             eEeeecCceEEEEEEEcCCCc-------EEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          131 RKVGRGKYSEVFEGINVNTNE-------RCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~-------~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +.||+|+||.||+|.+..++.       .+|+|.+....   .+.+..|+.+++.++ |+||+++++++..+..  .++|
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~--~~lv   77 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLS-HKHLVLNYGVCVCGDE--SIMV   77 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCC-CCChhheeeEEEeCCC--cEEE
Confidence            368999999999999866544       38889886433   356788999999999 9999999999998766  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+++|+|.+++    ..+++..+..++.||+.||+|||++||+|++.
T Consensus        78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dl  126 (258)
T cd05078          78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNV  126 (258)
T ss_pred             EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            9999999999998    24899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.78  E-value=2.9e-18  Score=152.15  Aligned_cols=123  Identities=18%  Similarity=0.284  Sum_probs=106.0

Q ss_pred             cCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC-
Q 025443          121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS-  194 (252)
Q Consensus       121 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~-  194 (252)
                      +...++|++.+.||+|+||.||+|.+..+++.||||++...     ....+.+|+.++++++ |+||+++++++..... 
T Consensus        12 ~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~   90 (353)
T cd07850          12 FTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVN-HKNIIGLLNVFTPQKSL   90 (353)
T ss_pred             hhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcC-CCCCcceeeeeccCCCc
Confidence            34568899999999999999999999999999999998632     2356778999999999 9999999999875431 


Q ss_pred             ---ceeEEEecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 ---KTPSLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ---~~~~lV~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                         ...||||||++ ++|.+.+ ..+++..+..++.|++.||+|||++||+|.+.
T Consensus        91 ~~~~~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dl  144 (353)
T cd07850          91 EEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDL  144 (353)
T ss_pred             cccCcEEEEEeccC-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence               23799999997 5888877 55999999999999999999999999999854

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=4.8e-20  Score=161.65  Aligned_cols=120  Identities=22%  Similarity=0.327  Sum_probs=109.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ...|..++.||+|+||.||+|.+..+++.||||+++.+.    .+.+.+|+.+|..++ ++||.++|+.|..+..  +||
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~-~~~it~yygsyl~g~~--Lwi   88 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCD-SPNITEYYGSYLKGTK--LWI   88 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcC-cchHHhhhhheeeccc--HHH
Confidence            346777899999999999999999999999999997543    567889999999999 9999999999999977  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||.||++.+++   ..+.|..+..++++++.||.|||.++.+|-++-
T Consensus        89 iMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIK  138 (467)
T KOG0201|consen   89 IMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIK  138 (467)
T ss_pred             HHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceeccccc
Confidence            99999999999999   345999999999999999999999999997653

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.78  E-value=1.4e-18  Score=146.49  Aligned_cols=111  Identities=14%  Similarity=0.194  Sum_probs=97.8

Q ss_pred             eEeeecCceEEEEEEEcCCC----------cEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          131 RKVGRGKYSEVFEGINVNTN----------ERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~----------~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      +.||+|+||.||+|.+..++          ..+++|.+....  ...+.+|+.+++.++ |+||+++++++.. ..  .+
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~--~~   76 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLS-HKHLVKLYGVCVR-DE--NI   76 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCC-CcchhheeeEEec-CC--cE
Confidence            36899999999999998776          458888876543  567889999999999 9999999999888 44  79


Q ss_pred             EEecCCCCCCHHhHc---c-CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---P-TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~-~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||+++|+|.+++   . .+++..+..++.||+.||+|||++||+|++.
T Consensus        77 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl  127 (259)
T cd05037          77 MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNV  127 (259)
T ss_pred             EEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccC
Confidence            999999999999998   2 5899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.78  E-value=2.4e-18  Score=150.18  Aligned_cols=120  Identities=15%  Similarity=0.252  Sum_probs=103.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-------CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-------TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      .++|.+.+.||+|+||.||++.+..       ....+|+|.++...    ...+.+|+.+++.+.+|+||+++++++.+.
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            4789999999999999999998632       34579999987432    346789999999995599999999999887


Q ss_pred             CCceeEEEecCCCCCCHHhHcc-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLYP-------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l~-------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +.  +|+||||+.+|+|.+++.                   .+++.++..++.||+.||.|||++||+|++.
T Consensus        91 ~~--~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dl  160 (314)
T cd05099          91 GP--LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDL  160 (314)
T ss_pred             Cc--eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccc
Confidence            65  999999999999999981                   2788899999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.78  E-value=2.4e-18  Score=147.29  Aligned_cols=110  Identities=17%  Similarity=0.209  Sum_probs=99.0

Q ss_pred             eeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          133 VGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       133 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      ||+|+||+||+|.+..+|+.||+|.+....      ...+.+|+++++.++ |+||+++++.+...+.  +|+||||++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~lv~e~~~~   77 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDD--LCLVMTLMNG   77 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCe--EEEEEecCCC
Confidence            699999999999999999999999996422      345678999999999 9999999999988865  9999999999


Q ss_pred             CCHHhHc---c--CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          207 TDFKVLY---P--TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       207 g~L~~~l---~--~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++|.+++   .  .+++.++..++.|++.||.|||++||+|.+.
T Consensus        78 ~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di  121 (277)
T cd05577          78 GDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDL  121 (277)
T ss_pred             CcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            9999988   2  6899999999999999999999999999854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.78  E-value=2.3e-18  Score=149.10  Aligned_cols=119  Identities=18%  Similarity=0.282  Sum_probs=103.4

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCc--EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNE--RCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~--~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ++|++.+.||+|+||.||+|.+..++.  .+++|.++..    ..+.+.+|+.++.++.+|+||+++++++.+.+.  +|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--~~   79 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGY--LY   79 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCc--ce
Confidence            578999999999999999999877764  4788888642    235688999999999449999999999988866  99


Q ss_pred             EEecCCCCCCHHhHcc-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLYP-------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l~-------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||+++|+|.+++.                   .+++..++.++.||+.||+|||++||||.+.
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dl  145 (297)
T cd05089          80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDL  145 (297)
T ss_pred             EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcC
Confidence            9999999999999981                   3788999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.78  E-value=3e-18  Score=147.57  Aligned_cols=119  Identities=20%  Similarity=0.298  Sum_probs=104.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      ..+|.+.+.||+|+||+||++...     .++..+|+|.+....   .+.+.+|+.++++++ |+||+++++++...+. 
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~-   81 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEGDP-   81 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCc-
Confidence            467999999999999999999852     345679999986533   456889999999999 9999999999998866 


Q ss_pred             eeEEEecCCCCCCHHhHcc----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLYP----------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l~----------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       +++||||+++|+|.+++.                .+++..+..++.||+.||+|||++||+|.+.
T Consensus        82 -~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dl  146 (288)
T cd05093          82 -LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDL  146 (288)
T ss_pred             -cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccc
Confidence             999999999999999881                3899999999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.78  E-value=4.7e-18  Score=147.18  Aligned_cols=120  Identities=28%  Similarity=0.354  Sum_probs=103.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC----
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS----  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~----  194 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||||.+....     ...+.+|+.++++++ |+||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~   89 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKATPYNR   89 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCC-CCCccceEEEEecccccccC
Confidence            578999999999999999999999999999999986422     234678999999999 9999999999876532    


Q ss_pred             --ceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 --KTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 --~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        ...++||||+. ++|.+++    ..+++.++..++.||+.||+|||++||+|++.
T Consensus        90 ~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl  145 (310)
T cd07865          90 YKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDM  145 (310)
T ss_pred             CCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence              24699999997 5888877    26899999999999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.78  E-value=2.9e-18  Score=145.42  Aligned_cols=110  Identities=17%  Similarity=0.281  Sum_probs=95.7

Q ss_pred             EeeecCceEEEEEEEc--CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCC
Q 025443          132 KVGRGKYSEVFEGINV--NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN  205 (252)
Q Consensus       132 ~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~  205 (252)
                      .||+|+||.||+|.+.  .++..||+|++....    .+.+.+|+.++++++ |+||+++++++..+ .  .++||||++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~~-~--~~lv~e~~~   77 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLD-NPYIVRMIGVCEAE-A--LMLVMEMAS   77 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcC-CCCeEEEEEEEcCC-C--eEEEEEeCC
Confidence            4899999999999875  445679999996543    356889999999999 99999999988643 3  899999999


Q ss_pred             CCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          206 STDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       206 gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|+|.+++    ..+++.++..++.||+.||.|||++||+|.+.
T Consensus        78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  121 (257)
T cd05115          78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDL  121 (257)
T ss_pred             CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeeccc
Confidence            99999998    35899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.78  E-value=2.3e-18  Score=146.63  Aligned_cols=112  Identities=16%  Similarity=0.180  Sum_probs=95.7

Q ss_pred             eEeeecCceEEEEEEEc--CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINV--NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||+|...  .++..+|+|.++...    ...+.+|+.+++.++ |+||+++++++.+...  +++||||+
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~lv~e~~   77 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQ-HSNLLQCLGQCTEVTP--YLLVMEFC   77 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCC--cEEEEECC
Confidence            36899999999999864  345679999987532    346888999999999 9999999999988866  99999999


Q ss_pred             CCCCHHhHcc--------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLYP--------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l~--------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++|+|.+++.        .+++..++.++.|++.||+|||++||+|.+.
T Consensus        78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl  126 (269)
T cd05087          78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDL  126 (269)
T ss_pred             CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEecccc
Confidence            9999999981        3466788899999999999999999999853

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.78  E-value=3.8e-18  Score=144.16  Aligned_cols=118  Identities=14%  Similarity=0.258  Sum_probs=102.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .++|++.+.||+|+||.||++..  .|..+|+|.++... .+.+.+|+.+++.++ |+||+++++++...+ ...++|||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~-~~~~lv~e   80 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEK-GGLYIVTE   80 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCchHHHHHHHHHHHHhCC-CCCeeeEEEEEEcCC-CceEEEEE
Confidence            46899999999999999999987  57889999987543 457889999999999 999999999765443 23899999


Q ss_pred             CCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+++|+|.+++     ..+++..+..++.||+.||+|||++||+|.+.
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  128 (256)
T cd05082          81 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDL  128 (256)
T ss_pred             CCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEecccc
Confidence            99999999998     23789999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.78  E-value=2e-18  Score=145.70  Aligned_cols=116  Identities=14%  Similarity=0.231  Sum_probs=102.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .++|++.+.||+|+||.||++..  +++.||+|.++.. ..+.+.+|+.+++.++ |+||+++++++..++   .++|||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~---~~~v~e   78 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLH-HKNLVRLLGVILHNG---LYIVME   78 (254)
T ss_pred             HHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCC-CCCcCeEEEEEcCCC---cEEEEE
Confidence            46799999999999999999875  7888999999754 3457889999999999 999999999987653   799999


Q ss_pred             CCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+.+|+|.+++     ..+++..+..++.|++.||.|||+.|++|++.
T Consensus        79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl  126 (254)
T cd05083          79 LMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDL  126 (254)
T ss_pred             CCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence            99999999998     24789999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.78  E-value=4.4e-18  Score=149.97  Aligned_cols=120  Identities=24%  Similarity=0.395  Sum_probs=104.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC---ce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS---KT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~---~~  196 (252)
                      .++|++.+.||+|+||.||+|.+..+|..||+|.+...    ....+.+|+.+++.++ |+||+++++++.....   ..
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~   82 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFESFND   82 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCC-CCCcCchhheeecccccccce
Confidence            57899999999999999999999999999999998642    2355788999999999 9999999998765431   24


Q ss_pred             eEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|+||||++ ++|.+++  +.+++..+..++.||+.||.|||++||||.+.
T Consensus        83 ~~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dl  132 (336)
T cd07849          83 VYIVQELME-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDL  132 (336)
T ss_pred             EEEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            899999997 5888887  57999999999999999999999999999853

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.78  E-value=3.2e-18  Score=145.72  Aligned_cols=118  Identities=18%  Similarity=0.345  Sum_probs=102.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC---CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT---NERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|.+.+.||+|+||.||+|.+...   ...||||......    .+.+.+|+.+++.++ |+||+++++++.+..   
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~---   80 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFD-HPHIVKLIGVITENP---   80 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCC-CCchhceeEEEcCCC---
Confidence            45789999999999999999998654   3468999986432    456889999999999 999999999987643   


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .|+||||+++|+|.+++    ..+++..+..++.|++.||+|||++|++|++.
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl  133 (270)
T cd05056          81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDI  133 (270)
T ss_pred             cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence            78999999999999998    24899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.78  E-value=1.1e-18  Score=151.02  Aligned_cols=118  Identities=14%  Similarity=0.196  Sum_probs=105.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      +.|.....||+|+||.||++.+..++..||||.+....   .+.+.+|+.+++.++ |+||+++++.+..++.  .|+||
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~--~~lv~   98 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH-HENVVDMYNSYLVGDE--LWVVM   98 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCC-CCcHHHHHHheecCCe--EEEEE
Confidence            45555678999999999999998899999999986432   456889999999999 9999999999988866  99999


Q ss_pred             cCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+++++|.+++  +.+++.++..++.||+.||+|||++||||.+.
T Consensus        99 e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dl  144 (292)
T cd06658          99 EFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDI  144 (292)
T ss_pred             eCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence            999999999998  67899999999999999999999999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.78  E-value=4.4e-18  Score=150.68  Aligned_cols=123  Identities=23%  Similarity=0.398  Sum_probs=106.5

Q ss_pred             cCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCC--
Q 025443          121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQH--  193 (252)
Q Consensus       121 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~--  193 (252)
                      |...++|.+.+.||+|+||.||++.+..++..||+|++....     .+.+.+|+.++++++ |+||+++++++....  
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~~iv~~~~~~~~~~~~   91 (345)
T cd07877          13 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL   91 (345)
T ss_pred             hhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcC-CCcccceeeeeeecccc
Confidence            455789999999999999999999999999999999986432     356788999999999 999999999886432  


Q ss_pred             --CceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          194 --SKTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       194 --~~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        ...+|+++|++ |++|.+++  ..+++..+..++.||++||+|||++||+|.+.
T Consensus        92 ~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dl  146 (345)
T cd07877          92 EEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDL  146 (345)
T ss_pred             cccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence              12378999988 68999888  56999999999999999999999999999854

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.78  E-value=5.2e-18  Score=149.28  Aligned_cols=121  Identities=23%  Similarity=0.308  Sum_probs=105.9

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ...++|++.+.||.|+||.||++.+..+++.||+|++...     ..+.+.+|+++++.++ |+||+++++++...+ ..
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~-~~   84 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLR-HENIISLSDIFISPL-ED   84 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcC-CCCeeeEeeeEecCC-Cc
Confidence            3468899999999999999999999999999999988532     2456789999999999 999999999987643 23


Q ss_pred             eEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|+||||+ +++|..++  ..+++..+..++.||+.||.|||++||+|.+.
T Consensus        85 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl  134 (328)
T cd07856          85 IYFVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDL  134 (328)
T ss_pred             EEEEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            89999999 47999888  57889999999999999999999999999853

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.78  E-value=2.4e-18  Score=148.27  Aligned_cols=117  Identities=18%  Similarity=0.303  Sum_probs=101.3

Q ss_pred             CeEEEeEeeecCceEEEEEEEcC-----CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVN-----TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      +|++.+.||+|+||.||+|.+..     ....+|+|.+....    .+.+.+|+.+++.++ |+||+++++.+...+.  
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--   77 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN-HPHVIKLYGACSQDGP--   77 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCC--
Confidence            47888999999999999998753     23578999886432    356889999999999 9999999999988876  


Q ss_pred             eEEEecCCCCCCHHhHcc---------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLYP---------------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l~---------------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .++||||+.+|+|.+++.                           .+++..+..++.|++.||+|||++||||++.
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~di  153 (290)
T cd05045          78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDL  153 (290)
T ss_pred             cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhh
Confidence            999999999999999861                           3678889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.78  E-value=9.9e-18  Score=151.07  Aligned_cols=116  Identities=16%  Similarity=0.206  Sum_probs=102.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc--CCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV--NTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      ..+|++++.||+|+||.||+|...  .++..||+|.+...  +...+|+++|+.++ |+|||++++++.+...  +|+||
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~--~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--KTPGREIDILKTIS-HRAIINLIHAYRWKST--VCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--ccHHHHHHHHHhcC-CCCccceeeeEeeCCE--EEEEe
Confidence            467999999999999999999764  35678999998653  34568999999999 9999999999998865  99999


Q ss_pred             cCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |++. ++|.+++   ..+++.++..|+.||+.||.|||++||||.+.
T Consensus       166 e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDl  211 (392)
T PHA03207        166 PKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDV  211 (392)
T ss_pred             hhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            9996 7888887   56899999999999999999999999999853

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.78  E-value=2.9e-18  Score=148.79  Aligned_cols=121  Identities=15%  Similarity=0.253  Sum_probs=103.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-------CCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-------NTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      .++|.+.+.||+|+||.||+|...       ..+..+|+|.+...    ..+.+.+|+.+++.+.+|+||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            578999999999999999999753       23457999998643    2456889999999994499999999999988


Q ss_pred             CCceeEEEecCCCCCCHHhHcc-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLYP-------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l~-------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ..  +|+||||+.+|+|.+++.                   .+++.++..++.||+.||.|||++||||.+..
T Consensus        94 ~~--~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlk  164 (304)
T cd05101          94 GP--LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA  164 (304)
T ss_pred             Cc--eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence            66  999999999999999981                   26778899999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.77  E-value=3.1e-18  Score=151.38  Aligned_cols=120  Identities=23%  Similarity=0.383  Sum_probs=105.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC------
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS------  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~------  194 (252)
                      ..+|.+.+.||.|+||.||+|.+..++..||+|.+....   .+.+.+|+++++.++ |+||+++++++.+...      
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~~   82 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLD-HDNIVKVYEVLGPSGSDLTEDV   82 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcC-CCcchhhHhhhccccccccccc
Confidence            578999999999999999999999999999999986532   456889999999998 9999999988765431      


Q ss_pred             ------ceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 ------KTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ------~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                            ...|+||||++ ++|.+++  +.+++..++.++.||+.||.|||++||||.+.
T Consensus        83 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~di  140 (342)
T cd07854          83 GSLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDL  140 (342)
T ss_pred             ccccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence                  23799999997 6998888  57999999999999999999999999999744

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.77  E-value=3.1e-18  Score=144.96  Aligned_cols=110  Identities=21%  Similarity=0.321  Sum_probs=96.5

Q ss_pred             EeeecCceEEEEEEE--cCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          132 KVGRGKYSEVFEGIN--VNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       132 ~lG~G~fg~V~~~~~--~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +||+|+||.||+|.+  ..++..+|+|+++...     .+.+.+|+.+++.++ |+||+++++++... .  .++||||+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~-~--~~lv~e~~   77 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLD-NPYIVRMIGICEAE-S--WMLVMELA   77 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCC-CCCcceEEEEEcCC-C--cEEEEecC
Confidence            589999999999965  4567899999986432     456889999999999 99999999988644 3  79999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++|+|.+++   +.+++..+..++.|++.||+|||++||+|.+.
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl  121 (257)
T cd05116          78 ELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDL  121 (257)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccc
Confidence            999999998   56899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.77  E-value=2.2e-18  Score=151.33  Aligned_cols=111  Identities=13%  Similarity=0.183  Sum_probs=98.9

Q ss_pred             Eeeec--CceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          132 KVGRG--KYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       132 ~lG~G--~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      .||+|  +||+||++.+..+|+.||+|++....     .+.+.+|+.+++.++ |+||++++++|..++.  +|+||||+
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~~~--~~~v~e~~   81 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFR-HPNIMTSWTVFTTGSW--LWVISPFM   81 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCcceEeeeEecCCc--eEEEEecc
Confidence            46666  99999999999999999999986432     356889999999999 9999999999999876  99999999


Q ss_pred             CCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .+|+|.+++     ..+++..+..++.||+.||+|||++||||.+.
T Consensus        82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDl  127 (328)
T cd08226          82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNI  127 (328)
T ss_pred             cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            999999998     24889999999999999999999999999854

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=6.3e-18  Score=141.88  Aligned_cols=118  Identities=25%  Similarity=0.457  Sum_probs=107.2

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|++.+.||+|+||.||++.+..+++.+++|.+....     .+.+.+|++++.+++ |+|++++++++.+.+.  .++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~~v   77 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK-HPNIVKYIGSIETSDS--LYII   77 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCC-CCCccEEEEEEEeCCE--EEEE
Confidence            5888999999999999999998899999999996543     457889999999999 9999999999988755  9999


Q ss_pred             ecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||+++++|.+++   ..+++..+..++.|++.||.|||++||+|.+.+
T Consensus        78 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  126 (254)
T cd06627          78 LEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIK  126 (254)
T ss_pred             EecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence            9999999999998   568999999999999999999999999998543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.77  E-value=4e-18  Score=144.87  Aligned_cols=119  Identities=16%  Similarity=0.277  Sum_probs=100.9

Q ss_pred             eEEEeEeeecCceEEEEEEEcCC---CcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC----
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNT---NERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS----  194 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~----  194 (252)
                      |++.+.||+|+||.||+|....+   +..||+|+++...     ...+.+|+++++.++ |+||+++++++.....    
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~   79 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFD-HPNVMKLIGVCFEASSLQKI   79 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCC-CCCeeeEEeeeccCCccccC
Confidence            56778999999999999997654   4789999987432     356889999999999 9999999998865432    


Q ss_pred             ceeEEEecCCCCCCHHhHc---------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ...++||||+++|+|..++         ..+++..+..++.|++.||+|||++||+|.+..
T Consensus        80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlk  140 (273)
T cd05035          80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLA  140 (273)
T ss_pred             cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence            2379999999999999887         258999999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.77  E-value=4.1e-18  Score=147.26  Aligned_cols=119  Identities=25%  Similarity=0.434  Sum_probs=103.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCC-----
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQH-----  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~-----  193 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||+|+++...     ...+.+|+++++.++ |+||+++++++.+..     
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~-h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLN-HRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCC-CCCeeeeeheecCcchhhhc
Confidence            578999999999999999999999999999999996432     345778999999999 999999999987654     


Q ss_pred             ---CceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          194 ---SKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       194 ---~~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                         ...+||||||+++ +|.+++    ..+++..+..++.||+.||.|||+.||+|..
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~d  141 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRD  141 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence               1249999999985 676666    3589999999999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.77  E-value=3.1e-18  Score=150.67  Aligned_cols=118  Identities=19%  Similarity=0.347  Sum_probs=103.6

Q ss_pred             CCCeEE-EeEeeecCceEEEEEEEcCCCcEEEEEEeeccch-----------------HHHHHHHHHHHhcCCCCcceee
Q 025443          124 QDDYEV-VRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK-----------------KKIKREIKILQNLCGGPNVVKL  185 (252)
Q Consensus       124 ~~~y~~-~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-----------------~~~~~Ei~il~~l~~h~nIv~l  185 (252)
                      .++|.. .+.||+|+||.||+|.+..+++.||+|.++....                 ..+.+|+++++.++ |+||+++
T Consensus         7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~   85 (335)
T PTZ00024          7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK-HENIMGL   85 (335)
T ss_pred             ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC-Ccceeee
Confidence            466764 4679999999999999999999999999864321                 14679999999999 9999999


Q ss_pred             eeEEEcCCCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          186 LDIVRDQHSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       186 ~~~~~~~~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++++...+.  .|+||||++ |+|.+++   ..+++..+..++.||+.||+|||++||+|++.
T Consensus        86 ~~~~~~~~~--~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl  145 (335)
T PTZ00024         86 VDVYVEGDF--INLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDL  145 (335)
T ss_pred             eEEEecCCc--EEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence            999998866  999999997 6899888   46899999999999999999999999999854

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.77  E-value=4.9e-18  Score=147.66  Aligned_cols=118  Identities=20%  Similarity=0.287  Sum_probs=104.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..+|+..+.||+|+||.||+|.+..+++.||+|.+....      .+.+.+|+++++.++ |+||+++++++.+++.  .
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~--~   90 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR-HPNTIEYKGCYLREHT--A   90 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEEeCCe--E
Confidence            467999999999999999999998899999999986321      346889999999999 9999999999998866  9


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||+. |+|.+++    +.+++.++..++.||+.||.|||++||+|.+.
T Consensus        91 ~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl  141 (307)
T cd06607          91 WLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDI  141 (307)
T ss_pred             EEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence            99999997 5776665    46899999999999999999999999999854

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.77  E-value=1.9e-18  Score=147.72  Aligned_cols=119  Identities=24%  Similarity=0.367  Sum_probs=104.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-----CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-----TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|.+.+.||+|+||.||+|.+..     ++..||+|.++...    .+.+.+|+++|+.++ |+||+++++++.....
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~   82 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ-HENIVKFYGVCTEGDP   82 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcC-CCCchheeeEEecCCC
Confidence            4578899999999999999998753     35789999996532    457889999999999 9999999999998866


Q ss_pred             ceeEEEecCCCCCCHHhHcc-----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP-----------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~-----------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        .++||||++||+|.+++.                 .+++..+..++.||+.||.|||++||+|.+.
T Consensus        83 --~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dl  148 (280)
T cd05049          83 --PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDL  148 (280)
T ss_pred             --eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecccc
Confidence              999999999999999981                 2678899999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.77  E-value=3.7e-18  Score=150.30  Aligned_cols=120  Identities=14%  Similarity=0.233  Sum_probs=102.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC-------CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT-------NERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~-------~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      ..+|++++.||+|+||.||+|.+...       +..+|+|.++...    .+.+.+|+.+++++.+|+||+++++++...
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   90 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence            35799999999999999999986432       2368999886432    457889999999994499999999999888


Q ss_pred             CCceeEEEecCCCCCCHHhHcc-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLYP-------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l~-------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +.  +++||||+.+|+|.+++.                   .+++.++..++.||+.||.|||++||||.+.
T Consensus        91 ~~--~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dl  160 (334)
T cd05100          91 GP--LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDL  160 (334)
T ss_pred             Cc--eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence            66  999999999999999981                   2677888999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.77  E-value=3.2e-18  Score=145.64  Aligned_cols=112  Identities=16%  Similarity=0.217  Sum_probs=95.8

Q ss_pred             eEeeecCceEEEEEEEcC------------CCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          131 RKVGRGKYSEVFEGINVN------------TNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~------------~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      +.||+|+||.||+|....            ....+++|.+....   ...+..|+.+++.++ ||||+++++++.++.. 
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~-hp~iv~~~~~~~~~~~-   78 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS-HKHIVLLYGVCVRDVE-   78 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCC-
Confidence            368999999999998532            23368999886533   346788999999999 9999999999988765 


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       .++||||+++|+|..++    ..+++..+..++.||+.||+|||++||||.+.
T Consensus        79 -~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dl  131 (262)
T cd05077          79 -NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNV  131 (262)
T ss_pred             -CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCC
Confidence             89999999999999888    35899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.77  E-value=4.6e-18  Score=146.09  Aligned_cols=120  Identities=21%  Similarity=0.303  Sum_probs=109.8

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ..+.|++.+.||+|+||.||++.+..++..+++|+++...  .+.+.+|+++++.++ |+||+++++.+.....  .|+|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~lv   93 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCK-HPNIVDYYDSYLVGDE--LWVV   93 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCC-CCCeeEEEEEEEECCE--EEEE
Confidence            4677999999999999999999998889999999997654  567889999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc---c-CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY---P-TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l---~-~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||++|++|.+++   . .+++..+..++.|++.||.|||+.||+|...
T Consensus        94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl  142 (286)
T cd06614          94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDI  142 (286)
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence            9999999999999   2 7999999999999999999999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.77  E-value=5.2e-18  Score=143.72  Aligned_cols=110  Identities=19%  Similarity=0.280  Sum_probs=99.9

Q ss_pred             eeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          133 VGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       133 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      ||.|+||.||+|.+..++..+|+|++...      ..+.+.+|+.+++.++ |+||+++++.+.++..  +|+||||++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~e~~~~   77 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLYRTFKDKKY--IYMLMEYCLG   77 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC-CCCEeeeeeeEEcCCc--cEEEEecCCC
Confidence            69999999999999888999999999642      2456889999999998 9999999999988866  9999999999


Q ss_pred             CCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          207 TDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       207 g~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++|.+++   ..+++..+..++.||+.||+|||++|++|...
T Consensus        78 ~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl  119 (262)
T cd05572          78 GELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDL  119 (262)
T ss_pred             CcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Confidence            9999998   46899999999999999999999999999743

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.77  E-value=4.3e-18  Score=145.34  Aligned_cols=116  Identities=22%  Similarity=0.285  Sum_probs=96.6

Q ss_pred             CCeEEEeEe--eecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          125 DDYEVVRKV--GRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       125 ~~y~~~~~l--G~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      ++|++.+.+  |+|+||.||++.++.++..+|+|.+.......  .|+.+...+.+|+||+++++.+...+.  +|+|||
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~e~~~~~~~~~h~~iv~~~~~~~~~~~--~~iv~e   89 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--IEPMVHQLMKDNPNFIKLYYSVTTLKG--HVLIMD   89 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--hhHHHHHHhhcCCCEEEEEEEEecCCe--eEEEEE
Confidence            455665555  99999999999999999999999997543222  233333333349999999999998865  999999


Q ss_pred             CCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          203 YVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       203 ~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |++||+|.+++   ..+++.+++.++.||+.||.|||+.||+|++
T Consensus        90 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  134 (267)
T PHA03390         90 YIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHND  134 (267)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence            99999999998   4689999999999999999999999999974

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.77  E-value=5e-18  Score=145.98  Aligned_cols=118  Identities=22%  Similarity=0.388  Sum_probs=103.5

Q ss_pred             CeEEEeEeeecCceEEEEEEEc---CCCcEEEEEEeeccc-------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          126 DYEVVRKVGRGKYSEVFEGINV---NTNERCIIKILKPVK-------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~~-------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      +|++.+.||+|+||.||++.+.   .++..||||+++...       .+.+.+|+.++.++++|+||+.+++.+..+.. 
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~-   79 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTK-   79 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCE-
Confidence            4888999999999999999864   467889999986421       34578999999999669999999999988765 


Q ss_pred             eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       +||||||+.||+|.+++   ..+++..++.++.|+++||+|||+.|++|.+.
T Consensus        80 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl  131 (288)
T cd05583          80 -LHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDI  131 (288)
T ss_pred             -EEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence             99999999999999998   46899999999999999999999999999854

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.77  E-value=1.8e-18  Score=152.89  Aligned_cols=121  Identities=21%  Similarity=0.297  Sum_probs=102.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-----CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-----TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+..     +++.||+|+++...    .+.+.+|+.++.++.+|+||+++++++...+ 
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~-   84 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG-   84 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC-
Confidence            4689999999999999999997543     45789999986432    3467789999999944999999999887654 


Q ss_pred             ceeEEEecCCCCCCHHhHcc------------------------------------------------------------
Q 025443          195 KTPSLIFEYVNSTDFKVLYP------------------------------------------------------------  214 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~------------------------------------------------------------  214 (252)
                      ..++++|||+++|+|.+++.                                                            
T Consensus        85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (337)
T cd05054          85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE  164 (337)
T ss_pred             CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence            34899999999999998871                                                            


Q ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          215 ----TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       215 ----~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                          .+++..+..++.||+.||+|||++||+|.+.
T Consensus       165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDi  199 (337)
T cd05054         165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDL  199 (337)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence                4688899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.77  E-value=3.7e-18  Score=143.58  Aligned_cols=115  Identities=22%  Similarity=0.355  Sum_probs=103.1

Q ss_pred             EEEeEeeecCceEEEEEEEcCCC----cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          128 EVVRKVGRGKYSEVFEGINVNTN----ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       128 ~~~~~lG~G~fg~V~~~~~~~~~----~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++.+.||.|+||.||++.+...+    ..||+|.++...    .+.+.+|+.+++.++ |+||+++++++.+.+.  .++
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~~   78 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLD-HPNIVKLLGVCTEEEP--LMI   78 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcC-CCchheEEEEEcCCCe--eEE
Confidence            46689999999999999998766    889999997543    457889999999998 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc---cC--CCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PT--LTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~--l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|||+++++|.+++   ..  +++..+..++.|++.||.|||++||+|.+.
T Consensus        79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl  129 (258)
T smart00219       79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDL  129 (258)
T ss_pred             EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeeccc
Confidence            99999999999998   22  899999999999999999999999999854

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.77  E-value=2e-18  Score=149.66  Aligned_cols=118  Identities=13%  Similarity=0.163  Sum_probs=105.0

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      ..|.....||+|+||.||++.+..++..||+|.+...   ..+.+.+|+.++..++ |+||+++++++...+.  .|+||
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~--~~iv~   97 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ-HQNVVEMYKSYLVGEE--LWVLM   97 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCC-CCchhhhhhheeeCCe--EEEEE
Confidence            4455566899999999999999889999999998642   2456889999999999 9999999999998865  99999


Q ss_pred             cCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+++++|..++  ..+++.++..++.|++.||.|||++||+|.+.
T Consensus        98 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl  143 (297)
T cd06659          98 EFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDI  143 (297)
T ss_pred             ecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            999999999988  56899999999999999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=5.4e-18  Score=143.44  Aligned_cols=113  Identities=21%  Similarity=0.261  Sum_probs=96.6

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +.||+|+||.||+|.+..+++.||+|+++...      ...+..|..++....+|+||+++++++...+.  +|+||||+
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~--~~lv~e~~   79 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDY--LYLVMEYL   79 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCe--EEEEEecc
Confidence            57999999999999999999999999996532      22345565555544349999999999998765  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|++|.+++   +.+++..+..++.||+.||.|||+.||+|.+.
T Consensus        80 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl  123 (260)
T cd05611          80 NGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDI  123 (260)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            999999998   56899999999999999999999999999853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.77  E-value=7.8e-18  Score=143.87  Aligned_cols=118  Identities=26%  Similarity=0.459  Sum_probs=101.1

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      |++.+.||+|+||.||+|.+..++..+|+|+++...    .....+|+.++.++.+|+||+++++++.++..+.+++|||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            678899999999999999999999999999986431    2234579999999977999999999999873344999999


Q ss_pred             CCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |++ |+|.+.+    ..+++.++..++.||+.||+|||++||+|.+.
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl  126 (282)
T cd07831          81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDI  126 (282)
T ss_pred             cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccc
Confidence            997 5777777    35899999999999999999999999999743

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.77  E-value=4.5e-18  Score=147.73  Aligned_cols=118  Identities=19%  Similarity=0.248  Sum_probs=102.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc----EEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE----RCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|+..+.||+|+||.||+|.+..+|.    .+|+|.+....    ...+.+|+.+++.++ |+||+++++++....  
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~~--   82 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD-HPHLVRLLGVCLSPT--   82 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCcccEEEEEcCCC--
Confidence            5678999999999999999999877775    57999886543    236789999999999 999999999987653  


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       .++++||+.+|+|.+++    ..+++..+..++.|++.||+|||++||+|++.
T Consensus        83 -~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~di  135 (303)
T cd05110          83 -IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDL  135 (303)
T ss_pred             -ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeecccc
Confidence             68999999999999998    25889999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.77  E-value=7.4e-18  Score=146.76  Aligned_cols=114  Identities=21%  Similarity=0.331  Sum_probs=96.6

Q ss_pred             EeEeeecCceEEEEEEEcC--CCcEEEEEEeeccc-hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          130 VRKVGRGKYSEVFEGINVN--TNERCIIKILKPVK-KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~--~~~~vAvK~i~~~~-~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      ..+||+|+||.||+|.+..  ++..||+|.++... ...+.+|+.+++.++ |+||+++++++.......+|+||||++ 
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~e~~~-   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELK-HPNVIALQKVFLSHSDRKVWLLFDYAE-   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCC-CCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence            3689999999999999754  56889999997543 456789999999999 999999999997655456999999997 


Q ss_pred             CCHHhHc------------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          207 TDFKVLY------------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       207 g~L~~~l------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++|.+++            ..+++..++.++.||+.||.|||++||||++.
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dl  134 (317)
T cd07867          84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDL  134 (317)
T ss_pred             CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCC
Confidence            5777765            14789999999999999999999999999854

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.77  E-value=2.2e-18  Score=146.02  Aligned_cols=118  Identities=18%  Similarity=0.256  Sum_probs=106.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ++|++.+.||+|+||.||++.+..+++.+|+|++....    .+.+.+|++++++++ |+||+++++.+...+.  ++||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~--~~lv   77 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGD--ISIC   77 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCE--EEEE
Confidence            36788899999999999999999999999999986542    356889999999999 9999999999988865  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      |||+++++|.+++    ..+++..+..++.|++.||+|||+ .||+|.+.
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl  127 (265)
T cd06605          78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDV  127 (265)
T ss_pred             EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCC
Confidence            9999999999998    467999999999999999999999 99999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.77  E-value=6.9e-18  Score=141.88  Aligned_cols=111  Identities=22%  Similarity=0.323  Sum_probs=98.3

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      +.||+|+||.||+|.. .++..+|+|+++...    ...+.+|+++++.++ |+||+++++++...+.  .++||||+++
T Consensus         1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~e~~~~   76 (250)
T cd05085           1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYD-HPNIVKLIGVCTQRQP--IYIVMELVPG   76 (250)
T ss_pred             CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCC-CCCcCeEEEEEecCCc--cEEEEECCCC
Confidence            3689999999999986 468899999986532    346789999999998 9999999999988866  9999999999


Q ss_pred             CCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          207 TDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       207 g~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+|.+++    ..+++..+..++.|++.||.|||++|++|++.
T Consensus        77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl  119 (250)
T cd05085          77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDL  119 (250)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccc
Confidence            9999988    35789999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.77  E-value=3.2e-18  Score=144.43  Aligned_cols=111  Identities=23%  Similarity=0.338  Sum_probs=100.3

Q ss_pred             eeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          133 VGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       133 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      ||+|+||.||++++..+|+.+++|++....      .+.+.+|++++++++ |+||+++++.+.....  .|+||||++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~--~~lv~e~~~~   77 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKN--LYLVMEYLPG   77 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcE--EEEEEecCCC
Confidence            689999999999998889999999996532      456889999999999 9999999999988765  9999999999


Q ss_pred             CCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          207 TDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       207 g~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ++|.+++   +.+++..+..++.||+.||.|||++||+|.+.+
T Consensus        78 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~  120 (265)
T cd05579          78 GDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLK  120 (265)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCC
Confidence            9999998   568999999999999999999999999998543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=4.6e-20  Score=168.05  Aligned_cols=119  Identities=19%  Similarity=0.341  Sum_probs=108.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ..+.|.++..||.|+||+||+|.++.++...|-|+|...   ..+.+.-||+||..|. ||+||+|++.|...+.  +||
T Consensus        30 P~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~Cd-HP~ivkLl~ayy~enk--Lwi  106 (1187)
T KOG0579|consen   30 PRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECD-HPVIVKLLSAYYFENK--LWI  106 (1187)
T ss_pred             HHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCC-ChHHHHHHHHHhccCc--eEE
Confidence            356688889999999999999999999999999999643   3567889999999999 9999999999888876  999


Q ss_pred             EecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          200 IFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       200 V~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ..|||.||-...++    ..+.+++++.+++|+|.||.|||+++|+|-+
T Consensus       107 liEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRD  155 (1187)
T KOG0579|consen  107 LIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRD  155 (1187)
T ss_pred             EEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhh
Confidence            99999999999887    6799999999999999999999999999863

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.76  E-value=7e-18  Score=143.55  Aligned_cols=117  Identities=15%  Similarity=0.285  Sum_probs=97.9

Q ss_pred             EEEeEeeecCceEEEEEEEcCCCc--EEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC----Cce
Q 025443          128 EVVRKVGRGKYSEVFEGINVNTNE--RCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH----SKT  196 (252)
Q Consensus       128 ~~~~~lG~G~fg~V~~~~~~~~~~--~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~----~~~  196 (252)
                      .+.+.||+|+||.||+|.+..++.  .+|+|.++..     ..+.+.+|+.+++.++ |+||+++++.+....    ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFD-HPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEccCCcccCCCC
Confidence            456889999999999999877765  6899998642     2456889999999999 999999999775321    123


Q ss_pred             eEEEecCCCCCCHHhHc---------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY---------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .++||||+.+|+|.+++         ..+++..+..++.||+.||+|||++||+|.+.
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  138 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDL  138 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence            79999999999999886         23789999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.76  E-value=1.2e-17  Score=140.09  Aligned_cols=117  Identities=16%  Similarity=0.352  Sum_probs=106.0

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|++.+.||.|+||.||++.+..++..||+|++...     ..+.+.+|+++++.++ |+|++++++.+.....  .++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~--~~lv   77 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGK--LCIV   77 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCE--EEEE
Confidence            588999999999999999999889999999999743     3467889999999999 9999999999988855  9999


Q ss_pred             ecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+++++|.+++       ..+++..+..++.|++.||.|||++|++|.+.
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl  129 (258)
T cd08215          78 MEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDI  129 (258)
T ss_pred             EEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccC
Confidence            9999999999988       34889999999999999999999999999843

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.76  E-value=3.3e-18  Score=165.38  Aligned_cols=119  Identities=21%  Similarity=0.389  Sum_probs=105.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc-----EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE-----RCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++-++.+.||+|+||.||.|.......     .||||.+++.    ....|.+|..+|+.++ |||||+++|++.+.+.
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~-HpNiv~liGv~l~~~~  769 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFD-HPNIVSLIGVCLDSGP  769 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCC-CcceeeEEEeecCCCC
Confidence            4667888999999999999999865433     4999999753    3567999999999999 9999999999999876


Q ss_pred             ceeEEEecCCCCCCHHhHc----------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY----------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l----------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        .+|++|||+||||..+|          ..++..++..++.||++|+.||+++++||=+.
T Consensus       770 --~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDL  828 (1025)
T KOG1095|consen  770 --PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDL  828 (1025)
T ss_pred             --cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcch
Confidence              99999999999999999          24889999999999999999999999999653

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.76  E-value=1.2e-17  Score=143.06  Aligned_cols=121  Identities=17%  Similarity=0.307  Sum_probs=104.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC----CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN----TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~----~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++.+.||+|+||.||+|.+..    ++..|++|.+....    .+.+.+|+.+++.++ |+||+++++++...+ .
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~-~   82 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLS-HQNILPILHVCIEDG-E   82 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCC-C
Confidence            5789999999999999999999875    35889999986432    456789999999998 999999999877643 3


Q ss_pred             eeEEEecCCCCCCHHhHc-----------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLY-----------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l-----------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ..++++||+.+|+|.+++           ..+++..+..++.||+.||+|||++||+|.+..
T Consensus        83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~  144 (280)
T cd05043          83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIA  144 (280)
T ss_pred             CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence            389999999999999998           137899999999999999999999999998543

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.76  E-value=7e-18  Score=142.65  Aligned_cols=112  Identities=18%  Similarity=0.280  Sum_probs=97.9

Q ss_pred             eEeeecCceEEEEEEEcCCC---cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          131 RKVGRGKYSEVFEGINVNTN---ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      ++||+|+||.||+|.+...+   ..+|+|.+....    .+.+.+|+.+++.+. |+||+++++++... .  .++||||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~-~--~~~v~e~   76 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLD-HPCIVRLIGVCKGE-P--LMLVMEL   76 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcC-CCCeeeEEEEEcCC-c--eEEEEEe
Confidence            46999999999999886655   789999997543    456889999999999 99999999987644 3  8999999


Q ss_pred             CCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          204 VNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       204 ~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +.+|+|.+++   ..+++..+..++.|++.||+|||++||+|.+..
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~  122 (257)
T cd05060          77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLA  122 (257)
T ss_pred             CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcc
Confidence            9999999999   458999999999999999999999999998543

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.76  E-value=1.3e-17  Score=142.50  Aligned_cols=118  Identities=28%  Similarity=0.462  Sum_probs=103.8

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      |++.+.||+|+||.||+|.+..++..+|+|.+....     .+.+.+|+.+++.++ |+||+++++++.+...+..++||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv~   79 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMVF   79 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEEe
Confidence            678899999999999999999899999999997542     356789999999999 99999999999887223499999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||++ ++|.+++    ..+++..+..++.||+.||+|||++|++|.+..
T Consensus        80 e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~  127 (287)
T cd07840          80 EYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIK  127 (287)
T ss_pred             cccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCc
Confidence            9997 5888888    368999999999999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.76  E-value=6.7e-18  Score=143.94  Aligned_cols=111  Identities=16%  Similarity=0.190  Sum_probs=93.4

Q ss_pred             EeeecCceEEEEEEEcCC--CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCC
Q 025443          132 KVGRGKYSEVFEGINVNT--NERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN  205 (252)
Q Consensus       132 ~lG~G~fg~V~~~~~~~~--~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~  205 (252)
                      .||+|+||.||++....+  ...+++|.++...    .+.+.+|+.+++.++ |+||+++++.+.+...  .|+||||++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~--~~lv~e~~~   78 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQ-HPNILQCLGQCVEAIP--YLLVFEYCE   78 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccC-CcchhheEEEecCCCc--cEEEEecCC
Confidence            699999999999976433  3356777765432    457889999999999 9999999999998866  999999999


Q ss_pred             CCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          206 STDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       206 gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|+|.+++       ..+.+..+..++.||+.||+|||++||+|++.
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~di  125 (268)
T cd05086          79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDL  125 (268)
T ss_pred             CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            99999998       13566778899999999999999999999854

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.76  E-value=1.3e-18  Score=146.52  Aligned_cols=120  Identities=17%  Similarity=0.282  Sum_probs=105.5

Q ss_pred             CCCCeEE-EeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEc--CCCceeEE
Q 025443          123 DQDDYEV-VRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRD--QHSKTPSL  199 (252)
Q Consensus       123 ~~~~y~~-~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~--~~~~~~~l  199 (252)
                      .+++|.+ .++||-|--|+|..|.++.+++.+|+|++..  ..+.++|+++.-...+|+|||+++++|+.  ++.+++.|
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D--s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLi  136 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD--SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLI  136 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc--CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEe
Confidence            3567776 4679999999999999999999999999854  45567999999888889999999999974  33467999


Q ss_pred             EecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          200 IFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       200 V~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||+|+||+|+..+     +.|+|.++..|++||+.|+.|||+.+|-|-+
T Consensus       137 VmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRD  186 (400)
T KOG0604|consen  137 VMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRD  186 (400)
T ss_pred             eeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhcc
Confidence            99999999999999     4599999999999999999999999998853

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.76  E-value=8.3e-18  Score=148.33  Aligned_cols=121  Identities=28%  Similarity=0.469  Sum_probs=105.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC---
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS---  194 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~---  194 (252)
                      ...+|.+.+.||+|+||.||++.+..++..||||.+...     ....+.+|+.+++.++ |+||+++++++.....   
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~ni~~~~~~~~~~~~~~~   81 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLD-HENVIAIKDIMPPPHREAF   81 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcC-CCCccchHHheeccccccc
Confidence            456899999999999999999999999999999998642     2446778999999999 9999999998875431   


Q ss_pred             ceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ..+||||||++ ++|.+++   +.+++..+..++.||+.||.|||++||+|.+.
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl  134 (337)
T cd07858          82 NDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDL  134 (337)
T ss_pred             CcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence            24899999996 7898888   56899999999999999999999999999743

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.76  E-value=9.2e-18  Score=144.76  Aligned_cols=119  Identities=21%  Similarity=0.288  Sum_probs=103.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      ..+|.+.+.||+|+||.||+|.+.     .++..+++|.+....   .+.+.+|+.++++++ |+||+++++++.+.+. 
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~-   81 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGDP-   81 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCc-
Confidence            457999999999999999999853     345679999987543   356889999999999 9999999999998866 


Q ss_pred             eeEEEecCCCCCCHHhHcc-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLYP-------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l~-------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       .++||||+++++|.+++.                   .+++..+..++.||+.||+|||++||+|.+.
T Consensus        82 -~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dl  149 (291)
T cd05094          82 -LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDL  149 (291)
T ss_pred             -eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccc
Confidence             999999999999999981                   2788999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.76  E-value=4.6e-19  Score=147.70  Aligned_cols=119  Identities=22%  Similarity=0.319  Sum_probs=107.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-------c----hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-------K----KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      -..|.-.+.||.|..+.|.+|.++.+|..+|+|++...       .    .+...+|+.||+++.|||+|+.+.++|+.+
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~   95 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD   95 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence            45677788999999999999999999999999999631       1    345679999999999999999999999999


Q ss_pred             CCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          193 HSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ..  +++|+|+|..|.|+|+|   -.++|...+.|++|+++|++|||.++|||-+
T Consensus        96 sF--~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRD  148 (411)
T KOG0599|consen   96 AF--VFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRD  148 (411)
T ss_pred             ch--hhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            87  99999999999999999   3699999999999999999999999999964

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.76  E-value=1.4e-18  Score=156.96  Aligned_cols=121  Identities=21%  Similarity=0.291  Sum_probs=107.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------hHHHHHHHHHHHhcC--CCCcceeeeeEE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------KKKIKREIKILQNLC--GGPNVVKLLDIV  189 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------~~~~~~Ei~il~~l~--~h~nIv~l~~~~  189 (252)
                      ...+|..++.+|+|+||.|++|.++.....|+||.|.+++           .-.+-.||.||..|+  .|+||++++++|
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF  638 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF  638 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence            3467999999999999999999999999999999997654           223567999999997  489999999999


Q ss_pred             EcCCCceeEEEecCC-CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          190 RDQHSKTPSLIFEYV-NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       190 ~~~~~~~~~lV~E~~-~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++++.  +||+||-- +|-||+++|   .+++|.++..|++||.-|+++||++||||-++
T Consensus       639 Eddd~--yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdi  696 (772)
T KOG1152|consen  639 EDDDY--YYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDI  696 (772)
T ss_pred             ecCCe--eEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceeccc
Confidence            99977  99999975 578999999   67999999999999999999999999999753

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=2.1e-19  Score=152.86  Aligned_cols=115  Identities=21%  Similarity=0.326  Sum_probs=106.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|..++.||+|.||+|-+|+.+.+++.+|||+++++-      ...-..|-++|+.++ ||.+..|...|..++.  +
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~dr--l  243 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDR--L  243 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCce--E
Confidence            578999999999999999999999999999999998642      234568999999999 9999999999999876  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTV  241 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV  241 (252)
                      |+||||..||+|+.+|   +.|+|+.++.+-.+|+.||.|||+++||
T Consensus       244 CFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~iv  290 (516)
T KOG0690|consen  244 CFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIV  290 (516)
T ss_pred             EEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCee
Confidence            9999999999999999   5699999999999999999999999996

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.76  E-value=1.2e-17  Score=143.49  Aligned_cols=111  Identities=17%  Similarity=0.235  Sum_probs=93.9

Q ss_pred             EeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHh---cCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          132 KVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQN---LCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       132 ~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~---l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .||+|+||.||++.+..+++.+|+|.+....      ...+.+|..+++.   .+ |+||+.+++.+.+.+.  .++|||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~--~~lv~e   77 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMTYAFHTPDK--LCFILD   77 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCC-CCcEeEEEEEEecCCe--EEEEEe
Confidence            3899999999999999999999999986432      2234455544443   35 9999999999998765  999999


Q ss_pred             CCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |++||+|.+++   +.+++..+..++.|++.||+|||++||+|.+.
T Consensus        78 ~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~di  123 (279)
T cd05633          78 LMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDL  123 (279)
T ss_pred             cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCC
Confidence            99999999888   56999999999999999999999999999854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.76  E-value=1e-17  Score=143.74  Aligned_cols=119  Identities=18%  Similarity=0.255  Sum_probs=103.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      ..+|++.++||+|+||.||++...     .++..+|+|.++...   .+.+.+|+++++.++ |+||+++++++.+.+. 
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~-   81 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQ-HQHIVRFYGVCTEGRP-   81 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCC-CCCCceEEEEEecCCc-
Confidence            457888999999999999999742     346789999986533   457899999999998 9999999999998866 


Q ss_pred             eeEEEecCCCCCCHHhHcc------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLYP------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l~------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       .++||||+.+|+|.+++.                  .+++..+..++.||+.||+|||++||+|.+.
T Consensus        82 -~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dl  148 (280)
T cd05092          82 -LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDL  148 (280)
T ss_pred             -eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence             999999999999999981                  3788999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.76  E-value=1.1e-17  Score=142.61  Aligned_cols=112  Identities=17%  Similarity=0.259  Sum_probs=97.5

Q ss_pred             EeeecCceEEEEEEEcCCCc--EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCC
Q 025443          132 KVGRGKYSEVFEGINVNTNE--RCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN  205 (252)
Q Consensus       132 ~lG~G~fg~V~~~~~~~~~~--~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~  205 (252)
                      .||+|+||.||+|.+..++.  .+|+|.++..    ..+.+.+|+.++.++.+|+||+++++++...+.  +|+||||+.
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~--~~lv~e~~~   79 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY--LYLAIEYAP   79 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCC--ceEEEEeCC
Confidence            58999999999999987775  4688888642    235688999999999449999999999998866  999999999


Q ss_pred             CCCHHhHcc-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          206 STDFKVLYP-------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       206 gg~L~~~l~-------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|+|.+++.                   .+++.++..++.|++.||+|||++||+|.+.
T Consensus        80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~di  138 (270)
T cd05047          80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDL  138 (270)
T ss_pred             CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccc
Confidence            999999981                   3688999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.76  E-value=3.5e-18  Score=170.00  Aligned_cols=117  Identities=20%  Similarity=0.305  Sum_probs=103.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      ..|...+.||+|+||.||+|.+..++..||+|.++.... ....|++++++++ |||||++++++.+.+.  .|+|||||
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~l~~l~-HpnIv~~~~~~~~~~~--~~lv~Ey~  765 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-IPSSEIADMGKLQ-HPNIVKLIGLCRSEKG--AYLIHEYI  765 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-ccHHHHHHHhhCC-CCCcceEEEEEEcCCC--CEEEEeCC
Confidence            346667889999999999999988999999999864332 2246799999999 9999999999998866  99999999


Q ss_pred             CCCCHHhHccCCCHHHHHHHHHHHHHHHHHHH---HCCCeEEee
Q 025443          205 NSTDFKVLYPTLTDYDIRYYIYELLKVMSIFI---RWSTVLCYQ  245 (252)
Q Consensus       205 ~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH---~~~IV~~~~  245 (252)
                      +||+|.+++..+++..+..|+.||+.||+|||   +.+|||.+.
T Consensus       766 ~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dl  809 (968)
T PLN00113        766 EGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNL  809 (968)
T ss_pred             CCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCC
Confidence            99999999988999999999999999999999   679999854

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.76  E-value=1.5e-17  Score=143.15  Aligned_cols=118  Identities=14%  Similarity=0.208  Sum_probs=105.3

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .+|...+.||+|+||.||++.+..++..+++|.++...   .+.+.+|+.+++.++ |+||+++++++...+.  .|+|+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~-h~~vv~~~~~~~~~~~--~~~v~   95 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HPNIVEMYSSYLVGDE--LWVVM   95 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcC-CCChheEEEEEEcCCe--EEEEE
Confidence            35666689999999999999998899999999986432   456789999999999 9999999999988765  99999


Q ss_pred             cCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||++|++|.+++  ..+++..+..++.|++.||+|||++||+|.+.
T Consensus        96 e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl  141 (285)
T cd06648          96 EFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDI  141 (285)
T ss_pred             eccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            999999999998  57899999999999999999999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.75  E-value=6.7e-18  Score=148.69  Aligned_cols=120  Identities=23%  Similarity=0.439  Sum_probs=104.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC--Cce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH--SKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~--~~~  196 (252)
                      .++|++.+.||+|+||.||+|.+..+|..||+|++...     ..+.+.+|+.+|+.++ |+||+++++++....  ...
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~   82 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADFKD   82 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCCce
Confidence            47899999999999999999999999999999998643     2456778999999999 999999999886432  235


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|+||||+. |+|.+++   ..+++..+..++.||+.||.|||++||||.+.
T Consensus        83 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dl  133 (334)
T cd07855          83 VYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDL  133 (334)
T ss_pred             EEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            899999996 6898888   56899999999999999999999999999643

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.75  E-value=1.5e-17  Score=144.01  Aligned_cols=121  Identities=26%  Similarity=0.427  Sum_probs=103.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC---
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS---  194 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~---  194 (252)
                      ..++|++.+.||+|+||.||+|.+..+++.+|+|++....     ...+.+|+++++.++ |+||+++++++.+...   
T Consensus         6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~   84 (311)
T cd07866           6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK-HPNVVPLIDMAVERPDKSK   84 (311)
T ss_pred             ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcC-CCCccchhhheeccccccc
Confidence            3689999999999999999999999999999999985421     245678999999999 9999999998865432   


Q ss_pred             ---ceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 ---KTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ---~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                         ..+++||||++ ++|...+    ..+++..+..++.||++||.|||++||+|.+.
T Consensus        85 ~~~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl  141 (311)
T cd07866          85 RKRGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDI  141 (311)
T ss_pred             ccCceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence               24799999997 5677666    36999999999999999999999999999864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.75  E-value=3.3e-18  Score=146.62  Aligned_cols=119  Identities=23%  Similarity=0.357  Sum_probs=103.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC-----CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT-----NERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      ..+|++.+.||+|+||.||+|.+..+     +..||+|+++...    .+.+.+|+.++..++ |+||+++++++.+...
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~   82 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQ-HPNIVCLLGVVTKEQP   82 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEcCCCc
Confidence            45688889999999999999987543     5789999997433    356789999999999 9999999999998876


Q ss_pred             ceeEEEecCCCCCCHHhHc-------------------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY-------------------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l-------------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        .++++||+.+++|.+++                   ..+++..+..++.|++.||+|||++||+|++.
T Consensus        83 --~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dl  150 (283)
T cd05091          83 --LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDL  150 (283)
T ss_pred             --eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence              99999999999999997                   13788889999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.75  E-value=8.2e-18  Score=141.47  Aligned_cols=117  Identities=19%  Similarity=0.342  Sum_probs=105.1

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +|++.+.||+|+||.||++.+..++..+|+|.+...     ....+.+|+++++.++ |+||+++++++.+...  .|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~~v   77 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVN-HPNIISYKEAFLDGNK--LCIV   77 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCE--EEEE
Confidence            588999999999999999999999999999998642     2446778999999999 9999999999988755  9999


Q ss_pred             ecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+++++|.+++       ..+++..+..++.|++.||.|||++||+|.+.
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l  129 (256)
T cd08530          78 MEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDL  129 (256)
T ss_pred             ehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Confidence            9999999999988       34899999999999999999999999999754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PHA02988 hypothetical protein; Provisional

Probab=99.75  E-value=1.1e-17  Score=144.16  Aligned_cols=111  Identities=18%  Similarity=0.216  Sum_probs=97.0

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEc--CCCceeEEEec
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRD--QHSKTPSLIFE  202 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~--~~~~~~~lV~E  202 (252)
                      ..||+|++|.||+|.+  +|+.||||.++...      .+.+.+|+.+|++++ |+|||++++++.+  ++...++||||
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~~~~~~~~~~lv~E  102 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID-SNNILKIYGFIIDIVDDLPRLSLILE  102 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC-CCCEEEEeeeEEecccCCCceEEEEE
Confidence            5689999999999998  78999999997532      356779999999999 9999999999977  43345899999


Q ss_pred             CCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEe
Q 025443          203 YVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCY  244 (252)
Q Consensus       203 ~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~  244 (252)
                      ||+||+|.+++   +.+++.....++.|++.||.|||+ .+++|.+
T Consensus       103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrd  148 (283)
T PHA02988        103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKN  148 (283)
T ss_pred             eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence            99999999999   568999999999999999999998 4888753

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.75  E-value=9.7e-18  Score=143.61  Aligned_cols=115  Identities=30%  Similarity=0.493  Sum_probs=102.6

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      |++.+.||+|++|.||+|.+..+|..||+|++....     ...+.+|+++++.++ |+||+++++++.+.+.  .|+||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~--~~iv~   77 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELN-HPNIVRLLDVVHSENK--LYLVF   77 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcC-CCCccCHhheeccCCe--EEEEE
Confidence            567889999999999999999999999999996432     356789999999999 9999999999988865  99999


Q ss_pred             cCCCCCCHHhHc---c--CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY---P--TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l---~--~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||++ ++|.+++   .  .+++..+..++.|+++||+|||++|++|.+.
T Consensus        78 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl  125 (283)
T cd07835          78 EFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDL  125 (283)
T ss_pred             eccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCC
Confidence            9996 6899888   2  5899999999999999999999999999854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.75  E-value=1.2e-17  Score=148.29  Aligned_cols=111  Identities=14%  Similarity=0.116  Sum_probs=90.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-CCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCccee-eeeEEEcCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-TNERCIIKILKPV--------KKKKIKREIKILQNLCGGPNVVK-LLDIVRDQH  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vAvK~i~~~--------~~~~~~~Ei~il~~l~~h~nIv~-l~~~~~~~~  193 (252)
                      .++|.+.+.||+|+||+||+|.+.. ++..+|||++...        ..+.+.+|+++|+.++ |+||+. ++++    +
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-h~~iv~~l~~~----~   91 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-GIGVVPQLLAT----G   91 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-CCCCCcEEEEc----C
Confidence            5789999999999999999999876 6788899987532        1456899999999999 999884 5542    3


Q ss_pred             CceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          194 SKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       194 ~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .  .|||||||+|++|... ....   ...++.|+++||.|||++||||++.
T Consensus        92 ~--~~LVmE~~~G~~L~~~-~~~~---~~~~~~~i~~aL~~lH~~gIiHrDL  137 (365)
T PRK09188         92 K--DGLVRGWTEGVPLHLA-RPHG---DPAWFRSAHRALRDLHRAGITHNDL  137 (365)
T ss_pred             C--cEEEEEccCCCCHHHh-Cccc---hHHHHHHHHHHHHHHHHCCCeeCCC
Confidence            3  7999999999999743 2111   2578999999999999999999987

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.75  E-value=4.7e-18  Score=143.85  Aligned_cols=116  Identities=18%  Similarity=0.312  Sum_probs=101.5

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      +|.+.+.||+|+||.||++.+..++..+++|.++..        ....+..|+.+++.++ |+||+++++++.+...  .
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~   77 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD-HPAIVKFHASFLERDA--F   77 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC-CCcHHHHHHHHhcCCc--e
Confidence            588999999999999999999877777777776531        2335678999999999 9999999999988866  9


Q ss_pred             EEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          198 SLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ++||||+++++|.+++       ..+++..+..++.|++.||.|||++||+|++
T Consensus        78 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~  131 (260)
T cd08222          78 CIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRD  131 (260)
T ss_pred             EEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccC
Confidence            9999999999999887       3589999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.75  E-value=1.1e-17  Score=140.75  Aligned_cols=112  Identities=25%  Similarity=0.399  Sum_probs=100.6

Q ss_pred             eEeeecCceEEEEEEEcCC---CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          131 RKVGRGKYSEVFEGINVNT---NERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      +.||+|+||.||+|.+...   +..||+|.++...    .+.+.+|++++..++ |+||+++++++.+...  +++||||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~--~~lv~e~   77 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEP--LYLVLEY   77 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC-CCChheeeeeecCCCc--eEEEEEe
Confidence            4689999999999999766   8899999997543    467889999999999 9999999999998755  9999999


Q ss_pred             CCCCCHHhHcc------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLYP------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l~------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +++|+|.+++.            .+++.++..++.|++.||+|||++||+|.+.
T Consensus        78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di  131 (262)
T cd00192          78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDL  131 (262)
T ss_pred             ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCcc
Confidence            99999999982            2689999999999999999999999999864

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.75  E-value=1.9e-17  Score=153.88  Aligned_cols=118  Identities=15%  Similarity=0.164  Sum_probs=92.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC-cEEEEE------------------Eeecc--chHHHHHHHHHHHhcCCCCcc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN-ERCIIK------------------ILKPV--KKKKIKREIKILQNLCGGPNV  182 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vAvK------------------~i~~~--~~~~~~~Ei~il~~l~~h~nI  182 (252)
                      .++|++++.||+|+||+||+|..+... ...+.|                  .+...  ....+.+|+.+|+.++ |+||
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~-HpnI  225 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN-HENI  225 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC-CCCc
Confidence            578999999999999999998764332 222222                  11111  1345789999999999 9999


Q ss_pred             eeeeeEEEcCCCceeEEEecCCCCCCHHhHc--c------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          183 VKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--P------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       183 v~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l--~------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |++++++.+.+.  .|+|||++. ++|..++  .      ......++.|+.||+.||+|||++||||.+.
T Consensus       226 v~l~~~~~~~~~--~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDL  293 (501)
T PHA03210        226 LKIEEILRSEAN--TYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDI  293 (501)
T ss_pred             CcEeEEEEECCe--eEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            999999998876  999999996 6777766  1      2346678899999999999999999999864

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.75  E-value=5.5e-18  Score=149.32  Aligned_cols=121  Identities=31%  Similarity=0.526  Sum_probs=105.4

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhc-CCCCcceeeeeEEEcCCCce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNL-CGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l-~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..++|++.+.||+|+||.||+|.+..++..+|+|++...     ....+.+|+.++..+ + |+||+++++++...+...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~-h~ni~~~~~~~~~~~~~~   83 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGD-HPNIVKLLNVIKAENDKD   83 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcC-CCCccceeeeeccCCCce
Confidence            357899999999999999999999889999999988532     234577899999999 7 999999999987655445


Q ss_pred             eEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|+||||++ ++|..++  +.+++..+..++.||+.||+|||++||+|.+.
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl  133 (337)
T cd07852          84 IYLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDL  133 (337)
T ss_pred             EEEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            899999997 6999988  46899999999999999999999999999854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.75  E-value=3e-17  Score=137.06  Aligned_cols=117  Identities=29%  Similarity=0.422  Sum_probs=106.9

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      +|...+.||+|+||.||++.+..++..+++|++...   ..+.+.+|+.+++.++ |+||+++++++..+..  .++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~l~~e   77 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDE--LWIVME   77 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCe--EEEEEe
Confidence            478889999999999999999889999999999754   3567899999999999 9999999999998865  999999


Q ss_pred             CCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |++|++|.+++    ..+++..+..++.|++.||.|||++|++|.+.
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl  124 (253)
T cd05122          78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDI  124 (253)
T ss_pred             cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCC
Confidence            99999999998    36899999999999999999999999999854

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.75  E-value=1.6e-17  Score=145.27  Aligned_cols=117  Identities=21%  Similarity=0.283  Sum_probs=103.1

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ..|+..+.||+|+||.||++.+..++..+|+|++....      ...+.+|+++++.++ |+|++++++++.++..  .+
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~--~~  101 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK-HPNSIEYKGCYLREHT--AW  101 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCe--EE
Confidence            44788899999999999999999999999999986421      346889999999999 9999999999998866  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||+. |+|.+++    ..+++.++..++.|++.||.|||++||+|++.
T Consensus       102 lv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL  151 (317)
T cd06635         102 LVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDI  151 (317)
T ss_pred             EEEeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            9999997 5777776    45899999999999999999999999999853

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.75  E-value=7.1e-18  Score=145.96  Aligned_cols=116  Identities=13%  Similarity=0.179  Sum_probs=103.2

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      |.....||+|+||.||++.+..++..||||.+...   ....+.+|+.+++.++ |+||+++++.+.+.+.  .|+||||
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~--~~lv~e~   98 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDE--LWVVMEF   98 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcC-CcchhheeeEEEeCCE--EEEEEec
Confidence            33446799999999999999999999999998542   2456889999999999 9999999999998866  9999999


Q ss_pred             CCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +++++|.+++  ..+++..++.++.|++.||+|||++||||.+.
T Consensus        99 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl  142 (292)
T cd06657          99 LEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDI  142 (292)
T ss_pred             CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            9999999988  56899999999999999999999999999743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.74  E-value=2.3e-17  Score=141.54  Aligned_cols=111  Identities=17%  Similarity=0.241  Sum_probs=93.3

Q ss_pred             EeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHH---HHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          132 KVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKI---LQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       132 ~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~i---l~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .||+|+||.||++.+..+++.||+|.+....      ...+..|..+   ++... |++|+.+++.+.+.+.  +|+|||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~--~~~v~e   77 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDK--LSFILD   77 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCC-CCcEeeeeeeeecCCE--EEEEEe
Confidence            3899999999999999999999999986532      1223344443   44445 9999999999998865  999999


Q ss_pred             CCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+.||+|.+++   +.+++..++.++.|++.||+|||++||+|.+.
T Consensus        78 ~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di  123 (278)
T cd05606          78 LMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDL  123 (278)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCC
Confidence            99999999988   56899999999999999999999999999853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.74  E-value=3.2e-17  Score=153.99  Aligned_cols=124  Identities=22%  Similarity=0.385  Sum_probs=110.4

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcC---CCce
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQ---HSKT  196 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~---~~~~  196 (252)
                      ...+.|++.+.||.|.+|.||++.++++++.+|+|++...  ..+++..|.++|+....|||++.+|++|...   ..+.
T Consensus        16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq   95 (953)
T KOG0587|consen   16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ   95 (953)
T ss_pred             CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence            3467899999999999999999999999999999998653  3567889999999998899999999999742   2356


Q ss_pred             eEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|||||||.||+..|++     +++.|..+.+|+++++.||.+||...++|-++
T Consensus        96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDi  149 (953)
T KOG0587|consen   96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDI  149 (953)
T ss_pred             EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecc
Confidence            99999999999999998     67999999999999999999999999998753

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.74  E-value=2.2e-17  Score=138.87  Aligned_cols=112  Identities=20%  Similarity=0.323  Sum_probs=100.0

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      +.||+|+||.||++.+.. ++.||+|.++...    ...+.+|+++++.++ |+||+++++++.+...  .++||||+.|
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~~v~e~~~~   76 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYD-HPNIVKLIGVCVQKQP--IYIVMELVPG   76 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCeEEEEEEEecCCC--eEEEEEcCCC
Confidence            368999999999999977 9999999987532    457889999999999 9999999999998876  9999999999


Q ss_pred             CCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          207 TDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       207 g~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ++|.+++    ..+++..+..++.|++.||.|||++||+|.+..
T Consensus        77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~  120 (251)
T cd05041          77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLA  120 (251)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcC
Confidence            9999998    357899999999999999999999999998543

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.74  E-value=1.2e-17  Score=142.84  Aligned_cols=117  Identities=26%  Similarity=0.420  Sum_probs=102.7

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      |++.+.||+|+||.||+|.+..+++.||||++....    .....+|+..++++++|+||+++++++.+++.  .++|||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~--~~lv~e   78 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDE--LYFVFE   78 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCc--EEEEEe
Confidence            677899999999999999998899999999986432    23456799999999889999999999998765  999999


Q ss_pred             CCCCCCHHhHc---c--CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          203 YVNSTDFKVLY---P--TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       203 ~~~gg~L~~~l---~--~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |+ +|+|.+++   .  .+++..+..++.|++.||.|||++||+|.+.+
T Consensus        79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~  126 (283)
T cd07830          79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLK  126 (283)
T ss_pred             cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            99 78998888   2  67999999999999999999999999998543

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=5.6e-19  Score=159.93  Aligned_cols=117  Identities=20%  Similarity=0.285  Sum_probs=105.3

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec------cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP------VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ..|.-++.||.|+||-||-|.+..+...||||.+.-      ++.+.+..|+..|++|+ |||+|.|.|+|.....  .|
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-HPntieYkgCyLre~T--aW  102 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-HPNTIEYKGCYLREHT--AW  102 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-CCCcccccceeeccch--HH
Confidence            457778899999999999999999999999999963      23678999999999999 9999999999998876  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||- |+-.|++    +.+-+.++.-|+.+.+.||.|||+.+.||-++
T Consensus       103 LVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDi  152 (948)
T KOG0577|consen  103 LVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDI  152 (948)
T ss_pred             HHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhc
Confidence            9999996 6777777    78999999999999999999999999888654

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.74  E-value=2e-17  Score=146.33  Aligned_cols=123  Identities=24%  Similarity=0.434  Sum_probs=106.6

Q ss_pred             cCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC-
Q 025443          121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS-  194 (252)
Q Consensus       121 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~-  194 (252)
                      |...++|++.+.||+|+||.||+|.+..++..||+|++...     ..+.+.+|+.+++.++ |+||+++++++...+. 
T Consensus        11 ~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~   89 (343)
T cd07851          11 WEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMD-HENVIGLLDVFTPASSL   89 (343)
T ss_pred             ecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhcc-CCCHHHHHHHhhccccc
Confidence            34578899999999999999999999999999999998642     2355778999999998 9999999998765432 


Q ss_pred             ---ceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 ---KTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ---~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                         ..+++|+||+ +++|.+++  ..+++..+..++.||++||.|||++||+|.+.
T Consensus        90 ~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dl  144 (343)
T cd07851          90 EDFQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDL  144 (343)
T ss_pred             cccccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence               2489999999 57999998  57999999999999999999999999999854

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.74  E-value=2.6e-17  Score=139.27  Aligned_cols=113  Identities=21%  Similarity=0.367  Sum_probs=94.6

Q ss_pred             eEeeecCceEEEEEEEcC---CCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          131 RKVGRGKYSEVFEGINVN---TNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~---~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      +.||+|+||.||+|.+..   .+..||+|.+...    ..+.+.+|+.+++.++ |+||+++++++...+ +..++||||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~-~~~~lv~e~   78 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFS-HPNVLSLLGICLPSE-GSPLVVLPY   78 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCC-CCCcceEEEEeecCC-CCcEEEEec
Confidence            368999999999998754   3457999998542    2457789999999999 999999999876443 338999999


Q ss_pred             CCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +.+|+|.+++    ..+++..+..++.||+.||.|||++||+|.+.
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  124 (262)
T cd05058          79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDL  124 (262)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence            9999999998    34678888999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.74  E-value=3.5e-17  Score=144.72  Aligned_cols=123  Identities=25%  Similarity=0.444  Sum_probs=106.2

Q ss_pred             cCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC-
Q 025443          121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS-  194 (252)
Q Consensus       121 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~-  194 (252)
                      |...++|.+.+.||+|+||.||+|.+..+|..||+|.+...     ....+.+|+.+++.++ |+||+++++++..... 
T Consensus        11 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~   89 (342)
T cd07879          11 WELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQ-HENVIGLLDVFTSAVSG   89 (342)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcC-CCCccchhheecccccC
Confidence            44567899999999999999999999889999999998642     1345789999999999 9999999999875432 


Q ss_pred             ---ceeEEEecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 ---KTPSLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ---~~~~lV~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                         ..+|+||||+. ++|..++ ..+++..+..++.|++.||+|||++||+|++.
T Consensus        90 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl  143 (342)
T cd07879          90 DEFQDFYLVMPYMQ-TDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDL  143 (342)
T ss_pred             CCCceEEEEecccc-cCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence               23799999997 5888877 47999999999999999999999999999865

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=4.7e-18  Score=156.40  Aligned_cols=111  Identities=20%  Similarity=0.309  Sum_probs=101.8

Q ss_pred             EeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCC
Q 025443          132 KVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTD  208 (252)
Q Consensus       132 ~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~  208 (252)
                      +||+|+||+||-|+++.+...+|||.+....   .+-+..||.+.++|+ |.|||+++|.+.+++.  +-|.||-++||+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf--~kIFMEqVPGGS  658 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLR-HKNIVRYLGSVSENGF--FKIFMEQVPGGS  658 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCe--EEEEeecCCCCc
Confidence            6999999999999999999999999997543   466889999999999 9999999999988876  999999999999


Q ss_pred             HHhHc----cCC--CHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          209 FKVLY----PTL--TDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       209 L~~~l----~~l--~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |.++|    +++  +|..+..|.+||++||.|||++.|||-++
T Consensus       659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDI  701 (1226)
T KOG4279|consen  659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDI  701 (1226)
T ss_pred             HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccc
Confidence            99999    566  88999999999999999999999999754

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.73  E-value=1.3e-17  Score=141.72  Aligned_cols=111  Identities=23%  Similarity=0.310  Sum_probs=96.8

Q ss_pred             eEeeecCceEEEEEEEcCCC------cEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          131 RKVGRGKYSEVFEGINVNTN------ERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~------~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +.||+|+||.||+|.+....      ..+|+|.+...    ....+.+|+.+++.++ |+||+++++++.+.+.  .++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~~v   77 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFN-HPNIVKLLGVCLLNEP--QYII   77 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcC-CCCeeeEeeeecCCCC--eEEE
Confidence            36899999999999986543      67999988643    3557889999999999 9999999999988866  9999


Q ss_pred             ecCCCCCCHHhHcc----------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          201 FEYVNSTDFKVLYP----------TLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       201 ~E~~~gg~L~~~l~----------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||++||+|.+++.          .+++.++..++.||+.||.|||++||+|++
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~d  131 (269)
T cd05044          78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRD  131 (269)
T ss_pred             EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            99999999999981          267899999999999999999999999974

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.73  E-value=2.3e-17  Score=138.40  Aligned_cols=109  Identities=19%  Similarity=0.301  Sum_probs=99.4

Q ss_pred             eeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          133 VGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       133 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      ||.|+||.||++.+..+++.+|+|+++...      ...+.+|+++++.++ |+||+++++.+..+..  +|+||||+.+
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~~v~e~~~~   77 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEK--LYLVLEYAPG   77 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCe--eEEEEecCCC
Confidence            699999999999998889999999987532      347889999999999 9999999999988765  9999999999


Q ss_pred             CCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          207 TDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       207 g~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ++|.+++   ..+++..+..++.|+++||.|||+.|++|.+
T Consensus        78 ~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~  118 (250)
T cd05123          78 GELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRD  118 (250)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            9999999   4689999999999999999999999999984

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.73  E-value=5.1e-18  Score=154.56  Aligned_cols=122  Identities=17%  Similarity=0.280  Sum_probs=106.6

Q ss_pred             CCCCCe-EEEeEeeecCceEEEEEEEcCCCcEEEEEEeec-------cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCC
Q 025443          122 GDQDDY-EVVRKVGRGKYSEVFEGINVNTNERCIIKILKP-------VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQH  193 (252)
Q Consensus       122 ~~~~~y-~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-------~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~  193 (252)
                      ...++| +....||+|+|-+||+|.|..+|..||.-.++.       ...++|..|+.+|+.|+ |+|||++|++|.+..
T Consensus        36 ~p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~  114 (632)
T KOG0584|consen   36 DPTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTD  114 (632)
T ss_pred             CCCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC-CCceeeeeeheecCC
Confidence            345555 446789999999999999999999998777653       23578999999999999 999999999999888


Q ss_pred             CceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          194 SKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       194 ~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      .+++-+|.|++..|+|+.|+   ++++...++.|++||++||.|||++.==++|
T Consensus       115 n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIH  168 (632)
T KOG0584|consen  115 NKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIH  168 (632)
T ss_pred             CceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccc
Confidence            78899999999999999999   7899999999999999999999999754443

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.73  E-value=3.2e-17  Score=138.37  Aligned_cols=111  Identities=17%  Similarity=0.164  Sum_probs=96.9

Q ss_pred             eEeeecCceEEEEEEEcC-CC--cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          131 RKVGRGKYSEVFEGINVN-TN--ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~-~~--~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      +.||+|+||.||+|.+.. .+  ..||||.++...    .+.+.+|+.++++++ |+||+++++.+.+ ..  +++||||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~--~~~v~e~   76 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLD-HENLIRLYGVVLT-HP--LMMVTEL   76 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcC-CCCccceeEEEcC-Ce--EEEEEEe
Confidence            368999999999999865 33  369999997643    457889999999999 9999999999988 44  9999999


Q ss_pred             CCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +++|+|.+++     ..+++..+..++.|++.||+|||++||+|.+.
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di  123 (257)
T cd05040          77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDL  123 (257)
T ss_pred             cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence            9999999998     24789999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.73  E-value=1.6e-17  Score=151.29  Aligned_cols=115  Identities=17%  Similarity=0.335  Sum_probs=101.2

Q ss_pred             eEEEeEeeecCceEEEEEEEcCC----CcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNT----NERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~----~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ....+.||+|-||.||.|.+..-    ...||||..+..    +.+.|..|..+|++++ |||||+|+|++.+..   .|
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfd-HphIikLIGv~~e~P---~W  466 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFD-HPHIIKLIGVCVEQP---MW  466 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCC-Ccchhheeeeeeccc---ee
Confidence            34456899999999999998543    345899999763    4678999999999999 999999999998875   89


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||++.-|.|..+|    ..++...+..|+.||+.||.|||+.++||-++
T Consensus       467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDI  517 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDI  517 (974)
T ss_pred             EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhh
Confidence            999999999999999    46888999999999999999999999999764

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.73  E-value=5e-17  Score=138.35  Aligned_cols=118  Identities=18%  Similarity=0.309  Sum_probs=99.0

Q ss_pred             eEEEeEeeecCceEEEEEEEcC---CCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC----
Q 025443          127 YEVVRKVGRGKYSEVFEGINVN---TNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS----  194 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~---~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~----  194 (252)
                      |++.+.||+|+||.||+|.+..   +++.||||++...     ..+++.+|+++++.++ |+||+++++++.....    
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~   79 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFD-HPNVIKLIGVSLRSRAKGRL   79 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCCCCcc
Confidence            5677899999999999998653   5788999998643     2456889999999999 9999999998865431    


Q ss_pred             ceeEEEecCCCCCCHHhHc---------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ...++++||+.+|+|.+++         ..+++..+..++.||+.||+|||++||+|++.
T Consensus        80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~di  139 (273)
T cd05074          80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDL  139 (273)
T ss_pred             cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeeccc
Confidence            1247899999999998876         14788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.73  E-value=6.4e-17  Score=141.26  Aligned_cols=117  Identities=21%  Similarity=0.279  Sum_probs=102.3

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      +.|...+.||+|+||.||+|.+..++..||+|++....      .+.+.+|+.+++.++ |+||+++++++.+...  .|
T Consensus        21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~   97 (313)
T cd06633          21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHT--AW   97 (313)
T ss_pred             HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCE--EE
Confidence            34777788999999999999999999999999986421      346789999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||+. |+|.+++    ..+++.++..++.||+.||.|||++||+|.+.
T Consensus        98 lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl  147 (313)
T cd06633          98 LVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDI  147 (313)
T ss_pred             EEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            9999996 6777776    45899999999999999999999999999743

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.73  E-value=3.3e-17  Score=139.98  Aligned_cols=115  Identities=32%  Similarity=0.493  Sum_probs=102.6

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      |++.+.||+|++|.||+|.+..+++.+++|.++...     ...+.+|+.+++.++ |+||+++++++.++..  +++||
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--~~~v~   77 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELN-HPNIIKLLDVFRHKGD--LYLVF   77 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCC--EEEEE
Confidence            567789999999999999998899999999986532     456889999999999 9999999999998866  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||++ ++|.+++    ..+++..+..++.||+.||.|||++||+|.+.
T Consensus        78 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl  124 (283)
T cd05118          78 EFMD-TDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDL  124 (283)
T ss_pred             eccC-CCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCc
Confidence            9997 4888877    37899999999999999999999999999853

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.72  E-value=8.9e-17  Score=141.39  Aligned_cols=119  Identities=25%  Similarity=0.355  Sum_probs=101.7

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCC--CcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcC--CCce
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNT--NERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQ--HSKT  196 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~--~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~--~~~~  196 (252)
                      +|++.+.||+|+||.||++.+..+  +..||+|++...     ..+.+.+|+.+++++++|+||+++++.+...  ....
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            588999999999999999999888  899999998642     1456788999999996699999999876432  2234


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|++|||++ ++|.+++   ..+++..++.++.||+.||+|||++||+|.+.
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dl  131 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDL  131 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            899999996 6899888   56899999999999999999999999999853

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.72  E-value=3.1e-17  Score=143.86  Aligned_cols=118  Identities=29%  Similarity=0.504  Sum_probs=104.3

