Your job contains 1 sequence.
>025444
MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLS
AVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKL
KRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVLGPFVMDY
YEINDWDDCSDYSDGSEYLAWEFLAGEMGDYDDDDEIYEGMWDDEGRLEELELRFYDGIE
EDAGIYGWPPSP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025444
(252 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2122308 - symbol:FBW2 "AT4G08980" species:3702... 725 1.1e-71 1
TAIR|locus:2115949 - symbol:AT4G05460 "AT4G05460" species... 198 7.7e-16 1
TAIR|locus:2174398 - symbol:SKIP1 "SKP1 interacting partn... 186 2.0e-14 1
TAIR|locus:2118736 - symbol:AT4G30640 "AT4G30640" species... 137 3.4e-07 1
TAIR|locus:2140715 - symbol:AT4G03630 "AT4G03630" species... 133 3.4e-07 1
UNIPROTKB|Q58DG6 - symbol:FBXL20 "F-box/LRR-repeat protei... 133 2.2e-06 1
UNIPROTKB|Q96IG2 - symbol:FBXL20 "F-box/LRR-repeat protei... 133 2.2e-06 1
MGI|MGI:1919444 - symbol:Fbxl20 "F-box and leucine-rich r... 133 2.2e-06 1
TAIR|locus:1005716270 - symbol:AT4G05497 "AT4G05497" spec... 126 4.4e-06 1
UNIPROTKB|F1PWK1 - symbol:FBXL2 "Uncharacterized protein"... 130 4.8e-06 1
TAIR|locus:2115979 - symbol:AT4G05490 "AT4G05490" species... 126 7.9e-06 1
UNIPROTKB|Q9UKC9 - symbol:FBXL2 "F-box/LRR-repeat protein... 126 1.5e-05 1
UNIPROTKB|Q5R3Z8 - symbol:FBXL2 "F-box/LRR-repeat protein... 126 1.5e-05 1
MGI|MGI:1919429 - symbol:Fbxl2 "F-box and leucine-rich re... 120 7.4e-05 1
RGD|1562243 - symbol:Fbxl2 "F-box and leucine-rich repeat... 117 0.00017 1
UNIPROTKB|F1NHD2 - symbol:FBXL2 "Uncharacterized protein"... 117 0.00017 1
UNIPROTKB|A6H779 - symbol:FBXL2 "F-box/LRR-repeat protein... 115 0.00028 1
>TAIR|locus:2122308 [details] [associations]
symbol:FBW2 "AT4G08980" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009737 "response
to abscisic acid stimulus" evidence=IMP] [GO:0010608
"posttranscriptional regulation of gene expression" evidence=IMP]
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
PROSITE:PS50181 UniPathway:UPA00143 GO:GO:0009737 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016567 GO:GO:0010629
EMBL:AL161513 EMBL:AF128396 GO:GO:0010608 EMBL:BT002431
EMBL:BT008715 EMBL:AK317222 EMBL:AY084585 IPI:IPI00545019
PIR:F85090 RefSeq:NP_001078359.1 RefSeq:NP_001154215.1
RefSeq:NP_567343.1 RefSeq:NP_849346.1 RefSeq:NP_974523.1
UniGene:At.27697 ProteinModelPortal:Q9ZPE4 SMR:Q9ZPE4 IntAct:Q9ZPE4
STRING:Q9ZPE4 EnsemblPlants:AT4G08980.1 EnsemblPlants:AT4G08980.2
EnsemblPlants:AT4G08980.3 EnsemblPlants:AT4G08980.4
EnsemblPlants:AT4G08980.5 GeneID:826476 KEGG:ath:AT4G08980
TAIR:At4g08980 eggNOG:NOG274710 HOGENOM:HOG000239506
InParanoid:Q9ZPE4 OMA:RVCKSWS PhylomeDB:Q9ZPE4
ProtClustDB:CLSN2689382 Genevestigator:Q9ZPE4 Uniprot:Q9ZPE4
Length = 317
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 150/256 (58%), Positives = 184/256 (71%)
Query: 1 MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLS 60
M+EMLI RS+GSLRKL V+GL ND +FS IA++AGSL+TL++PRS +++S V +A +LS
Sbjct: 72 MLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSGVVNVAEKLS 131
Query: 61 AVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKL 120