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC---Ccee
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH---SKTP  197 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~---~~~~  197 (252)
                      +|++.+.||.|+||.||+|.+..++..||+|.+...     ..+.+.+|+.+++.++ |+||+++++++....   ...+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~~   79 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLR-HENIIGLLDILRPPSPEDFNDV   79 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcC-CcchhhhhhhhcccCcccccce
Confidence            588999999999999999999888999999998643     2467889999999999 999999999988764   1238


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+||||++ ++|.+++   ..+++..++.++.||+.||+|||++||+|++.
T Consensus        80 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dl  129 (330)
T cd07834          80 YIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDL  129 (330)
T ss_pred             EEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            99999998 5898888   46899999999999999999999999999854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.72  E-value=5.6e-17  Score=137.91  Aligned_cols=117  Identities=15%  Similarity=0.267  Sum_probs=100.6

Q ss_pred             CeEEEeEeeecCceEEEEEEEcC-CCcEEEEEEeecc-------------chHHHHHHHHHHHh-cCCCCcceeeeeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVN-TNERCIIKILKPV-------------KKKKIKREIKILQN-LCGGPNVVKLLDIVR  190 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~-~~~~vAvK~i~~~-------------~~~~~~~Ei~il~~-l~~h~nIv~l~~~~~  190 (252)
                      +|++.+.||+|+||.||++.+.. +++.+|+|.+...             ...++.+|+.++.+ ++ |+||+++++++.
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~-h~~i~~~~~~~~   79 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR-HPNIVRYYKTFL   79 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCC-CCCeeeEEeeEc
Confidence            47888999999999999999977 6788999998532             12456789988876 56 999999999999


Q ss_pred             cCCCceeEEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          191 DQHSKTPSLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       191 ~~~~~~~~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      +++.  .++||||++|++|.+++       ..+++..+..++.|++.||.|||+ .||+|.+.
T Consensus        80 ~~~~--~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl  140 (269)
T cd08528          80 ENDR--LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDL  140 (269)
T ss_pred             cCCe--EEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCC
Confidence            8866  99999999999999887       358999999999999999999996 78999754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.72  E-value=3.4e-17  Score=139.75  Aligned_cols=116  Identities=28%  Similarity=0.460  Sum_probs=103.8

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      |+..+.||+|+||.||+|.+..+++.||+|.+....     .+.+.+|+.+++.++ |+||+++++++.+.+.  .++||
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~--~~~v~   77 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELK-HPNIVKLLDVIHTERK--LYLVF   77 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCc--eEEEe
Confidence            567789999999999999999999999999997532     356788999999999 9999999999998865  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||++ ++|.+++    ..+++..+..++.|++.||.|||++||+|++..
T Consensus        78 e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~  125 (282)
T cd07829          78 EYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLK  125 (282)
T ss_pred             cCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            9998 5899998    268999999999999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=1.7e-18  Score=166.05  Aligned_cols=118  Identities=21%  Similarity=0.293  Sum_probs=108.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||.|.+++++.+++.+|+|++++-      ....|..|-+||..-+ .+-||+++..|.++.+  +
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~--L  150 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN-SEWIVQLHYAFQDERY--L  150 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccc--e
Confidence            58999999999999999999999999999999999752      2345888999999988 9999999999999976  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |+|||||.||||-.++   .++++++++.|+.+|..||.-||+.|.||=+
T Consensus       151 YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRD  200 (1317)
T KOG0612|consen  151 YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRD  200 (1317)
T ss_pred             EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceecc
Confidence            9999999999999999   5689999999999999999999999999964

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.71  E-value=5.9e-17  Score=135.84  Aligned_cols=105  Identities=17%  Similarity=0.203  Sum_probs=92.6

Q ss_pred             cCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCCHHhHc--
Q 025443          136 GKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--  213 (252)
Q Consensus       136 G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l--  213 (252)
                      |.||.||++++..+++.+|+|.++...  ...+|...+.... |+||+++++++.+.+.  .||||||++||+|.+++  
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~--~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS--EYSRERLTIIPHC-VPNMVCLHKYIVSEDS--VFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh--hhhhHHHHHHhcC-CCceeehhhheecCCe--EEEEEecCCCCCHHHHHHH
Confidence            889999999999999999999997643  3345666666666 9999999999998865  99999999999999998  


Q ss_pred             -cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          214 -PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       214 -~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       ..+++..+..++.|++.||+|||++||+|++.
T Consensus        79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dl  111 (237)
T cd05576          79 FLNIPEECVKRWAAEMVVALDALHREGIVCRDL  111 (237)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence             46899999999999999999999999999864

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.71  E-value=5.7e-17  Score=139.28  Aligned_cols=118  Identities=11%  Similarity=0.225  Sum_probs=100.4

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ++|+..+.||+|+||.||++.+..+++.+|+|.+...    ....+.+|+.++.++.+|+||+++++++..++.  .+++
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~--~~~~   81 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGD--CWIC   81 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCc--EEEE
Confidence            4566778999999999999999999999999998643    245678999999999769999999999988765  8999


Q ss_pred             ecCCCCCCHHhHc--------cCCCHHHHHHHHHHHHHHHHHHHHC-CCeEEee
Q 025443          201 FEYVNSTDFKVLY--------PTLTDYDIRYYIYELLKVMSIFIRW-STVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l--------~~l~~~~~~~i~~qi~~aL~yLH~~-~IV~~~~  245 (252)
                      |||+. ++|.++.        ..+++..+..++.|++.||+|||+. ||+|++.
T Consensus        82 ~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dl  134 (288)
T cd06616          82 MELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDV  134 (288)
T ss_pred             Eeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCC
Confidence            99997 4554432        4589999999999999999999974 9999854

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.71  E-value=5.2e-17  Score=141.36  Aligned_cols=106  Identities=13%  Similarity=0.108  Sum_probs=92.2

Q ss_pred             CceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCCHHh
Q 025443          137 KYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV  211 (252)
Q Consensus       137 ~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~  211 (252)
                      ++|.||.++...+++.||+|+++..     ..+.+.+|+++++.++ |+||+++++++.+++.  .+++|||+++|+|.+
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~--~~~~~e~~~~~~l~~   88 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSE--LYVVSPLMAYGSCED   88 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcC-CcchhhhhheeecCCe--EEEEEeccCCCCHHH
Confidence            4456666666669999999998643     2467899999999999 9999999999998866  999999999999999


Q ss_pred             Hc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          212 LY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       212 ~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++     ..+++..++.++.|+++||+|||++||||.+.
T Consensus        89 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dl  127 (314)
T cd08216          89 LLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSV  127 (314)
T ss_pred             HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            98     35889999999999999999999999999743

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.71  E-value=1.1e-18  Score=159.69  Aligned_cols=119  Identities=24%  Similarity=0.411  Sum_probs=109.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ..++|+.+.++|+|+||.||+++++.+++..|+|+++.+   ...-+++|+-+++.++ |+|||-|++.+.....  +||
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~-h~nivay~gsylr~dk--lwi   89 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDK--LWI   89 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCC-CcChHHHHhhhhhhcC--cEE
Confidence            467899999999999999999999999999999999864   3556789999999999 9999999999998876  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      .||||.||+|.+..   +.++|.++.+++++.++||+|||++|-+|=+
T Consensus        90 cMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRd  137 (829)
T KOG0576|consen   90 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRD  137 (829)
T ss_pred             EEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCccccc
Confidence            99999999999988   7899999999999999999999999976643

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.71  E-value=1.5e-16  Score=137.46  Aligned_cols=119  Identities=13%  Similarity=0.189  Sum_probs=102.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++.+.||+|+||.||+|.+..++..||||.++...    ...+..|+.++..+.+|+||+++++++.+...  .|+
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~--~~~   91 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD--VFI   91 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCe--EEE
Confidence            578999999999999999999998889999999997532    34566788877777669999999999998866  999


Q ss_pred             EecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          200 IFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      ||||+. ++|.+++    ..+++..+..++.||+.||.|||+ .||+|.+.
T Consensus        92 v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl  141 (296)
T cd06618          92 CMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDV  141 (296)
T ss_pred             EeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCC
Confidence            999996 5777776    458999999999999999999997 69998754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.70  E-value=9.7e-17  Score=139.74  Aligned_cols=118  Identities=20%  Similarity=0.293  Sum_probs=103.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ...|...+.||+|+||.||+|.+..++..+|+|.+...      ..+++.+|+++++.++ |+|++++++++.....  .
T Consensus        14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~   90 (308)
T cd06634          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHT--A   90 (308)
T ss_pred             HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCe--e
Confidence            35587888999999999999999999999999998632      1346778999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++||||+. |+|.+++    ..+++.++..++.|++.||.|||++||+|.+.
T Consensus        91 ~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl  141 (308)
T cd06634          91 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV  141 (308)
T ss_pred             EEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            99999997 6777766    45899999999999999999999999999843

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.70  E-value=5.5e-18  Score=164.41  Aligned_cols=119  Identities=21%  Similarity=0.313  Sum_probs=106.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .-+|.....||.|.||.||.|.+..+|...|+|.++-+.     .+.+.+|..+|..|+ |||+|++||+-...+.  ++
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~ln-HpNlV~YyGVEvHRek--v~ 1310 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLN-HPNLVRYYGVEVHREK--VY 1310 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhcc-CccccccCceeecHHH--HH
Confidence            346777889999999999999999999999999996432     456789999999999 9999999999988866  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |.||||+||+|.+++   +..+|...+.+..|++.|+.|||++||||-++
T Consensus      1311 IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDI 1360 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDI 1360 (1509)
T ss_pred             HHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCC
Confidence            999999999999999   45788888899999999999999999999754

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.70  E-value=4.8e-17  Score=148.31  Aligned_cols=118  Identities=19%  Similarity=0.305  Sum_probs=106.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      ..+.....+||-|.||.||.|.+++....||||.++...  .++|..|+.+|+.|. |||+|+|+|+|.....  +|||.
T Consensus       266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeik-HpNLVqLLGVCT~EpP--FYIiT  342 (1157)
T KOG4278|consen  266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTHEPP--FYIIT  342 (1157)
T ss_pred             chheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhc-CccHHHHhhhhccCCC--eEEEE
Confidence            345667789999999999999999999999999998654  678999999999999 9999999999998877  99999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||..|+|.+||     ..++.-.+..++.||..||+||..+++||-+
T Consensus       343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRD  390 (1157)
T KOG4278|consen  343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRD  390 (1157)
T ss_pred             ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence            999999999999     3466777889999999999999999998853

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.70  E-value=4.2e-16  Score=133.38  Aligned_cols=118  Identities=26%  Similarity=0.421  Sum_probs=99.1

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcC--CCCcceeeeeEEEcCCC---ce
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLC--GGPNVVKLLDIVRDQHS---KT  196 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~--~h~nIv~l~~~~~~~~~---~~  196 (252)
                      |++.+.||+|+||.||+|++..++..+|+|+++...     ...+.+|+.++++++  .|+||+++++++.+.+.   ..
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            678899999999999999998889999999996421     234667888887663  29999999999986542   24


Q ss_pred             eEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++++|||+. ++|.+++     ..+++..+..++.||+.||.|||++||+|.+.
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l  133 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDL  133 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence            899999997 5888887     24899999999999999999999999999844

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.69  E-value=6.4e-17  Score=147.70  Aligned_cols=118  Identities=20%  Similarity=0.276  Sum_probs=108.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .-|..++.||-|+||+|.++.-.+|...+|+|.+++.+      ...++.|-+||..-+ ++-||+||..|.+++.  +|
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD-n~WVVrLyySFQDkdn--LY  705 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDN--LY  705 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC-CcceEEEEEEeccCCc--eE
Confidence            45888999999999999999999999999999997643      345788999999998 9999999999999987  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||+.|||+..+|   +.|.|+.++.|+.++..|+++.|.+|+||-++
T Consensus       706 FVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDi  755 (1034)
T KOG0608|consen  706 FVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDI  755 (1034)
T ss_pred             EEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceeccc
Confidence            999999999999998   78999999999999999999999999999754

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.69  E-value=3.5e-17  Score=147.91  Aligned_cols=110  Identities=16%  Similarity=0.213  Sum_probs=96.8

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCC
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN  205 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~  205 (252)
                      ...-++.||+|+.|-||+|+.  .++.||||.++.    .-..+|+.|++|+ |+||+.|.|+|.....  +|||||||.
T Consensus       125 ~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~e----lkETdIKHLRkLk-H~NII~FkGVCtqsPc--yCIiMEfCa  195 (904)
T KOG4721|consen  125 EISELEWLGSGAQGAVFLGRL--HNETVAVKKVRE----LKETDIKHLRKLK-HPNIITFKGVCTQSPC--YCIIMEFCA  195 (904)
T ss_pred             HhhhhhhhccCcccceeeeec--cCceehhHHHhh----hhhhhHHHHHhcc-CcceeeEeeeecCCce--eEEeeeccc
Confidence            334467899999999999998  678899998853    2347899999999 9999999999998754  999999999


Q ss_pred             CCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          206 STDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       206 gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      .|-|...|   +.++...+..|..+|+.||.|||.+.|||-+
T Consensus       196 ~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRD  237 (904)
T KOG4721|consen  196 QGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRD  237 (904)
T ss_pred             cccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhc
Confidence            99999999   6789999999999999999999999888753

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.69  E-value=5.9e-16  Score=127.24  Aligned_cols=116  Identities=28%  Similarity=0.490  Sum_probs=104.9

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      |.+.+.||+|++|.||++.+..++..+|+|.+...    ..+.+.+|++.++.++ |+|++++++++.....  .++++|
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~--~~~v~e   77 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLK-HPNIVKLYGVFEDPEP--LYLVME   77 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCC-CCChhhheeeeecCCc--eEEEEe
Confidence            56778999999999999999888999999999754    4567889999999998 9999999999988765  999999


Q ss_pred             CCCCCCHHhHc---cC-CCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY---PT-LTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l---~~-l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+++++|.+++   .. +++..+..++.|++.+|.|||++|++|++.
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di  124 (225)
T smart00221       78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDL  124 (225)
T ss_pred             ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            99999999998   23 899999999999999999999999999843

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.68  E-value=3.5e-17  Score=144.38  Aligned_cols=115  Identities=22%  Similarity=0.345  Sum_probs=105.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .+.|..-++||+|+||.||-|+-+.||+.+|+|.+.+..      .....+|-.||.+++ .+.||.+-..|++++.  +
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~-s~FiVslaYAfeTkd~--L  260 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS-SPFIVSLAYAFETKDA--L  260 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc-cCcEEEEeeeecCCCc--e
Confidence            567889999999999999999999999999999996533      344789999999999 9999999999999977  9


Q ss_pred             EEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 025443          198 SLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTV  241 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV  241 (252)
                      |+||..|.||||.-+|     ..|++..++.|+.||+.||++||+.+||
T Consensus       261 ClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iV  309 (591)
T KOG0986|consen  261 CLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIV  309 (591)
T ss_pred             EEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhccee
Confidence            9999999999999998     3699999999999999999999999997

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.68  E-value=1.1e-16  Score=130.58  Aligned_cols=111  Identities=18%  Similarity=0.251  Sum_probs=87.3

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeeccch------------HH-----------------HHHHHHHHHhcCCCC
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK------------KK-----------------IKREIKILQNLCGGP  180 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~------------~~-----------------~~~Ei~il~~l~~h~  180 (252)
                      ...||+|+||.||+|.+. +|+.||||+++....            .+                 ..+|++++..+. ++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~   79 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA   79 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence            357999999999999996 899999999975311            11                 235999999998 77


Q ss_pred             cceeeeeEEEcCCCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHH-HHCCCeEEeee
Q 025443          181 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIF-IRWSTVLCYQS  246 (252)
Q Consensus       181 nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yL-H~~~IV~~~~~  246 (252)
                      ++....... ...   .+|||||++|+++...+   ..+++.++..++.|++.+|.|| |+.||||.+..
T Consensus        80 ~v~~p~~~~-~~~---~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlk  145 (190)
T cd05147          80 GIPCPEPIL-LKS---HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLS  145 (190)
T ss_pred             CCCCCcEEE-ecC---CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            765433332 222   48999999988776553   5789999999999999999999 79999998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10345 hypothetical protein; Provisional

Probab=99.68  E-value=4.7e-16  Score=128.47  Aligned_cols=111  Identities=17%  Similarity=0.215  Sum_probs=88.9

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcC----CCCcceeeeeEEEcCCC-ceeE-EE
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLC----GGPNVVKLLDIVRDQHS-KTPS-LI  200 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~----~h~nIv~l~~~~~~~~~-~~~~-lV  200 (252)
                      .+.||+|+||.||.  +..++.. +||++...   ..+.+.+|+++++.+.    .|+||++++|+++++.. +.++ +|
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            46899999999995  7667665 69998754   4567899999999993    27999999999998741 2334 78


Q ss_pred             ecC--CCCCCHHhHc--cCCCHHHHHHHHHHHHHHH-HHHHHCCCeEEee
Q 025443          201 FEY--VNSTDFKVLY--PTLTDYDIRYYIYELLKVM-SIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~--~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL-~yLH~~~IV~~~~  245 (252)
                      |||  +.+|+|.+++  ..+++.  ..++.|++.++ +|||+++|||.+.
T Consensus        84 ~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDl  131 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDNRIVTMEL  131 (210)
T ss_pred             ecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHCCEeecCC
Confidence            999  5579999999  345555  46788888888 9999999999864

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.68  E-value=6.9e-17  Score=132.90  Aligned_cols=122  Identities=16%  Similarity=0.165  Sum_probs=106.9

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec---cchHHHHHHHHHHHhcCCCCcceeeeeEEEc---CCCc
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP---VKKKKIKREIKILQNLCGGPNVVKLLDIVRD---QHSK  195 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~---~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~---~~~~  195 (252)
                      -..++|++.+.||+|||+.||++++..++..+|+|++.-   ++.+...+|++..++++ |||+++++++...   ++..
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~-s~~vl~l~dh~l~~~~D~~~   96 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFN-SPNVLRLVDHQLREEKDGKH   96 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhC-CcchHHHHHHHHHhhccCce
Confidence            447899999999999999999999999999999999953   44677899999999999 9999999987642   2335


Q ss_pred             eeEEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCC--CeEEe
Q 025443          196 TPSLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWS--TVLCY  244 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~--IV~~~  244 (252)
                      +.||++.|...|+|.+.+       ..++|.++..|+.+|++||++||+..  ..|.+
T Consensus        97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~D  154 (302)
T KOG2345|consen   97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRD  154 (302)
T ss_pred             eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccC
Confidence            699999999999999998       36899999999999999999999998  55554

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=2.2e-17  Score=145.59  Aligned_cols=115  Identities=23%  Similarity=0.414  Sum_probs=101.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----------KKKIKREIKILQNLCGGPNVVKLLDIVRDQH  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~  193 (252)
                      .++|-++..||+|||+.||+|.+...++.||||+-..++          .+...+|.+|.+.|. ||.||++|++|.-+.
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLD-HpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELD-HPRIVKLYDYFSLDT  540 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccC-cceeeeeeeeeeecc
Confidence            478999999999999999999999999999999874321          345789999999999 999999999998554


Q ss_pred             CceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          194 SKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       194 ~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                       ..+|-|+|||+|.||..+|   +.++|.+++.|+.||..||.||.+..-
T Consensus       541 -dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikp  589 (775)
T KOG1151|consen  541 -DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKP  589 (775)
T ss_pred             -ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCC
Confidence             4499999999999999999   568999999999999999999998753

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.67  E-value=4.4e-17  Score=150.12  Aligned_cols=117  Identities=18%  Similarity=0.227  Sum_probs=102.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC---cEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN---ERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .+..++.+.||+|.||.|++|.+..-+   ..||||+++..    ....|.+|+.+|.+|+ |+|+++|||+..++.   
T Consensus       109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~-H~hliRLyGvVl~qp---  184 (1039)
T KOG0199|consen  109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQ-HPHLIRLYGVVLDQP---  184 (1039)
T ss_pred             HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhcc-CcceeEEeeeeccch---
Confidence            355667789999999999999986533   35899999753    3678999999999999 999999999999843   


Q ss_pred             eEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          197 PSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      +.||||++++|+|.+.|     ..|-...++.|+.||+.||.||.+++.||-+
T Consensus       185 ~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRD  237 (1039)
T KOG0199|consen  185 AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRD  237 (1039)
T ss_pred             hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence            89999999999999999     3578889999999999999999999999854

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.67  E-value=4.6e-17  Score=157.30  Aligned_cols=120  Identities=20%  Similarity=0.249  Sum_probs=100.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCC------
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQH------  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~------  193 (252)
                      ..+|+.+..||+||||.||+++++-+|+.+|||+|....    ..++.+|+++|.+|+ |||||+||..|.+..      
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLn-HpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLN-HPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcC-CcceeeeehhhhccCCccccc
Confidence            356888899999999999999999999999999997542    456889999999999 999999997662100      


Q ss_pred             --------------------------------------------------------------------------------
Q 025443          194 --------------------------------------------------------------------------------  193 (252)
Q Consensus       194 --------------------------------------------------------------------------------  193 (252)
                                                                                                      
T Consensus       557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~  636 (1351)
T KOG1035|consen  557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS  636 (1351)
T ss_pred             cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -----------------------C--------ceeEEEecCCCCCCHHhHc--cCCC--HHHHHHHHHHHHHHHHHHHHC
Q 025443          194 -----------------------S--------KTPSLIFEYVNSTDFKVLY--PTLT--DYDIRYYIYELLKVMSIFIRW  238 (252)
Q Consensus       194 -----------------------~--------~~~~lV~E~~~gg~L~~~l--~~l~--~~~~~~i~~qi~~aL~yLH~~  238 (252)
                                             .        ..+||-||||+..+|.+++  +.+.  .+.++++++||++||.|+|++
T Consensus       637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~  716 (1351)
T KOG1035|consen  637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ  716 (1351)
T ss_pred             CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC
Confidence                                   0        1479999999988888888  4454  788899999999999999999


Q ss_pred             CCeEEe
Q 025443          239 STVLCY  244 (252)
Q Consensus       239 ~IV~~~  244 (252)
                      ||||=+
T Consensus       717 giIHRD  722 (1351)
T KOG1035|consen  717 GIIHRD  722 (1351)
T ss_pred             ceeecc
Confidence            988754

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.67  E-value=1.4e-16  Score=148.16  Aligned_cols=117  Identities=18%  Similarity=0.259  Sum_probs=106.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC---cEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN---ERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .....+.+.||.|.||.|++|..+..|   ..||||.++..    ....|..|+.||-+++ ||||++|.|+......  
T Consensus       628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd-HPNIIrLEGVVTks~P--  704 (996)
T KOG0196|consen  628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD-HPNIIRLEGVVTKSKP--  704 (996)
T ss_pred             hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC-CCcEEEEEEEEecCce--
Confidence            456778899999999999999987665   56999999853    3567999999999999 9999999999999877  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      +.||.|||++|+|..+|    +.|+.-++.-+++.|+.||+||-++|.||=
T Consensus       705 vMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHR  755 (996)
T KOG0196|consen  705 VMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHR  755 (996)
T ss_pred             eEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhh
Confidence            99999999999999999    679999999999999999999999999994

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.66  E-value=1.7e-15  Score=122.13  Aligned_cols=110  Identities=25%  Similarity=0.431  Sum_probs=100.8

Q ss_pred             eeecCceEEEEEEEcCCCcEEEEEEeeccch----HHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCC
Q 025443          133 VGRGKYSEVFEGINVNTNERCIIKILKPVKK----KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTD  208 (252)
Q Consensus       133 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~----~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~  208 (252)
                      ||+|++|.||++.+..++..+++|++.....    +.+.+|+++++.++ |++|+++++++.....  .+++|||++|++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~--~~~~~e~~~~~~   77 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN-HPNIVKLYGVFEDENH--LYLVMEYCEGGS   77 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCe--EEEEEecCCCCc
Confidence            6899999999999987899999999986543    68999999999999 9999999999998855  999999999999


Q ss_pred             HHhHc-c---CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          209 FKVLY-P---TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       209 L~~~l-~---~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |.+++ .   .+++..+..++.+++++|.|||++|++|.+.
T Consensus        78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl  118 (215)
T cd00180          78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDL  118 (215)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            99999 2   5899999999999999999999999999854

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.66  E-value=1.6e-16  Score=143.16  Aligned_cols=117  Identities=19%  Similarity=0.332  Sum_probs=99.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP-----VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ...|+++++||+||.+.||++..- +.+.+|+|.+..     .....+.+|+..|.+|+||.+||+||++-..++.  +|
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~--lY  436 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGY--LY  436 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCce--EE
Confidence            567999999999999999999884 445567666642     2256799999999999999999999999999866  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||||-+ .||..+|    ..+....++.|..|+++|+.++|+.|||||+
T Consensus       437 mvmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSD  485 (677)
T KOG0596|consen  437 MVMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSD  485 (677)
T ss_pred             EEeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecC
Confidence            9999765 8999999    2344458999999999999999999999995

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.65  E-value=5.1e-16  Score=134.44  Aligned_cols=118  Identities=22%  Similarity=0.298  Sum_probs=105.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCC-----CcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGG-----PNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h-----~nIv~l~~~~~~~~~~~  196 (252)
                      ..+|.+++.+|+|+||.|..|.+..++..||||+++.-  ..+...-|+++|.+|..+     -.+|++.+||...++  
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh--  165 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH--  165 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc--
Confidence            68999999999999999999999999999999999853  356678899999999522     258899999999977  


Q ss_pred             eEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          197 PSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      +|||+|.+ |.+++++|     ..++.+.++.+..|++++|+|||+.+++|.+
T Consensus       166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTD  217 (415)
T KOG0671|consen  166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTD  217 (415)
T ss_pred             eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecC
Confidence            99999999 47999999     3599999999999999999999999999984

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.65  E-value=7.3e-17  Score=141.21  Aligned_cols=116  Identities=20%  Similarity=0.251  Sum_probs=104.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..+|.++.+||+|+||+|.+++.+.+.+.+|||++++.      +.+--..|-++|.....-|.+++++.+|.+-+.  +
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR--L  425 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR--L  425 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh--e
Confidence            56899999999999999999999999999999999763      234456788888887767899999999999977  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTV  241 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV  241 (252)
                      |+||||+.||||.-.|   +++.|..+..|+.+|+-||-|||++||+
T Consensus       426 yFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIi  472 (683)
T KOG0696|consen  426 YFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGII  472 (683)
T ss_pred             eeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCee
Confidence            9999999999999888   7899999999999999999999999994

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.65  E-value=1e-16  Score=135.84  Aligned_cols=118  Identities=26%  Similarity=0.415  Sum_probs=102.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc----EEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE----RCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      ...|+.++.||+|+||.||+|....++.    .+|||.++.++     .....+|+.+++.|+ |+||+.|..+|...+ 
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~-h~nvi~Lv~Vfl~~d-  100 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELK-HPNVISLVKVFLSHD-  100 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhc-CCcchhHHHHHhccC-
Confidence            4679999999999999999997766543    68999997652     456889999999999 999999999998853 


Q ss_pred             ceeEEEecCCCCCCHHhHc--------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          195 KTPSLIFEYVNSTDFKVLY--------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l--------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      +.++|++||.+ -||..+|        +.++...++.|+.||+.|+.|||++=|+|-+
T Consensus       101 ~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRD  157 (438)
T KOG0666|consen  101 KKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRD  157 (438)
T ss_pred             ceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeecc
Confidence            56999999998 6898888        4589999999999999999999999888753

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=7e-16  Score=135.91  Aligned_cols=112  Identities=16%  Similarity=0.227  Sum_probs=100.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHh--cCCCCcceeeeeEEEcCCC--ceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQN--LCGGPNVVKLLDIVRDQHS--KTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~--l~~h~nIv~l~~~~~~~~~--~~~~l  199 (252)
                      .....+.+.||+|-||+||+|.+  .|..||||++...+++...+|.+|...  |+ |+||..|++.-..+..  ..+||
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE~SWfrEtEIYqTvmLR-HENILgFIaaD~~~~gs~TQLwL  286 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDERSWFRETEIYQTVMLR-HENILGFIAADNKDNGSWTQLWL  286 (513)
T ss_pred             hheeEEEEEecCccccceeeccc--cCCceEEEEecccchhhhhhHHHHHHHHHhc-cchhhhhhhccccCCCceEEEEE
Confidence            46788999999999999999999  688999999998888888899988876  68 9999999988765542  25999


Q ss_pred             EecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHC
Q 025443          200 IFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRW  238 (252)
Q Consensus       200 V~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~  238 (252)
                      |.||-+.|+|+|+|  ..++.+...+++..++.||++||..
T Consensus       287 vTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~e  327 (513)
T KOG2052|consen  287 VTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHME  327 (513)
T ss_pred             eeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHH
Confidence            99999999999999  6799999999999999999999964

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.64  E-value=1.7e-15  Score=123.38  Aligned_cols=110  Identities=15%  Similarity=0.145  Sum_probs=87.6

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------------------------hHHHHHHHHHHHhcCCCC
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------------------------KKKIKREIKILQNLCGGP  180 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------------------------~~~~~~Ei~il~~l~~h~  180 (252)
                      .+.||+|+||.||+|.+. +|+.||||+++...                             ...+.+|.+.+.++. ++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~   79 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-EA   79 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence            468999999999999986 89999999997531                             112357899999998 88


Q ss_pred             cceeeeeEEEcCCCceeEEEecCCCCCCHHhH-c--cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          181 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-Y--PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       181 nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~-l--~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      +|.....+....    .||||||++|+++... +  ..+++.++..++.|++.+|.+||+ +||+|.+.
T Consensus        80 ~i~~p~~~~~~~----~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDl  144 (190)
T cd05145          80 GVPVPEPILLKK----NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDL  144 (190)
T ss_pred             CCCCceEEEecC----CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence            875544443332    4899999998855433 3  467888999999999999999999 99999865

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.63  E-value=3.4e-16  Score=138.73  Aligned_cols=113  Identities=13%  Similarity=0.170  Sum_probs=99.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcC-CCCcceeeeeEEEcCC--CceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLC-GGPNVVKLLDIVRDQH--SKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~-~h~nIv~l~~~~~~~~--~~~~~lV  200 (252)
                      ....++.+.||+|.||.||+|..  +++.||||++..+..+.+.+|-+|.+... .|+||++|++.-+...  ...++||
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV  286 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV  286 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhc--cCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence            56677888999999999999998  67999999999888889999988887642 2999999999877543  2359999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHC
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRW  238 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~  238 (252)
                      +||.+.|+|.+||  ..++|...++++..+++||+|||+-
T Consensus       287 t~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee  326 (534)
T KOG3653|consen  287 TEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEE  326 (534)
T ss_pred             eeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhccc
Confidence            9999999999999  7899999999999999999999975

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=2.7e-16  Score=134.65  Aligned_cols=116  Identities=20%  Similarity=0.365  Sum_probs=106.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..+|.++..||.|+|++|.+++.+++.+.+|+|+++++      +.+-.+.|-.+......||.+|.|+.+|.+...  +
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr--l  326 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR--L  326 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce--E
Confidence            57899999999999999999999999999999999753      355678898899888779999999999999876  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTV  241 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV  241 (252)
                      ++|.||+.||||...+   ++++|+.++.+..+|+.||.|||++||+
T Consensus       327 ffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgii  373 (593)
T KOG0695|consen  327 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGII  373 (593)
T ss_pred             EEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCee
Confidence            9999999999999888   6799999999999999999999999994

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.61  E-value=5.9e-16  Score=144.81  Aligned_cols=115  Identities=17%  Similarity=0.230  Sum_probs=101.3

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCC----cEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTN----ERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~----~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..+..++||+|+||+||+|.+...|    .+||||++...    ...++..|+-+|.+++ |+|+++|++++....   +
T Consensus       697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masld-Hpnl~RLLgvc~~s~---~  772 (1177)
T KOG1025|consen  697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLD-HPNLLRLLGVCMLST---L  772 (1177)
T ss_pred             hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCC-CchHHHHhhhcccch---H
Confidence            3455688999999999999986554    46899998642    3567899999999999 999999999998875   8


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      .||++||++|.|.+++    ..+..++...|..||++||.|||.+++||-+
T Consensus       773 qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrd  823 (1177)
T KOG1025|consen  773 QLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRD  823 (1177)
T ss_pred             HHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhh
Confidence            8999999999999999    5789999999999999999999999999964

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.61  E-value=5.4e-15  Score=136.70  Aligned_cols=121  Identities=14%  Similarity=0.215  Sum_probs=91.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc----------------CCCcEEEEEEeeccc---h--------------HHHHHHH
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV----------------NTNERCIIKILKPVK---K--------------KKIKREI  170 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~----------------~~~~~vAvK~i~~~~---~--------------~~~~~Ei  170 (252)
                      .++|++.++||+|+||.||+|.+.                ..++.||||+++...   .              +....|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            678999999999999999999752                235679999986422   1              1234577


Q ss_pred             HHHHhcCCCCc-----ceeeeeEEEcCC------CceeEEEecCCCCCCHHhHcc-------------------------
Q 025443          171 KILQNLCGGPN-----VVKLLDIVRDQH------SKTPSLIFEYVNSTDFKVLYP-------------------------  214 (252)
Q Consensus       171 ~il~~l~~h~n-----Iv~l~~~~~~~~------~~~~~lV~E~~~gg~L~~~l~-------------------------  214 (252)
                      .++.+++ |.+     +++++++|....      ....||||||+++|+|.+++.                         
T Consensus       224 ~~l~~l~-~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        224 YMCAKIK-RNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHhh-cccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            7777777 554     467777765321      123899999999999988871                         


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          215 --TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       215 --~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        .+++..++.++.|++.||.|||++||+|.+.
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDL  335 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDI  335 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence              1245678899999999999999999999854

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.59  E-value=1.3e-15  Score=133.19  Aligned_cols=125  Identities=26%  Similarity=0.523  Sum_probs=114.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC---CCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN---TNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ...|..+++||+|+|+.||++.+..   .++.||+|.+... .-.++.+|+++|..+.|+.||+.+.+++..++.  .++
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~--v~i  112 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ--VAI  112 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCe--eEE
Confidence            4679999999999999999999877   7889999999754 467799999999999999999999999999977  999


Q ss_pred             EecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe---eeeccc
Q 025443          200 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCY---QSFLYI  250 (252)
Q Consensus       200 V~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~---~~~~~~  250 (252)
                      ||||++.-+..+++..++..+++.+++.++.||.++|.+||||=+   ..|+|.
T Consensus       113 vlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n  166 (418)
T KOG1167|consen  113 VLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYN  166 (418)
T ss_pred             EecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccc
Confidence            999999999999999999999999999999999999999999985   456664

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.58  E-value=1.1e-14  Score=119.88  Aligned_cols=120  Identities=18%  Similarity=0.315  Sum_probs=108.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      ...+|.++++||+|+||.+|+|....+|..||||+-... ...++..|.++.+.|++...|+.+..++.+...  -.|||
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y--nvlVM   90 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDY--NVLVM   90 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhcccccc--ceeee
Confidence            468899999999999999999999999999999987543 356788999999999988999999998888866  78999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |++ |.+|++++    +.|+-.++..++-|++.-++|+|.+++||-++
T Consensus        91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDI  137 (341)
T KOG1163|consen   91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDI  137 (341)
T ss_pred             ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccC
Confidence            999 69999998    78999999999999999999999999999643

>smart00090 RIO RIO-like kinase

Probab=99.57  E-value=9.3e-15  Score=123.15  Aligned_cols=115  Identities=13%  Similarity=0.124  Sum_probs=89.3

Q ss_pred             CeEEEeEeeecCceEEEEEE-EcCCCcEEEEEEeeccc---------------------------hHHHHHHHHHHHhcC
Q 025443          126 DYEVVRKVGRGKYSEVFEGI-NVNTNERCIIKILKPVK---------------------------KKKIKREIKILQNLC  177 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~-~~~~~~~vAvK~i~~~~---------------------------~~~~~~Ei~il~~l~  177 (252)
                      -|.+.+.||+|+||.||+|. +..+|+.||||+++...                           ...+.+|+.++.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            58888999999999999999 66789999999997431                           022568999999997


Q ss_pred             CCCcceeeeeEEEcCCCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCC-CeEEee
Q 025443          178 GGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWS-TVLCYQ  245 (252)
Q Consensus       178 ~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~-IV~~~~  245 (252)
                       +.+ +.+...+....   .+|||||++|++|...+   ..+.+..+..++.||+.+|.+||++| |+|++.
T Consensus       109 -~~~-i~~p~~~~~~~---~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Di  175 (237)
T smart00090      109 -EAG-VPVPKPIAWRR---NVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDL  175 (237)
T ss_pred             -hcC-CCCCeeeEecC---ceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCC
Confidence             532 22223333322   58999999998887665   34566677899999999999999999 999965

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.57  E-value=4.6e-14  Score=122.18  Aligned_cols=120  Identities=12%  Similarity=0.134  Sum_probs=90.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC---CcEEEEEEeeccch--------------HHHHHHHHHHHhcCCCCcceeee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT---NERCIIKILKPVKK--------------KKIKREIKILQNLCGGPNVVKLL  186 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~~--------------~~~~~Ei~il~~l~~h~nIv~l~  186 (252)
                      .++|++.+.||+|+||.||+|.+..+   +..+|+|+......              .....+...+..+. |+||++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-h~~i~~~~   89 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNID-HLGIPKYY   89 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCC-CCCCCcEE
Confidence            47899999999999999999998777   66778876532210              11223334455667 99999999


Q ss_pred             eEEEcCCCc--eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          187 DIVRDQHSK--TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       187 ~~~~~~~~~--~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +++......  ..+++||++. .++.+.+   ..+++..+..++.|++.||+|||++||+|++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDi  152 (294)
T PHA02882         90 GCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDI  152 (294)
T ss_pred             EeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            977654321  3578889875 4666665   45788999999999999999999999999864

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.56  E-value=2.6e-14  Score=118.25  Aligned_cols=106  Identities=26%  Similarity=0.456  Sum_probs=95.8

Q ss_pred             CceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCCHHhH
Q 025443          137 KYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL  212 (252)
Q Consensus       137 ~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~  212 (252)
                      +||.||+|.+..++..+|+|++....    .+.+.+|++.+++++ |+||+++++++.....  .+++|||+++++|.++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~--~~l~~e~~~~~~L~~~   77 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLK-HPNIVRLYDVFEDEDK--LYLVMEYCDGGDLFDL   77 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCC-CCcHHHHHhheeeCCE--EEEEEeCCCCCCHHHH
Confidence            58999999998889999999997543    578899999999998 9999999999988755  9999999999999999


Q ss_pred             c---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          213 Y---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       213 l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +   ..+++..+..++.+++++|.|||+.||+|...
T Consensus        78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i  113 (244)
T smart00220       78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDL  113 (244)
T ss_pred             HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCc
Confidence            8   33899999999999999999999999999854

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.56  E-value=2.3e-14  Score=134.84  Aligned_cols=121  Identities=14%  Similarity=0.219  Sum_probs=84.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCC----CcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEE----EcCCC
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNT----NERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIV----RDQHS  194 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~----~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~----~~~~~  194 (252)
                      ..++|++.+.||+|+||.||+|.+..+    +..||+|++......+...+.. +.... +.+++.+...+    .....
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~-l~~~~-~~~~~~~~~~~~~~~~~~~~  207 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNER-VRRAC-PNSCADFVYGFLEPVSSKKE  207 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHH-HHhhc-hhhHHHHHHhhhcccccccC
Confidence            367899999999999999999999888    8999999986533222111111 12222 22333222221    11122


Q ss_pred             ceeEEEecCCCCCCHHhHcc--CC---------------------CHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP--TL---------------------TDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~--~l---------------------~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ..++|||||+.+++|.+++.  .+                     .+..+..++.||+.||+|||++||||.+.
T Consensus       208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL  281 (566)
T PLN03225        208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV  281 (566)
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence            34999999999999999882  11                     13346689999999999999999999864

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.55  E-value=4.9e-16  Score=129.80  Aligned_cols=113  Identities=22%  Similarity=0.395  Sum_probs=100.4

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC---ceeEEEec
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS---KTPSLIFE  202 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~---~~~~lV~E  202 (252)
                      +.||-|+||.||.+.+..+|+.||+|.+..-     ..+++.+|+++|..++ |.|+...++.......   .++|+|.|
T Consensus        59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFqEiYV~TE  137 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQELYVLTE  137 (449)
T ss_pred             CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHHHHHHHHH
Confidence            6799999999999999999999999998642     3578899999999999 9999999998875542   24899999


Q ss_pred             CCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|. .||+.+|   +.++.+.++-++.||++||+|||+.||+|-++
T Consensus       138 LmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDI  182 (449)
T KOG0664|consen  138 LMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDI  182 (449)
T ss_pred             HHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccC
Confidence            996 8999999   78999999999999999999999999998754

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.55  E-value=1.9e-14  Score=123.12  Aligned_cols=115  Identities=15%  Similarity=0.284  Sum_probs=103.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEee-ccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-PVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~-~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .-.|+++++||+|+||.+++|.+.-+++.||||.-. +.+..++..|.+..+.|.+.++|++.|.+..+.-+  -.||||
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~--NiLVid  104 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKY--NILVID  104 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccch--hhhhhh
Confidence            457999999999999999999999999999999864 34567899999999999989999999988777754  789999


Q ss_pred             CCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 025443          203 YVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTV  241 (252)
Q Consensus       203 ~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV  241 (252)
                      ++ |.+|+|++    ++|+..++..++.|++.-++|+|+++.|
T Consensus       105 LL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LI  146 (449)
T KOG1165|consen  105 LL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLI  146 (449)
T ss_pred             hh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhccee
Confidence            99 68888887    7899999999999999999999999874

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.54  E-value=3.6e-14  Score=116.83  Aligned_cols=109  Identities=16%  Similarity=0.174  Sum_probs=90.7

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      +.||+|++|.||+|.+  +|..+++|+.....           ...+.+|+.++..+. +++|+....++.+...  .++
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~--~~l   76 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDPEN--FII   76 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeCCC--CEE
Confidence            5799999999999988  67789999865321           235778999999999 9988877777666654  899


Q ss_pred             EecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||++|++|.+++....+ ....++.+++.+|.+||+.||+|++.
T Consensus        77 v~e~~~G~~L~~~~~~~~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl  121 (211)
T PRK14879         77 VMEYIEGEPLKDLINSNGM-EELELSREIGRLVGKLHSAGIIHGDL  121 (211)
T ss_pred             EEEEeCCcCHHHHHHhccH-HHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            9999999999999844444 78899999999999999999999864

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.54  E-value=1.5e-16  Score=131.41  Aligned_cols=119  Identities=28%  Similarity=0.373  Sum_probs=101.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCC-----
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQH-----  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~-----  193 (252)
                      ...|+...+||+|.||.||+|+.+.+|+.||+|++--+.     -....+|+++|..|. |+|++.+++.+....     
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lk-Henv~nliEic~tk~Tp~~r   94 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKATPTNR   94 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhc-chhHHHHHHHHhhccCCccc
Confidence            567888899999999999999999999999999873221     345689999999999 999999998875322     


Q ss_pred             -CceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          194 -SKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       194 -~~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                       ...+||||++|+ -||..+|    .+++..++.+++.+++.||.|+|+..|+|-+
T Consensus        95 ~r~t~ylVf~~ce-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRD  149 (376)
T KOG0669|consen   95 DRATFYLVFDFCE-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRD  149 (376)
T ss_pred             ccceeeeeHHHhh-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhc
Confidence             235999999998 6888888    4699999999999999999999999998854

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.53  E-value=2.6e-14  Score=130.88  Aligned_cols=119  Identities=19%  Similarity=0.206  Sum_probs=104.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      ..+.|++...+|.|+|+.|..|.+..+++..++|++... .....+|+.++....+|+||+++++.+.++..  +|+|||
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~-~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~--~~~v~e  396 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR-ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKE--IYLVME  396 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheecccc-ccccccccchhhhhcCCCcceeecceecCCce--eeeeeh
Confidence            367888889999999999999999999999999999765 34456888888888889999999999999965  999999


Q ss_pred             CCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          203 YVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       203 ~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      ++.||.|.+.+  .+....++..|++||+.|+.|||++||||-+
T Consensus       397 ~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRD  440 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRD  440 (612)
T ss_pred             hccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecC
Confidence            99999998888  3344467888999999999999999999863

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.53  E-value=5.1e-14  Score=133.64  Aligned_cols=118  Identities=22%  Similarity=0.367  Sum_probs=102.8

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcC-------CCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVN-------TNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH  193 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~  193 (252)
                      ++..+.+.||+|+||.|++|....       ....||||.++..    ..+.+..|+++|+.+..|+||+.+.|++...+
T Consensus       296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~  375 (609)
T KOG0200|consen  296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG  375 (609)
T ss_pred             hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence            445666799999999999998431       1467999999753    35678999999999988999999999999976


Q ss_pred             CceeEEEecCCCCCCHHhHc--cC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          194 SKTPSLIFEYVNSTDFKVLY--PT-----------------LTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       194 ~~~~~lV~E~~~gg~L~~~l--~~-----------------l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      .  +++|+|||..|+|..++  .+                 ++..++..++.||+.||+||+++.+||.+
T Consensus       376 ~--~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRD  443 (609)
T KOG0200|consen  376 P--LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRD  443 (609)
T ss_pred             c--eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchh
Confidence            6  99999999999999999  45                 88999999999999999999999999975

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.52  E-value=1.1e-13  Score=115.37  Aligned_cols=115  Identities=10%  Similarity=0.093  Sum_probs=93.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hH---H------HHHHHHHHHhcCCCCcceeeeeEEEc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KK---K------IKREIKILQNLCGGPNVVKLLDIVRD  191 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~---~------~~~Ei~il~~l~~h~nIv~l~~~~~~  191 (252)
                      .++|+.++.||.|+||.||++.+  ++..+|+|++++..   ..   .      +.+|+..+.++. |++|+...+++..
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~-~~GI~~~~d~~~~  106 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR-SEGLASLNDFYLL  106 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-HCCCCcceEeeee
Confidence            58999999999999999999755  46689999996432   11   1      579999999999 9999999998764


Q ss_pred             CCC------ceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          192 QHS------KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       192 ~~~------~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ...      ...+|||||++|.+|.++. .+++    ....+++.+|..||+.||+|++..
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~-~~~~----~~~~~i~~~l~~lH~~gi~H~Dik  162 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMP-EISE----DVKAKIKASIESLHQHGMVSGDPH  162 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhh-hccH----HHHHHHHHHHHHHHHcCCccCCCC
Confidence            421      2379999999999998874 3333    346699999999999999999654

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.51  E-value=8.5e-15  Score=122.23  Aligned_cols=120  Identities=12%  Similarity=0.226  Sum_probs=105.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeee-EEEcCCCceeEE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLD-IVRDQHSKTPSL  199 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~-~~~~~~~~~~~l  199 (252)
                      ..+.|.+.+.||+|.||.+.+|+++.++..+++|.+...  ..+.|.+|...--.|.-|.||+.-|+ .|.+.+.  +.+
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~--YvF   99 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA--YVF   99 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCce--EEE
Confidence            357899999999999999999999999999999999754  36788999887777777999998776 5566654  899


Q ss_pred             EecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          200 IFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       200 V~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      +|||++-|||..-+  ..+.|...+.++.|++.||+|||++++||-+
T Consensus       100 ~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRd  146 (378)
T KOG1345|consen  100 VQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRD  146 (378)
T ss_pred             eeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcc
Confidence            99999999999999  5689999999999999999999999999963

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.50  E-value=1.9e-13  Score=120.27  Aligned_cols=117  Identities=17%  Similarity=0.213  Sum_probs=100.5

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCC-cEEEEEEeeccc---hHHHHHHHHHHHhcC---CCCcceeeeeEEE-cCCCcee
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTN-ERCIIKILKPVK---KKKIKREIKILQNLC---GGPNVVKLLDIVR-DQHSKTP  197 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~-~~vAvK~i~~~~---~~~~~~Ei~il~~l~---~h~nIv~l~~~~~-~~~~~~~  197 (252)
                      +|++.+.||+|+||.||+|.+..++ ..+|+|......   ...+..|+.++..+.   +..+++.+++.+. ....  -
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~--~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF--N   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce--e
Confidence            8999999999999999999997764 678999886542   226889999999997   2469999999995 5544  8


Q ss_pred             EEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+++ |.+|.++.     +.++..++..++.|++.+|++||+.|+||-++
T Consensus        97 ~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDi  148 (322)
T KOG1164|consen   97 FIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDI  148 (322)
T ss_pred             EEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCc
Confidence            9999988 68999988     57999999999999999999999999999754

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=1.8e-15  Score=135.29  Aligned_cols=115  Identities=18%  Similarity=0.286  Sum_probs=103.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..+++.+..||-|+||.|-++........+|+|++++.      ..+.+..|-.||..++ .+.||+||..|.+...  +
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~ky--v  495 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKY--V  495 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchh--h
Confidence            56788889999999999999988666666999999763      2556889999999999 9999999999999865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTV  241 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV  241 (252)
                      |+.||-|-||+|...|   +.|++..++.|+..+++|++|||++|||
T Consensus       496 YmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iI  542 (732)
T KOG0614|consen  496 YMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGII  542 (732)
T ss_pred             hhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCce
Confidence            9999999999999999   7899999999999999999999999995

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.48  E-value=1.3e-13  Score=123.90  Aligned_cols=124  Identities=19%  Similarity=0.291  Sum_probs=108.3

Q ss_pred             cccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCC-----CCcceeeeeEEEc
Q 025443          119 VQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCG-----GPNVVKLLDIVRD  191 (252)
Q Consensus       119 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~-----h~nIv~l~~~~~~  191 (252)
                      ++.....+|.+....|+|-||+|..|.+...|..||||+|+.+.  .+.=.+|++||++|++     .-|+++|+..|..
T Consensus       426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h  505 (752)
T KOG0670|consen  426 IGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH  505 (752)
T ss_pred             hhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence            33345689999999999999999999999999999999998765  3455789999999983     3589999999999


Q ss_pred             CCCceeEEEecCCCCCCHHhHcc------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          192 QHSKTPSLIFEYVNSTDFKVLYP------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       192 ~~~~~~~lV~E~~~gg~L~~~l~------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .++  +|||+|-+. -+|.++|+      .|....++.|+.|++.||..|-..||+||++
T Consensus       506 knH--LClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDI  562 (752)
T KOG0670|consen  506 KNH--LCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADI  562 (752)
T ss_pred             cce--eEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeeccc
Confidence            877  999999886 79999982      3778899999999999999999999999975

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.45  E-value=4.2e-13  Score=109.55  Aligned_cols=105  Identities=14%  Similarity=0.199  Sum_probs=82.2

Q ss_pred             EeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          132 KVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       132 ~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .||+|+||.||++..  ++..+++|......           ..++.+|++++..++ +.++.....++.+...  .+||
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~--~~lv   75 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDN--KTIV   75 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCC--CEEE
Confidence            379999999999985  67889999864211           245778999999998 7765554444445544  7999


Q ss_pred             ecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++|++|.+++.....    .++.|++.+|.+||+.||+|.+.
T Consensus        76 ~e~~~g~~l~~~~~~~~~----~~~~~i~~~l~~lH~~gi~H~Dl  116 (199)
T TIGR03724        76 MEYIEGKPLKDVIEEGND----ELLREIGRLVGKLHKAGIVHGDL  116 (199)
T ss_pred             EEEECCccHHHHHhhcHH----HHHHHHHHHHHHHHHCCeecCCC
Confidence            999999999988732111    88999999999999999999854

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.42  E-value=1.5e-12  Score=122.04  Aligned_cols=111  Identities=13%  Similarity=0.167  Sum_probs=88.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEee-c-c---------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-P-V---------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH  193 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~-~-~---------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~  193 (252)
                      ..|...+.||+|+||.||++.+...  .+++|+.. . .         ..+++.+|+++++.++ |++|+....++.+..
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~  409 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-RAGVPTPVIYDVDPE  409 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-ccCCCeeEEEEEeCC
Confidence            4456678999999999999988433  34444331 1 0         1245789999999999 999988777777665


Q ss_pred             CceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          194 SKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       194 ~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .  .+|||||++|++|.+++.     ....++.|++++|.|||++||+|.+.
T Consensus       410 ~--~~lv~E~~~g~~L~~~l~-----~~~~~~~~i~~~L~~lH~~giiHrDl  454 (535)
T PRK09605        410 E--KTIVMEYIGGKDLKDVLE-----GNPELVRKVGEIVAKLHKAGIVHGDL  454 (535)
T ss_pred             C--CEEEEEecCCCcHHHHHH-----HHHHHHHHHHHHHHHHHhCCCccCCC
Confidence            4  789999999999999874     46789999999999999999999864

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.39  E-value=3e-12  Score=105.12  Aligned_cols=105  Identities=14%  Similarity=0.104  Sum_probs=84.6

Q ss_pred             EEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          129 VVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       129 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      +...|++|+||+|+++..  .+..++.+.+....       ...+.+|+++|++|.++++|++++++    +.  .+++|
T Consensus         6 ~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~--~~lvm   77 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DG--RHLDR   77 (218)
T ss_pred             cceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cC--EEEEE
Confidence            457899999999997766  67778877775432       22578999999999857899999986    22  79999


Q ss_pred             cCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||+.|.+|.+.+..   . ...++.|++.+|++||++||||.+.
T Consensus        78 eyI~G~~L~~~~~~---~-~~~~~~qi~~~L~~lH~~GIvHrDL  117 (218)
T PRK12274         78 SYLAGAAMYQRPPR---G-DLAYFRAARRLLQQLHRCGVAHNDL  117 (218)
T ss_pred             eeecCccHHhhhhh---h-hHHHHHHHHHHHHHHHHCcCccCCC
Confidence            99999999765421   1 2468899999999999999999987

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.39  E-value=1.1e-12  Score=105.93  Aligned_cols=117  Identities=15%  Similarity=0.253  Sum_probs=100.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec----cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP----VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~----~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .+....+..||+|++|.|-+-++..+|...|+|.++.    +..+++.+|+++..+...+|.+|.|||.+...+.  +||
T Consensus        45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd--vwI  122 (282)
T KOG0984|consen   45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD--VWI  122 (282)
T ss_pred             hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc--EEE
Confidence            3556667889999999999999999999999999963    3356788999998888779999999998888866  999


Q ss_pred             EecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHC-CCeEE
Q 025443          200 IFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRW-STVLC  243 (252)
Q Consensus       200 V~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~-~IV~~  243 (252)
                      .||.|+ .+|..+.       +.++|..+-+|+..++.||.|||++ +|+|-
T Consensus       123 cME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHR  173 (282)
T KOG0984|consen  123 CMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHR  173 (282)
T ss_pred             eHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhc
Confidence            999997 6887775       5789999999999999999999985 55443

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.37  E-value=5.1e-13  Score=125.54  Aligned_cols=112  Identities=19%  Similarity=0.192  Sum_probs=94.7

Q ss_pred             EEEeEeeecCceE-EEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          128 EVVRKVGRGKYSE-VFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       128 ~~~~~lG~G~fg~-V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      .-.+.+|.|+-|+ ||+|..  .|+.||||++-.+....+.+||..|+.-+.|+|||++|+.-.+...  .||..|+|. 
T Consensus       512 ~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF--~YIalELC~-  586 (903)
T KOG1027|consen  512 SPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQF--LYIALELCA-  586 (903)
T ss_pred             ccHHHcccCCCCcEEEEEee--CCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCce--EEEEehHhh-
Confidence            3346688888754 899999  7889999999877778889999999999999999999998888866  999999997 


Q ss_pred             CCHHhHccC-------CCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          207 TDFKVLYPT-------LTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       207 g~L~~~l~~-------l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      .+|.+++..       ...-+.+.++.|++.||++||+.+|||=+
T Consensus       587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRD  631 (903)
T KOG1027|consen  587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRD  631 (903)
T ss_pred             hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhccccccc
Confidence            799999922       11134578999999999999999999953

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.35  E-value=3.6e-12  Score=104.31  Aligned_cols=108  Identities=16%  Similarity=0.234  Sum_probs=84.5

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-------------------------hHHHHHHHHHHHhcCCCCc
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-------------------------KKKIKREIKILQNLCGGPN  181 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------------------------~~~~~~Ei~il~~l~~h~n  181 (252)
                      |.+.+.||+|+||.||++.+ .+|+.||||+++...                         .....+|+.++..+. +.+
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~   94 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EEG   94 (198)
T ss_pred             hhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-HcC
Confidence            77789999999999999988 479999999876421                         113578999999997 663


Q ss_pred             --ceeeeeEEEcCCCceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          182 --VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       182 --Iv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        ++..++    ...  .++||||++|++|..+...   .....++.+++.++.++|++||+|.+.
T Consensus        95 i~v~~~~~----~~~--~~lv~e~~~g~~L~~~~~~---~~~~~~~~~i~~~l~~lh~~gi~H~Dl  151 (198)
T cd05144          95 FPVPKPID----WNR--HAVVMEYIDGVELYRVRVL---EDPEEVLDEILEEIVKAYKHGIIHGDL  151 (198)
T ss_pred             CCCCceee----cCC--ceEEEEEeCCcchhhcccc---ccHHHHHHHHHHHHHHHHHCCCCcCCC
Confidence              444443    222  6899999999999876531   456789999999999999999999854

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.33  E-value=3.1e-13  Score=112.66  Aligned_cols=117  Identities=12%  Similarity=0.233  Sum_probs=98.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++.+-+..||.|+||+|++-.++.+|+.+|||+|+..    ..+++..|.+...+-...||||++||.....+.  .||
T Consensus        63 ~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd--cWi  140 (361)
T KOG1006|consen   63 SDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD--CWI  140 (361)
T ss_pred             cchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc--eee
Confidence            34566678899999999999999999999999999753    256788898877766669999999998887765  899


Q ss_pred             EecCCCCCCHHhHc--------cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEE
Q 025443          200 IFEYVNSTDFKVLY--------PTLTDYDIRYYIYELLKVMSIFIR-WSTVLC  243 (252)
Q Consensus       200 V~E~~~gg~L~~~l--------~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~  243 (252)
                      .||+|+ .+|..+.        ..++|.-+..|...+..||.||-. ..|+|-
T Consensus       141 CMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHR  192 (361)
T KOG1006|consen  141 CMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHR  192 (361)
T ss_pred             eHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhc
Confidence            999997 6777665        469999999999999999999975 566664

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.31  E-value=4.9e-12  Score=106.00  Aligned_cols=118  Identities=13%  Similarity=0.176  Sum_probs=99.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++.+.+..||+|+-|+|+++..+.+|..+|||.+...    ..+++...++++....++|+||+.+|+|..+..  ++|
T Consensus        91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d--V~I  168 (391)
T KOG0983|consen   91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD--VFI  168 (391)
T ss_pred             hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch--HHH
Confidence            45667778899999999999999999999999999653    356788888888887779999999999999876  999


Q ss_pred             EecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEe
Q 025443          200 IFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCY  244 (252)
Q Consensus       200 V~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~  244 (252)
                      .||.|. .-++.++    +.++|.-+-++..-++.||.||-+ +||+|-+
T Consensus       169 cMelMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRD  217 (391)
T KOG0983|consen  169 CMELMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRD  217 (391)
T ss_pred             HHHHHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecc
Confidence            999985 3444444    679999999999999999999986 6887754

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.31  E-value=1.4e-12  Score=111.10  Aligned_cols=119  Identities=18%  Similarity=0.300  Sum_probs=103.8

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC--
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP-----VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS--  194 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~--  194 (252)
                      ....+|.-++.+|.|+- .|..+.+...++.||+|.+..     ...++..+|..++..++ |+||++++.+|.....  
T Consensus        14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~-~~nii~l~n~ftP~~~l~   91 (369)
T KOG0665|consen   14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVN-HKNIISLLNVFTPQKTLE   91 (369)
T ss_pred             eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhc-ccceeeeeeccCccccHH
Confidence            34578999999999998 788899999999999999843     23677899999999999 9999999999975532  


Q ss_pred             --ceeEEEecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          195 --KTPSLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       195 --~~~~lV~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                        ..+|+|||||+ ++|...+ ..++-+.+..|+.|++.|++|||+.||+|=
T Consensus        92 ~~~e~y~v~e~m~-~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihR  142 (369)
T KOG0665|consen   92 EFQEVYLVMELMD-ANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHR  142 (369)
T ss_pred             HHHhHHHHHHhhh-hHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeec
Confidence              34899999998 7888888 678999999999999999999999999885

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.28  E-value=1.1e-10  Score=99.34  Aligned_cols=113  Identities=27%  Similarity=0.469  Sum_probs=99.5

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCC-cceeeeeEEEcCCCceeEE
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGP-NVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~-nIv~l~~~~~~~~~~~~~l  199 (252)
                      |.+.+.||.|+||.||++.+.   ..+++|.+...      ....+.+|+.++..+. |+ +|+.+++.+.....  .++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~i~~~~~~~~~~~~--~~~   75 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLN-HPPNIVKLYDFFQDEGS--LYL   75 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHcc-CCcceeeEEEEEecCCE--EEE
Confidence            778899999999999999996   77899999642      2556899999999999 77 79999999977654  899


Q ss_pred             EecCCCCCCHHhHc--c----CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY--P----TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l--~----~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++|++.++++.+++  .    .+.+.....++.|++.+++|+|++|++|.+.
T Consensus        76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~  127 (384)
T COG0515          76 VMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDI  127 (384)
T ss_pred             EEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            99999999999777  2    6899999999999999999999999998754

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.21  E-value=3.9e-11  Score=96.85  Aligned_cols=108  Identities=19%  Similarity=0.297  Sum_probs=76.3

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHH----------------------HHHHHHHHHhcCCCCc-
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKK----------------------IKREIKILQNLCGGPN-  181 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~----------------------~~~Ei~il~~l~~h~n-  181 (252)
                      .+.||+|+||.||+|.+. +++.||||+++...     ...                      ...|...+..+. +.. 
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~~   79 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLY-EAGV   79 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHH-HcCC
Confidence            467999999999999985 78999999987532     111                      135666666665 332 


Q ss_pred             -ceeeeeEEEcCCCceeEEEecCCCCCCHHhH-ccCCCH-HHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          182 -VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTD-YDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       182 -Iv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~-l~~l~~-~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                       +.+.+++    ..  .+|||||++|+++... +..... ..+..++.+++.++.++|+ +||+|.+.
T Consensus        80 ~~~~~~~~----~~--~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl  141 (187)
T cd05119          80 PVPKPIDL----NR--HVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDL  141 (187)
T ss_pred             CCCceEec----CC--CEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCC
Confidence             3444432    12  6899999998554322 222222 6788999999999999999 99999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.21  E-value=2.4e-11  Score=118.20  Aligned_cols=119  Identities=14%  Similarity=0.288  Sum_probs=93.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcC--CCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLC--GGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~--~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .+.|.+.+.||+|+||+||+|.+.. |+.||+|+-++...-+|.-=.+++.+|+  --+.|..+...+...+.  -+||+
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~--S~lv~  773 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNA--SVLVS  773 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCc--ceeee
Confidence            4679999999999999999999966 9999999987654222222222233332  02455666666666655  78999


Q ss_pred             cCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||.+.|+|.+++   +.++|..+..+..|++.-|+.||..+|||.++
T Consensus       774 ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDi  820 (974)
T KOG1166|consen  774 EYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDI  820 (974)
T ss_pred             eccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccC
Confidence            999999999999   57999999999999999999999999999975

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.20  E-value=3.6e-11  Score=105.17  Aligned_cols=120  Identities=14%  Similarity=0.241  Sum_probs=99.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC-----cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN-----ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      ..+++....+.+|.||.||.|++.+..     +.|-+|.++...    ...+..|-..+..+. |+|+....++..++. 
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~s-H~nll~V~~V~ie~~-  360 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGAS-HPNLLSVLGVSIEDY-  360 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCc-CCCccceeEEEeecc-
Confidence            467888899999999999999876432     335566665432    456789999999999 999999999888765 


Q ss_pred             ceeEEEecCCCCCCHHhHc-----------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY-----------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l-----------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ...++++.++.-|+|..+|           +.++..++..++.|++.||+|||++||||.++
T Consensus       361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDi  422 (563)
T KOG1024|consen  361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDI  422 (563)
T ss_pred             CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchh
Confidence            4589999999999999998           35778888899999999999999999999864

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.18  E-value=1.1e-10  Score=89.57  Aligned_cols=108  Identities=16%  Similarity=0.160  Sum_probs=88.8

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCC-CcceeeeeEEEcCCCceeEEEecCCCCC
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-KKKIKREIKILQNLCGG-PNVVKLLDIVRDQHSKTPSLIFEYVNST  207 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~Ei~il~~l~~h-~nIv~l~~~~~~~~~~~~~lV~E~~~gg  207 (252)
                      ++.||+|.++.||++...  +..+++|...... ...+.+|+.+++.++.+ .+++++++++...+.  .+++|||++|+
T Consensus         3 ~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~--~~~v~e~~~g~   78 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTK--DEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGW--SYLLMEWIEGE   78 (155)
T ss_pred             ceecccccccceEEEEec--CCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCc--cEEEEEecCCe
Confidence            478999999999999983  3789999986543 35788999999999822 589999988877654  99999999988


Q ss_pred             CHHhHccCCCHHHHHHHHHHHHHHHHHHHHC---CCeEEee
Q 025443          208 DFKVLYPTLTDYDIRYYIYELLKVMSIFIRW---STVLCYQ  245 (252)
Q Consensus       208 ~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~---~IV~~~~  245 (252)
                      ++..+    +......++.+++++|++||..   +|+|.+.
T Consensus        79 ~~~~~----~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl  115 (155)
T cd05120          79 TLDEV----SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDL  115 (155)
T ss_pred             ecccC----CHHHHHHHHHHHHHHHHHHhCCCceEEEecCC
Confidence            87654    6677788999999999999985   6877643

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.12  E-value=5.2e-10  Score=94.41  Aligned_cols=109  Identities=11%  Similarity=0.151  Sum_probs=81.0

Q ss_pred             eEee-ecCceEEEEEEEcCCCcEEEEEEeecc----------------chHHHHHHHHHHHhcCCCCcc--eeeeeEEEc
Q 025443          131 RKVG-RGKYSEVFEGINVNTNERCIIKILKPV----------------KKKKIKREIKILQNLCGGPNV--VKLLDIVRD  191 (252)
Q Consensus       131 ~~lG-~G~fg~V~~~~~~~~~~~vAvK~i~~~----------------~~~~~~~Ei~il~~l~~h~nI--v~l~~~~~~  191 (252)
                      ..|| .|+.|+||.+..  .+..+++|+++..                ...++.+|+.++..|+ +++|  +..+++...
T Consensus        37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~~  113 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARVV  113 (239)
T ss_pred             ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeeee
Confidence            4577 788888998877  4778999988531                1245788999999998 8775  677776544


Q ss_pred             CCCc--eeEEEecCCCC-CCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          192 QHSK--TPSLIFEYVNS-TDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       192 ~~~~--~~~lV~E~~~g-g~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ....  ..+|||||++| .+|.+++  ..+++.    .+.||+.+|.+||++||+|.+..
T Consensus       114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~----~~~~i~~~l~~lH~~GI~HrDlk  169 (239)
T PRK01723        114 RHGLFYRADILIERIEGARDLVALLQEAPLSEE----QWQAIGQLIARFHDAGVYHADLN  169 (239)
T ss_pred             ecCcceeeeEEEEecCCCCCHHHHHhcCCCCHH----HHHHHHHHHHHHHHCCCCCCCCC
Confidence            3221  13599999997 6999888  344544    36789999999999999998643

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.85  E-value=9e-09  Score=94.22  Aligned_cols=110  Identities=15%  Similarity=0.206  Sum_probs=71.8

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccchHH-------------------------------------------HH
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK-------------------------------------------IK  167 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~-------------------------------------------~~  167 (252)
                      +.||+|++|.||+|+. .+|+.||||+.++...+.                                           +.
T Consensus       123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            5799999999999987 578999999997643222                                           33


Q ss_pred             HHHHHHHhcC----CCCcceeeeeEEEc-CCCceeEEEecCCCCCCHHhHcc--CCCHHHHHHHHHHHHH-HHHHHHHCC
Q 025443          168 REIKILQNLC----GGPNVVKLLDIVRD-QHSKTPSLIFEYVNSTDFKVLYP--TLTDYDIRYYIYELLK-VMSIFIRWS  239 (252)
Q Consensus       168 ~Ei~il~~l~----~h~nIv~l~~~~~~-~~~~~~~lV~E~~~gg~L~~~l~--~l~~~~~~~i~~qi~~-aL~yLH~~~  239 (252)
                      +|+..+.++.    ++++ +.+-..+.+ ...  -+|||||++|++|.++..  .... +...++.+++. .+..+|..|
T Consensus       202 ~Ea~n~~~~~~~~~~~~~-v~vP~v~~~~~~~--~vLvmE~i~G~~L~~~~~~~~~~~-~~~~ia~~~~~~~l~ql~~~g  277 (437)
T TIGR01982       202 REAANASELGENFKNDPG-VYVPEVYWDRTSE--RVLTMEWIDGIPLSDIAALDEAGL-DRKALAENLARSFLNQVLRDG  277 (437)
T ss_pred             HHHHHHHHHHHhcCCCCC-EEeCCEehhhcCC--ceEEEEeECCcccccHHHHHhcCC-CHHHHHHHHHHHHHHHHHhCC
Confidence            3444444432    1232 222222222 222  689999999999988761  1111 23456666666 478899999


Q ss_pred             CeEEee
Q 025443          240 TVLCYQ  245 (252)
Q Consensus       240 IV~~~~  245 (252)
                      ++|++.
T Consensus       278 ~~H~D~  283 (437)
T TIGR01982       278 FFHADL  283 (437)
T ss_pred             ceeCCC
Confidence            999864

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.76  E-value=2.3e-08  Score=79.14  Aligned_cols=104  Identities=11%  Similarity=0.070  Sum_probs=76.4

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCC
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST  207 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg  207 (252)
                      ++.|+.|.++.||++..  .+..+++|+.....  ...+.+|+.+++.+.+...+++++.+..+  .  .++||||++|.
T Consensus         3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~--~--~~lv~e~i~G~   76 (170)
T cd05151           3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPE--T--GVLITEFIEGS   76 (170)
T ss_pred             eeecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCC--C--CeEEEEecCCC
Confidence            46789999999999987  47789999986543  23467999999999733334566655432  2  57999999998


Q ss_pred             CHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC-----eEEe
Q 025443          208 DFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST-----VLCY  244 (252)
Q Consensus       208 ~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I-----V~~~  244 (252)
                      ++...     ......++.+++++|..||+.++     +|++
T Consensus        77 ~l~~~-----~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD  113 (170)
T cd05151          77 ELLTE-----DFSDPENLEKIAKLLKKLHSSPLPDLVPCHND  113 (170)
T ss_pred             ccccc-----cccCHHHHHHHHHHHHHHhCCCCCCceeecCC
Confidence            87653     11224567899999999999986     6664

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.73  E-value=7.6e-09  Score=96.42  Aligned_cols=36  Identities=17%  Similarity=0.444  Sum_probs=31.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV  161 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~  161 (252)
                      ..|+. +.||+|++|.||+|+.+.+|+.||||++++.
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            45665 7899999999999999878999999999754

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.73  E-value=5.9e-08  Score=79.85  Aligned_cols=109  Identities=19%  Similarity=0.275  Sum_probs=86.0

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCC-CcceeeeeEEEcCC-CceeEEEecCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGG-PNVVKLLDIVRDQH-SKTPSLIFEYV  204 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h-~nIv~l~~~~~~~~-~~~~~lV~E~~  204 (252)
                      +.||.|.++.||++... +|..+++|+.....    ...+.+|+++++.+..+ .++++++.+..... .+..++||||+
T Consensus         4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i   82 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV   82 (223)
T ss_pred             eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence            56899999999999873 35789999986532    45788999999999831 34577777665532 01378999999


Q ss_pred             CCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          205 NSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       205 ~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      +|+++.+.+  ..+++.+...++.+++++|..||+...
T Consensus        83 ~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~  120 (223)
T cd05154          83 DGRVLRDRLLRPELSPEERRALARALADTLAALHSVDP  120 (223)
T ss_pred             CCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCh
Confidence            999988876  468888999999999999999998764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.69  E-value=7.4e-09  Score=98.04  Aligned_cols=114  Identities=22%  Similarity=0.248  Sum_probs=90.9

Q ss_pred             EEEeEeeecCceEEEEEEEcCCCcEEEEEEee----ccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          128 EVVRKVGRGKYSEVFEGINVNTNERCIIKILK----PVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       128 ~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~----~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .....+|.|++|.|+.+........++.|..+    ...     ...+..|+.+-..+. |+|++.....+.+...  .+
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~-h~~~~e~l~~~~~~~~--~~  397 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLS-HPNIIETLDIVQEIDG--IL  397 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeeccccc-CCchhhhHHHHhhccc--ch
Confidence            44678999999988888887776666666543    211     122567788888898 9999888877766654  55


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      -+||||++ ||+.++   ..++..++..++.|++.||+|||++||-|++.
T Consensus       398 ~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Giahrdl  446 (601)
T KOG0590|consen  398 QSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDL  446 (601)
T ss_pred             hhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccC
Confidence            55999998 999999   27999999999999999999999999999864

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.65  E-value=2.3e-07  Score=75.82  Aligned_cols=110  Identities=18%  Similarity=0.298  Sum_probs=80.1

Q ss_pred             eEeeecCceEEEEEEEcC------CCcEEEEEEeeccc-------------------------hHH----HHHHHHHHHh
Q 025443          131 RKVGRGKYSEVFEGINVN------TNERCIIKILKPVK-------------------------KKK----IKREIKILQN  175 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~------~~~~vAvK~i~~~~-------------------------~~~----~~~Ei~il~~  175 (252)
                      ..||.|--+.||.|....      .+..+|||+.+...                         .+.    ..+|++.|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999998743      35789999985210                         111    3489999999


Q ss_pred             cCC-CCcceeeeeEEEcCCCceeEEEecCCCCCCHHh-Hc--cCCCHHHHHHHHHHHHHHHHHH-HHCCCeEEeee
Q 025443          176 LCG-GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV-LY--PTLTDYDIRYYIYELLKVMSIF-IRWSTVLCYQS  246 (252)
Q Consensus       176 l~~-h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~-~l--~~l~~~~~~~i~~qi~~aL~yL-H~~~IV~~~~~  246 (252)
                      +.. .-++++.+++   . .  -+|||||++++.+.. .+  ..+++.+...++.|++.+|..| |+.||||++-|
T Consensus        83 l~~~Gv~vP~pi~~---~-~--~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs  152 (197)
T cd05146          83 MQKAGIPCPEVVVL---K-K--HVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLS  152 (197)
T ss_pred             HHHcCCCCCeEEEe---c-C--CEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            873 2567777764   2 2  689999998654422 12  2355667788899999999999 89999999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.59  E-value=7.2e-09  Score=87.21  Aligned_cols=112  Identities=13%  Similarity=0.241  Sum_probs=93.0

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ....++.+|.+...|..|+|++.  |..++.|+++-.     ..+.|..|.-.|+-+. ||||..+++.+..+.+  +.+
T Consensus       190 ~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifs-hpnilpvlgacnsppn--lv~  264 (448)
T KOG0195|consen  190 SSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFS-HPNILPVLGACNSPPN--LVI  264 (448)
T ss_pred             hhhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeec-CCchhhhhhhccCCCC--ceE
Confidence            34455677888899999999994  445677877543     2467888988999998 9999999999999876  999


Q ss_pred             EecCCCCCCHHhHc-c----CCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 025443          200 IFEYVNSTDFKVLY-P----TLTDYDIRYYIYELLKVMSIFIRWSTV  241 (252)
Q Consensus       200 V~E~~~gg~L~~~l-~----~l~~~~~~~i~~qi~~aL~yLH~~~IV  241 (252)
                      |..||+-|+|+..| +    ..+..++.+++.++++|+.|||+..-+
T Consensus       265 isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~  311 (448)
T KOG0195|consen  265 ISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPM  311 (448)
T ss_pred             eeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchh
Confidence            99999999999999 1    267789999999999999999997543

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.59  E-value=1.5e-07  Score=87.71  Aligned_cols=104  Identities=18%  Similarity=0.307  Sum_probs=87.2

Q ss_pred             EEEEcCCCcEEEEEEeeccch---HHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCCHHhHccCCCHH
Q 025443          143 EGINVNTNERCIIKILKPVKK---KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY  219 (252)
Q Consensus       143 ~~~~~~~~~~vAvK~i~~~~~---~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l~~l~~~  219 (252)
                      .|..+.++.+|.|...+....   ....+-++-|+.++ ||||++|++.++..+.  +|||+|-+.  -|..+++.++..
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlR-HP~Il~yL~t~e~~~~--~ylvTErV~--Pl~~~lk~l~~~  104 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLR-HPNILSYLDTTEEEGT--LYLVTERVR--PLETVLKELGKE  104 (690)
T ss_pred             ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhcc-CchhhhhhhhhcccCc--eEEEeeccc--cHHHHHHHhHHH
Confidence            355667888898888875443   56778899999999 9999999999999876  999999995  788888788899


Q ss_pred             HHHHHHHHHHHHHHHHH-HCCCeEE--eeeecccC
Q 025443          220 DIRYYIYELLKVMSIFI-RWSTVLC--YQSFLYIN  251 (252)
Q Consensus       220 ~~~~i~~qi~~aL~yLH-~~~IV~~--~~~~~~~~  251 (252)
                      .+..-++||+.||.||| +.++||+  --+.+|+|
T Consensus       105 ~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn  139 (690)
T KOG1243|consen  105 EVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVN  139 (690)
T ss_pred             HHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEc
Confidence            99999999999999997 7899998  33456665

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.51  E-value=6.5e-08  Score=85.38  Aligned_cols=66  Identities=15%  Similarity=0.170  Sum_probs=57.2

Q ss_pred             CCCcceeeeeEEEcC-------------------------CCceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHH
Q 025443          178 GGPNVVKLLDIVRDQ-------------------------HSKTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLK  230 (252)
Q Consensus       178 ~h~nIv~l~~~~~~~-------------------------~~~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~  230 (252)
                      .|||||++.++|.+.                         ..+++|+||.-++ .+|++++  +..+....+-++.|+++
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLE  352 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLE  352 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHH
Confidence            499999999988542                         1257999999997 6999999  78899999999999999


Q ss_pred             HHHHHHHCCCeEEe
Q 025443          231 VMSIFIRWSTVLCY  244 (252)
Q Consensus       231 aL~yLH~~~IV~~~  244 (252)
                      |+.|||++||-|-+
T Consensus       353 av~hL~~hgvAhRD  366 (598)
T KOG4158|consen  353 AVTHLHKHGVAHRD  366 (598)
T ss_pred             HHHHHHHccchhhc
Confidence            99999999998754

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.45  E-value=1.8e-06  Score=69.23  Aligned_cols=117  Identities=15%  Similarity=0.125  Sum_probs=87.9

Q ss_pred             EEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          129 VVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       129 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .+..|-+|+-+.|+++.+  .|+.+.||.=...           ..++..+|+++|.++. --.|.--.=+|.+...  -
T Consensus        11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~--~   85 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYG--G   85 (229)
T ss_pred             cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCC--C
Confidence            456788999999999988  7888888764221           1456789999999987 5566554455656655  6


Q ss_pred             EEEecCCCC-CCHHhHc----cC-CCHHHHHHHHHHHHHHHHHHHHCCCeEEeeeeccc
Q 025443          198 SLIFEYVNS-TDFKVLY----PT-LTDYDIRYYIYELLKVMSIFIRWSTVLCYQSFLYI  250 (252)
Q Consensus       198 ~lV~E~~~g-g~L~~~l----~~-l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~~~~~  250 (252)
                      +|+|||++| .++.+++    .. ........++++|-+.+.-||..+|+|.+-|-++|
T Consensus        86 ~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNi  144 (229)
T KOG3087|consen   86 QIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNI  144 (229)
T ss_pred             eEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccce
Confidence            899999986 4777777    22 33333379999999999999999999998876553

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.45  E-value=1.4e-06  Score=75.03  Aligned_cols=120  Identities=18%  Similarity=0.223  Sum_probs=76.8

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec------cchHHHHHHHHHHHhcCC---------CCcceeeeeEEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP------VKKKKIKREIKILQNLCG---------GPNVVKLLDIVR  190 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~~~~~~~Ei~il~~l~~---------h~nIv~l~~~~~  190 (252)
                      .+.....||.|+|+.||.+.+..+|+.+|+|+.-.      ...+++++|.-....+.+         |-.++--++...
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            46778899999999999999999999999999842      124556666544444332         222333333222


Q ss_pred             c---------CC-Cc-----eeEEEecCCCCCCHHhHc------cCC---CHHHH-HHHHHHHHHHHHHHHHCCCeEEee
Q 025443          191 D---------QH-SK-----TPSLIFEYVNSTDFKVLY------PTL---TDYDI-RYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       191 ~---------~~-~~-----~~~lV~E~~~gg~L~~~l------~~l---~~~~~-~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      -         .. ..     ..+++|+-+. +||.+++      ...   ....+ ..+..|+++.+++||++||||.+.
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi  171 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI  171 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence            1         11 00     1478888885 8998887      122   12223 355699999999999999999965


Q ss_pred             e
Q 025443          246 S  246 (252)
Q Consensus       246 ~  246 (252)
                      +
T Consensus       172 ~  172 (288)
T PF14531_consen  172 K  172 (288)
T ss_dssp             S
T ss_pred             c
Confidence            3

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.42  E-value=1.5e-06  Score=79.33  Aligned_cols=102  Identities=16%  Similarity=0.209  Sum_probs=81.1

Q ss_pred             eEEEEEEEcCCCcEEEEEEeec---cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC--ceeEEEecCCCC-CCHHhH
Q 025443          139 SEVFEGINVNTNERCIIKILKP---VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS--KTPSLIFEYVNS-TDFKVL  212 (252)
Q Consensus       139 g~V~~~~~~~~~~~vAvK~i~~---~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~--~~~~lV~E~~~g-g~L~~~  212 (252)
                      .+.|++....+|..+++|++.-   ........-++.++++. |.|||.|.++|.....  ..+++|++|.++ ++|.++
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~-h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLC-HTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhc-cCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            6789999999999999999932   22223345578899999 9999999999873221  248999999975 677776


Q ss_pred             c------------------cCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 025443          213 Y------------------PTLTDYDIRYYIYELLKVMSIFIRWSTV  241 (252)
Q Consensus       213 l------------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV  241 (252)
                      .                  ...+|..++.|+.||..||.++|+.|.-
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLA  415 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLA  415 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCce
Confidence            5                  1367899999999999999999999863

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.35  E-value=6.7e-08  Score=89.25  Aligned_cols=109  Identities=21%  Similarity=0.345  Sum_probs=92.9

Q ss_pred             eeecCceEEEEEEE---cCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          133 VGRGKYSEVFEGIN---VNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       133 lG~G~fg~V~~~~~---~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      +|+|+||.|+++..   .+.|..+|+|++++..     ......|-.++..++.|+.+|+++..|..+..  .+++++|.
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~k--l~l~ld~~   79 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGK--LYLILDFL   79 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccc--hhHhhhhc
Confidence            79999999997653   3467889999987532     22456788899999889999999999999976  99999999


Q ss_pred             CCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          205 NSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       205 ~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      .||+|...+   ..+.+...+.+..+++.|++++|+.||++-
T Consensus        80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyr  121 (612)
T KOG0603|consen   80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYR  121 (612)
T ss_pred             ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHh
Confidence            999999998   568899999999999999999999999643

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.30  E-value=3e-07  Score=90.30  Aligned_cols=66  Identities=8%  Similarity=0.100  Sum_probs=53.4

Q ss_pred             C-CcceeeeeEEEcCC-----CceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          179 G-PNVVKLLDIVRDQH-----SKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       179 h-~nIv~l~~~~~~~~-----~~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      | .||.+++++|....     .+.++++|||++ ++|+++|    ..+++.++..|+.||++||.|||++||||++.
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl  106 (793)
T PLN00181         31 HIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV  106 (793)
T ss_pred             HHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence            5 57778888772211     123888899884 7999999    34899999999999999999999999999964

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.27  E-value=5.4e-06  Score=66.60  Aligned_cols=110  Identities=13%  Similarity=0.104  Sum_probs=78.3

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc-----------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV-----------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ..+++|+-+.++.+.+  -|..+.+|.=.+.           ...+..+|++++..+. --.|..-+=++.+...  ..|
T Consensus         2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~--~~I   76 (204)
T COG3642           2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDN--GLI   76 (204)
T ss_pred             chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCC--CEE
Confidence            3578899999999977  3444666653211           1345789999999987 4444443334445544  789


Q ss_pred             EecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeeeecc
Q 025443          200 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQSFLY  249 (252)
Q Consensus       200 V~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~~~~  249 (252)
                      +|||++|..|.+.+..-    ...+++.+-.-+.-||..||||.+-|-.+
T Consensus        77 ~me~I~G~~lkd~l~~~----~~~~~r~vG~~vg~lH~~givHGDLTtsN  122 (204)
T COG3642          77 VMEYIEGELLKDALEEA----RPDLLREVGRLVGKLHKAGIVHGDLTTSN  122 (204)
T ss_pred             EEEEeCChhHHHHHHhc----chHHHHHHHHHHHHHHhcCeecCCCccce
Confidence            99999999999888322    35678888888889999999999876543

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.18  E-value=5e-07  Score=88.32  Aligned_cols=113  Identities=16%  Similarity=0.244  Sum_probs=90.5

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      +|...+.||++.|=+|.+|++.  ...|+||++-+..       ..+...|++ ....+ +||++.+..+...+.  ..|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~--eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~-~pn~lPfqk~~~t~k--AAy   97 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDR--EGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMK-APNCLPFQKVLVTDK--AAY   97 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCC--CceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhc-CCcccchHHHHHhhH--HHH
Confidence            6888899999999999999983  3349999985432       233445555 44455 999999988877774  489


Q ss_pred             EEecCCCCCCHHhHc--c-CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY--P-TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l--~-~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||-+|.. -+|+|.|  + -+..-+-+.|+.||+.||.-+|..||.|.++
T Consensus        98 lvRqyvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDI  146 (1431)
T KOG1240|consen   98 LVRQYVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDI  146 (1431)
T ss_pred             HHHHHHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence            9999997 6999999  3 3567778899999999999999999999875

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.14  E-value=9.7e-06  Score=65.88  Aligned_cols=102  Identities=20%  Similarity=0.254  Sum_probs=68.0

Q ss_pred             EEEEEEEcCCCcEEEEEEeeccc-----------------------------hHHHHHHHHHHHhcCCC-CcceeeeeEE
Q 025443          140 EVFEGINVNTNERCIIKILKPVK-----------------------------KKKIKREIKILQNLCGG-PNVVKLLDIV  189 (252)
Q Consensus       140 ~V~~~~~~~~~~~vAvK~i~~~~-----------------------------~~~~~~Ei~il~~l~~h-~nIv~l~~~~  189 (252)
                      .||.|.. ..|..+|+|+.+...                             .....+|.+.|.++... -++++.+++.
T Consensus         1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            4899987 567899999985310                             22468999999999832 3677777552


Q ss_pred             EcCCCceeEEEecCCC--CCCHHhHc-cCCCHHHHHHHHHHHHHHHHH-HHHCCCeEEeeeec
Q 025443          190 RDQHSKTPSLIFEYVN--STDFKVLY-PTLTDYDIRYYIYELLKVMSI-FIRWSTVLCYQSFL  248 (252)
Q Consensus       190 ~~~~~~~~~lV~E~~~--gg~L~~~l-~~l~~~~~~~i~~qi~~aL~y-LH~~~IV~~~~~~~  248 (252)
                         .   -+|||||++  |..+..+. ..++..+...++.+++..+.. +|+.||||++.|-.
T Consensus        80 ---~---~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~  136 (188)
T PF01163_consen   80 ---R---NVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEY  136 (188)
T ss_dssp             ---T---TEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STT
T ss_pred             ---C---CEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChh
Confidence               2   479999998  65665544 233356778899999996666 57999999977643

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.06  E-value=2.3e-06  Score=78.86  Aligned_cols=119  Identities=13%  Similarity=0.043  Sum_probs=99.6

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEc-CCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINV-NTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ...+|..+..||.|.|+.|+.+... .++..+++|.+.+..     ...-..|+.+...+..|.++++++..|.....  
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~--  340 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ--  340 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc--
Confidence            3578899999999999999988765 678889999886432     22235677777777779999999988887765  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      .||-.|||+++++...+   ..+.+...+.+..|++.++.++|++.++|.
T Consensus       341 ~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~  390 (524)
T KOG0601|consen  341 GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHL  390 (524)
T ss_pred             ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcc
Confidence            78999999999988776   678999999999999999999999999997

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.96  E-value=0.00014  Score=62.35  Aligned_cols=106  Identities=10%  Similarity=-0.021  Sum_probs=73.6

Q ss_pred             EEEEEEEcCCCcEEEEEEeeccc----h----------HHHHHHHHHHHhcCCCCcc--eeeeeEEEcCC---CceeEEE
Q 025443          140 EVFEGINVNTNERCIIKILKPVK----K----------KKIKREIKILQNLCGGPNV--VKLLDIVRDQH---SKTPSLI  200 (252)
Q Consensus       140 ~V~~~~~~~~~~~vAvK~i~~~~----~----------~~~~~Ei~il~~l~~h~nI--v~l~~~~~~~~---~~~~~lV  200 (252)
                      .|++.+.  .|+.+.||......    .          ..+.+|...+..|. ..+|  +....+++...   ...-+||
T Consensus        37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~-~~GIptP~pVa~~e~~~~~~~~~s~LV  113 (268)
T PRK15123         37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLH-EVGVDTMTGVAFGERGSNPATRTSFII  113 (268)
T ss_pred             eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHH-HcCCCCCCeeEEEEecCCCccceeEEE
Confidence            3555544  56778888764322    1          13789999998885 3333  33444444321   1237899


Q ss_pred             ecCCCCC-CHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeeeec
Q 025443          201 FEYVNST-DFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQSFL  248 (252)
Q Consensus       201 ~E~~~gg-~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~~~  248 (252)
                      ||++++. +|.+++     ...++.....++.+++..+.-||+.||+|.+.+-.
T Consensus       114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~  167 (268)
T PRK15123        114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYIC  167 (268)
T ss_pred             EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChh
Confidence            9999976 798887     23556677899999999999999999999976543

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.93  E-value=4e-05  Score=61.22  Aligned_cols=105  Identities=16%  Similarity=0.170  Sum_probs=71.6

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCC
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN  205 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~  205 (252)
                      ..+.+.||+|++|.||+|.+  .|..+|+|+-+... ...+..|+++|..+.+----.++|.+..      .++.|||++
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~------~~i~me~i~   95 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGE------DFIRMEYID   95 (201)
T ss_pred             hhhhhhhhcccccEEEEeec--cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEech------hhhhhhhhc
Confidence            44567899999999999999  67789999876543 6789999999999984444456665543      345699999


Q ss_pred             CCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          206 STDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       206 gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      |-.|.++-...+.+.+..    +++.---|-..||-|.
T Consensus        96 G~~L~~~~~~~~rk~l~~----vlE~a~~LD~~GI~H~  129 (201)
T COG2112          96 GRPLGKLEIGGDRKHLLR----VLEKAYKLDRLGIEHG  129 (201)
T ss_pred             CcchhhhhhcccHHHHHH----HHHHHHHHHHhccchh
Confidence            988877652223333333    3344333445555443

>PRK10593 hypothetical protein; Provisional

Probab=97.93  E-value=0.00011  Score=63.97  Aligned_cols=109  Identities=8%  Similarity=0.101  Sum_probs=80.9

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCC--CcceeeeeEEEcCC-CceeEEEec
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGG--PNVVKLLDIVRDQH-SKTPSLIFE  202 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h--~nIv~l~~~~~~~~-~~~~~lV~E  202 (252)
                      -.-.+.||.|..+.||.... .++ .+.+|..+.. ....+.+|.+.|+.|.+.  -.+++.++++.+.. .+..+||||
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~-~~~-~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE   93 (297)
T PRK10593         16 LSRVECISEQPYAALWALYD-SQG-NPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLE   93 (297)
T ss_pred             hheeeecCCccceeEEEEEc-CCC-CEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEe
Confidence            34457899999999999865 233 4677875542 356889999999999743  46888998876531 123799999


Q ss_pred             CCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCC
Q 025443          203 YVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWS  239 (252)
Q Consensus       203 ~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~  239 (252)
                      +++|+++.+.  ..+......+..+++++|.-||+..
T Consensus        94 ~i~G~~~~~~--~~~~~~~~~l~~~l~~~La~LH~~~  128 (297)
T PRK10593         94 RLRGVSVEAP--ARTPERWEQLKDQIVEGLLAWHRID  128 (297)
T ss_pred             ccCCEecCCC--CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999888762  2345556778889999999999854

>PLN02876 acyl-CoA dehydrogenase

Probab=97.91  E-value=0.0001  Score=72.89  Aligned_cols=111  Identities=21%  Similarity=0.235  Sum_probs=81.4

Q ss_pred             EeEeeecCceEEEEEEEcCCC--cEEEEEEeecc----chHHHHHHHHHHHhcCCCCcc--eeeeeEEEcCC-CceeEEE
Q 025443          130 VRKVGRGKYSEVFEGINVNTN--ERCIIKILKPV----KKKKIKREIKILQNLCGGPNV--VKLLDIVRDQH-SKTPSLI  200 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~--~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nI--v~l~~~~~~~~-~~~~~lV  200 (252)
                      ++.++.|.++.+|+......+  ..+++|+....    ....+.+|+++|+.+..|.++  ++.+.++.+.. .+..|+|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            577899999999998764332  46788876432    235688999999999645554  78888776542 1237899


Q ss_pred             ecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          201 FEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       201 ~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      |||++|..+.+.. ..++..+...++.+++++|..||+...
T Consensus       123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~  163 (822)
T PLN02876        123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADV  163 (822)
T ss_pred             EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCc
Confidence            9999976554322 456778888999999999999998643

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.89  E-value=1.3e-05  Score=73.90  Aligned_cols=121  Identities=14%  Similarity=0.092  Sum_probs=100.8

Q ss_pred             CCCeEEEeEeee--cCceEEEEEEE--cCCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGR--GKYSEVFEGIN--VNTNERCIIKILKP-----VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~--G~fg~V~~~~~--~~~~~~vAvK~i~~-----~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      ...+.+.+.+|.  |.+|.||.+..  ..++..+|+|.-+.     .....-.+|+.-.++++.|+|.++.+..+++.+.
T Consensus       113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~  192 (524)
T KOG0601|consen  113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI  192 (524)
T ss_pred             hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence            356777889999  99999999887  78899999998431     1233446788888888889999999999998877


Q ss_pred             ceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHH----HHHHHHHCCCeEEeeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLK----VMSIFIRWSTVLCYQSF  247 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~----aL~yLH~~~IV~~~~~~  247 (252)
                        .||-+|+|. .+|..+.    ..+++..++.++.+...    ||.++|+.+|+|....+
T Consensus       193 --lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp  250 (524)
T KOG0601|consen  193 --LFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKP  250 (524)
T ss_pred             --ceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccch
Confidence              999999996 7888887    44888999999999999    99999999999986544

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.85  E-value=8e-05  Score=63.36  Aligned_cols=111  Identities=21%  Similarity=0.258  Sum_probs=82.1

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-------------------------hHHHHHHHHHHHhcCCC-C
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-------------------------KKKIKREIKILQNLCGG-P  180 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------------------------~~~~~~Ei~il~~l~~h-~  180 (252)
                      +.++..||-|--|.||.|.+. .|.++|||.=+...                         ....++|.++|.+|... -
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            455689999999999999984 68889999864210                         22468999999999732 2


Q ss_pred             cceeeeeEEEcCCCceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          181 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       181 nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .+++-+++      +...+||||++|-.|...  +++..+...++..|++-+.-+-..||||++-|
T Consensus       172 ~VP~P~~~------nRHaVvMe~ieG~eL~~~--r~~~en~~~il~~il~~~~~~~~~GiVHGDlS  229 (304)
T COG0478         172 KVPKPIAW------NRHAVVMEYIEGVELYRL--RLDVENPDEILDKILEEVRKAYRRGIVHGDLS  229 (304)
T ss_pred             CCCCcccc------ccceeeeehcccceeecc--cCcccCHHHHHHHHHHHHHHHHHcCccccCCc
Confidence            56666543      226899999998666554  23566677778888887777779999999643

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.82  E-value=0.00022  Score=58.73  Aligned_cols=105  Identities=17%  Similarity=0.315  Sum_probs=81.0

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCC-CcceeeeeEEEcCC-CceeEEEecCCCC
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGG-PNVVKLLDIVRDQH-SKTPSLIFEYVNS  206 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h-~nIv~l~~~~~~~~-~~~~~lV~E~~~g  206 (252)
                      ++.|+.|..+.||+.....  ..+++|..... ....+.+|..+++.+..+ ..+++++....... ....+++|++++|
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g   79 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG   79 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence            4689999999999998843  58999998765 456788999999988733 23567776543322 2237999999999


Q ss_pred             CCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCC
Q 025443          207 TDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWS  239 (252)
Q Consensus       207 g~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~  239 (252)
                      ..+..   ..+......++.++++.|.-||+..
T Consensus        80 ~~~~~---~~~~~~~~~~~~~~~~~l~~lh~~~  109 (239)
T PF01636_consen   80 RPLDD---ELSPEQRPELLRQLGRALAQLHQVP  109 (239)
T ss_dssp             EEHHH---TSTHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             ccccc---cccccccccccccchhhhhhccccc
Confidence            88887   5788889999999999999999873

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK09902 hypothetical protein; Provisional

Probab=97.74  E-value=0.00051  Score=56.70  Aligned_cols=109  Identities=15%  Similarity=0.138  Sum_probs=78.1

Q ss_pred             eeecCceEEEEEEEcCCCcEEEEEEee---------ccchHHHHHHHHHHHhcCCCCc--ceeee--eEEEcCCCceeEE
Q 025443          133 VGRGKYSEVFEGINVNTNERCIIKILK---------PVKKKKIKREIKILQNLCGGPN--VVKLL--DIVRDQHSKTPSL  199 (252)
Q Consensus       133 lG~G~fg~V~~~~~~~~~~~vAvK~i~---------~~~~~~~~~Ei~il~~l~~h~n--Iv~l~--~~~~~~~~~~~~l  199 (252)
                      -|.||-+-|+....  .|..+-+|.-.         +.....|.+|+..|..|. .-+  +++..  +....+....-+|
T Consensus        26 ~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~-~~GvPVP~pvf~~~~k~~~~~rA~L  102 (216)
T PRK09902         26 YRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELE-RAGVIVPKIVFGEAVKIEGEWRALL  102 (216)
T ss_pred             cCCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHH-HcCCCCCccceeeeeccCCceEEEE
Confidence            35678888888766  44568888865         223567999999999987 332  33333  2222333334789


Q ss_pred             EecCCCC-CCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          200 IFEYVNS-TDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       200 V~E~~~g-g~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |+|-++| -||.+++     .+.++.....++.+++..+.-||+.|+.|.+
T Consensus       103 VTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgd  153 (216)
T PRK09902        103 VTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGC  153 (216)
T ss_pred             EEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence            9997754 6888887     3456777789999999999999999999973

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.65  E-value=4.6e-06  Score=79.25  Aligned_cols=117  Identities=16%  Similarity=0.209  Sum_probs=95.9

Q ss_pred             CCeEEEeEeeecCceEEEEEEEc-CCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINV-NTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ..|.+.+.||+|+|+.|-..... .....+|+|.+....     ......|..+-+.+.+|.|++.+++.....+.  .+
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~--~~   97 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRS--YL   97 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcc--cc
Confidence            34667777999999999988874 345567788775321     34455688888888889999999999999877  99


Q ss_pred             EEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHH-HCCCeEE
Q 025443          199 LIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFI-RWSTVLC  243 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH-~~~IV~~  243 (252)
                      +++||.+||++++.+     ...+...+..++.|+..|+.|+| ..++.|-
T Consensus        98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~  148 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHR  148 (601)
T ss_pred             cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccC
Confidence            999999999999988     15778889999999999999999 8888764

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=97.58  E-value=9.2e-05  Score=68.12  Aligned_cols=65  Identities=18%  Similarity=0.214  Sum_probs=58.5

Q ss_pred             HHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          173 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       173 l~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      |+.+. |.|+.+|+|.+.++..  +++|.+||.-|+|.+.+    ..+++.-...++++|+.||+|||+--|
T Consensus         1 l~~l~-h~n~~~f~g~~~~~~~--~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i   69 (484)
T KOG1023|consen    1 LRQLD-HDNLNKFIGASVDGPE--MIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPI   69 (484)
T ss_pred             Ccccc-hhhhhhheeeEecCCc--eEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcc
Confidence            35677 9999999999999965  99999999999999999    457888888999999999999998877

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.54  E-value=0.00085  Score=56.13  Aligned_cols=102  Identities=17%  Similarity=0.246  Sum_probs=75.2

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCCCc--ceeeeeEEEcCCCceeEEEecCCCCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK-KKKIKREIKILQNLCGGPN--VVKLLDIVRDQHSKTPSLIFEYVNST  207 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~Ei~il~~l~~h~n--Iv~l~~~~~~~~~~~~~lV~E~~~gg  207 (252)
                      ..||+|..+.||+.    .+..+++|...... .....+|.++++.+. .-.  +++.+++..+.+.  ..+|||+++|.
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~-~~glpvP~~~~~~~~~~~--~glv~e~i~G~   79 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVF-SLGIPTPHPFDLVEDGGR--LGLIYELIVGK   79 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHH-HcCCCCCceEEEEecCCe--eeeeeeecCCc
Confidence            57899999999984    24457889876533 456789999999987 433  4677888777654  78999999986


Q ss_pred             C-HHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          208 D-FKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       208 ~-L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      + +...+ ..+......++.++++.+.-||+..+
T Consensus        80 ~~~~~~~-~~~~~~~~~l~~~la~~l~~lH~~~~  112 (226)
T TIGR02172        80 RSFSRII-SDNPSRLEEIAKIFAEMAKKLHSTKC  112 (226)
T ss_pred             cchhhhh-cCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence            4 33332 33455666788999999999998644

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.41  E-value=0.00099  Score=55.94  Aligned_cols=101  Identities=18%  Similarity=0.201  Sum_probs=73.9

Q ss_pred             EeeecCc-eEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCCHH
Q 025443          132 KVGRGKY-SEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFK  210 (252)
Q Consensus       132 ~lG~G~f-g~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~  210 (252)
                      .|-.|.. +.||+...  .+..+.+|+........+.+|+++++.+.++--+++++++....+.  .++|||+++|.+|.
T Consensus         5 ~~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~--~~lv~e~i~G~~l~   80 (244)
T cd05150           5 RVTEGQSGATVYRLDG--KNPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGSDDGR--AWLLTSAVPGVPAA   80 (244)
T ss_pred             ecCCCCCcCeEEEEcC--CCCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEecCCc--cEEEEEeeCCccHh
Confidence            3455555 78898865  3467888987654345678899999999756556788888776644  78999999988876


Q ss_pred             hHccCCCHHHHHHHHHHHHHHHHHHHHCC
Q 025443          211 VLYPTLTDYDIRYYIYELLKVMSIFIRWS  239 (252)
Q Consensus       211 ~~l~~l~~~~~~~i~~qi~~aL~yLH~~~  239 (252)
                      ....   ......++.|+.+.|.-||+..
T Consensus        81 ~~~~---~~~~~~~~~~l~~~l~~lH~i~  106 (244)
T cd05150          81 ALWE---ELEPERLVDALAEALRRLHALP  106 (244)
T ss_pred             Hhhc---ccCHHHHHHHHHHHHHHHhcCC
Confidence            5432   1233468889999999999864

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.41  E-value=1.4e-05  Score=69.29  Aligned_cols=100  Identities=16%  Similarity=0.228  Sum_probs=70.2

Q ss_pred             EEEEEEEcCCCcEEEEEEeeccc-------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC---ceeEEEecCCCCCCH
Q 025443          140 EVFEGINVNTNERCIIKILKPVK-------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS---KTPSLIFEYVNSTDF  209 (252)
Q Consensus       140 ~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~---~~~~lV~E~~~gg~L  209 (252)
                      .||++-+...|..|+.-.++...       .+....-.+-|-.+. |.|||+++.+|.+...   ....++.|||.-|+|
T Consensus        81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlv-HsnlvkfH~yw~d~K~~e~~rviFiteymssgs~  159 (458)
T KOG1266|consen   81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLV-HSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSL  159 (458)
T ss_pred             HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHH-HHHHHHHHHhhcccccccccceEEEEecccchhH
Confidence            46777776666666544442111       111111223344455 9999999999976432   247889999999999


Q ss_pred             HhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          210 KVLY-------PTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       210 ~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      .++|       ..+......+|+.||+.||.|||+..-
T Consensus       160 ~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P  197 (458)
T KOG1266|consen  160 KQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP  197 (458)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence            9999       357888889999999999999999753

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.27  E-value=0.0007  Score=63.19  Aligned_cols=107  Identities=17%  Similarity=0.145  Sum_probs=68.2

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc----------------------------------hH------HHHHHH
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK----------------------------------KK------KIKREI  170 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----------------------------------~~------~~~~Ei  170 (252)
                      +.||..+.|.|++|+.+. |+.||||+-++.-                                  .+      .|.+|+
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            579999999999999865 9999999986421                                  01      134444


Q ss_pred             HHHHhcCC---CCc------ceeeeeEEEcCCCceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHH
Q 025443          171 KILQNLCG---GPN------VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIR  237 (252)
Q Consensus       171 ~il~~l~~---h~n------Iv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~  237 (252)
                      +-..++++   |-+      |+++|..+...    -.|+||||+|.-+.++-    ..++...+...+.+...-+  |=.
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~----RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~q--If~  319 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTK----RVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQ--IFK  319 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehhhcCcc----eEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHH--HHh
Confidence            44333321   333      55555444333    57999999998777765    5567665555444443333  335


Q ss_pred             CCCeEEe
Q 025443          238 WSTVLCY  244 (252)
Q Consensus       238 ~~IV~~~  244 (252)
                      .|++||+
T Consensus       320 ~GffHaD  326 (538)
T KOG1235|consen  320 TGFFHAD  326 (538)
T ss_pred             cCCccCC
Confidence            6789984

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.16  E-value=0.0045  Score=50.77  Aligned_cols=107  Identities=16%  Similarity=0.141  Sum_probs=76.7

Q ss_pred             CCeEEEeEeeecCc-eEEEEEEEcCCCcEEEEEEeec---c---------------------chHHHHHHHHHHHhcCC-
Q 025443          125 DDYEVVRKVGRGKY-SEVFEGINVNTNERCIIKILKP---V---------------------KKKKIKREIKILQNLCG-  178 (252)
Q Consensus       125 ~~y~~~~~lG~G~f-g~V~~~~~~~~~~~vAvK~i~~---~---------------------~~~~~~~Ei~il~~l~~-  178 (252)
                      .+++.++.||.|.- |.||+++.  .|+.+|+|+.+.   .                     ...-|..|.+...+|+. 
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            67999999999999 99999998  788999999421   0                     01247788888877762 


Q ss_pred             -CCcc--eeeeeEEEcCC----------------CceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCC
Q 025443          179 -GPNV--VKLLDIVRDQH----------------SKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWS  239 (252)
Q Consensus       179 -h~nI--v~l~~~~~~~~----------------~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~  239 (252)
                       +.++  |+.+||+.-..                ....-||.||.....          .....=+.+|.+-|..+|..|
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~~~~~~~~dl~~~~k~g  184 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIRDIPQMLRDLKILHKLG  184 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchhHHHHHHHHHHHHHHCC
Confidence             4455  99999985321                112467888776433          122344566777888999999


Q ss_pred             CeEE
Q 025443          240 TVLC  243 (252)
Q Consensus       240 IV~~  243 (252)
                      |+.-
T Consensus       185 I~~~  188 (207)
T PF13095_consen  185 IVPR  188 (207)
T ss_pred             eeec
Confidence            9876

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.14  E-value=0.002  Score=60.24  Aligned_cols=29  Identities=14%  Similarity=0.366  Sum_probs=26.0

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeec
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKP  160 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~  160 (252)
                      ..|+.++-|.||+|+.. +|+.||||+.++
T Consensus       131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrP  159 (517)
T COG0661         131 EPIASASIAQVHRAVLK-SGEEVAVKVQRP  159 (517)
T ss_pred             CchhhhhHhhheeEEec-CCCEEEEEecCC
Confidence            57999999999999994 599999999975

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.96  E-value=0.0006  Score=67.22  Aligned_cols=84  Identities=20%  Similarity=0.281  Sum_probs=56.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      ..+|..++.|..|+||-||+++++.+.+.+|+|+ +++..  +.+-  |+.... +                 .+.|   
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l--ilRn--ilt~a~-n-----------------pfvv---  135 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL--ILRN--ILTFAG-N-----------------PFVV---  135 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhcc-cccch--hhhc--cccccC-C-----------------ccee---
Confidence            4679999999999999999999999999999954 32211  0000  121221 3                 3333   


Q ss_pred             CCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          204 VNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       204 ~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                         ||-..++   +.++.+-        +.+++|||+.||||++
T Consensus       136 ---gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrd  168 (1205)
T KOG0606|consen  136 ---GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRD  168 (1205)
T ss_pred             ---chhhhhcccCCCCcchh--------hHHhHhhccCCeecCC
Confidence               4444444   3444333        7899999999999995

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.96  E-value=0.0057  Score=50.26  Aligned_cols=83  Identities=17%  Similarity=0.139  Sum_probs=62.5

Q ss_pred             hHHHHHHHHHHHhcCCCCc--ceeeeeEEEcCC--CceeEEEecCCCC-CCHHhHcc---CCCHHHHHHHHHHHHHHHHH
Q 025443          163 KKKIKREIKILQNLCGGPN--VVKLLDIVRDQH--SKTPSLIFEYVNS-TDFKVLYP---TLTDYDIRYYIYELLKVMSI  234 (252)
Q Consensus       163 ~~~~~~Ei~il~~l~~h~n--Iv~l~~~~~~~~--~~~~~lV~E~~~g-g~L~~~l~---~l~~~~~~~i~~qi~~aL~y  234 (252)
                      ..+..+|...+..|. ..+  .++.+.+.+...  ....+||+|+++| -+|.+++.   ..+......++.+++..+.-
T Consensus        55 ~~ra~~E~~~~~~L~-~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~  133 (206)
T PF06293_consen   55 RSRAKREWRNLQRLR-EAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAK  133 (206)
T ss_pred             chHHHHHHHHHHHHH-HcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHH
Confidence            346788999888876 333  345555555422  1236899999997 47999883   36778888999999999999


Q ss_pred             HHHCCCeEEeee
Q 025443          235 FIRWSTVLCYQS  246 (252)
Q Consensus       235 LH~~~IV~~~~~  246 (252)
                      ||+.||+|.+.+
T Consensus       134 lH~~gi~H~Dl~  145 (206)
T PF06293_consen  134 LHDAGIYHGDLN  145 (206)
T ss_pred             HHHCcCCCCCCC
Confidence            999999998654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.94  E-value=0.014  Score=48.59  Aligned_cols=115  Identities=10%  Similarity=0.128  Sum_probs=75.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---h---------HHHHHHHHHHHhcC--CCCcceeeeeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---K---------KKIKREIKILQNLC--GGPNVVKLLDIV  189 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~---------~~~~~Ei~il~~l~--~h~nIv~l~~~~  189 (252)
                      ..+|+..+.+-......|.+...  +|..+.+|..+...   +         ....+++..+.+++  |...++.++-+.
T Consensus        30 ~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~  107 (229)
T PF06176_consen   30 DNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA  107 (229)
T ss_pred             hCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence            57899999998888888888776  67889999986533   1         12345555555554  122222322222


Q ss_pred             EcCC---CceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          190 RDQH---SKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       190 ~~~~---~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +...   ....+|||||++|..|.+.. .+++    .+..+|.++|.-||+.|++|.++
T Consensus       108 ekk~~~~~~~~~ll~EYIeG~~l~d~~-~i~e----~~~~ki~~~ikqlH~~G~~HGD~  161 (229)
T PF06176_consen  108 EKKIFRYTSSYVLLMEYIEGVELNDIE-DIDE----DLAEKIVEAIKQLHKHGFYHGDP  161 (229)
T ss_pred             eeeeccceeEEEEEEEEecCeecccch-hcCH----HHHHHHHHHHHHHHHcCCccCCC
Confidence            2111   12367999999998887653 2333    35566778899999999999864

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.73  E-value=0.011  Score=53.72  Aligned_cols=99  Identities=13%  Similarity=0.134  Sum_probs=65.7

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeec----------cchHHHHHHHHHHHhcCCC--CcceeeeeEEEcCCCcee
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKP----------VKKKKIKREIKILQNLCGG--PNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~----------~~~~~~~~Ei~il~~l~~h--~nIv~l~~~~~~~~~~~~  197 (252)
                      .+.||.|.++.||++.+...++.+.||.-.+          ...++...|.+.|..+...  .++++++.+..  +.  .
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~--~  106 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--EL--A  106 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CC--C
Confidence            4679999999999999854335899998531          1345678899999887532  46788887733  32  6


Q ss_pred             EEEecCCCCCC-HHhHc--cCCCHHHHHHHHHHHHHHHHHHH
Q 025443          198 SLIFEYVNSTD-FKVLY--PTLTDYDIRYYIYELLKVMSIFI  236 (252)
Q Consensus       198 ~lV~E~~~gg~-L~~~l--~~l~~~~~~~i~~qi~~aL~yLH  236 (252)
                      ++||||+++.. +.+.+  +....    .++.+|...|.-+|
T Consensus       107 ~lVME~L~~~~~lr~~Ll~g~~~p----~~a~~iG~~LA~~~  144 (401)
T PRK09550        107 VTVMEDLSDHKILRKGLIDGKKYP----KLAEHIGEFLARTL  144 (401)
T ss_pred             EEEEecCCCccHHHHHHhcCCccH----HHHHHHHHHHHHHH
Confidence            89999998643 54554  22222    33445555555554

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.49  E-value=0.029  Score=47.49  Aligned_cols=111  Identities=14%  Similarity=0.127  Sum_probs=73.0

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc----------------------h-----HHHHHHHHHHHhcCC-CCcc
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK----------------------K-----KKIKREIKILQNLCG-GPNV  182 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----------------------~-----~~~~~Ei~il~~l~~-h~nI  182 (252)
                      ..|.+|--+.||+|.. .++..+|+|+.+...                      .     ....+|..-|+++.. +-.+
T Consensus        54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv  132 (268)
T COG1718          54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV  132 (268)
T ss_pred             eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            3677777788999977 568899999996421                      0     113567777777651 2334


Q ss_pred             eeeeeEEEcCCCceeEEEecCCCCC-CHHhHc--cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEeeeec
Q 025443          183 VKLLDIVRDQHSKTPSLIFEYVNST-DFKVLY--PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQSFL  248 (252)
Q Consensus       183 v~l~~~~~~~~~~~~~lV~E~~~gg-~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~~~~  248 (252)
                      ++-+++.   .   -.|||||+... .-.-.|  -.+..+++..+..++++.|.-|-. .|.||.+-|--
T Consensus       133 P~Pi~~~---~---nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEy  196 (268)
T COG1718         133 PEPIAFR---N---NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEY  196 (268)
T ss_pred             CCceeec---C---CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhh
Confidence            4444432   1   47999999532 111112  123444788999999999998887 99999976643

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=96.20  E-value=0.049  Score=45.24  Aligned_cols=100  Identities=12%  Similarity=0.176  Sum_probs=66.5

Q ss_pred             EeEeeecCceEEEEEEEcC-CCcEEEEEEeeccch--HHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          130 VRKVGRGKYSEVFEGINVN-TNERCIIKILKPVKK--KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~-~~~~vAvK~i~~~~~--~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      ++.|..|-...+|++.... .+..+++|+......  -...+|+.+++.+....-.+++++.+.  +    .+||||++|
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~----~~l~e~i~G   76 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ--N----GLIYEFIPG   76 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC--C----cEEEEeeCC
Confidence            4578888889999987633 256788997754321  223589999999863444556654432  2    379999998


Q ss_pred             CCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          207 TDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       207 g~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      .++....  +   ....++.++++.|.-||+...
T Consensus        77 ~~l~~~~--~---~~~~~~~~la~~l~~lH~~~~  105 (235)
T cd05157          77 RTLEPED--L---RNPKIYRLIARELAKLHSIKP  105 (235)
T ss_pred             CcCCHHH--c---cChHHHHHHHHHHHHHhcccc
Confidence            6654221  1   113577889999999998765

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=96.12  E-value=0.083  Score=43.29  Aligned_cols=105  Identities=14%  Similarity=0.305  Sum_probs=74.2

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccc-------------------hHHHHHHHHHHHhcC-----CCCcceeee
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVK-------------------KKKIKREIKILQNLC-----GGPNVVKLL  186 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------------------~~~~~~Ei~il~~l~-----~h~nIv~l~  186 (252)
                      ..||+|+.-.||.-   ..+...+||++....                   .++..+|+.-...+.     .+.+|.+++
T Consensus         7 ~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    7 DLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             cccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            57899999888854   345557899997655                   456777777666554     278999999


Q ss_pred             eEEEcCCCceeEEEecCCCC------CCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          187 DIVRDQHSKTPSLIFEYVNS------TDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       187 ~~~~~~~~~~~~lV~E~~~g------g~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |+.+++..  .-+|+|.+..      -+|.+++  +.+++ .+.   ..+-+-.+||-+.+||..+
T Consensus        84 G~veT~~G--~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~-~~~---~~L~~f~~~l~~~~Iv~~d  143 (199)
T PF10707_consen   84 GFVETNLG--LGLVVELIRDADGNISPTLEDYLKEGGLTE-ELR---QALDEFKRYLLDHHIVIRD  143 (199)
T ss_pred             EEEecCCc--eEEEEEEEECCCCCcCccHHHHHHcCCccH-HHH---HHHHHHHHHHHHcCCeecC
Confidence            99999977  8899998642      4577777  44555 333   3334455677888887664

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=95.95  E-value=0.025  Score=47.28  Aligned_cols=101  Identities=12%  Similarity=0.154  Sum_probs=66.7

Q ss_pred             eEeeecCce-EEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCC--CcceeeeeEEEcCCC-ceeEEEecCCC
Q 025443          131 RKVGRGKYS-EVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGG--PNVVKLLDIVRDQHS-KTPSLIFEYVN  205 (252)
Q Consensus       131 ~~lG~G~fg-~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h--~nIv~l~~~~~~~~~-~~~~lV~E~~~  205 (252)
                      +.|+.|+.. .||+..     ..+++|+.+.. ....+.+|+++|..+.++  --+++.++.....+. ...|++||+++
T Consensus         3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~   77 (235)
T cd05155           3 EPVDSGGTDNATFRLG-----DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE   77 (235)
T ss_pred             eeccCCCcccceEEcC-----CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence            467777765 488752     24677876543 245788999999988733  245555554433221 12589999999


Q ss_pred             CCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          206 STDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       206 gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      |.++.+..  +.  +...++.++++.|.-||+..+
T Consensus        78 G~~l~~~~--~~--~~~~l~~~la~~l~~LH~i~~  108 (235)
T cd05155          78 GETATAAA--LS--DPSEFAEDLADFLAALRQIDP  108 (235)
T ss_pred             CCCCCccc--cC--CHHHHHHHHHHHHHHHhCCCc
Confidence            98886542  22  233688999999999998654

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=95.80  E-value=0.0039  Score=46.77  Aligned_cols=46  Identities=17%  Similarity=0.356  Sum_probs=39.7

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLC  177 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~  177 (252)
                      ..||+|+.|.||+|..+ +|+.||||+.++.-.+.+...+.+|+.+-
T Consensus        17 ~PlasASiaQVh~a~l~-~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~   62 (119)
T PF03109_consen   17 EPLASASIAQVHRARLK-DGEEVAVKVQRPGIEEQIEADLRILRRLA   62 (119)
T ss_pred             chhhheehhhheeeeec-ccchhhhhhcchHHHHHHHHHHHHHHHHH
Confidence            57999999999999884 49999999999888888888888887764

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=95.68  E-value=0.09  Score=47.18  Aligned_cols=111  Identities=16%  Similarity=0.214  Sum_probs=77.2

Q ss_pred             EEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------------------------hHHHHHHHHHHHhcCCC
Q 025443          129 VVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------------------------KKKIKREIKILQNLCGG  179 (252)
Q Consensus       129 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------------------------~~~~~~Ei~il~~l~~h  179 (252)
                      +-.+|..|--+.||-+.. .+|..+|||+++...                             .-....|++-|++++ .
T Consensus       148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~-~  225 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLN-N  225 (520)
T ss_pred             cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHH-h
Confidence            345788888899999977 578889999986310                             112568899999988 6


Q ss_pred             CcceeeeeEEEcCCCceeEEEecCCCCCC-HHhHc--cCCCHHHHHHHHHHHHHHHHHHH-HCCCeEEee
Q 025443          180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLY--PTLTDYDIRYYIYELLKVMSIFI-RWSTVLCYQ  245 (252)
Q Consensus       180 ~nIv~l~~~~~~~~~~~~~lV~E~~~gg~-L~~~l--~~l~~~~~~~i~~qi~~aL~yLH-~~~IV~~~~  245 (252)
                      ..|+.---.....    ..|||+|+.+.. -.-.|  -.++...+..+-.|++.-|.-|- ..+.||.+-
T Consensus       226 aGIP~PePIlLk~----hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADL  291 (520)
T KOG2270|consen  226 AGIPCPEPILLKN----HVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADL  291 (520)
T ss_pred             cCCCCCCceeeec----ceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccch
Confidence            6665433333333    579999996322 11222  35888889999999999888775 578888743

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.55  E-value=0.15  Score=44.33  Aligned_cols=96  Identities=14%  Similarity=0.134  Sum_probs=62.3

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcC--CCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLC--GGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~--~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      .+-.+.++.|....+|+..  .+++.+-+|+-.......+..|.+-|+.|.  ..-.+++.+++....+.  -||||||+
T Consensus        19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~--~fLlle~l   94 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDD--AFLLLEFL   94 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSC--CEEEEE--
T ss_pred             eeeeEecCCCChhheEEEE--CCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCC--ceEEEEee
Confidence            4446788989999999887  577889999987555678899999999884  24568899999887765  79999999


Q ss_pred             CCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHH
Q 025443          205 NSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIR  237 (252)
Q Consensus       205 ~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~  237 (252)
                      +.+...           ..-..++.++|+-||+
T Consensus        95 ~~~~~~-----------~~~~~~lg~~LA~LH~  116 (288)
T PF03881_consen   95 EMGSPS-----------PPDWEELGRQLAALHQ  116 (288)
T ss_dssp             -----------------CCHHHHHHHHHHHHHH
T ss_pred             cCCCCC-----------chhHHHHHHHHHHHhh
Confidence            865110           1223556777888998

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=95.26  E-value=0.072  Score=43.22  Aligned_cols=73  Identities=22%  Similarity=0.152  Sum_probs=57.4

Q ss_pred             HHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCCHH-------hHccCCCHHHHHHHHHHHHHHHHHHHH--
Q 025443          167 KREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFK-------VLYPTLTDYDIRYYIYELLKVMSIFIR--  237 (252)
Q Consensus       167 ~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~-------~~l~~l~~~~~~~i~~qi~~aL~yLH~--  237 (252)
                      ..|.-+|+.+++.+++++++|++   +   -++|.||...+++.       ++ -..+|..+..|+.++++.+++|+.  
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~C---G---~~~v~E~~~~~~~~~~~~~l~~~-~~~~w~~R~~iA~~lL~~l~~l~~~~   79 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSC---G---RFYVVEYVGAGSLYGIYRPLSQF-LQSPWEQRAKIALQLLELLEELDHGP   79 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeEC---C---CEEEEEeecCccccccccccccc-cccCHHHHHHHHHHHHHHHHHHhcCC
Confidence            46889999999667999999988   2   36788999877654       33 356899999999999999999998  


Q ss_pred             -CCCeEEeee
Q 025443          238 -WSTVLCYQS  246 (252)
Q Consensus       238 -~~IV~~~~~  246 (252)
                       ..+..|+.+
T Consensus        80 ~~~~~lcDv~   89 (188)
T PF12260_consen   80 LGFFYLCDVS   89 (188)
T ss_pred             CCcEEEeecc
Confidence             446666543

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=95.26  E-value=0.08  Score=45.63  Aligned_cols=97  Identities=9%  Similarity=0.116  Sum_probs=66.4

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCC-CcceeeeeE------EEcCCCceeEEEec
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGG-PNVVKLLDI------VRDQHSKTPSLIFE  202 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h-~nIv~l~~~------~~~~~~~~~~lV~E  202 (252)
                      ++.|..|....+|+...  .+..+++|+........+..|+.++..|..+ -.+++.+..      ...++  ..++|+|
T Consensus        19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~--~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTT--DSGRYVLTLFEKVSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAG--KPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEe--CCCcEEEEEcCCCChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCC--ceEEEEE
Confidence            56788888889999865  3456899988765556778899999988622 124454431      12232  3789999


Q ss_pred             CCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHC
Q 025443          203 YVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRW  238 (252)
Q Consensus       203 ~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~  238 (252)
                      |++|..+..    .+.    ..+.++.+.|.-||..
T Consensus        95 ~i~G~~~~~----~~~----~~~~~lg~~La~lH~~  122 (296)
T cd05153          95 FLAGEHLTR----PTA----AHCRQIGEALARLHLA  122 (296)
T ss_pred             eCCCCCCCC----CCH----HHHHHHHHHHHHHHHH
Confidence            999876643    222    3567888889999975

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=94.85  E-value=0.0064  Score=57.50  Aligned_cols=108  Identities=11%  Similarity=0.087  Sum_probs=79.1

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCc-ceeeeeEEEcCCCceeEEEecCC
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPN-VVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~n-Iv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      .|......++|+++++++.+...+...+ .+.+...  ....-++++|.+++ ||| .+.+++-+.....  .+++|+++
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--l~~rl~~eLLdK~n-~P~~~v~~~~d~~~E~~--~~i~~~i~  316 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--LSRRLAIELLDKVN-NPNPVVRYLEDYDGEDY--LWIPMRIC  316 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--hhhHHHHHHHHHcc-CCCCcccccccCCcccc--cchhhhhh
Confidence            3444566899999999999987665554 7777544  34457889999999 999 5666655555544  99999999


Q ss_pred             CCC-CHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCC
Q 025443          205 NST-DFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWS  239 (252)
Q Consensus       205 ~gg-~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~  239 (252)
                      .+| +-...+    -.+.+.+...+.+.-.++++|||+.-
T Consensus       317 s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~  356 (829)
T KOG0576|consen  317 STGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSY  356 (829)
T ss_pred             cCCccccccCChhhHhhhhhhhhhhhhhhccccccccccc
Confidence            887 333333    24666677788888899999999873

>PLN02756 S-methyl-5-thioribose kinase

Probab=94.73  E-value=0.32  Score=44.33  Aligned_cols=99  Identities=14%  Similarity=0.130  Sum_probs=67.7

Q ss_pred             EEeEeeecCceEEEEEEEcCCCcEEEEEEeec----------cchHHHHHHHHHHHhcCC--CCcceeeeeEEEcCCCce
Q 025443          129 VVRKVGRGKYSEVFEGINVNTNERCIIKILKP----------VKKKKIKREIKILQNLCG--GPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       129 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~----------~~~~~~~~Ei~il~~l~~--h~nIv~l~~~~~~~~~~~  196 (252)
                      ..+.||.|....||+..+  .+..++||.-.+          -...+-..|+..|+.+.+  -.++++++.+..+.    
T Consensus        36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~----  109 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTM----  109 (418)
T ss_pred             eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCC----
Confidence            357899999999999887  345688998641          134455677787777652  24788888887744    


Q ss_pred             eEEEecCCCC--CCHHhHc--cCCCHHHHHHHHHHHHHHHH
Q 025443          197 PSLIFEYVNS--TDFKVLY--PTLTDYDIRYYIYELLKVMS  233 (252)
Q Consensus       197 ~~lV~E~~~g--g~L~~~l--~~l~~~~~~~i~~qi~~aL~  233 (252)
                      -+++||++++  ..+.+-+  +......+..+...+++.|-
T Consensus       110 ~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf  150 (418)
T PLN02756        110 ALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLF  150 (418)
T ss_pred             CEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHh
Confidence            5789999986  3566665  33345666666666666643

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=94.70  E-value=0.0059  Score=56.11  Aligned_cols=69  Identities=19%  Similarity=0.406  Sum_probs=57.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      ..++|+.+..+|.|+||+|+.+.+..++..+|||+|....    ..+..+|..-+..+. |++|+++...|...
T Consensus        47 ~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~fe-h~g~~~~~ha~~~~  119 (516)
T KOG1033|consen   47 EANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFE-HPGIKRYFHAWYER  119 (516)
T ss_pred             hhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhc-ccchhhheeceecC
Confidence            3578899999999999999999998888889999996432    456778888999999 99999988777643

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=94.42  E-value=0.23  Score=42.96  Aligned_cols=100  Identities=16%  Similarity=0.149  Sum_probs=66.6

Q ss_pred             EeEeeecCceEEEEEEEcC------CCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          130 VRKVGRGKYSEVFEGINVN------TNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~------~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      ++.|..|-...||+.....      .++.+++|+.....  .....+|.+++..+...--.+++++++.  +    .+|+
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~--~----~~v~   76 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFP--N----GRIE   76 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeC--C----Cchh
Confidence            3456667777888887533      25789999976532  2456789999999873333445665553  2    2589


Q ss_pred             cCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          202 EYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       202 E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      ||++|..+....  +.   ...++.++++.|.-||+..+
T Consensus        77 e~i~G~~l~~~~--~~---~~~~~~~ia~~L~~lH~~~~  110 (302)
T cd05156          77 EFIPSRTLTTEE--LR---DPDISAEIARRMAKLHSIVV  110 (302)
T ss_pred             heeCCCcCCHhH--cC---CcHHHHHHHHHHHHhhCCCC
Confidence            999987664321  11   12477899999999999765

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR02721 ycfN_thiK thiamine kinase

Probab=94.37  E-value=0.17  Score=42.71  Aligned_cols=96  Identities=16%  Similarity=0.127  Sum_probs=62.2

Q ss_pred             EeeecCceEEEEEEEcCCCcEEEEEEeeccch---HHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCC
Q 025443          132 KVGRGKYSEVFEGINVNTNERCIIKILKPVKK---KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTD  208 (252)
Q Consensus       132 ~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~---~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~  208 (252)
                      .+..|-.+.+|+...  ++..+++|+......   -...+|..+++.+.++.-.++++...  .    -++||||++|..
T Consensus         3 ~~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~----~~~v~e~i~G~~   74 (256)
T TIGR02721         3 TLSGGLTNRSWRIEH--PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--E----HWLLVEWLEGEV   74 (256)
T ss_pred             cCCCcCcCCeEEEEe--CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--C----CEEEEEeccCcc
Confidence            345677788998863  566788887654321   13578999999997332234444432  2    368999999866


Q ss_pred             HHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          209 FKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       209 L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      +....  +.   ....+.++++.|.-||+..+
T Consensus        75 ~~~~~--~~---~~~~~~~la~~l~~lH~~~~  101 (256)
T TIGR02721        75 ITLDQ--FV---ALDLLLELAALLHQLHSQPR  101 (256)
T ss_pred             ccccc--cc---CchhHHHHHHHHHHHhCCCC
Confidence            54321  10   12356888999999998765

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=93.83  E-value=0.052  Score=50.08  Aligned_cols=45  Identities=0%  Similarity=-0.139  Sum_probs=38.6

Q ss_pred             eeEEEecCCCCCCHHhHc------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          196 TPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      ++||.|++|+..+|.+||      ...+......++.|+..|++|   +|.+|-
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihr  380 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHR  380 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhh
Confidence            489999999999999999      246777889999999999998   666554

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=93.82  E-value=0.4  Score=43.00  Aligned_cols=95  Identities=17%  Similarity=0.114  Sum_probs=59.9

Q ss_pred             EeeecCceEEEEEEEcCCCcEEEEEEeec----------cchHHHHHHHHHHHhcCCC-C-cceeeeeEEEcCCCceeEE
Q 025443          132 KVGRGKYSEVFEGINVNTNERCIIKILKP----------VKKKKIKREIKILQNLCGG-P-NVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       132 ~lG~G~fg~V~~~~~~~~~~~vAvK~i~~----------~~~~~~~~Ei~il~~l~~h-~-nIv~l~~~~~~~~~~~~~l  199 (252)
                      .||.|....||++.+...++.|+||.-.+          -..++...|...|+...+. | .++++|.+-.+.    ..+
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~----~~~   77 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEM----AVT   77 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEcccc----cee
Confidence            58999999999999854446799997532          1245667888888876532 2 466666554333    579


Q ss_pred             EecCCC-CCCHHhHc--cCCCHHHHHHHHHHHHH
Q 025443          200 IFEYVN-STDFKVLY--PTLTDYDIRYYIYELLK  230 (252)
Q Consensus       200 V~E~~~-gg~L~~~l--~~l~~~~~~~i~~qi~~  230 (252)
                      |||+++ ...|++.|  +......+..+..-+++
T Consensus        78 vMEdL~~~~ilR~~Li~g~~~p~~A~~iG~~La~  111 (370)
T TIGR01767        78 VMEDLSHHKIARKGLIEGENYPHLARHIGEFLAK  111 (370)
T ss_pred             hHhhCccchHHHHHHHcCCCChHHHHHHHHHHHH
Confidence            999995 34455555  44444444433333333

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=92.95  E-value=0.011  Score=58.72  Aligned_cols=117  Identities=17%  Similarity=0.160  Sum_probs=85.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .+.+.+.+-+-+|+||.++.+.-..+|...++|+....      +.+....+-.++.... +|-+++....+....+  .
T Consensus       803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~-~P~v~~~~~s~~~rsP--~  879 (1205)
T KOG0606|consen  803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPR-SPAVVRSFPSFPCRSP--L  879 (1205)
T ss_pred             CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCC-CCceecccCCCCCCCC--c
Confidence            56677888899999999999988888877777766431      1222333333333334 5666665554444444  8


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      +|+|+|+.|++|...+   +..+++-++.++..+.++++|||+..++|-
T Consensus       880 ~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~  928 (1205)
T KOG0606|consen  880 PLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHR  928 (1205)
T ss_pred             chhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcc
Confidence            9999999999999998   457788889999999999999999876664

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=92.54  E-value=0.61  Score=40.53  Aligned_cols=103  Identities=11%  Similarity=0.104  Sum_probs=64.4

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCC-CcceeeeeEE----EcCCCceeEEE
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGG-PNVVKLLDIV----RDQHSKTPSLI  200 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h-~nIv~l~~~~----~~~~~~~~~lV  200 (252)
                      ...++.++.|....+|+... .++ .+++|+.... ....+..|+.++..|.++ -.+++.+...    .....+..+++
T Consensus        24 ~~~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l  101 (307)
T TIGR00938        24 LLSLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACL  101 (307)
T ss_pred             ceeccccCCccccceEEEEe-CCC-cEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEE
Confidence            44456778887789998865 334 5788987553 245667888888888521 1244444311    00111347899


Q ss_pred             ecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCC
Q 025443          201 FEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWS  239 (252)
Q Consensus       201 ~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~  239 (252)
                      |||++|..+..    .+.    ..+.++.+.|.-||...
T Consensus       102 ~e~i~G~~~~~----~~~----~~~~~~G~~LA~lH~~~  132 (307)
T TIGR00938       102 VEFLQGLSVGR----PTA----MHCRPVGEVLAWMHLAG  132 (307)
T ss_pred             EEeCCCCCCCC----CCH----HHHHHHHHHHHHHHhhh
Confidence            99999866532    122    24678888999999743

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK12396 5-methylribose kinase; Reviewed

Probab=92.30  E-value=0.55  Score=42.67  Aligned_cols=80  Identities=19%  Similarity=0.171  Sum_probs=56.3

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeec---------cchHHHHHHHHHHHhcCCC--CcceeeeeEEEcCCCceeE
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKP---------VKKKKIKREIKILQNLCGG--PNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~---------~~~~~~~~Ei~il~~l~~h--~nIv~l~~~~~~~~~~~~~  198 (252)
                      .+.||.|.-..||++.+...++.|+||.-.+         -..++...|.++|+.+.+.  ..++++|.+-.+.    ..
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e~----~~  109 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSVM----NC  109 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECcHH----hh
Confidence            5789999999999999843356789987532         1256778899999876532  3567777664443    67


Q ss_pred             EEecCCCC-CCHHhHc
Q 025443          199 LIFEYVNS-TDFKVLY  213 (252)
Q Consensus       199 lV~E~~~g-g~L~~~l  213 (252)
                      +|||+++. ..|++.|
T Consensus       110 ~vMEdL~~~~ilR~~L  125 (409)
T PRK12396        110 CVMEDLSDHTILRTAL  125 (409)
T ss_pred             HHHHhCcccHHHHHHH
Confidence            99999953 3455555

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=91.95  E-value=0.58  Score=39.85  Aligned_cols=94  Identities=18%  Similarity=0.204  Sum_probs=63.7

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHH---HHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCC-C
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREI---KILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN-S  206 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei---~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~-g  206 (252)
                      ..+..|..+.|+.++. .+|..+++|+..+...  ...|.   ..|+..+ -...|++++.-.+.    -.|+||.+. |
T Consensus         8 ~~~~~g~~s~V~pv~~-~dG~~avLKl~~p~~~--~~~E~~g~~~L~~w~-G~GaVrll~~d~~~----~AlLLErl~~g   79 (253)
T PF04655_consen    8 GPPAHGSSSLVVPVRR-ADGTPAVLKLAPPHAE--AEHEARGEAALRWWN-GRGAVRLLAADPER----GALLLERLDPG   79 (253)
T ss_pred             CCCCCCcceEEEEEEc-CCCCeEEEEecCCccc--chhhhhHHhHhheeC-CCCceeeecccccc----chhhhhhccCC
Confidence            3456788899999976 6789999999865332  12333   5688888 67788999876444    468999994 4


Q ss_pred             CCHHhHccCCCHHHHHHHHHHHHHHH
Q 025443          207 TDFKVLYPTLTDYDIRYYIYELLKVM  232 (252)
Q Consensus       207 g~L~~~l~~l~~~~~~~i~~qi~~aL  232 (252)
                      .+|.++...-..+++..++.+++..|
T Consensus        80 ~~L~~~~~~g~d~~a~~i~a~l~~~L  105 (253)
T PF04655_consen   80 RSLASLPREGDDDEATRIAAGLLRRL  105 (253)
T ss_pred             CchhhcccccCchHHHHHHHHHHHHH
Confidence            57766542333566666666665443

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=91.80  E-value=0.1  Score=46.20  Aligned_cols=109  Identities=14%  Similarity=0.184  Sum_probs=74.2

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-------------------------hHHHHHHHHHHHhcCCCC
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-------------------------KKKIKREIKILQNLCGGP  180 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------------------------~~~~~~Ei~il~~l~~h~  180 (252)
                      -+.++++||-|--+.||.+-+ ..|...++|+=+...                         .-...+|...|+.|..|-
T Consensus        93 v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g  171 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG  171 (465)
T ss_pred             hhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence            367789999999999999988 467888888754210                         112467888888887332


Q ss_pred             c-ceeeeeEEEcCCCceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          181 N-VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       181 n-Iv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      . +++-++    .  +..|+|||+++|-.|.+.-...+   ...+...++.-+.-|-.+|+|||+
T Consensus       172 fpVPkpiD----~--~RH~Vvmelv~g~Pl~~v~~v~d---~~~ly~~lm~~Iv~la~~GlIHgD  227 (465)
T KOG2268|consen  172 FPVPKPID----H--NRHCVVMELVDGYPLRQVRHVED---PPTLYDDLMGLIVRLANHGLIHGD  227 (465)
T ss_pred             CCCCCccc----c--cceeeHHHhhcccceeeeeecCC---hHHHHHHHHHHHHHHHHcCceecc
Confidence            2 233332    2  23799999999988876643333   334555555666678899999994

>PRK05231 homoserine kinase; Provisional

Probab=91.18  E-value=1.1  Score=39.05  Aligned_cols=98  Identities=9%  Similarity=0.105  Sum_probs=60.5

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCC-Ccceeeee------EEEcCCCceeEEEec
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGG-PNVVKLLD------IVRDQHSKTPSLIFE  202 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h-~nIv~l~~------~~~~~~~~~~~lV~E  202 (252)
                      .+.|+.|....+|+... .+| .+++|+......+.+..|+.++..|..+ -.+++.+.      +....  +..+++||
T Consensus        27 ~~~l~~G~~n~~y~v~t-~~g-~~vLK~~~~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~--g~~~~l~~  102 (319)
T PRK05231         27 LKGIAEGIENSNFFLTT-TQG-EYVLTLFERLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELA--GKPAAIVT  102 (319)
T ss_pred             cchhccccccceEEEEe-CCC-cEEEEEeccCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeC--CEEEEEEE
Confidence            45677788789999876 333 6889988633345566677777777511 12334332      11222  23789999


Q ss_pred             CCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCC
Q 025443          203 YVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWS  239 (252)
Q Consensus       203 ~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~  239 (252)
                      |++|..+.    ..+.    ..+.++.++|.-||...
T Consensus       103 ~l~G~~~~----~~~~----~~~~~~G~~LA~lH~~~  131 (319)
T PRK05231        103 FLEGKWPR----APTA----AHCAEVGEMLARMHLAG  131 (319)
T ss_pred             ecCCCCCC----CCCH----HHHHHHHHHHHHHHhhh
Confidence            99986542    1222    23467888888899753

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.89  E-value=1.1  Score=37.88  Aligned_cols=76  Identities=16%  Similarity=0.222  Sum_probs=50.4

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCC--CCcceeeeeEEEcCCCceeEEEecCCCCCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCG--GPNVVKLLDIVRDQHSKTPSLIFEYVNSTD  208 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~--h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~  208 (252)
                      +.+.-|.--..|...+  ....+-+|+=..+....|..|+.=|+.+..  --.+.+.+.+....++  .||||||++-|.
T Consensus        22 ~~v~gG~inea~~v~d--g~~~~FvK~n~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~--sylVle~L~~~~   97 (286)
T COG3001          22 EEVSGGDINEAWRLRD--GTDPFFVKCNQREQLSMFTAEADGLELLARSNTITVPKVIAVGASRDH--SYLVLEYLPTGP   97 (286)
T ss_pred             cccCCccccceeEeec--CCcceEEEecchhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCe--eEEEEeeccCCC
Confidence            3444444334444433  345678887666667788889887777651  3457788888777766  999999998655


Q ss_pred             HH
Q 025443          209 FK  210 (252)
Q Consensus       209 L~  210 (252)
                      +.
T Consensus        98 ~d   99 (286)
T COG3001          98 LD   99 (286)
T ss_pred             CC
Confidence            43

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=90.38  E-value=1.6  Score=37.91  Aligned_cols=89  Identities=11%  Similarity=0.173  Sum_probs=54.1

Q ss_pred             ceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcC--CCCcceeeee------EEEcCCCceeEEEecCCCCCCH
Q 025443          138 YSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLC--GGPNVVKLLD------IVRDQHSKTPSLIFEYVNSTDF  209 (252)
Q Consensus       138 fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~--~h~nIv~l~~------~~~~~~~~~~~lV~E~~~gg~L  209 (252)
                      -|.||++.. . +..+++|.+. ...+++...+.++..|.  |-+.++.++.      +...+  +..+++|++++|.. 
T Consensus        19 ~~~v~~v~T-~-~G~~~Lk~~~-~~~~~l~~~~~~~~~L~~~G~~~~~~~~~t~~G~~~~~~~--~~~~~L~~wi~G~~-   92 (309)
T TIGR02904        19 TGKLFKVYT-D-QGVFALKKLY-ADRNTIESFVSQIQVLSEKGFSRIVPVYPTKDGSYYLFHG--HFLYYLMPWLDIER-   92 (309)
T ss_pred             cCcEEEEEe-C-CCCEEEEEec-cchHhHHHHHHHHHHHHHcCCCcCCceeecCCCCeeeEEC--CEEEEEeCCccccc-
Confidence            457999866 3 4468999987 33444455556666664  1344555532      11222  23689999999621 


Q ss_pred             HhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          210 KVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       210 ~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                           .+...   .-+.++++.|+-||..+.
T Consensus        93 -----~~~~~---~~~~~~~~~LA~lH~~~~  115 (309)
T TIGR02904        93 -----NEERN---YQHESMFQELALLHRKTV  115 (309)
T ss_pred             -----ccCCH---HHHHHHHHHHHHHHHhhh
Confidence                 11111   457788889999998765

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=88.91  E-value=1.2  Score=45.41  Aligned_cols=76  Identities=12%  Similarity=0.117  Sum_probs=59.6

Q ss_pred             HHHHHHHHHhcCCCCcceeeeeEEEcCCCc--eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          166 IKREIKILQNLCGGPNVVKLLDIVRDQHSK--TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       166 ~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~--~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      ...|+..+.++. |+|++.++.|.......  ...+.-|+|.+-++...+   +..+...++.+..++++||+|+|+...
T Consensus       229 ~E~e~~~l~k~~-~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l  307 (1351)
T KOG1035|consen  229 TEIELESLSKIA-HDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSL  307 (1351)
T ss_pred             HHHHHHHHHhhc-cccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhcc
Confidence            456777788888 99999999988755431  134455688888888777   678999999999999999999999854


Q ss_pred             eE
Q 025443          241 VL  242 (252)
Q Consensus       241 V~  242 (252)
                      .|
T Consensus       308 ~~  309 (1351)
T KOG1035|consen  308 EH  309 (1351)
T ss_pred             ce
Confidence            43

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=87.48  E-value=3.7  Score=36.21  Aligned_cols=108  Identities=16%  Similarity=0.229  Sum_probs=64.9

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec-----cchHHHHHHHHHHHhcCC-CCcceeeeeEEEcCCCceeEEE
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP-----VKKKKIKREIKILQNLCG-GPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----~~~~~~~~Ei~il~~l~~-h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ..+++.+-.|.-..+|...+  +++.+++. ...     .......+|..+|+.+.. -.-+..-++.+.+..-...|.|
T Consensus        27 ~~~v~~~~~G~sn~t~~~~~--~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v  103 (321)
T COG3173          27 LLIVEEISGGWSNDTFRLGD--TGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYV  103 (321)
T ss_pred             CceeeeccCCcccceEEEec--CCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEE
Confidence            34444553443344555444  37778877 321     224556789999999863 2233345555555442247999


Q ss_pred             ecCCCCCCHHhHccCCCHHHHHHHH-HHHHHHHHHHHHCC
Q 025443          201 FEYVNSTDFKVLYPTLTDYDIRYYI-YELLKVMSIFIRWS  239 (252)
Q Consensus       201 ~E~~~gg~L~~~l~~l~~~~~~~i~-~qi~~aL~yLH~~~  239 (252)
                      |+|++|..+...+......  ..++ ..++..|.-||+-.
T Consensus       104 ~~~veGe~~~~~~~~~~~~--~~~~~~~l~~~La~LH~id  141 (321)
T COG3173         104 MEWVEGEVVWSALPPESLG--RQFALDALADFLAELHSID  141 (321)
T ss_pred             EEEecceeccCcCCcccch--HHHHHHHHHHHHHHHhCCC
Confidence            9999987766665222222  3344 48999999999864

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=87.14  E-value=4.6  Score=34.80  Aligned_cols=86  Identities=13%  Similarity=0.150  Sum_probs=53.6

Q ss_pred             EEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCC--cceeeeeE------EEcCCCceeEEEecCCCCCCHHh
Q 025443          140 EVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGP--NVVKLLDI------VRDQHSKTPSLIFEYVNSTDFKV  211 (252)
Q Consensus       140 ~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~--nIv~l~~~------~~~~~~~~~~lV~E~~~gg~L~~  211 (252)
                      .||++.. . +..+++|++... ...+..|+.++..|. ..  .++.++..      ...+  +..++++||++|..+. 
T Consensus        11 ~v~~v~t-~-~g~~~LK~~~~~-~~~~~~~~~~~~~L~-~~g~~vp~~i~t~~g~~~~~~~--~~~~~l~~~i~G~~~~-   83 (313)
T TIGR02906        11 NVYKVET-D-SGNKCLKKINYP-PERLLFILGAQEHLR-KNGFNIPKILKTKDGELYVKYN--GDLYVLTEWIEGRECD-   83 (313)
T ss_pred             cEEEEEe-C-CCCeEEEEcCCC-HHHHHHHHHHHHHHH-HcCCCCCceeecCCCCEEEEEC--CEEEEEehhccCcCCC-
Confidence            4888765 3 335889988532 345666788777775 22  33444422      1223  3489999999986654 


Q ss_pred             HccCCCHHHHHHHHHHHHHHHHHHHHCC
Q 025443          212 LYPTLTDYDIRYYIYELLKVMSIFIRWS  239 (252)
Q Consensus       212 ~l~~l~~~~~~~i~~qi~~aL~yLH~~~  239 (252)
                         ..+..    -+.++.+.|.-||...
T Consensus        84 ---~~~~~----~~~~~g~~La~lH~~~  104 (313)
T TIGR02906        84 ---FNNPI----DLKKAAKGLALFHHAS  104 (313)
T ss_pred             ---CCCHH----HHHHHHHHHHHHHHhC
Confidence               12222    3677888899999864

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PTZ00384 choline kinase; Provisional

Probab=86.50  E-value=3.6  Score=37.24  Aligned_cols=97  Identities=14%  Similarity=0.162  Sum_probs=61.6

Q ss_pred             EeEeeecCceEEEEEEEcCCC-cE-----EEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          130 VRKVGRGKYSEVFEGINVNTN-ER-----CIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~-~~-----vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      ++.|..|-.+.+|++...... ..     |.++......  .-...+|+.+++.+..+..-+++++.+.      -++|.
T Consensus        55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~------~g~l~  128 (383)
T PTZ00384         55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG------DFTIQ  128 (383)
T ss_pred             EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecC------CEEEE
Confidence            456666888999999753321 22     3443321111  1123579999999984455566777663      25899


Q ss_pred             cCCCCCCHHhHccCCCHHHHH--HHHHHHHHHHHHHHHCC
Q 025443          202 EYVNSTDFKVLYPTLTDYDIR--YYIYELLKVMSIFIRWS  239 (252)
Q Consensus       202 E~~~gg~L~~~l~~l~~~~~~--~i~~qi~~aL~yLH~~~  239 (252)
                      ||++|..|       +..+..  .+..+|++.|.-||+..
T Consensus       129 efIeGr~l-------~~~dl~~p~~~~~IA~~La~lH~~~  161 (383)
T PTZ00384        129 EWVEGNTM-------GIDSLQNLSVLTGIASSLAKFHKRV  161 (383)
T ss_pred             EEeccccC-------ChhHhcCHHHHHHHHHHHHHHhccc
Confidence            99997544       333333  57888999999999964

>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]

Probab=84.93  E-value=6.6  Score=33.05  Aligned_cols=99  Identities=15%  Similarity=0.157  Sum_probs=62.2

Q ss_pred             eEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCC-CcceeeeeEEEcCCCceeEEEecCCCCCCHHhHccCCC
Q 025443          139 SEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGG-PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLT  217 (252)
Q Consensus       139 g~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h-~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l~~l~  217 (252)
                      +.||+..- .++--+-+|+-...-...+.+|.+.++=+.+. -.+.++.++..+.+.  -||+|+-++|-++...-..++
T Consensus        33 ~~v~rl~a-~~r~g~~~k~~~~~~~a~L~~Ea~RlrWla~~~l~~P~V~~~~~~~~~--~wLl~salpG~~~s~~~~~~~  109 (266)
T COG3231          33 AGVFRLFA-DSRPGLYLKIASSGPAAELEGEAARLRWLAGQGLGCPRVLGLEDDADQ--AWLLMSALPGEDASHPRYALD  109 (266)
T ss_pred             CeEEEEec-cCCCceEEEEecCcchhhhhhHHHHHHHhcccCCCCCceEeeccCcch--hHHhhhhcCCCcccchhhcCC
Confidence            45666433 23333555665544467788999988877532 234444455444543  899999999877654433345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCeEE
Q 025443          218 DYDIRYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       218 ~~~~~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      .+.   .+.-|+.+|..||...+==|
T Consensus       110 p~r---~v~~la~aLR~LH~l~~~aC  132 (266)
T COG3231         110 PKR---AVPLLAEALRRLHELPVEAC  132 (266)
T ss_pred             HHH---HHHHHHHHHHHHhcCChhhC
Confidence            544   45557899999999877444

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=83.61  E-value=8  Score=34.08  Aligned_cols=102  Identities=14%  Similarity=0.260  Sum_probs=63.9

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCC---CcEEEEEEeeccch--HHHHHHHHHHHhcCCCCcc-eeeeeEEEcCCCceeEE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNT---NERCIIKILKPVKK--KKIKREIKILQNLCGGPNV-VKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~~--~~~~~Ei~il~~l~~h~nI-v~l~~~~~~~~~~~~~l  199 (252)
                      ..++ +.|..|-...+|++.....   +..|.+|+......  -...+|..+++.+. .-++ +++++++  .+.    +
T Consensus        16 ~i~i-~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~-~~gl~P~~l~~~--~~G----~   87 (330)
T PLN02421         16 DFSV-ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLS-AAGFGAKLLGVF--GNG----M   87 (330)
T ss_pred             ceEE-EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHH-hcCCCCceeEEe--CCc----E
Confidence            3443 4565677888998875332   23788898754321  12358999999987 4333 4666665  221    4


Q ss_pred             EecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          200 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       200 V~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      |.||++|..|...  .+..   ..++.+|++.|.-||+..+
T Consensus        88 i~~fi~g~~l~~~--~l~~---~~~~~~ia~~L~~lH~~~~  123 (330)
T PLN02421         88 IQSFINARTLTPS--DMRK---PKVAAEIAKELRRLHQVEI  123 (330)
T ss_pred             eehhhcCCCCChH--HCCC---HHHHHHHHHHHHHHhCCCC
Confidence            8899987554211  1111   1467789999999999775

>PLN02236 choline kinase

Probab=83.26  E-value=11  Score=33.52  Aligned_cols=98  Identities=13%  Similarity=0.134  Sum_probs=63.4

Q ss_pred             EeEeeecCceEEEEEEEcC----CCcEEEEEEeeccch--HHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          130 VRKVGRGKYSEVFEGINVN----TNERCIIKILKPVKK--KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~----~~~~vAvK~i~~~~~--~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      +..|-.|-...+|++....    .++.+.+|+......  -...+|..+++.+....--+++++.+..      ..|.||
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~------g~v~ef  114 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPN------GRVEEF  114 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECC------ceEEEe
Confidence            4566668889999986432    246788998754321  1236899999998733333466665522      157899


Q ss_pred             CCCCCHHhHccCCCHHHHH--HHHHHHHHHHHHHHHCCC
Q 025443          204 VNSTDFKVLYPTLTDYDIR--YYIYELLKVMSIFIRWST  240 (252)
Q Consensus       204 ~~gg~L~~~l~~l~~~~~~--~i~~qi~~aL~yLH~~~I  240 (252)
                      ++|.+|.       ..+..  .+..+++..|.-||+..+
T Consensus       115 i~g~~l~-------~~~l~~~~~~~~ia~~L~~lH~~~~  146 (344)
T PLN02236        115 IHARTLS-------AADLRDPEISALIAAKLREFHSLDM  146 (344)
T ss_pred             eCCCCCC-------HHHcCChHHHHHHHHHHHHHhCCCC
Confidence            9765443       22222  467889999999998764

>TIGR02905 spore_yutH spore coat protein YutH

Probab=81.14  E-value=14  Score=32.21  Aligned_cols=76  Identities=12%  Similarity=0.191  Sum_probs=48.6

Q ss_pred             CCcEEEEEEeeccchHHHHHHHHHHHhcC--CCCcceeeee-----EE-EcCCCceeEEEecCCCCCCHHhHccCCCHHH
Q 025443          149 TNERCIIKILKPVKKKKIKREIKILQNLC--GGPNVVKLLD-----IV-RDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD  220 (252)
Q Consensus       149 ~~~~vAvK~i~~~~~~~~~~Ei~il~~l~--~h~nIv~l~~-----~~-~~~~~~~~~lV~E~~~gg~L~~~l~~l~~~~  220 (252)
                      ++..+++|.+.....+++.-.+.++..|.  |-++|+.++.     .+ ..+  +..+++|++++|....+         
T Consensus        27 ~~g~y~Lk~~e~~~~~~l~f~~~~~~~L~~~G~~~v~~~i~tk~G~~~~~~~--g~~y~L~~w~~~~~~~~---------   95 (313)
T TIGR02905        27 NNQAYLIVPVDGLEEEELAELMAMSDYLQQAGDETVLELVKTKFGQSSALID--GVSYYLFKAPEFNERRG---------   95 (313)
T ss_pred             CCceEEEEEecCCCHHHHHHHHHHHHHHHHcCCCcccceeecCCCCEeEEEC--CEEEEEEeCCCcccchh---------
Confidence            35568999996555666666667677664  1345666553     11 222  34888899876433211         


Q ss_pred             HHHHHHHHHHHHHHHHHCCC
Q 025443          221 IRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       221 ~~~i~~qi~~aL~yLH~~~I  240 (252)
                           .+++++|+-||..+.
T Consensus        96 -----~~~~~~LA~lH~as~  110 (313)
T TIGR02905        96 -----VDLGRELATFHKRGR  110 (313)
T ss_pred             -----HHHHHHHHHHHHhcC
Confidence                 188899999998876

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.

>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat

Probab=80.93  E-value=3.6  Score=37.67  Aligned_cols=70  Identities=19%  Similarity=0.279  Sum_probs=44.7

Q ss_pred             HHHHHHH---HhcCCCCcce--eeeeEEEcCCC--ceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCC
Q 025443          167 KREIKIL---QNLCGGPNVV--KLLDIVRDQHS--KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWS  239 (252)
Q Consensus       167 ~~Ei~il---~~l~~h~nIv--~l~~~~~~~~~--~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~  239 (252)
                      .+|+...   .+++ |+++.  ++|..-...+.  ..-+|+|||+++..-.++...++.+++.    ||++||+.+|..+
T Consensus       114 NrEv~~Y~~~~k~~-~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~~~~~~~e~~~~eql~----~iv~aLA~~~A~s  188 (414)
T PF07914_consen  114 NREVNFYKIFEKFN-HPNLPYPKVYFGKKFDEENKLKGFIIMEYVENVHSMDMYENLSVEQLL----QIVRALAKFHALS  188 (414)
T ss_pred             HHHHHHHHHHHhcC-CCCCCCCceeEEEecCCCCCCCCEEEEeccCCceeecccCCCCHHHHH----HHHHHHHHHHHhH
Confidence            4566554   4455 56655  44433322221  2379999999987655666788888876    4567888888877


Q ss_pred             Ce
Q 025443          240 TV  241 (252)
Q Consensus       240 IV  241 (252)
                      +=
T Consensus       189 l~  190 (414)
T PF07914_consen  189 LK  190 (414)
T ss_pred             cc
Confidence            64

In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=80.44  E-value=13  Score=31.74  Aligned_cols=102  Identities=16%  Similarity=0.044  Sum_probs=58.9

Q ss_pred             eecCceEEEEEEEcC----C----CcEEEEEEeeccc--------hHHHHHHHHHHHhcCC------------CCcceee
Q 025443          134 GRGKYSEVFEGINVN----T----NERCIIKILKPVK--------KKKIKREIKILQNLCG------------GPNVVKL  185 (252)
Q Consensus       134 G~G~fg~V~~~~~~~----~----~~~vAvK~i~~~~--------~~~~~~Ei~il~~l~~------------h~nIv~l  185 (252)
                      |+|-.|.+|++.-.-    +    ...+.||......        ...+.+|+.+.+.+-.            ....+++
T Consensus         2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~   81 (294)
T PF02958_consen    2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKC   81 (294)
T ss_pred             CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceE
Confidence            666677788766422    2    2457888876211        3457788887765420            1234566


Q ss_pred             eeEEEcCCCceeEEEecCCC--CCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 025443          186 LDIVRDQHSKTPSLIFEYVN--STDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTV  241 (252)
Q Consensus       186 ~~~~~~~~~~~~~lV~E~~~--gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV  241 (252)
                      +....+++.  .+||||-+.  |-...+....++.+++..++    +.|+-+|...++
T Consensus        82 ~~~~~~~~~--~~lvlEDL~~~g~~~~~~~~~l~~~~~~~~l----~~LA~fHA~s~~  133 (294)
T PF02958_consen   82 YYADEDPGD--EVLVLEDLSEKGYRMGDRRDGLDLEHAELVL----KKLAKFHAASWA  133 (294)
T ss_pred             EEeccCCCc--eeeehhhhhhcCCcccccccCCCHHHHHHHH----HHHHHHHHHHHH
Confidence            665555443  789999774  22333333567777766555    455566665443

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=80.42  E-value=9.9  Score=32.62  Aligned_cols=101  Identities=11%  Similarity=0.081  Sum_probs=60.4

Q ss_pred             eeecCceEEEEEEEcCCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCC-C-cceeeeeEEEcCCCceeEEEecCCCCCCH
Q 025443          133 VGRGKYSEVFEGINVNTNERCIIKILKPVK-KKKIKREIKILQNLCGG-P-NVVKLLDIVRDQHSKTPSLIFEYVNSTDF  209 (252)
Q Consensus       133 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~Ei~il~~l~~h-~-nIv~l~~~~~~~~~~~~~lV~E~~~gg~L  209 (252)
                      .++|-...|+...+ .+|..+++|+-+... ...+.+|+++|+.+.++ + -++++.  +.+.    -+++|+++.|..+
T Consensus        19 ~~~g~~~~v~~i~~-~~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~~~l~vpvP~~~--~~~~----~~~~y~~i~G~p~   91 (276)
T cd05152          19 NESGLDFQVVFAKD-TDGVPWVLRIPRRPDVSERAAAEKRVLALVRKHLPVQVPDWR--VHTP----ELIAYPKLPGVPA   91 (276)
T ss_pred             cCCcceeEEEEEEc-CCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhcCCCCCCcee--eecC----ceEEEeccCCCcc
Confidence            35555556665533 357788888875422 45688999999999743 1 122322  1122    3567888887655


Q ss_pred             HhHc--------cCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          210 KVLY--------PTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       210 ~~~l--------~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      ...-        ..........++.++.+.|.-||+...
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~  130 (276)
T cd05152          92 ATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQ  130 (276)
T ss_pred             cccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCCh
Confidence            4321        000012334688999999999997643

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	252
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		2e-61
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		1e-60
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		1e-60
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		1e-60
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		3e-60
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		3e-60
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-59
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		2e-59
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-59
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		2e-59
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		5e-45
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		7e-45
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		2e-44
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		2e-44
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		2e-44
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		2e-44
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		2e-44
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		2e-44
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		2e-44
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		2e-44
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		2e-44
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		2e-44
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		2e-44
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		2e-44
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		2e-43
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		1e-42
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		2e-42
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-04

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score =  231 bits (590), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 111/140 (79%), Positives = 117/140 (83%)
Query: 94  MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERC 153
           MSKARVY DVNVLRPKEYWDYE+LTVQWG+QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 1   MSKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKC 60
Query: 154 XXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 213
                              LQNLCGGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLY
Sbjct: 61  IIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY 120
Query: 214 PTLTDYDIRYYIYELLKVMS 233
           PTLTDYDIRYYIYELLK + 
Sbjct: 121 PTLTDYDIRYYIYELLKALD 140

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score =  229 bits (584), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 110/141 (78%), Positives = 116/141 (82%)
Query: 93  AMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNER 152
             SKARVY DVNVLRPKEYWDYE+LTVQWG+QDDYEVVRKVGRGKYSEVFEGINVN NE+
Sbjct: 1   GSSKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEK 60
Query: 153 CXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL 212
           C                   LQNLCGGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVL
Sbjct: 61  CIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL 120
Query: 213 YPTLTDYDIRYYIYELLKVMS 233
           YPTLTDYDIRYYIYELLK + 
Sbjct: 121 YPTLTDYDIRYYIYELLKALD 141

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score =  229 bits (583), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 110/139 (79%), Positives = 116/139 (83%)
Query: 95  SKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCX 154
           SKARVY DVNVLRPKEYWDYE+LTVQWG+QDDYEVVRKVGRGKYSEVFEGINVN NE+C 
Sbjct: 1   SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 155 XXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP 214
                             LQNLCGGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYP
Sbjct: 61  IKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 215 TLTDYDIRYYIYELLKVMS 233
           TLTDYDIRYYIYELLK + 
Sbjct: 121 TLTDYDIRYYIYELLKALD 139

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score =  229 bits (583), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 110/139 (79%), Positives = 116/139 (83%)
Query: 95  SKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCX 154
           SKARVY DVNVLRPKEYWDYE+LTVQWG+QDDYEVVRKVGRGKYSEVFEGINVN NE+C 
Sbjct: 1   SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 155 XXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP 214
                             LQNLCGGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYP
Sbjct: 61  IKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 215 TLTDYDIRYYIYELLKVMS 233
           TLTDYDIRYYIYELLK + 
Sbjct: 121 TLTDYDIRYYIYELLKALD 139

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score =  228 bits (580), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 110/140 (78%), Positives = 116/140 (82%)
Query: 94  MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERC 153
           MSKARVY DVNVLRPKEYWDYE+LTVQWG+QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 21  MSKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKC 80
Query: 154 XXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 213
                              LQNL GGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLY
Sbjct: 81  IIKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY 140
Query: 214 PTLTDYDIRYYIYELLKVMS 233
           PTLTDYDIRYYIYELLK + 
Sbjct: 141 PTLTDYDIRYYIYELLKALD 160

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score =  228 bits (580), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 110/140 (78%), Positives = 116/140 (82%)
Query: 94  MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERC 153
           MSKARVY DVNVLRPKEYWDYE+LTVQWG+QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 1   MSKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKC 60
Query: 154 XXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 213
                              LQNL GGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLY
Sbjct: 61  IIKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY 120
Query: 214 PTLTDYDIRYYIYELLKVMS 233
           PTLTDYDIRYYIYELLK + 
Sbjct: 121 PTLTDYDIRYYIYELLKALD 140

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 109/139 (78%), Positives = 115/139 (82%)
Query: 95  SKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCX 154
           SKARVY DVNVLRPKEYWDYE+LTVQWG+QDDYEVVRKVGRGKYSEVFEGINVN NE+C 
Sbjct: 1   SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 155 XXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP 214
                             LQNL GGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYP
Sbjct: 61  IKILKPVKKKKIKREIKILQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 215 TLTDYDIRYYIYELLKVMS 233
           TLTDYDIRYYIYELLK + 
Sbjct: 121 TLTDYDIRYYIYELLKALD 139

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 109/139 (78%), Positives = 115/139 (82%)
Query: 95  SKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCX 154
           SKARVY DVNVLRPKEYWDYE+LTVQWG+QDDYEVVRKVGRGKYSEVFEGINVN NE+C 
Sbjct: 1   SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 155 XXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP 214
                             LQNL GGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYP
Sbjct: 61  IKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 215 TLTDYDIRYYIYELLKVMS 233
           TLTDYDIRYYIYELLK + 
Sbjct: 121 TLTDYDIRYYIYELLKALD 139

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score =  225 bits (573), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 109/139 (78%), Positives = 115/139 (82%)
Query: 95  SKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCX 154
           SKARVY DVNVLRPKEYWDYE+LTVQWG+QDDYEVVRKVGRGKYSEVFEGINVN NE+C 
Sbjct: 1   SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 155 XXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP 214
                             LQNL GGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYP
Sbjct: 61  IKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 215 TLTDYDIRYYIYELLKVMS 233
           TLTDYDIRYYIYELLK + 
Sbjct: 121 TLTDYDIRYYIYELLKALD 139

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score =  225 bits (573), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 109/139 (78%), Positives = 115/139 (82%)
Query: 95  SKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCX 154
           SKARVY DVNVLRPKEYWDYE+LTVQWG+QDDYEVVRKVGRGKYSEVFEGINVN NE+C 
Sbjct: 1   SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 155 XXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP 214
                             LQNL GGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYP
Sbjct: 61  IKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 215 TLTDYDIRYYIYELLKVMS 233
           TLTDYDIRYYIYELLK + 
Sbjct: 121 TLTDYDIRYYIYELLKALD 139

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score =  177 bits (449), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 104/142 (73%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVAVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 124 LYQTLTDYDIRFYMYEILKALD 145

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score =  177 bits (448), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 83/148 (56%), Positives = 106/148 (71%)
Query: 86  LAEIPLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGI 145
           L  +  P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE I
Sbjct: 3   LGSMSGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI 62
Query: 146 NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN 205
           N+  NE+                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN
Sbjct: 63  NITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN 122
Query: 206 STDFKVLYPTLTDYDIRYYIYELLKVMS 233
           +TDFK LY TLTDYDIR+Y+YE+LK + 
Sbjct: 123 NTDFKQLYQTLTDYDIRFYMYEILKALD 150

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 104/142 (73%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 124 LYQTLTDYDIRFYMYEILKALD 145

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 104/142 (73%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 124 LYQTLTDYDIRFYMYEILKALD 145

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 104/142 (73%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 124 LYQTLTDYDIRFYMYEILKALD 145

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 104/142 (73%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 124 LYQTLTDYDIRFYMYEILKALD 145

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 104/142 (73%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 124 LYQTLTDYDIRFYMYEILKALD 145

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 104/142 (73%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 124 LYQTLTDYDIRFYMYEILKALD 145

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 104/142 (73%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 3   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 62
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 63  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 122
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 123 LYQTLTDYDIRFYMYEILKALD 144

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 104/142 (73%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 124 LYQTLTDYDIRFYMYEILKALD 145

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 104/142 (73%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 124 LYQTLTDYDIRFYMYEILKALD 145

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 81/142 (57%), Positives = 103/142 (72%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDY S  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKNKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 124 LYQTLTDYDIRFYMYEILKALD 145

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 104/142 (73%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 3   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 62
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 63  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 122
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 123 LYQTLTDYDIRFYMYEILKALD 144

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 104/142 (73%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 2   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 61
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 62  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 121
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 122 LYQTLTDYDIRFYMYEILKALD 143

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score =  172 bits (436), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 81/142 (57%), Positives = 103/142 (72%)
Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 4   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 63
Query: 152 RCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           +                    L+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 64  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 123
Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           L  TLTDYDIR+Y+YE+LK + 
Sbjct: 124 LRQTLTDYDIRFYMYEILKALD 145

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score =  169 bits (429), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 81/149 (54%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
Query: 86  LAEIPLPAM-SKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEG 144
           L  +P PA  S+ARVY +VN LR +EYWDYE+    WG+QDDY++VRK+GRGKYSEVFE 
Sbjct: 3   LGSMPGPAAGSRARVYAEVNSLRSREYWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEA 62
Query: 145 INVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
           IN+  NER                    L+NL GG N++KL+D V+D  SKTP+L+FEY+
Sbjct: 63  INITNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIKLIDTVKDPVSKTPALVFEYI 122
Query: 205 NSTDFKVLYPTLTDYDIRYYIYELLKVMS 233
           N+TDFK LY  LTD+DIR+Y+YELLK + 
Sbjct: 123 NNTDFKQLYQILTDFDIRFYMYELLKALD 151

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 80/145 (55%), Positives = 103/145 (71%), Gaps = 1/145 (0%)
Query: 89  IPLPAM-SKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINV 147
           +P PA  S+ARVY +VN LR +EYWDYE+    WG+QDDY++VRK+GRGKYSEVFE IN+
Sbjct: 1   MPGPAAGSRARVYAEVNSLRSREYWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINI 60
Query: 148 NTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST 207
             NER                    L+NL GG N++KL+D V+D  SKTP+L+FEY+N+T
Sbjct: 61  TNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNT 120
Query: 208 DFKVLYPTLTDYDIRYYIYELLKVM 232
           DFK LY  LTD+DIR+Y+YELLK +
Sbjct: 121 DFKQLYQILTDFDIRFYMYELLKAL 145

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 127 YEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 181
           YE+V+K+G+G Y  V++ I+  T E     +                    L  L G  N
Sbjct: 11  YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 182 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTD-YDIRYYIYELLKVM 232
           +V LL+++R  + +   L+F+Y+ +    V+   + +    +Y +Y+L+KV+
Sbjct: 71  IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVI 122

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	252
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-75
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-14
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-14
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-14
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	6e-14
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-13
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-13
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-13
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-13
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-13
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-13
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-13
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-13
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-13
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-13
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-13
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	7e-13
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-13
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-12
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-12
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-12
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-12
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-12
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-12
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-12
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-12
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	4e-12
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-12
3o0g_A	292	Cell division protein kinase 5; kinase activator c	5e-12
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	6e-12
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-12
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-11
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-11
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-11
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-11
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-11
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-11
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-11
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-11
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-11
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-11
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-11
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-11
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-11
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-11
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-11
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-11
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-11
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-11
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-11
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	6e-11
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	6e-11
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	6e-11
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	6e-11
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	7e-11
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	8e-11
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	9e-11
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-10
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-10
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-10
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-10
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-10
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-10
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-10
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-10
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-10
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-10
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-10
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-10
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-10
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	6e-10
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-10
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	7e-10
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-10
2a19_B	284	Interferon-induced, double-stranded RNA-activated	9e-10
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-09
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-09
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-09
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-09
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-09
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-09
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-09
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-09
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-09
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-09
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	4e-09
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	7e-09
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-08
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-08
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-08
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-08
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-08
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-08
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-08
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-08
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-08
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-08
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	9e-08
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	1e-07
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-07
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-07
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-07
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-07
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-07
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	7e-07
3fme_A	290	Dual specificity mitogen-activated protein kinase;	9e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-06
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-06
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-06
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-06
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-06
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	3e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-06
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	7e-06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-06
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	8e-06
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-05
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	5e-05
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	6e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	6e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-05
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	9e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-04
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-04
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-04
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-04
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-04
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	4e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	5e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	7e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-04

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  230 bits (588), Expect = 4e-75
 Identities = 99/139 (71%), Positives = 122/139 (87%)

Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 3   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 62

Query: 152 RCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           + ++KILKPVKKKKIKREIKIL+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 63  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 122

Query: 212 LYPTLTDYDIRYYIYELLK 230
           LY TLTDYDIR+Y+YE+LK
Sbjct: 123 LYQTLTDYDIRFYMYEILK 141

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 124 QDDYEVVRKV-GRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNV 182
            DDY++ ++V G G   +V E  +  T ++C +K+L      K ++E+       GGP++
Sbjct: 27  TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY--DSPKARQEVDHHWQASGGPHI 84

Query: 183 VKLLDIVRDQHSKTPS--LIFEYV 204
           V +LD+  + H       +I E +
Sbjct: 85  VCILDVYENMHHGKRCLLIIMECM 108

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 70.9 bits (174), Expect = 2e-14
 Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 6/112 (5%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVKK----KKIKREIKILQNLCGG 179
             YE+V+K+G+G Y  V++ I+  T E   +K I    +     ++  REI IL  L G 
Sbjct: 9   RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH 68

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLK 230
            N+V LL+++R  + +   L+F+Y+ +    V+    L     +Y +Y+L+K
Sbjct: 69  ENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIK 120

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 70.5 bits (173), Expect = 3e-14
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 12/114 (10%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLL 186
           Y   + +G G +  V++    ++ E   IK +   K+ K  RE++I++ L    N+V+L 
Sbjct: 56  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKL-DHCNIVRLR 113

Query: 187 DIVRDQHSKTPS----LIFEYVNSTDFKVLYP------TLTDYDIRYYIYELLK 230
                   K       L+ +YV  T ++V         TL    ++ Y+Y+L +
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 69.1 bits (170), Expect = 6e-14
 Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 27/122 (22%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK-------------REIK 171
           + YE + K+G G Y  VF+  N +T +   I        KK               REI+
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAI--------KKFLESEDDPVIKKIALREIR 54

Query: 172 ILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL--YPT-LTDYDIRYYIYEL 228
           +L+ L   PN+V LL++ R    +   L+FEY + T    L  Y   + ++ ++   ++ 
Sbjct: 55  MLKQLK-HPNLVNLLEVFR--RKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT 111

Query: 229 LK 230
           L+
Sbjct: 112 LQ 113

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 11/119 (9%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK----IKREIKILQNLCGGP 180
             + +   +G+G  + VF G +  T +   IK+   +   +      RE ++L+ L    
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN-HK 67

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVL-----YPTLTDYDIRYYIYELLKVMS 233
           N+VKL  I  +  ++   LI E+      + VL        L + +    + +++  M+
Sbjct: 68  NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 68.7 bits (168), Expect = 1e-13
 Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 11/119 (9%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGP 180
             + +   +G+G  + VF G +  T +   IK+   +          RE ++L+ L    
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN-HK 67

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVL-----YPTLTDYDIRYYIYELLKVMS 233
           N+VKL  I  +  ++   LI E+      + VL        L + +    + +++  M+
Sbjct: 68  NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 122 GDQDDYEVVRKV-GRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGP 180
              DDY+V  +V G G   +V +  N  T E+  +K+L+     K +RE+++       P
Sbjct: 14  AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKARREVELHWRASQCP 71

Query: 181 NVVKLLDIVRDQHSKTPS--LIFEYV 204
           ++V+++D+  + ++      ++ E +
Sbjct: 72  HIVRIVDVYENLYAGRKCLLIVMECL 97

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 68.6 bits (168), Expect = 1e-13
 Identities = 20/85 (23%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 123 DQDDYEVVRKV-GRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPN 181
             DDY+V  +V G G   +V +  N  T E+  +K+L+     K +RE+++       P+
Sbjct: 59  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKARREVELHWRASQCPH 116

Query: 182 VVKLLDIVRDQHSKTPS--LIFEYV 204
           +V+++D+  + ++      ++ E +
Sbjct: 117 IVRIVDVYENLYAGRKCLLIVMECL 141

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 68.0 bits (167), Expect = 1e-13
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 11/118 (9%)

Query: 121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK-IK----REIKILQN 175
           +   + YE +  VG G Y  V +  N +T     IK        K +K    REIK+L+ 
Sbjct: 21  FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80

Query: 176 LCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL--YPT-LTDYDIRYYIYELLK 230
           L    N+V LL++ +    K   L+FE+V+ T    L  +P  L    ++ Y+++++ 
Sbjct: 81  LR-HENLVNLLEVCK--KKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIIN 135

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 68.7 bits (168), Expect = 1e-13
 Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 13/134 (9%)

Query: 108 PKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVKK--- 163
            K           W   D YE+   +G G Y  V E  +        IK IL+  +    
Sbjct: 36  SKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLID 95

Query: 164 -KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS---LIFEYVNSTDF-KVLY--PTL 216
            K+I REI IL  L    +VVK+LDIV  +  +      ++ E  + +DF K+      L
Sbjct: 96  CKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVYL 153

Query: 217 TDYDIRYYIYELLK 230
           T+  I+  +Y LL 
Sbjct: 154 TELHIKTLLYNLLV 167

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 68.5 bits (168), Expect = 2e-13
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 13/117 (11%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVV 183
           +  Y   + +G G +  VF+   V ++E  I K+L+   K+   RE++I++ +   PNVV
Sbjct: 39  EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD--KRFKNRELQIMRIV-KHPNVV 95

Query: 184 KLLDIVRDQHSKTPS----LIFEYVNSTDFKVL--YP----TLTDYDIRYYIYELLK 230
            L         K       L+ EYV  T ++    Y     T+    I+ Y+Y+LL+
Sbjct: 96  DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 35/132 (26%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK----------------R 168
             YE V ++G G Y  V++  + ++           V  K ++                R
Sbjct: 9   SRYEPVAEIGVGAYGTVYKARDPHSGHF--------VALKSVRVPNGGGGGGGLPISTVR 60

Query: 169 EIKILQNLCGG--PNVVKLLDIVRDQHSKTPS---LIFEYVNSTDFKVL-----YPTLTD 218
           E+ +L+ L     PNVV+L+D+     +       L+FE+V   D +        P L  
Sbjct: 61  EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPA 119

Query: 219 YDIRYYIYELLK 230
             I+  + + L+
Sbjct: 120 ETIKDLMRQFLR 131

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 11/113 (9%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCGG- 179
            Y +++++G G  S+VF+ +N    +   IK               + EI  L  L    
Sbjct: 29  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL--YPTLTDYDIRYYIYELLK 230
             +++L D       +   ++ E  N      L    ++  ++ + Y   +L+
Sbjct: 88  DKIIRLYDYEIT--DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLE 138

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 66.9 bits (164), Expect = 3e-13
 Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 28/124 (22%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK-------------RE 169
             D Y  + K+G G Y EV++ I+  TNE         V  K+I+             RE
Sbjct: 32  SIDRYRRITKLGEGTYGEVYKAIDTVTNET--------VAIKRIRLEHEEEGVPGTAIRE 83

Query: 170 IKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIY 226
           + +L+ L    N+++L  ++   H     LIFEY    D K      P ++   I+ ++Y
Sbjct: 84  VSLLKELQ-HRNIIELKSVIHHNHRLH--LIFEYA-ENDLKKYMDKNPDVSMRVIKSFLY 139

Query: 227 ELLK 230
           +L+ 
Sbjct: 140 QLIN 143

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 66.9 bits (164), Expect = 5e-13
 Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 14/119 (11%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIK--ILKPVKKKKIKREIKILQNLCGGPNV 182
           D ++V R  G+G +  V  G   +T     IK  I  P  + +  + ++ L  L   PN+
Sbjct: 23  DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL-HHPNI 81

Query: 183 VKLLDIVRDQHSKTPS-----LIFEYVNSTDFKVL--YP----TLTDYDIRYYIYELLK 230
           V+L         +        ++ EYV  T  +    Y           I+ ++++L++
Sbjct: 82  VQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 66.4 bits (163), Expect = 7e-13
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 18/119 (15%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK--------REIKILQNL 176
             YE +  +G G+++ V++  + NTN+   IK +K   + + K        REIK+LQ L
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69

Query: 177 CGGPNVVKLLDIVRDQHSKTP-SLIFEYVNSTDFKVL----YPTLTDYDIRYYIYELLK 230
              PN++ LLD       K+  SL+F+++  TD +V+       LT   I+ Y+   L+
Sbjct: 70  S-HPNIIGLLDAF---GHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQ 123

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 66.3 bits (162), Expect = 7e-13
 Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 11/113 (9%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCGG- 179
            Y +++++G G  S+VF+ +N    +   IK               + EI  L  L    
Sbjct: 10  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL--YPTLTDYDIRYYIYELLK 230
             +++L D       +   ++ E  N      L    ++  ++ + Y   +L+
Sbjct: 69  DKIIRLYDYEIT--DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLE 119

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 66.0 bits (161), Expect = 1e-12
 Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 11/113 (9%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCG-G 179
            Y +++++G G  S+VF+ +N    +   IK               + EI  L  L    
Sbjct: 57  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL--YPTLTDYDIRYYIYELLK 230
             +++L D       +   ++ E  N      L    ++  ++ + Y   +L+
Sbjct: 116 DKIIRLYDYEIT--DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLE 166

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 65.3 bits (160), Expect = 1e-12
 Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 28/122 (22%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK------------REIKI 172
           + Y  + K+G G Y+ V++G +  T+          V  K+I+            RE+ +
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNL--------VALKEIRLEHEEGAPCTAIREVSL 53

Query: 173 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL----YPTLTDYDIRYYIYEL 228
           L++L    N+V L DI+  + S T  L+FEY++  D K         +  ++++ ++++L
Sbjct: 54  LKDLK-HANIVTLHDIIHTEKSLT--LVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQL 109

Query: 229 LK 230
           L+
Sbjct: 110 LR 111

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 66.2 bits (161), Expect = 1e-12
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 15/122 (12%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK----PVKKKKIKREIKILQNLCGGP 180
             +E+  ++G G +  V   I+ +T E+  IK  +    P  +++   EI+I++ L   P
Sbjct: 14  GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHP 72

Query: 181 NVVKLLDIVRDQHSKTPS----LIFEYVNSTD-FKVL-----YPTLTDYDIRYYIYELLK 230
           NVV   ++        P+    L  EY    D  K L        L +  IR  + ++  
Sbjct: 73  NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132

Query: 231 VM 232
            +
Sbjct: 133 AL 134

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 64.9 bits (159), Expect = 2e-12
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 33/130 (25%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINV-NTNERCIIKILKPVKKKKIK-------------REI 170
             YE V ++G G Y +VF+  ++ N            V  K+++             RE+
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRF--------VALKRVRVQTGEEGMPLSTIREV 62

Query: 171 KILQNLCGG--PNVVKLLDIVRDQHSKTPS---LIFEYVNSTDFKVL-----YPTLTDYD 220
            +L++L     PNVV+L D+     +   +   L+FE+V   D          P +    
Sbjct: 63  AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTET 121

Query: 221 IRYYIYELLK 230
           I+  +++LL+
Sbjct: 122 IKDMMFQLLR 131

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 64.5 bits (158), Expect = 2e-12
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 30/124 (24%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK-------------REIK 171
           ++++ V K+G G Y  V++  N  T E         V  KKI+             REI 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEV--------VALKKIRLDTETEGVPSTAIREIS 54

Query: 172 ILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-----YPTLTDYDIRYYIY 226
           +L+ L   PN+VKLLD++  ++     L+FE++   D K          +    I+ Y++
Sbjct: 55  LLKELN-HPNIVKLLDVIHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110

Query: 227 ELLK 230
           +LL+
Sbjct: 111 QLLQ 114

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 64.6 bits (158), Expect = 2e-12
 Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 10/136 (7%)

Query: 104 NVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVK 162
           +++R K ++  +     W     Y     VG G Y  V   I+  + E+  IK + +P +
Sbjct: 3   SLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ 62

Query: 163 K----KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS----LIFEYVNSTDFKVLYP 214
                K+  RE+ +L+++    NV+ LLD+     S        L+  ++ +   K++  
Sbjct: 63  SEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL 121

Query: 215 TLTDYDIRYYIYELLK 230
             ++  I+Y +Y++LK
Sbjct: 122 KFSEEKIQYLVYQMLK 137

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 64.6 bits (158), Expect = 3e-12
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 33/129 (25%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK-------------REIK 171
             YE + K+G+G + EVF+  +  T ++        V  KK+              REIK
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQK--------VALKKVLMENEKEGFPITALREIK 68

Query: 172 ILQNLCGGPNVVKLLDIVRDQHSKTPS------LIFEYVNSTDFKVL----YPTLTDYDI 221
           ILQ L    NVV L++I R + S          L+F++    D   L        T  +I
Sbjct: 69  ILQLL-KHENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEI 126

Query: 222 RYYIYELLK 230
           +  +  LL 
Sbjct: 127 KRVMQMLLN 135

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 63.8 bits (156), Expect = 4e-12
 Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 124 QDDYEV---VRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGP 180
              Y++    + +G G +S   + ++  +N+   +KI+    +   ++EI  L+   G P
Sbjct: 7   YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHP 66

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYV 204
           N+VKL ++  DQ      L+ E +
Sbjct: 67  NIVKLHEVFHDQLHT--FLVMELL 88

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 63.8 bits (156), Expect = 4e-12
 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 124 QDDYEVVRKV-GRGKYSEVFEGINVNTNERCIIKIL---KPVKKKKIKREIKILQNLCGG 179
           +D Y++   V G G ++ V   IN+ T++   +KI+       + ++ RE+++L    G 
Sbjct: 11  EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH 70

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYV 204
            NV++L++   ++      L+FE +
Sbjct: 71  RNVLELIEFFEEEDRF--YLVFEKM 93

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 64.3 bits (157), Expect = 4e-12
 Identities = 23/133 (17%), Positives = 55/133 (41%), Gaps = 10/133 (7%)

Query: 107 RPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVKK-- 163
           R   ++  E     +     Y+ ++ +G G    V    +        IK + +P +   
Sbjct: 7   RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 66

Query: 164 --KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS----LIFEYVNSTDFKVLYPTLT 217
             K+  RE+ +++ +    N++ LL++   Q S        ++ E +++   +V+   L 
Sbjct: 67  HAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 125

Query: 218 DYDIRYYIYELLK 230
              + Y +Y++L 
Sbjct: 126 HERMSYLLYQMLC 138

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 63.3 bits (155), Expect = 5e-12
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 29/123 (23%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK-------------REIK 171
             YE + K+G G Y  VF+  N  T+E         V  K+++             REI 
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEI--------VALKRVRLDDDDEGVPSSALREIC 53

Query: 172 ILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL----YPTLTDYDIRYYIYE 227
           +L+ L    N+V+L D++      T  L+FE+    D K         L    ++ ++++
Sbjct: 54  LLKELK-HKNIVRLHDVLHSDKKLT--LVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQ 109

Query: 228 LLK 230
           LLK
Sbjct: 110 LLK 112

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 63.4 bits (155), Expect = 6e-12
 Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 31/126 (24%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK------------REIKI 172
             ++ + K+G G Y+ V++G+N  T           V  K++K            REI +
Sbjct: 5   SQFKQLEKLGNGTYATVYKGLNKTTGVY--------VALKEVKLDSEEGTPSTAIREISL 56

Query: 173 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV--------NSTDFKVLYPTLTDYDIRYY 224
           ++ L    N+V+L D++  ++  T  L+FE++        +S         L    ++Y+
Sbjct: 57  MKELK-HENIVRLYDVIHTENKLT--LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYF 113

Query: 225 IYELLK 230
            ++LL+
Sbjct: 114 QWQLLQ 119

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 63.5 bits (155), Expect = 8e-12
 Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 8/85 (9%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCGG 179
           ++Y++  ++G+G +S V   + V   +     I     L     +K++RE +I + L   
Sbjct: 11  EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KH 69

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYV 204
           PN+V+L D + ++      LIF+ V
Sbjct: 70  PNIVRLHDSISEEGHH--YLIFDLV 92

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 63.2 bits (154), Expect = 1e-11
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCG 178
            + Y+ V+K+G G Y EV    +  T+    IKI     +      K+  E+ +L+ L  
Sbjct: 36  SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-D 94

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYV 204
            PN++KL D   D+ +    L+ E  
Sbjct: 95  HPNIMKLYDFFEDKRNY--YLVMECY 118

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVK 184
           D YEV   +G G YS     I+  TN    +KI+    K+    EI+IL      PN++ 
Sbjct: 22  DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIID-KSKRDPTEEIEILLRYGQHPNIIT 80

Query: 185 LLDIVRDQHSKTPSLIFEYV 204
           L D+  D       ++ E +
Sbjct: 81  LKDVYDDGKYV--YVVTELM 98

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 13/117 (11%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVKK----KKIKREIKILQNLCGG 179
           D+Y +   +GRG Y  V+   + NT +   IK + +  +     K+I REI IL  L   
Sbjct: 26  DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KS 84

Query: 180 PNVVKLLDIVRDQHSKTPS---LIFEYVNSTDF-KVLYP--TLTDYDIRYYIYELLK 230
             +++L D++            ++ E  + +D  K+      LT+  I+  +Y LL 
Sbjct: 85  DYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLL 140

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 5/83 (6%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL--KPVKKKKIKREIKILQNLCGGPN 181
            + Y +   +GRG++  V   +  ++ +  + K +  K   +  +K+EI IL       N
Sbjct: 4   YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRN 62

Query: 182 VVKLLDIVRDQHSKTPSLIFEYV 204
           ++ L +           +IFE++
Sbjct: 63  ILHLHESFESMEELV--MIFEFI 83

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVKKKKIKREIKILQNLCGGPNV 182
            D +EV  ++GRG  S V+      T +   +K + K V KK ++ EI +L  L   PN+
Sbjct: 52  SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLS-HPNI 110

Query: 183 VKLLDIVRDQHSKTPSLIFEYV 204
           +KL +I         SL+ E V
Sbjct: 111 IKLKEIFETPTEI--SLVLELV 130

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCG 178
            + Y +V  +G+G + EV +  +  T +   +K+      K      I RE+++L+ L  
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-D 79

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYV 204
            PN++KL +I+ D  S    ++ E  
Sbjct: 80  HPNIMKLFEILEDSSSF--YIVGELY 103

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 9/120 (7%)

Query: 119 VQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK----KKIKREIKILQ 174
           + +    D+++   +G G Y  V    +  T E   IK ++P  K     +  REIKIL+
Sbjct: 5   IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILK 64

Query: 175 NLCGGPNVVKLLDIVRDQHSKTPS---LIFEYVNSTDFKVLYP-TLTDYDIRYYIYELLK 230
           +     N++ + +I R    +  +   +I E + +   +V+    L+D  I+Y+IY+ L+
Sbjct: 65  HF-KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 8/87 (9%)

Query: 124 QDDYEVVRKV-GRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLC 177
            + Y +  K  GRGK++ V + I+ +T +    K           + +I  EI +L+   
Sbjct: 27  NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK 86

Query: 178 GGPNVVKLLDIVRDQHSKTPSLIFEYV 204
             P V+ L ++  +       LI EY 
Sbjct: 87  SCPRVINLHEVYENTSEII--LILEYA 111

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK----PVKKKKIKREIKILQNLCGG 179
            D +   RK+G G + +V      ++    +IK +      V  ++I+ EI++L++L   
Sbjct: 21  DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DH 79

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYV 204
           PN++K+ ++  D H+    ++ E  
Sbjct: 80  PNIIKIFEVFEDYHNM--YIVMETC 102

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 62.0 bits (151), Expect = 3e-11
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 9/87 (10%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK------PVKKKKIKREIKILQNLC 177
            D Y+  R +G+G + EV    +  T + C +K++          K+ + RE+++L+ L 
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL- 83

Query: 178 GGPNVVKLLDIVRDQHSKTPSLIFEYV 204
             PN++KL +   D+      L+ E  
Sbjct: 84  DHPNIMKLYEFFEDKGYF--YLVGEVY 108

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERC---IIKILKPVKKKKIKREIKILQNLCGGP 180
            D Y+++ ++G G +  V   +   T        I    P+ K  +K EI I+  L   P
Sbjct: 50  YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH-HP 108

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYV 204
            ++ L D   D++     LI E++
Sbjct: 109 KLINLHDAFEDKYEMV--LILEFL 130

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 61.2 bits (149), Expect = 4e-11
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 8/86 (9%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCG 178
            D+Y+V  ++G+G +S V   ++  T      KI     L     +K++RE +I + L  
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ- 86

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYV 204
            PN+V+L D ++++      L+F+ V
Sbjct: 87  HPNIVRLHDSIQEESFH--YLVFDLV 110

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 61.2 bits (149), Expect = 4e-11
 Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 19/122 (15%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKI--LKPVKKKKIKREIKILQNLCGGPN 181
              +E+V  VG G Y +V++G +V T +   IK+  +   ++++IK+EI +L+      N
Sbjct: 23  AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRN 82

Query: 182 VVKLLDIVRDQHSKTPS----LIFEY---------VNSTDFKVLYPTLTDYDIRYYIYEL 228
           +         ++         L+ E+         + +T       TL +  I Y   E+
Sbjct: 83  IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN----TLKEEWIAYICREI 138

Query: 229 LK 230
           L+
Sbjct: 139 LR 140

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 61.0 bits (149), Expect = 4e-11
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 30/126 (23%)

Query: 122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK-------------R 168
           G  + Y+ + KVG G Y  V++  + +            V  K+I+             R
Sbjct: 18  GLMEKYQKLEKVGEGTYGVVYKAKD-SQGRI--------VALKRIRLDAEDEGIPSTAIR 68

Query: 169 EIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL----YPTLTDYDIRYY 224
           EI +L+ L   PN+V L+D++  +   T  L+FE++   D K +       L D  I+ Y
Sbjct: 69  EISLLKELH-HPNIVSLIDVIHSERCLT--LVFEFM-EKDLKKVLDENKTGLQDSQIKIY 124

Query: 225 IYELLK 230
           +Y+LL+
Sbjct: 125 LYQLLR 130

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 61.3 bits (149), Expect = 4e-11
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 9/95 (9%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKIL---KPVKKKKIKREIKILQNLCGGPNVV 183
             V R +  G ++ V+E  +V +     +K L   +  K + I +E+  ++ L G PN+V
Sbjct: 30  LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89

Query: 184 KLLD--IVRDQHSKTPSLIF----EYVNSTDFKVL 212
           +      +  + S T    F    E       + L
Sbjct: 90  QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL 124

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 60.7 bits (148), Expect = 4e-11
 Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 14/93 (15%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK------------PVKKKKIKREIK 171
            ++YE    +GRG  S V   I+  T +   +KI+                ++   +E+ 
Sbjct: 16  YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75

Query: 172 ILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
           IL+ + G PN+++L D           L+F+ +
Sbjct: 76  ILRKVSGHPNIIQLKDTYETNTFF--FLVFDLM 106

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 60.7 bits (148), Expect = 5e-11
 Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL---KPVKKKKIKREIKILQNLCGGP 180
           +  +  +  +G G +SEVF      T +   +K +      +   ++ EI +L+ +    
Sbjct: 8   RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK-HE 66

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYV 204
           N+V L DI          L+ + V
Sbjct: 67  NIVTLEDIYESTTHY--YLVMQLV 88

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 60.3 bits (147), Expect = 5e-11
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 8/86 (9%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCG 178
            D+Y+V  ++G+G +S V   ++  T      KI     L     +K++RE +I + L  
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ- 63

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYV 204
            PN+V+L D ++++      L+F+ V
Sbjct: 64  HPNIVRLHDSIQEESFH--YLVFDLV 87

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 60.4 bits (147), Expect = 5e-11
 Identities = 18/115 (15%), Positives = 40/115 (34%), Gaps = 10/115 (8%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-----PVKKKKIKREIKILQNLCG 178
           Q  ++ + ++G G Y EVF+  +        +K        P  + +   E+   + +  
Sbjct: 56  QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ 115

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLK 230
            P  V+L      +      L  E    +  +       +L +  +  Y+ + L 
Sbjct: 116 HPCCVRLEQ--AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLL 168

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 60.8 bits (148), Expect = 6e-11
 Identities = 26/116 (22%), Positives = 56/116 (48%), Gaps = 11/116 (9%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVKK----KKIKREIKILQNLCGG 179
             Y  ++ VG G Y  V   ++  T  +  IK + +P +     K+  RE+++L+++   
Sbjct: 25  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR-H 83

Query: 180 PNVVKLLDIVRDQHSKTPS----LIFEYVNSTDFKVLYP-TLTDYDIRYYIYELLK 230
            NV+ LLD+     +        L+  ++ +   K++    L +  I++ +Y++LK
Sbjct: 84  ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLK 139

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 60.2 bits (147), Expect = 6e-11
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 30/123 (24%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK-------------REIK 171
           + Y  + K+G G Y  V++  N N  E            KKI+             REI 
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQN-NYGET--------FALKKIRLEKEDEGIPSTTIREIS 52

Query: 172 ILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL----YPTLTDYDIRYYIYE 227
           IL+ L    N+VKL D++  +      L+FE++   D K L       L     + ++ +
Sbjct: 53  ILKELK-HSNIVKLYDVIHTKKRLV--LVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQ 108

Query: 228 LLK 230
           LL 
Sbjct: 109 LLN 111

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 60.4 bits (147), Expect = 6e-11
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 11/132 (8%)

Query: 109 KEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL-----KPVKK 163
             ++  E     W   + Y+ +  VG G Y  V    +  T  R  +K L       +  
Sbjct: 13  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72

Query: 164 KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS----LIFEYVNSTDFKVLYP-TLTD 218
           K+  RE+++L+++    NV+ LLD+     S        L+   + +    ++    LTD
Sbjct: 73  KRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 131

Query: 219 YDIRYYIYELLK 230
             +++ IY++L+
Sbjct: 132 DHVQFLIYQILR 143

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 60.6 bits (147), Expect = 6e-11
 Identities = 22/134 (16%), Positives = 57/134 (42%), Gaps = 10/134 (7%)

Query: 108 PKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVKK--- 163
             +++  E     +     Y+ ++ +G G    V    +   +    IK + +P +    
Sbjct: 45  DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 104

Query: 164 -KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS----LIFEYVNSTDFKVLYPTLTD 218
            K+  RE+ +++ +    N++ LL++   Q +        L+ E +++   +V+   L  
Sbjct: 105 AKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH 163

Query: 219 YDIRYYIYELLKVM 232
             + Y +Y++L  +
Sbjct: 164 ERMSYLLYQMLCGI 177

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 60.5 bits (147), Expect = 7e-11
 Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 13/91 (14%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKK-----------KIKREIKIL 173
             Y+    +GRG  S V   ++  T     +KI++   ++             +RE  IL
Sbjct: 94  QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153

Query: 174 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
           + + G P+++ L+D           L+F+ +
Sbjct: 154 RQVAGHPHIITLIDSYESSSFM--FLVFDLM 182

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 60.0 bits (146), Expect = 8e-11
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 18/95 (18%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL---------KPVKKKKIKREIKILQN 175
             Y+V   +G G +  V+ GI V+ N    IK +         +     ++  E+ +L+ 
Sbjct: 43  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102

Query: 176 LC-GGPNVVKLLDIVRDQHSKTPS---LIFEYVNS 206
           +  G   V++LLD       + P    LI E    
Sbjct: 103 VSSGFSGVIRLLDWF-----ERPDSFVLILERPEP 132

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 60.6 bits (147), Expect = 9e-11
 Identities = 19/140 (13%), Positives = 49/140 (35%), Gaps = 7/140 (5%)

Query: 69  TTVVYEGAIIDKIEERNLAEIPLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGD-QDDY 127
             +  +     +  + +     +          D  V    + +  + + ++     D Y
Sbjct: 100 VLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHY 159

Query: 128 EVVRKVGRGKYSEVFEGINVNTNERC---IIKILKPVKKKKIKREIKILQNLCGGPNVVK 184
           ++  ++G G +  V       T        +       K+ +++EI+ +  L   P +V 
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVN 218

Query: 185 LLDIVRDQHSKTPSLIFEYV 204
           L D   D +     +I+E++
Sbjct: 219 LHDAFEDDNEMV--MIYEFM 236

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 17/120 (14%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKIL---KPVKKKKIKREIKILQNLCGGPNVV 183
           Y  ++ +G G    VF  ++ + ++R  IK +    P   K   REIKI++ L    N+V
Sbjct: 13  YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-DHDNIV 71

Query: 184 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP-------------TLTDYDIRYYIYELLK 230
           K+ +I+    S+    +          ++                L +   R ++Y+LL+
Sbjct: 72  KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLR 131

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 8/86 (9%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-------PVKKKKIKREIKILQNLCGG 179
           Y +   +G G Y +V E ++  T  R  +KILK       P  +  +K+EI++L+ L   
Sbjct: 7   YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-H 65

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVN 205
            NV++L+D++ ++  +   ++ EY  
Sbjct: 66  KNVIQLVDVLYNEEKQKMYMVMEYCV 91

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCG 178
            + Y +V  +G+G + EV +  +  T +   +K+      K      I RE+++L+ L  
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-D 79

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYV 204
            PN++KL +I+ D  S    ++ E  
Sbjct: 80  HPNIMKLFEILEDSSSF--YIVGELY 103

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 9/114 (7%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK----KKIKREIKILQNLCGGP 180
             Y  +  +G G Y  V    +     R  IK + P +     ++  REIKIL       
Sbjct: 27  PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHE 85

Query: 181 NVVKLLDIVRDQHSKTPS---LIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLK 230
           N++ + DI+R    +      ++ + + +  +K+L    L++  I Y++Y++L+
Sbjct: 86  NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL---KPVKKKKIKREIKILQNLCGGP 180
              Y +   +GRG + EV   +   T  R   K +         + K+EI+I+++L   P
Sbjct: 8   NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHP 66

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYV 204
           N+++L +   D       L+ E  
Sbjct: 67  NIIRLYETFEDNTDI--YLVMELC 88

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 12/90 (13%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK---------PVKKKKIKREIKILQ 174
           +D Y++  ++G G+++ V +    +T      K +K          V +++I+RE+ IL+
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70

Query: 175 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
            +    NV+ L D+  ++      LI E V
Sbjct: 71  QV-LHHNVITLHDVYENRTDVV--LILELV 97

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 59.0 bits (143), Expect = 2e-10
 Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 44/146 (30%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLL 186
           Y + + +G G +  V E  ++ + +R  +K +    + K  RE+ I++ L    N++KL+
Sbjct: 9   YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN-RELDIMKVLD-HVNIIKLV 66

Query: 187 DIVRDQHSKTPS------------------------------------LIFEYVNSTDFK 210
           D       + P                                     +I EYV  T  K
Sbjct: 67  DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHK 126

Query: 211 VLYP------TLTDYDIRYYIYELLK 230
           VL        ++    I  YIY+L +
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQLFR 152

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 22/144 (15%)

Query: 107 RPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIK-ILKPVKK-- 163
              E    + +      Q  Y V R +  G Y  V  G++ +      IK +   V    
Sbjct: 4   AKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGR 62

Query: 164 -----------KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS---LIFEYVNSTDF 209
                      K++ REI++L +    PN++ L DI             L+ E + +   
Sbjct: 63  TVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLA 121

Query: 210 KVLY---PTLTDYDIRYYIYELLK 230
           +V++     ++   I+Y++Y +L 
Sbjct: 122 QVIHDQRIVISPQHIQYFMYHILL 145

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 17/115 (14%), Positives = 46/115 (40%), Gaps = 9/115 (7%)

Query: 94  MSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERC 153
           M  +  +   +  R   Y  ++   V   ++  Y  ++K+G G +S V     ++     
Sbjct: 1   MGSSHHHHHHSSGRENLY--FQGHMVIIDNKH-YLFIQKLGEGGFSYVDLVEGLHDGHFY 57

Query: 154 IIKIL---KPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS--LIFEY 203
            +K +   +   +++ +RE  + +     PN+++L+     +        L+  +
Sbjct: 58  ALKRILCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPF 111

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 58.6 bits (142), Expect = 3e-10
 Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 9/121 (7%)

Query: 90  PLPAMSKARVYTDVNVLRPKEYWDYESLTVQWGD-QDDYEVVRK--VGRGKYSEVFEGIN 146
            +P  SK      V++  P   +D+  +T + G     Y V +   +G G++ +V +   
Sbjct: 51  RMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEE 110

Query: 147 VNTNERC---IIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY 203
             T  +    IIK      K+++K EI ++  L    N+++L D    ++     L+ EY
Sbjct: 111 TATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIV--LVMEY 167

Query: 204 V 204
           V
Sbjct: 168 V 168

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 11/89 (12%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK--------PVKKKKIKREIKILQN 175
           +D YE+   +G+G +S V   IN  T ++  +KI+          +  + +KRE  I   
Sbjct: 23  EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82

Query: 176 LCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
           L   P++V+LL+           ++FE++
Sbjct: 83  L-KHPHIVELLETYSSDGML--YMVFEFM 108

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 16/120 (13%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-----PVKKKKIKREIKILQNLCG 178
             ++  + K+G G++  VF+ +         IK  K      V ++   RE+     L  
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 179 GPNVVKLLDIVRDQHSKTPSLIF-EYVNS-------TDFKVLYPTLTDYDIRYYIYELLK 230
             +VV+      +       LI  EY N        ++   +     + +++  + ++ +
Sbjct: 70  HSHVVRYFSAWAEDDH---MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 57.9 bits (140), Expect = 4e-10
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 11/89 (12%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK--------PVKKKKIKREIKILQN 175
           Q  Y +   +G+G Y  V   I   T     IKI+         P   ++IK E+++++ 
Sbjct: 25  QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKK 84

Query: 176 LCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
           L   PN+ +L ++  D+      L+ E  
Sbjct: 85  LH-HPNIARLYEVYEDEQYI--CLVMELC 110

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 57.2 bits (139), Expect = 6e-10
 Identities = 21/115 (18%), Positives = 59/115 (51%), Gaps = 13/115 (11%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL------KPVKKKKIKREIKILQNLCG 178
           +D++V   +G+G ++ V+   +++T     IK++      K    ++++ E+KI   L  
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK- 69

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP---TLTDYDIRYYIYELL 229
            P++++L +   D  S    L+ E  ++ +  + L       ++ + R+++++++
Sbjct: 70  HPSILELYNYFED--SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII 122

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 57.8 bits (140), Expect = 6e-10
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 19/96 (19%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK----------------PVKKKKIKR 168
           + Y  VRK+G G Y EV      N +    IK++K                    ++I  
Sbjct: 36  ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95

Query: 169 EIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
           EI +L++L   PN++KL D+  D+      L+ E+ 
Sbjct: 96  EISLLKSL-DHPNIIKLFDVFEDKKYF--YLVTEFY 128

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 57.4 bits (139), Expect = 7e-10
 Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 12/90 (13%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK---------PVKKKKIKREIKILQ 174
           +D Y++  ++G G+++ V +    +T      K +K          V +++I+RE+ IL+
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70

Query: 175 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
            +   PN++ L D+  ++      LI E V
Sbjct: 71  QV-LHPNIITLHDVYENRTDVV--LILELV 97

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 56.9 bits (138), Expect = 8e-10
 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCGG 179
           +DYEV+  +G G Y    +    +  +  + K      +   +K+ +  E+ +L+ L   
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-H 64

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTD 208
           PN+V+  D + D+ + T  ++ EY    D
Sbjct: 65  PNIVRYYDRIIDRTNTTLYIVMEYCEGGD 93

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 56.9 bits (138), Expect = 9e-10
 Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 2/88 (2%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVV 183
             D++ +  +G G + +VF+  +    +  +IK +K    +K +RE+K L  L    N+V
Sbjct: 10  GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK-YNNEKAEREVKALAKLD-HVNIV 67

Query: 184 KLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
                         +       S    +
Sbjct: 68  HYNGCWDGFDYDPETSSKNSSRSKTKCL 95

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 115 ESLTVQW-GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK----PVKKKKIKRE 169
           +S  + W  ++DDYE+   +G G  + V         E+  IK +          ++ +E
Sbjct: 4   DSSALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKE 63

Query: 170 IKILQNLCGGPNVVK 184
           I+ +   C  PN+V 
Sbjct: 64  IQAMS-QCHHPNIVS 77

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 12/90 (13%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK---------PVKKKKIKREIKILQ 174
            D Y+   ++G G+++ V +    +T  +   K +K          V ++ I+RE+ IL+
Sbjct: 10  DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69

Query: 175 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
            +   PNV+ L ++  ++      LI E V
Sbjct: 70  EI-QHPNVITLHEVYENKTDVI--LILELV 96

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK--PVKKKKIKREIKILQNLCGGPN 181
             D+E +  +G+G + +V +  N   +    IK ++    K   I  E+ +L +L     
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQY 63

Query: 182 VVKLLD 187
           VV+   
Sbjct: 64  VVRYYA 69

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 15/92 (16%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------KKKIKREIKI 172
           +D+Y + + +G G   EV       T ++  IKI+   K              ++ EI+I
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 173 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
           L+ L   P ++K+ +    +      ++ E +
Sbjct: 69  LKKL-NHPCIIKIKNFFDAEDY---YIVLELM 96

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 12/114 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL------KPVKKKKIKREIKILQNLCG 178
             Y   R +G+G +++ FE  + +T E    KI+      KP +++K+  EI I ++L  
Sbjct: 41  RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA- 99

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNS---TDFKVLYPTLTDYDIRYYIYELL 229
             +VV       D  +    ++ E        +       LT+ + RYY+ +++
Sbjct: 100 HQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIV 151

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 17/93 (18%), Positives = 39/93 (41%), Gaps = 15/93 (16%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL-----------KPVKKKKIKREIKI 172
           +D+Y + + +G G   EV       T ++  I+I+           +      ++ EI+I
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193

Query: 173 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN 205
           L+ L   P ++K+ +    +      ++ E + 
Sbjct: 194 LKKL-NHPCIIKIKNFFDAEDY---YIVLELME 222

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 55.6 bits (135), Expect = 2e-09
 Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 12/90 (13%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK---------PVKKKKIKREIKILQ 174
           +D YE+  ++G G+++ V +     T +    K +K          V +++I+RE+ IL+
Sbjct: 4   EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63

Query: 175 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
            +   PN++ L DI  ++      LI E V
Sbjct: 64  EI-RHPNIITLHDIFENKTDVV--LILELV 90

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK----PVKKKKIKREIKILQNLCGGP 180
            D+E ++ +GRG +  VFE  N   +    IK ++     + ++K+ RE+K L  L   P
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE-HP 63

Query: 181 NVVKLLD 187
            +V+  +
Sbjct: 64  GIVRYFN 70

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 14/88 (15%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCGGP 180
           +Y +++ +G+G +++V    ++ T     IKI     L P   +K+ RE++I++ L   P
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN-HP 74

Query: 181 NVVKLLDIVRDQHSKTPS---LIFEYVN 205
           N+VKL +++     +T     LI EY +
Sbjct: 75  NIVKLFEVI-----ETEKTLYLIMEYAS 97

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 13/88 (14%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK----KKIKREIKILQNLCGGP 180
           +D+++V+ +G G Y EV   +N  T E   +KI+   +     + IK+EI I + L    
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HE 65

Query: 181 NVVKLLDIVRDQHSKTPSLIF---EYVN 205
           NVVK          +  ++ +   EY +
Sbjct: 66  NVVKFYGHR-----REGNIQYLFLEYCS 88

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 12/114 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL------KPVKKKKIKREIKILQNLCG 178
             Y   R +G+G +++ FE  + +T E    KI+      KP +++K+  EI I ++L  
Sbjct: 15  RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA- 73

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNS---TDFKVLYPTLTDYDIRYYIYELL 229
             +VV       D  +    ++ E        +       LT+ + RYY+ +++
Sbjct: 74  HQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIV 125

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 55.4 bits (134), Expect = 3e-09
 Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL---------KPVKKKKIKREIKILQN 175
            +Y +   +G+G +  VF G  +    +  IK++                   E+ +L  
Sbjct: 31  AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90

Query: 176 LCGG---PNVVKLLDIVRDQHSKTPS---LIFEYVNS 206
           +  G   P V++LLD       +T     L+ E    
Sbjct: 91  VGAGGGHPGVIRLLDWF-----ETQEGFMLVLERPLP 122

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 13/88 (14%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK----KKIKREIKILQNLCGGP 180
           +D+++V+ +G G Y EV   +N  T E   +KI+   +     + IK+EI I + L    
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HE 65

Query: 181 NVVKLLDIVRDQHSKTPSLIF---EYVN 205
           NVVK          +  ++ +   EY +
Sbjct: 66  NVVKFYGHR-----REGNIQYLFLEYCS 88

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 55.1 bits (133), Expect = 4e-09
 Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 11/86 (12%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL--KPVKKKKIKREIKILQNLCGGPNV 182
           D Y+ V+ +G G +       +  T E   +K +       + ++REI   ++L   PN+
Sbjct: 20  DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLR-HPNI 78

Query: 183 VKLLDIVRDQHSKTPSLIF---EYVN 205
           V+  +++      TP+ +    EY +
Sbjct: 79  VRFKEVI-----LTPTHLAIIMEYAS 99

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 55.2 bits (133), Expect = 4e-09
 Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 30/129 (23%)

Query: 124 QDDYEVVR-KVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK---------REIKIL 173
           +D +E    KVGRG Y  V++    +  +     +      K+I+         REI +L
Sbjct: 19  EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYAL------KQIEGTGISMSACREIALL 72

Query: 174 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL------------YPTLTDYDI 221
           + L   PNV+ L  +      +   L+F+Y    D   +               L    +
Sbjct: 73  RELKH-PNVISLQKVFLSHADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMV 130

Query: 222 RYYIYELLK 230
           +  +Y++L 
Sbjct: 131 KSLLYQILD 139

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 54.1 bits (131), Expect = 7e-09
 Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 16/115 (13%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKK--------KIKREIKILQNL 176
           +D+E+ R +G+GK+  V+      +     +K+L   K +        +++RE++I  +L
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSHL 66

Query: 177 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYPT--LTDYDIRYYIYEL 228
              PN+++L     D  +    LI EY      ++ L       +     YI EL
Sbjct: 67  R-HPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 15/88 (17%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKIL------KPVKKKKIKREIKILQNLCGGP 180
           Y +   +G G + +V    +  T ++  +K +      K     +++REI  L+ L   P
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HP 69

Query: 181 NVVKLLDIVRDQHSKTPSLIF---EYVN 205
           +++KL D++      TP+ I    EY  
Sbjct: 70  HIIKLYDVI-----TTPTDIVMVIEYAG 92

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 53.6 bits (129), Expect = 1e-08
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 15/88 (17%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGP 180
           Y +   +G G + +V  G +  T  +  +KIL   K        KI+REI+ L+     P
Sbjct: 18  YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HP 76

Query: 181 NVVKLLDIVRDQHSKTPSLIF---EYVN 205
           +++KL  ++      TPS IF   EYV+
Sbjct: 77  HIIKLYQVI-----STPSDIFMVMEYVS 99

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 15/88 (17%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGP 180
           Y +   +G G + +V  G +  T  +  +KIL   K        KIKREI+ L+     P
Sbjct: 13  YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HP 71

Query: 181 NVVKLLDIVRDQHSKTPSLIF---EYVN 205
           +++KL  ++      TP+  F   EYV+
Sbjct: 72  HIIKLYQVI-----STPTDFFMVMEYVS 94

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 7/76 (9%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIK------ILKPVKKKKIKREIKILQNLCG 178
            ++ + +K+GRG++SEV+    +       +K      ++    +    +EI +L+ L  
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN- 90

Query: 179 GPNVVKLLDIVRDQHS 194
            PNV+K      + + 
Sbjct: 91  HPNVIKYYASFIEDNE 106

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 5/68 (7%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK----PVKKKKIKREIKILQNLCGG 179
           ++ +  + K+G+G + EVF+GI+  T +   IKI+       + + I++EI +L   C  
Sbjct: 21  EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDS 79

Query: 180 PNVVKLLD 187
           P V K   
Sbjct: 80  PYVTKYYG 87

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 13/68 (19%), Positives = 34/68 (50%), Gaps = 6/68 (8%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKI-----LKPVKKKKIKREIKILQNLCGG 179
           + Y  ++K+G G + +     +     + +IK      +   ++++ +RE+ +L N+   
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK-H 82

Query: 180 PNVVKLLD 187
           PN+V+  +
Sbjct: 83  PNIVQYRE 90

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGP 180
            + +E+V ++G G + +V++  N  T      K+++     + +    EI+IL   C  P
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILAT-CDHP 76

Query: 181 NVVKLLD 187
            +VKLL 
Sbjct: 77  YIVKLLG 83

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 53.0 bits (127), Expect = 2e-08
 Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 11/136 (8%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL----KPVKKKKIKREIKILQNLCGG 179
             D+E ++ +GRG +  VFE  N   +    IK +    + + ++K+ RE+K L  L   
Sbjct: 5   LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EH 63

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWS 239
           P +V+  +   +   +      + +   D    +P  +   +     + ++ M  F   +
Sbjct: 64  PGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVK-IRRMDPFSTKN 122

Query: 240 TVLCYQSF-----LYI 250
           TV   Q       LYI
Sbjct: 123 TVGQLQPSSPKVYLYI 138

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 16/112 (14%), Positives = 40/112 (35%), Gaps = 8/112 (7%)

Query: 126 DYEVVRKVGRGKYSE-VFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVK 184
            +     +G G     V+ G+    N    +K + P       RE+++L+     PNV++
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMF--DNRDVAVKRILPECFSFADREVQLLRESDEHPNVIR 82

Query: 185 LLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKVMS 233
                +D+  +   +  E   +T  + +          +    + +    ++
Sbjct: 83  YFCTEKDRQFQ--YIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLA 132

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 11/109 (10%)

Query: 132 KVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK-----IKREIKILQNLCGGPNVVKLL 186
           ++GRG +  V++G++  T        L+  K  K      K E ++L+ L   PN+V+  
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ-HPNIVRFY 91

Query: 187 DIVRDQHSKTPSLIF--EYVNS---TDFKVLYPTLTDYDIRYYIYELLK 230
           D           ++   E + S     +   +  +    +R +  ++LK
Sbjct: 92  DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILK 140

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 18/114 (15%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-----------PVKKKKIKREIKILQ 174
            Y  +  +G G +  V+  ++   N+  ++K +K             K  K+  EI IL 
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 175 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYY 224
            +    N++K+LDI  +Q      L+ E   S      F   +P L +    Y 
Sbjct: 85  RVE-HANIIKVLDIFENQ--GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYI 135

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK-KKIKREIKILQNLCGGPNV 182
           ++ ++V+ K+G G Y  V++ I+  T +   IK +      ++I +EI I+Q  C  P+V
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQ-CDSPHV 86

Query: 183 VKLLD 187
           VK   
Sbjct: 87  VKYYG 91

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 11/66 (16%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL----KPVKKKKIKREIKILQNLCG 178
           + +D E + ++G G   +V++     T     +K +       + K+I  ++ ++     
Sbjct: 23  EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHD 82

Query: 179 GPNVVK 184
            P +V+
Sbjct: 83  CPYIVQ 88

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK------IKREIKILQNLC 177
           +  +  +R++G G +  V+   +V  +E   IK +    K+       I +E++ LQ   
Sbjct: 53  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK-L 111

Query: 178 GGPNVVKLLD 187
             PN ++   
Sbjct: 112 RHPNTIQYRG 121

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL---KPVKKKKIKREIKILQNLCGGP 180
           +  Y    K+G+G    V+  ++V T +   I+ +   +  KK+ I  EI +++     P
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-NKNP 77

Query: 181 NVVKLLD 187
           N+V  LD
Sbjct: 78  NIVNYLD 84

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 52.0 bits (125), Expect = 4e-08
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 8/111 (7%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNV 182
           +        +VGRG + EV    +  T  +C +K ++   +     E+     L   P +
Sbjct: 56  EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR--LEVFRVEELVACAGLS-SPRI 112

Query: 183 VKLLDIVRDQHSKTPSLIFEYVNS---TDFKVLYPTLTDYDIRYYIYELLK 230
           V L   VR+      ++  E +              L +    YY+ + L+
Sbjct: 113 VPLYGAVREGP--WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALE 161

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 52.0 bits (125), Expect = 4e-08
 Identities = 11/67 (16%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL---KPVKKKKIKREIKILQNLCGGP 180
           +   +   K+G G    V      ++  +  +K++   K  +++ +  E+ I+++     
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRD-YQHF 102

Query: 181 NVVKLLD 187
           NVV++  
Sbjct: 103 NVVEMYK 109

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 51.8 bits (125), Expect = 5e-08
 Identities = 25/116 (21%), Positives = 53/116 (45%), Gaps = 16/116 (13%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKK--------KIKREIKILQNL 176
           DD+++ R +G+GK+  V+            +K+L   K +        +++REI+I  +L
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLF--KSQLEKEGVEHQLRREIEIQSHL 71

Query: 177 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVL--YPTLTDYDIRYYIYELL 229
              PN++++ +   D   K   L+ E+    + +K L  +    +     ++ EL 
Sbjct: 72  R-HPNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA 124

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 51.1 bits (123), Expect = 7e-08
 Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 12/107 (11%)

Query: 133 VGRGKYSEVFEGINVNTNERCIIKILKPVKK---KKIKREIKILQNLCGGPNVVKLLDIV 189
           +G+G Y  V+ G +++   R  IK +        + +  EI + ++L    N+V+ L   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK-HKNIVQYLGSF 88

Query: 190 RDQHSKTPSLIFEYVN----STDFKVLYPTLTDYD--IRYYIYELLK 230
            +       +  E V     S   +  +  L D +  I +Y  ++L+
Sbjct: 89  SENG--FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE 133

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 51.3 bits (123), Expect = 9e-08
 Identities = 16/118 (13%), Positives = 32/118 (27%), Gaps = 14/118 (11%)

Query: 124 QDDYEVVRKVGRGKYSEV-FEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNV 182
           ++     + +G G    V F+G          +K +          EIK+L      PNV
Sbjct: 14  KNLVVSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNV 71

Query: 183 VKLLDIVRDQHSKTPSLIFEYVNST---------DFKVLYPTLTDYDIRYYIYELLKV 231
           ++              +  E  N                     +Y+    + ++   
Sbjct: 72  IRYYCSETTDRFL--YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-PVKKKKIKREIKILQNLCGGPNVVKL 185
           + V +K+G G + E+  G N+ TNE   IK+     +  ++  E +  + L  G  + ++
Sbjct: 11  FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQV 70

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP-VKKKKIKREIKILQNLCGGPNVVKL 185
           Y + RK+G G + +++ G ++   E   IK+     K  ++  E KI + + GG  +  +
Sbjct: 11  YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 70

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP-VKKKKIKREIKILQNLCGGPNVVKL 185
           Y+V R++G G +  +FEG N+  N++  IK         +++ E +  + L G   +  +
Sbjct: 12  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 71

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 50.8 bits (121), Expect = 1e-07
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP-VKKKKIKREIKILQNLCGGPNVVKL 185
           + + RK+G G + E++ G N+ TNE   IK+     K  ++  E KI + L GG  +  +
Sbjct: 9   FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNV 68

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 12/73 (16%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK--KKIKREIKILQNLC------- 177
           Y +VRK+G G +S V+   ++  N    +KI++  K   +  + EIK+LQ +        
Sbjct: 21  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80

Query: 178 ---GGPNVVKLLD 187
              G  +++KLLD
Sbjct: 81  DSMGANHILKLLD 93

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 15/125 (12%), Positives = 41/125 (32%), Gaps = 17/125 (13%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTN-----ERCIIKILKPVKKKKIKREIKILQNLC 177
                 V   +G G +++V+E    + N     ++ ++K+ KP    +     ++++ L 
Sbjct: 63  GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLK 122

Query: 178 GG--PNVVKLLDIVRDQHSKTPSLIFEYVNSTDF--------KVLYPTLTDYDIRYYIYE 227
                  +K       Q+     L+ E  +                  +    +  +   
Sbjct: 123 PSMQHMFMKFYSAHLFQNGS--VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR 180

Query: 228 LLKVM 232
           +L ++
Sbjct: 181 MLYMI 185

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 10/64 (15%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL----KPVKKKKIKREIKILQNLCGGP 180
           +D + + ++GRG Y  V + ++  + +   +K +       ++K++  ++ ++      P
Sbjct: 22  EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP 81

Query: 181 NVVK 184
            +V+
Sbjct: 82  YIVQ 85

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 49.5 bits (118), Expect = 3e-07
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 5/64 (7%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKI----LKPVKKKKIKREIKILQNLCGGP 180
           DD+E + ++G G    VF+  +  +      K+    +KP  + +I RE+++L   C  P
Sbjct: 33  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE-CNSP 91

Query: 181 NVVK 184
            +V 
Sbjct: 92  YIVG 95

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 30/108 (27%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKIL---KPVKKK------------------- 164
           Y +  ++G+G Y  V    N N N    +K+L   K +++                    
Sbjct: 15  YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74

Query: 165 -------KIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN 205
                  ++ +EI IL+     PNVVKL++++ D +     ++FE VN
Sbjct: 75  QPRGPIEQVYQEIAILK-KLDHPNVVKLVEVLDDPNEDHLYMVFELVN 121

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 48.4 bits (115), Expect = 7e-07
 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 8/69 (11%)

Query: 123 DQDDYEVVRKVGRG--KYSEVFEGINVNTNERCIIKILKPVKKKK-----IKREIKILQN 175
           +   YE++  +G+G      V       T E   ++ +            ++ E+ + + 
Sbjct: 23  EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSK- 81

Query: 176 LCGGPNVVK 184
           L   PN+V 
Sbjct: 82  LFNHPNIVP 90

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 48.0 bits (115), Expect = 9e-07
 Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKI----LKPVKKKKIKREIKILQNLCGGP 180
           DD E + ++GRG Y  V +  +V + +   +K     +   ++K++  ++ I       P
Sbjct: 7   DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66

Query: 181 NVVK 184
             V 
Sbjct: 67  FTVT 70

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 17/111 (15%), Positives = 33/111 (29%), Gaps = 12/111 (10%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL------KPVKKKKIKREIKILQNLCGG 179
             ++V  +  G  S VF   +V   E   +K+          + +++         L  G
Sbjct: 63  KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARL-LG 121

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDI--RYYIYEL 228
            +     +    +    PS      +   F  L P   DY +     +   
Sbjct: 122 ESPE---EARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPA 169

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 6/67 (8%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK--KKIKREIKILQNL----CGGP 180
           + V+RK+G G +  V    +++  +   +K+++ +KK  +  K E  IL+ +        
Sbjct: 37  FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNN 96

Query: 181 NVVKLLD 187
           N+VK   
Sbjct: 97  NIVKYHG 103

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 11/77 (14%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILK--PVKKKKIKREIKILQNLCGGPNVVK 184
           + + +K+G G +  ++     N  E+    ++K    +   +  E+K  Q +     + K
Sbjct: 39  WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKK 98

Query: 185 LLDIVRDQHSKTPSLIF 201
            ++  +  +   P    
Sbjct: 99  WIERKQLDYLGIPLFYG 115

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 46.9 bits (111), Expect = 2e-06
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 11/111 (9%)

Query: 126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK------KKIKREIKILQNLCGG 179
                  +G+       E  +  T E   + +    ++      K++K E+  L+ L G 
Sbjct: 74  TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDI--RYYIYEL 228
            N  +    +R      P  + +         +     D  +  R+++Y  
Sbjct: 134 KNQKQAKVHLRFI---FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPR 181

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 7/68 (10%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK--KKIKREIKILQNLC-----GG 179
           YE+   +G+G + +V +  +    E   IKI+K  K    + + E+++L+ +        
Sbjct: 56  YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMK 115

Query: 180 PNVVKLLD 187
             +V L  
Sbjct: 116 YYIVHLKR 123

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 16/68 (23%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK--KKIKREIKILQNLC-----GG 179
           YEV++ +G+G + +V +  +   ++   +K+++  K+  ++   EI+IL++L        
Sbjct: 99  YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158

Query: 180 PNVVKLLD 187
            NV+ +L+
Sbjct: 159 MNVIHMLE 166

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 15/101 (14%), Positives = 38/101 (37%), Gaps = 25/101 (24%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK--------------------PVKKK 164
           +DY ++R + +GK++++        N+   +K  +                      K  
Sbjct: 31  NDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88

Query: 165 KIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN 205
             K E++I+ ++      +    I+ +       +I+EY+ 
Sbjct: 89  DFKNELQIITDIK-NEYCLTCEGIITN--YDEVYIIYEYME 126

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 45.4 bits (108), Expect = 7e-06
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGI----NVNTNERCIIKILKP----VKKKKIKREIKILQ 174
           ++   + +R +G G + +V          NT E+  +K LKP         +K+EI+IL+
Sbjct: 19  EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILR 78

Query: 175 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
           NL    N+VK   I  +       LI E++
Sbjct: 79  NLYH-ENIVKYKGICTEDGGNGIKLIMEFL 107

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 45.0 bits (107), Expect = 7e-06
 Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 15/92 (16%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----------KKKKIKREIKI 172
             ++ E  +++G+G +  V +G  V       IK L             K ++ +RE+ I
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76

Query: 173 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
           + NL   PN+VKL  ++ +     P ++ E+V
Sbjct: 77  MSNLN-HPNIVKLYGLMHNP----PRMVMEFV 103

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 45.0 bits (107), Expect = 8e-06
 Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGG 179
              D      +G+G + +  +  +  T E  ++K L       ++   +E+K+++ L   
Sbjct: 8   RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE-H 66

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVN 205
           PNV+K + ++     K  + I EY+ 
Sbjct: 67  PNVLKFIGVLY--KDKRLNFITEYIK 90

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGI----NVNTNERCIIKILK---PVKKKKIKREIKILQN 175
           ++   + + ++G+G +  V          NT     +K L+   P +++  +REI+IL+ 
Sbjct: 21  EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKA 80

Query: 176 LCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
           L     +VK   +      ++  L+ EY+
Sbjct: 81  L-HSDFIVKYRGVSYGPGRQSLRLVMEYL 108

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 24/119 (20%), Positives = 54/119 (45%), Gaps = 15/119 (12%)

Query: 100 YTDVNVLRPKEYWDYESLTVQWGDQDDYEV-------VRKVGRGKYSEVFEG----INVN 148
           + D ++   +  +   ++   + D+D  +        ++++G+G +  V       +  N
Sbjct: 9   HHDYDIPTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDN 68

Query: 149 TNERCIIKILKPVKKKKIK---REIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
           T E   +K L+   ++ ++   REI+IL++L    N+VK   +      +   LI EY+
Sbjct: 69  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYL 126

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 130 VRKVGRGKYSEVFEGI----NVNTNERCIIKILK----PVKKKKIKREIKILQNLCGGPN 181
           +R +G G + +V        N  T E   +K LK    P  +   K+EI IL+ L    +
Sbjct: 36  IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYH-EH 94

Query: 182 VVKLLDIVRDQHSKTPSLIFEYV 204
           ++K      D  + +  L+ EYV
Sbjct: 95  IIKYKGCCEDAGAASLQLVMEYV 117

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 42.6 bits (99), Expect = 5e-05
 Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 24/131 (18%)

Query: 120 QWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKIL-----------KPVKKKKIKR 168
                +  +   K+G G + EVF+ I    +    IKI+                ++I  
Sbjct: 15  HCLPTEKLQRCEKIGEGVFGEVFQTI--ADHTPVAIKIIAIEGPDLVNGSHQKTFEEILP 72

Query: 169 EIKILQNLCG--------GPNVVKLLDIVRDQHSKTPSLIFE---YVNSTDFKVLYPTLT 217
           EI I + L              + L  +   Q S  P L+     Y ++       P   
Sbjct: 73  EIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFF 132

Query: 218 DYDIRYYIYEL 228
             D  + + E 
Sbjct: 133 KDDQLFIVLEF 143

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEG----INVNTNERCIIKILKPVKKKKIK---REIKILQN 175
           ++   + ++++G+G +  V       +  NT E   +K L+   ++ ++   REI+IL++
Sbjct: 8   EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 67

Query: 176 LCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
           L    N+VK   +      +   LI EY+
Sbjct: 68  LQH-DNIVKYKGVCYSAGRRNLKLIMEYL 95

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 42.2 bits (100), Expect = 6e-05
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 20/96 (20%)

Query: 124 QDDYEV-------VRKVGRGKYSEVFEGINVNTNERCI---IKILKP----VKKKKIKRE 169
              Y +        R +G G + EV+EG+  N     I   +K  K       K+K   E
Sbjct: 4   GPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSE 63

Query: 170 IKILQNLCGGPNVVKLLDIVRDQHSKTPSLI-FEYV 204
             I++NL   P++VKL+ I+     + P+ I  E  
Sbjct: 64  AVIMKNLD-HPHIVKLIGII----EEEPTWIIMELY 94

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 9/88 (10%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP----VKKKKIKREIKILQNLCG 178
           + +D  +  ++GRG + EVF G     N    +K  +       K K  +E +IL+    
Sbjct: 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS- 170

Query: 179 GPNVVKLLDIVRDQHSKTPSLI-FEYVN 205
            PN+V+L+ +   +    P  I  E V 
Sbjct: 171 HPNIVRLIGVCTQKQ---PIYIVMELVQ 195

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 8/83 (9%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-KKKIKREIKILQNLCGGPN 181
           D  + EV   VGRG +  V +       +   IK ++    +K    E++ L  +   PN
Sbjct: 6   DYKEIEVEEVVGRGAFGVVCKAK--WRAKDVAIKQIESESERKAFIVELRQLSRVN-HPN 62

Query: 182 VVKLLDIVRDQHSKTPSLIFEYV 204
           +VKL             L+ EY 
Sbjct: 63  IVKLYGACL----NPVCLVMEYA 81

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 11/97 (11%)

Query: 102 DVNVLRPKEYWDYESLTVQWGD--QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK 159
           D     P +Y       V+ GD     Y V+RK+G G +S V+   ++   +   +K++K
Sbjct: 12  DDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK 71

Query: 160 PVKK--KKIKREIKILQNLC-------GGPNVVKLLD 187
             +   +    EI++L+++            VV+LLD
Sbjct: 72  SAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLD 108

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 127 YEVVRKVGRGKYSEVFEGI-NVNTNERCIIKILKPVKK--KKIKREIKILQNLC-----G 178
           YE+V  +G G + +V E + +     +  +KI++ V K  +  + EI +L+ +       
Sbjct: 21  YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKEN 80

Query: 179 GPNVVKLLD 187
               V + D
Sbjct: 81  KFLCVLMSD 89

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 8/69 (11%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTN-ERCIIKILKPVKK--KKIKREIKILQNLC-----G 178
           YE+V  +G G + +V E I+         +KI+K V +  +  + EI++L++L       
Sbjct: 16  YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75

Query: 179 GPNVVKLLD 187
               V++L+
Sbjct: 76  TFRCVQMLE 84

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 117 LTVQWG-DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREI 170
           +    G D      + K+      E+++G     +   ++K+LK       K +    E 
Sbjct: 1   MNKHSGIDFKQLNFLTKLNENHSGELWKGRWQGND--IVVKVLKVRDWSTRKSRDFNEEC 58

Query: 171 KILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY 203
             L+     PNV+ +L   +   +  P+LI  +
Sbjct: 59  PRLRIFS-HPNVLPVLGACQSPPAPHPTLITHW 90

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 20/96 (20%)

Query: 124 QDDYEV-------VRKVGRGKYSEVFEGINVNTNERCI---IKILKP----VKKKKIKRE 169
             DYE+        R +G G++ +V +GI ++     +   IK  K       ++K  +E
Sbjct: 7   TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE 66

Query: 170 IKILQNLCGGPNVVKLLDIVRDQHSKTPSLI-FEYV 204
              ++     P++VKL+ ++    ++ P  I  E  
Sbjct: 67  ALTMRQFD-HPHIVKLIGVI----TENPVWIIMELC 97

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 13/94 (13%), Positives = 37/94 (39%), Gaps = 9/94 (9%)

Query: 127 YEVVRKVGRGKYSEVFEGI-----NVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPN 181
           ++V   +G+G +  ++        +V ++  C++K+ +P     +  E+K  Q       
Sbjct: 37  WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKV-EPSDNGPLFTELKFYQRAAKPEQ 95

Query: 182 VVKLLDIVRDQHSKTPSLIF---EYVNSTDFKVL 212
           + K +   + ++   P          N   ++ +
Sbjct: 96  IQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFM 129

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 18/73 (24%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP--VKKKKIKREIKILQNLCGGP 180
           ++ D  +  K+G G+Y EV+EG+    +    +K LK   ++ ++  +E  +++ +   P
Sbjct: 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HP 276

Query: 181 NVVKLLDIVRDQH 193
           N+V+LL +   + 
Sbjct: 277 NLVQLLGVCTREP 289

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 28/171 (16%), Positives = 59/171 (34%), Gaps = 10/171 (5%)

Query: 40  APIAHHPILRTPCRSSTYNLNIITDTIAATTVVYEGAIIDKIEERNLAEIPLPAMSKARV 99
            P+ HH       R+S     ++         +     +     +      L       V
Sbjct: 5   DPMGHHHHHHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTV 64

Query: 100 YTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCI---IK 156
           + D++ L P+     + + +             +GRG +  V+ G  ++ + + I   +K
Sbjct: 65  HIDLSALNPELVQAVQHVVIG-PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVK 123

Query: 157 ILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY 203
            L  +    +  +   E  I+++    PNV+ LL I        P ++  Y
Sbjct: 124 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGS-PLVVLPY 172

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 17/98 (17%)

Query: 123 DQDDYEV-------VRKVGRGKYSEVFEGI-----NVNTNERCIIKILKP----VKKKKI 166
           D   +E         + +GRG + +V E          T     +K+LK      + + +
Sbjct: 18  DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 77

Query: 167 KREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
             E+KIL ++    NVV LL     +      +I E+ 
Sbjct: 78  MSELKILIHIGHHLNVVNLLGAC-TKPGGPLMVIVEFC 114

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 20/105 (19%)

Query: 108 PKEYW--DYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGI--NVNTNERCIIKILKP--- 160
           P  Y   D+  +  Q            +G G + +V +             IK +K    
Sbjct: 16  PTIYPVLDWNDIKFQ----------DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS 65

Query: 161 -VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV 204
               +    E+++L  L   PN++ LL     +      L  EY 
Sbjct: 66  KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY--LYLAIEYA 108

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 39.1 bits (91), Expect = 8e-04
 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 9/85 (10%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP--VKKKKIKREIKILQNLCGGP 180
            ++   +  K+G+G + EV+ G   N   R  IK LKP  +  +   +E ++++ L    
Sbjct: 265 PRESLRLEVKLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HE 322

Query: 181 NVVKLLDIVRDQHSKTPSLI-FEYV 204
            +V+L  +V    S+ P  I  EY+
Sbjct: 323 KLVQLYAVV----SEEPIYIVTEYM 343

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	252
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.97
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.96
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.96
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.95
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.95
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.95
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.95
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.95
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.95
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.95
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.94
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.94
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.94
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.93
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.93
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.92
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.91
3uqc_A	286	Probable conserved transmembrane protein; structur	99.91
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.91
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.91
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.9
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.9
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.9
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.9
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.9
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.9
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.9
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.9
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.9
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.9
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.9
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.9
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.9
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.9
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.9
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.9
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.9
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.9
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.9
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.9
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.89
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.89
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.89
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.89
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.89
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.89
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.89
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.89
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.89
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.89
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.89
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.89
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.89
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.89
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.89
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.89
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.89
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.89
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.89
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.89
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.89
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.89
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.89
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.89
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.89
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.89
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.89
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.89
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.89
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.89
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.89
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.89
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.89
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.89
3bhy_A	283	Death-associated protein kinase 3; death associate	99.89
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.88
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.88
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.88
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.88
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.88
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.88
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.88
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.88
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.88
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.88
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.88
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.88
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.88
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.88
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.88
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.88
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.88
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.88
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.88
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.88
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.88
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.88
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.88
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.88
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.88
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.88
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.88
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.88
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.88
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.88
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.88
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.88
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.88
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.88
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.87
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.87
3niz_A	311	Rhodanese family protein; structural genomics, str	99.87
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.87
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.87
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.87
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.87
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.87
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.87
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.87
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.87
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.87
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.87
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.87
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.87
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.87
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.87
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.87
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.87
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.87
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.87
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.87
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.87
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.87
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.87
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.87
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.87
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.87
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.86
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.86
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.86
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.86
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.86
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.86
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.86
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.86
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.86
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.86
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.86
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.86
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.86
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.86
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.86
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.86
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.86
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.86
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.86
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.86
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.86
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.86
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.86
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.86
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.86
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.86
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.86
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.86
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.86
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.86
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.86
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.86
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.86
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.86
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.86
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.86
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.86
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.86
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.85
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.85
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.85
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.85
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.85
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.85
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.85
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.85
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.85
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.85
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.85
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.85
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.85
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.85
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.85
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.85
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.85
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.85
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.85
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.85
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.85
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.85
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.85
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.85
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.84
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.84
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.84
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.84
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.84
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.84
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.84
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.84
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.84
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.84
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.84
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.84
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.84
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.84
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.84
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.84
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.84
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.84
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.84
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.83
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.83
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.83
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.83
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.83
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.83
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.83
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.83
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.83
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.83
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.83
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.82
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.82
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.82
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.82
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.81
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.81
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.81
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.81
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.81
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.8
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.8
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.8
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.8
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.8
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.79
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.79
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.73
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.72
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.72
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.65
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.64
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.51
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.97
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.5
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.5
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.24
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.16
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.91
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.89
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.8
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.69
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.5
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.48
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.27
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.97
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.02
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	95.11
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	94.58
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	94.54
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	94.51
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	94.46
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	93.97
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	93.37
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	93.08
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	90.73
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	89.62
3mes_A	424	Choline kinase; malaria, structural genomics, stru	88.77
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	87.85
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	84.38

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.97  E-value=3.9e-30  Score=226.63  Aligned_cols=122  Identities=14%  Similarity=0.277  Sum_probs=105.3

Q ss_pred             cCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       121 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      +...++|++++.||+|+||+||+|+++.+|+.||||+++...     .+.+.+|+++|++|+ |||||+++++|.+++. 
T Consensus        20 f~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~-   97 (350)
T 4b9d_A           20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK-HPNIVQYRESFEENGS-   97 (350)
T ss_dssp             CSCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTE-
T ss_pred             CCcccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCC-CCCCCcEEEEEEECCE-
Confidence            344789999999999999999999999999999999997532     467899999999999 9999999999999865 


Q ss_pred             eeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       +|||||||+||||.++|     ..++|.+++.|+.||+.||+|||++||||.+.
T Consensus        98 -~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDl  151 (350)
T 4b9d_A           98 -LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDI  151 (350)
T ss_dssp             -EEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTC
T ss_pred             -EEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence             99999999999999999     24799999999999999999999999999754

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.96  E-value=6.7e-30  Score=221.74  Aligned_cols=119  Identities=19%  Similarity=0.287  Sum_probs=110.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||++++.      ..+.+.+|+++|+.|+ |||||+++++|.+++.  +
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~--~  107 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEK--L  107 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSE--E
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCE--E
Confidence            35799999999999999999999999999999999742      3567899999999999 9999999999999865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||||.+++   +.++|.+++.|+.||+.||+|||++||||-+.
T Consensus       108 yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDl  158 (311)
T 4aw0_A          108 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL  158 (311)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Confidence            9999999999999999   68999999999999999999999999999753

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.96  E-value=1.6e-29  Score=222.46  Aligned_cols=119  Identities=12%  Similarity=0.167  Sum_probs=110.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .+.|+++++||+|+||+||+|+++.+|+.||||+++..   ..+.+.+|+++|+.++ |||||+++++|.+++.  +|||
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~--~~iv  149 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDE--LWVV  149 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCC-CTTBCCEEEEEEETTE--EEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCE--EEEE
Confidence            46799999999999999999999999999999999643   3567889999999999 9999999999999866  9999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+||+|.+++  +.+++.+++.|+.||+.||+|||++||||.+.
T Consensus       150 mEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDl  196 (346)
T 4fih_A          150 MEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI  196 (346)
T ss_dssp             ECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccC
Confidence            9999999999999  78999999999999999999999999999764

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.96  E-value=4e-29  Score=225.10  Aligned_cols=119  Identities=12%  Similarity=0.167  Sum_probs=110.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .+.|+++++||+|+||.||+|+++.+|+.||||+++..   ..+.+.+|+.+|+.|+ |||||+++++|.+++.  +|||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~--~~iV  226 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDE--LWVV  226 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCC-CTTBCCEEEEEEETTE--EEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCC-CCCCCceEEEEEECCE--EEEE
Confidence            46799999999999999999999999999999999743   3567899999999999 9999999999999865  9999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+||+|.+++  +.+++.+++.|+.||+.||+|||++||||.+.
T Consensus       227 mEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDi  273 (423)
T 4fie_A          227 MEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI  273 (423)
T ss_dssp             EECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccC
Confidence            9999999999999  78999999999999999999999999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.96  E-value=1.3e-28  Score=210.47  Aligned_cols=118  Identities=19%  Similarity=0.420  Sum_probs=104.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||++++.      ..+.+.+|+++|++++ |||||++++++.+++.  +
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~--~   88 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDE--I   88 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE--E
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCE--E
Confidence            46899999999999999999999999999999999643      2457899999999999 9999999999999865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||| +|+|.+++   +.+++.+++.|+.||+.||+|||++||||.+.
T Consensus        89 ~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDi  138 (275)
T 3hyh_A           89 IMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL  138 (275)
T ss_dssp             EEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             EEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccC
Confidence            9999999 58999998   67999999999999999999999999999864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.95  E-value=1.3e-28  Score=215.89  Aligned_cols=117  Identities=19%  Similarity=0.229  Sum_probs=107.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      .+.|++.++||+|+||+||+|+++.+|+.||||+++.+..  ..+|+.+|+.|+ |||||+++++|.+++.  +||||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--~~~E~~il~~l~-HpnIV~l~~~~~~~~~--~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--RVEELVACAGLS-SPRIVPLYGAVREGPW--VNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CTHHHHTTTTCC-CTTBCCEEEEEEETTE--EEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--HHHHHHHHHhCC-CCCCCcEEEEEEECCE--EEEEEec
Confidence            4679999999999999999999999999999999976432  247999999999 9999999999999865  9999999


Q ss_pred             CCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+||+|.++|   +.+++.+++.|+.||+.||+|||++||||.+.
T Consensus       132 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDl  176 (336)
T 4g3f_A          132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV  176 (336)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCC
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccc
Confidence            9999999999   67999999999999999999999999999754

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.95  E-value=6.9e-28  Score=207.53  Aligned_cols=123  Identities=20%  Similarity=0.333  Sum_probs=108.1

Q ss_pred             CCCCCe-EEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcC--C
Q 025443          122 GDQDDY-EVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQ--H  193 (252)
Q Consensus       122 ~~~~~y-~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~--~  193 (252)
                      ....+| ++.++||+|+||+||+|.+..++..||+|++....     .+.+.+|+++|++|+ |||||+++++|.+.  +
T Consensus        22 ~~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~  100 (290)
T 3fpq_A           22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKG  100 (290)
T ss_dssp             CTTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEEETT
T ss_pred             CCCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEeeccCC
Confidence            334565 77888999999999999999999999999996432     457899999999999 99999999999752  2


Q ss_pred             CceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCC--CeEEee
Q 025443          194 SKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWS--TVLCYQ  245 (252)
Q Consensus       194 ~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~--IV~~~~  245 (252)
                      .+.+|||||||+||+|.+++   +.+++..++.|+.||+.||+|||++|  |||.+.
T Consensus       101 ~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDl  157 (290)
T 3fpq_A          101 KKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDL  157 (290)
T ss_dssp             EEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCC
T ss_pred             CcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEeccc
Confidence            24589999999999999999   67999999999999999999999999  999764

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.95  E-value=6e-28  Score=216.59  Aligned_cols=123  Identities=24%  Similarity=0.410  Sum_probs=108.3

Q ss_pred             cCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCC--
Q 025443          121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQH--  193 (252)
Q Consensus       121 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~--  193 (252)
                      +...++|++++.||+|+||+||+|+++.+|+.||||+++...     .+.+.+|+++|+.|+ |||||++++++....  
T Consensus        50 ~~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~  128 (398)
T 4b99_A           50 FDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK-HDNIIAIKDILRPTVPY  128 (398)
T ss_dssp             CCCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSSCT
T ss_pred             CCCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcC-CCCcceEeeeeeccccc
Confidence            344578999999999999999999999999999999996432     456889999999999 999999999987431  


Q ss_pred             --CceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          194 --SKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       194 --~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        .+.+|||||||+ |+|.+++   +.+++.+++.|++||+.||+|||++||||.+.
T Consensus       129 ~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDl  184 (398)
T 4b99_A          129 GEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDL  184 (398)
T ss_dssp             TTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             ccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCc
Confidence              244999999996 6899998   67999999999999999999999999999854

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.95  E-value=6.7e-28  Score=208.58  Aligned_cols=119  Identities=20%  Similarity=0.298  Sum_probs=104.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|.+.+.||+|+||+||+|++.     .++..||||+++...   .++|.+|+++|++|+ |||||++++++.+++. 
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~~~-   89 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEGDP-   89 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS-
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCC-CCCCccEEEEEeeCCE-
Confidence            568999999999999999999875     357889999997543   467899999999999 9999999999998876 


Q ss_pred             eeEEEecCCCCCCHHhHcc----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLYP----------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l~----------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       +|||||||+||||.++|.                .+++.++..|+.||+.||+|||+++|||.+.
T Consensus        90 -~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDl  154 (299)
T 4asz_A           90 -LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDL  154 (299)
T ss_dssp             -EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             -EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCcc
Confidence             999999999999999981                4899999999999999999999999999764

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.95  E-value=1.6e-28  Score=212.62  Aligned_cols=119  Identities=20%  Similarity=0.369  Sum_probs=102.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc---CCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV---NTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++++.||+|+||+||+|++.   .+++.||||++++.     ...++.+|+++|++++ |||||+++++|.+++. 
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~-  100 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFIVKLHYAFQTEGK-  100 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCC-CTTEECEEEEEEETTE-
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCE-
Confidence            467999999999999999999984   46789999999753     2346889999999999 9999999999999865 


Q ss_pred             eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       +|||||||+||||.+++   +.+++.+++.|+.||+.||+|||++||||.+.
T Consensus       101 -~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDl  152 (304)
T 3ubd_A          101 -LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDL  152 (304)
T ss_dssp             -EEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred             -EEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCC
Confidence             99999999999999999   67999999999999999999999999999754

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.95  E-value=1.6e-27  Score=208.87  Aligned_cols=119  Identities=17%  Similarity=0.242  Sum_probs=106.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|.+.++||+|+||+||+|++.     .++..||||+++...   .++|.+|+++|++|+ |||||++++++.+.+. 
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~~~-  117 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRP-  117 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS-
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCE-
Confidence            467999999999999999999874     368899999997543   467999999999999 9999999999998876 


Q ss_pred             eeEEEecCCCCCCHHhHc------------------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY------------------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l------------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       +|||||||+||+|.+++                  ..+++.++..|+.||+.||+|||+++|||.+.
T Consensus       118 -~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDL  184 (329)
T 4aoj_A          118 -LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDL  184 (329)
T ss_dssp             -EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             -EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccc
Confidence             99999999999999997                  13899999999999999999999999999764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.95  E-value=1.7e-27  Score=206.02  Aligned_cols=120  Identities=17%  Similarity=0.239  Sum_probs=102.8

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC------
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS------  194 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~------  194 (252)
                      ++|++++.||+|+||+||+|+++.+|+.||||+++...    .+.+.+|+++|++|+ |||||+++++|.+.+.      
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~~~~   83 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE-HPGIVRYFNAWLEKNTTEKLQP   83 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEEC-------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEecCccccccc
Confidence            46999999999999999999999999999999996432    456889999999999 9999999999976542      


Q ss_pred             ----ceeEEEecCCCCCCHHhHc------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 ----KTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ----~~~~lV~E~~~gg~L~~~l------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                          ..+|||||||+||+|.+++      ....+..++.|+.||++||+|||++||||.+.
T Consensus        84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDl  144 (299)
T 4g31_A           84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDL  144 (299)
T ss_dssp             ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccC
Confidence                2379999999999999999      23456778899999999999999999999754

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.95  E-value=2.8e-27  Score=205.50  Aligned_cols=119  Identities=21%  Similarity=0.324  Sum_probs=105.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++++++++||+|+||+||+|...     .+++.||||+++..    ..+.|.+|+.+|++|+ |||||+++|++.+++.
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~~~~  103 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ-HPNVVCLLGVVTKDQP  103 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCC-CCCCCCcceEEEECCE
Confidence            467899999999999999999863     46789999999643    2578999999999999 9999999999998876


Q ss_pred             ceeEEEecCCCCCCHHhHc-------------------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY-------------------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l-------------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        +|||||||+||||.++|                   ..+++.++..|+.||+.||+|||+++|||.+.
T Consensus       104 --~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDL  171 (308)
T 4gt4_A          104 --LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDL  171 (308)
T ss_dssp             --CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             --EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCc
Confidence              99999999999999998                   13899999999999999999999999999764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.94  E-value=1.3e-26  Score=201.39  Aligned_cols=154  Identities=64%  Similarity=1.060  Sum_probs=141.2

Q ss_pred             CCccCccccccccCCCCccccCCCcccccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHH
Q 025443           93 AMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKI  172 (252)
Q Consensus        93 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~i  172 (252)
                      .++.++.+.+.+...+.++|+++...+.++..++|++++.||+|+||.||+|.+..+++.||||+++....+.+.+|+.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~   83 (330)
T 3nsz_A            4 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKI   83 (330)
T ss_dssp             CCCCCSSSTTTTTTSCHHHHCGGGCCCCCEEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHH
T ss_pred             CCCceeEeccccccCchhHHHhhhhhhcccCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHH
Confidence            44567777778888888999999998898889999999999999999999999999999999999998888899999999


Q ss_pred             HHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          173 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       173 l~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ++.+++|+||+++++++.+......+|||||+++++|.++++.+++.+++.++.||+.||+|||++||||++..
T Consensus        84 l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dik  157 (330)
T 3nsz_A           84 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVK  157 (330)
T ss_dssp             HHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             HHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence            99998799999999999985445599999999999999999889999999999999999999999999998654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.94  E-value=1.9e-26  Score=204.51  Aligned_cols=120  Identities=20%  Similarity=0.346  Sum_probs=109.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc---CCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV---NTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++.+.||+|+||+||+|+++   .+++.||+|.+... ...++.+|+++|+.+.+|+|||+++++|.+.+.  +||
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~--~~l   97 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH--VVI   97 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE--EEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE--EEE
Confidence            478999999999999999999985   45789999998654 356788999999999669999999999999866  999


Q ss_pred             EecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||+||+|.++++.+++.+++.|+.||+.||+|||++||||.+.
T Consensus        98 vmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDi  143 (361)
T 4f9c_A           98 AMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDV  143 (361)
T ss_dssp             EEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             EEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcC
Confidence            9999999999999999999999999999999999999999999754

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.94  E-value=8.4e-27  Score=202.23  Aligned_cols=115  Identities=11%  Similarity=0.226  Sum_probs=101.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .+++++.++||+|+||+||+|++.   ..||||+++..     ..+.|.+|+.+|++++ |||||++++++.++ .  +|
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~~-~--~~  107 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTR-HVNILLFMGYMTKD-N--LA  107 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSS-S--CE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEECC-e--EE
Confidence            467889999999999999999863   35999999742     2467899999999999 99999999988653 3  89


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||+||+|.++|    ..+++.++..|+.||+.||+|||++||||.+.
T Consensus       108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDl  158 (307)
T 3omv_A          108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM  158 (307)
T ss_dssp             EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCC
T ss_pred             EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCcc
Confidence            999999999999998    46999999999999999999999999999764

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.94  E-value=2.3e-26  Score=215.27  Aligned_cols=119  Identities=18%  Similarity=0.300  Sum_probs=110.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++++.||+|+||.||+|+++.+|+.||+|++....   .+.+.+|+.+|+.|+ |||||+|+++|.+++.  +|||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~--~~iv  232 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNE--MVMI  232 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTC-CTTBCCEEEEEECSSE--EEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCE--EEEE
Confidence            478999999999999999999999999999999997543   456889999999999 9999999999999865  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+||+|.++|    +.+++.+++.|++||+.||+|||++||||.+.
T Consensus       233 ~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDl  281 (573)
T 3uto_A          233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDL  281 (573)
T ss_dssp             EECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence            9999999999998    46899999999999999999999999999854

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.93  E-value=1.7e-25  Score=210.87  Aligned_cols=119  Identities=19%  Similarity=0.301  Sum_probs=105.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHH---HHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKRE---IKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~E---i~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||++++..      ...+.+|   +.+++.++ |||||+++++|.+.+.
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~-HP~IV~l~~~f~~~~~  266 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDK  266 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSC-CTTBCCEEEEEECSSE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCC-CCCEeEEEEEEEECCE
Confidence            688999999999999999999999999999999997432      2334444   56667778 9999999999999866


Q ss_pred             ceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        +|||||||+||||.++|   +.+++..++.|+.||+.||+|||++||||-+.
T Consensus       267 --lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDL  318 (689)
T 3v5w_A          267 --LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDL  318 (689)
T ss_dssp             --EEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             --EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence              99999999999999999   68999999999999999999999999998753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.93  E-value=1.7e-25  Score=197.67  Aligned_cols=121  Identities=21%  Similarity=0.284  Sum_probs=104.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC-----CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT-----NERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||+||+|.+..+     ++.||||.++...    .+.+.+|+++|.+++.|||||++++++.+.+ 
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~-  141 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-  141 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT-
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC-
Confidence            57899999999999999999998654     3679999997532    4568999999999983599999999987643 


Q ss_pred             ceeEEEecCCCCCCHHhHcc-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP-------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~-------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +.+|||||||+||+|.++|.                   .+++.++..|+.||++||+|||+++|||.+.
T Consensus       142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDL  211 (353)
T 4ase_A          142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL  211 (353)
T ss_dssp             SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCcc
Confidence            23899999999999999981                   2789999999999999999999999999754

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.92  E-value=4.3e-25  Score=191.30  Aligned_cols=118  Identities=14%  Similarity=0.135  Sum_probs=102.1

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHH--HHHHHHhcCCCCcceeeeeEEEcCCC--ceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKR--EIKILQNLCGGPNVVKLLDIVRDQHS--KTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~--Ei~il~~l~~h~nIv~l~~~~~~~~~--~~~~lV  200 (252)
                      .+|.+.++||+|+||+||+|++  +|+.||||+++....+.+.+  |+..+.+++ |||||++++++.+++.  ..+|||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~-HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCC-CCCCCcEEEEEEecCCCceEEEEE
Confidence            4689999999999999999988  68999999998766555544  555556788 9999999999987642  248999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHC--------CCeEEee
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRW--------STVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~--------~IV~~~~  245 (252)
                      ||||+||+|.++|  ..++++++..++.|++.||+|||++        ||||.+.
T Consensus        80 ~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDl  134 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL  134 (303)
T ss_dssp             EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCC
T ss_pred             ecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccC
Confidence            9999999999999  6799999999999999999999987        8999764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.91  E-value=7.9e-24  Score=185.08  Aligned_cols=120  Identities=20%  Similarity=0.373  Sum_probs=110.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+..+|+.||||++....     .+++.+|+++|+.++ |+||+++++++.+.+.  +|
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~--~~   90 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN-HPNIVKLFEVIETEKT--LY   90 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE--EE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCE--EE
Confidence            578999999999999999999999999999999996532     456889999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||+||+|.+++   +.+++.+++.++.||+.||+|||++||||.+..
T Consensus        91 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlk  141 (328)
T 3fe3_A           91 LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLK  141 (328)
T ss_dssp             EEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCC
Confidence            999999999999998   689999999999999999999999999998653

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.91  E-value=5.3e-24  Score=182.66  Aligned_cols=120  Identities=11%  Similarity=0.174  Sum_probs=108.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++...      .+.+.+|+.++..++ |+||+++++++.+.+.  .
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~--~  106 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID-KPGVARVLDVVHTRAG--G  106 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTE--E
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCC-CCCcceeeEEEEECCc--E
Confidence            478999999999999999999999999999999997542      267899999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||++|++|.+++ ....+.++..|+.||+.||+|||++||||++..
T Consensus       107 ~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dik  156 (286)
T 3uqc_A          107 LVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDH  156 (286)
T ss_dssp             EEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             EEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCC
Confidence            9999999999999999 446777889999999999999999999998653

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.91  E-value=8.1e-24  Score=187.47  Aligned_cols=120  Identities=20%  Similarity=0.346  Sum_probs=110.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||.||+|.+..+|+.||+|+++...         .+.+.+|+.+|+.++ ||||+++++++.+...
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCC-CcCCCcEEEEEEeCCE
Confidence            578999999999999999999999999999999997532         467899999999999 9999999999998865


Q ss_pred             ceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        +|||||||+||+|.+++   +.+++.++..++.||+.||+|||++||||++..
T Consensus        90 --~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlk  142 (361)
T 2yab_A           90 --VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK  142 (361)
T ss_dssp             --EEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             --EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence              99999999999999999   569999999999999999999999999998653

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=2.4e-23  Score=181.25  Aligned_cols=120  Identities=18%  Similarity=0.298  Sum_probs=110.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....  ...+.+|+.+|+.++ ||||+++++++.+.+.  +||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~--~~lv~   80 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR-HRNILHLHESFESMEE--LVMIF   80 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTE--EEEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCC-CCCCCeEeEEEecCCE--EEEEE
Confidence            578999999999999999999999999999999997543  456889999999999 9999999999998865  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||+||+|.+++    ..+++.++..++.||+.||.|||++||||.+..
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlk  129 (321)
T 1tki_A           81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIR  129 (321)
T ss_dssp             CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence            999999999999    258999999999999999999999999998653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.90  E-value=2e-23  Score=184.41  Aligned_cols=120  Identities=18%  Similarity=0.298  Sum_probs=109.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||+||+|++..+++.||||++++.      ..+.+.+|+.++..+.+|+||+++++++.+.+.  +
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~--~   99 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR--L   99 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--E
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE--E
Confidence            67899999999999999999999999999999999753      345678999999998559999999999999865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++   +.+++..++.|+.||+.||+|||++||||.+.
T Consensus       100 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDl  150 (353)
T 3txo_A          100 FFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDL  150 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence            9999999999999998   67999999999999999999999999999864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.90  E-value=1.6e-23  Score=179.70  Aligned_cols=122  Identities=26%  Similarity=0.409  Sum_probs=107.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------------------------hHHHHHHHHHHH
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------------------------KKKIKREIKILQ  174 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------------------------~~~~~~Ei~il~  174 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||||++....                             .+.+.+|+++|+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            578999999999999999999999999999999996432                             245889999999


Q ss_pred             hcCCCCcceeeeeEEEcCCCceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          175 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       175 ~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .++ |+||+++++++.+.....+||||||+++|+|.+++  +.+++.++..++.||+.||+|||++||||++..
T Consensus        92 ~l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  164 (298)
T 2zv2_A           92 KLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIK  164 (298)
T ss_dssp             TCC-CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             hCC-CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            999 99999999999985445699999999999999887  679999999999999999999999999998653

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.90  E-value=2.1e-23  Score=183.13  Aligned_cols=120  Identities=18%  Similarity=0.290  Sum_probs=110.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||+||+|++..+|+.||||++++.      ....+.+|+.+|+.++ ||||+++++++.+.+.  +
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~--~   80 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDR--L   80 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSE--E
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCC-CCcCcceEEEEEeCCE--E
Confidence            57899999999999999999999999999999999643      3567889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||++..
T Consensus        81 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  132 (337)
T 1o6l_A           81 CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK  132 (337)
T ss_dssp             EEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCC
Confidence            9999999999999998   579999999999999999999999999998653

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.90  E-value=1.6e-23  Score=182.47  Aligned_cols=121  Identities=23%  Similarity=0.291  Sum_probs=109.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ..++|++++.||+|+||.||+|.+..+++.||||++....    .+.+.+|+.+++.++ |+||+++++++.+.+.  .|
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~--~~   81 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVVKFYGHRREGNI--QY   81 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCC-CTTBCCEEEEEECSSE--EE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCe--EE
Confidence            3689999999999999999999999999999999996432    356889999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||+||+|.+++   ..+++.+++.++.||+.||+|||++||||++..
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlk  132 (323)
T 3tki_A           82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK  132 (323)
T ss_dssp             EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence            999999999999999   469999999999999999999999999998653

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.90  E-value=3e-23  Score=178.14  Aligned_cols=121  Identities=19%  Similarity=0.252  Sum_probs=110.4

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..++|++++.||+|+||.||+|.+..++..||+|++...      ..+.+.+|+.+++.++ |+||+++++++.+.+.  
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~--   85 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS-HQNIVSMIDVDEEDDC--   85 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC-BTTBCCEEEEEECSSE--
T ss_pred             hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCC-CCCCceEEEeeeeCCe--
Confidence            357899999999999999999999999999999998532      1467889999999999 9999999999998865  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||||++||+|.+++   +.+++..+..++.||+.||+|||++||+|.+..
T Consensus        86 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlk  138 (294)
T 4eqm_A           86 YYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIK  138 (294)
T ss_dssp             EEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            99999999999999999   579999999999999999999999999998653

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.90  E-value=1.3e-23  Score=188.53  Aligned_cols=121  Identities=17%  Similarity=0.284  Sum_probs=104.7

Q ss_pred             CCCeEEE-eEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEc--CCCceeEEE
Q 025443          124 QDDYEVV-RKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRD--QHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~--~~~~~~~lV  200 (252)
                      .++|.+. +.||+|+||+||+|.+..+++.||||+++.  ...+.+|+.++.++.+|+||+++++++..  .+.+.+|||
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~--~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv  137 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV  137 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc--chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEE
Confidence            5678887 689999999999999999999999999964  35677999998666559999999999875  222459999


Q ss_pred             ecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||+||+|.+++     ..+++.+++.|+.||+.||+|||++||||.+..
T Consensus       138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  188 (400)
T 1nxk_A          138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK  188 (400)
T ss_dssp             EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcC
Confidence            9999999999999     248999999999999999999999999998653

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.90  E-value=2.1e-23  Score=184.60  Aligned_cols=120  Identities=18%  Similarity=0.306  Sum_probs=111.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++++.||+|+||.||++.+..+++.||||++....  .+.+.+|+.+++.++ |+||+++++++.+.+.  +||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~--~~lv~   95 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLR-HPNIVRFKEVILTPTH--LAIIM   95 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE--EEEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCC-CCCCCcEEEEEeeCCE--EEEEE
Confidence            678999999999999999999999999999999997533  467889999999999 9999999999998865  99999


Q ss_pred             cCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||+||+|.+++   +.+++..++.++.||+.||+|||++||||++..
T Consensus        96 e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlk  143 (361)
T 3uc3_A           96 EYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLK  143 (361)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCC
T ss_pred             EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            999999999998   679999999999999999999999999998643

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.90  E-value=1.5e-23  Score=180.34  Aligned_cols=120  Identities=19%  Similarity=0.288  Sum_probs=110.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++...   ..+.+.+|+.+++.++ |+||+++++++.+.+.  +|||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~--~~lv   95 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGDE--LWVV   95 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTE--EEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCC-CCCCCeEeEEEEECCE--EEEE
Confidence            57899999999999999999999999999999999643   3567889999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||+||+|.+++  ..+++.++..++.||+.||+|||++||||++..
T Consensus        96 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlk  143 (297)
T 3fxz_A           96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK  143 (297)
T ss_dssp             EECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCC
Confidence            9999999999999  679999999999999999999999999998653

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.90  E-value=1.6e-23  Score=182.60  Aligned_cols=120  Identities=21%  Similarity=0.338  Sum_probs=110.1

Q ss_pred             CCeEEE---eEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          125 DDYEVV---RKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       125 ~~y~~~---~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      ++|++.   +.||+|+||.||+|.+..+++.||||++.......+.+|+.+++.+.+|+||+++++++.+...  .||||
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~--~~lv~   85 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLH--TFLVM   85 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEE
T ss_pred             hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCE--EEEEE
Confidence            456664   7899999999999999999999999999887778889999999999889999999999998865  99999


Q ss_pred             cCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||+||+|.+++   +.+++.++..++.||+.||+|||++||||++..
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  133 (325)
T 3kn6_A           86 ELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLK  133 (325)
T ss_dssp             CCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Confidence            999999999999   569999999999999999999999999998653

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.90  E-value=1.8e-23  Score=184.20  Aligned_cols=119  Identities=22%  Similarity=0.348  Sum_probs=108.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++..        ..+.+.+|+.+++.++ |+||+++++++.+.+. 
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~-  100 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIVELLETYSSDGM-  100 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTE-
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCE-
Confidence            46799999999999999999999999999999999632        3567899999999999 9999999999998865 


Q ss_pred             eeEEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       +|||||||+||+|.+++       ..+++..+..++.||+.||+|||++||||.+.
T Consensus       101 -~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDl  156 (351)
T 3c0i_A          101 -LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDV  156 (351)
T ss_dssp             -EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             -EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence             99999999999998887       14899999999999999999999999999865

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.90  E-value=2.3e-23  Score=181.43  Aligned_cols=119  Identities=14%  Similarity=0.285  Sum_probs=109.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||.||+|++..+|+.||+|+++..      ..+.+.+|+.+++.++ ||||+++++++.+...  +
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~--~   81 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQ--I   81 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSE--E
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCC-CCCCceEeEEEEeCCE--E
Confidence            57899999999999999999999999999999999753      3566889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus        82 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl  132 (318)
T 1fot_A           82 FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDL  132 (318)
T ss_dssp             EEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            9999999999999999   57999999999999999999999999999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.90  E-value=2.8e-23  Score=179.13  Aligned_cols=120  Identities=15%  Similarity=0.249  Sum_probs=110.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++.+.||+|+||.||+|.+..++..||+|++....   .+.+.+|+++++.++ |+||+++++++.+++.  .++|
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~--~~lv   85 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE-HPNVLKFIGVLYKDKR--LNFI   85 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTE--EEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC-CcCcccEEEEEecCCe--eEEE
Confidence            578999999999999999999999999999999986432   567889999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||++||+|.+++    ..+++.++..++.||+.||+|||++||||++..
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlk  135 (310)
T 3s95_A           86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLN  135 (310)
T ss_dssp             EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence            9999999999998    468999999999999999999999999998653

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.90  E-value=3.7e-23  Score=179.21  Aligned_cols=123  Identities=19%  Similarity=0.287  Sum_probs=110.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ..++|++.+.||+|+||.||+|.+..+++.||||+++..    ..+.+.+|+++++.++ |+||+++++++.+.....+|
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~   85 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTRHKV   85 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTCCEE
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCCcceEEEEeecCCCceEE
Confidence            357899999999999999999999999999999999752    3567889999999999 99999999999887644589


Q ss_pred             EEecCCCCCCHHhHcc------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLYP------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l~------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||+||+|.+++.      .+++.++..++.||+.||+|||++||||++..
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlk  139 (319)
T 4euu_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIK  139 (319)
T ss_dssp             EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence            9999999999999992      29999999999999999999999999998654

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.90  E-value=3.2e-23  Score=183.47  Aligned_cols=119  Identities=24%  Similarity=0.347  Sum_probs=109.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++.+.||+|+||.||+|.+..+|+.||+|++....     .+.+.+|+.+++.++ ||||+++++++.+.+.  .|
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~--~~  104 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESF--HY  104 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE--EE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCE--EE
Confidence            467999999999999999999999999999999997532     456889999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||+||+|.+++   ..+++.++..++.||+.||.|||++||||.+.
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dl  154 (362)
T 2bdw_A          105 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNL  154 (362)
T ss_dssp             EEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence            999999999999988   56899999999999999999999999999864

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.90  E-value=2e-23  Score=188.01  Aligned_cols=119  Identities=23%  Similarity=0.302  Sum_probs=109.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||.||+|++..+++.||+|++++.      ..+.+.+|+.+++.++ |+|||++++++.+.+.  +
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~--~  144 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRY--L  144 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCC-CTTBCCEEEEEECSSE--E
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCE--E
Confidence            57899999999999999999999999999999999652      2345889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++  ..+++..++.++.||+.||+|||++||||.+.
T Consensus       145 ~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDL  194 (410)
T 3v8s_A          145 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV  194 (410)
T ss_dssp             EEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence            9999999999999999  67999999999999999999999999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.90  E-value=4.7e-23  Score=181.36  Aligned_cols=121  Identities=19%  Similarity=0.310  Sum_probs=109.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||.||+|++..+++.||||+++...      .+.+.+|+.++..+.+||||+++++++.+.+.  +
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~--~   85 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR--L   85 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--E
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCE--E
Confidence            578999999999999999999999999999999997532      35578999999998449999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||.+..
T Consensus        86 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  137 (345)
T 3a8x_A           86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK  137 (345)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence            9999999999999998   679999999999999999999999999998643

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.90  E-value=3.5e-23  Score=180.44  Aligned_cols=120  Identities=20%  Similarity=0.329  Sum_probs=110.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+..+|..||+|+++..         ..+.+.+|+.+|+.++ ||||+++++++.+...
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~   88 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTD   88 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCE
Confidence            46799999999999999999999999999999999643         2467899999999999 9999999999998865


Q ss_pred             ceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        +|||||||+||+|.+++   ..+++.++..++.||+.||.|||++||||++..
T Consensus        89 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlk  141 (326)
T 2y0a_A           89 --VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK  141 (326)
T ss_dssp             --EEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             --EEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCC
Confidence              99999999999999999   569999999999999999999999999998653

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.90  E-value=4.5e-23  Score=183.60  Aligned_cols=120  Identities=15%  Similarity=0.188  Sum_probs=110.4

Q ss_pred             CCCCeEEEeEeeec--CceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          123 DQDDYEVVRKVGRG--KYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       123 ~~~~y~~~~~lG~G--~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      ..++|++++.||+|  +||.||+|++..+|+.||||+++...     .+.+.+|+.+++.++ |+|||++++++.+.+. 
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~-  100 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNE-  100 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTE-
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCC-CCCCCcEeEEEEECCE-
Confidence            46789999999999  99999999999999999999997532     456788999999999 9999999999998865 


Q ss_pred             eeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       +|||||||+||+|.+++     ..+++..++.++.||+.||+|||++||||++.
T Consensus       101 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDl  154 (389)
T 3gni_B          101 -LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSV  154 (389)
T ss_dssp             -EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence             99999999999999998     46899999999999999999999999999864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.90  E-value=5.7e-23  Score=180.95  Aligned_cols=121  Identities=17%  Similarity=0.227  Sum_probs=110.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|+++.+|+.||||+++..      ..+.+.+|..++..+.+||||+++++++.+.+.  +
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~--~   93 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN--L   93 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE--E
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE--E
Confidence            67899999999999999999999999999999999753      356678999999987339999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||.+..
T Consensus        94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  145 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLK  145 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence            9999999999999999   679999999999999999999999999998643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.89  E-value=4.4e-23  Score=181.92  Aligned_cols=120  Identities=18%  Similarity=0.291  Sum_probs=110.6

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..++|++++.||+|+||.||+|++..+|+.||||+++..      ..+.+.+|+.+|+.++ ||||+++++++.+.+.  
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~--  115 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--  115 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSE--
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCE--
Confidence            367899999999999999999999999999999999643      3467889999999998 9999999999998865  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus       116 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl  167 (350)
T 1rdq_E          116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL  167 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccC
Confidence            99999999999999999   67999999999999999999999999999865

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.89  E-value=4.3e-23  Score=187.60  Aligned_cols=120  Identities=22%  Similarity=0.339  Sum_probs=108.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+..+|+.+|+|++....     .+.+.+|+.+++.++ |||||++++++.+.+.  +|
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~--~~   86 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK-HPNIVRLHDSISEEGH--HY   86 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCC-BTTBCCEEEEEECSSE--EE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC-CcCCCeEEEEEEECCE--EE
Confidence            468999999999999999999999999999999997543     456889999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||+||+|.+++   +.+++.++..++.||+.||+|||++||||.+..
T Consensus        87 lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlK  137 (444)
T 3soa_A           87 LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLK  137 (444)
T ss_dssp             EEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCS
T ss_pred             EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            999999999999998   679999999999999999999999999998653

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.89  E-value=4.6e-23  Score=184.82  Aligned_cols=120  Identities=18%  Similarity=0.311  Sum_probs=109.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||+||+|+++.+++.||+|++++..      .+.+.+|..+|..+.+|||||++++++.+.+.  +
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~--~  128 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR--L  128 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE--E
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE--E
Confidence            578999999999999999999999999999999997532      34578999999988449999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++   +.+++..++.|+.||+.||+|||++||||.+.
T Consensus       129 ~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDL  179 (396)
T 4dc2_A          129 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL  179 (396)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             EEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccC
Confidence            9999999999999998   67999999999999999999999999999864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.89  E-value=4.8e-23  Score=178.40  Aligned_cols=122  Identities=16%  Similarity=0.208  Sum_probs=105.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC-----
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS-----  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~-----  194 (252)
                      .++|++++.||+|+||.||+|++..+|+.||||+++..    ..+.+.+|+++|++++ |||||++++++.+...     
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~   83 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE-HPGIVRYFNAWLETPPEKWQE   83 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCC-CTTBCCEEEEEEECCSCHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCC-CCCEeeEEEEEEEeccchhhh
Confidence            46799999999999999999999999999999999742    2467899999999999 9999999999865432     


Q ss_pred             --------------------------------------------------ceeEEEecCCCCCCHHhHc------cCCCH
Q 025443          195 --------------------------------------------------KTPSLIFEYVNSTDFKVLY------PTLTD  218 (252)
Q Consensus       195 --------------------------------------------------~~~~lV~E~~~gg~L~~~l------~~l~~  218 (252)
                                                                        ..++||||||+||+|.+++      ....+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  163 (332)
T 3qd2_B           84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH  163 (332)
T ss_dssp             HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred             hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence                                                              1389999999999999998      23567


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          219 YDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       219 ~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ..+..++.||+.||+|||++||||.+..
T Consensus       164 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  191 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLHSKGLMHRDLK  191 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence            7789999999999999999999998653

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.89  E-value=2.6e-23  Score=182.81  Aligned_cols=119  Identities=22%  Similarity=0.296  Sum_probs=107.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      .++|++.+.||+|+||.||+|.+..+|+.||||+++.... ...+|++++.++.+||||+++++++.+.+.  +||||||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~--~~lv~E~   97 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-DPTEEIEILLRYGQHPNIITLKDVYDDGKY--VYVVTEL   97 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-CCHHHHHHHHHHTTSTTBCCEEEEEECSSE--EEEEECC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-ChHHHHHHHHHhcCCCCcCeEEEEEEcCCE--EEEEEeC
Confidence            5689999999999999999999999999999999976532 346799999998559999999999998865  9999999


Q ss_pred             CCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+||+|.+++   +.+++.++..++.||+.||+|||++||||++.
T Consensus        98 ~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDl  142 (342)
T 2qr7_A           98 MKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDL  142 (342)
T ss_dssp             CCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccC
Confidence            9999999998   56999999999999999999999999999864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.89  E-value=3.7e-23  Score=184.73  Aligned_cols=120  Identities=17%  Similarity=0.324  Sum_probs=110.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||.||+|.+..+++.||+|++...      ..+.+.+|+.+|+.++ |||||+++++|.+.+.  +
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~--~   90 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVNLWYSFQDEED--M   90 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE--E
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCE--E
Confidence            57899999999999999999999999999999999642      3567889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||||.||+|.+++   ..+++..++.|+.||+.||.|||++||||.+..
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlk  142 (384)
T 4fr4_A           91 FMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMK  142 (384)
T ss_dssp             EEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCc
Confidence            9999999999999999   479999999999999999999999999998653

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.89  E-value=8.9e-23  Score=182.38  Aligned_cols=120  Identities=19%  Similarity=0.319  Sum_probs=110.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++++.||+|+||.||+|.+..+|+.||+|++....   ...+.+|+.+|+.++ |+||+++++++.+...  +|||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~--~~lv  126 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYE--MVLI  126 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCC-STTBCCEEEEEECSSE--EEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCC-CcCCCeEEEEEEeCCE--EEEE
Confidence            478999999999999999999999999999999997543   456889999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||+||+|.+++    ..+++.++..++.||+.||+|||++||||++..
T Consensus       127 ~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlk  176 (387)
T 1kob_A          127 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIK  176 (387)
T ss_dssp             EECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccc
Confidence            9999999999998    268999999999999999999999999998653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.89  E-value=7.8e-23  Score=174.57  Aligned_cols=120  Identities=18%  Similarity=0.310  Sum_probs=110.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|.+.+.||+|+||.||+|.+..++..+|+|++...    ..+.+.+|+++++.++ |+||+++++++.+...  +|+
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~--~~l   97 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD-HPNIIKIFEVFEDYHN--MYI   97 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE--EEE
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCC-CchHHhHHHheecCCe--EEE
Confidence            47899999999999999999999999999999999753    2577899999999999 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          200 IFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||++||+|.+++       ..+++..+..++.||+.||+|||++||||++..
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dik  151 (285)
T 3is5_A           98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLK  151 (285)
T ss_dssp             EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCC
Confidence            99999999999988       469999999999999999999999999998654

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.89  E-value=6.6e-23  Score=186.02  Aligned_cols=119  Identities=21%  Similarity=0.300  Sum_probs=109.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||+||+|++..+++.||+|++++..      ...+.+|+.++..++ |+||+++++++.+.+.  +
T Consensus        73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~--~  149 (437)
T 4aw2_A           73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-SKWITTLHYAFQDDNN--L  149 (437)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSC-TTTBCCEEEEEECSSE--E
T ss_pred             hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCE--E
Confidence            578999999999999999999999999999999997522      334889999999999 9999999999999865  9


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++    +.+++..++.|+.||+.||+|||++||||.+.
T Consensus       150 ~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDL  201 (437)
T 4aw2_A          150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDI  201 (437)
T ss_dssp             EEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccc
Confidence            9999999999999999    46999999999999999999999999999864

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.89  E-value=1.1e-22  Score=181.95  Aligned_cols=123  Identities=19%  Similarity=0.287  Sum_probs=111.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||+++..    ..+.+.+|+++++.++ |+||+++++++.+.+....|
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~~~   85 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTRHKV   85 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTCCEE
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCCCCeEEEeeccCCCCeeE
Confidence            357899999999999999999999999999999999753    3567889999999999 99999999999987644589


Q ss_pred             EEecCCCCCCHHhHcc------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLYP------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l~------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||+||+|.+++.      .+++..+..++.||+.||+|||++||||++..
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  139 (396)
T 4eut_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIK  139 (396)
T ss_dssp             EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcC
Confidence            9999999999999992      29999999999999999999999999998654

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.89  E-value=9e-23  Score=174.53  Aligned_cols=118  Identities=25%  Similarity=0.444  Sum_probs=105.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++|++++.||+|+||+||+|.+..+++.||+|+++...     .+.+.+|+.+++.++ |+||+++++++.+++.  +||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~l   78 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKK--LTL   78 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTE--EEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCC-CCCEeeEEeEEEeCCE--EEE
Confidence            58999999999999999999999999999999997432     367889999999999 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          200 IFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||++ +|.+.+    +.+++..++.++.||+.||+|||++||||.+..
T Consensus        79 v~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dik  128 (292)
T 3o0g_A           79 VFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLK  128 (292)
T ss_dssp             EEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            9999985 555555    579999999999999999999999999998653

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.89  E-value=9.4e-23  Score=179.50  Aligned_cols=120  Identities=25%  Similarity=0.329  Sum_probs=104.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++.. ..+.+.+|+.+|++++ |+||+++++++.+.+.  ++||||
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~--~~lv~e  128 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTE--ISLVLE  128 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCC-CTTBCCEEEEEECSSE--EEEEEC
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCC-CCCCcceeeeEecCCe--EEEEEE
Confidence            57899999999999999999999999999999999764 3566889999999999 9999999999998865  999999


Q ss_pred             CCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          203 YVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       203 ~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |++||+|.+++   +.+++.++..++.||+.||+|||++||||++..
T Consensus       129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dik  175 (349)
T 2w4o_A          129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLK  175 (349)
T ss_dssp             CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence            99999999998   468999999999999999999999999998653

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.89  E-value=1.5e-22  Score=176.93  Aligned_cols=121  Identities=21%  Similarity=0.300  Sum_probs=110.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..++|.+.+.||+|+||.||++.+..+++.||+|++...      ..+.+.+|+.+++.++ |+||+++++++.+.+.  
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--  115 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDF--  115 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE--
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCe--
Confidence            367899999999999999999999999999999999653      2466889999999999 9999999999998865  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||||++|++|.+++   ..+++.++..++.||+.||+|||++||||++..
T Consensus       116 ~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlk  168 (335)
T 2owb_A          116 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK  168 (335)
T ss_dssp             EEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             EEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCC
Confidence            99999999999999998   579999999999999999999999999998654

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.89  E-value=9.1e-23  Score=180.19  Aligned_cols=120  Identities=18%  Similarity=0.216  Sum_probs=110.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||.||+|++..+++.||||+++..      ..+.+.+|..++..+..|+||+++++++.+.+.  +
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~--~   96 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR--L   96 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE--E
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE--E
Confidence            67899999999999999999999999999999999753      346688999999998559999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus        97 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDl  147 (353)
T 2i0e_A           97 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL  147 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccC
Confidence            9999999999999999   67999999999999999999999999999864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.89  E-value=4.1e-23  Score=178.45  Aligned_cols=123  Identities=18%  Similarity=0.237  Sum_probs=109.8

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc-
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK-  195 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~-  195 (252)
                      ..++|++.+.||+|+||.||+|.+..+++.||||+++...      ...+.+|+.+++.++ |+||+++++++...... 
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~   88 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETPAG   88 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCC-CTTBCCEEEEEEEEETTE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCC-CCCcceEEEeeeccCCCC
Confidence            3678999999999999999999999999999999997532      346889999999999 99999999998865431 


Q ss_pred             -eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 -TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 -~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                       ..|||||||+||+|.+++   +.+++.++..++.||+.||+|||++||||++..
T Consensus        89 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk  143 (311)
T 3ork_A           89 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVK  143 (311)
T ss_dssp             EEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             cccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence             359999999999999998   579999999999999999999999999998654

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.89  E-value=2.1e-22  Score=171.12  Aligned_cols=121  Identities=23%  Similarity=0.329  Sum_probs=110.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++....     .+.+.+|+.+++.++ |+||+++++++.+.+.  .
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~   80 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESF--H   80 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE--E
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEcCCE--E
Confidence            3678999999999999999999999999999999996532     456889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ++||||++||+|.+++   ..+++..+..++.||+.||.|||++||||++..
T Consensus        81 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dik  132 (284)
T 3kk8_A           81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK  132 (284)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCC
Confidence            9999999999999888   679999999999999999999999999998653

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.89  E-value=6.6e-23  Score=184.70  Aligned_cols=119  Identities=23%  Similarity=0.290  Sum_probs=109.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||++++..      .+.+.+|+.++..++ |+||+++++++.+.+.  +
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~--~  136 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD-RRWITQLHFAFQDENY--L  136 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSC-TTTBCCEEEEEECSSE--E
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEeeCCE--E
Confidence            578999999999999999999999999999999997522      345789999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++    ..+++..++.++.||+.||+|||++||||.+.
T Consensus       137 ~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDL  188 (412)
T 2vd5_A          137 YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDI  188 (412)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccc
Confidence            9999999999999999    36999999999999999999999999999864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.89  E-value=4.3e-23  Score=176.62  Aligned_cols=122  Identities=20%  Similarity=0.273  Sum_probs=108.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEE----EcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGI----NVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++++.||+|+||.||+|+    +..+++.||||++....   .+.+.+|+++++.++ |+||+++++++...+.+.
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~   87 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRRN   87 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECHHHHTS
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCCCc
Confidence            6789999999999999999998    56689999999997543   457889999999999 999999999987543344


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ++||||||++|+|.+++    ..+++..+..++.||+.||+|||++||||.+..
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dik  141 (295)
T 3ugc_A           88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA  141 (295)
T ss_dssp             CEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             eEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence            89999999999999999    349999999999999999999999999998653

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.89  E-value=1.3e-22  Score=172.04  Aligned_cols=120  Identities=18%  Similarity=0.293  Sum_probs=110.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec---cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP---VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~---~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++.+.||+|+||.||+|.+..++..+|+|++..   ...+.+.+|+++++.++ |+||+++++++.+.+.  +|+|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv   84 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD-HPNIIRLYETFEDNTD--IYLV   84 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE--EEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCe--EEEE
Confidence            4679999999999999999999999999999999975   34678899999999998 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||++|++|.+++   +.+++.++..++.||+.||+|||++||+|++..
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlk  133 (277)
T 3f3z_A           85 MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK  133 (277)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCC
Confidence            9999999999988   679999999999999999999999999998654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.89  E-value=1.2e-22  Score=187.13  Aligned_cols=120  Identities=24%  Similarity=0.352  Sum_probs=108.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----------------chHHHHHHHHHHHhcCCCCcceeeee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----------------KKKKIKREIKILQNLCGGPNVVKLLD  187 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----------------~~~~~~~Ei~il~~l~~h~nIv~l~~  187 (252)
                      .++|++++.||+|+||.||+|.+..++..||+|++...                ..+.+.+|+.+|+.++ |||||++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~  113 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-HPNIIKLFD  113 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCC-CTTBCCEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC-CCCCCeEEE
Confidence            57899999999999999999999999999999999642                2456889999999999 999999999


Q ss_pred             EEEcCCCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          188 IVRDQHSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       188 ~~~~~~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ++.+...  +|||||||+||+|.+++   ..+++..+..++.||+.||.|||++||||++..
T Consensus       114 ~~~~~~~--~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlk  173 (504)
T 3q5i_A          114 VFEDKKY--FYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIK  173 (504)
T ss_dssp             EEECSSE--EEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEcCCE--EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCc
Confidence            9998865  99999999999999998   679999999999999999999999999998643

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.89  E-value=6.6e-23  Score=179.93  Aligned_cols=119  Identities=18%  Similarity=0.323  Sum_probs=108.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++...      ..+.+.+|+.+++.++ ||||+++++++.+.+.  +
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~--~   84 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HPHIIKLYDVITTPTD--I   84 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCC-CTTBCCEEEEEECSSE--E
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCE--E
Confidence            57899999999999999999999999999999999643      2457889999999999 9999999999999865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||+ +|+|.+++   +.+++.+++.++.||+.||.|||++||||.+..
T Consensus        85 ~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlk  135 (336)
T 3h4j_B           85 VMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLK  135 (336)
T ss_dssp             EEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCS
T ss_pred             EEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCc
Confidence            9999999 68998888   679999999999999999999999999998653

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.89  E-value=2.2e-22  Score=172.13  Aligned_cols=122  Identities=21%  Similarity=0.295  Sum_probs=111.1

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|++...      ..+.+.+|+.+++.++ |+||+++++++.+.+. 
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~-   89 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDF-   89 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE-
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCE-
Confidence            4467899999999999999999999999999999999643      2456889999999998 9999999999998865 


Q ss_pred             eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                       .++||||++|++|.+++   ..+++.++..++.||+.||+|||++||+|++..
T Consensus        90 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~  142 (294)
T 2rku_A           90 -VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK  142 (294)
T ss_dssp             -EEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             -EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence             99999999999999998   579999999999999999999999999998654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.89  E-value=1.4e-22  Score=171.70  Aligned_cols=121  Identities=15%  Similarity=0.189  Sum_probs=109.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||+|+++..     ....+.+|+.++..+.+|+||+++++++.+.+.  ++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~--~~   87 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH--ML   87 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTE--EE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe--EE
Confidence            46899999999999999999999999999999999753     246788999999999339999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||++||+|.+++       ..+++.++..++.||+.||+|||++||||++..
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dik  142 (289)
T 1x8b_A           88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIK  142 (289)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCC
Confidence            999999999999998       348999999999999999999999999998653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.89  E-value=1e-22  Score=177.46  Aligned_cols=120  Identities=17%  Similarity=0.200  Sum_probs=107.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc---EEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE---RCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++.+.||+|+||.||+|.+..++.   .||||+++...    .+.+.+|+.+++.++ |+||+++++++.+.+.  
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--  124 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD-HPNIIRLEGVVTRGRL--  124 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECGGGC--
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCc--
Confidence            5789999999999999999999986554   59999997532    456889999999999 9999999999988866  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||||++||+|.+++    ..+++.++..++.||+.||+|||++||||++..
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlk  178 (325)
T 3kul_A          125 AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLA  178 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             cEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence            99999999999999998    479999999999999999999999999998653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.89  E-value=1.5e-22  Score=171.85  Aligned_cols=120  Identities=22%  Similarity=0.333  Sum_probs=110.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..++..||+|++...      ....+.+|+.+++.++ |+||+++++++.+.+.  .
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~   84 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATR--V   84 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSE--E
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCC-CCCCcchhheEecCCE--E
Confidence            67899999999999999999999999999999999642      2456889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ++||||+++|+|.+++   ..+++..+..++.||+.||+|||++||+|++..
T Consensus        85 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlk  136 (279)
T 3fdn_A           85 YLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK  136 (279)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCC
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCC
Confidence            9999999999999998   679999999999999999999999999998654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.89  E-value=2.6e-22  Score=171.73  Aligned_cols=122  Identities=23%  Similarity=0.322  Sum_probs=110.6

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------------hHHHHHHHHHHHhcCCCCcceeeeeEEE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------------KKKIKREIKILQNLCGGPNVVKLLDIVR  190 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------~~~~~~Ei~il~~l~~h~nIv~l~~~~~  190 (252)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||+++...            .+.+.+|+.+++++.+|+||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            4688999999999999999999999999999999996432            3567899999999966999999999998


Q ss_pred             cCCCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          191 DQHSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       191 ~~~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +.+.  .+|||||+++|+|.+++   ..+++..+..++.||+.||+|||++||+|++..
T Consensus        95 ~~~~--~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  151 (298)
T 1phk_A           95 TNTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLK  151 (298)
T ss_dssp             CSSE--EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             cCCe--EEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            8855  99999999999999999   579999999999999999999999999998654

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.89  E-value=1.5e-22  Score=179.66  Aligned_cols=121  Identities=17%  Similarity=0.261  Sum_probs=106.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-------CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-------NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      .++|++++.||+|+||.||+|.+.       .++..||||+++...    .+.+.+|+.+|+.+.+|+||+++++++.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            578999999999999999999975       345679999997542    456889999999993399999999999988


Q ss_pred             CCceeEEEecCCCCCCHHhHc--c-----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLY--P-----------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l--~-----------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +.  +||||||++||+|.+++  .                 .+++.++..++.||+.||+|||++||||.+..
T Consensus       160 ~~--~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  230 (370)
T 2psq_A          160 GP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA  230 (370)
T ss_dssp             SS--CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             CC--EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence            66  99999999999999998  1                 37899999999999999999999999998653

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.89  E-value=1.3e-22  Score=176.12  Aligned_cols=120  Identities=20%  Similarity=0.319  Sum_probs=110.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+..+|+.||+|+++..         ..+.+.+|+.+++.++ |+||+++++++.+.+.
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~   89 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVITLHDVYENRTD   89 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCE
Confidence            46799999999999999999999999999999999643         2467899999999999 9999999999998865


Q ss_pred             ceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        +|+||||++||+|.+++   ..+++..+..++.||+.||+|||++||||++..
T Consensus        90 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dik  142 (321)
T 2a2a_A           90 --VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK  142 (321)
T ss_dssp             --EEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             --EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence              99999999999999999   468999999999999999999999999998653

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.89  E-value=2.1e-22  Score=172.64  Aligned_cols=123  Identities=18%  Similarity=0.278  Sum_probs=110.7

Q ss_pred             cCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       121 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ....++|++++.||+|+||.||+|.+..++..||+|++...   ..+.+.+|+.+++.++ |+||+++++++.+.+.  +
T Consensus        15 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~   91 (302)
T 2j7t_A           15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD-HPYIVKLLGAYYHDGK--L   91 (302)
T ss_dssp             SCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCC-CTTBCCEEEEEECC-C--E
T ss_pred             cCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCC-CCCEeeeeeeeeeCCe--E
Confidence            34568999999999999999999999999999999999643   3577899999999999 9999999999998866  9


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ++||||+++|+|.+++    ..+++..+..++.||+.||.|||++||||++..
T Consensus        92 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  144 (302)
T 2j7t_A           92 WIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK  144 (302)
T ss_dssp             EEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             EEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence            9999999999999987    569999999999999999999999999998654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.89  E-value=2.8e-22  Score=171.82  Aligned_cols=122  Identities=25%  Similarity=0.300  Sum_probs=107.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEE----EcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGI----NVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      ..+|++++.||+|+||.||+|.    +..+++.||+|+++..    ..+.+.+|+.+++.++ |+||+++++++.+.+..
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~   98 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGN   98 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCC-CTTBCCEEEEEEC---C
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCC-CCCeeeeeeEEecCCCc
Confidence            5679999999999999999999    5678999999999743    3467899999999999 99999999999987544


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .+++||||+++|+|.+++    ..+++.++..++.||+.||+|||++||||++..
T Consensus        99 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dik  153 (302)
T 4e5w_A           99 GIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLA  153 (302)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             eEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCc
Confidence            599999999999999998    469999999999999999999999999998653

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.89  E-value=1.4e-22  Score=172.73  Aligned_cols=120  Identities=12%  Similarity=0.187  Sum_probs=108.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC-------cEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN-------ERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-------~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~  193 (252)
                      .++|++.+.||+|+||.||+|.+..++       ..||+|+++..   ..+.+.+|+.+++.++ |+||+++++++.+++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~   85 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLS-HKHLVLNYGVCVCGD   85 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSC-CTTBCCEEEEECCTT
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEEeCC
Confidence            578999999999999999999998777       47999999653   3567899999999999 999999999999886


Q ss_pred             CceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          194 SKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       194 ~~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .  .+|||||++||+|.+++    ..+++..+..++.||+.||.|||++||||++..
T Consensus        86 ~--~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlk  140 (289)
T 4fvq_A           86 E--NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVC  140 (289)
T ss_dssp             C--CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             C--CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcC
Confidence            6  89999999999999999    239999999999999999999999999998653

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.89  E-value=1.5e-22  Score=174.69  Aligned_cols=121  Identities=17%  Similarity=0.285  Sum_probs=109.2

Q ss_pred             CCCeEEE-eEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVV-RKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++. +.||+|+||.||+|.+..+++.||||+++..   ..+.+.+|+.++.++.+|+||+++++++.+.+.  +||
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~--~~l   88 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDR--FYL   88 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE--EEE
Confidence            5789985 7899999999999999999999999999653   356789999999996459999999999998865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||+||+|.+++   ..+++..+..++.||+.||+|||++||||.+..
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlk  138 (316)
T 2ac3_A           89 VFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK  138 (316)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCC
Confidence            99999999999999   579999999999999999999999999998653

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.89  E-value=1.4e-22  Score=176.61  Aligned_cols=120  Identities=22%  Similarity=0.351  Sum_probs=104.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc---CCCcEEEEEEeecc-------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV---NTNERCIIKILKPV-------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~-------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~  193 (252)
                      .++|++.+.||+|+||.||+|++.   .+++.||+|+++..       ....+.+|+.+|+.++ |+||+++++++.+.+
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~   94 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFIVDLIYAFQTGG   94 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCC-CTTBCCEEEEEECSS
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCC-CCCccceeEEEEcCC
Confidence            578999999999999999999985   68999999999753       2345788999999999 999999999999987


Q ss_pred             CceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          194 SKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       194 ~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .  +|||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||.+..
T Consensus        95 ~--~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlk  148 (327)
T 3a62_A           95 K--LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLK  148 (327)
T ss_dssp             C--EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             E--EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCC
Confidence            6  99999999999999998   579999999999999999999999999998653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.89  E-value=2.3e-22  Score=169.86  Aligned_cols=119  Identities=14%  Similarity=0.268  Sum_probs=108.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||+|.+. ++..||+|++...  ..+.+.+|++++++++ |+||+++++++.+.+.  +|+||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~   84 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAP--ICLVF   84 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS--EEEEE
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCc--eEEEE
Confidence            578999999999999999999985 5778999999754  3677899999999999 9999999999998876  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||++||+|.+++    ..+++..+..++.|++.||+|||++||+|++..
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dik  133 (269)
T 4hcu_A           85 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA  133 (269)
T ss_dssp             ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcc
Confidence            999999999999    348999999999999999999999999998654

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.89  E-value=2e-22  Score=171.17  Aligned_cols=119  Identities=22%  Similarity=0.367  Sum_probs=109.5

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      ++|++.+.||+|+||.||+|.+..+++.||+|+++..         ..+.+.+|+.+++.++ |+||+++++++.+... 
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~-   82 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLHDIFENKTD-   82 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE-
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCC-CCCeeehhheecCCCe-
Confidence            5799999999999999999999999999999999643         2567899999999999 9999999999998865 


Q ss_pred             eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                       .++||||+++++|.+++   ..+++.++..++.||+.||.|||++||||++..
T Consensus        83 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  135 (283)
T 3bhy_A           83 -VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLK  135 (283)
T ss_dssp             -EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             -EEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence             99999999999999999   579999999999999999999999999998643

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.88  E-value=7.5e-23  Score=182.02  Aligned_cols=120  Identities=17%  Similarity=0.295  Sum_probs=101.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHH-HHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKI-LQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~i-l~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++++.||+|+||.||+|+++.+++.||||++++..      ...+.+|..+ ++.++ |+|||++++++.+.+.  
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~-hp~Iv~l~~~~~~~~~--  113 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADK--  113 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCC-CTTBCCEEEEEECSSE--
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEeCCE--
Confidence            578999999999999999999999999999999997532      3456677776 46677 9999999999999865  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +|||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||++..
T Consensus       114 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlk  166 (373)
T 2r5t_A          114 LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLK  166 (373)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence            99999999999999998   579999999999999999999999999998643

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.88  E-value=2.2e-22  Score=173.37  Aligned_cols=120  Identities=27%  Similarity=0.427  Sum_probs=108.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+..+|+.||+|++....     .+.+.+|+.+++.++ |+||+++++++.+.+.  ++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~--~~   78 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPNLVNLLEVFRRKRR--LH   78 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTE--EE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCC-CCCccchhheeecCCe--EE
Confidence            468999999999999999999999999999999986432     456789999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||++++|.+++   ..+++..+..++.||+.||+|||++||||++..
T Consensus        79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlk  129 (311)
T 4agu_A           79 LVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVK  129 (311)
T ss_dssp             EEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence            999999999999887   569999999999999999999999999998653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.88  E-value=8.9e-23  Score=181.36  Aligned_cols=120  Identities=21%  Similarity=0.324  Sum_probs=109.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++...    .+.+.+|+++|+.++ |+||+++++++.+.+.  +||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~--~~l  189 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQP--IYI  189 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCC-CTTBCCEEEEECSSSS--CEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEecCCC--cEE
Confidence            578999999999999999999999899999999997532    346789999999999 9999999999988866  999


Q ss_pred             EecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          200 IFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||+||+|.+++    ..+++.++..++.||+.||+|||++||||.+..
T Consensus       190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlk  240 (377)
T 3cbl_A          190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLA  240 (377)
T ss_dssp             EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccC
Confidence            99999999999998    359999999999999999999999999998643

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.88  E-value=2.6e-22  Score=172.63  Aligned_cols=120  Identities=20%  Similarity=0.254  Sum_probs=108.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++.+.||+|+||.||+|.+..+|+.||+|+++..   ..+.+.+|+.+++.++ |+||+++++++.+.+.  +|+|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv   84 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK-HENIVTLEDIYESTTH--YYLV   84 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCC-CTTBCCEEEEEECSSE--EEEE
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCC-CCCeeehhhhcccCCE--EEEE
Confidence            46899999999999999999999999999999999754   2456889999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||++||+|.+++   +.+++..+..++.||+.||+|||++||+|++..
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dik  133 (304)
T 2jam_A           85 MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLK  133 (304)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCC
T ss_pred             EEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            9999999999998   679999999999999999999999999998654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.88  E-value=1e-22  Score=186.09  Aligned_cols=135  Identities=16%  Similarity=0.272  Sum_probs=112.6

Q ss_pred             CccccCCCcccccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcce
Q 025443          109 KEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVV  183 (252)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv  183 (252)
                      ..++.++.....+...++|++++.||+|+||.||+|.+..+++.||||++...     ..+++.+|+.+|+.++ |+|||
T Consensus        46 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv  124 (464)
T 3ttj_A           46 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HKNII  124 (464)
T ss_dssp             CCEEEEEC--CEEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCC-CTTBC
T ss_pred             ccceeeecCCcceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCC-CCCCC
Confidence            34444444444555678999999999999999999999999999999999643     2467889999999999 99999


Q ss_pred             eeeeEEEcCCC----ceeEEEecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          184 KLLDIVRDQHS----KTPSLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       184 ~l~~~~~~~~~----~~~~lV~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++++++.....    ..+|||||||+++ |.+.+ ..+++..++.++.||+.||+|||++||||.+.
T Consensus       125 ~l~~~~~~~~~~~~~~~~~lv~E~~~~~-l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDl  190 (464)
T 3ttj_A          125 SLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDL  190 (464)
T ss_dssp             CCSEEECSCCSTTTCCEEEEEEECCSEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             cEEEEEccCCccccCCeEEEEEeCCCCC-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            99999976532    3479999999865 55555 67999999999999999999999999999864

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.88  E-value=1.1e-22  Score=186.40  Aligned_cols=120  Identities=22%  Similarity=0.299  Sum_probs=110.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|.+++.||+|+||.||+|.+..+|+.||||+++..      ..+.+.+|+.+|+.++ |+||+++++++.+.+.  +
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~--~   91 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HPHIIKLYQVISTPSD--I   91 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSE--E
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCE--E
Confidence            57899999999999999999999999999999999643      2457889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||||+||+|.+++   +.+++.+++.++.||+.||+|||++||||++..
T Consensus        92 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLk  143 (476)
T 2y94_A           92 FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLK  143 (476)
T ss_dssp             EEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCS
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCccccc
Confidence            9999999999999999   569999999999999999999999999998653

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.88  E-value=3.7e-22  Score=168.36  Aligned_cols=119  Identities=13%  Similarity=0.235  Sum_probs=108.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++++.||+|+||.||+|.+. ++..||+|+++..  ..+.+.+|+.+++.++ |+||+++++++.+.+.  +++||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~   82 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS-HPKLVKFYGVCSKEYP--IYIVT   82 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS--EEEEE
T ss_pred             hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCc--eEEEE
Confidence            578999999999999999999874 6778999999754  3577899999999999 9999999999988866  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||++||+|.+++    ..+++..+..++.||+.||.|||++||+|++..
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dik  131 (268)
T 3sxs_A           83 EYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLA  131 (268)
T ss_dssp             ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCS
T ss_pred             EccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcC
Confidence            999999999998    359999999999999999999999999998653

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.88  E-value=1.4e-22  Score=186.18  Aligned_cols=120  Identities=23%  Similarity=0.330  Sum_probs=106.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+..++..||+|+++..     ....+.+|+.+|+.++ |||||++++++.+...  +|
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~--~~  112 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD-HPNIMKLYDFFEDKRN--YY  112 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCC-CTTBCCEEEEEECSSE--EE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCE--EE
Confidence            35799999999999999999999999999999999743     2567899999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||+||+|.+++   ..+++..+..++.||+.||.|||++||||++..
T Consensus       113 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlk  163 (494)
T 3lij_A          113 LVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLK  163 (494)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Confidence            999999999999988   679999999999999999999999999998653

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.88  E-value=2.1e-22  Score=181.49  Aligned_cols=119  Identities=18%  Similarity=0.335  Sum_probs=107.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      .++|.+.+.||+|+||.||+|.+..+++.||||++....           ...+.+|+.+|++++ |+||+++++++...
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~  212 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFFDAE  212 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCC-CTTBCCCCEEEESS
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCC-CCCEeeEEEEEecC
Confidence            478999999999999999999999999999999997532           224789999999999 99999999998654


Q ss_pred             CCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .   +|||||||+||+|.+++   +.+++..+..++.||+.||+|||++||||++..
T Consensus       213 ~---~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlk  266 (419)
T 3i6u_A          213 D---YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK  266 (419)
T ss_dssp             E---EEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             c---eEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            3   89999999999999998   579999999999999999999999999998643

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.88  E-value=2.3e-22  Score=170.56  Aligned_cols=120  Identities=16%  Similarity=0.342  Sum_probs=109.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..+|+.||+|++...      ..+.+.+|+.+++.++ |+||+++++++.+.+.  .
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~   86 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HPSILELYNYFEDSNY--V   86 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBC-CTTBCCEEEEEECSSE--E
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCC-CCCeEeEEEEEccCCe--E
Confidence            57899999999999999999999999999999999643      2467899999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||+++++|.+++    ..+++..+..++.||+.||+|||++||+|++..
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  139 (278)
T 3cok_A           87 YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLT  139 (278)
T ss_dssp             EEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCC
T ss_pred             EEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            9999999999999998    458999999999999999999999999998654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.88  E-value=2.3e-22  Score=184.41  Aligned_cols=120  Identities=20%  Similarity=0.336  Sum_probs=110.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP-----VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||+||+|.+..+++.||||++..     .....+.+|+.+|+.++ |||||++++++.+...  +|
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~--~~   97 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSS--FY   97 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE--EE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCC-CCCcCeEEEEEEcCCE--EE
Confidence            4789999999999999999999999999999999963     33567899999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||.||+|.+++   +.+++..+..++.||+.||.|||++||||++..
T Consensus        98 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlk  148 (486)
T 3mwu_A           98 IVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLK  148 (486)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCc
Confidence            999999999999988   689999999999999999999999999998653

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.88  E-value=3.2e-22  Score=169.30  Aligned_cols=120  Identities=22%  Similarity=0.308  Sum_probs=110.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++...      ..+.+.+|+.+++.++ |+||+++++++.+.+.  .
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~   86 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHIIKLYQVISTPTD--F   86 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE--E
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCe--E
Confidence            57899999999999999999999989999999999643      2457889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||+++++|.+++   +.+++..+..++.||+.||.|||++||+|++..
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  138 (276)
T 2h6d_A           87 FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK  138 (276)
T ss_dssp             EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCC
T ss_pred             EEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Confidence            9999999999999998   579999999999999999999999999998654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.88  E-value=2.4e-22  Score=178.65  Aligned_cols=116  Identities=19%  Similarity=0.299  Sum_probs=100.3

Q ss_pred             EEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC
Q 025443          128 EVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV  204 (252)
Q Consensus       128 ~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~  204 (252)
                      ...+.||+|+||.||+|.+..+|..||+|+++...   .+.+.+|+++|++++ |+||+++++++.+.+.  +|||||||
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~--~~lv~E~~  168 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD-HANLIQLYDAFESKND--IVLVMEYV  168 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSE--EEEEEECC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCE--EEEEEeCC
Confidence            33678999999999999999999999999998643   567899999999999 9999999999998865  99999999


Q ss_pred             CCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          205 NSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       205 ~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||+|.+++    ..+++..+..++.||+.||+|||++||||++..
T Consensus       169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  214 (373)
T 2x4f_A          169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLK  214 (373)
T ss_dssp             TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCC
Confidence            999999988    359999999999999999999999999998653

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.88  E-value=4.9e-22  Score=172.82  Aligned_cols=118  Identities=12%  Similarity=0.149  Sum_probs=108.2

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .|+..+.||+|+||.||+|.+..+|+.||||+++..   ..+.+.+|+.+++.++ |+||+++++++...+.  .|||||
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~--~~lv~e  122 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEE--LWVLME  122 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTE--EEEEEC
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCE--EEEEEe
Confidence            488888999999999999999989999999999743   3567889999999999 9999999999998865  999999


Q ss_pred             CCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          203 YVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       203 ~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |++||+|.+++  ..+++..+..++.||+.||+|||++||+|++..
T Consensus       123 ~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlk  168 (321)
T 2c30_A          123 FLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK  168 (321)
T ss_dssp             CCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             cCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            99999999999  579999999999999999999999999998653

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.88  E-value=3e-22  Score=176.80  Aligned_cols=121  Identities=12%  Similarity=0.136  Sum_probs=107.9

Q ss_pred             CCCeEEEeEeeecCceEEEEE-----EEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCC--CCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEG-----INVNTNERCIIKILKPVKKKKIKREIKILQNLCG--GPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~-----~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~--h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|.+.+.||+|+||.||+|     .+..+++.||||+++......+.+|+.+++.++.  |+||+.+++++...+.  
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~--  141 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG--  141 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC--
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC--
Confidence            578999999999999999999     4677899999999988888889999999998874  7999999999999876  


Q ss_pred             eEEEecCCCCCCHHhHc--------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY--------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l--------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .|||||||+||+|.+++        ..+++..+..|+.||+.||+|||++||||.+..
T Consensus       142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiK  199 (365)
T 3e7e_A          142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIK  199 (365)
T ss_dssp             EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCS
T ss_pred             cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCC
Confidence            99999999999999998        259999999999999999999999999998653

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.88  E-value=1.4e-22  Score=184.27  Aligned_cols=123  Identities=31%  Similarity=0.425  Sum_probs=99.2

Q ss_pred             cCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC--
Q 025443          121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH--  193 (252)
Q Consensus       121 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~--  193 (252)
                      |...++|++++.||+|+||+||+|.+..+++.||||++...     ..+++.+|+.+|+.++ |+|||++++++....  
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~  127 (458)
T 3rp9_A           49 WQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN-HDHVVKVLDIVIPKDVE  127 (458)
T ss_dssp             CCSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTT
T ss_pred             CccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCC-CCCCCceEEEEecCCcc
Confidence            34468999999999999999999999999999999999642     2467889999999999 999999999996432  


Q ss_pred             -CceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          194 -SKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       194 -~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       ...+||||||++ |+|.+++   ..+++..++.|+.||+.||+|||++||||.+.
T Consensus       128 ~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDl  182 (458)
T 3rp9_A          128 KFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDL  182 (458)
T ss_dssp             TCCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             cCceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCC
Confidence             134999999995 7999998   46999999999999999999999999999864

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.88  E-value=2.5e-22  Score=183.89  Aligned_cols=120  Identities=22%  Similarity=0.326  Sum_probs=110.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++...      ..+.+.+|+.+|+.++ |||||++++++.+.+.  +
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~--~  101 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGY--F  101 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSE--E
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCE--E
Confidence            46899999999999999999999999999999999642      3567899999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||||.||+|.+++   +.+++..+..++.||+.||.|||++||||++..
T Consensus       102 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlk  153 (484)
T 3nyv_A          102 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLK  153 (484)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence            9999999999999998   679999999999999999999999999998653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.88  E-value=3.5e-22  Score=170.67  Aligned_cols=117  Identities=26%  Similarity=0.421  Sum_probs=105.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++|++++.||+|+||.||+|.+ .+++.||+|+++...     .+.+.+|+.+++.++ |+||+++++++.+.+.  +||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~l   77 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELK-HSNIVKLYDVIHTKKR--LVL   77 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSC--EEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcC-CCCEeeeeeEEccCCe--EEE
Confidence            5899999999999999999999 678999999996432     367889999999999 9999999999998866  999


Q ss_pred             EecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          200 IFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||++ |+|.+++    +.+++..++.++.||+.||+|||++||||++..
T Consensus        78 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  127 (288)
T 1ob3_A           78 VFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK  127 (288)
T ss_dssp             EEECCS-EEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEEecC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            999998 4898888    468999999999999999999999999998653

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.88  E-value=4e-22  Score=169.48  Aligned_cols=119  Identities=16%  Similarity=0.196  Sum_probs=105.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++++.||+|+||.||+|.+. ++..||+|+++..  ..+.+.+|+++++.++ |+||+++++++.+.+.  +|+||
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~   98 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRP--IFIIT   98 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS--EEEEE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCC-CCCEeeEEEEEecCCC--eEEEE
Confidence            578999999999999999999884 6778999999754  3677899999999999 9999999999988866  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||++||+|.+++    ..+++.++..++.||+.||.|||++||+|++..
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dik  147 (283)
T 3gen_A           99 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA  147 (283)
T ss_dssp             CCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCS
T ss_pred             eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCc
Confidence            999999999998    469999999999999999999999999998654

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.88  E-value=2.9e-22  Score=174.73  Aligned_cols=120  Identities=23%  Similarity=0.357  Sum_probs=107.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||.||+|.+.     .+++.||+|+++...    .+.+.+|+.+++.++ |+||+++++++.+.+.
T Consensus        46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~  124 (343)
T 1luf_A           46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD-NPNIVKLLGVCAVGKP  124 (343)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS
T ss_pred             HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEccCCc
Confidence            578999999999999999999997     345899999997543    456889999999998 9999999999988866


Q ss_pred             ceeEEEecCCCCCCHHhHc---------------------------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---------------------------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---------------------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        +||||||++||+|.+++                           ..+++.++..++.||+.||.|||++||||++..
T Consensus       125 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  201 (343)
T 1luf_A          125 --MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA  201 (343)
T ss_dssp             --CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             --eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence              99999999999999998                           248899999999999999999999999998653

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.88  E-value=4.4e-22  Score=169.43  Aligned_cols=120  Identities=18%  Similarity=0.325  Sum_probs=110.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..++..||+|++...      ..+.+.+|+++++.++ |+||+++++++.+.+.  +
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~   89 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMYNYFHDRKR--I   89 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE--E
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCC-CCCEeeEEEEEEcCCE--E
Confidence            57899999999999999999999999999999999642      2467889999999999 9999999999998765  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |+||||+++|+|.+++   +.+++..+..++.||+.||+|||++||+|++..
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  141 (284)
T 2vgo_A           90 YLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK  141 (284)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCS
T ss_pred             EEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence            9999999999999998   579999999999999999999999999998654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.88  E-value=2.7e-22  Score=169.65  Aligned_cols=120  Identities=23%  Similarity=0.306  Sum_probs=109.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||+|+++...    .+.+.+|+.+++.++ |+||+++++++.+.+.  .|+
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~l   82 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVVKFYGHRREGNI--QYL   82 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTE--EEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcC-CCCceeeeeEEEcCCE--EEE
Confidence            467999999999999999999999999999999996432    467889999999999 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||++||+|.+++   ..+++..+..++.||+.||+|||++||+|++..
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  132 (276)
T 2yex_A           83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK  132 (276)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            99999999999999   368999999999999999999999999998653

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.88  E-value=5.4e-22  Score=170.42  Aligned_cols=120  Identities=23%  Similarity=0.339  Sum_probs=110.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .+.|++++.||+|+||.||+|.+..+++.||+|++...    ..+.+.+|+.+++.++ |+||+++++++.+...  +||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~l   97 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTK--LWI   97 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTE--EEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCe--EEE
Confidence            56799999999999999999999999999999999743    3577899999999998 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          200 IFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||++|++|.+++  +.+++..+..++.||+.||.|||++||+|++..
T Consensus        98 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  146 (303)
T 3a7i_A           98 IMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK  146 (303)
T ss_dssp             EEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Confidence            99999999999999  679999999999999999999999999998654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.88  E-value=1.9e-22  Score=175.77  Aligned_cols=118  Identities=27%  Similarity=0.479  Sum_probs=106.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+..+++.||||+++...     .+.+.+|+.+++.++ |+||+++++++.+.+.  +|
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~  109 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ-HRNIIELKSVIHHNHR--LH  109 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCC-CTTBCCEEEEEEETTE--EE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcC-CCCcceEEEEEecCCE--EE
Confidence            678999999999999999999999999999999996433     345779999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||+ |+|.+++   ..+++..++.++.||+.||+|||++||||++.
T Consensus       110 lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dl  158 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDL  158 (329)
T ss_dssp             EEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             EEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCC
Confidence            9999998 5999998   56999999999999999999999999999864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.88  E-value=2.1e-22  Score=178.43  Aligned_cols=119  Identities=17%  Similarity=0.250  Sum_probs=105.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEE-----EcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGI-----NVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~-----~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||.||+|.     +..++..||||+++..    ....+.+|+.+++.++ |+|||++++++.+...
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~  148 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLP  148 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCC
Confidence            5789999999999999999999     4457789999999643    2456889999999999 9999999999998866


Q ss_pred             ceeEEEecCCCCCCHHhHc----------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY----------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l----------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        .|||||||+||+|.+++          ..+++.++..++.||+.||+|||++||||++.
T Consensus       149 --~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  207 (367)
T 3l9p_A          149 --RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDI  207 (367)
T ss_dssp             --CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             --CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence              89999999999999998          13899999999999999999999999999864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.88  E-value=2.2e-22  Score=176.63  Aligned_cols=122  Identities=21%  Similarity=0.301  Sum_probs=106.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEE-----EcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGI-----NVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~-----~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.     +..+++.||||+++...    .+.+.+|++++.++..|+||+++++++.+.+ 
T Consensus        21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-   99 (359)
T 3vhe_A           21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-   99 (359)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT-
T ss_pred             ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC-
Confidence            5789999999999999999999     45567899999997532    3568999999999954999999999998754 


Q ss_pred             ceeEEEecCCCCCCHHhHc---cC--------------------------------------------------------
Q 025443          195 KTPSLIFEYVNSTDFKVLY---PT--------------------------------------------------------  215 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~~--------------------------------------------------------  215 (252)
                      ..++||||||+||+|.+++   ..                                                        
T Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (359)
T 3vhe_A          100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  179 (359)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred             CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence            3489999999999999998   11                                                        


Q ss_pred             ----------CCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          216 ----------LTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       216 ----------l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                                +++..+..++.||+.||.|||++||||.+..
T Consensus       180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dik  220 (359)
T 3vhe_A          180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  220 (359)
T ss_dssp             ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             ccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence                      8999999999999999999999999998643

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.88  E-value=3.1e-22  Score=174.40  Aligned_cols=122  Identities=25%  Similarity=0.360  Sum_probs=110.5

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ...++|++++.||+|+||.||+|.+..+|+.||||++....     .+.+.+|+.+++.++ |+||+++++++.+.+.  
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--   98 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR-HENLVNLLEVCKKKKR--   98 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTE--
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCC-CCCEeeEEEEeecCCE--
Confidence            44789999999999999999999999999999999986432     345789999999999 9999999999998865  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||||+++++|.+++   +.+++..+..++.||+.||+|||++||||++..
T Consensus        99 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlk  151 (331)
T 4aaa_A           99 WYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIK  151 (331)
T ss_dssp             EEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcC
Confidence            99999999999999886   679999999999999999999999999998654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.88  E-value=2.9e-22  Score=173.81  Aligned_cols=119  Identities=19%  Similarity=0.336  Sum_probs=106.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||||++....           ...+.+|+++|+.++ |+||+++++++...
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~   87 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCC-CTTBCCEEEEEESS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCC-CCCCceEeeEEcCC
Confidence            468999999999999999999999999999999996432           235789999999999 99999999999765


Q ss_pred             CCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .   .|+||||++||+|.+++   ..+++..+..++.||+.||.|||++||||++..
T Consensus        88 ~---~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk  141 (322)
T 2ycf_A           88 D---YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK  141 (322)
T ss_dssp             S---EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             c---eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            3   89999999999999988   579999999999999999999999999998653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.88  E-value=6.2e-22  Score=172.05  Aligned_cols=122  Identities=20%  Similarity=0.257  Sum_probs=109.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEE----EcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGI----NVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++++.||+|+||.||+|+    +..++..||||++....   .+.+.+|+++++.++ |+||+++++++...+.+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~  100 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH-SDFIVKYRGVSYGPGRQS  100 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSSCE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCCce
Confidence            5789999999999999999999    46789999999997543   456899999999998 999999999998655566


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||||++||+|.+++    ..+++..+..++.||+.||+|||++||||++..
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dik  154 (327)
T 3lxl_A          101 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLA  154 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence            99999999999999998    359999999999999999999999999998653

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=2e-22  Score=176.03  Aligned_cols=120  Identities=18%  Similarity=0.295  Sum_probs=107.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++.+.||+|+||.||+|.+..++..||+|++...        ..+.+.+|+++++.++ |+||+++++++.+.+. 
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~-  102 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQY-  102 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE-
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCC-CCCcceeehhhccCCe-
Confidence            57899999999999999999999999999999999642        2467899999999999 9999999999998865 


Q ss_pred             eeEEEecCCCCCCHHhHcc-------------------------------------------CCCHHHHHHHHHHHHHHH
Q 025443          196 TPSLIFEYVNSTDFKVLYP-------------------------------------------TLTDYDIRYYIYELLKVM  232 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l~-------------------------------------------~l~~~~~~~i~~qi~~aL  232 (252)
                       +|||||||+||+|.+++.                                           .+++..++.++.||+.||
T Consensus       103 -~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  181 (345)
T 3hko_A          103 -ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL  181 (345)
T ss_dssp             -EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred             -EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence             999999999999999882                                           125778889999999999


Q ss_pred             HHHHHCCCeEEeee
Q 025443          233 SIFIRWSTVLCYQS  246 (252)
Q Consensus       233 ~yLH~~~IV~~~~~  246 (252)
                      +|||++||||++..
T Consensus       182 ~~LH~~~ivH~Dlk  195 (345)
T 3hko_A          182 HYLHNQGICHRDIK  195 (345)
T ss_dssp             HHHHHTTEECCCCC
T ss_pred             HHHHHCCccccCCC
Confidence            99999999998653

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.88  E-value=8.7e-22  Score=169.64  Aligned_cols=121  Identities=17%  Similarity=0.328  Sum_probs=107.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..++|++.+.||+|+||.||+|.+..+|+.||+|+++..      ..+.+.+|+.+++.++ |+||+++++++.+.+.  
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~--  106 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNE--  106 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTE--
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCc--
Confidence            357899999999999999999999999999999999742      2456889999999999 9999999999998865  


Q ss_pred             eEEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .++||||+++|+|.+++       ..+++..+..++.||+.||.|||++||||++..
T Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~  163 (310)
T 2wqm_A          107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIK  163 (310)
T ss_dssp             EEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCc
Confidence            99999999999999998       348999999999999999999999999998654

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=3.7e-22  Score=176.93  Aligned_cols=125  Identities=23%  Similarity=0.392  Sum_probs=104.3

Q ss_pred             ccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          120 QWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       120 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .|...++|++++.||+|+||.||+|.+..+|+.||||++...     ..+++.+|+++|+.++ |+||+++++++...+.
T Consensus        20 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~   98 (367)
T 1cm8_A           20 AWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDET   98 (367)
T ss_dssp             EECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSCSS
T ss_pred             eeeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCC-CcCCCCceeeEecCCc
Confidence            345578999999999999999999999999999999999542     1456889999999999 9999999999986532


Q ss_pred             ----ceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 ----KTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ----~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                          ..+||||||+ |++|.+++  +.+++..++.++.||+.||+|||++||||++..
T Consensus        99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlk  155 (367)
T 1cm8_A           99 LDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLK  155 (367)
T ss_dssp             TTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             cccCceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcC
Confidence                2379999999 78999999  679999999999999999999999999998653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.88  E-value=3.2e-22  Score=174.23  Aligned_cols=120  Identities=17%  Similarity=0.245  Sum_probs=108.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||||++... ..+.+.+|+.+++.+.+|+||+++++++.+.+.  .+||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~--~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKY--NAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTE--EEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCc--cEEEEE
Confidence            57899999999999999999999999999999999743 345688999999999449999999999998865  999999


Q ss_pred             CCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          203 YVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       203 ~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |+ ||+|.+++    +.+++..+..++.||+.||+|||++||||.+..
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlk  132 (330)
T 2izr_A           86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVK  132 (330)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            99 89999998    469999999999999999999999999998653

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.88  E-value=2.5e-22  Score=170.98  Aligned_cols=120  Identities=18%  Similarity=0.305  Sum_probs=110.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||+|.+..++..||+|++....  .+.+.+|+.+++.++ |+||+++++++.+.+.  +|+||
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~--~~~v~   88 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPP--FYIIT   88 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS--EEEEE
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCC--EEEEE
Confidence            678999999999999999999999999999999997543  567899999999999 9999999999988866  99999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||++||+|.+++     ..+++..+..++.||+.||.|||++||||++..
T Consensus        89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dik  138 (288)
T 3kfa_A           89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA  138 (288)
T ss_dssp             ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCS
T ss_pred             EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCC
Confidence            999999999999     348999999999999999999999999998653

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.87  E-value=4.7e-22  Score=185.67  Aligned_cols=119  Identities=18%  Similarity=0.196  Sum_probs=109.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++...      ....+.+|+.+|+.++ |+|||++++++.+.+.  +
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~--l  259 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDA--L  259 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE--E
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcC-CCCEeeEEEEEeeCCE--E
Confidence            57899999999999999999999999999999999642      2456889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++     ..+++..++.|+.||+.||+|||++||||.+.
T Consensus       260 ~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDL  312 (576)
T 2acx_A          260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDL  312 (576)
T ss_dssp             EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCC
Confidence            9999999999999998     23999999999999999999999999999864

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.87  E-value=5.6e-22  Score=171.28  Aligned_cols=120  Identities=16%  Similarity=0.207  Sum_probs=109.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....      .+.+.+|+.+++.++ |+||+++++++.+++.  +
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~--~  109 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQ-EPHVVPIHDFGEIDGQ--L  109 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTE--E
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcC-CCCeeEEEEEEeeCCe--E
Confidence            578999999999999999999999999999999996432      367889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |+||||++|++|.+++   +.+++..+..++.||+.||+|||++||+|++..
T Consensus       110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlk  161 (309)
T 2h34_A          110 YVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVK  161 (309)
T ss_dssp             EEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCC
Confidence            9999999999999999   569999999999999999999999999998643

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.87  E-value=6.5e-22  Score=171.20  Aligned_cols=120  Identities=26%  Similarity=0.490  Sum_probs=105.4

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      +..++|++++.||+|+||.||+|.+. +|+.||+|+++...     .+.+.+|+++++.++ |+||+++++++.+.+.  
T Consensus        18 ~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~--   93 (311)
T 3niz_A           18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELH-HPNIVSLIDVIHSERC--   93 (311)
T ss_dssp             CSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCC-CTTBCCEEEEECCSSC--
T ss_pred             chHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcC-CCCEeeeeeEEccCCE--
Confidence            45789999999999999999999994 58999999996432     356889999999999 9999999999998866  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +|||||||+ |+|.+++    ..+++..++.++.||+.||+|||++||||.+..
T Consensus        94 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dik  146 (311)
T 3niz_A           94 LTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK  146 (311)
T ss_dssp             EEEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCc
Confidence            999999998 5787777    349999999999999999999999999998653

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.87  E-value=5.7e-22  Score=170.95  Aligned_cols=121  Identities=22%  Similarity=0.318  Sum_probs=105.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      ..++|++.+.||+|+||.||+|.+..+|+.||+|++... ..+.+.+|+.+++.++ |+||+++++++.+.+.  +||||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~  103 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTD--LWIVM  103 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCC-CTTBCCEEEEEEETTE--EEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCE--EEEEe
Confidence            367899999999999999999999999999999999754 3577899999999999 9999999999998765  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||+++|+|.+++    ..+++..+..++.||+.||.|||++||||++..
T Consensus       104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~  152 (314)
T 3com_A          104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIK  152 (314)
T ss_dssp             ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcC
Confidence            999999999998    469999999999999999999999999998654

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.87  E-value=5.1e-22  Score=176.84  Aligned_cols=123  Identities=28%  Similarity=0.499  Sum_probs=102.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++...     ..+++.+|+.+|+.+.+|+||+++++++...+...+
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            357899999999999999999999999999999998542     245678999999999889999999999987664569


Q ss_pred             EEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||||+ |+|.+++  +.+++..+..++.||+.||+|||++||||++..
T Consensus        87 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlk  136 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMK  136 (388)
T ss_dssp             EEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCC
Confidence            99999998 6999988  679999999999999999999999999998653

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.87  E-value=6.4e-22  Score=178.98  Aligned_cols=124  Identities=25%  Similarity=0.373  Sum_probs=109.6

Q ss_pred             cCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC-
Q 025443          121 WGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS-  194 (252)
Q Consensus       121 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~-  194 (252)
                      +...++|++++.||+|+||.||+|.+..+++.||||+++..     ..+++.+|+++|+.++ |+||+++++++..... 
T Consensus        22 ~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~  100 (432)
T 3n9x_A           22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK-SDYIIRLYDLIIPDDLL  100 (432)
T ss_dssp             CCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTT
T ss_pred             ceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcC-CCCcceEEEEEecCCCC
Confidence            34568999999999999999999999999999999999652     2467889999999999 9999999999976631 


Q ss_pred             --ceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 --KTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 --~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        +.+||||||++ |+|.+++   ..+++..++.++.||+.||+|||++||||.+..
T Consensus       101 ~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlk  156 (432)
T 3n9x_A          101 KFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLK  156 (432)
T ss_dssp             TCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             cCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence              34899999997 6999999   459999999999999999999999999998653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.87  E-value=7.7e-22  Score=168.30  Aligned_cols=120  Identities=20%  Similarity=0.341  Sum_probs=110.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+..+++.||+|++...     ..+.+.+|+.++++++ |+||+++++++.+.+.  +|
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~   97 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSS--FY   97 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE--EE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcc-CCCccEEEEEEeCCCe--EE
Confidence            47899999999999999999999999999999999642     3567899999999998 9999999999998765  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||+++++|.+++   ..+++..+..++.||+.||.|||++||||++..
T Consensus        98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~  148 (287)
T 2wei_A           98 IVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLK  148 (287)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            999999999999988   679999999999999999999999999998653

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.87  E-value=3e-22  Score=184.26  Aligned_cols=120  Identities=18%  Similarity=0.312  Sum_probs=110.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||+|.+..++..||||+++..  ..+.+.+|+.+|++++ |+|||++++++.+...  +||||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~--~~lv~  295 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPP--FYIIT  295 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS--CEEEE
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcC-CCCEeeEEEEEecCCc--EEEEE
Confidence            46799999999999999999999988999999999754  3678999999999999 9999999999988866  99999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||+||+|.+++     ..+++..+..++.||+.||+|||++||||.+..
T Consensus       296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlk  345 (495)
T 1opk_A          296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLA  345 (495)
T ss_dssp             ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            999999999998     348999999999999999999999999998653

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.87  E-value=7.1e-22  Score=173.76  Aligned_cols=121  Identities=21%  Similarity=0.329  Sum_probs=108.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcC----CCCcceeeeeEEEcCCCce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLC----GGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~----~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..++|++++.||+|+||.||+|++..+++.||||+++...  .+.+..|+.+++.++    .|+||+++++++...+.  
T Consensus        33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~--  110 (360)
T 3llt_A           33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH--  110 (360)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE--
T ss_pred             ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe--
Confidence            3689999999999999999999999999999999997532  456788999999986    49999999999998865  


Q ss_pred             eEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||||+ |++|.+++     ..+++.+++.++.||+.||+|||++||||++..
T Consensus       111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  164 (360)
T 3llt_A          111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLK  164 (360)
T ss_dssp             EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence            99999999 89999998     249999999999999999999999999998654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.87  E-value=5.4e-22  Score=170.79  Aligned_cols=120  Identities=18%  Similarity=0.292  Sum_probs=107.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+.     .++..||+|+++...    .+.+.+|+.+++.++ |+||+++++++.+.+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HPHVIKLYGACSQDGP  100 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC-CCceeeEEEEEecCCc
Confidence            578999999999999999999984     455889999997532    467889999999999 9999999999988866


Q ss_pred             ceeEEEecCCCCCCHHhHc---cC------------------------CCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---PT------------------------LTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~~------------------------l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        +++||||++||+|.+++   ..                        +++.++..++.||+.||+|||++||||++..
T Consensus       101 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dik  177 (314)
T 2ivs_A          101 --LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLA  177 (314)
T ss_dssp             --CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             --eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccc
Confidence              99999999999999998   21                        8899999999999999999999999998653

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.87  E-value=7.2e-22  Score=167.40  Aligned_cols=122  Identities=21%  Similarity=0.289  Sum_probs=108.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+..+++.||+|++....     .+.+.+|+.+++.++ |+||+++++++.+...+.+|
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~   83 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLY   83 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEEGGGTEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcC-CCCCCeEEEEEecCCCceEE
Confidence            578999999999999999999999999999999997432     456889999999999 99999999988754435599


Q ss_pred             EEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCC-----CeEEeee
Q 025443          199 LIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWS-----TVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~-----IV~~~~~  246 (252)
                      +||||++||+|.+++       ..+++..+..++.||+.||+|||++|     |||++..
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~  143 (279)
T 2w5a_A           84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK  143 (279)
T ss_dssp             EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCS
T ss_pred             EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccc
Confidence            999999999999998       13999999999999999999999999     9998654

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.87  E-value=1.1e-21  Score=164.98  Aligned_cols=119  Identities=13%  Similarity=0.242  Sum_probs=108.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||+|.+. ++..||+|+++..  ..+.+.+|+++++.++ |+||+++++++.+.+.  .++||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~lv~   82 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAP--ICLVT   82 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS--CEEEE
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCC--eEEEE
Confidence            578999999999999999999985 6788999999754  3577899999999999 9999999999998866  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||++||+|.+++    ..+++..+..++.|++.||.|||++||+|++..
T Consensus        83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  131 (267)
T 3t9t_A           83 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA  131 (267)
T ss_dssp             CCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCC
T ss_pred             eCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCc
Confidence            999999999999    358999999999999999999999999998643

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.87  E-value=2e-22  Score=182.92  Aligned_cols=120  Identities=18%  Similarity=0.275  Sum_probs=102.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||.||+|.+..+|+.||||+++..      ....+.+|+.+++.++ |+||+++++++.+.+.  +
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~--~  223 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDR--L  223 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCS-CTTSCCEEEEEEETTE--E
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCC-CCeEeeEEEEEeeCCE--E
Confidence            57899999999999999999999999999999999743      2356788999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~~  246 (252)
                      |||||||+||+|.+++   +.+++..++.++.||+.||+|||+ +||||.+..
T Consensus       224 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlk  276 (446)
T 4ejn_A          224 CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLK  276 (446)
T ss_dssp             EEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             EEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCC
Confidence            9999999999999998   679999999999999999999998 999998653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.87  E-value=5.1e-22  Score=171.90  Aligned_cols=117  Identities=21%  Similarity=0.294  Sum_probs=106.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++.+.||+|+||.||+|.+  +|..||||++....     .+.+.+|++++++++ |+||+++++++.+.+.  ++
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~--~~  110 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR-HPNIVLFMGAVTQPPN--LS  110 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSTTC--CE
T ss_pred             hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCc--eE
Confidence            57899999999999999999987  68899999996532     356889999999999 9999999999998876  99


Q ss_pred             EEecCCCCCCHHhHcc------CCCHHHHHHHHHHHHHHHHHHHHCC--CeEEee
Q 025443          199 LIFEYVNSTDFKVLYP------TLTDYDIRYYIYELLKVMSIFIRWS--TVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l~------~l~~~~~~~i~~qi~~aL~yLH~~~--IV~~~~  245 (252)
                      ||||||+||+|.+++.      .+++..+..++.||+.||+|||++|  |||++.
T Consensus       111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Di  165 (309)
T 3p86_A          111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNL  165 (309)
T ss_dssp             EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTC
T ss_pred             EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCC
Confidence            9999999999999992      2999999999999999999999999  999854

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.87  E-value=7.5e-22  Score=170.42  Aligned_cols=122  Identities=13%  Similarity=0.168  Sum_probs=106.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcC--CCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQ--HSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~--~~~~~~  198 (252)
                      .++|++.+.||+|+||.||++.+..+++.||||++....   .+.+.+|+.+++.++ |+||+++++++...  .....|
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN-HPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEEEETTEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcC-CCCeeeEEEEEEeccCCCceeE
Confidence            578999999999999999999999999999999986432   567889999999999 99999999998732  223589


Q ss_pred             EEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||+++|+|.+++       ..+++.++..++.||+.||.|||++||||++..
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlk  161 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLK  161 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            999999999999988       348999999999999999999999999998654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.87  E-value=1.8e-21  Score=168.64  Aligned_cols=124  Identities=23%  Similarity=0.356  Sum_probs=110.6

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC----Cce
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH----SKT  196 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~----~~~  196 (252)
                      ..++|++++.||+|+||.||+|.+..+++.||||++...  ..+.+.+|+.+++++.+|+||+++++++....    ...
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~  101 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ  101 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence            468999999999999999999999999999999999753  35778999999999944999999999998742    245


Q ss_pred             eEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||||+++|+|.+++     ..+++..+..++.||+.||.|||++||||++..
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlk  156 (326)
T 2x7f_A          102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIK  156 (326)
T ss_dssp             EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCc
Confidence            99999999999999998     368999999999999999999999999998643

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.87  E-value=4e-22  Score=172.91  Aligned_cols=119  Identities=23%  Similarity=0.434  Sum_probs=93.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++++.||+|+||.||+|.+..+|+.||+|+++...    .+.+.+|+.+++.++ |+||+++++++.+++.  +||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~--~~l   80 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK-HENIVRLYDVIHTENK--LTL   80 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCC-BTTBCCEEEEECCTTE--EEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcC-CCCcceEEEEEEECCe--EEE
Confidence            568999999999999999999999999999999997432    467889999999999 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc---------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          200 IFEYVNSTDFKVLY---------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l---------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||+ |+|.+++         ..+++..++.++.||+.||+|||++||||++..
T Consensus        81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlk  135 (317)
T 2pmi_A           81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLK  135 (317)
T ss_dssp             EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence            999998 6999988         248999999999999999999999999998653

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.87  E-value=8.1e-22  Score=167.20  Aligned_cols=121  Identities=17%  Similarity=0.175  Sum_probs=107.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcC-----------
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQ-----------  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~-----------  192 (252)
                      ..+|++++.||+|+||.||+|.+..+++.||+|+++... +.+.+|+++++.++ |+||+++++++...           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~~~~~   87 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-EKAEREVKALAKLD-HVNIVHYNGCWDGFDYDPETSSKNS   87 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-GGGHHHHHHHHHCC-CTTBCCEEEEEEEEEEC--------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-HHHHHHHHHHHhCC-CCCEEEEeeeEeccccCcccccccc
Confidence            468999999999999999999999899999999997654 45779999999999 99999999988641           


Q ss_pred             ---CCceeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          193 ---HSKTPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       193 ---~~~~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                         ....++|||||+++|+|.+++     ..+++..+..++.||+.||.|||++||+|++..
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlk  149 (284)
T 2a19_B           88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLK  149 (284)
T ss_dssp             -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence               123489999999999999998     368999999999999999999999999998654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.87  E-value=9e-22  Score=182.86  Aligned_cols=119  Identities=18%  Similarity=0.221  Sum_probs=109.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|++..+|+.||||+++..      ..+.+.+|+.+|+.++ |+||+++++++.+...  +
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~--l  260 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVSLAYAFETKTD--L  260 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE--E
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcC-CCCEeeEEEEEeeCCE--E
Confidence            57899999999999999999999999999999999643      2456889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++       ..+++..++.|+.||+.||+|||++||||.+.
T Consensus       261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDL  315 (543)
T 3c4z_A          261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL  315 (543)
T ss_dssp             EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCC
Confidence            9999999999999988       14899999999999999999999999999864

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.87  E-value=9.1e-22  Score=171.33  Aligned_cols=121  Identities=22%  Similarity=0.317  Sum_probs=109.1

Q ss_pred             CCCeEEE-eEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVV-RKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|.+. +.||+|+||.||+|.+..+++.||+|+++..     ....+.+|+.+++.+..|+||+++++++.+.+.  +
T Consensus        27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~--~  104 (327)
T 3lm5_A           27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE--I  104 (327)
T ss_dssp             HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--E
T ss_pred             hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe--E
Confidence            4678887 8899999999999999999999999999753     256789999999999767999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||||+||+|.+++     ..+++.++..++.||+.||+|||++||||++..
T Consensus       105 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dik  158 (327)
T 3lm5_A          105 ILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLK  158 (327)
T ss_dssp             EEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCC
Confidence            9999999999999998     468999999999999999999999999998653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.87  E-value=2.8e-22  Score=178.15  Aligned_cols=120  Identities=18%  Similarity=0.258  Sum_probs=106.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc---CCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV---NTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++.+.||+|+||.||+|++.   .++..||||+++..    ..+.+.+|+.+|++++ |+||+++++++.+.+.  
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~--  120 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKP--  120 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS--
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCc--
Confidence            468999999999999999999986   46778999999753    2457899999999999 9999999999988866  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +|||||||+||+|.+++    ..+++.++..++.||+.||+|||++||||++..
T Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  174 (373)
T 2qol_A          121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA  174 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             eEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence            99999999999999999    369999999999999999999999999998653

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.87  E-value=9.5e-22  Score=173.06  Aligned_cols=121  Identities=14%  Similarity=0.202  Sum_probs=110.4

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ..++|++.+.||+|+||.||+|.+..++..||+|++....    .+.+.+|+.+++.++ |+||+++++++.+.+.  +|
T Consensus        31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~  107 (360)
T 3eqc_A           31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGE--IS  107 (360)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEETTE--EE
T ss_pred             ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCC-CCCEEEEeEEEEECCE--EE
Confidence            3578999999999999999999999999999999997542    457889999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHC-CCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRW-STVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~-~IV~~~~~  246 (252)
                      |||||++||+|.+++   +.+++..+..++.||+.||.|||++ ||||++..
T Consensus       108 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlk  159 (360)
T 3eqc_A          108 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK  159 (360)
T ss_dssp             EEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCS
T ss_pred             EEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCcc
Confidence            999999999999999   5799999999999999999999996 99998653

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.87  E-value=6.3e-22  Score=169.04  Aligned_cols=122  Identities=17%  Similarity=0.218  Sum_probs=108.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC--------
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH--------  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~--------  193 (252)
                      .++|++++.||+|+||.||+|.+..+++.||||+++..  ..+.+.+|+.+++.++ |+||+++++++.+..        
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN-HQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcC-chHHHHHHHHHHhhcchhhhhcc
Confidence            46799999999999999999999999999999999653  2467889999999999 999999999886531        


Q ss_pred             ---CceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          194 ---SKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       194 ---~~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                         ...+|+||||++||+|.+++    ..+++..+..++.||+.||+|||++||||++..
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlk  143 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLK  143 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCC
Confidence               24589999999999999999    357889999999999999999999999998653

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.87  E-value=5.1e-22  Score=172.73  Aligned_cols=118  Identities=24%  Similarity=0.453  Sum_probs=104.9

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccch----HHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK----KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~----~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ++|++++.||+|+||.||+|.+..+++.||+|+++....    ..+.+|+.+++.++ |+||+++++++.+.+.  +|||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~lv   78 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKS--LTLV   78 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCC-CTTBCCEEEEEECSSC--EEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcC-CCCCCeeeeEEeeCCE--EEEE
Confidence            679999999999999999999999999999999975432    24558999999999 9999999999998876  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||++ |+|.+++    ..+++..++.++.||+.||.|||++||||++..
T Consensus        79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dik  127 (324)
T 3mtl_A           79 FEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK  127 (324)
T ss_dssp             EECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCC
T ss_pred             ecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcC
Confidence            99998 6888888    458999999999999999999999999998653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.87  E-value=4.5e-22  Score=167.46  Aligned_cols=119  Identities=13%  Similarity=0.231  Sum_probs=106.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++.+.||+|+||.||+|.+  ++..||+|+++...     .+.+.+|+.+++.++ |+||+++++++.+...+.++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~   85 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS-HPNVLPVLGACQSPPAPHPT   85 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCS-CTTEECEEEEECTTTSSSCE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcC-CCchhheEEEEccCCCCCeE
Confidence            57899999999999999999998  48899999997532     456899999999999 99999999999887434489


Q ss_pred             EEecCCCCCCHHhHc---c--CCCHHHHHHHHHHHHHHHHHHHHCC--CeEEee
Q 025443          199 LIFEYVNSTDFKVLY---P--TLTDYDIRYYIYELLKVMSIFIRWS--TVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~--~l~~~~~~~i~~qi~~aL~yLH~~~--IV~~~~  245 (252)
                      +||||++||+|.+++   .  .+++.++..++.||+.||.|||++|  |+|.+.
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~di  139 (271)
T 3kmu_A           86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHAL  139 (271)
T ss_dssp             EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCC
T ss_pred             eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCC
Confidence            999999999999999   2  4899999999999999999999999  988754

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.87  E-value=2.7e-22  Score=175.64  Aligned_cols=120  Identities=23%  Similarity=0.347  Sum_probs=108.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      .++|++.+.||+|+||.||+|++..+++.||||+++...           .+.+.+|+.+|+.++ |+||+++++++.+.
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCC-CTTBCCEEEEEECS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCC-CCCEeeEEEEEeeC
Confidence            468999999999999999999999999999999997532           345778999999999 99999999999988


Q ss_pred             CCceeEEEecCCCCC-CHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          193 HSKTPSLIFEYVNST-DFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg-~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +.  ++|||||+.+| +|.+++   ..+++..+..++.||+.||+|||++||||++..
T Consensus       102 ~~--~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlk  157 (335)
T 3dls_A          102 GF--FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIK  157 (335)
T ss_dssp             SE--EEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             CE--EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccC
Confidence            65  99999999766 999998   479999999999999999999999999998643

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.87  E-value=1.5e-21  Score=167.90  Aligned_cols=121  Identities=21%  Similarity=0.302  Sum_probs=107.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEE-----cCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGIN-----VNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+     ..++..||+|+++...    .+.+.+|+.+++++.+|+||+++++++.+.+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            57899999999999999999985     4567899999997543    46788999999999339999999999998876


Q ss_pred             ceeEEEecCCCCCCHHhHc--c-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY--P-------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l--~-------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        .+|||||+++|+|.+++  .                   .+++.++..++.||+.||.|||++||||++..
T Consensus       102 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  172 (313)
T 1t46_A          102 --TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA  172 (313)
T ss_dssp             --CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             --cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence              99999999999999998  1                   38999999999999999999999999998653

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=5.9e-22  Score=174.68  Aligned_cols=121  Identities=18%  Similarity=0.383  Sum_probs=108.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc---CCCcEEEEEEeecc-------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV---NTNERCIIKILKPV-------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~-------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~  193 (252)
                      .++|++++.||+|+||.||+|++.   .+++.||||+++..       ..+.+.+|+.+|+.+++|+||+++++++.+.+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            578999999999999999999984   58999999998642       24567889999999954999999999999886


Q ss_pred             CceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          194 SKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       194 ~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .  +|||||||+||+|.+++   ..+++..+..++.||+.||.|||++||||++..
T Consensus       133 ~--~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlk  186 (355)
T 1vzo_A          133 K--LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIK  186 (355)
T ss_dssp             E--EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             e--EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            5  99999999999999999   679999999999999999999999999998654

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.86  E-value=2e-21  Score=169.40  Aligned_cols=121  Identities=17%  Similarity=0.267  Sum_probs=105.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-------CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-------NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      .++|++.+.||+|+||.||+|.+.       .++..||+|+++...    .+.+.+|+.+++.+.+|+||+++++++.+.
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            578999999999999999999985       356789999997532    456889999999993399999999999888


Q ss_pred             CCceeEEEecCCCCCCHHhHcc-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLYP-------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l~-------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +.  +||||||++||+|.+++.                   .+++.++..++.||+.||+|||++||||++..
T Consensus       114 ~~--~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  184 (334)
T 2pvf_A          114 GP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA  184 (334)
T ss_dssp             SC--CEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             Cc--eEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCc
Confidence            66  999999999999999981                   28899999999999999999999999998653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.86  E-value=1.3e-21  Score=173.48  Aligned_cols=129  Identities=24%  Similarity=0.373  Sum_probs=112.3

Q ss_pred             CcccccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEE
Q 025443          116 SLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVR  190 (252)
Q Consensus       116 ~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~  190 (252)
                      .....|...++|.+.+.||+|+||.||+|.+..+|+.||||++....     .+.+.+|+.+++.++ |+||+++++++.
T Consensus        33 ~~~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~  111 (371)
T 4exu_A           33 VNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFT  111 (371)
T ss_dssp             ETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEEC
T ss_pred             eccceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcC-CCCchhhhhhee
Confidence            33445566789999999999999999999999999999999997532     467889999999999 999999999998


Q ss_pred             cCCCc----eeEEEecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          191 DQHSK----TPSLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       191 ~~~~~----~~~lV~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ..+..    .+|+||||++ |+|.+++ ..+++..+..++.||+.||+|||++||||++..
T Consensus       112 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  171 (371)
T 4exu_A          112 PASSLRNFYDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLK  171 (371)
T ss_dssp             SCSSSTTCCCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             ccCCcccceeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcC
Confidence            76541    2399999998 7999888 679999999999999999999999999998654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.86  E-value=1.6e-21  Score=169.52  Aligned_cols=122  Identities=20%  Similarity=0.267  Sum_probs=106.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEE----cCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGIN----VNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~----~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++++.||+|+||.||+|.+    ..+++.||+|++....   .+.+.+|+++++.++ |+||+++++++...+...
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~  118 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRRN  118 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCC-CTTBCCEEEEECC----C
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEecCCCc
Confidence            57899999999999999999984    5689999999997543   457889999999999 999999999987765345


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ++|||||+++|+|.+++    ..+++.++..++.||+.||+|||++||||++..
T Consensus       119 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dik  172 (326)
T 2w1i_A          119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA  172 (326)
T ss_dssp             CEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             eEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCC
Confidence            89999999999999999    358999999999999999999999999998654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.86  E-value=2.7e-21  Score=163.97  Aligned_cols=118  Identities=17%  Similarity=0.268  Sum_probs=105.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++++.||+|+||.||+|.+. ++..||+|+++..  ..+.+.+|+++++.++ |+||+++++++.++ .  .++||
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~-~--~~~v~   86 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQE-P--IYIIT   86 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCC-CTTBCCEEEEECSS-S--CEEEE
T ss_pred             HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCC-CcCcceEEEEEcCC-C--cEEEE
Confidence            578999999999999999999974 6778999999754  3677899999999999 99999999998654 3  89999


Q ss_pred             cCCCCCCHHhHcc-----CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLYP-----TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l~-----~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||++||+|.+++.     .+++..+..++.||+.||+|||++||+|++..
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dik  136 (279)
T 1qpc_A           87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR  136 (279)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            9999999999992     69999999999999999999999999998654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.86  E-value=2.1e-21  Score=171.88  Aligned_cols=120  Identities=21%  Similarity=0.325  Sum_probs=108.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      .++|++.+.||+|+||.||+|.+..+|+.||||+++...           .+.+.+|+.+++.+.+|+||+++++++...
T Consensus        93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  172 (365)
T 2y7j_A           93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS  172 (365)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred             hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence            367999999999999999999999899999999997532           356789999999994499999999999987


Q ss_pred             CCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ..  .||||||++||+|.+++   ..+++..+..++.||+.||.|||++||+|.+.
T Consensus       173 ~~--~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dl  226 (365)
T 2y7j_A          173 SF--MFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDL  226 (365)
T ss_dssp             SE--EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             CE--EEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            65  99999999999999998   57999999999999999999999999999864

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.86  E-value=1.9e-21  Score=173.03  Aligned_cols=121  Identities=15%  Similarity=0.268  Sum_probs=106.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC-------CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT-------NERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~-------~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      .++|++.+.||+|+||.||+|++..+       +..||+|+++...    .+.+.+|+++++.+.+|+|||++++++.+.
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            57899999999999999999998543       3579999997542    356889999999993399999999999988


Q ss_pred             CCceeEEEecCCCCCCHHhHc--c-----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLY--P-----------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l--~-----------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +.  +|||||||+||+|.+++  .                 .+++.++..|+.||+.||+|||++||||++..
T Consensus       148 ~~--~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  218 (382)
T 3tt0_A          148 GP--LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA  218 (382)
T ss_dssp             SS--CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             Cc--eEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            76  99999999999999998  1                 28999999999999999999999999998653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.86  E-value=1e-21  Score=174.14  Aligned_cols=123  Identities=16%  Similarity=0.260  Sum_probs=108.3

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC--
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS--  194 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~--  194 (252)
                      ...++|++++.||+|+||.||+|.+..+++.||||++...     ..+.+.+|+.+++.++ |+||+++++++...+.  
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~  100 (371)
T 2xrw_A           22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSLE  100 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSCCSTT
T ss_pred             chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcC-CCCccceEEeeccccccc
Confidence            3468999999999999999999999999999999999752     2456889999999999 9999999999986541  


Q ss_pred             --ceeEEEecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 --KTPSLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 --~~~~lV~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        ..+|||||||+ |+|.+++ ..+++..+..++.||+.||+|||++||||++..
T Consensus       101 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlk  154 (371)
T 2xrw_A          101 EFQDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK  154 (371)
T ss_dssp             TCCEEEEEEECCS-EEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             cccceEEEEEcCC-CCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence              25899999998 5788877 779999999999999999999999999998653

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.86  E-value=1.4e-21  Score=166.46  Aligned_cols=119  Identities=20%  Similarity=0.285  Sum_probs=106.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----------hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----------KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++....          .+.+.+|+.+++.++ |+||+++++++.+.
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~   95 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNIVKLYGLMHNP   95 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCC-CTTBCCEEEEETTT
T ss_pred             hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCC-CCCchhhheeecCC
Confidence            3688999999999999999999999999999999995422          267899999999999 99999999998654


Q ss_pred             CCceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCC--CeEEeee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWS--TVLCYQS  246 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~--IV~~~~~  246 (252)
                          .+|||||+++|+|.+++    ..+++..+..++.|++.||+|||++|  |||++..
T Consensus        96 ----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dik  151 (287)
T 4f0f_A           96 ----PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLR  151 (287)
T ss_dssp             ----TEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCS
T ss_pred             ----CeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCC
Confidence                47999999999998888    46999999999999999999999999  9998653

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.86  E-value=2.1e-21  Score=165.84  Aligned_cols=120  Identities=17%  Similarity=0.262  Sum_probs=109.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||||++... ..+.+.+|+.+++.+.+|+||+++++++.+...  .+||||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~--~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH--NVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE--EEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCce--eEEEEE
Confidence            57899999999999999999999999999999999753 345688999999999659999999999988865  999999


Q ss_pred             CCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          203 YVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       203 ~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |+ ||+|.+++    ..+++.++..++.||+.||+|||++||||++..
T Consensus        87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlk  133 (298)
T 1csn_A           87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIK  133 (298)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred             ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            99 89999999    359999999999999999999999999998654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=1.5e-21  Score=170.49  Aligned_cols=120  Identities=23%  Similarity=0.317  Sum_probs=105.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+.     .++..||+|+++..    ..+.+.+|+.+++.+.+|+||+++++++.+.+.
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  123 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  123 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence            578999999999999999999973     35678999999643    246789999999999339999999999998866


Q ss_pred             ceeEEEecCCCCCCHHhHcc--------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP--------------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~--------------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        +||||||++||+|.+++.                          .+++.++..++.||+.||+|||++||||++.
T Consensus       124 --~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Di  198 (344)
T 1rjb_A          124 --IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  198 (344)
T ss_dssp             --CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             --cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence              999999999999999991                          1789999999999999999999999999864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.86  E-value=1.8e-21  Score=168.73  Aligned_cols=120  Identities=18%  Similarity=0.232  Sum_probs=105.7

Q ss_pred             CeEEEeEeeecCceEEEEEEE----cCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          126 DYEVVRKVGRGKYSEVFEGIN----VNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~----~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .|++++.||+|+||.||++.+    ..+++.||||+++...    .+.+.+|+++++.++ |+||+++++++.+.+...+
T Consensus        32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~  110 (318)
T 3lxp_A           32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDAGAASL  110 (318)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTTTEE
T ss_pred             HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCC-CcchhhEEEEEecCCCceE
Confidence            359999999999999988764    3478999999997543    456899999999999 9999999999998655669


Q ss_pred             EEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +|||||+++|+|.+++  ..+++..+..++.||+.||+|||++||||++..
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dik  161 (318)
T 3lxp_A          111 QLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLA  161 (318)
T ss_dssp             EEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCc
Confidence            9999999999999999  569999999999999999999999999998654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.86  E-value=2.7e-21  Score=170.18  Aligned_cols=119  Identities=19%  Similarity=0.279  Sum_probs=106.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|+.++.||+|+||.||+|.+..+++.||||++....      .+.+.+|+++++.++ |+||+++++++.+.+.  .
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~--~  129 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHT--A  129 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTE--E
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCe--E
Confidence            356999999999999999999999999999999996432      356889999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||||. |+|.+++    ..+++.++..++.||+.||+|||++||||++..
T Consensus       130 ~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  181 (348)
T 1u5q_A          130 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK  181 (348)
T ss_dssp             EEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCS
T ss_pred             EEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence            99999998 6787777    579999999999999999999999999998654

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.86  E-value=2.2e-21  Score=163.70  Aligned_cols=117  Identities=11%  Similarity=0.223  Sum_probs=103.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++.+.||+|+||.||+|.+  ++..||+|+++..       ..+.+.+|+++++.++ |+||+++++++.+.+.  
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--   80 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPNIIALRGVCLKEPN--   80 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCC-CTTBCCEEEEECCC----
T ss_pred             hhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcC-CCCEeeEEEEEecCCc--
Confidence            57899999999999999999998  5889999998642       2467889999999999 9999999999998866  


Q ss_pred             eEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCC---CeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWS---TVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~---IV~~~~  245 (252)
                      .|+||||++||+|.+++  +.+++..+..++.|++.||+|||++|   |+|++.
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~di  134 (271)
T 3dtc_A           81 LCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDL  134 (271)
T ss_dssp             CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCC
T ss_pred             eEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCC
Confidence            99999999999999999  67999999999999999999999999   778754

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.86  E-value=7.1e-22  Score=171.67  Aligned_cols=120  Identities=11%  Similarity=0.093  Sum_probs=105.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC--ceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS--KTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~--~~~~l  199 (252)
                      .++|++.+.||+|+||.||+|.+  .++.||||+++...  .....+|+.++++++ |+|||++++++.+...  ..+||
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMK-HENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEE--CCCEEEEEEeecCchHHHHHHHHHHHHhcCC-CCCchhhcceeccCCCCCceEEE
Confidence            57899999999999999999988  48999999997544  334567899999999 9999999999987542  34799


Q ss_pred             EecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHC----------CCeEEeee
Q 025443          200 IFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRW----------STVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~----------~IV~~~~~  246 (252)
                      |||||++|+|.+++  +.+++..+..++.||+.||+|||++          ||||++..
T Consensus       100 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlk  158 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK  158 (322)
T ss_dssp             EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCS
T ss_pred             EEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCC
Confidence            99999999999999  6799999999999999999999999          99998643

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.86  E-value=2.4e-21  Score=167.58  Aligned_cols=120  Identities=15%  Similarity=0.173  Sum_probs=103.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|+++++||+|+||+||+|.+..+|+.||||++....     ......|+..+..+..|+||+++++++.+.+.  +|
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~--~~  133 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI--LY  133 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EE
T ss_pred             hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCE--EE
Confidence            367999999999999999999999999999999986421     33455677777666349999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||| +|+|.+++    ..+++..+..++.||+.||+|||++||||++..
T Consensus       134 lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  184 (311)
T 3p1a_A          134 LQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVK  184 (311)
T ss_dssp             EEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence            999999 57898888    469999999999999999999999999998653

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.86  E-value=2.6e-21  Score=165.11  Aligned_cols=122  Identities=20%  Similarity=0.297  Sum_probs=108.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcC--CCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQ--HSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~--~~~~  196 (252)
                      ...|++.+.||+|+||.||+|.+..++..||+|++....     .+.+.+|+.+++.++ |+||+++++++...  +...
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~  103 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCEE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCC-CCCeeeeeeeeccccCCCce
Confidence            456899999999999999999999999999999996432     456889999999999 99999999998753  2245


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCC--CeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWS--TVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~--IV~~~~~  246 (252)
                      +||||||+++|+|.+++   ..+++..+..++.||+.||.|||++|  |+|++..
T Consensus       104 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dik  158 (290)
T 1t4h_A          104 IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK  158 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCC
T ss_pred             EEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCC
Confidence            89999999999999999   67999999999999999999999999  9998654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.86  E-value=2.7e-21  Score=166.14  Aligned_cols=121  Identities=17%  Similarity=0.284  Sum_probs=105.1

Q ss_pred             CCCeEEE-eEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEc--CCCceeEEE
Q 025443          124 QDDYEVV-RKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRD--QHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~--~~~~~~~lV  200 (252)
                      .++|.+. +.||+|+||.||+|.+..+++.||+|+++.  ...+.+|+.++.++.+|+||+++++++..  .+.+.+|||
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv   93 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV   93 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc--cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence            5778887 779999999999999999999999999964  35677999998555449999999999976  222459999


Q ss_pred             ecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||+||+|.+++     ..+++..+..++.||+.||.|||++||||++..
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlk  144 (299)
T 3m2w_A           94 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK  144 (299)
T ss_dssp             ECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            9999999999999     259999999999999999999999999998653

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.86  E-value=3e-21  Score=175.51  Aligned_cols=119  Identities=14%  Similarity=0.253  Sum_probs=106.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .++|++.+.||+|+||.||+|.+  .++.||||+++.. ..+.+.+|+.+|++++ |+|||++++++.+.. ..+|||||
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~-~~~~iv~e  267 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEK-GGLYIVTE  267 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCTTSHHHHHHHHHHHTCC-CTTBCCEEEEEECTT-SCEEEEEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCchHHHHHHHHHHHHHhcc-CCCEEEEEEEEEcCC-CceEEEEE
Confidence            57899999999999999999998  4789999999764 3577899999999999 999999999987764 23999999


Q ss_pred             CCCCCCHHhHc---c--CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          203 YVNSTDFKVLY---P--TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       203 ~~~gg~L~~~l---~--~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||++|+|.+++   +  .+++..+..++.||+.||+|||++||||.+..
T Consensus       268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlk  316 (450)
T 1k9a_A          268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLA  316 (450)
T ss_dssp             CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence            99999999999   2  37999999999999999999999999998653

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.86  E-value=3.5e-22  Score=170.96  Aligned_cols=120  Identities=17%  Similarity=0.229  Sum_probs=94.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||||++...    ..+.+.+|+.+++.++ |+||+++++++...+.  .++
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~l   90 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH-HPNIVSYYTSFVVKDE--LWL   90 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCC-CTTBCCEEEEEESSSC--EEE
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcC-CCCEeeEEEEEeecCC--cEE
Confidence            57899999999999999999999889999999998643    2456889999999999 9999999999999876  999


Q ss_pred             EecCCCCCCHHhHcc-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          200 IFEYVNSTDFKVLYP-----------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l~-----------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||++||+|.+++.           .+++..+..++.||+.||.|||++||+|++..
T Consensus        91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~  148 (303)
T 2vwi_A           91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVK  148 (303)
T ss_dssp             EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999982           38999999999999999999999999998654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=2.6e-21  Score=168.99  Aligned_cols=120  Identities=15%  Similarity=0.222  Sum_probs=106.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC----cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN----ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~----~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++.+.||+|+||.||+|.+..++    ..||+|+++...    ...+.+|+.+++.++ |+||+++++++.+.+. 
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~-  120 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS-HHNIIRLEGVISKYKP-  120 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS-
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEecCCC-
Confidence            578999999999999999999986553    459999997532    456889999999999 9999999999988766 


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                       ++|||||++||+|.+++    ..+++.++..++.||+.||+|||++||||++..
T Consensus       121 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  174 (333)
T 1mqb_A          121 -MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLA  174 (333)
T ss_dssp             -EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             -cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence             99999999999999998    459999999999999999999999999998654

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.86  E-value=1.6e-21  Score=169.49  Aligned_cols=120  Identities=17%  Similarity=0.249  Sum_probs=103.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEE-----EcCCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGI-----NVNTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~-----~~~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||.||+|.     +..++..||||++...    ....+.+|+.+++.++ |+||+++++++.+.+.
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCC-CCCCCeEEEEEcCCCC
Confidence            5789999999999999999999     5567889999999643    2456889999999998 9999999999998866


Q ss_pred             ceeEEEecCCCCCCHHhHc--c--------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY--P--------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l--~--------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        .||||||++||+|.+++  .        .+++.++..++.||+.||.|||++||||++..
T Consensus       108 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlk  167 (327)
T 2yfx_A          108 --RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA  167 (327)
T ss_dssp             --CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             --cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCC
Confidence              99999999999999999  1        28999999999999999999999999998653

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.86  E-value=2e-21  Score=167.33  Aligned_cols=123  Identities=23%  Similarity=0.348  Sum_probs=103.3

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcC------
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQ------  192 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~------  192 (252)
                      ...++|++++.||+|+||.||+|.+..+++.||+|++....   .+.+.+|+++++.++ |+||+++++++...      
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~   86 (320)
T 2i6l_A            8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLD-HDNIVKVFEILGPSGSQLTD   86 (320)
T ss_dssp             EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECTTSCBCCC
T ss_pred             ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcC-CCCeeEEEEecccccccccc
Confidence            34689999999999999999999999999999999997543   467889999999999 99999999988532      


Q ss_pred             ------CCceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          193 ------HSKTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       193 ------~~~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                            ....+||||||++ |+|.+++  +.+++..++.++.||+.||+|||++||||++..
T Consensus        87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  147 (320)
T 2i6l_A           87 DVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLK  147 (320)
T ss_dssp             ----CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCS
T ss_pred             ccccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence                  1245899999998 6999998  579999999999999999999999999998653

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.86  E-value=2.8e-21  Score=165.35  Aligned_cols=119  Identities=26%  Similarity=0.454  Sum_probs=106.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+..+|+.||||+++...     .+.+.+|+.++++++ |+||+++++++.+.+.  +|
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~--~~   78 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENK--LY   78 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCC-CTTBCCEEEEEEETTE--EE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcC-CCCeeeEEEEEecCCc--eE
Confidence            578999999999999999999999999999999986432     367889999999999 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||++ |+|.+++     ..+++..+..++.||+.||+|||++||||++..
T Consensus        79 lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  130 (299)
T 2r3i_A           79 LVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLK  130 (299)
T ss_dssp             EEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCC
Confidence            9999998 6999988     358999999999999999999999999998654

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.86  E-value=1.4e-21  Score=167.72  Aligned_cols=121  Identities=21%  Similarity=0.328  Sum_probs=104.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||+|+++..       ..+.+.+|+.+++.++ |+||+++++++...+.+.
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-HKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECC---C
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcC-CCCeeEEEEEEEcCCCCe
Confidence            57899999999999999999999999999999999643       2467899999999999 999999999996544345


Q ss_pred             eEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||||+++| |.+++     ..+++..+..++.||+.||.|||++||||++..
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlk  136 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIK  136 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            99999999976 66666     469999999999999999999999999998654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.86  E-value=2e-21  Score=165.22  Aligned_cols=119  Identities=19%  Similarity=0.335  Sum_probs=104.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC---CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT---NERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++.+.||+|+||.||+|.+..+   +..||+|+++...    .+.+.+|+.+++.++ |+||+++++++.++ .  
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~-~--   89 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-P--   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSS-S--
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCccceEEEEEccC-c--
Confidence            57899999999999999999998654   4579999986532    456889999999999 99999999998543 3  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .|+||||+++|+|.+++    ..+++..+..++.||+.||+|||++||||++..
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  143 (281)
T 1mp8_A           90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA  143 (281)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             cEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence            89999999999999999    258999999999999999999999999998653

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.86  E-value=2.3e-21  Score=165.84  Aligned_cols=121  Identities=18%  Similarity=0.210  Sum_probs=107.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHh--cCCCCcceeeeeEEEcCC--CceeE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQN--LCGGPNVVKLLDIVRDQH--SKTPS  198 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~--l~~h~nIv~l~~~~~~~~--~~~~~  198 (252)
                      ..++|++++.||+|+||.||+|.+  +++.||||++.......+.+|.+++..  ++ |+||+++++++.+..  ...+|
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~-h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLR-HENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHHTCCC-CTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccccchhhHHHHHHHHHhhcc-CcCeeeEEEeeccccCCCceeE
Confidence            367899999999999999999988  789999999988777778888888887  77 999999999876432  24589


Q ss_pred             EEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHH--------HCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFI--------RWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH--------~~~IV~~~~~  246 (252)
                      |||||+++|+|.+++  ..+++..+..++.||+.||+|||        ++||||++..
T Consensus        83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk  140 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK  140 (301)
T ss_dssp             EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCC
T ss_pred             EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCC
Confidence            999999999999999  57999999999999999999999        9999998653

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.86  E-value=4.1e-21  Score=169.56  Aligned_cols=123  Identities=23%  Similarity=0.357  Sum_probs=108.8

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCC---C
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQH---S  194 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~---~  194 (252)
                      ...++|++++.||+|+||.||+|.+..++..||||++....    .+.+.+|+++|+.++ |+||+++++++....   .
T Consensus        24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~  102 (364)
T 3qyz_A           24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQM  102 (364)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTTTC
T ss_pred             cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcC-CCCCccceeEEecCCcccc
Confidence            33578999999999999999999999999999999997432    366889999999999 999999999997653   1


Q ss_pred             ceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ..+||||||++ |+|.+++  +.+++.+++.++.||+.||+|||++||||++..
T Consensus       103 ~~~~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  155 (364)
T 3qyz_A          103 KDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLK  155 (364)
T ss_dssp             CCEEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             ceEEEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            34899999998 6999988  679999999999999999999999999998654

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.86  E-value=7.5e-22  Score=171.11  Aligned_cols=120  Identities=13%  Similarity=0.242  Sum_probs=107.8

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ..++|++.+.||+|+||.||+|.+ .+++.||||++....   .+.+.+|+.+++.++ |+||+++++++.+.+.  .++
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~--~~l  112 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCR-HPHLVSLIGFCDERNE--MIL  112 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCC-CTTBCCEEEECCCTTC--CEE
T ss_pred             HHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCe--EEE
Confidence            367899999999999999999997 578999999986533   567899999999999 9999999999988766  999


Q ss_pred             EecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          200 IFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||++||+|.+++       ..+++.++..++.||+.||+|||++||||++..
T Consensus       113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlk  166 (321)
T 2qkw_B          113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVK  166 (321)
T ss_dssp             EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCC
Confidence            99999999999998       148999999999999999999999999998653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.86  E-value=2.2e-21  Score=168.06  Aligned_cols=122  Identities=16%  Similarity=0.305  Sum_probs=99.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc---EEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE---RCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++.+.||+|+||.||+|.+..++.   .||||+++..     ..+.+.+|+++++.++ |+||+++++++.+....
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~  100 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD-HPHVAKLVGVSLRSRAK  100 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCC-CTTBCCCCEEEECC---
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCC-CCceehhhceeeccccc
Confidence            5789999999999999999999877765   8999999643     2567899999999998 99999999999876541


Q ss_pred             ----eeEEEecCCCCCCHHhHc---c------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 ----TPSLIFEYVNSTDFKVLY---P------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ----~~~lV~E~~~gg~L~~~l---~------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                          ..++||||+++|+|.+++   .      .+++.++..++.||+.||+|||++||||++..
T Consensus       101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dik  164 (323)
T 3qup_A          101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLA  164 (323)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCC
Confidence                139999999999999998   1      59999999999999999999999999998653

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.86  E-value=2.6e-21  Score=168.10  Aligned_cols=121  Identities=17%  Similarity=0.261  Sum_probs=107.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEE--EEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERC--IIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~v--AvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.+..++..+  |+|.++..    ..+.+.+|+++++++.+|+||+++++++.+.+.  +
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--~  101 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY--L  101 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE--E
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCc--e
Confidence            578999999999999999999998888865  99998642    245688999999999339999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---c----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---P----------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~----------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||+++|+|.+++   .                .+++.++..++.||+.||+|||++||||++..
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlk  169 (327)
T 1fvr_A          102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLA  169 (327)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCc
Confidence            9999999999999998   1                48999999999999999999999999998653

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.86  E-value=4.1e-21  Score=166.15  Aligned_cols=120  Identities=18%  Similarity=0.287  Sum_probs=106.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+.     .++..||+|++....    ...+.+|+.+++.++ |+||+++++++.+.+.
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~  102 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVVRLLGVVSQGQP  102 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCC-CTTBCCEEEEECSSSS
T ss_pred             hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcC-CCCEeeeEEEEccCCc
Confidence            578999999999999999999986     357889999997532    346889999999999 9999999999988866


Q ss_pred             ceeEEEecCCCCCCHHhHc-------------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY-------------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l-------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        .+|||||++||+|.+++             ..+++..+..++.||+.||.|||++||+|++..
T Consensus       103 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dik  165 (322)
T 1p4o_A          103 --TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLA  165 (322)
T ss_dssp             --CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCS
T ss_pred             --cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCc
Confidence              99999999999999998             135899999999999999999999999998653

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.86  E-value=4.3e-21  Score=166.87  Aligned_cols=121  Identities=19%  Similarity=0.299  Sum_probs=107.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc-----EEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE-----RCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+..++.     .||+|.++...    .+.+.+|+.+++.+.+|+||+++++++.+.+.
T Consensus        45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  124 (333)
T 2i1m_A           45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP  124 (333)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence            5789999999999999999999976654     79999997542    46688999999999339999999999988866


Q ss_pred             ceeEEEecCCCCCCHHhHcc-----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP-----------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~-----------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        +||||||+++|+|.+++.                 .+++..+..++.||+.||+|||++||||++..
T Consensus       125 --~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  191 (333)
T 2i1m_A          125 --VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVA  191 (333)
T ss_dssp             --CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             --eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcc
Confidence              999999999999999981                 37999999999999999999999999998653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.86  E-value=3.5e-21  Score=167.61  Aligned_cols=120  Identities=18%  Similarity=0.271  Sum_probs=102.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcE----EEEEEeec----cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNER----CIIKILKP----VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~----vAvK~i~~----~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      ..++|++.+.||+|+||.||+|.+..++..    ||+|.++.    ...+.+.+|+.++++++ |+||+++++++.+.. 
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~-   90 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-   90 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCC-BTTBCCEEEEEESSS-
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCC-
Confidence            357899999999999999999999877765    58887753    23567899999999999 999999999998764 


Q ss_pred             ceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        .++||||+.+|+|.+++    ..+++..+..|+.||+.||+|||++||||++..
T Consensus        91 --~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dik  144 (327)
T 3poz_A           91 --VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA  144 (327)
T ss_dssp             --EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             --eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCC
Confidence              78999999999999998    469999999999999999999999999998654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.86  E-value=1.9e-21  Score=172.91  Aligned_cols=120  Identities=21%  Similarity=0.346  Sum_probs=102.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCC----------
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQH----------  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~----------  193 (252)
                      .++|++++.||+|+||.||+|.+..+|+.||||++.... ....+|+.+|+.++ |+|||++++++...+          
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~~~   83 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-RYKNRELDIMKVLD-HVNIIKLVDYFYTTGDEEPKPPQPP   83 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-TSCCHHHHHHTTCC-CTTBCCEEEEEEEC-----------
T ss_pred             cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-chHHHHHHHHHHcC-CCCccchhheeeecCcccccccccc
Confidence            578999999999999999999999999999999996542 33458999999999 999999999985432          


Q ss_pred             --------------------------CceeEEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          194 --------------------------SKTPSLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       194 --------------------------~~~~~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                                                ...++||||||+ |+|.+.+       ..+++..++.++.||+.||+|||++||
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  162 (383)
T 3eb0_A           84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGI  162 (383)
T ss_dssp             --------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence                                      234899999998 5777766       469999999999999999999999999


Q ss_pred             eEEeee
Q 025443          241 VLCYQS  246 (252)
Q Consensus       241 V~~~~~  246 (252)
                      +|++..
T Consensus       163 ~H~Dik  168 (383)
T 3eb0_A          163 CHRDIK  168 (383)
T ss_dssp             ECSCCC
T ss_pred             ccCccC
Confidence            998653

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.86  E-value=1.8e-21  Score=167.64  Aligned_cols=122  Identities=21%  Similarity=0.299  Sum_probs=106.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+.     .+++.||+|+++...    .+.+.+|+.++..+..|+||+++++++...+ 
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~-  104 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-  104 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT-
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC-
Confidence            578999999999999999999853     467899999997532    4568899999999954999999999987654 


Q ss_pred             ceeEEEecCCCCCCHHhHc---cC----------------CCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---PT----------------LTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~~----------------l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +.+++|||||+||+|.+++   ..                +++..+..++.||+.||.|||++||||++..
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik  175 (316)
T 2xir_A          105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  175 (316)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCc
Confidence            3489999999999999999   11                7899999999999999999999999998653

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.86  E-value=5.8e-21  Score=167.21  Aligned_cols=123  Identities=24%  Similarity=0.404  Sum_probs=108.3

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCC---C
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQH---S  194 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~---~  194 (252)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||+++...    ...+.+|+.+++.++ |+||+++++++....   .
T Consensus         8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~   86 (353)
T 2b9h_A            8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK-HENIITIFNIQRPDSFENF   86 (353)
T ss_dssp             CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCSTTC
T ss_pred             ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCc-CCCcCCeeeeecccccCcc
Confidence            44689999999999999999999999999999999996432    456789999999999 999999999887541   1


Q ss_pred             ceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ...||||||++ |+|.+++  +.+++..+..++.||+.||+|||++||||++..
T Consensus        87 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlk  139 (353)
T 2b9h_A           87 NEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLK  139 (353)
T ss_dssp             CCEEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             ceEEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            34899999997 6999988  679999999999999999999999999998653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.86  E-value=2e-21  Score=185.01  Aligned_cols=120  Identities=18%  Similarity=0.216  Sum_probs=110.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||.||+|++..+++.||||++++.      ..+.+.+|..+|..+..|++|+++++++.+.+.  +
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~--~  417 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR--L  417 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE--E
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE--E
Confidence            57899999999999999999999999999999999742      346688999999998669999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||++||+|.+++   +.+++..++.|+.||+.||+|||++||||.+.
T Consensus       418 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDL  468 (674)
T 3pfq_A          418 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL  468 (674)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCC
T ss_pred             EEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccC
Confidence            9999999999999999   67999999999999999999999999999864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.85  E-value=3.4e-21  Score=168.99  Aligned_cols=122  Identities=27%  Similarity=0.367  Sum_probs=106.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCC----
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQH----  193 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~----  193 (252)
                      ..++|++++.||+|+||.||+|++..+|+.||||++....     ...+.+|+.+++.++ |+||+++++++.+..    
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~   93 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYN   93 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEEC-----
T ss_pred             cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhcc-CCCcccHhheeeccccccc
Confidence            3678999999999999999999999999999999985432     456789999999999 999999999998743    


Q ss_pred             --CceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          194 --SKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       194 --~~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        .+.+|||||||+| +|.+.+    ..+++.+++.++.||+.||+|||++||||++..
T Consensus        94 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  151 (351)
T 3mi9_A           94 RCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMK  151 (351)
T ss_dssp             ---CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             cCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence              2358999999984 777666    569999999999999999999999999998653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.85  E-value=3.7e-21  Score=175.05  Aligned_cols=118  Identities=14%  Similarity=0.236  Sum_probs=105.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||+|.+. ++..||||+++..  ..+.+.+|+.+|+.++ |+|||++++++.. +.  +||||
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~-~~--~~lv~  261 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQ-HDKLVKLHAVVTK-EP--IYIIT  261 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCC-CTTBCCEEEEECS-SS--CEEEE
T ss_pred             hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCC-CCCEeeEEEEEeC-Cc--cEEEE
Confidence            578999999999999999999984 5778999999753  4678999999999999 9999999999863 33  89999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||++|+|.+++     ..+++..+..++.||+.||+|||++||||.+..
T Consensus       262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlk  311 (454)
T 1qcf_A          262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR  311 (454)
T ss_dssp             CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCS
T ss_pred             eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence            999999999999     268999999999999999999999999998653

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.85  E-value=4e-21  Score=164.17  Aligned_cols=119  Identities=18%  Similarity=0.238  Sum_probs=104.0

Q ss_pred             CCCeEEEe-EeeecCceEEEEEEE--cCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVR-KVGRGKYSEVFEGIN--VNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~-~lG~G~fg~V~~~~~--~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++.+ .||+|+||.||+|.+  ..+++.||||+++...     .+.+.+|+.+++.++ |+||+++++++.. +. 
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~-   91 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRMIGICEA-ES-   91 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCC-CTTBCCEEEEEES-SS-
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEECC-CC-
Confidence            57899988 999999999999955  5567899999997532     467899999999999 9999999999944 33 


Q ss_pred             eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                       .++||||+++|+|.+++   +.+++..+..++.||+.||+|||++||||++..
T Consensus        92 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dik  144 (291)
T 1xbb_A           92 -WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA  144 (291)
T ss_dssp             -EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             -cEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCC
Confidence             89999999999999999   569999999999999999999999999998653

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.85  E-value=1.5e-21  Score=173.18  Aligned_cols=125  Identities=22%  Similarity=0.398  Sum_probs=103.0

Q ss_pred             ccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC-
Q 025443          120 QWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH-  193 (252)
Q Consensus       120 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~-  193 (252)
                      .|...++|++++.||+|+||.||+|.+..+|+.||||++...     ..+.+.+|+++|+.++ |+||+++++++.... 
T Consensus        24 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~  102 (367)
T 2fst_X           24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARS  102 (367)
T ss_dssp             EEEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSS
T ss_pred             ccCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEecCCc
Confidence            345568999999999999999999999999999999999642     2457889999999999 999999999997541 


Q ss_pred             ---CceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          194 ---SKTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       194 ---~~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                         ...+||||||+ +++|.+++  +.+++..++.++.||+.||+|||++||||++..
T Consensus       103 ~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlk  159 (367)
T 2fst_X          103 LEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK  159 (367)
T ss_dssp             GGGCCCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             cccCCeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence               13489999999 68999988  679999999999999999999999999998653

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.85  E-value=2.3e-21  Score=169.51  Aligned_cols=118  Identities=15%  Similarity=0.237  Sum_probs=107.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------h--------------HHHHHHHHHHHhcCCCCcce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------K--------------KKIKREIKILQNLCGGPNVV  183 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~--------------~~~~~Ei~il~~l~~h~nIv  183 (252)
                      .++|++.+.||+|+||.||+|.+  +++.||+|++....      .              +.+.+|+.+++.++ |+||+
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~  106 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NEYCL  106 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC-CTTBC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC-CCCcc
Confidence            57999999999999999999999  89999999996422      1              78999999999999 99999


Q ss_pred             eeeeEEEcCCCceeEEEecCCCCCCHHhH------c-----cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEeee
Q 025443          184 KLLDIVRDQHSKTPSLIFEYVNSTDFKVL------Y-----PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQS  246 (252)
Q Consensus       184 ~l~~~~~~~~~~~~~lV~E~~~gg~L~~~------l-----~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~~  246 (252)
                      ++++++.+.+.  +||||||++||+|.++      +     ..+++..+..++.||+.||.|||+ +||||++..
T Consensus       107 ~~~~~~~~~~~--~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~  179 (348)
T 2pml_X          107 TCEGIITNYDE--VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK  179 (348)
T ss_dssp             CCSEEEESSSE--EEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCC
T ss_pred             eEEEEEeeCCe--EEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCC
Confidence            99999998865  9999999999999998      5     358999999999999999999999 999998654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.85  E-value=4.8e-21  Score=163.92  Aligned_cols=121  Identities=20%  Similarity=0.300  Sum_probs=102.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC---cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN---ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..+|++.+.||+|+||.||+|.+..++   ..||+|.++...    .+.+.+|+.++++++ |+||+++++++...+ +.
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~-~~  101 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSE-GS  101 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCC-CTTBCCCCEEECCSS-SC
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCC-CCCEeeeeeEEEcCC-Cc
Confidence            457999999999999999999975443   468999986532    467889999999999 999999999875543 34


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .++||||++||+|.+++    ..+++..+..++.||+.||+|||++||+|++..
T Consensus       102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dik  155 (298)
T 3f66_A          102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA  155 (298)
T ss_dssp             CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCc
Confidence            89999999999999999    358999999999999999999999999998654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.85  E-value=5.2e-21  Score=174.03  Aligned_cols=118  Identities=19%  Similarity=0.262  Sum_probs=105.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||+|.+.. +..||||+++..  ..+.+.+|+.+|++++ |+||+++++++.+ +.  +||||
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~-~~--~~iv~  257 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EP--IYIVT  257 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SS--CEEEE
T ss_pred             hhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCC-CCCEeeEEEEEcC-Cc--eEEEe
Confidence            5789999999999999999999954 567999999753  3567999999999999 9999999999876 33  89999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||++|+|.+++     ..+++.++..++.||+.||+|||++||||.+..
T Consensus       258 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlk  307 (452)
T 1fmk_A          258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR  307 (452)
T ss_dssp             CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             hhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence            999999999999     348999999999999999999999999998653

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.85  E-value=4.3e-21  Score=178.15  Aligned_cols=118  Identities=19%  Similarity=0.262  Sum_probs=105.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||.||+|.+.. +..||||+++..  ..+.+.+|+++|+.++ |+|||++++++.+ +.  +||||
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~-~~--~~lv~  340 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EP--IYIVT  340 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SS--CEEEE
T ss_pred             hhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCC-CCCEeeEEEEEee-cc--ceEee
Confidence            3679999999999999999999954 567999999754  3578999999999999 9999999999876 33  89999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||++|+|.+++     ..+++.++..|+.||+.||+|||++||||++..
T Consensus       341 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlk  390 (535)
T 2h8h_A          341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR  390 (535)
T ss_dssp             CCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             ehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence            999999999999     348999999999999999999999999998653

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.85  E-value=2.8e-21  Score=169.70  Aligned_cols=125  Identities=25%  Similarity=0.396  Sum_probs=109.8

Q ss_pred             ccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          120 QWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       120 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .|...++|.+.+.||+|+||.||+|.+..+|+.||||++....     .+.+.+|+.+++.++ |+||+++++++...+.
T Consensus        19 ~~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~   97 (353)
T 3coi_A           19 AWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASS   97 (353)
T ss_dssp             EEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSS
T ss_pred             ccccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcC-CCCcccHhheEecccc
Confidence            3445689999999999999999999999999999999996432     456889999999999 9999999999987653


Q ss_pred             ----ceeEEEecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 ----KTPSLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ----~~~~lV~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                          ..+|+||||++ |+|.+++ ..+++..+..++.||+.||+|||++||||++..
T Consensus        98 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlk  153 (353)
T 3coi_A           98 LRNFYDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLK  153 (353)
T ss_dssp             GGGCCCCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCC
T ss_pred             cccceeEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence                12599999998 6999888 679999999999999999999999999998653

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.85  E-value=6.7e-23  Score=178.94  Aligned_cols=120  Identities=15%  Similarity=0.122  Sum_probs=99.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------hHHHHHHHHHHHhcC--------CCCccee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------KKKIKREIKILQNLC--------GGPNVVK  184 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------~~~~~~Ei~il~~l~--------~h~nIv~  184 (252)
                      .++|++++.||+|+||+||+|++  +|+.||||+++...           .+.+.+|+.+|+.++        +|+|||+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            46799999999999999999998  78999999997532           277899999999885        3777777


Q ss_pred             eeeEEE-----------------cC-----------CCceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHH
Q 025443          185 LLDIVR-----------------DQ-----------HSKTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSI  234 (252)
Q Consensus       185 l~~~~~-----------------~~-----------~~~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~y  234 (252)
                      +.+.+.                 +.           ..+.+|||||||++|++.+.+  +.+++.+++.|+.||+.||+|
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~  176 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAV  176 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            766543                 20           023499999999999766666  678999999999999999999


Q ss_pred             HH-HCCCeEEee
Q 025443          235 FI-RWSTVLCYQ  245 (252)
Q Consensus       235 LH-~~~IV~~~~  245 (252)
                      || ++||||++.
T Consensus       177 lH~~~~ivHrDl  188 (336)
T 2vuw_A          177 AEASLRFEHRDL  188 (336)
T ss_dssp             HHHHHCCBCSCC
T ss_pred             HHHhCCEeECCC
Confidence            99 999999864

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.85  E-value=3.2e-21  Score=163.61  Aligned_cols=119  Identities=14%  Similarity=0.255  Sum_probs=104.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .++|++.+.||+|+||.||++.+  +|..||+|+++.. ..+.+.+|+.+++.++ |+||+++++++.+.. +.+|+|||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~-~~~~lv~e   95 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEK-GGLYIVTE   95 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC--HHHHHTHHHHTTCC-CTTBCCEEEEECCC---CCEEEEC
T ss_pred             hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchhHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCC-CceEEEEe
Confidence            57899999999999999999988  5889999999764 3567899999999999 999999999976553 23899999


Q ss_pred             CCCCCCHHhHcc-----CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          203 YVNSTDFKVLYP-----TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       203 ~~~gg~L~~~l~-----~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |+++|+|.+++.     .+++..+..++.|++.||+|||++||+|++..
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  144 (278)
T 1byg_A           96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLA  144 (278)
T ss_dssp             CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence            999999999992     38999999999999999999999999998653

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.85  E-value=6.9e-21  Score=166.82  Aligned_cols=118  Identities=17%  Similarity=0.304  Sum_probs=105.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCC--CcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGG--PNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h--~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++++.||+|+||.||++.+ .+++.||||++....     .+.+.+|+.+|+.++ |  +||+++++++.+.+.  
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~~~iv~~~~~~~~~~~--   83 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-QHSDKIIRLYDYEITDQY--   83 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT-TTCTTBCCEEEEEECSSE--
T ss_pred             cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhh-hcCCceEEEeeeEeeCCE--
Confidence            57899999999999999999988 568899999997432     366889999999998 5  999999999998865  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +|||||+ .+|+|.+++   +.+++.++..|+.||+.||+|||++||||.+..
T Consensus        84 ~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDik  135 (343)
T 3dbq_A           84 IYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK  135 (343)
T ss_dssp             EEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            9999994 578999999   579999999999999999999999999998653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.85  E-value=6.3e-21  Score=162.00  Aligned_cols=119  Identities=24%  Similarity=0.365  Sum_probs=105.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC---CcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT---NERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++.+.||+|+||.||+|.+...   +..||+|++...    ..+.+.+|+.+++.++ |+||+++++++.++.   
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~---   86 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD-HPHIVKLIGIIEEEP---   86 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHC-CTTBCCEEEEECSSS---
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCC-CCCcceEEEEEcCCC---
Confidence            57899999999999999999997543   346999999754    2567889999999999 999999999987543   


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .|+||||+++|+|.+++    ..+++..+..++.||+.||.|||++||+|++..
T Consensus        87 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  140 (281)
T 3cc6_A           87 TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIA  140 (281)
T ss_dssp             CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCc
Confidence            79999999999999999    359999999999999999999999999998653

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.85  E-value=3.8e-21  Score=164.04  Aligned_cols=118  Identities=18%  Similarity=0.256  Sum_probs=103.9

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      +|.....||+|+||.||+|.+..++..||+|++....   .+.+.+|+.+++.++ |+||+++++++.+.+.  +++|||
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~--~~lv~e   99 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK-HKNIVQYLGSFSENGF--IKIFME   99 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCC-CTTBCCEEEEEEETTE--EEEEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCC-CCCEeeEeeEEEeCCc--EEEEEE
Confidence            3444458999999999999999999999999997543   567889999999999 9999999999998865  999999


Q ss_pred             CCCCCCHHhHc--c----CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          203 YVNSTDFKVLY--P----TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       203 ~~~gg~L~~~l--~----~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |++||+|.+++  .    .+++..+..++.||+.||+|||++||||++..
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  149 (295)
T 2clq_A          100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK  149 (295)
T ss_dssp             CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCC
Confidence            99999999998  1    46789999999999999999999999998653

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=1.1e-20  Score=161.23  Aligned_cols=119  Identities=17%  Similarity=0.291  Sum_probs=104.1

Q ss_pred             CCCeEEEe-EeeecCceEEEEEEEc--CCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVR-KVGRGKYSEVFEGINV--NTNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~-~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|.+.+ .||+|+||.||+|.+.  .++..||+|+++..    ..+.+.+|+++++.++ |+||+++++++..+ .  
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~-~--   83 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRLIGVCQAE-A--   83 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEESS-S--
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCC-CCCEeEEEEEecCC-C--
Confidence            56788877 9999999999999864  46788999999753    2467889999999998 99999999999543 3  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +++||||+++|+|.+++    ..+++..+..++.||+.||.|||++||+|++..
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  137 (287)
T 1u59_A           84 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLA  137 (287)
T ss_dssp             EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             cEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCc
Confidence            89999999999999998    459999999999999999999999999998654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.85  E-value=5.7e-21  Score=164.51  Aligned_cols=123  Identities=23%  Similarity=0.392  Sum_probs=103.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--------hHHHHHHHHHHHhcC--CCCcceeeeeEEEcC
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--------KKKIKREIKILQNLC--GGPNVVKLLDIVRDQ  192 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--------~~~~~~Ei~il~~l~--~h~nIv~l~~~~~~~  192 (252)
                      ..++|++++.||+|+||.||+|++..+++.||||+++...        ...+.+|+.+++.++  .|+||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            3679999999999999999999999999999999996322        346778888877664  299999999999876


Q ss_pred             CCc---eeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          193 HSK---TPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       193 ~~~---~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ...   .+++||||++ |+|.+++     ..+++.+++.++.||+.||+|||++||||++..
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlk  147 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLK  147 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            421   4899999997 6999998     238999999999999999999999999998654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=9.8e-21  Score=161.72  Aligned_cols=120  Identities=20%  Similarity=0.311  Sum_probs=104.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCc---EEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNE---RCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..|+..+.||+|+||.||+|.+..++.   .||+|++....    .+.+.+|+.+++.++ |+||+++++++.+.+. ..
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~-~~   98 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN-HPNVLALIGIMLPPEG-LP   98 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCC-CTTBCCCCEEECCSSS-CC
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEecCCC-Cc
Confidence            457788999999999999999866554   79999997532    467889999999999 9999999999987653 24


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ++||||+.+|+|.+++    ..+++..+..++.||+.||+|||++||+|++..
T Consensus        99 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dik  151 (298)
T 3pls_A           99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLA  151 (298)
T ss_dssp             EEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            9999999999999999    458999999999999999999999999998654

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=2.6e-21  Score=169.77  Aligned_cols=119  Identities=28%  Similarity=0.450  Sum_probs=102.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++++.||+|+||.||+|.+..+|+.||||+++...        .+.+.+|+.+++.++ |+||+++++++.+.+. 
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~-   86 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSN-   86 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTC-
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCC-CCCCCeEEEEEeeCCc-
Confidence            578999999999999999999999999999999996421        246789999999999 9999999999988866 


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                       ++|||||+++ +|.+++    ..+++..+..++.||+.||+|||++||||++..
T Consensus        87 -~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  139 (346)
T 1ua2_A           87 -ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLK  139 (346)
T ss_dssp             -CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             -eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCC
Confidence             9999999985 888887    358999999999999999999999999998653

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.85  E-value=9.8e-21  Score=161.10  Aligned_cols=119  Identities=16%  Similarity=0.195  Sum_probs=101.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+..+|+.||+|+++...     .+.+..|...++.++ |+||+++++++.+.+.  .|
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~iv~~~~~~~~~~~--~~   82 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD-CPFTVTFYGALFREGD--VW   82 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSS--EE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCC-CCeEEEEeeeeeccCC--EE
Confidence            578999999999999999999999999999999996532     223444555577777 9999999999998876  99


Q ss_pred             EEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHC-CCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRW-STVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~-~IV~~~~~  246 (252)
                      |||||++ |+|.+++       ..+++..+..++.||+.||+|||++ ||||++..
T Consensus        83 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlk  137 (290)
T 3fme_A           83 ICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVK  137 (290)
T ss_dssp             EEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCS
T ss_pred             EEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCC
Confidence            9999998 5887776       4699999999999999999999998 99998653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.85  E-value=1.9e-20  Score=176.56  Aligned_cols=119  Identities=17%  Similarity=0.286  Sum_probs=104.3

Q ss_pred             CCCeEEEe-EeeecCceEEEEEEEcC--CCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVR-KVGRGKYSEVFEGINVN--TNERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~-~lG~G~fg~V~~~~~~~--~~~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .+++.+.+ .||+|+||.||+|.+..  ++..||||+++..    ..+.+.+|+++|+.++ |+|||++++++.++ .  
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~-hpniv~l~~~~~~~-~--  409 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRLIGVCQAE-A--  409 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCC-CTTBCCEEEEEESS-S--
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCC-CCCEeeEEEEeccC-C--
Confidence            45677766 89999999999998863  4667999999753    3578999999999999 99999999999864 3  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +|||||||+||+|.+++    ..+++.++..|+.||+.||+|||++||||.+..
T Consensus       410 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlk  463 (613)
T 2ozo_A          410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLA  463 (613)
T ss_dssp             EEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             eEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCC
Confidence            89999999999999998    358999999999999999999999999998653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.85  E-value=2.6e-21  Score=168.17  Aligned_cols=119  Identities=15%  Similarity=0.216  Sum_probs=104.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcE----EEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNER----CIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~----vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++++.||+|+||.||+|.+..++..    ||+|.+...    ..+.+.+|+.+++.++ |+||+++++++.+. . 
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~-~-   88 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD-HAHIVRLLGLCPGS-S-   88 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCC-CTTBCCEEEEECBS-S-
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEcCC-c-
Confidence            67899999999999999999999888775    777777432    2356789999999999 99999999998643 3 


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                       .++||||+.+|+|.+++    ..+++..+..++.||+.||+|||++||||++..
T Consensus        89 -~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dik  142 (325)
T 3kex_A           89 -LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLA  142 (325)
T ss_dssp             -EEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             -cEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccc
Confidence             89999999999999998    368999999999999999999999999998653

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.85  E-value=1.3e-20  Score=164.14  Aligned_cols=120  Identities=18%  Similarity=0.271  Sum_probs=106.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEE----EEEEeec----cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERC----IIKILKP----VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~v----AvK~i~~----~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      ..++|++++.||+|+||.||+|.+..++..+    |+|.+..    ...+.+.+|+.+++.++ |+||+++++++.+.. 
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~-   90 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-   90 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCC-BTTBCCCCEEEESSS-
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCC-CCCeeEEEEEEecCC-
Confidence            3678999999999999999999998887755    6676643    23678899999999999 999999999998764 


Q ss_pred             ceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        .++||||+.+|+|.+++    ..+++..+..|+.||+.||.|||++||||++..
T Consensus        91 --~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  144 (327)
T 3lzb_A           91 --VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA  144 (327)
T ss_dssp             --EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             --ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCC
Confidence              78999999999999998    469999999999999999999999999998653

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.85  E-value=1.3e-20  Score=160.86  Aligned_cols=122  Identities=13%  Similarity=0.226  Sum_probs=105.0

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ...++|++.+.||+|+||.||+|++..+++.||||++... ..+.+.+|+.+++.++ |++++..+..+...+ +..+||
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~-~~~~i~~~~~~~~~~-~~~~lv   83 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ-GGVGIPTIRWCGAEG-DYNVMV   83 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHT-TSTTCCCEEEEEEET-TEEEEE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhh-cCCCCCccccccCCC-CceEEE
Confidence            3468999999999999999999999999999999998753 3467899999999999 777666555554333 348999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||+ +|+|.+++    +.+++..+..++.||+.||+|||++||||++..
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlk  132 (296)
T 3uzp_A           84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVK  132 (296)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             EEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence            9999 89999998    469999999999999999999999999998653

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.84  E-value=1.1e-20  Score=162.82  Aligned_cols=122  Identities=16%  Similarity=0.275  Sum_probs=102.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC---CCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN---TNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|.+.+.||+|+||.||+|.+..   ++..||+|+++...     .+.+.+|+.+++.++ |+||+++++++.+....
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS-HPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEC----
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCC-CCCeeeeeEEEeecccc
Confidence            5789999999999999999998865   45689999996432     456889999999999 99999999999876531


Q ss_pred             ---eeEEEecCCCCCCHHhHc---------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 ---TPSLIFEYVNSTDFKVLY---------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ---~~~lV~E~~~gg~L~~~l---------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                         ..++||||+++|+|.+++         ..+++..+..++.||+.||.|||++||||++..
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dik  174 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLA  174 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCS
T ss_pred             CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence               369999999999999998         358999999999999999999999999998654

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.84  E-value=2.2e-21  Score=167.27  Aligned_cols=120  Identities=18%  Similarity=0.282  Sum_probs=101.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---------hHHHHHHHHHHHhc----CCCCcceeeeeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---------KKKIKREIKILQNL----CGGPNVVKLLDIVR  190 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---------~~~~~~Ei~il~~l----~~h~nIv~l~~~~~  190 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++...         ...+.+|+.++.++    + |+||+++++++.
T Consensus        30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~-h~~i~~~~~~~~  108 (312)
T 2iwi_A           30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG-HPGVIRLLDWFE  108 (312)
T ss_dssp             ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCC-CSSBCCEEEEC-
T ss_pred             hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCC-CCCeeeEEEEEe
Confidence            578999999999999999999999999999999996532         23456899999999    7 999999999998


Q ss_pred             cCCCceeEEEecC-CCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          191 DQHSKTPSLIFEY-VNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       191 ~~~~~~~~lV~E~-~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +.+.  .++|||| +.+++|.+++   +.+++..+..++.||+.||+|||++||+|++..
T Consensus       109 ~~~~--~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  166 (312)
T 2iwi_A          109 TQEG--FMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIK  166 (312)
T ss_dssp             ------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCS
T ss_pred             cCCe--EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            8866  9999999 7899999999   569999999999999999999999999998654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.84  E-value=1.1e-20  Score=164.72  Aligned_cols=119  Identities=15%  Similarity=0.178  Sum_probs=108.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHh--cCCCCcceeeeeEEEcCCC--ceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQN--LCGGPNVVKLLDIVRDQHS--KTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~--l~~h~nIv~l~~~~~~~~~--~~~~l  199 (252)
                      .++|++.+.||+|+||.||+|.+  +++.||||++.....+.+.+|++++..  ++ |+||+++++++.....  ..+|+
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~-h~ni~~~~~~~~~~~~~~~~~~l  117 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWTQLWL  117 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHHSCCC-CTTBCCEEEEEECCCSSCCCEEE
T ss_pred             cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchhHHHHHHHHHHHHHhhcC-CCcEEEEEeeecccCCccceeEE
Confidence            46899999999999999999998  689999999987777888899999988  67 9999999999988751  14999


Q ss_pred             EecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHH--------HCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFI--------RWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH--------~~~IV~~~~  245 (252)
                      ||||+++|+|.+++  ..+++.++..++.||+.||.|||        ++||||++.
T Consensus       118 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dl  173 (342)
T 1b6c_B          118 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL  173 (342)
T ss_dssp             EECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCC
T ss_pred             EEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCC
Confidence            99999999999999  67999999999999999999999        899999865

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.84  E-value=2.7e-21  Score=167.65  Aligned_cols=120  Identities=13%  Similarity=0.222  Sum_probs=106.6

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ..++|++.+.||+|+||.||+|.+ .+++.||||++....    ...+.+|+++++.++ |+||+++++++.+.+.  .+
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~--~~  103 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTE--RL  103 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCC-CTTBCCCCEEECCSSC--CE
T ss_pred             HhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhcc-CCCccceEEEEecCCc--eE
Confidence            367899999999999999999985 568999999997533    336899999999999 9999999999998866  89


Q ss_pred             EEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRW---STVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~---~IV~~~~~  246 (252)
                      ||||||+||+|.+++       ..+++..+..++.||+.||+|||++   ||||++..
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlk  161 (326)
T 3uim_A          104 LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVK  161 (326)
T ss_dssp             EEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCS
T ss_pred             EEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCc
Confidence            999999999999998       1389999999999999999999999   99998653

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.84  E-value=1.7e-20  Score=165.06  Aligned_cols=121  Identities=24%  Similarity=0.358  Sum_probs=104.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--------------hHHHHHHHHHHHhcCCCCcceeeeeE
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--------------KKKIKREIKILQNLCGGPNVVKLLDI  188 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--------------~~~~~~Ei~il~~l~~h~nIv~l~~~  188 (252)
                      ..++|++.+.||+|+||.||+|.+. +|..||||++....              .+.+.+|+.+++.++ |+||++++++
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~   97 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH-HPNILGLRDI   97 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC-CTTBCCCSEE
T ss_pred             hccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC-CcCccceeee
Confidence            3688999999999999999999985 48999999995321              267899999999999 9999999999


Q ss_pred             EEcCC---CceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          189 VRDQH---SKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       189 ~~~~~---~~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +...+   ...+||||||++ |+|.+++    ..+++..+..++.||+.||.|||++||||++..
T Consensus        98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  161 (362)
T 3pg1_A           98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLH  161 (362)
T ss_dssp             EEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCC
Confidence            86532   235899999998 6888877    369999999999999999999999999998654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=1.2e-20  Score=163.98  Aligned_cols=120  Identities=17%  Similarity=0.236  Sum_probs=106.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhc--CCCCcceeeeeEEEcCCC--ceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNL--CGGPNVVKLLDIVRDQHS--KTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l--~~h~nIv~l~~~~~~~~~--~~~~l  199 (252)
                      .++|++.+.||+|+||.||+|.+  +++.||||++.........+|.+++..+  + |+||+++++++.+...  ..+||
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~-h~~i~~~~~~~~~~~~~~~~~~l  112 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTEEASWFRETEIYQTVLMR-HENILGFIAADIKGTGSWTQLYL  112 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCC-CTTBCCEEEEEEESCGGGCEEEE
T ss_pred             ccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEeccccchhhhHHHHHHHHhhc-CCCeeeEEEEEccCCCCCCceEE
Confidence            47899999999999999999998  4899999999877666777777777765  6 9999999999987632  34899


Q ss_pred             EecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHC--------CCeEEeee
Q 025443          200 IFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRW--------STVLCYQS  246 (252)
Q Consensus       200 V~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~--------~IV~~~~~  246 (252)
                      |||||+||+|.+++  ..+++..+..++.|++.||.|||++        ||||++..
T Consensus       113 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dik  169 (337)
T 3mdy_A          113 ITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK  169 (337)
T ss_dssp             EECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCC
T ss_pred             EEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccc
Confidence            99999999999999  6799999999999999999999999        99998653

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.84  E-value=1.2e-20  Score=168.51  Aligned_cols=119  Identities=17%  Similarity=0.298  Sum_probs=105.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCC-CCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCG-GPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~-h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..+|++++.||+|+||.||+|.+.. ++.||||++....     .+.+.+|+.+|+.++. |+||+++++++...+.  +
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~--~  131 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY--I  131 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--E
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCE--E
Confidence            4569999999999999999999854 8999999996432     4678999999999983 5999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||| +.+|+|.+++   ..+++.++..|+.||+.||.|||++||||.+..
T Consensus       132 ~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlk  182 (390)
T 2zmd_A          132 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK  182 (390)
T ss_dssp             EEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCC
T ss_pred             EEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            99999 5679999998   578999999999999999999999999998653

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.84  E-value=1.1e-20  Score=163.05  Aligned_cols=116  Identities=19%  Similarity=0.246  Sum_probs=103.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .++|++.+.||+|+||.||+|.+  .++.||+|++.... .+.+.+|++++++++ |+||+++++++.+  .  .|||||
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~--~--~~lv~e   79 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVN-HPNIVKLYGACLN--P--VCLVME   79 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSSTTHHHHHHHHHHHHHHCC-CTTBCCEEEBCTT--T--TEEEEE
T ss_pred             HhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecChhHHHHHHHHHHHHhcCC-CCCcCeEEEEEcC--C--cEEEEE
Confidence            57899999999999999999998  57889999997543 567899999999999 9999999998763  2  799999


Q ss_pred             CCCCCCHHhHc------cCCCHHHHHHHHHHHHHHHHHHHH---CCCeEEeee
Q 025443          203 YVNSTDFKVLY------PTLTDYDIRYYIYELLKVMSIFIR---WSTVLCYQS  246 (252)
Q Consensus       203 ~~~gg~L~~~l------~~l~~~~~~~i~~qi~~aL~yLH~---~~IV~~~~~  246 (252)
                      |++||+|.+++      ..+++..+..++.||++||+|||+   +||||++..
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlk  132 (307)
T 2eva_A           80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK  132 (307)
T ss_dssp             CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCS
T ss_pred             cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCC
Confidence            99999999999      247899999999999999999999   899998653

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.84  E-value=1.5e-20  Score=160.31  Aligned_cols=122  Identities=13%  Similarity=0.226  Sum_probs=100.6

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ...++|++.+.||+|+||.||+|.+..+++.||||++... ..+.+.+|+.+++.++ |++++..++.+.... ...+||
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~-~~~~i~~~~~~~~~~-~~~~lv   83 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ-GGVGIPTIRWCGAEG-DYNVMV   83 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHT-TSTTCCCEEEEEEET-TEEEEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhc-CCCCCCeeeeecCCC-CceEEE
Confidence            3468899999999999999999999999999999987643 3456889999999999 777666666554333 348999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||+ +|+|.+++    ..+++.++..++.||+.||.|||++||||++..
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  132 (296)
T 4hgt_A           84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVK  132 (296)
T ss_dssp             EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            9999 89999998    469999999999999999999999999998653

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.84  E-value=1.8e-20  Score=163.92  Aligned_cols=121  Identities=19%  Similarity=0.336  Sum_probs=100.8

Q ss_pred             CCCCeEEEe-EeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHH-HHhcCCCCcceeeeeEEEcCC--CceeE
Q 025443          123 DQDDYEVVR-KVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKI-LQNLCGGPNVVKLLDIVRDQH--SKTPS  198 (252)
Q Consensus       123 ~~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~i-l~~l~~h~nIv~l~~~~~~~~--~~~~~  198 (252)
                      ..++|.+.+ .||+|+||.||+|.+..+|+.||||++....  ...+|+.. ++.++ |+||+++++++....  ...++
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~e~~~~~~~~~-h~~i~~~~~~~~~~~~~~~~~~  102 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--KARQEVDHHWQASG-GPHIVCILDVYENMHHGKRCLL  102 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH--HHHHHHHHHHHHTT-STTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH--HHHHHHHHHHHhcC-CCChHHHHHHHhhccCCCceEE
Confidence            367899965 5999999999999999999999999997542  23344444 45555 999999999997621  24489


Q ss_pred             EEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||+||+|.+++     ..+++.+++.++.||+.||.|||++||||++..
T Consensus       103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlk  155 (336)
T 3fhr_A          103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVK  155 (336)
T ss_dssp             EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            999999999999999     259999999999999999999999999998643

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.84  E-value=2.9e-20  Score=175.96  Aligned_cols=116  Identities=19%  Similarity=0.245  Sum_probs=101.0

Q ss_pred             CeEE-EeEeeecCceEEEEEEE--cCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          126 DYEV-VRKVGRGKYSEVFEGIN--VNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       126 ~y~~-~~~lG~G~fg~V~~~~~--~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .+.+ .+.||+|+||.||+|.+  ..+++.||||+++...     .+.+.+|+++|++++ |+|||++++++..+ .  +
T Consensus       369 ~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~-~--~  444 (635)
T 4fl3_A          369 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRMIGICEAE-S--W  444 (635)
T ss_dssp             GEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCC-CTTBCCEEEEEESS-S--E
T ss_pred             hccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC-C--E
Confidence            3444 34899999999999965  4567899999997532     467999999999999 99999999999754 3  8


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +||||||+||+|.+++   ..+++.++..|+.||+.||+|||++||||.+.
T Consensus       445 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDL  495 (635)
T 4fl3_A          445 MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL  495 (635)
T ss_dssp             EEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             EEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCC
Confidence            9999999999999999   56999999999999999999999999999864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.84  E-value=1.1e-20  Score=161.51  Aligned_cols=116  Identities=11%  Similarity=0.175  Sum_probs=100.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++.+.||+|+||.||+|.+.   ..||+|+++...     .+.+.+|+.+++.++ |+||++++++.... .  ++
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~-~--~~   95 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTAP-Q--LA   95 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSS-S--CE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCcEEEEEeeccCC-c--cE
Confidence            678999999999999999999863   359999996432     467899999999999 99999999965443 3  89


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +|||||+|++|.+++    ..+++..+..++.||+.||.|||++||+|++..
T Consensus        96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlk  147 (289)
T 3og7_A           96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK  147 (289)
T ss_dssp             EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCc
Confidence            999999999999998    468999999999999999999999999998653

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.84  E-value=1.6e-20  Score=162.83  Aligned_cols=122  Identities=16%  Similarity=0.222  Sum_probs=106.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEc------CCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRD------QHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~------~~~  194 (252)
                      ..+|++.+.||+|+||.||+|.+..+++.||||++....   .+.+.+|+.+++++.+|+||+++++++..      ...
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            468999999999999999999999999999999986443   45688999999999669999999999952      222


Q ss_pred             ceeEEEecCCCCCCHHhHc------cCCCHHHHHHHHHHHHHHHHHHHHCC--CeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKVMSIFIRWS--TVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l------~~l~~~~~~~i~~qi~~aL~yLH~~~--IV~~~~~  246 (252)
                      ..++|||||++ |+|.+++      +.+++.++..++.||+.||.|||++|  |||++..
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dik  165 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLK  165 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCC
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCC
Confidence            45899999997 7898887      35999999999999999999999999  9998653

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.84  E-value=1.2e-20  Score=167.31  Aligned_cols=122  Identities=19%  Similarity=0.293  Sum_probs=104.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcC-------CCCcceeeeeEEEcC--
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLC-------GGPNVVKLLDIVRDQ--  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~-------~h~nIv~l~~~~~~~--  192 (252)
                      .++|++.+.||+|+||.||+|++..+++.||||+++...  .+.+.+|+.+++.++       .|+||+++++++...  
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            578999999999999999999999999999999997543  467889999999985       167899999999832  


Q ss_pred             CCceeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHC-CCeEEeee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRW-STVLCYQS  246 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~-~IV~~~~~  246 (252)
                      ....+||||||+. |+|.+++     +.+++..++.|+.||+.||+|||++ ||||++..
T Consensus       116 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDik  174 (397)
T 1wak_A          116 NGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIK  174 (397)
T ss_dssp             TEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCS
T ss_pred             CCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            2245999999995 5666655     3599999999999999999999999 99998653

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.84  E-value=8.2e-21  Score=166.81  Aligned_cols=118  Identities=13%  Similarity=0.142  Sum_probs=102.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC--------CcEEEEEEeeccchHHHHHHHHHHHhcCCCCccee-----------
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT--------NERCIIKILKPVKKKKIKREIKILQNLCGGPNVVK-----------  184 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~--------~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~-----------  184 (252)
                      .++|++.+.||+|+||.||+|.+..+        ++.||+|++...  +.+.+|++++++++ |+||++           
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~  117 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRAA-KPLQVNKWKKLYSTPLL  117 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHHC-CHHHHHHHHHHTTCTTC
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHhc-ccchhhhhhhhccCCcc
Confidence            57899999999999999999999874        889999999754  56889999999999 999987           


Q ss_pred             ----eeeEEEcCCCceeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          185 ----LLDIVRDQHSKTPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       185 ----l~~~~~~~~~~~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                          +++++...+ +.+||||||+ ||+|.+++     ..+++.++..++.||+.||+|||++||||++..
T Consensus       118 ~i~~~~~~~~~~~-~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dik  186 (352)
T 2jii_A          118 AIPTCMGFGVHQD-KYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVT  186 (352)
T ss_dssp             SCCCCCEEEEETT-TEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCC
T ss_pred             CccchhhccccCC-cEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence                667776633 4599999999 89999999     359999999999999999999999999998653

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.84  E-value=2.7e-20  Score=161.89  Aligned_cols=119  Identities=13%  Similarity=0.159  Sum_probs=102.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHH--hcCCCCcceeeeeEEEc---CCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQ--NLCGGPNVVKLLDIVRD---QHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~--~l~~h~nIv~l~~~~~~---~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+  +++.||||+++......+..|.+++.  .++ |+||+++++.+..   .+...+|
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~-h~~i~~~~~~~~~~~~~~~~~~~   88 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINEKNIYRVPLME-HDNIARFIVGDERVTADGRMEYL   88 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECTTSCEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CcchhhheecccccccCCCceEE
Confidence            68999999999999999999977  78999999998776666666666654  477 9999999986643   2223579


Q ss_pred             EEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHC---------CCeEEee
Q 025443          199 LIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRW---------STVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~---------~IV~~~~  245 (252)
                      ||||||+||+|.+++  ..+++..+..++.||+.||+|||++         ||||++.
T Consensus        89 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Di  146 (336)
T 3g2f_A           89 LVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDL  146 (336)
T ss_dssp             EEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSC
T ss_pred             EEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeeccc
Confidence            999999999999999  6679999999999999999999999         9999865

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.84  E-value=1.7e-20  Score=162.54  Aligned_cols=119  Identities=20%  Similarity=0.316  Sum_probs=105.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEE-cCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCC------cceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGIN-VNTNERCIIKILKPVK--KKKIKREIKILQNLCGGP------NVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~-~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~------nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+ ..+++.||+|+++...  .+.+.+|+.+++.++ |+      +|+++++++.+.+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN-TTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHH-HHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhh-hcCCCCceeeEeeecccccCCc
Confidence            57999999999999999999998 5678999999997543  467889999999987 65      49999999998865


Q ss_pred             ceeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        +||||||+ +++|.+++     ..+++..+..++.||+.||+|||++||||++..
T Consensus        92 --~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  145 (339)
T 1z57_A           92 --ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLK  145 (339)
T ss_dssp             --EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             --EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence              99999999 78999998     258999999999999999999999999998653

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.84  E-value=8.5e-21  Score=180.82  Aligned_cols=122  Identities=18%  Similarity=0.281  Sum_probs=105.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc---
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK---  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~---  195 (252)
                      .++|++.+.||+|+||.||+|.+.. +|+.||||++....    ...+.+|+.+++.++ |+|||++++++...+..   
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV-HPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEEECTTSCE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcC-CCCcCeEeeeEeecCCCCCc
Confidence            5899999999999999999999976 78999999986432    356789999999999 99999999999876431   


Q ss_pred             eeEEEecCCCCCCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ..||||||++|++|.+++ ..+++.++..|+.||+.||+|||++||||++..
T Consensus       158 ~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlk  209 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLK  209 (681)
T ss_dssp             EEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             eeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccC
Confidence            269999999999999988 679999999999999999999999999998653

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.83  E-value=7.6e-21  Score=166.66  Aligned_cols=121  Identities=12%  Similarity=0.137  Sum_probs=99.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC---CCcEEEEEEeeccc--------------hHHHHHHHHHHHhcCCCCcceeee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN---TNERCIIKILKPVK--------------KKKIKREIKILQNLCGGPNVVKLL  186 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vAvK~i~~~~--------------~~~~~~Ei~il~~l~~h~nIv~l~  186 (252)
                      .++|++.+.||+|+||.||+|.+..   ++..+|+|++....              ...+.+|+.+++.++ |+||++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~ni~~~~  114 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLD-YLGIPLFY  114 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCS-CCCCCCEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhcccc-ccCcceee
Confidence            5789999999999999999999987   78899999997532              223668888999998 99999999


Q ss_pred             eEEEcC--CCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          187 DIVRDQ--HSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       187 ~~~~~~--~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +++.+.  +...+||||||| |++|.+++   +.+++.++..++.||+.||+|||++||||++..
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  178 (345)
T 2v62_A          115 GSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIK  178 (345)
T ss_dssp             EEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             cccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcC
Confidence            999872  124599999999 89999999   469999999999999999999999999998653

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.83  E-value=2.7e-20  Score=168.27  Aligned_cols=120  Identities=18%  Similarity=0.373  Sum_probs=106.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcC-----CCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLC-----GGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~-----~h~nIv~l~~~~~~~~~~~  196 (252)
                      ..+|++++.||+|+||.||+|.+..+++.||||+++...  .+.+.+|+.+++.++     .|+||+++++++...+.  
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~--  173 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH--  173 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE--
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe--
Confidence            578999999999999999999999999999999997643  456788999998874     27799999999998865  


Q ss_pred             eEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||||++ |+|.+++     ..+++..++.|+.||+.||+|||++||||++..
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlK  227 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLK  227 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCS
T ss_pred             EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            999999997 6899888     348999999999999999999999999998653

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.83  E-value=1.4e-20  Score=161.72  Aligned_cols=116  Identities=18%  Similarity=0.198  Sum_probs=102.6

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .|...+.||+|+||.||+|.+  ++..||+|++...       ..+.+.+|+.+++.++ |+||+++++++.+.+.  .+
T Consensus        32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~--~~  106 (307)
T 2nru_A           32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVELLGFSSDGDD--LC  106 (307)
T ss_dssp             TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS--CE
T ss_pred             ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC-CCCeEEEEEEEecCCc--eE
Confidence            344558999999999999987  6889999998642       2467899999999999 9999999999998866  99


Q ss_pred             EEecCCCCCCHHhHc------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||++||+|.+++      ..+++..+..++.||+.||+|||++||||++..
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlk  160 (307)
T 2nru_A          107 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIK  160 (307)
T ss_dssp             EEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             EEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCC
Confidence            999999999999998      248999999999999999999999999998653

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.83  E-value=1.5e-20  Score=165.92  Aligned_cols=121  Identities=11%  Similarity=0.152  Sum_probs=100.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC-----CcEEEEEEeeccch--------------HHHHHHHHHHHhcCCCCccee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT-----NERCIIKILKPVKK--------------KKIKREIKILQNLCGGPNVVK  184 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vAvK~i~~~~~--------------~~~~~Ei~il~~l~~h~nIv~  184 (252)
                      .++|++.+.||+|+||.||+|.+..+     ++.||||++.....              ..+..|+..+..++ |+||++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~~iv~  112 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLK-YLGVPK  112 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCS-CCCSCC
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhcc-CCCCCe
Confidence            56899999999999999999998764     57899999875431              12334555666677 999999


Q ss_pred             eeeEEEcCCC--ceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          185 LLDIVRDQHS--KTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       185 l~~~~~~~~~--~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +++++.....  ...||||||| ||+|.+++    ..+++.++..|+.||+.||+|||++||||++..
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlk  179 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIK  179 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCC
Confidence            9999876422  3489999999 99999999    469999999999999999999999999998653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=1.3e-20  Score=167.54  Aligned_cols=120  Identities=20%  Similarity=0.309  Sum_probs=103.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCC---cEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTN---ERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ..|++.+.||+|+||.||+|.+..++   ..||+|.++..    ..+.+.+|+.++++++ |+||+++++++.+.+ +..
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~-~~~  166 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSE-GSP  166 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCC-CTTBCCCCEEECCCS-SCC
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-CCe
Confidence            45889999999999999999986443   46899998642    2467899999999999 999999999876543 338


Q ss_pred             EEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||||+++|+|.+++    ..+++.++..++.||+.||+|||++||||++..
T Consensus       167 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  219 (373)
T 3c1x_A          167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLA  219 (373)
T ss_dssp             EEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccc
Confidence            9999999999999999    358899999999999999999999999998653

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.83  E-value=3.8e-21  Score=170.62  Aligned_cols=120  Identities=12%  Similarity=0.195  Sum_probs=98.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHH---HHhcCCCCcceeee-------e
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKI---LQNLCGGPNVVKLL-------D  187 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~i---l~~l~~h~nIv~l~-------~  187 (252)
                      .++|++.+.||+|+||.||+|.+..+|+.||||+++..      ..+.+.+|+.+   |+.++ |||||+++       +
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~-hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK-NQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCC-SHHHHHHHHCBCCCSE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccC-CHHHHHHHhhhhhhhh
Confidence            57899999999999999999999899999999999632      24678899955   45556 99999998       7


Q ss_pred             EEEcCCC----------c-----eeEEEecCCCCCCHHhHc---cCCCH-------HHHHHHHHHHHHHHHHHHHCCCeE
Q 025443          188 IVRDQHS----------K-----TPSLIFEYVNSTDFKVLY---PTLTD-------YDIRYYIYELLKVMSIFIRWSTVL  242 (252)
Q Consensus       188 ~~~~~~~----------~-----~~~lV~E~~~gg~L~~~l---~~l~~-------~~~~~i~~qi~~aL~yLH~~~IV~  242 (252)
                      ++.+.+.          +     ..||||||| +|+|.+++   +.+++       ..+..|+.||+.||+|||++||||
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  229 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  229 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            7665531          0     278999999 58999999   34555       778889999999999999999999


Q ss_pred             Eee
Q 025443          243 CYQ  245 (252)
Q Consensus       243 ~~~  245 (252)
                      .+.
T Consensus       230 rDi  232 (377)
T 3byv_A          230 TYL  232 (377)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            865

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.83  E-value=1.5e-20  Score=163.11  Aligned_cols=122  Identities=21%  Similarity=0.319  Sum_probs=109.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---------hHHHHHHHHHHHhcC-CCCcceeeeeEEEcC
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---------KKKIKREIKILQNLC-GGPNVVKLLDIVRDQ  192 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---------~~~~~~Ei~il~~l~-~h~nIv~l~~~~~~~  192 (252)
                      ..++|++.+.||+|+||.||+|.+..+++.||||+++...         .+.+.+|+.+++.++ +|+||+++++++.+.
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            3678999999999999999999999999999999997532         245778999999997 269999999999988


Q ss_pred             CCceeEEEecCCCC-CCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          193 HSKTPSLIFEYVNS-TDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       193 ~~~~~~lV~E~~~g-g~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +.  +++|||++.+ ++|.+++   ..+++..+..++.||+.||+|||++||||++..
T Consensus       121 ~~--~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlk  176 (320)
T 3a99_A          121 DS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK  176 (320)
T ss_dssp             SE--EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             Cc--EEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCC
Confidence            65  9999999986 8999998   579999999999999999999999999998653

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.83  E-value=1.4e-20  Score=168.48  Aligned_cols=120  Identities=22%  Similarity=0.334  Sum_probs=98.0

Q ss_pred             CCeEE-EeEeeecCceEEEEEEEc--CCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          125 DDYEV-VRKVGRGKYSEVFEGINV--NTNERCIIKILKPVK-KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       125 ~~y~~-~~~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~~-~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      +.|++ .++||+|+||.||+|.+.  .+++.||||+++... ...+.+|+.+|+.++ |+|||++++++.......+|||
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~lv   98 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLL   98 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCC-CTTBCCCCEEEEETTTTEEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcC-CCCeeeEeeEEecCCCCeEEEE
Confidence            45776 457999999999999976  468899999997543 457889999999999 9999999999976554669999


Q ss_pred             ecCCCCCCHHhHcc------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLYP------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l~------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||++ |+|.+++.            .+++..++.|+.||+.||+|||++||||++..
T Consensus        99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlk  155 (405)
T 3rgf_A           99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLK  155 (405)
T ss_dssp             EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcC
Confidence            99997 58887771            39999999999999999999999999998653

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.83  E-value=2.1e-20  Score=159.11  Aligned_cols=119  Identities=16%  Similarity=0.193  Sum_probs=98.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-CCc--EEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-TNE--RCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-~~~--~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+.. ++.  .||+|+++..      ..+.+.+|+.+++.++ |+||+++++++.+.. 
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~-   94 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLTPP-   94 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSS-
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCC-CCCcccEEEEEccCC-
Confidence            5789999999999999999998754 333  6899998643      2467889999999999 999999999998764 


Q ss_pred             ceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        .++||||+++|+|.+++    ..+++..+..++.||+.||.|||++||+|++..
T Consensus        95 --~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dik  148 (291)
T 1u46_A           95 --MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLA  148 (291)
T ss_dssp             --CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             --ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCc
Confidence              79999999999999998    459999999999999999999999999998653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.83  E-value=2e-20  Score=168.64  Aligned_cols=119  Identities=19%  Similarity=0.310  Sum_probs=101.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCC----CceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQH----SKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~----~~~~~l  199 (252)
                      ..+|++.+.||+|+||.||+|.+..+|+.||||++.... ....+|+++|+.++ |+|||++++++...+    ...++|
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~E~~il~~l~-hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-TSCCHHHHHHHTCC-CTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-hhHHHHHHHHHHcC-CCCccceeeEEeccCCCCcceeEEe
Confidence            357999999999999999999999999999999996542 33458999999999 999999999986422    224789


Q ss_pred             EecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+++ +|.+++       ..+++..++.|+.||+.||+|||++||||.+.
T Consensus       131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDl  182 (420)
T 1j1b_A          131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDI  182 (420)
T ss_dssp             EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCC
T ss_pred             ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            9999985 666554       46999999999999999999999999999864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.82  E-value=3.2e-20  Score=170.36  Aligned_cols=121  Identities=19%  Similarity=0.281  Sum_probs=105.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      ..++|++++.||+|+||.||+|++..+++.||||+++.. ..+.+.+|+++++.|+.+++|+.+..++.+.+.  .||||
T Consensus         5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~--~~lvm   82 (483)
T 3sv0_A            5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDY--NVLVM   82 (483)
T ss_dssp             ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTE--EEEEE
T ss_pred             cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCE--EEEEE
Confidence            357899999999999999999999999999999998743 345688999999999944666666666666644  89999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||+ |++|.+++    +.+++.+++.|+.||+.||+|||++||||++..
T Consensus        83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIK  130 (483)
T 3sv0_A           83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIK  130 (483)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence            999 89999998    479999999999999999999999999998654

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.82  E-value=4.7e-20  Score=159.57  Aligned_cols=121  Identities=25%  Similarity=0.446  Sum_probs=103.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-CCCcEEEEEEeeccc-----hHHHHHHHHHHHhc---CCCCcceeeeeEEEc---
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-NTNERCIIKILKPVK-----KKKIKREIKILQNL---CGGPNVVKLLDIVRD---  191 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l---~~h~nIv~l~~~~~~---  191 (252)
                      .++|++.+.||+|+||.||+|.+. .+++.||+|+++...     ...+.+|+.+++.+   + |+||+++++++..   
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE-HPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTC-CTTBCCEEEEEEEEEC
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccC-CCCeEeeeeeeeeccc
Confidence            578999999999999999999995 678999999996422     34577888888877   6 9999999999872   


Q ss_pred             CCCceeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          192 QHSKTPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       192 ~~~~~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .....++|||||++ |+|.+++     ..+++..+..++.||+.||.|||++||||++..
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlk  147 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLK  147 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Confidence            12245999999998 6999998     238999999999999999999999999998653

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.82  E-value=7.3e-20  Score=157.90  Aligned_cols=119  Identities=17%  Similarity=0.296  Sum_probs=105.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCC-CCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCG-GPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~-h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||.||+|.+. +++.||||++....     .+.+.+|+.+++.++. |+||+++++++.+.+.  +
T Consensus        27 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~--~  103 (313)
T 3cek_A           27 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY--I  103 (313)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE--E
T ss_pred             cceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE--E
Confidence            578999999999999999999984 58899999996432     4678899999999983 4999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||| +.+++|.+++   +.+++..+..++.||+.||.|||++||+|++..
T Consensus       104 ~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlk  154 (313)
T 3cek_A          104 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK  154 (313)
T ss_dssp             EEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence            99999 5578999998   568999999999999999999999999998654

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.82  E-value=9.2e-20  Score=159.09  Aligned_cols=119  Identities=18%  Similarity=0.297  Sum_probs=103.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC-cEEEEEEeeccc--hHHHHHHHHHHHhcCCCCc------ceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN-ERCIIKILKPVK--KKKIKREIKILQNLCGGPN------VVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~n------Iv~l~~~~~~~~~  194 (252)
                      .++|++.+.||+|+||.||+|.+..++ ..||+|+++...  .+.+.+|+.+++.++ |++      ++.+++++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIK-EKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHH-HHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHh-hcCCCCceeEEEeeeeeeeCCe
Confidence            589999999999999999999998777 689999997532  467889999999998 665      8999999998865


Q ss_pred             ceeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        +||||||++ |+|.+++     ..+++.++..++.||+.||+|||++||||++..
T Consensus        97 --~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlk  150 (355)
T 2eu9_A           97 --MCIAFELLG-KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLK  150 (355)
T ss_dssp             --EEEEEECCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred             --EEEEEeccC-CChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence              999999995 6666666     359999999999999999999999999998653

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.81  E-value=1.4e-19  Score=157.01  Aligned_cols=119  Identities=12%  Similarity=0.237  Sum_probs=101.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHH-HHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIK-ILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~-il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+..+|+.||||+++...    ...+.+|+. +++.++ |+||+++++++.+.+.  .+
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~-h~niv~~~~~~~~~~~--~~   97 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSD-CPYIVQFYGALFREGD--CW   97 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCC-CTTBCCEEEEEECSSE--EE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCC-CCcEeeeeeEEEeCCc--eE
Confidence            578999999999999999999999999999999997532    334566666 666677 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc--------cCCCHHHHHHHHHHHHHHHHHHHHC-CCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY--------PTLTDYDIRYYIYELLKVMSIFIRW-STVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l--------~~l~~~~~~~i~~qi~~aL~yLH~~-~IV~~~~~  246 (252)
                      |||||++| +|.+++        ..+++..+..++.|++.||.|||++ ||||++..
T Consensus        98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlk  153 (327)
T 3aln_A           98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIK  153 (327)
T ss_dssp             EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCC
T ss_pred             EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCC
Confidence            99999985 777665        4689999999999999999999999 99998654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.81  E-value=1.9e-19  Score=155.09  Aligned_cols=119  Identities=13%  Similarity=0.115  Sum_probs=95.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||.||+|.+..+|+.||||++....     .+.+..+..+++.++ |+||+++++++.+.+.  +|
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~--~~  100 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHD-CPYIVQCFGTFITNTD--VF  100 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTT-CTTBCCEEEEEECSSE--EE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcC-CCceeeEEEEEecCCc--EE
Confidence            578999999999999999999999999999999997543     223344555677777 9999999999998865  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHC-CCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRW-STVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~-~IV~~~~~  246 (252)
                      |||||+ ++.+..++    ..+++..+..++.||+.||.|||++ ||||++..
T Consensus       101 lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlk  152 (318)
T 2dyl_A          101 IAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVK  152 (318)
T ss_dssp             EEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred             EEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCC
Confidence            999999 56666665    5799999999999999999999995 99998653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.81  E-value=1.8e-20  Score=161.73  Aligned_cols=117  Identities=16%  Similarity=0.204  Sum_probs=104.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++.+.||+|+||.||+|.+..   .+|+|+++..     ..+.+.+|+.+++.++ |+||+++++++.+.+.  ++
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~--~~  105 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTR-HENVVLFMGACMSPPH--LA  105 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCC-CTTBCCCCEEEECSSC--EE
T ss_pred             HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCc--eE
Confidence            5789999999999999999999843   4999999642     2456789999999999 9999999999998876  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +||||++|++|.+++    ..+++..+..++.||+.||+|||++||+|++..
T Consensus       106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlk  157 (319)
T 2y4i_B          106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLK  157 (319)
T ss_dssp             EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence            999999999999999    258999999999999999999999999998653

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.81  E-value=1.1e-19  Score=160.20  Aligned_cols=122  Identities=23%  Similarity=0.346  Sum_probs=106.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcC----------CCCcceeeeeEEEc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLC----------GGPNVVKLLDIVRD  191 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~----------~h~nIv~l~~~~~~  191 (252)
                      .++|++.+.||+|+||.||+|.+..+++.||||++....  .+.+.+|++++++++          +|+||+++++++..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            578999999999999999999999999999999997543  466889999999876          26899999999986


Q ss_pred             CC--CceeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHC-CCeEEeee
Q 025443          192 QH--SKTPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRW-STVLCYQS  246 (252)
Q Consensus       192 ~~--~~~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~-~IV~~~~~  246 (252)
                      .+  ...++|||||+ |++|.+++     ..+++..+..++.||+.||+|||++ ||||++..
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dik  159 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIK  159 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCS
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Confidence            53  12589999999 79999998     3499999999999999999999998 99998653

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.81  E-value=7.5e-20  Score=163.52  Aligned_cols=119  Identities=24%  Similarity=0.360  Sum_probs=98.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC----ceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS----KTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~----~~~~l  199 (252)
                      ..+|++.+.||+|+||.||+|.+..++. +|+|++.... ....+|+++|+.++ |+||+++++++...+.    ..++|
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~-~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK-RFKNRELQIMRIVK-HPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCT-TSCCHHHHHHHTCC-CTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCc-chHHHHHHHHHhCC-CCCcceEEEEEEecCCCCCceEEEE
Confidence            4679999999999999999999977665 8888875432 22347999999999 9999999999975432    24789


Q ss_pred             EecCCCCCCHHhHc------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||+++.+..+.      +.+++..++.|+.||+.||+|||++||||++.
T Consensus       116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl  167 (394)
T 4e7w_A          116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDI  167 (394)
T ss_dssp             EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCC
Confidence            99999865444333      57999999999999999999999999999865

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.80  E-value=1.6e-19  Score=163.43  Aligned_cols=118  Identities=13%  Similarity=0.062  Sum_probs=98.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      .+.|...+.||+|+||+||.+ ...+|+.||||++.....+.+.+|+.+|+.+.+|||||++++++.+.+.  +||||||
T Consensus        14 ~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~--~~lv~E~   90 (434)
T 2rio_A           14 KNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRF--LYIALEL   90 (434)
T ss_dssp             SSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSE--EEEEECC
T ss_pred             hheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCe--EEEEEec
Confidence            456777899999999999875 4468999999999877777889999999987449999999999988865  9999999


Q ss_pred             CCCCCHHhHcc--C-C-------CHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLYP--T-L-------TDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l~--~-l-------~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+ |+|.+++.  . .       ++..+..++.||+.||+|||++||||++.
T Consensus        91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDL  141 (434)
T 2rio_A           91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDL  141 (434)
T ss_dssp             CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCC
Confidence            96 69999992  1 1       23345689999999999999999999865

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.80  E-value=1.2e-19  Score=160.50  Aligned_cols=120  Identities=15%  Similarity=0.113  Sum_probs=87.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhc--CCCCcceeee-------eE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNL--CGGPNVVKLL-------DI  188 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l--~~h~nIv~l~-------~~  188 (252)
                      ..+|++.+.||+|+||.||+|.+..+|+.||||++....      .+.+.+|+.+++.+  + ||||++++       ++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~-hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE-SPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhccc-ChhhhhhceeEEeeehh
Confidence            345999999999999999999999999999999998633      34577885544444  5 99987755       55


Q ss_pred             EEcCCC---------------ceeEEEecCCCCCCHHhHc----cCCCHHHH------HHHHHHHHHHHHHHHHCCCeEE
Q 025443          189 VRDQHS---------------KTPSLIFEYVNSTDFKVLY----PTLTDYDI------RYYIYELLKVMSIFIRWSTVLC  243 (252)
Q Consensus       189 ~~~~~~---------------~~~~lV~E~~~gg~L~~~l----~~l~~~~~------~~i~~qi~~aL~yLH~~~IV~~  243 (252)
                      +..++.               ..+|||||||+ |+|.+++    ..+.+...      ..++.||+.||+|||++||||.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHr  218 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHG  218 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccC
Confidence            554332               33899999999 8999999    23555555      5777999999999999999998


Q ss_pred             ee
Q 025443          244 YQ  245 (252)
Q Consensus       244 ~~  245 (252)
                      +.
T Consensus       219 Di  220 (371)
T 3q60_A          219 HF  220 (371)
T ss_dssp             TC
T ss_pred             cC
Confidence            64

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.80  E-value=1.9e-19  Score=170.97  Aligned_cols=119  Identities=19%  Similarity=0.336  Sum_probs=104.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC---CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT---NERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++.+.||+|+||.||+|.+..+   +..||+|.++...    .+.+.+|+.+|+.++ ||||+++++++.+ +.  
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~-~~--  464 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITE-NP--  464 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SS--
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEec-Cc--
Confidence            57899999999999999999998654   4679999986532    367889999999999 9999999999854 33  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +|||||||+||+|.+++    ..+++..+..++.||+.||+|||++||||.+..
T Consensus       465 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDik  518 (656)
T 2j0j_A          465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA  518 (656)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccc
Confidence            89999999999999999    258999999999999999999999999998653

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.80  E-value=6.4e-20  Score=166.05  Aligned_cols=119  Identities=12%  Similarity=0.100  Sum_probs=101.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      ..+|.+.+.||+|+||+|+. ....+++.||||++.......+.+|+.+|+.+.+|+|||++++++.+...  +||||||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~--~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQF--QYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTE--EEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCE--EEEEEEC
Confidence            45699999999999999764 34468999999999876666678999999999449999999999998865  9999999


Q ss_pred             CCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          204 VNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       204 ~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |+ |+|.+++    ..+.+..+..++.||+.||+|||++||||.+..
T Consensus       100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlK  145 (432)
T 3p23_A          100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLK  145 (432)
T ss_dssp             CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCC
Confidence            97 6999998    235666778999999999999999999998643

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.80  E-value=3.4e-19  Score=158.35  Aligned_cols=121  Identities=19%  Similarity=0.278  Sum_probs=105.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCC-----cceeeeeEEEcCCCc
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGP-----NVVKLLDIVRDQHSK  195 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~-----nIv~l~~~~~~~~~~  195 (252)
                      ..++|++.+.||+|+||.||+|.+..+++.||||+++...  .+.+.+|+.+++.++.|+     +|+++++++...+. 
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~-  130 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH-  130 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE-
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc-
Confidence            3689999999999999999999999999999999997543  456788999998886344     49999999998865 


Q ss_pred             eeEEEecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHH--HCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFI--RWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH--~~~IV~~~~~  246 (252)
                       +||||||++ |+|.+++     ..+++..++.++.||+.||.|||  ++||||++..
T Consensus       131 -~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlk  186 (382)
T 2vx3_A          131 -LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK  186 (382)
T ss_dssp             -EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCS
T ss_pred             -eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCC
Confidence             999999997 5999998     35899999999999999999999  5799998653

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.79  E-value=2.4e-19  Score=157.31  Aligned_cols=121  Identities=18%  Similarity=0.241  Sum_probs=92.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC-----ce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS-----KT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~-----~~  196 (252)
                      .++|++.+.||+|+||.||+|.+..+|..||||++....  .....+|++.+..++ |+||+++++++...+.     ..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~  100 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH-HPNIVQLQSYFYTLGERDRRDIY  100 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHC-CTTBCCEEEEEEEECSSCTTCEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcC-CCCcccHHHhhhcccccccccee
Confidence            578999999999999999999999999999999986432  456678888899999 9999999999975331     23


Q ss_pred             eEEEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHH--HCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFI--RWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH--~~~IV~~~~~  246 (252)
                      ++|||||++++ |...+       ..+++..+..++.||+.||.|||  ++||||++..
T Consensus       101 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlk  158 (360)
T 3e3p_A          101 LNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIK  158 (360)
T ss_dssp             EEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCC
T ss_pred             EEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCC
Confidence            78999999864 44333       46899999999999999999999  9999998653

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.79  E-value=1.3e-20  Score=178.30  Aligned_cols=122  Identities=20%  Similarity=0.305  Sum_probs=104.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEc----CCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRD----QHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~----~~~~  195 (252)
                      .++|++.+.||+|+||.||+|.+..+|+.||||+++...    .+.+.+|+++++.++ |+||+++++++..    ...+
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN-HPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCC-BTTBCCEEECCTTTCCCCTTS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCCCCceeeeecccccccCCC
Confidence            478999999999999999999999999999999986532    456889999999999 9999999998765    1123


Q ss_pred             eeEEEecCCCCCCHHhHcc------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          196 TPSLIFEYVNSTDFKVLYP------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l~------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ..|||||||+||+|.+++.      .+++..+..++.||+.||+|||++||||++..
T Consensus        92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLK  148 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLK  148 (676)
T ss_dssp             SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCC
T ss_pred             eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Confidence            4899999999999999991      58999999999999999999999999998654

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.73  E-value=3.1e-18  Score=160.11  Aligned_cols=111  Identities=14%  Similarity=0.031  Sum_probs=87.9

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeecc-------------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPV-------------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ....+.|++|.+..++..-.|+.+|||++...             ..+++.+|+++|+++..|+||+++++++++++.  
T Consensus       239 ~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~--  316 (569)
T 4azs_A          239 QNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQS--  316 (569)
T ss_dssp             ECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSE--
T ss_pred             hhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCE--
Confidence            35678888888888777778999999999642             135689999999999769999999999999866  


Q ss_pred             eEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|||||||+||+|.++|   +.+++.   .|+.||+.||+|||++||||-+.
T Consensus       317 ~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDI  365 (569)
T 4azs_A          317 GWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDV  365 (569)
T ss_dssp             EEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCC
T ss_pred             EEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccC
Confidence            99999999999999999   456654   58999999999999999999764

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.72  E-value=1e-17  Score=143.35  Aligned_cols=111  Identities=17%  Similarity=0.223  Sum_probs=90.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---------------------chHHHHHHHHHHHhcCCCCcc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---------------------KKKKIKREIKILQNLCGGPNV  182 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------------------~~~~~~~Ei~il~~l~~h~nI  182 (252)
                      ...|.+++.||+|+||.||+|.+ .+|+.||||+++..                     ....+.+|+.+|+.++ |   
T Consensus        89 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~---  163 (282)
T 1zar_A           89 GKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-G---  163 (282)
T ss_dssp             TSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-T---
T ss_pred             CeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-C---
Confidence            34577789999999999999999 88999999999632                     1345889999999998 5   


Q ss_pred             eeeeeEEEcCCCceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          183 VKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       183 v~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +++.+++..+ .  .|||||||+||+|.+ +.   ..+...++.||+.||.|||++||||++..
T Consensus       164 ~~v~~~~~~~-~--~~lvmE~~~g~~L~~-l~---~~~~~~i~~qi~~~l~~lH~~giiHrDlk  220 (282)
T 1zar_A          164 LAVPKVYAWE-G--NAVLMELIDAKELYR-VR---VENPDEVLDMILEEVAKFYHRGIVHGDLS  220 (282)
T ss_dssp             SSSCCEEEEE-T--TEEEEECCCCEEGGG-CC---CSCHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             CCcCeEEecc-c--eEEEEEecCCCcHHH-cc---hhhHHHHHHHHHHHHHHHHHCCCEeCCCC
Confidence            5566655443 3  799999999999998 52   23456799999999999999999998653

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.72  E-value=1.4e-17  Score=154.72  Aligned_cols=109  Identities=13%  Similarity=0.086  Sum_probs=83.9

Q ss_pred             EEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          128 EVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       128 ~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      ...+.||+|+||.||+|..  .+..+++|+.....           .+++.+|+++|++++ |+||+++..++.+.+.  
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~--  413 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVK-DFGIPAPYIFDVDLDN--  413 (540)
T ss_dssp             ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGG-GGTCCCCCEEEEETTT--
T ss_pred             CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcC-CCCcCceEEEEEeCCc--
Confidence            4467899999999999944  67889999874321           345789999999999 9999966665556655  


Q ss_pred             eEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      .|||||||+||+|.+++..     +..++.||++||+|||++||||.+..
T Consensus       414 ~~lVmE~~~ggsL~~~l~~-----~~~i~~qi~~aL~~LH~~gIiHrDiK  458 (540)
T 3en9_A          414 KRIMMSYINGKLAKDVIED-----NLDIAYKIGEIVGKLHKNDVIHNDLT  458 (540)
T ss_dssp             TEEEEECCCSEEHHHHSTT-----CTHHHHHHHHHHHHHHHTTEECTTCC
T ss_pred             cEEEEECCCCCCHHHHHHH-----HHHHHHHHHHHHHHHHHCcCccCCCC
Confidence            8999999999999999954     67999999999999999999998653

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.65  E-value=2.2e-16  Score=133.18  Aligned_cols=114  Identities=15%  Similarity=0.126  Sum_probs=90.0

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcE--EEEEEeeccc---------------------------hHHHHHHHHHHHhc
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNER--CIIKILKPVK---------------------------KKKIKREIKILQNL  176 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~--vAvK~i~~~~---------------------------~~~~~~Ei~il~~l  176 (252)
                      -|++.+.||+|+||.||+|.+..+|+.  ||||+++...                           ...+.+|+.+|..+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            478899999999999999999788999  9999975421                           12578999999999


Q ss_pred             CCCCcc--eeeeeEEEcCCCceeEEEecCCCC-C----CHHhHccCCCHHHHHHHHHHHHHHHHHHH-HCCCeEEeee
Q 025443          177 CGGPNV--VKLLDIVRDQHSKTPSLIFEYVNS-T----DFKVLYPTLTDYDIRYYIYELLKVMSIFI-RWSTVLCYQS  246 (252)
Q Consensus       177 ~~h~nI--v~l~~~~~~~~~~~~~lV~E~~~g-g----~L~~~l~~l~~~~~~~i~~qi~~aL~yLH-~~~IV~~~~~  246 (252)
                      . |++|  +..+++   . .  .+|||||+.+ |    +|.++....++.++..++.||+.||.||| ++||||++..
T Consensus       128 ~-~~~i~~p~~~~~---~-~--~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlk  198 (258)
T 1zth_A          128 K-EAGVSVPQPYTY---M-K--NVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLS  198 (258)
T ss_dssp             H-HTTCCCCCEEEE---E-T--TEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCS
T ss_pred             H-hCCCCCCeEEEc---C-C--CEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCC
Confidence            8 7754  344432   2 2  7999999942 3    77776644456678899999999999999 9999998653

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.64  E-value=4.1e-16  Score=140.07  Aligned_cols=120  Identities=13%  Similarity=0.172  Sum_probs=90.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCC-Ccce---------e---
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGG-PNVV---------K---  184 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h-~nIv---------~---  184 (252)
                      ...|+..+.||+|+||.||+|.+..+|+.||||+++..      ..+.+.+|+.+++.++ | .|+.         .   
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~-~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLR-GIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGST-TCCSHHHHHHHTCBCCCCE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhc-cCCCHHHHHHhcccccchh
Confidence            45688999999999999999999999999999999732      2567899999999997 5 2211         1   


Q ss_pred             ---------eeeEEEcCC---CceeEEEecCCCCCCHHhHcc----------CCCHHHHHHHHHHHHHHHHHHHHCCCeE
Q 025443          185 ---------LLDIVRDQH---SKTPSLIFEYVNSTDFKVLYP----------TLTDYDIRYYIYELLKVMSIFIRWSTVL  242 (252)
Q Consensus       185 ---------l~~~~~~~~---~~~~~lV~E~~~gg~L~~~l~----------~l~~~~~~~i~~qi~~aL~yLH~~~IV~  242 (252)
                               +.+++....   ...++++|+++. |+|.+++.          .+++..+..++.||+.||+|||++||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiH  234 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  234 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECCS-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehhc-CCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence                     111111111   123788888774 89998881          2677788899999999999999999999


Q ss_pred             Eee
Q 025443          243 CYQ  245 (252)
Q Consensus       243 ~~~  245 (252)
                      .+.
T Consensus       235 rDi  237 (413)
T 3dzo_A          235 TYL  237 (413)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            865

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.51  E-value=5.3e-15  Score=131.52  Aligned_cols=111  Identities=12%  Similarity=0.184  Sum_probs=80.7

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----------------hHH--------HHHHHHHHHhcCCCC
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----------------KKK--------IKREIKILQNLCGGP  180 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------------~~~--------~~~Ei~il~~l~~h~  180 (252)
                      -|.+++.||+|+||.||+|.+ .+|+.||||+++...                 ...        ..+|...|.++. +.
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~-~~  173 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY-EE  173 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred             EEEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH-hc
Confidence            499999999999999999998 469999999985310                 011        235666676665 44


Q ss_pred             cceeeeeEEEcCCCceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          181 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       181 nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++... ..+....   .+|||||++|++|.++..   .++...++.||+.+|.|||++||||++.
T Consensus       174 gv~vp-~p~~~~~---~~LVME~i~G~~L~~l~~---~~~~~~l~~qll~~l~~lH~~gIVHrDL  231 (397)
T 4gyi_A          174 GFPVP-EPIAQSR---HTIVMSLVDALPMRQVSS---VPDPASLYADLIALILRLAKHGLIHGDF  231 (397)
T ss_dssp             TCSCC-CEEEEET---TEEEEECCSCEEGGGCCC---CSCHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             CCCCC-eeeeccC---ceEEEEecCCccHhhhcc---cHHHHHHHHHHHHHHHHHHHCCCcCCCC
Confidence            33221 2222222   479999999999887652   2345678999999999999999999864

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.97  E-value=3.5e-09  Score=88.47  Aligned_cols=108  Identities=17%  Similarity=0.206  Sum_probs=88.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec---cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP---VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~---~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .+.|++...+|.|+++.||++..  .+..+++|+...   .....+.+|+.+++.+.++..++++++++.+.+.  .|+|
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~--~~lv   88 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW--SNLL   88 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE--EEEE
T ss_pred             hccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCc--eEEE
Confidence            35688888999999999999975  467899999875   3345689999999999757788899999887754  8999


Q ss_pred             ecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHH
Q 025443          201 FEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIR  237 (252)
Q Consensus       201 ~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~  237 (252)
                      |||++|.+|.+.+.  +..+...++.+++++|..||+
T Consensus        89 ~e~i~G~~l~~~~~--~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           89 MSEADGVLCSEEYE--DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             EECCSSEEHHHHCC--TTTCHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCeehhhccC--CcccHHHHHHHHHHHHHHHhC
Confidence            99999999988752  223345789999999999999

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.50  E-value=6.8e-07  Score=78.08  Aligned_cols=108  Identities=17%  Similarity=0.274  Sum_probs=82.7

Q ss_pred             EEeEeeecCceEEEEEEEcCCCcEEEEEEee--ccc----hHHHHHHHHHHHhcCC-CCcceeeeeEEEcCCC-ceeEEE
Q 025443          129 VVRKVGRGKYSEVFEGINVNTNERCIIKILK--PVK----KKKIKREIKILQNLCG-GPNVVKLLDIVRDQHS-KTPSLI  200 (252)
Q Consensus       129 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~--~~~----~~~~~~Ei~il~~l~~-h~nIv~l~~~~~~~~~-~~~~lV  200 (252)
                      .++.|+.|.++.||++..  .+..+++|+..  ...    ...+.+|+.+++.|.+ +..+++++.++.+... +..|+|
T Consensus        42 ~~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             EEEECCC-CCSCEEEEEC--SSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             eEEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            467899999999999876  34678899876  322    3568899999999983 3457888888876521 237999


Q ss_pred             ecCCCCCCHHh-HccCCCHHHHHHHHHHHHHHHHHHHHC
Q 025443          201 FEYVNSTDFKV-LYPTLTDYDIRYYIYELLKVMSIFIRW  238 (252)
Q Consensus       201 ~E~~~gg~L~~-~l~~l~~~~~~~i~~qi~~aL~yLH~~  238 (252)
                      |||++|..+.+ .+..+++.+...++.+++..|..||+.
T Consensus       120 me~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~  158 (359)
T 3dxp_A          120 MEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTV  158 (359)
T ss_dssp             EECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCC
Confidence            99999988854 346788999999999999999999984

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.50  E-value=6.9e-07  Score=73.73  Aligned_cols=107  Identities=14%  Similarity=0.071  Sum_probs=80.0

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCC-cceeeeeEEEcCCCceeEEEecC
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGP-NVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~-nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      ..|.+....+.|..+.||++.. .+|..+++|+........+.+|+.+++.+..+. .+++++++....+.  .++||||
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~--~~~v~e~   96 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGR--DWLLLGE   96 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSC--EEEEEEC
T ss_pred             CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCC--CEEEEEe
Confidence            4566644444666699999965 567789999987654566889999999997342 26678888887755  8999999


Q ss_pred             CCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCC
Q 025443          204 VNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWS  239 (252)
Q Consensus       204 ~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~  239 (252)
                      ++|.+|.  .....   ...++.+++..|..||+..
T Consensus        97 i~G~~l~--~~~~~---~~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A           97 VPGQDLL--SSHLA---PAEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             CSSEETT--TSCCC---HHHHHHHHHHHHHHHTTSC
T ss_pred             cCCcccC--cCcCC---HhHHHHHHHHHHHHHhCCC
Confidence            9998884  32222   2368899999999999865

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.91  E-value=0.00013  Score=62.32  Aligned_cols=105  Identities=17%  Similarity=0.197  Sum_probs=81.2

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCC--cceeeeeEEEcCCCceeEEEecCCCC
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGP--NVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~--nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      ++.++.|....||+.     |..+++|+.... ....+.+|+.+|+.|..+-  .+++.+.+..... +..|+||||++|
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~-g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD-GNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT-SCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC-CceEEEEeccCC
Confidence            356788988999988     466888986432 2467889999999998432  3667777765322 337899999999


Q ss_pred             CCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          207 TDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       207 g~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      ..|.+.. ..++..+...++.|+...|.-||+...
T Consensus        98 ~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~  132 (306)
T 3tdw_A           98 QILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPV  132 (306)
T ss_dssp             EECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             eECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence            9887743 778899999999999999999999754

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.89  E-value=8.6e-05  Score=61.70  Aligned_cols=106  Identities=8%  Similarity=0.008  Sum_probs=82.7

Q ss_pred             EeeecCce-EEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCCHH
Q 025443          132 KVGRGKYS-EVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFK  210 (252)
Q Consensus       132 ~lG~G~fg-~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~  210 (252)
                      .+..|..| .||+......+..+.+|+-.......+.+|..+|+.+..+--+++++.++.+.+.  .|+|||+++|.++.
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~--~~lvme~l~G~~~~  108 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDD--AWLLTTAIPGKTAF  108 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTE--EEEEEECCCSEEHH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCe--EEEEEEeeCCcccc
Confidence            34445544 6999887777788999998776667789999999999866667889998888765  89999999998888


Q ss_pred             hHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          211 VLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       211 ~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      +.... .......+..++...|.-||+...
T Consensus       109 ~~~~~-~~~~~~~~~~~l~~~L~~Lh~~~~  137 (272)
T 4gkh_A          109 QVLEE-YPDSGENIVDALAVFLRRLHSIPV  137 (272)
T ss_dssp             HHHHH-CGGGHHHHHHHHHHHHHHHHTSCG
T ss_pred             ccccC-CHHHHHHHHHHHHHHHHHhcCCCc
Confidence            77622 223445788999999999998643

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.80  E-value=9.5e-05  Score=63.62  Aligned_cols=97  Identities=16%  Similarity=0.126  Sum_probs=76.7

Q ss_pred             EEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCC--CCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          129 VVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCG--GPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       129 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~--h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      -.+.|+.|.+..+|+...  ++..+++|+........+..|...|+.|..  ...+++.+.+....+.  .++||||++|
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~--~~lvme~l~G  115 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGH--SFLLLEALNK  115 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSE--EEEEEECCCC
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCc--eEEEEEeccC
Confidence            356799999999999875  467788998876666778999999998863  3568889888877644  8999999998


Q ss_pred             CCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          207 TDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       207 g~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      ..+..           ....++.+.|+-||+.+.
T Consensus       116 ~~~~~-----------~~~~~lG~~LA~LH~~~~  138 (312)
T 3jr1_A          116 SKNKQ-----------SSFTIFAEKIAQLHQIQG  138 (312)
T ss_dssp             CCCCT-----------THHHHHHHHHHHHHHCCC
T ss_pred             CCCCc-----------hhHHHHHHHHHHHHcCCC
Confidence            76421           356788899999999764

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.69  E-value=0.00013  Score=62.07  Aligned_cols=105  Identities=13%  Similarity=0.116  Sum_probs=77.7

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCc--ceeeeeEEEcCCC-ceeEEEecCCCC
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPN--VVKLLDIVRDQHS-KTPSLIFEYVNS  206 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~n--Iv~l~~~~~~~~~-~~~~lV~E~~~g  206 (252)
                      +.++.|.+..||++.     ..+++|+.... ....+.+|+.+|+.+..+..  +++.+......+. ...|+|||+++|
T Consensus        26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G  100 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG  100 (304)
T ss_dssp             CEEEECSSEEEEEST-----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred             EecCCCCcceEEEEC-----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence            458999999999863     45889986543 24678899999999853433  3455444333221 125899999999


Q ss_pred             CCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          207 TDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       207 g~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      .+|.+.. ..++..+...++.|++..|..||+...
T Consensus       101 ~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~  135 (304)
T 3sg8_A          101 VPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINI  135 (304)
T ss_dssp             EECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             eECCccccccCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence            8887544 778999999999999999999998643

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.50  E-value=0.00025  Score=61.48  Aligned_cols=113  Identities=11%  Similarity=0.099  Sum_probs=82.3

Q ss_pred             EEEeEe-eecCceEEEEEEEc--C----CCcEEEEEEeeccc------hHHHHHHHHHHHhcCCC--CcceeeeeEEEcC
Q 025443          128 EVVRKV-GRGKYSEVFEGINV--N----TNERCIIKILKPVK------KKKIKREIKILQNLCGG--PNVVKLLDIVRDQ  192 (252)
Q Consensus       128 ~~~~~l-G~G~fg~V~~~~~~--~----~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h--~nIv~l~~~~~~~  192 (252)
                      ...+.| +.|..+.+|+....  .    ++..+++|+.....      ...+.+|+.+|+.|..+  -.+++++.+..+.
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~  102 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG  102 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC
Confidence            345678 88888999988653  0    15678999875432      25678999999998743  3577888877654


Q ss_pred             CC-ceeEEEecCCCCCCHHhHc---------cCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          193 HS-KTPSLIFEYVNSTDFKVLY---------PTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       193 ~~-~~~~lV~E~~~gg~L~~~l---------~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      .. +..|+||||++|..+.+.+         ..++..+...++.++.+.|.-||+...
T Consensus       103 ~~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~  160 (357)
T 3ats_A          103 DVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPN  160 (357)
T ss_dssp             TTTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             CccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence            20 2368999999998877542         146777778899999999999998653

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.27  E-value=0.001  Score=58.53  Aligned_cols=99  Identities=14%  Similarity=0.125  Sum_probs=63.2

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeecc----------chHHHHHHHHHHHhcCCC-C-cceeeeeEEEcCCCcee
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPV----------KKKKIKREIKILQNLCGG-P-NVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----------~~~~~~~Ei~il~~l~~h-~-nIv~l~~~~~~~~~~~~  197 (252)
                      .+.||.|.++.||++....+++.+++|...+.          ...++..|.++|+.+... + .+++++.+  +.+.  .
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~--~  110 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEM--A  110 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTT--T
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCc--c
Confidence            56899999999999976556788999986431          134568899999988532 2 34566644  3333  6


Q ss_pred             EEEecCCCCCC-HHhHc--cCCCHHHHHHHHHHHHHHHHHHH
Q 025443          198 SLIFEYVNSTD-FKVLY--PTLTDYDIRYYIYELLKVMSIFI  236 (252)
Q Consensus       198 ~lV~E~~~gg~-L~~~l--~~l~~~~~~~i~~qi~~aL~yLH  236 (252)
                      +||||+++|.. +...+  +....    .++.++...|.-+|
T Consensus       111 ~lvmE~l~g~~~~~~~l~~~~~~~----~~~~~l~~~La~lH  148 (397)
T 2olc_A          111 VTVMEDLSHLKIARKGLIEGENYP----HLSQHIGEFLGKTL  148 (397)
T ss_dssp             EEEECCCTTSEEHHHHHHTTCCCT----THHHHHHHHHHHHH
T ss_pred             EEEEEeCCCcchHHHHHhcCCcCH----HHHHHHHHHHHHHh
Confidence            89999998643 33333  11111    24567777777777

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.97  E-value=0.011  Score=49.38  Aligned_cols=98  Identities=12%  Similarity=0.047  Sum_probs=69.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCC--CcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGG--PNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h--~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ....-+..+|.|..+.||+... .+|+.|.+|+.....   ...+..|+..|+.|...  --+++.+.+   +.   -++
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~---~~---~~l   87 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW---DD---RTL   87 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---ET---TEE
T ss_pred             CCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec---cC---ceE
Confidence            4566678999999999999976 678899999865432   34678999999998633  234555543   22   478


Q ss_pred             EecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          200 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       200 V~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      ||||++++..       +..    ...++...|.-||..+.
T Consensus        88 v~e~l~~~~~-------~~~----~~~~lg~~La~lH~~~~  117 (288)
T 3f7w_A           88 AMEWVDERPP-------TPE----AAERFGHQLAAMHLAGA  117 (288)
T ss_dssp             EEECCCCCCC-------CHH----HHHHHHHHHHHHHHTCC
T ss_pred             EEEeecccCC-------ChH----HHHHHHHHHHhhhhccc
Confidence            9999986543       222    23456777888998653

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.02  E-value=0.029  Score=47.51  Aligned_cols=96  Identities=13%  Similarity=0.136  Sum_probs=58.5

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCC-Ccceeeee------EEEcCCCceeEEEec
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGG-PNVVKLLD------IVRDQHSKTPSLIFE  202 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h-~nIv~l~~------~~~~~~~~~~~lV~E  202 (252)
                      ++.|+.|..+.||++..  .+..+++|+.... ...+..|+.+++.|..+ -.+++++.      +....+  ..++|||
T Consensus        37 ~~~l~gG~~n~~~~v~~--~~~~~vlk~~~~~-~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~--~~~~l~~  111 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHT--DSGAVCLKRIHRP-EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGS--FLFVVYD  111 (346)
T ss_dssp             EEECC----CEEEEEEE--TTEEEEEEEECSC-HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETT--EEEEEEE
T ss_pred             eeeccccccCcEEEEEe--CCCCEEEEecCCC-HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECC--EEEEEEE
Confidence            35677778899999876  3345899998753 34555677777766521 13444443      122333  3899999


Q ss_pred             CCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHC
Q 025443          203 YVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRW  238 (252)
Q Consensus       203 ~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~  238 (252)
                      |++|..+..    .+.    ..+.+++..|.-||+.
T Consensus       112 ~i~G~~~~~----~~~----~~~~~~g~~La~lH~~  139 (346)
T 2q83_A          112 WIEGRPFEL----TVK----QDLEFIMKGLADFHTA  139 (346)
T ss_dssp             CCCCBCCCT----TSH----HHHHHHHHHHHHHHHH
T ss_pred             eecCccCCC----CCH----HHHHHHHHHHHHHHHh
Confidence            999876541    122    2357888888889974

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=95.11  E-value=0.047  Score=48.70  Aligned_cols=101  Identities=12%  Similarity=0.127  Sum_probs=68.9

Q ss_pred             EEeEeeecCceEEEEEEEcC-------CCcEEEEEEeeccch-HHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          129 VVRKVGRGKYSEVFEGINVN-------TNERCIIKILKPVKK-KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       129 ~~~~lG~G~fg~V~~~~~~~-------~~~~vAvK~i~~~~~-~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++.|+.|....||++....       .+..+.+|+...... ..+.+|..+++.|.++.-.+++++.+.  +    .+|
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~----g~v  150 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFS--G----GRL  150 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T----EEE
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C----CEE
Confidence            35678889899999998742       257899998854223 567789999999873333366776542  2    389


Q ss_pred             ecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          201 FEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       201 ~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      |||++|..|...  .+.   -..++.++++.|.-||+..+
T Consensus       151 ~e~l~G~~l~~~--~l~---~~~~~~~ia~~La~LH~~~~  185 (429)
T 1nw1_A          151 EEYIPSRPLSCH--EIS---LAHMSTKIAKRVAKVHQLEV  185 (429)
T ss_dssp             ECCCCEEECCTT--GGG---SHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEeCCcccChh--hcC---CHHHHHHHHHHHHHHhCCcc
Confidence            999987554321  111   12467889999999998654

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=94.58  E-value=0.15  Score=45.88  Aligned_cols=101  Identities=12%  Similarity=0.143  Sum_probs=66.6

Q ss_pred             EEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCC
Q 025443          129 VVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNS  206 (252)
Q Consensus       129 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~g  206 (252)
                      .++.|+.|....+|++.....+..+.+|+.....  .-...+|..++..|..+.-.+++++.+  .+    .+||||++|
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~--~~----G~v~e~I~G  185 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF--TN----GRIEEFMDG  185 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE--TT----EEEEECCCS
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe--CC----eEEEEeeCC
Confidence            3567888999999999874435788899875322  111258999999998433346777776  22    259999997


Q ss_pred             CCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          207 TDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       207 g~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      ..|..  ..+..   ..++.+|++.|.-||+..+
T Consensus       186 ~~l~~--~~l~~---~~~~~~ia~~La~LH~~~~  214 (458)
T 2qg7_A          186 YALSR--EDIKN---PKFQKLIAKNLKLLHDIKL  214 (458)
T ss_dssp             EECCT--TTTTS---HHHHHHHHHHHHHHHTCCC
T ss_pred             ccCCh--hhcCC---HHHHHHHHHHHHHHhcCCc
Confidence            55432  11211   2467889999999998765

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=94.54  E-value=0.067  Score=46.98  Aligned_cols=99  Identities=12%  Similarity=0.140  Sum_probs=62.7

Q ss_pred             eEeeecCceEEEEEEEcC-------CCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          131 RKVGRGKYSEVFEGINVN-------TNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~-------~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      +.|..|....+|++....       .+..+.+|+....  ....+.+|..+++.|.++.-.+++++.+.+      .+||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~------g~v~  129 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE------GRLE  129 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT------EEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC------ccEE
Confidence            567778888899987632       3477899986332  345567999999988744334567665432      2899


Q ss_pred             cCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          202 EYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       202 E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      ||++|..|..-  .+..   ..+..++++.|+-||+..+
T Consensus       130 e~i~G~~l~~~--~l~~---p~~~~~ia~~La~LH~~~~  163 (379)
T 3feg_A          130 QYIPSRPLKTQ--ELRE---PVLSAAIATKMAQFHGMEM  163 (379)
T ss_dssp             ECCSEEECCGG--GGGC---HHHHHHHHHHHHHHHTCCC
T ss_pred             EEecCccCChh--HhCC---HHHHHHHHHHHHHHhCCCC
Confidence            99998555321  1111   2467889999999998765

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=94.51  E-value=0.16  Score=44.72  Aligned_cols=101  Identities=13%  Similarity=0.161  Sum_probs=60.8

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEee-------cc---chHHHHHHHHHHHhcC--CCCcceeeeeEEEcCCCcee
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILK-------PV---KKKKIKREIKILQNLC--GGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~-------~~---~~~~~~~Ei~il~~l~--~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ++.||.|..+.||++..  ++..++||...       ..   ...+...|.+++..+.  ....+++++.+.  .+.  .
T Consensus        39 i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~--~  112 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTM--A  112 (420)
T ss_dssp             EEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTT--T
T ss_pred             EEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCc--c
Confidence            56789999999999954  56789999321       11   0122333444443322  135677777765  333  7


Q ss_pred             EEEecCC-CC-CCHHhHc-cCCCHHHHHHHHHHHHHHHHHHHHCC
Q 025443          198 SLIFEYV-NS-TDFKVLY-PTLTDYDIRYYIYELLKVMSIFIRWS  239 (252)
Q Consensus       198 ~lV~E~~-~g-g~L~~~l-~~l~~~~~~~i~~qi~~aL~yLH~~~  239 (252)
                      ++||||+ +| ..+.+.+ .....   ...+.++...|.-||...
T Consensus       113 ~lv~e~l~~g~~~l~~~l~~~~~~---~~~~~~lg~~La~lH~~~  154 (420)
T 2pyw_A          113 LIGMRYLEPPHIILRKGLIAGIEY---PFLADHMSDYMAKTLFFT  154 (420)
T ss_dssp             EEEECCCCTTCEEHHHHHHHTCCC---TTHHHHHHHHHHHHHHTT
T ss_pred             EEEEeecCCcchhHHHHHhcCCCC---HHHHHHHHHHHHHHHHhc
Confidence            9999999 86 3343333 11111   135677888888888754

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=94.46  E-value=0.13  Score=43.21  Aligned_cols=100  Identities=10%  Similarity=0.072  Sum_probs=62.8

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCC-cceeeeeE------EEcCCCceeE
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGP-NVVKLLDI------VRDQHSKTPS  198 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~-nIv~l~~~------~~~~~~~~~~  198 (252)
                      ..-++.|+.|....+|+... .+| .+++|+.... ....+..|+.++..|..+. .+++++..      ....  +..+
T Consensus        24 ~~~~~~i~~G~~n~~~~v~~-~~g-~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~--g~~~   99 (322)
T 2ppq_A           24 LTSYKGIAEGVENSNFLLHT-TKD-PLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELS--GRPA   99 (322)
T ss_dssp             EEEEEEECC---EEEEEEEE-SSC-CEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEET--TEEE
T ss_pred             ceEeeccCCCcccceEEEEe-CCc-cEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEEC--CEEE
Confidence            34467788898899999876 334 6889998762 3456778999988886321 13444421      1122  2378


Q ss_pred             EEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHC
Q 025443          199 LIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRW  238 (252)
Q Consensus       199 lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~  238 (252)
                      ++|||++|..+..    .+    ...+.++.+.|.-||..
T Consensus       100 ~l~~~l~G~~~~~----~~----~~~~~~~g~~La~lH~~  131 (322)
T 2ppq_A          100 ALISFLEGMWLRK----PE----AKHCREVGKALAAMHLA  131 (322)
T ss_dssp             EEEECCCCBCCSS----CC----HHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCcCCCC----CC----HHHHHHHHHHHHHHHHH
Confidence            9999999866532    22    24567888888889974

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=93.97  E-value=0.087  Score=44.78  Aligned_cols=104  Identities=9%  Similarity=-0.003  Sum_probs=60.6

Q ss_pred             eEeeecCceE-EEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCC-CcceeeeeEEEcCCCceeEEEecCCCCCC
Q 025443          131 RKVGRGKYSE-VFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGG-PNVVKLLDIVRDQHSKTPSLIFEYVNSTD  208 (252)
Q Consensus       131 ~~lG~G~fg~-V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h-~nIv~l~~~~~~~~~~~~~lV~E~~~gg~  208 (252)
                      +.|+.|+... +|+... .++..+++|.........+..|+.+++.+.++ -.+++++.+.  ...  -++|||++++..
T Consensus        24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~~~~~~~e~~~l~~L~~~g~~vP~v~~~d--~~~--g~ll~e~l~~~~   98 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEEGGDTQPFVDLAQYLRNLDISAPEIYAEE--HAR--GLLLIEDLGDAL   98 (333)
T ss_dssp             CC--------CCEEEEC-TTCCEEEEEECCTTTTCCSHHHHHHHHHHHHTTCBCCCEEEEE--TTT--TEEEECCCCSCB
T ss_pred             eECCCCCCCceEEEEEc-CCCCeEEEEECCCCCCccccHHHHHHHHHHhCCCCCCceeeec--CCC--CEEEEeeCCCcc
Confidence            4565554444 556543 23566777765543224566788888888632 2356677653  222  368999998878


Q ss_pred             HHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          209 FKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       209 L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      +.+++...+... ...+.+++..|.-||....
T Consensus        99 l~~~l~~~~~~~-~~~~~~~~~~La~lH~~~~  129 (333)
T 3csv_A           99 FTEVINNDPAQE-MPLYRAAVDLLIHLHDAQT  129 (333)
T ss_dssp             HHHHHHHCGGGH-HHHHHHHHHHHHHHHTSCC
T ss_pred             hHHHhcCCCccH-HHHHHHHHHHHHHHhcCCC
Confidence            877762211111 4678889999999998654

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=93.37  E-value=0.24  Score=41.75  Aligned_cols=96  Identities=13%  Similarity=0.142  Sum_probs=62.8

Q ss_pred             eEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCC-CcceeeeeE-----EEcCCCceeEEEec
Q 025443          131 RKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGG-PNVVKLLDI-----VRDQHSKTPSLIFE  202 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h-~nIv~l~~~-----~~~~~~~~~~lV~E  202 (252)
                      ..++ |....||++.. .+|+.+++|+.+..  ....+..|..+++.|.++ -.+++++..     ....  +..++|||
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~--g~~~~l~~  107 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQ--GFYFAVFP  107 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEET--TEEEEEEE
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEEC--CEEEEEEE
Confidence            3456 77789998755 35667999998743  356778899999888622 124555543     1122  23688999


Q ss_pred             CCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHC
Q 025443          203 YVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRW  238 (252)
Q Consensus       203 ~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~  238 (252)
                      |++|..+.    ..+.    ..+.++...|.-||..
T Consensus       108 ~i~G~~~~----~~~~----~~~~~~g~~La~lH~~  135 (328)
T 1zyl_A          108 SVGGRQFE----ADNI----DQMEAVGRYLGRMHQT  135 (328)
T ss_dssp             CCCCEECC----SSCH----HHHHHHHHHHHHHHHH
T ss_pred             ecCCCCCC----CCCH----HHHHHHHHHHHHHHHh
Confidence            99976543    1222    3467788888888874

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=93.08  E-value=0.33  Score=40.56  Aligned_cols=94  Identities=7%  Similarity=-0.019  Sum_probs=62.8

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecCC-CC
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYV-NS  206 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~-~g  206 (252)
                      ++.|+.|....+|++      ..+++|+.....  .-...+|+.+++.+.++.-.++++.+.  .+.  -++|+||+ +|
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~--~~~v~e~i~~g   92 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVD--PAT--GVMVTRYIAGA   92 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTT--CCEEEECCTTC
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEE--CCC--CEEEEeecCCC
Confidence            578999999999998      458888875432  112357998888886332224666543  322  46899999 66


Q ss_pred             CCHHhHccCCCHHHHH---HHHHHHHHHHHHHHHCCC
Q 025443          207 TDFKVLYPTLTDYDIR---YYIYELLKVMSIFIRWST  240 (252)
Q Consensus       207 g~L~~~l~~l~~~~~~---~i~~qi~~aL~yLH~~~I  240 (252)
                      .+|.       .....   .++.++++.|.-||+.+.
T Consensus        93 ~~l~-------~~~~~~~~~~~~~~~~~La~lH~~~~  122 (301)
T 3dxq_A           93 QTMS-------PEKFKTRPGSPARAGEAFRKLHGSGA  122 (301)
T ss_dssp             EECC-------HHHHHHSTTHHHHHHHHHHHHHTSCC
T ss_pred             ccCC-------HhhHhhhHHHHHHHHHHHHHHhCCCC
Confidence            4442       22332   378899999999999764

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=90.73  E-value=0.5  Score=40.68  Aligned_cols=98  Identities=14%  Similarity=0.168  Sum_probs=59.8

Q ss_pred             EeEeeecCceEEEEEEEcC--------CCcEEEEEEeeccch--HHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          130 VRKVGRGKYSEVFEGINVN--------TNERCIIKILKPVKK--KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~--------~~~~vAvK~i~~~~~--~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .+.|+.|....+|++....        .+..+++|+......  .....|..+++.+..+.-.+++++.+  .    -++
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~----~~~  111 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N----GGR  111 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T----TEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C----CcE
Confidence            4678888889999998643        126788888754221  12468999999887332245676544  2    368


Q ss_pred             EecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHC
Q 025443          200 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRW  238 (252)
Q Consensus       200 V~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~  238 (252)
                      ||||++|..+...-  +.   -...+.++++.|.-||+.
T Consensus       112 v~e~i~G~~l~~~~--~~---~~~~~~~~a~~La~lH~~  145 (369)
T 3c5i_A          112 IEEWLYGDPLRIDD--LK---NPTILIGIANVLGKFHTL  145 (369)
T ss_dssp             EEECCCSEECCGGG--GG---CHHHHHHHHHHHHHHHTH
T ss_pred             EEEEecCCcCChhh--cC---ChHHHHHHHHHHHHHHcC
Confidence            99999975542210  11   023567888889999963

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=89.62  E-value=0.025  Score=51.10  Aligned_cols=58  Identities=12%  Similarity=0.110  Sum_probs=18.0

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEE------EEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEc
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCII------KILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRD  191 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAv------K~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~  191 (252)
                      .+.||   ||.||++........||+      |..+..     ....+.+|..+++.++ |+|+++.+++-..
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~-H~niv~~h~f~~~  215 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQ-IPKYEKIHNFKVH  215 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCcccccccccccccccccccccccccccc-ccccCCCcceEEe
Confidence            45566   999999998665568888      766532     2345788999999998 9999999987753

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=88.77  E-value=0.91  Score=40.34  Aligned_cols=100  Identities=16%  Similarity=0.141  Sum_probs=65.3

Q ss_pred             EeEeeecCceEEEEEEEcCC-------CcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          130 VRKVGRGKYSEVFEGINVNT-------NERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~-------~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      ++.+..|....+|++.....       +..+.+++.....  .-...+|..+++.+.+..-.+++++.+  .    -++|
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~----~~~I  148 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P----EGRI  148 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T----TEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C----CCEE
Confidence            46777788899999987421       5778999864422  122468999999887333345666532  2    3689


Q ss_pred             ecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          201 FEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       201 ~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      |||++|..|..-  .+..   ..++.++++.|.-||+..+
T Consensus       149 ~efI~G~~l~~~--~l~~---~~~~~~ia~~La~LH~~~~  183 (424)
T 3mes_A          149 EEFIDGEPLTTK--QLQL---THICVEVAKNMGSLHIINS  183 (424)
T ss_dssp             EECCCSEECCTG--GGGS---HHHHHHHHHHHHHHHTHHH
T ss_pred             EEEeCCccCChh--hcCC---HHHHHHHHHHHHHHhcCch
Confidence            999998554221  1111   2477889999999997543

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=84.38  E-value=7.6  Score=32.85  Aligned_cols=94  Identities=12%  Similarity=0.149  Sum_probs=60.4

Q ss_pred             eecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCC--CcceeeeeE------EEcCCCceeEEEecCCC
Q 025443          134 GRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGG--PNVVKLLDI------VRDQHSKTPSLIFEYVN  205 (252)
Q Consensus       134 G~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h--~nIv~l~~~------~~~~~~~~~~lV~E~~~  205 (252)
                      |.|....||+... .+| .+++|+......   ..|+.+++.|..+  +++++.+..      ....  +..++||||++
T Consensus        32 G~g~~N~vy~v~~-~~g-~~vLK~~~~~~~---~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~--g~~~~l~~~i~  104 (339)
T 3i1a_A           32 GADTNAFAYQADS-ESK-SYFIKLKYGYHD---EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLK--HFKIIAYPFIH  104 (339)
T ss_dssp             TSCSSCEEEEEEC-SSC-EEEEEEEECSSC---CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECS--SEEEEEEECCC
T ss_pred             cCccccceEEEEe-CCC-CEEEEEecCccc---hHHHHHHHHHHhcCCcccccceecCCCCEEEEEC--CEEEEEEeccC
Confidence            3444678999875 345 899998865442   4677777777522  224555432      1223  34899999999


Q ss_pred             CCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          206 STDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       206 gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      |..+..  ..++..+    +.++...|.-||+...
T Consensus       105 G~~~~~--~~~~~~~----~~~lg~~La~LH~~~~  133 (339)
T 3i1a_A          105 APNGFT--QNLTGKQ----WKQLGKVLRQIHETSV  133 (339)
T ss_dssp             CCBTTT--SCCCHHH----HHHHHHHHHHHHTCCC
T ss_pred             CCcCcc--cCCCHHH----HHHHHHHHHHHhCcCC
Confidence            877632  2344433    4678889999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	252
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-47
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-17
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-17
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-17
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-17
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-16
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-16
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-16
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-15
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-15
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-15
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	6e-15
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-14
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-14
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-14
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-14
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-14
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-14
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	6e-14
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	9e-14
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-13
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-13
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-13
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-13
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-12
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-12
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-12
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-11
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-11
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-11
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-11
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-11
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-11
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-11
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-11
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-11
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-11
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	7e-11
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-10
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-10
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-10
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	6e-10
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-09
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-09
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-09
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-08
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-08
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-08
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-08
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-08
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-07
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-06

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  158 bits (400), Expect = 1e-47
 Identities = 99/142 (69%), Positives = 123/142 (86%)

Query: 92  PAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNE 151
           P  S+ARVYTDVN  RP+EYWDYES  V+WG+QDDY++VRK+GRGKYSEVFE IN+  NE
Sbjct: 2   PVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 61

Query: 152 RCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           + ++KILKPVKKKKIKREIKIL+NL GGPN++ L DIV+D  S+TP+L+FE+VN+TDFK 
Sbjct: 62  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 121

Query: 212 LYPTLTDYDIRYYIYELLKVMS 233
           LY TLTDYDIR+Y+YE+LK + 
Sbjct: 122 LYQTLTDYDIRFYMYEILKALD 143

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.7 bits (191), Expect = 1e-17
 Identities = 27/127 (21%), Positives = 60/127 (47%), Gaps = 10/127 (7%)

Query: 114 YESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK---REI 170
           YE +T     +D +E++ ++G G + +V++  N  T+     K++    +++++    EI
Sbjct: 1   YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 60

Query: 171 KILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP----TLTDYDIRYYIY 226
            IL +    PN+VKLLD    +++    ++ E+        +       LT+  I+    
Sbjct: 61  DILASCD-HPNIVKLLDAFYYENN--LWILIEFCAGGAVDAVMLELERPLTESQIQVVCK 117

Query: 227 ELLKVMS 233
           + L  ++
Sbjct: 118 QTLDALN 124

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 2e-17
 Identities = 23/117 (19%), Positives = 56/117 (47%), Gaps = 10/117 (8%)

Query: 125 DDYEVVRKV-GRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVV 183
           DDY+V  +V G G   +V +  N  T E+  +K+L+     K +RE+++       P++V
Sbjct: 11  DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKARREVELHWRASQCPHIV 68

Query: 184 KLLDIVRDQHS--KTPSLIFEYVNSTD-FKVLY----PTLTDYDIRYYIYELLKVMS 233
           +++D+  + ++  K   ++ E ++  + F  +        T+ +    +  + + + 
Sbjct: 69  RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 125

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 77.0 bits (189), Expect = 4e-17
 Identities = 22/115 (19%), Positives = 51/115 (44%), Gaps = 10/115 (8%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK---PVKKKKIKREIKILQNLCGGPN 181
           D Y+++ ++G G +  V   +   T    + K +    P+ K  +K EI I+  L   P 
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPK 87

Query: 182 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVM 232
           ++ L D   D++     LI E+++  +           +++ ++  Y+ +  + +
Sbjct: 88  LINLHDAFEDKYE--MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGL 140

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 4e-17
 Identities = 28/132 (21%), Positives = 61/132 (46%), Gaps = 11/132 (8%)

Query: 111 YWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-----PVKKKK 165
           ++  E     W  +  Y  ++ VG G Y  V   ++  T  +  IK L       +  K+
Sbjct: 4   FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63

Query: 166 IKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS----LIFEYVNSTDFKVL-YPTLTDYD 220
             RE+++L+++    NV+ LLD+     +        L+  ++ +   K++ +  L +  
Sbjct: 64  AYRELRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR 122

Query: 221 IRYYIYELLKVM 232
           I++ +Y++LK +
Sbjct: 123 IQFLVYQMLKGL 134

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 74.3 bits (182), Expect = 3e-16
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 10/125 (8%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP----VKKKKIKREIKILQNLCGG 179
           +D Y+    +G G +SEV    +  T +   IK +       K+  ++ EI +L  +   
Sbjct: 8   RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-KH 66

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLY--PTLTDYDIRYYIYELLKVMSIFI 236
           PN+V L DI          LI + V+  + F  +      T+ D    I+++L  +    
Sbjct: 67  PNIVALDDIYESG--GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 124

Query: 237 RWSTV 241
               V
Sbjct: 125 DLGIV 129

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 3e-16
 Identities = 18/116 (15%), Positives = 45/116 (38%), Gaps = 10/116 (8%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK----PVKKKKIKREIKILQNLCGGP 180
           DD+E + ++G G    VF+  +  +      K++     P  + +I RE+++L      P
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SP 64

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKVMS 233
            +V              S+  E+++      +      + +  +      ++K ++
Sbjct: 65  YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.2 bits (181), Expect = 4e-16
 Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 12/136 (8%)

Query: 107 RPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-----PV 161
           RP  ++  E     W   + Y+ +  VG G Y  V    +  T  R  +K L       +
Sbjct: 1   RP-TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 59

Query: 162 KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS---KTPSLIFEYVNSTDFKVLY--PTL 216
             K+  RE+++L+++    NV+ LLD+     S        +  ++   D   +     L
Sbjct: 60  HAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118

Query: 217 TDYDIRYYIYELLKVM 232
           TD  +++ IY++L+ +
Sbjct: 119 TDDHVQFLIYQILRGL 134

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 72.8 bits (178), Expect = 1e-15
 Identities = 20/115 (17%), Positives = 49/115 (42%), Gaps = 10/115 (8%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPN 181
           D Y++  ++G G +  V       T      K +       K+ +++EI+ +  L   P 
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR-HPT 84

Query: 182 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL----YPTLTDYDIRYYIYELLKVM 232
           +V L D   D +     +I+E+++  +        +  +++ +   Y+ ++ K +
Sbjct: 85  LVNLHDAFEDDNE--MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 137

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 72.1 bits (176), Expect = 1e-15
 Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 12/121 (9%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK------PVKKKKIKREIKILQNLC 177
            D YE+   +G G  SEV    ++  +    +K+L+      P    + +RE +    L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL- 64

Query: 178 GGPNVVKLLDIVRDQHSKTPS--LIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKVM 232
             P +V + D    +    P   ++ EYV+    + +      +T       I +  + +
Sbjct: 65  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 124

Query: 233 S 233
           +
Sbjct: 125 N 125

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 3e-15
 Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 13/121 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-----PVKKKKIKREIKILQNLCGG 179
           +DYEV+  +G G Y    +    +  +  + K L        +K+ +  E+ +L+ L   
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-H 62

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLY------PTLTDYDIRYYIYELLKVM 232
           PN+V+  D + D+ + T  ++ EY    D   V+         L +  +   + +L   +
Sbjct: 63  PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 122

Query: 233 S 233
            
Sbjct: 123 K 123

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 70.5 bits (172), Expect = 6e-15
 Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 17/124 (13%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------------KKKIKREIK 171
            ++YE    +GRG  S V   I+  T +   +KI+                ++   +E+ 
Sbjct: 2   YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 61

Query: 172 ILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLY--PTLTDYDIRYYIYEL 228
           IL+ + G PN+++L D           L+F+ +   + F  L    TL++ + R  +  L
Sbjct: 62  ILRKVSGHPNIIQLKDTYETNTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 119

Query: 229 LKVM 232
           L+V+
Sbjct: 120 LEVI 123

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (173), Expect = 6e-15
 Identities = 22/115 (19%), Positives = 53/115 (46%), Gaps = 9/115 (7%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP--VKKKKIKREIKILQNLCGGPNV 182
           + Y +   +GRG++  V   +  ++ +  + K +K     +  +K+EI IL       N+
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRNI 63

Query: 183 VKLLDIVRDQHSKTPSLIFEYVNSTD-FKVL---YPTLTDYDIRYYIYELLKVMS 233
           + L +           +IFE+++  D F+ +      L + +I  Y++++ + + 
Sbjct: 64  LHLHESFESMEE--LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQ 116

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 1e-14
 Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGP 180
           +D+++V+ +G G Y EV   +N  T E   +KI+   +     + IK+EI I + L    
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHE 63

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYV-NSTDFKVLYP--TLTDYDIRYYIYELLKVMS 233
           NVVK     R        L  EY      F  + P   + + D + + ++L+  + 
Sbjct: 64  NVVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 117

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 1e-14
 Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 12/121 (9%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNV 182
            +  Y   + +G G +  V++    ++ E   IK +    K+   RE++I++ L    N+
Sbjct: 18  QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKL-DHCNI 75

Query: 183 VKLLDIVRDQHSKTPS----LIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKVM 232
           V+L         K       L+ +YV  T ++V         TL    ++ Y+Y+L + +
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135

Query: 233 S 233
           +
Sbjct: 136 A 136

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 1e-14
 Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 9/116 (7%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK----KKIKREIKILQNLCGGP 180
             Y  +  +G G Y  V    +     R  IK + P +     ++  REIKIL       
Sbjct: 8   PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HE 66

Query: 181 NVVKLLDIVRD---QHSKTPSLIFEYVNSTDFKVL-YPTLTDYDIRYYIYELLKVM 232
           N++ + DI+R    +  K   L+   + +  +K+L    L++  I Y++Y++L+ +
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGL 122

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 2e-14
 Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 12/117 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCG 178
           +D++  + +G G +S V     + T+    IKIL+        K   + RE  ++  L  
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 66

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTD---FKVLYPTLTDYDIRYYIYELLKVM 232
            P  VKL    +D           Y  + +   +     +  +   R+Y  E++  +
Sbjct: 67  HPFFVKLYFTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 121

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.6 bits (169), Expect = 2e-14
 Identities = 22/143 (15%), Positives = 56/143 (39%), Gaps = 10/143 (6%)

Query: 110 EYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-----PVKKK 164
           +++  E     +     Y+ ++ +G G    V    +   +    IK L          K
Sbjct: 2   QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK 61

Query: 165 KIKREIKILQNLCGGPNVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYD 220
           +  RE+ +++ +    N++ LL++   Q +    +   L+ E +++   +V+   L    
Sbjct: 62  RAYRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 120

Query: 221 IRYYIYELLKVMSIFIRWSTVLC 243
           + Y +Y++L  +        +  
Sbjct: 121 MSYLLYQMLCGIKHLHSAGIIHR 143

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 5e-14
 Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---------KKKIKREIKILQ 174
           +  Y+V   +G G +  V+ GI V+ N    IK ++  +           ++  E+ +L+
Sbjct: 3   ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62

Query: 175 NLCGG-PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELL 229
            +  G   V++LLD      S    LI E          +      L +   R + +++L
Sbjct: 63  KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 120

Query: 230 KVM 232
           + +
Sbjct: 121 EAV 123

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 68.1 bits (166), Expect = 5e-14
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 12/118 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK------KKIKREIKILQNLCG 178
             +  +R++G G +  V+   +V  +E   IK +    K      + I +E++ LQ L  
Sbjct: 15  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR- 73

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKVMS 233
            PN ++       +H  T  L+ EY   +     +V    L + +I    +  L+ ++
Sbjct: 74  HPNTIQYRGCYLREH--TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 6e-14
 Identities = 26/132 (19%), Positives = 56/132 (42%), Gaps = 15/132 (11%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---------KKKIKREIKILQN 175
           D Y+   ++G G+++ V +    +T  +   K +K  +         ++ I+RE+ IL+ 
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 176 LCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKVM 232
           +   PNV+ L ++  ++      LI E V      DF     +LT+ +   ++ ++L  +
Sbjct: 70  IQ-HPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126

Query: 233 SIFIRWSTVLCY 244
                       
Sbjct: 127 YYLHSLQIAHFD 138

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.9 bits (163), Expect = 9e-14
 Identities = 23/115 (20%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP---VKKKKIKREIKILQNLCGGP 180
           +  Y    K+G+G    V+  ++V T +   I+ +      KK+ I  EI +++     P
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNP 77

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP--TLTDYDIRYYIYELLKVMS 233
           N+V  LD           ++ EY+       +     + +  I     E L+ + 
Sbjct: 78  NIVNYLDSYLVG--DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALE 130

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (163), Expect = 1e-13
 Identities = 20/117 (17%), Positives = 43/117 (36%), Gaps = 11/117 (9%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCG 178
           +D+ + + +G+G + +VF      TN+   IK LK          +    E ++L     
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKVM 232
            P +  +    + + +     + EY+N  D                 +Y  E++  +
Sbjct: 62  HPFLTHMFCTFQTKEN--LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 116

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 2e-13
 Identities = 23/132 (17%), Positives = 47/132 (35%), Gaps = 12/132 (9%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEG-----INVNTNERCIIKILKPVK----KKKIKREIKIL 173
            ++     + +G G + +V E      I  +      +K+LKP      ++ +  E+K+L
Sbjct: 21  PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 80

Query: 174 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYPTLTDYDIRYYIYELLKVM 232
             L    N+V LL            +I EY    D    L      +        +++  
Sbjct: 81  SYLGNHMNIVNLLGACTIG--GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138

Query: 233 SIFIRWSTVLCY 244
            + +    +L +
Sbjct: 139 ELALDLEDLLSF 150

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 2e-13
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 15/128 (11%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK-----IKREIKILQNLCGG 179
             YE + K+G+G + EVF+  +  T ++  +K +    +K+       REIKILQ L   
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KH 68

Query: 180 PNVVKLLDIVRDQHSK------TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLK 230
            NVV L++I R + S       +  L+F++       +L       T  +I+  +  LL 
Sbjct: 69  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 128

Query: 231 VMSIFIRW 238
            +    R 
Sbjct: 129 GLYYIHRN 136

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 3e-13
 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 12/118 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCG 178
           +D+E+ R +G+GK+  V+      +     +K+L   +      + +++RE++I  +L  
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 64

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKVMS 233
            PN+++L     D       LI EY                 +     YI EL   +S
Sbjct: 65  HPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 120

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 9e-13
 Identities = 30/118 (25%), Positives = 62/118 (52%), Gaps = 12/118 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK-----IKREIKILQNLCGG 179
           ++++ V K+G G Y  V++  N  T E   +K ++   + +       REI +L+ L   
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-H 60

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL----YPTLTDYDIRYYIYELLKVMS 233
           PN+VKLLD++  ++     L+FE+++    K +       +    I+ Y+++LL+ ++
Sbjct: 61  PNIVKLLDVIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.1 bits (155), Expect = 1e-12
 Identities = 17/112 (15%), Positives = 44/112 (39%), Gaps = 6/112 (5%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP-VKKKKIKREIKILQNLCGGPNVV 183
           + Y + RK+G G + +++ G ++   E   IK+     K  ++  E KI + + GG  + 
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIP 66

Query: 184 KLLDIVRDQHSKTPSLIFEYVNSTD---FKVLYPTLTDYDIRYYIYELLKVM 232
            +     +       ++ E +  +    F       +   +     +++  +
Sbjct: 67  TIRWCGAEGDY--NVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRI 116

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 62.6 bits (151), Expect = 3e-12
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 12/116 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGG 179
           + Y  + K+G G Y  V++  N N  E   +K ++  K          REI IL+ L   
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELK-H 59

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKVM 232
            N+VKL D++  +      L+FE+++    K+L      L     + ++ +LL  +
Sbjct: 60  SNIVKLYDVIHTKKRLV--LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (150), Expect = 5e-12
 Identities = 21/117 (17%), Positives = 48/117 (41%), Gaps = 12/117 (10%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP--VKKKKIKREIKILQNLCGGP 180
            ++  ++V ++G G++ EV+ G   N + +  +K LK   +       E  +++ L    
Sbjct: 11  PRETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ-HQ 68

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVM 232
            +V+L  +V  +      +I EY+ +              LT   +     ++ + M
Sbjct: 69  RLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 1e-11
 Identities = 17/116 (14%), Positives = 49/116 (42%), Gaps = 10/116 (8%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-PVKKKKIKREIKILQNLCGGPN 181
           +  + ++++ +G+G++ +V  G       +  +K +K     +    E  ++  L    N
Sbjct: 5   NMKELKLLQTIGKGEFGDVMLGD--YRGNKVAVKCIKNDATAQAFLAEASVMTQLR-HSN 61

Query: 182 VVKLLDIVRDQHSKTPSLIFEYV-NSTDFKVLY----PTLTDYDIRYYIYELLKVM 232
           +V+LL ++ ++      ++ EY+   +    L       L    +  +  ++ + M
Sbjct: 62  LVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 116

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 1e-11
 Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 19/119 (15%)

Query: 99  VYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNER-----C 153
            Y D         W++         +++ E  + +G G + +V        ++       
Sbjct: 19  FYVDFREYEYDLKWEF--------PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQV 70

Query: 154 IIKILK----PVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTD 208
            +K+LK      +++ +  E+K++  L    N+V LL       S    LIFEY    D
Sbjct: 71  AVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL--SGPIYLIFEYCCYGD 127

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 61.3 bits (148), Expect = 2e-11
 Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 13/119 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCG 178
           +D+ V R +GRG + EV+     +T +   +K L   +      +     E  +L  +  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 179 G--PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKVM 232
           G  P +V +            S I + +N  D       +   ++ D+R+Y  E++  +
Sbjct: 64  GDCPFIVCMSYAFHTPDK--LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 120

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.9 bits (147), Expect = 2e-11
 Identities = 16/117 (13%), Positives = 42/117 (35%), Gaps = 12/117 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK------PVKKKKIKREIKILQNLCG 178
            D++++R +G G +  V    + +      +K+LK        + +    E  +L  +  
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-T 62

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKVM 232
            P ++++    +D        I +Y+                +   ++Y  E+   +
Sbjct: 63  HPFIIRMWGTFQDAQQIFM--IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL 117

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.5 bits (146), Expect = 2e-11
 Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 10/117 (8%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK--PVKKKKIKREIKILQNLCGGP 180
           ++ D  +  K+G G+Y EV+EG+    +    +K LK   ++ ++  +E  +++ +   P
Sbjct: 15  ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HP 73

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYV-NSTDFKVLY----PTLTDYDIRYYIYELLKVM 232
           N+V+LL +   +      +I E++        L       ++   + Y   ++   M
Sbjct: 74  NLVQLLGVCTREPPFY--IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 128

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 2e-11
 Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 14/116 (12%)

Query: 128 EVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK--------KKIKREIKILQNLCGG 179
           E +  +G G+++ V++  + NTN+   IK +K   +        +   REIK+LQ L   
Sbjct: 1   EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-H 59

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVM 232
           PN++ LLD     H    SL+F+++ +    ++      LT   I+ Y+   L+ +
Sbjct: 60  PNIIGLLDA--FGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 113

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (145), Expect = 2e-11
 Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 11/116 (9%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKK-----IKREIKILQNLCGG 179
             YE + K+G G Y  VF+  N  T+E   +K ++     +       REI +L+ L   
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-H 60

Query: 180 PNVVKLLDIVRDQHSKTPSLIFEYVNS---TDFKVLYPTLTDYDIRYYIYELLKVM 232
            N+V+L D++        +L+FE+ +      F      L    ++ ++++LLK +
Sbjct: 61  KNIVRLHDVLHSDK--KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGL 114

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.2 bits (145), Expect = 3e-11
 Identities = 21/115 (18%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIK------REIKILQNLCG 178
           D ++ ++ +G G +  V    +  +     +KIL   K  K+K       E +ILQ +  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99

Query: 179 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYDIRYYIYELLKVM 232
            P +VKL    +D  +    + +         +      ++   R+Y  +++   
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (143), Expect = 4e-11
 Identities = 21/121 (17%), Positives = 50/121 (41%), Gaps = 15/121 (12%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK-------KKIKREIKILQN 175
            ++  E+ R +G G++ +V +GI ++     +   +K  K        +K  +E   ++ 
Sbjct: 5   QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ 64

Query: 176 LCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP----TLTDYDIRYYIYELLKV 231
               P++VKL+ ++ +       +I E     + +        +L    +  Y Y+L   
Sbjct: 65  F-DHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120

Query: 232 M 232
           +
Sbjct: 121 L 121

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (143), Expect = 4e-11
 Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 11/116 (9%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPN 181
            +   ++GRG +  V++G++  T        L+  K     +++ K E ++L+ L   PN
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ-HPN 69

Query: 182 VVKLLDIVRD--QHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKVM 232
           +V+  D      +  K   L+ E + S   K     +  +    +R +  ++LK +
Sbjct: 70  IVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGL 125

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 5e-11
 Identities = 22/116 (18%), Positives = 45/116 (38%), Gaps = 10/116 (8%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP--VKKKKIKREIKILQNLCGGP 180
           D  D   ++++G G++  V  G          IK++K   + + +   E K++ NL    
Sbjct: 2   DPKDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HE 59

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYV-NSTDFKVLY---PTLTDYDIRYYIYELLKVM 232
            +V+L  +   Q  +   +I EY+ N      L           +     ++ + M
Sbjct: 60  KLVQLYGVCTKQ--RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAM 113

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 7e-11
 Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 15/134 (11%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK------PVKKKKIKREIKILQNL 176
           D +D +    +G G + +V +        R    I +          +    E+++L  L
Sbjct: 8   DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 67

Query: 177 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFI 236
              PN++ LL     +H     L  EY    +       L D+  +  + E     +I  
Sbjct: 68  GHHPNIINLLGAC--EHRGYLYLAIEYAPHGN-------LLDFLRKSRVLETDPAFAIAN 118

Query: 237 RWSTVLCYQSFLYI 250
             ++ L  Q  L+ 
Sbjct: 119 STASTLSSQQLLHF 132

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 58.7 bits (141), Expect = 8e-11
 Identities = 19/110 (17%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKIL-KPVKKKKIKREIKILQNLCGGPNVVKL 185
           Y+V R++G G +  +FEG N+  N++  IK   +     +++ E +  + L G   +  +
Sbjct: 7   YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 66

Query: 186 LDIVRDQHSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVM 232
                 Q      L+ + +  +   +L       +   +     ++L  +
Sbjct: 67  YYF--GQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARV 114

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (140), Expect = 1e-10
 Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 15/124 (12%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCI-IKILKPVK-----KKKIKREIKILQNLCG 178
             YE V ++G G Y +VF+  ++    R + +K ++             RE+ +L++L  
Sbjct: 7   QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 66

Query: 179 G--PNVVKLLDIVRDQHSKTPS---LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELL 229
              PNVV+L D+     +   +   L+FE+V+      L     P +    I+  +++LL
Sbjct: 67  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 126

Query: 230 KVMS 233
           + + 
Sbjct: 127 RGLD 130

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 2e-10
 Identities = 19/119 (15%), Positives = 53/119 (44%), Gaps = 11/119 (9%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINV---NTNERCIIKILKPVK-------KKKIKREIKILQ 174
           +++E+++ +G G Y +VF    +   +T +   +K+LK           +  + E ++L+
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 175 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYDIRYYIYELLKVM 232
           ++   P +V L    + +      L +         +      T+++++ Y+ E++  +
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLAL 142

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 3e-10
 Identities = 18/85 (21%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP--VKKKKIKREIKILQNLCGGP 180
           D  +   V+++G G++  V  G  +N  ++  IK ++   + ++    E +++  L   P
Sbjct: 3   DPSELTFVQEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEEDFIEEAEVMMKLS-HP 60

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYVN 205
            +V+L  +  +Q      L+FE++ 
Sbjct: 61  KLVQLYGVCLEQAP--ICLVFEFME 83

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 3e-10
 Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 8/120 (6%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCG 178
           +D++ ++ +G+G + +V       T     +KIL+               E ++LQN   
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR- 63

Query: 179 GPNVVKLLDIVRD-QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIR 237
            P +  L    +                           T+   R+Y  E++  +     
Sbjct: 64  HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 6e-10
 Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 17/123 (13%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCI---IKILKPVK------KKKIKREIKIL 173
            + D  ++ K+G G +  V  G     + + +   +K LKP             RE+  +
Sbjct: 6   GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65

Query: 174 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELL 229
            +L    N+++L  +V     K   ++ E                      +  Y  ++ 
Sbjct: 66  HSLD-HRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 121

Query: 230 KVM 232
           + M
Sbjct: 122 EGM 124

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 3e-09
 Identities = 14/119 (11%), Positives = 42/119 (35%), Gaps = 16/119 (13%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILK-----PVKKKKIKREIKILQNLC 177
                 V +++G G +  V++G     +    +K+L      P + +  K E+ +L+   
Sbjct: 6   PDGQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62

Query: 178 GGPNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLY---PTLTDYDIRYYIYELLKVM 232
              N++  +           +++ ++   +  +  L+          +     +  + M
Sbjct: 63  -HVNILLFMGYSTAPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 117

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 3e-09
 Identities = 22/121 (18%), Positives = 51/121 (42%), Gaps = 15/121 (12%)

Query: 123 DQDDYEVV-RKVGRGKYSEVFEGINVNTNERCI--IKILKPVKKKK----IKREIKILQN 175
            +D+  +   ++G G +  V +G+     ++    IK+LK   +K     + RE +I+  
Sbjct: 6   KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65

Query: 176 LCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLY---PTLTDYDIRYYIYELLKV 231
           L   P +V+L+ + + +      L+ E        K L      +   ++   ++++   
Sbjct: 66  L-DNPYIVRLIGVCQAEA---LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 121

Query: 232 M 232
           M
Sbjct: 122 M 122

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.6 bits (128), Expect = 4e-09
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 14/121 (11%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKK-------KKIKREIKILQN 175
           D    ++ + +G G++ EV  G      +R I   +K +K        +    E  I+  
Sbjct: 24  DISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 83

Query: 176 LCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL----YPTLTDYDIRYYIYELLKV 231
               PNV+ L  +V         +I E++ +              T   +   +  +   
Sbjct: 84  FD-HPNVIHLEGVVTKST--PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 140

Query: 232 M 232
           M
Sbjct: 141 M 141

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 7e-09
 Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP--VKKKKIKREIKILQNLCGGP 180
            ++   +  K+G+G + EV+ G    T  R  IK LKP  +  +   +E ++++ L    
Sbjct: 15  PRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLR-HE 72

Query: 181 NVVKLLDIVRDQHSKTPSLIFEYV 204
            +V+L  +V ++      ++ EY+
Sbjct: 73  KLVQLYAVVSEEP---IYIVTEYM 93

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 1e-08
 Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 124 QDDYEVVRKVGRGKYSEVFEGINVNTNER----CIIKILKPVKKKK----IKREIKILQN 175
           + +++ ++ +G G +  V++G+ +   E+      IK L+     K    I  E  ++ +
Sbjct: 8   ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 67

Query: 176 LCGGPNVVKLLDIVRDQHSKTPSLIFEYVN 205
           +   P+V +LL I      +   LI + + 
Sbjct: 68  VD-NPHVCRLLGICLTSTVQ---LITQLMP 93

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.0 bits (123), Expect = 2e-08
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 6/124 (4%)

Query: 127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILK--PVKKKKIKREIKILQNLCGGPNVVK 184
           Y +VRK+G G +S V+   ++  N    +KI++   V  +  + EIK+LQ +    +  K
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV-NDADNTK 73

Query: 185 LLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCY 244
              +     +    L+  + +     V    + +      +  + K     I    V   
Sbjct: 74  EDSM---GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 130

Query: 245 QSFL 248
              L
Sbjct: 131 SKQL 134

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 2e-08
 Identities = 15/99 (15%), Positives = 41/99 (41%), Gaps = 13/99 (13%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNE-------RCIIKILKPVKKKK----IKREIK 171
            +D   + + +G G + +V     +  ++       +  +K+LK    +K    +  E++
Sbjct: 11  PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 70

Query: 172 ILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFK 210
           +++ +    N++ LL            +I EY +  + +
Sbjct: 71  MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLR 107

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 2e-08
 Identities = 21/112 (18%), Positives = 44/112 (39%), Gaps = 14/112 (12%)

Query: 131 RKVGRGKYSEVFEGI--NVNTNERCIIKILK-----PVKKKKIKREIKILQNLCGGPNVV 183
           +++G G +  V +G        +   +KILK     P  K ++  E  ++Q L   P +V
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIV 71

Query: 184 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP---TLTDYDIRYYIYELLKVM 232
           +++ I   +      L+ E                + D +I   ++++   M
Sbjct: 72  RMIGICEAES---WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 120

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.0 bits (121), Expect = 3e-08
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 12/96 (12%)

Query: 124 QDDYEVVRKVGRGKYSEVFEG-----INVNTNERCIIKILKPVK----KKKIKREIKILQ 174
           +++ E VR +G G +  VF+      +         +K+LK       +   +RE  ++ 
Sbjct: 12  RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 71

Query: 175 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFK 210
                PN+VKLL +      K   L+FEY+   D  
Sbjct: 72  EFD-NPNIVKLLGV--CAVGKPMCLLFEYMAYGDLN 104

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 9e-08
 Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 12/95 (12%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVN-----TNERCIIKILKPVK----KKKIKREIKIL 173
            ++   + R++G+G +  V+EG+           R  IK +        + +   E  ++
Sbjct: 18  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 77

Query: 174 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTD 208
           +      +VV+LL +V     +   +I E +   D
Sbjct: 78  KEF-NCHHVVRLLGVV--SQGQPTLVIMELMTRGD 109

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 2e-07
 Identities = 20/124 (16%), Positives = 47/124 (37%), Gaps = 13/124 (10%)

Query: 125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQ-NLCGGPNVV 183
               +   +G+G++ EV+ G      E   +KI    +++   RE +I Q  +    N++
Sbjct: 3   RTIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL 60

Query: 184 KLLDIVRDQHSKTPS--LIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTV 241
             +      +       L+ +Y            L DY +  Y   +  ++ + +  ++ 
Sbjct: 61  GFIAADNKDNGTWTQLWLVSDYHEHGS-------LFDY-LNRYTVTVEGMIKLALSTASG 112

Query: 242 LCYQ 245
           L + 
Sbjct: 113 LAHL 116

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 6e-07
 Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 11/131 (8%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCI-----IKILKP----VKKKKIKREIKIL 173
            +D  ++ + +GRG + +V E      ++        +K+LK      + + +  E+KIL
Sbjct: 11  PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 70

Query: 174 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMS 233
            ++    NVV LL            ++           L     ++       E L    
Sbjct: 71  IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY--K 128

Query: 234 IFIRWSTVLCY 244
            F+    ++CY
Sbjct: 129 DFLTLEHLICY 139

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 6e-07
 Identities = 27/145 (18%), Positives = 56/145 (38%), Gaps = 14/145 (9%)

Query: 99  VYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCI---I 155
           V+ D++ L P+     + + +             +GRG +  V+ G  ++ + + I   +
Sbjct: 2   VHIDLSALNPELVQAVQHVVIGP-SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 60

Query: 156 KILKPVKK----KKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV 211
           K L  +       +   E  I+++    PNV+ LL I        P ++  Y+   D + 
Sbjct: 61  KSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGS-PLVVLPYMKHGDLRN 118

Query: 212 LY----PTLTDYDIRYYIYELLKVM 232
                    T  D+  +  ++ K M
Sbjct: 119 FIRNETHNPTVKDLIGFGLQVAKGM 143

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 1e-06
 Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 15/122 (12%)

Query: 123 DQDDYEVVRKVGRGKYSEVFEGINVNTNER----CIIKILKPV----KKKKIKREIKILQ 174
                   + +G G++ EV++G+   ++ +      IK LK      ++     E  I+ 
Sbjct: 5   HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMG 64

Query: 175 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLK 230
                 N+++L  ++         +I EY+ +              +   +   +  +  
Sbjct: 65  QFS-HHNIIRLEGVISKYKPMM--IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA 121

Query: 231 VM 232
            M
Sbjct: 122 GM 123

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	252
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.98
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.96
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.96
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.96
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.96
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.96
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.95
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.95
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.95
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.95
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.95
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.95
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.95
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.95
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.95
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.95
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.95
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.94
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.94
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.94
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.94
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.94
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.94
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.94
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.94
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.94
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.94
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.94
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.93
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.93
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.93
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.93
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.93
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.93
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.93
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.93
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.93
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.93
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.92
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.92
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.92
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.92
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.92
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.92
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.92
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.91
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.91
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.91
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.91
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.91
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.9
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.9
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.9
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.9
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.9
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.89
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.89
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.88
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.81
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.69
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.79
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.9
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.15
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	92.07
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	81.26

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.98  E-value=2.8e-32  Score=236.52  Aligned_cols=155  Identities=64%  Similarity=1.060  Sum_probs=145.0

Q ss_pred             CCCCccCccccccccCCCCccccCCCcccccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHH
Q 025443           91 LPAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREI  170 (252)
Q Consensus        91 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei  170 (252)
                      ++.+|.++++.+.+...+.+||+++...+.++..++|++++.||+|+||+||+|+++.+|+.||||+++....+++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei   80 (328)
T d3bqca1           1 GPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI   80 (328)
T ss_dssp             CCCCCCCSSSTTTTTTSCHHHHCGGGCCCCCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHH
T ss_pred             CCCCCcceeeccccccCCCccchhhhcccCCCCCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHH
Confidence            35678899999999999999999999999999899999999999999999999999999999999999988888999999


Q ss_pred             HHHHhcCCCCcceeeeeEEEcCCCceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          171 KILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       171 ~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++|+.+++|+||++++++|.....+.+++|||||++|+|..+.+.+++.+++.++.||+.||+|||++||||.+.
T Consensus        81 ~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDi  155 (328)
T d3bqca1          81 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDV  155 (328)
T ss_dssp             HHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence            999999779999999999987655569999999999999998899999999999999999999999999999864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.5e-29  Score=213.54  Aligned_cols=121  Identities=20%  Similarity=0.305  Sum_probs=111.0

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      ...+.|++++.||+|+||+||+|+++.+|..||||+++..   ..+.+.+|+++|++++ |||||++++++.+++.  +|
T Consensus         9 ~p~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~--~~   85 (288)
T d2jfla1           9 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENN--LW   85 (288)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCC-CTTBCCEEEEEEETTE--EE
T ss_pred             CcccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCe--EE
Confidence            3456799999999999999999999999999999999753   3567899999999999 9999999999999865  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||+||+|.+++    +.+++.+++.|+.||+.||+|||++||||.+.
T Consensus        86 lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDi  136 (288)
T d2jfla1          86 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL  136 (288)
T ss_dssp             EEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeec
Confidence            999999999999987    46999999999999999999999999999865

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.2e-29  Score=213.01  Aligned_cols=119  Identities=24%  Similarity=0.308  Sum_probs=108.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++...    .+.+.+|+.+|++++ |||||++++++.+++.  +||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~~~~~~~~~~~--~~i   80 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVVKFYGHRREGNI--QYL   80 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCC-CTTBCCEEEEEEETTE--EEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCC-CCCEeeEeeeeccCce--eEE
Confidence            578999999999999999999999999999999997532    456889999999999 9999999999999865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||+||+|.+++   +.+++.+++.|+.||+.||+|||++||||.+.
T Consensus        81 vmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDi  129 (271)
T d1nvra_          81 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI  129 (271)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             EEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcc
Confidence            99999999999999   46999999999999999999999999999864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.1e-29  Score=211.55  Aligned_cols=119  Identities=20%  Similarity=0.331  Sum_probs=110.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||++++.         ..+.+.+|+.+|++++ |||||+++++|.+++.
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~   87 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTD   87 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCE
Confidence            46799999999999999999999999999999999642         2467899999999999 9999999999999866


Q ss_pred             ceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        +|||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus        88 --~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDi  139 (293)
T d1jksa_          88 --VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL  139 (293)
T ss_dssp             --EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             --EEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeeccc
Confidence              99999999999999999   67999999999999999999999999999864

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.5e-29  Score=209.21  Aligned_cols=119  Identities=22%  Similarity=0.336  Sum_probs=110.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||+||+|+++.+++.||+|++.+.      ..+.+.+|+++|++++ |||||++++++.+++.  +
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~--~   81 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATR--V   81 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE--E
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcC-CCCCCeEEEEEEECCE--E
Confidence            57899999999999999999999999999999999642      2567889999999999 9999999999999865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++   +.+++.+++.|+.||+.||+|||++||||.+.
T Consensus        82 ~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDi  132 (263)
T d2j4za1          82 YLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI  132 (263)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             EEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeee
Confidence            9999999999999998   67999999999999999999999999999865

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-28  Score=213.47  Aligned_cols=120  Identities=18%  Similarity=0.298  Sum_probs=110.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++++.||+|+||+||+|.++.+|+.||||+++...  ...+.+|+++|+.++ |||||+++++|.+++.  +||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~--~~lvm   80 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR-HRNILHLHESFESMEE--LVMIF   80 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTE--EEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCE--EEEEE
Confidence            578999999999999999999999999999999997654  345789999999999 9999999999999865  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||+||+|.+++    ..+++.+++.|+.||+.||+|||++||||.+..
T Consensus        81 E~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlK  129 (321)
T d1tkia_          81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIR  129 (321)
T ss_dssp             CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             ecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCccccc
Confidence            999999999999    268999999999999999999999999998653

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.7e-29  Score=212.26  Aligned_cols=119  Identities=19%  Similarity=0.291  Sum_probs=110.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV---KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++..   ..+.+.+|+.+|++++ |||||+++++|.+++.  +|||
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~--~~iv   95 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGDE--LWVV   95 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTE--EEEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCC-CCCEeeEeEEEEECCE--EEEE
Confidence            46799999999999999999999999999999999743   3567899999999999 9999999999999865  9999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+||+|.+++  +.+++.+++.|+.||+.||+|||++||||.+.
T Consensus        96 mEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDi  142 (293)
T d1yhwa1          96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDI  142 (293)
T ss_dssp             EECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EEecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence            9999999999988  67999999999999999999999999999864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.95  E-value=3.8e-28  Score=212.45  Aligned_cols=120  Identities=18%  Similarity=0.297  Sum_probs=110.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||++....   .+.+.+|+.+|++|+ |||||++++++.+++.  +|||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~--~~iv  101 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNE--MVMI  101 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTC-CTTBCCEEEEEEETTE--EEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCE--EEEE
Confidence            578999999999999999999999999999999997543   456889999999999 9999999999999865  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      ||||+||+|.+++    +.+++.+++.|+.||+.||+|||++||||.+..
T Consensus       102 mE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiK  151 (350)
T d1koaa2         102 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK  151 (350)
T ss_dssp             ECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeec
Confidence            9999999999988    469999999999999999999999999998653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=1.6e-28  Score=211.27  Aligned_cols=119  Identities=23%  Similarity=0.292  Sum_probs=107.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .+.|++++.||+|+||+||+|+++.+|+.||||++....    .+.+.+|+++|++++ |||||++++++.+++.  +||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~--~~l   84 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK-HPNIVALDDIYESGGH--LYL   84 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCC-CTTBCCEEEEEECSSE--EEE
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCE--EEE
Confidence            467999999999999999999999999999999997532    456789999999999 9999999999998865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||+||+|.+++   +.+++.+++.|+.||+.||+|||++||||.+.
T Consensus        85 vmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDi  133 (307)
T d1a06a_          85 IMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL  133 (307)
T ss_dssp             EECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             EEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEe
Confidence            99999999999999   57999999999999999999999999999875

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=2.4e-28  Score=208.19  Aligned_cols=119  Identities=18%  Similarity=0.308  Sum_probs=110.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||+||+|++..+|+.||||+++..  ..+++.+|+.+|++++ |||||++++++.+++.  +||||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~--~~iv~   92 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPP--FYIIT   92 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS--CEEEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCC-CCCEecCCccEeeCCe--eEEEe
Confidence            46899999999999999999999999999999999753  3677999999999999 9999999999998876  99999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++|+|.+++     ..+++..+..|+.||+.||+|||++||||.+.
T Consensus        93 E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDl  141 (287)
T d1opja_          93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL  141 (287)
T ss_dssp             ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCcc
Confidence            999999999998     46899999999999999999999999999864

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.95  E-value=3.7e-28  Score=212.62  Aligned_cols=119  Identities=19%  Similarity=0.321  Sum_probs=109.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++...   .+.+.+|+.+|++|+ |||||+++++|.+++.  +|||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~--~~iv  104 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYE--MVLI  104 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCC-STTBCCEEEEEECSSE--EEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCE--EEEE
Confidence            467999999999999999999999999999999997643   456789999999999 9999999999998865  9999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+||+|.+++    ..+++.+++.|+.||+.||+|||++||||.+.
T Consensus       105 mE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDi  153 (352)
T d1koba_         105 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDI  153 (352)
T ss_dssp             EECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccc
Confidence            9999999999887    36999999999999999999999999999864

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.4e-28  Score=208.34  Aligned_cols=119  Identities=19%  Similarity=0.286  Sum_probs=110.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec------cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP------VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++.      ...+.+.+|+++|++++ |||||++++++.+++.  +
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~--~   83 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEK--L   83 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-STTBCCEEEEEECSSE--E
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcC-CCCeeEEEEEEEECCE--E
Confidence            4679999999999999999999999999999999964      23567899999999999 9999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++   +.+++.+++.++.||+.||+|||++||||.+.
T Consensus        84 ~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDi  134 (288)
T d1uu3a_          84 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL  134 (288)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             EEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcC
Confidence            9999999999999998   68999999999999999999999999999754

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.95  E-value=4.9e-28  Score=205.29  Aligned_cols=120  Identities=23%  Similarity=0.340  Sum_probs=110.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------------hHHHHHHHHHHHhcCCCCcceeeeeEEEc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------------KKKIKREIKILQNLCGGPNVVKLLDIVRD  191 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~  191 (252)
                      .++|++.+.||+|+||+||+|++..+|+.||||+++...            .+.+.+|+.+|++++.|||||++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            478999999999999999999999999999999996532            23578999999999779999999999999


Q ss_pred             CCCceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          192 QHSKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       192 ~~~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++.  +|||||||+||||.+++   +.+++++++.|+.||+.||+|||++||||.+.
T Consensus        82 ~~~--~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDl  136 (277)
T d1phka_          82 NTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDL  136 (277)
T ss_dssp             SSE--EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             Ccc--eEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCccccc
Confidence            866  99999999999999999   68999999999999999999999999999864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.1e-28  Score=204.30  Aligned_cols=121  Identities=21%  Similarity=0.291  Sum_probs=102.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++...     .+.+.+|+++|++++ |||||++++++.+...+.+|
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~   81 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLY   81 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCC-CTTBCCEEEEEEC----CEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCC-CCCEeeEEEEEEeCCCCEEE
Confidence            467999999999999999999999999999999996532     456889999999999 99999999999765445599


Q ss_pred             EEecCCCCCCHHhHc-------cCCCHHHHHHHHHHHHHHHHHHHHCC-----CeEEee
Q 025443          199 LIFEYVNSTDFKVLY-------PTLTDYDIRYYIYELLKVMSIFIRWS-----TVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l-------~~l~~~~~~~i~~qi~~aL~yLH~~~-----IV~~~~  245 (252)
                      ||||||+||+|.+++       +.+++..++.++.||+.||+|||++|     |||.+.
T Consensus        82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDi  140 (269)
T d2java1          82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL  140 (269)
T ss_dssp             EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------C
T ss_pred             EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcC
Confidence            999999999999998       36999999999999999999999987     999764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=8.9e-28  Score=206.68  Aligned_cols=118  Identities=19%  Similarity=0.288  Sum_probs=107.9

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      +.|+.++.||+|+||+||+|++..+|+.||||+++...      .+.+.+|+++|++|+ |||||++++++.+++.  +|
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~--~~   91 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHT--AW   91 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTE--EE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCC-CCCEeeEEEEEEECCE--EE
Confidence            45999999999999999999999999999999997532      356889999999999 9999999999999865  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||.||+|..++   +.+++.+++.|+.||+.||.|||++||||.+.
T Consensus        92 iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDi  141 (309)
T d1u5ra_          92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV  141 (309)
T ss_dssp             EEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             EEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCC
Confidence            999999999998776   67999999999999999999999999999864

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.9e-28  Score=210.02  Aligned_cols=119  Identities=14%  Similarity=0.211  Sum_probs=109.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||+|+++...    .+++.+|+.+|+.++ |||||+++++|.+++.  +||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~--~~i   81 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGE--ISI   81 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCC-CTTBCCEEEEEECSSE--EEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCE--EEE
Confidence            578999999999999999999999999999999997432    467899999999999 9999999999999865  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      |||||+||+|.+++   +.+++..++.++.||+.||.|||+ +||||.+.
T Consensus        82 VmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDi  131 (322)
T d1s9ja_          82 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV  131 (322)
T ss_dssp             EEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCC
T ss_pred             EEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcccc
Confidence            99999999999999   679999999999999999999997 59999764

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-27  Score=207.50  Aligned_cols=119  Identities=18%  Similarity=0.292  Sum_probs=110.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||.||+|+++.+|+.||||++++.      ..+.+.+|+.+|+.++ |||||+++++|.+++.  +
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~--~   80 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDR--L   80 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSE--E
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCC-CCCEEEEEeeeccccc--c
Confidence            57899999999999999999999999999999999743      3567889999999999 9999999999999866  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|.+++   +.+++..++.++.||+.||+|||++||||.+.
T Consensus        81 ~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDl  131 (337)
T d1o6la_          81 CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI  131 (337)
T ss_dssp             EEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             ccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCcccccc
Confidence            9999999999999999   67999999999999999999999999999754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=2.1e-27  Score=201.01  Aligned_cols=121  Identities=18%  Similarity=0.248  Sum_probs=109.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC--c
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS--K  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~--~  195 (252)
                      .++|++.+.||+|+||+||+|++..+|+.||||+++...      .+.+.+|+++|+.++ |||||++++++.+.+.  .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~-hpniv~~~~~~~~~~~~~~   84 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETPAGP   84 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEECSSSE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcC-CCCCCcccceeeeccCCCc
Confidence            578999999999999999999999999999999996432      356889999999999 9999999999986542  3


Q ss_pred             eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .+|||||||+||+|.+++   +.+++.+++.|+.||+.||+|||++||||.+.
T Consensus        85 ~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDi  137 (277)
T d1o6ya_          85 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV  137 (277)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             eEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccc
Confidence            589999999999999988   68999999999999999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.7e-27  Score=199.10  Aligned_cols=121  Identities=20%  Similarity=0.331  Sum_probs=106.8

Q ss_pred             CCCe-EEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcC--CCc
Q 025443          124 QDDY-EVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQ--HSK  195 (252)
Q Consensus       124 ~~~y-~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~--~~~  195 (252)
                      .++| ++.++||+|+||+||+|++..++..||+|++....     .+.+.+|+++|++++ |||||++++++.+.  +..
T Consensus         7 ~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~   85 (270)
T d1t4ha_           7 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKK   85 (270)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCE
T ss_pred             CCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEeeccccCC
Confidence            3455 67788999999999999999999999999996432     456889999999999 99999999998752  234


Q ss_pred             eeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCC--CeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWS--TVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~--IV~~~~  245 (252)
                      .+|||||||+||+|.+++   ..+++.+++.|+.||+.||+|||++|  |||.+.
T Consensus        86 ~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDi  140 (270)
T d1t4ha_          86 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDL  140 (270)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCC
T ss_pred             EEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCc
Confidence            589999999999999999   67999999999999999999999999  999864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.1e-27  Score=201.94  Aligned_cols=119  Identities=18%  Similarity=0.241  Sum_probs=107.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeec------cchHHHHHHHHHHH-hcCCCCcceeeeeEEEcCCCcee
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKP------VKKKKIKREIKILQ-NLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~~~~~~~Ei~il~-~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++      ...+.+.+|+.++. .++ |||||++++++.+++.  +
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~-hp~Iv~~~~~~~~~~~--~   78 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE-HPFLTHMFCTFQTKEN--L   78 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTT-CTTBCCEEEEEECSSE--E
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCC-CCcEEEEEEEEccCCc--e
Confidence            689999999999999999999999999999999964      23456778888776 577 9999999999999866  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||||+||+|.+++   ..+++.+++.++.||+.||+|||++||||.+..
T Consensus        79 yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDik  130 (320)
T d1xjda_          79 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLK  130 (320)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             eEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCc
Confidence            9999999999999999   679999999999999999999999999998653

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=3.8e-27  Score=203.33  Aligned_cols=119  Identities=14%  Similarity=0.285  Sum_probs=109.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++..      ..+.+.+|+.+|+.++ |||||++++++.+++.  +
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~--~   79 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQ--I   79 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSE--E
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhcc-CcChhheeeeEeeCCe--e
Confidence            56799999999999999999999999999999999642      3567899999999999 9999999999999865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||||||+||+|..++   ..+++..++.++.||+.||+|||++||||.+.
T Consensus        80 ~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDi  130 (316)
T d1fota_          80 FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDL  130 (316)
T ss_dssp             EEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             eeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEcccc
Confidence            9999999999999998   67899999999999999999999999999764

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.4e-27  Score=201.11  Aligned_cols=119  Identities=25%  Similarity=0.410  Sum_probs=105.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++..     ..+++.+|+++|++++ |||||+++++|.+++.  +|
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-Hp~Iv~~~~~~~~~~~--~~   77 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENK--LY   77 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCC-CTTBCCEEEEEEETTE--EE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC-CCcEEEeccccccccc--ee
Confidence            36899999999999999999999999999999999642     2567889999999999 9999999999999866  99


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||.++.+....    ..+++.+++.|+.||+.||+|||++||||++.
T Consensus        78 iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDi  128 (298)
T d1gz8a_          78 LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL  128 (298)
T ss_dssp             EEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             EEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEcccc
Confidence            999999865444333    46999999999999999999999999999865

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9e-27  Score=195.84  Aligned_cols=118  Identities=14%  Similarity=0.267  Sum_probs=107.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++++.||+|+||+||+|.+. ++..||||+++..  ..+++.+|++++++++ |||||+++|++.+++.  +||||
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~--~~lv~   79 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAP--ICLVF   79 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS--CEEEE
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcC-CCCcccccceeccCCc--eEEEE
Confidence            468999999999999999999985 5778999999753  3677999999999999 9999999999998876  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++|+|.+++    ..++++.+..|+.||+.||+|||++||||.+.
T Consensus        80 E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDl  127 (263)
T d1sm2a_          80 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL  127 (263)
T ss_dssp             ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTC
T ss_pred             EecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeeccc
Confidence            999999999998    45899999999999999999999999999754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.2e-26  Score=195.98  Aligned_cols=117  Identities=17%  Similarity=0.265  Sum_probs=105.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++++.||+|+||.||+|.+. ++..||||+++..  ..+.+.+|+++|++++ |||||++++++.++ .  +||||
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~-~--~~iv~   86 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQE-P--IYIIT   86 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCC-CTTBCCEEEEECSS-S--CEEEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCC-CCCEeEEEeeeccC-C--eEEEE
Confidence            478999999999999999999984 6788999999753  3677999999999999 99999999987654 3  89999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++|+|.+++     ..+++.++..|+.||+.||.|||++||||.+.
T Consensus        87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDi  135 (272)
T d1qpca_          87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL  135 (272)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCcc
Confidence            999999999988     36999999999999999999999999999865

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.9e-26  Score=196.10  Aligned_cols=119  Identities=17%  Similarity=0.272  Sum_probs=103.6

Q ss_pred             CCCeEEEeE-eeecCceEEEEEEEcC--CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRK-VGRGKYSEVFEGINVN--TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~-lG~G~fg~V~~~~~~~--~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|.+.+. ||+|+||+||+|.++.  ++..||||+++...    .+++.+|+++|++++ |||||++++++.++ .  
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~~-~--   82 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRLIGVCQAE-A--   82 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEESS-S--
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCC-CCCEeeEeeeeccC-e--
Confidence            467888884 9999999999998754  35579999997532    467899999999999 99999999999764 3  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +|||||||+||+|.+++    +.+++.++..|+.||+.||+|||++||||++..
T Consensus        83 ~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlK  136 (285)
T d1u59a_          83 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLA  136 (285)
T ss_dssp             EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCc
Confidence            89999999999999987    469999999999999999999999999998653

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1.1e-26  Score=198.86  Aligned_cols=119  Identities=18%  Similarity=0.214  Sum_probs=105.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc---EEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE---RCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++.+.||+|+||+||+|.++.+++   .||||.+....    .+.+.+|+++|++++ |||||++++++.+++.  
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~--  101 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTP--  101 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS--
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC-CCCCccEEEEEeeCCE--
Confidence            4689999999999999999999977664   58999986432    457899999999999 9999999999988876  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|||||||+||+|.+++    +.+++.++..|+.||+.||+|||++||||.+.
T Consensus       102 ~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDl  154 (299)
T d1jpaa_         102 VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDL  154 (299)
T ss_dssp             CEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             EEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCcc
Confidence            99999999999999988    46899999999999999999999999999864

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.2e-26  Score=201.62  Aligned_cols=120  Identities=18%  Similarity=0.282  Sum_probs=105.1

Q ss_pred             CCCeEEEe-EeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEc--CCCceeEEE
Q 025443          124 QDDYEVVR-KVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRD--QHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~--~~~~~~~lV  200 (252)
                      .++|++++ .||+|+||+||+|++..+++.||||+++.  .+.+.+|+.++.++.+|||||+++++|.+  .....+|||
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~--~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~iv   87 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV   87 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC--cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEE
Confidence            57899876 59999999999999999999999999964  45678999997766449999999999975  222459999


Q ss_pred             ecCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||+||+|.++|     ..+++.+++.|+.||+.||+|||++||||.+.
T Consensus        88 mEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDi  137 (335)
T d2ozaa1          88 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV  137 (335)
T ss_dssp             EECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccc
Confidence            9999999999998     25899999999999999999999999999864

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1e-26  Score=195.11  Aligned_cols=117  Identities=16%  Similarity=0.207  Sum_probs=107.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|+++++||+|+||+||+|++ .+++.||||+++..  ..+.+.+|+.++++++ |||||++++++.+++.  +++||
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~-HpnIv~~~g~~~~~~~--~~iv~   78 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRP--IFIIT   78 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEE-TTTEEEEEEEEESSSSCHHHHHHHHHHHHTCC-CTTBCCEEEEECCSSS--EEEEE
T ss_pred             hHHCEEeEEEecCCCeEEEEEEE-CCCCEEEEEEECcCcCCHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCc--eEEEE
Confidence            46788999999999999999998 47889999999753  3678999999999999 9999999999998876  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEe
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCY  244 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~  244 (252)
                      |||++|+|.+++    ..+++..+..|+.||++||+|||++||+|.+
T Consensus        79 Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~d  125 (258)
T d1k2pa_          79 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD  125 (258)
T ss_dssp             ECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSC
T ss_pred             EccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCccccc
Confidence            999999999997    5799999999999999999999999999975

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1.6e-26  Score=201.94  Aligned_cols=119  Identities=18%  Similarity=0.291  Sum_probs=110.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++..      ..+.+.+|+++|+.++ |||||++++++.+...  +
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~--~  116 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--L  116 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSE--E
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcC-CCcEeecccccccccc--c
Confidence            57899999999999999999999999999999999642      3567889999999999 9999999999999865  9


Q ss_pred             EEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          198 SLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ++||||+.||+|.+++   +.+++.+++.|+.||+.||.|||++||||.+.
T Consensus       117 ~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDI  167 (350)
T d1rdqe_         117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL  167 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcC
Confidence            9999999999999998   68999999999999999999999999999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=3.5e-26  Score=200.88  Aligned_cols=119  Identities=18%  Similarity=0.285  Sum_probs=105.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc------hHHHHH---HHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK------KKKIKR---EIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~---Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||.||+|+++.+|+.||||++....      ...+.+   |+.+++.++ |||||+++++|.+++.
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~-hpnIv~l~~~~~~~~~   81 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDK   81 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSC-CTTBCCEEEEEECSSE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCC-CCcEEEEEEEEEECCE
Confidence            578999999999999999999999999999999996422      223444   466777788 9999999999999865


Q ss_pred             ceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        +|||||||+||+|.+++   ..+++.+++.|+.||+.||+|||++||||.+.
T Consensus        82 --~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDl  133 (364)
T d1omwa3          82 --LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDL  133 (364)
T ss_dssp             --EEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             --EEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceee
Confidence              99999999999999999   67999999999999999999999999999864

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.5e-26  Score=200.14  Aligned_cols=133  Identities=23%  Similarity=0.390  Sum_probs=108.2

Q ss_pred             cccCCCcccccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceee
Q 025443          111 YWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKL  185 (252)
Q Consensus       111 ~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l  185 (252)
                      |+..+...+.|...++|++++.||+|+||+||+|.++.+|+.||||+++...     .+.+.+|+++|+.++ |+|||++
T Consensus         4 ~~~~~~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpniv~l   82 (346)
T d1cm8a_           4 FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR-HENVIGL   82 (346)
T ss_dssp             BCCEECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC-BTTBCCC
T ss_pred             cEEEeccCceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcC-CCCeeEE
Confidence            3444444455667899999999999999999999999999999999997432     456889999999999 9999999


Q ss_pred             eeEEEcCCC----ceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          186 LDIVRDQHS----KTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       186 ~~~~~~~~~----~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +++|...+.    ..+||||||| |++|..++  +.+++..++.++.||+.||+|||++||||.+.
T Consensus        83 ~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDi  147 (346)
T d1cm8a_          83 LDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDL  147 (346)
T ss_dssp             SEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EEEeccCccccccceEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence            999986542    2479999999 57888877  68999999999999999999999999999864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.6e-26  Score=195.71  Aligned_cols=115  Identities=11%  Similarity=0.182  Sum_probs=101.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|++++.||+|+||+||+|++.   ..||||+++..     ..+.+.+|+.+|++++ |||||++++++.++ .  ++
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~~~~~~~~~-~--~~   79 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTAP-Q--LA   79 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCC-CTTBCCEEEEECSS-S--CE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC-CCCEeeeeEEEecc-E--EE
Confidence            578999999999999999999763   35999999642     2567899999999999 99999999987554 3  89


Q ss_pred             EEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||||+||+|.+++    ..+++.++..|+.||++||+|||++||||++.
T Consensus        80 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDl  130 (276)
T d1uwha_          80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL  130 (276)
T ss_dssp             EEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             EEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEecccc
Confidence            999999999999998    45999999999999999999999999999864

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.8e-26  Score=199.76  Aligned_cols=125  Identities=22%  Similarity=0.378  Sum_probs=108.2

Q ss_pred             ccCCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          120 QWGDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       120 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .|...++|++++.||+|+||+||+|++..+|+.||||+++...     .+++.+|+++|+.++ |+|||++++++.....
T Consensus        13 ~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-h~~iv~~~~~~~~~~~   91 (348)
T d2gfsa1          13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARS   91 (348)
T ss_dssp             EEEEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSS
T ss_pred             cccCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcC-CCCeeeEEEEEeeccc
Confidence            3555689999999999999999999999999999999997532     456889999999999 9999999999974321


Q ss_pred             ---ceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 ---KTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ---~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                         ...++||||+.||+|.+++  +.+++.+++.|+.||+.||+|||++||||++.
T Consensus        92 ~~~~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDi  147 (348)
T d2gfsa1          92 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDL  147 (348)
T ss_dssp             TTTCCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             cccCceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence               1245666777899999998  68999999999999999999999999999865

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.7e-26  Score=191.46  Aligned_cols=118  Identities=14%  Similarity=0.256  Sum_probs=104.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .++|++++.||+|+||.||+|.+  .|..||||+++... .+.+.+|+++|++++ |||||++++++.+.. +.+|||||
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~-~~~~lv~e   81 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEK-GGLYIVTE   81 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC--HHHHHTHHHHTTCC-CTTBCCEEEEECCC---CCEEEEC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEecC-CcEEEEEe
Confidence            56899999999999999999998  57889999997654 567999999999999 999999999986543 23899999


Q ss_pred             CCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||++|+|.+++     ..+++..+..|+.||+.||.|||+++|||.+.
T Consensus        82 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dl  129 (262)
T d1byga_          82 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL  129 (262)
T ss_dssp             CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceecccc
Confidence            99999999998     24899999999999999999999999999864

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.5e-26  Score=192.02  Aligned_cols=111  Identities=19%  Similarity=0.256  Sum_probs=97.2

Q ss_pred             eEeeecCceEEEEEEEcC--CCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEecC
Q 025443          131 RKVGRGKYSEVFEGINVN--TNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEY  203 (252)
Q Consensus       131 ~~lG~G~fg~V~~~~~~~--~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E~  203 (252)
                      ++||+|+||+||+|.+..  +++.||||+++...     .+.+.+|+++|++++ |||||++++++.++.   .||||||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~g~~~~~~---~~lvmE~   88 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRMIGICEAES---WMLVMEM   88 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCC-CTTBCCEEEEEESSS---EEEEEEC
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCC-CCCCceEEEEeccCC---EEEEEEc
Confidence            479999999999998653  46789999996432     457899999999999 999999999997643   8999999


Q ss_pred             CCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          204 VNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       204 ~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+||+|.+++   ..+++.++..|+.||+.||+|||++||||.+.
T Consensus        89 ~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDl  133 (277)
T d1xbba_          89 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL  133 (277)
T ss_dssp             CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             CCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCC
Confidence            9999999998   56999999999999999999999999999754

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.8e-26  Score=196.00  Aligned_cols=114  Identities=25%  Similarity=0.380  Sum_probs=101.5

Q ss_pred             EEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--------hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          129 VVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--------KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       129 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--------~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .++.||+|+||+||+|+++.+|+.||||+++...        .+.+.+|+.+|+.++ |||||++++++.+++.  +|||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~~~~~~~--~~iv   78 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSN--ISLV   78 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTC--CEEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCC-CCCEeEEEeeeccCCc--eeeh
Confidence            4689999999999999999999999999996432        246889999999999 9999999999999876  9999


Q ss_pred             ecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||.|+++..++   ..+++.+++.|+.||+.||+|||++||||.+.
T Consensus        79 mE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDi  126 (299)
T d1ua2a_          79 FDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDL  126 (299)
T ss_dssp             EECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             hhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccC
Confidence            9999988888777   56999999999999999999999999999864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.3e-25  Score=190.86  Aligned_cols=117  Identities=21%  Similarity=0.274  Sum_probs=104.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++.+.||+|+||+||+|++..+ ..||||+++...  .+.+.+|+.+|++++ |+|||++++++.++ .  +||||
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~~-~--~~lv~   90 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLYAVVSEE-P--IYIVT   90 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHCC-CTTBCCEEEEECSS-S--CEEEE
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhcc-cCCEeEEEEEEecC-C--eEEEE
Confidence            46899999999999999999998644 679999997543  577999999999999 99999999998553 3  89999


Q ss_pred             cCCCCCCHHhHc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY-----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l-----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++|+|..++     +.+++.++..|+.||+.||+|||++||||.+.
T Consensus        91 Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~Dl  139 (285)
T d1fmka3          91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL  139 (285)
T ss_dssp             CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             EecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccc
Confidence            999999999888     46999999999999999999999999999864

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.4e-25  Score=190.41  Aligned_cols=118  Identities=25%  Similarity=0.389  Sum_probs=109.3

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSL  199 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~l  199 (252)
                      ++|++++.||+|+||+||+|++..+|+.||||+++...     ..++.+|+.+|+.++ |+|||++++++.+...  .+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~--~~i   78 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKK--LTL   78 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSE--EEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcC-cCCEEeeccccccccc--eeE
Confidence            68999999999999999999999999999999996432     467889999999999 9999999999999876  999


Q ss_pred             EecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          200 IFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       200 V~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++.|++|..++   +.+++..++.++.|++.||+|||++||||.+.
T Consensus        79 v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDi  127 (292)
T d1unla_          79 VFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL  127 (292)
T ss_dssp             EEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecc
Confidence            99999999998887   67999999999999999999999999999865

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.93  E-value=1.2e-25  Score=190.73  Aligned_cols=118  Identities=25%  Similarity=0.360  Sum_probs=107.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK-----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPS  198 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~  198 (252)
                      .++|+++++||+|+||+||+|++. +|+.||||+++...     .+++.+|+.+|++++ |||||++++++.+++.  .|
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~--~~   76 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELK-HSNIVKLYDVIHTKKR--LV   76 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSC--EE
T ss_pred             CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC-CCcEEeeeeecccCCc--ee
Confidence            368999999999999999999994 78999999996432     467899999999999 9999999999999977  99


Q ss_pred             EEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          199 LIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       199 lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |+|||+.++++..+.   +.+++.+++.|+.||+.||+|||++||||.+.
T Consensus        77 i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDi  126 (286)
T d1ob3a_          77 LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL  126 (286)
T ss_dssp             EEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             EEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCC
Confidence            999999988777776   67999999999999999999999999999864

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.5e-26  Score=197.94  Aligned_cols=121  Identities=17%  Similarity=0.276  Sum_probs=105.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC----C
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH----S  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~----~  194 (252)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++..     ..+++.+|+.+|++++ |||||+++++|...+    .
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~f~~~~~~~~~   94 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKTLEEF   94 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCSTTTC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEecccccccC
Confidence            47899999999999999999999999999999999743     2456889999999999 999999999997542    2


Q ss_pred             ceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +.+|||||||.|+++..+...+++..++.+++||+.||+|||++||||.+.
T Consensus        95 ~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDl  145 (355)
T d2b1pa1          95 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDL  145 (355)
T ss_dssp             CEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ceeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccC
Confidence            469999999987766665588999999999999999999999999999754

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1e-25  Score=190.26  Aligned_cols=120  Identities=22%  Similarity=0.335  Sum_probs=107.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---------hHHHHHHHHHHHhcC-CCCcceeeeeEEEcCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---------KKKIKREIKILQNLC-GGPNVVKLLDIVRDQH  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---------~~~~~~Ei~il~~l~-~h~nIv~l~~~~~~~~  193 (252)
                      .++|++.+.||+|+||+||+|++..+|+.||||+++...         ..++.+|+.+|++++ +|+|||++++++.+++
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            468999999999999999999999999999999997432         234679999999986 3899999999999986


Q ss_pred             CceeEEEecCCCC-CCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          194 SKTPSLIFEYVNS-TDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       194 ~~~~~lV~E~~~g-g~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .  +|+||||+.+ +++.+++   ..+++.+++.|+.||+.||+|||++||||.+.
T Consensus        83 ~--~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDi  136 (273)
T d1xwsa_          83 S--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDI  136 (273)
T ss_dssp             E--EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             e--EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccC
Confidence            6  9999999976 6888887   67999999999999999999999999999865

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.9e-25  Score=192.00  Aligned_cols=120  Identities=23%  Similarity=0.326  Sum_probs=104.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc-----EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE-----RCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||+||+|++..+++     .||+|.+...    ....+.+|+.+|.++.+|||||++++++.+.+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            4789999999999999999999876543     6999998542    245788999999999439999999999999876


Q ss_pred             ceeEEEecCCCCCCHHhHcc--------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP--------------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~--------------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        +|||||||+||+|.++|.                          .+++.+++.|+.||+.||+|||++||||.+.
T Consensus       116 --~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDl  190 (325)
T d1rjba_         116 --IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  190 (325)
T ss_dssp             --CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             --EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence              999999999999999981                          2789999999999999999999999999754

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.5e-25  Score=186.20  Aligned_cols=118  Identities=19%  Similarity=0.338  Sum_probs=103.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC---cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCce
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN---ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKT  196 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~  196 (252)
                      .++|++++.||+|+||.||+|++..++   ..||||.++...    .+.+.+|+.+|++++ |||||++++++.++ .  
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~-~--   81 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-P--   81 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSS-S--
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC-e--
Confidence            468999999999999999999986543   568999986432    456899999999999 99999999999643 3  


Q ss_pred             eEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          197 PSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       197 ~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      +|||||||++|+|.+++    ..+++.+++.++.||+.||+|||++||||.+.
T Consensus        82 ~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDl  134 (273)
T d1mp8a_          82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI  134 (273)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             EEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeecccc
Confidence            89999999999999987    46899999999999999999999999999754

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.1e-25  Score=192.46  Aligned_cols=122  Identities=23%  Similarity=0.340  Sum_probs=103.0

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC---
Q 025443          122 GDQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS---  194 (252)
Q Consensus       122 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~---  194 (252)
                      ...++|++++.||+|+||+||+|.+..+|+.||||+++...    .+.+.+|+.+|+.|+ |+||+++++++.....   
T Consensus         5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~-hp~iv~~~~~~~~~~~~~~   83 (345)
T d1pmea_           5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQM   83 (345)
T ss_dssp             CCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTTTC
T ss_pred             CcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcC-CCCCCcEEEEEeecccccc
Confidence            34578999999999999999999999999999999997533    456889999999999 9999999999976532   


Q ss_pred             ceeEEEecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ..+||+| |+.||+|.+++  +.+++.+++.++.||+.||+|||++||||.+.
T Consensus        84 ~~~~l~~-~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDI  135 (345)
T d1pmea_          84 KDVYLVT-HLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL  135 (345)
T ss_dssp             CCEEEEE-ECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ceEEEEE-eecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCC
Confidence            1245555 55689999999  78999999999999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-24  Score=187.47  Aligned_cols=118  Identities=18%  Similarity=0.266  Sum_probs=102.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCc----EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNE----RCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .++|++++.||+|+||+||+|.+..+|+    .||+|.++..    ..+.+.+|+++|++++ |||||++++++.++.  
T Consensus         8 ~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~--   84 (317)
T d1xkka_           8 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST--   84 (317)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCC-CTTBCCEEEEEESSS--
T ss_pred             HHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCC--
Confidence            4679999999999999999999987775    5888888642    3567999999999999 999999999998764  


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       .+++|||+.+|+|.+++    ..+++..+..|+.||+.||+|||++||||.+.
T Consensus        85 -~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDl  137 (317)
T d1xkka_          85 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDL  137 (317)
T ss_dssp             -EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             -eeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcc
Confidence             78899999999999888    56999999999999999999999999999864

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.9e-25  Score=193.80  Aligned_cols=118  Identities=21%  Similarity=0.355  Sum_probs=101.5

Q ss_pred             CeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeeeeEEEcC----CCceeEEEe
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQ----HSKTPSLIF  201 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~----~~~~~~lV~  201 (252)
                      +|+.+++||+|+||+||+|++..+|+.||||+++... ....+|+++|++++ |+|||+++++|...    +..++||||
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~Ei~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~lv~   98 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVL   98 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-SSCCHHHHHHHHCC-CTTBCCEEEEEEEC--CCSCCEEEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc-hHHHHHHHHHHhcC-CCCCCcEEEEEEecCccCCceEEEEEE
Confidence            6999999999999999999999999999999997543 23458999999999 99999999998643    223589999


Q ss_pred             cCCCCCCHHhHc------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||++|++..+.      ..+++.+++.|+.||+.||+|||++||||.+.
T Consensus        99 Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDi  148 (350)
T d1q5ka_          99 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDI  148 (350)
T ss_dssp             ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             eccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            999876544443      46999999999999999999999999999865

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.1e-24  Score=184.78  Aligned_cols=119  Identities=15%  Similarity=0.221  Sum_probs=105.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC----cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCc
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN----ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSK  195 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~----~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~  195 (252)
                      .+.|+..+.||+|+||.||+|.+..++    ..||||+++...    ...+.+|+++|++++ |||||+++|++.+.+. 
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~~~g~~~~~~~-   83 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS-HHNIIRLEGVISKYKP-   83 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS-
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcC-CCCEeeeeEEEecCCc-
Confidence            567999999999999999999987654    479999996532    346889999999999 9999999999998876 


Q ss_pred             eeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          196 TPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       196 ~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       +++|||||.+|+|.+++    ..+++.++..++.||+.||+|||++||||.+.
T Consensus        84 -~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDl  136 (283)
T d1mqba_          84 -MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDL  136 (283)
T ss_dssp             -EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             -eEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCcc
Confidence             99999999999999987    56999999999999999999999999999764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=7.9e-25  Score=187.96  Aligned_cols=121  Identities=17%  Similarity=0.269  Sum_probs=105.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcE--EEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNER--CIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~--vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .++|++.+.||+|+||.||+|.++.+|..  ||||.++..    ..+.+.+|+++|.++.+|||||++++++.+.+.  +
T Consensus         9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~--~   86 (309)
T d1fvra_           9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY--L   86 (309)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE--E
T ss_pred             HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCe--e
Confidence            46899999999999999999999888864  678887542    345789999999999449999999999998865  9


Q ss_pred             EEEecCCCCCCHHhHc-------------------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          198 SLIFEYVNSTDFKVLY-------------------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l-------------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      |||||||+||+|.++|                   ..+++..+..++.||+.||.|||++||||.+..
T Consensus        87 ~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlk  154 (309)
T d1fvra_          87 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLA  154 (309)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccc
Confidence            9999999999999998                   248999999999999999999999999998653

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.5e-25  Score=185.90  Aligned_cols=119  Identities=16%  Similarity=0.184  Sum_probs=97.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC-C--cEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT-N--ERCIIKILKPV------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~-~--~~vAvK~i~~~------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||.||+|++..+ +  ..||||+++..      ..+.+.+|+.+|++++ |||||++++++.++ .
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~~~g~~~~~-~   84 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLTP-P   84 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSS-S
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeec-c
Confidence            46799999999999999999987543 2  46899998642      2467899999999999 99999999999765 3


Q ss_pred             ceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        ++||||||++|+|.+++    +.+++..+..++.||+.||.|||++||+|.+..
T Consensus        85 --~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDik  138 (273)
T d1u46a_          85 --MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLA  138 (273)
T ss_dssp             --CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             --hheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeec
Confidence              79999999999999988    569999999999999999999999999998653

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.8e-24  Score=185.83  Aligned_cols=120  Identities=21%  Similarity=0.300  Sum_probs=106.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||.||+|++.     .+++.||||+++...    ...+.+|+.+++++.+|||||++++++.++..
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            578999999999999999999863     456789999997533    45688999999999559999999999998876


Q ss_pred             ceeEEEecCCCCCCHHhHcc---------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP---------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~---------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        +|||||||+||+|.+++.                     .+++.++..|+.||+.||+|||++||||.+.
T Consensus       102 --~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDL  171 (311)
T d1t46a_         102 --TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDL  171 (311)
T ss_dssp             --CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             --EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccc
Confidence              999999999999999981                     4889999999999999999999999999753

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.5e-24  Score=185.16  Aligned_cols=123  Identities=26%  Similarity=0.324  Sum_probs=105.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC----
Q 025443          123 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH----  193 (252)
Q Consensus       123 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~----  193 (252)
                      ..++|++++.||+|+||+||+|++..+|+.||||++...     ..+++.+|+++|++++ |+||+++++++....    
T Consensus         8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~-h~nii~~~~~~~~~~~~~~   86 (318)
T d3blha1           8 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYN   86 (318)
T ss_dssp             BGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEC------
T ss_pred             ccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhc-CCCccceEeeeeccccccc
Confidence            368999999999999999999999999999999998542     2466889999999999 999999999986532    


Q ss_pred             --CceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          194 --SKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       194 --~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        .+.+|||||||+++++..+.   ..+++..++.++.||+.||+|||++||||++..
T Consensus        87 ~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlK  144 (318)
T d3blha1          87 RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMK  144 (318)
T ss_dssp             ----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             ccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcC
Confidence              13489999999988777665   679999999999999999999999999999754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.5e-24  Score=183.92  Aligned_cols=121  Identities=15%  Similarity=0.281  Sum_probs=101.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCC-------cEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTN-------ERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQ  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-------~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~  192 (252)
                      .++|++++.||+|+||.||+|++..++       ..||||+++...    ...+.+|...+.++.+|||||++++++.++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            578999999999999999999986554       479999996533    456888999999994499999999999988


Q ss_pred             CCceeEEEecCCCCCCHHhHc-------------------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLY-------------------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l-------------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +.  +++|||||++|+|.++|                   ..+++.++..++.||+.||+|||++||||.+..
T Consensus        92 ~~--~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiK  162 (299)
T d1fgka_          92 GP--LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA  162 (299)
T ss_dssp             SS--CEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             Ce--EEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeec
Confidence            66  99999999999999998                   138999999999999999999999999998653

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=2.6e-24  Score=183.98  Aligned_cols=119  Identities=22%  Similarity=0.334  Sum_probs=106.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc-----CCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV-----NTNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||+||+|+++     .+++.||||+++...    .+++.+|+.+|++++ |+||+++++++.+.+.
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~   90 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD-NPNIVKLLGVCAVGKP   90 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcC-CCCcccceeeeccCCc
Confidence            578999999999999999999975     356789999997532    457899999999999 9999999999998876


Q ss_pred             ceeEEEecCCCCCCHHhHcc---------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP---------------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~---------------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                        .++||||+++|+|.+++.                           .+++..+..|+.||+.||+|||++||||.+.
T Consensus        91 --~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDl  166 (301)
T d1lufa_          91 --MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL  166 (301)
T ss_dssp             --CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             --eEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEE
Confidence              999999999999999881                           2789999999999999999999999999764

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.7e-24  Score=186.91  Aligned_cols=120  Identities=18%  Similarity=0.386  Sum_probs=107.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEc---CCCcEEEEEEeecc-------chHHHHHHHHHHHhcCCCCcceeeeeEEEcCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINV---NTNERCIIKILKPV-------KKKKIKREIKILQNLCGGPNVVKLLDIVRDQH  193 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~-------~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~  193 (252)
                      .++|++++.||+|+||+||+|.+.   .+|+.||||+++..       ..+.+.+|+++|++++.|+||+++++++.+..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            578999999999999999999974   46899999998532       24678899999999983489999999999987


Q ss_pred             CceeEEEecCCCCCCHHhHc---cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          194 SKTPSLIFEYVNSTDFKVLY---PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       194 ~~~~~lV~E~~~gg~L~~~l---~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      .  +++|||||.||+|.+++   +.+++..+..++.||+.||+|||++||||.+.
T Consensus       103 ~--~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDi  155 (322)
T d1vzoa_         103 K--LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDI  155 (322)
T ss_dssp             E--EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             c--eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccC
Confidence            6  99999999999999999   67899999999999999999999999999864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.9e-24  Score=183.52  Aligned_cols=120  Identities=18%  Similarity=0.285  Sum_probs=106.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-----CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-----TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||+||+|.+..     ++..||||+++...    ...+.+|+.++++++ |+|||++++++...+.
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~   97 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVVRLLGVVSQGQP   97 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCC-CTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcC-CCCEeeeeeEEecCCc
Confidence            4789999999999999999999852     35789999997532    345889999999999 9999999999988876


Q ss_pred             ceeEEEecCCCCCCHHhHc-------------cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          195 KTPSLIFEYVNSTDFKVLY-------------PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l-------------~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                        .+||||||++|+|.+++             ..+++..+..++.|+++||.|||+++|||.+..
T Consensus        98 --~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk  160 (308)
T d1p4oa_          98 --TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLA  160 (308)
T ss_dssp             --CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCS
T ss_pred             --eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEc
Confidence              99999999999999987             236899999999999999999999999998654

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.2e-24  Score=181.10  Aligned_cols=121  Identities=24%  Similarity=0.406  Sum_probs=101.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCC-CcEEEEEEeeccc-----hHHHHHHHHHHHhc---CCCCcceeeeeEEEcC--
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNT-NERCIIKILKPVK-----KKKIKREIKILQNL---CGGPNVVKLLDIVRDQ--  192 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~-~~~vAvK~i~~~~-----~~~~~~Ei~il~~l---~~h~nIv~l~~~~~~~--  192 (252)
                      .++|++++.||+|+||+||+|++..+ ++.||||+++...     ...+.+|+.+|+.|   + ||||++++++|...  
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~-HpnIv~~~~~~~~~~~   84 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE-HPNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTC-CTTBCCEEEEEEEEEC
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcC-CCCcceeeeeeccccc
Confidence            57899999999999999999999766 6779999996422     34567888888776   6 99999999998642  


Q ss_pred             -CCceeEEEecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          193 -HSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       193 -~~~~~~lV~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                       ....++|+||||++|++....    ..+++..++.++.||+.||+|||++||||.+.
T Consensus        85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDi  142 (305)
T d1blxa_          85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL  142 (305)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCC
Confidence             224589999999988776554    56999999999999999999999999999864

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.8e-23  Score=179.72  Aligned_cols=116  Identities=21%  Similarity=0.342  Sum_probs=99.1

Q ss_pred             EEEeEeeecCceEEEEEEEcCCC---cEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          128 EVVRKVGRGKYSEVFEGINVNTN---ERCIIKILKPV----KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       128 ~~~~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~----~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .+.++||+|+||+||+|.+..++   ..||||+++..    ..+++.+|+++|++|+ |||||+++|++.+.+ +.+++|
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~-~~~~lv  107 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSE-GSPLVV  107 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEETT-TEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC-CCCEeEEeEEEEecC-CceEEE
Confidence            34678999999999999986654   36899999642    2467999999999999 999999999987654 348999


Q ss_pred             ecCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          201 FEYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       201 ~E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ||||++|+|.+++    ..+++.++..++.|++.||.|||+.||||++.
T Consensus       108 ~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDL  156 (311)
T d1r0pa_         108 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDL  156 (311)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             EEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCc
Confidence            9999999999988    45778899999999999999999999999864

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.4e-23  Score=179.04  Aligned_cols=121  Identities=21%  Similarity=0.292  Sum_probs=102.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcC-----CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCC
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVN-----TNERCIIKILKPVK----KKKIKREIKILQNLCGGPNVVKLLDIVRDQHS  194 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~----~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~  194 (252)
                      .++|++++.||+|+||.||+|.+..     +++.||||+++...    .+.+.+|+.++.++..|+|||.+++++.+.+ 
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~-   90 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-   90 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT-
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC-
Confidence            4789999999999999999999764     34689999997432    4567888888888865999999999887654 


Q ss_pred             ceeEEEecCCCCCCHHhHcc-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          195 KTPSLIFEYVNSTDFKVLYP-------------------TLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       195 ~~~~lV~E~~~gg~L~~~l~-------------------~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      ..+++|||||+||+|.+++.                   .+++.++..|+.||+.||.|||++||||.+.
T Consensus        91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDl  160 (299)
T d1ywna1          91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL  160 (299)
T ss_dssp             SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcC
Confidence            34899999999999999981                   3789999999999999999999999999865

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.89  E-value=2.5e-23  Score=177.21  Aligned_cols=119  Identities=17%  Similarity=0.264  Sum_probs=107.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEEec
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFE  202 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV~E  202 (252)
                      .++|++++.||+|+||+||+|++..+|+.||||+++.. ..+.+.+|+++++.++.++||+.+++++.+...  .|+|||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~--~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH--NVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE--EEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCc--cEEEEE
Confidence            46899999999999999999999999999999998653 345688999999999856999999999998865  999999


Q ss_pred             CCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          203 YVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       203 ~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      || ||+|.+++    ..+++.++..++.|++.||+|||++||||.+.
T Consensus        82 ~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDi  127 (293)
T d1csna_          82 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDI  127 (293)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             ec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence            99 58999888    46999999999999999999999999999864

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=2.2e-23  Score=177.70  Aligned_cols=118  Identities=14%  Similarity=0.233  Sum_probs=100.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCc-ceeeeeEEEcCCCceeEEEe
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPV-KKKKIKREIKILQNLCGGPN-VVKLLDIVRDQHSKTPSLIF  201 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~~Ei~il~~l~~h~n-Iv~l~~~~~~~~~~~~~lV~  201 (252)
                      .++|++++.||+|+||.||+|++..+|+.||||++... ..+++.+|+++++.++ |+| |+.+.+++.+.+.  .++||
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~-~~~~i~~~~~~~~~~~~--~~ivm   82 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ-GGVGIPTIRWCGAEGDY--NVMVM   82 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHST-TSTTCCCEEEEEEETTE--EEEEE
T ss_pred             CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHcc-CCCcccEEEEEEecCCE--EEEEE
Confidence            46899999999999999999999999999999998754 3456889999999999 555 5555666666644  99999


Q ss_pred             cCCCCCCHHhHc----cCCCHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 025443          202 EYVNSTDFKVLY----PTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQ  245 (252)
Q Consensus       202 E~~~gg~L~~~l----~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~  245 (252)
                      |||+ |+|.+.+    +.+++.++..++.|++.||+|||++||||.+.
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDi  129 (299)
T d1ckia_          83 ELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDV  129 (299)
T ss_dssp             ECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             EEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence            9996 5666655    57999999999999999999999999999865

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.1e-22  Score=174.08  Aligned_cols=119  Identities=14%  Similarity=0.148  Sum_probs=102.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHH--HhcCCCCcceeeeeEEEcCCC--ceeEEE
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVKKKKIKREIKIL--QNLCGGPNVVKLLDIVRDQHS--KTPSLI  200 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il--~~l~~h~nIv~l~~~~~~~~~--~~~~lV  200 (252)
                      .+|.+.++||+|+||.||+|++  +|+.||||+++....+.+.+|.+++  ..++ |||||++++++.+.+.  ..+|||
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~-HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhHHHHHHHHHHHhhCC-CCcCcceEEEEEeCCCcceEEEEE
Confidence            5689999999999999999987  7899999999876666655555544  5678 9999999999986542  258999


Q ss_pred             ecCCCCCCHHhHc--cCCCHHHHHHHHHHHHHHHHHHHH--------CCCeEEeee
Q 025443          201 FEYVNSTDFKVLY--PTLTDYDIRYYIYELLKVMSIFIR--------WSTVLCYQS  246 (252)
Q Consensus       201 ~E~~~gg~L~~~l--~~l~~~~~~~i~~qi~~aL~yLH~--------~~IV~~~~~  246 (252)
                      ||||++|+|.+++  ..+++.++..++.|++.||.|||+        +||||.+..
T Consensus        80 ~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlK  135 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK  135 (303)
T ss_dssp             EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCC
T ss_pred             EecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccC
Confidence            9999999999999  689999999999999999999996        599998654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=5.6e-20  Score=159.96  Aligned_cols=121  Identities=21%  Similarity=0.293  Sum_probs=99.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc--hHHHHHHHHHHHhcC----------CCCcceeeeeEEEcC
Q 025443          125 DDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK--KKKIKREIKILQNLC----------GGPNVVKLLDIVRDQ  192 (252)
Q Consensus       125 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~Ei~il~~l~----------~h~nIv~l~~~~~~~  192 (252)
                      ++|+++++||+|+||+||+|+++.+|+.||||+++...  .+.+.+|+++++.++          +|+|||++++++...
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            57999999999999999999999999999999997653  466789999998875          257899999998765


Q ss_pred             CCceeEEEecCCCCCCHHhHc------cCCCHHHHHHHHHHHHHHHHHHHH-CCCeEEee
Q 025443          193 HSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKVMSIFIR-WSTVLCYQ  245 (252)
Q Consensus       193 ~~~~~~lV~E~~~gg~L~~~l------~~l~~~~~~~i~~qi~~aL~yLH~-~~IV~~~~  245 (252)
                      .....+++|+++.++......      ..+++..++.++.||+.||+|||+ +||||++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDl  152 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDI  152 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCC
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccC
Confidence            544567777766544432222      578999999999999999999998 99999854

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.69  E-value=3.6e-17  Score=130.01  Aligned_cols=108  Identities=19%  Similarity=0.250  Sum_probs=86.8

Q ss_pred             eEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---------------------hHHHHHHHHHHHhcCCCCcceee
Q 025443          127 YEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---------------------KKKIKREIKILQNLCGGPNVVKL  185 (252)
Q Consensus       127 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---------------------~~~~~~Ei~il~~l~~h~nIv~l  185 (252)
                      +.+.++||+|+||+||+|++ .+|+.||||+++...                     .....+|...+.++. |.+++..
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~-~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~v~~~   79 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPKV   79 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCCE
T ss_pred             chhCCEeeeCcceEEEEEEC-CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc-CCCcceE
Confidence            45789999999999999998 478999999875310                     123457899999999 9999988


Q ss_pred             eeEEEcCCCceeEEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 025443          186 LDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWSTVLCYQS  246 (252)
Q Consensus       186 ~~~~~~~~~~~~~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~IV~~~~~  246 (252)
                      +++.   .   .+|+|||++++.+.+    +++..+..++.|++.||.|||++||||++..
T Consensus        80 ~~~~---~---~~lvme~~~~~~~~~----l~~~~~~~i~~ql~~~l~~lH~~giiHrDiK  130 (191)
T d1zara2          80 YAWE---G---NAVLMELIDAKELYR----VRVENPDEVLDMILEEVAKFYHRGIVHGDLS  130 (191)
T ss_dssp             EEEE---T---TEEEEECCCCEEGGG----CCCSCHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEec---C---CEEEEEeeccccccc----hhhHHHHHHHHHHHHHHHHHhhCCEEEccCC
Confidence            7652   2   479999999876544    4556677899999999999999999998753

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.79  E-value=5.3e-05  Score=60.68  Aligned_cols=111  Identities=16%  Similarity=0.192  Sum_probs=81.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEcCCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCceeEEE
Q 025443          124 QDDYEVVRKVGRGKYSEVFEGINVNTNERCIIKILKPVK---KKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLI  200 (252)
Q Consensus       124 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~~lV  200 (252)
                      .+.|+..+..+.++.+.||+...  .+..+.+|+.....   ...+.+|..++..+.++--+++++.+..+++.  .++|
T Consensus        13 ~~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~--~~lv   88 (263)
T d1j7la_          13 IEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW--SNLL   88 (263)
T ss_dssp             HTTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE--EEEE
T ss_pred             hhceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCc--eEEE
Confidence            35677776655555678998854  56678889875432   34578899999988766567888888877754  8999


Q ss_pred             ecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          201 FEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       201 ~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      ||+++|.++.+...  +......++.++.+.+.-||+..+
T Consensus        89 ~~~l~G~~~~~~~~--~~~~~~~~~~~l~~~l~~lH~~~~  126 (263)
T d1j7la_          89 MSEADGVLCSEEYE--DEQSPEKIIELYAECIRLFHSIDI  126 (263)
T ss_dssp             EECCSSEEHHHHTT--TCSCHHHHHHHHHHHHHHHHTSCC
T ss_pred             EEeccccccccccc--ccccHHHHHHHHHHHHHHHhccCc
Confidence            99999988877652  222344578888899999998643

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.90  E-value=0.0023  Score=50.34  Aligned_cols=101  Identities=15%  Similarity=0.076  Sum_probs=71.8

Q ss_pred             EeeecCc-eEEEEEEEcCCCcEEEEEEeeccchHHHHHHHHHHHhcCCC-CcceeeeeEEEcCCCceeEEEecCCCCCCH
Q 025443          132 KVGRGKY-SEVFEGINVNTNERCIIKILKPVKKKKIKREIKILQNLCGG-PNVVKLLDIVRDQHSKTPSLIFEYVNSTDF  209 (252)
Q Consensus       132 ~lG~G~f-g~V~~~~~~~~~~~vAvK~i~~~~~~~~~~Ei~il~~l~~h-~nIv~l~~~~~~~~~~~~~lV~E~~~gg~L  209 (252)
                      .+..|.. +.||+... .++..+.+|.........+..|+.+++.+.++ -.+++++.+..+++.  .++|||+++|.++
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~--~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGR--DWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSC--EEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCccCHhHHHHHHHHHHHHHhcCCCCCceeeecccccc--eEEEEEeeecccc
Confidence            4455543 67898876 56667899988776666788999999888632 235678888777765  8999999998776


Q ss_pred             HhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          210 KVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       210 ~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      .+..  ...   ..++.++...|.-||+...
T Consensus        94 ~~~~--~~~---~~~~~~l~~~la~LH~~~~  119 (255)
T d1nd4a_          94 LSSH--LAP---AEKVSIMADAMRRLHTLDP  119 (255)
T ss_dssp             TTSC--CCH---HHHHHHHHHHHHHHTTSCG
T ss_pred             cccc--ccH---HHHHHHHHHHHHHHccCCh
Confidence            5532  232   2345678888888997643

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.15  E-value=0.0092  Score=50.50  Aligned_cols=99  Identities=15%  Similarity=0.070  Sum_probs=59.8

Q ss_pred             EeEeeecCceEEEEEEEcCCCcEEEEEEeecc----------chHHHHHHHHHHHhcCCC--CcceeeeeEEEcCCCcee
Q 025443          130 VRKVGRGKYSEVFEGINVNTNERCIIKILKPV----------KKKKIKREIKILQNLCGG--PNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       130 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----------~~~~~~~Ei~il~~l~~h--~nIv~l~~~~~~~~~~~~  197 (252)
                      .+.||.|....||++.+..+++.+++|.-.+.          ...+...|.++|+.+..+  ..+++++.+  +.+.  .
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~--~  106 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEM--A  106 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTT--T
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCC--C
Confidence            46799999999999988777888999975321          234567799999877533  346666654  3333  6


Q ss_pred             EEEecCCCCCCH-HhHc--cCCCHHHHHHHHHHHHHHH
Q 025443          198 SLIFEYVNSTDF-KVLY--PTLTDYDIRYYIYELLKVM  232 (252)
Q Consensus       198 ~lV~E~~~gg~L-~~~l--~~l~~~~~~~i~~qi~~aL  232 (252)
                      ++|||++++..+ ...+  .......+..+...++.-+
T Consensus       107 ~lvmE~L~~~~~~~~~l~~~~~~~~~a~~lg~~La~~h  144 (392)
T d2pula1         107 VTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTL  144 (392)
T ss_dssp             EEEECCCTTSEEHHHHHHHTCCCTTHHHHHHHHHHHHH
T ss_pred             EEEEeccCCcccchhhhcccchhHHHHHHHHHHHHHHH
Confidence            799999986543 3333  3333333334444343333

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=92.07  E-value=0.23  Score=41.36  Aligned_cols=103  Identities=12%  Similarity=0.128  Sum_probs=67.8

Q ss_pred             CeEEEeEeeecCceEEEEEEEcC-------CCcEEEEEEeec-cchHHHHHHHHHHHhcCCCCcceeeeeEEEcCCCcee
Q 025443          126 DYEVVRKVGRGKYSEVFEGINVN-------TNERCIIKILKP-VKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTP  197 (252)
Q Consensus       126 ~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vAvK~i~~-~~~~~~~~Ei~il~~l~~h~nIv~l~~~~~~~~~~~~  197 (252)
                      .+++ +.|+.|-.-.+|++....       ....|.+++.-. ...-...+|..+++.+..+.-.+++++++.  +    
T Consensus        44 ~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~--~----  116 (395)
T d1nw1a_          44 HLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFS--G----  116 (395)
T ss_dssp             GEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T----
T ss_pred             ceEE-EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcchhhHHHHHHHHHHHHHhCCCCCeEEEEcC--C----
Confidence            4444 678889999999998743       234566666542 223446689999999874433457777763  2    


Q ss_pred             EEEecCCCCCCHHhHccCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 025443          198 SLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKVMSIFIRWST  240 (252)
Q Consensus       198 ~lV~E~~~gg~L~~~l~~l~~~~~~~i~~qi~~aL~yLH~~~I  240 (252)
                      .+||||++|..|...     ....-.+..++++.|.-+|+..+
T Consensus       117 g~I~efi~g~~l~~~-----d~~~~~~~~~iA~~La~lH~~~~  154 (395)
T d1nw1a_         117 GRLEEYIPSRPLSCH-----EISLAHMSTKIAKRVAKVHQLEV  154 (395)
T ss_dssp             EEEECCCCEEECCTT-----GGGSHHHHHHHHHHHHHHTTCCC
T ss_pred             ceEEEEeccccCChh-----hccchhhhHHHHHHHHHHhhccc
Confidence            589999997544321     11122577788888899998654

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=81.26  E-value=1.3  Score=35.43  Aligned_cols=88  Identities=14%  Similarity=0.171  Sum_probs=57.1

Q ss_pred             eEEEEEEEcCCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcce--eee-----eEEEcCCCceeEEEecCCCCCCH
Q 025443          139 SEVFEGINVNTNERCIIKILKPV--KKKKIKREIKILQNLCGGPNVV--KLL-----DIVRDQHSKTPSLIFEYVNSTDF  209 (252)
Q Consensus       139 g~V~~~~~~~~~~~vAvK~i~~~--~~~~~~~Ei~il~~l~~h~nIv--~l~-----~~~~~~~~~~~~lV~E~~~gg~L  209 (252)
                      -.||++.. .+|..+++|+.++.  ..+++..|...+..|. ..+|.  ...     ..+...  ...+.++++++|..+
T Consensus        36 N~vy~v~~-~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~-~~gipv~~p~~~~g~~~~~~~--~~~~~l~~~~~G~~~  111 (325)
T d1zyla1          36 NRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLV-NDEVPVAAPVAFNGQTLLNHQ--GFYFAVFPSVGGRQF  111 (325)
T ss_dssp             SEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHH-HTTCSBCCCCCBTTBSCEEET--TEEEEEEECCCCEEC
T ss_pred             ceeEEEEc-CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHH-hcCCCCCCceecCCCeeeeee--eEEEEEEeecCCcCC
Confidence            67999977 57888999999875  3577889999998876 32222  111     122223  337899999987543


Q ss_pred             HhHccCCCHHHHHHHHHHHHHHHHHHHHC
Q 025443          210 KVLYPTLTDYDIRYYIYELLKVMSIFIRW  238 (252)
Q Consensus       210 ~~~l~~l~~~~~~~i~~qi~~aL~yLH~~  238 (252)
                          ...+..    .+.++.+.|.-||..
T Consensus       112 ----~~~~~~----~~~~lG~~LA~lH~~  132 (325)
T d1zyla1         112 ----EADNID----QMEAVGRYLGRMHQT  132 (325)
T ss_dssp             ----CSSCHH----HHHHHHHHHHHHHHH
T ss_pred             ----CCCCHH----HHHHHHHHHHHHHhh
Confidence                223333    455666777777763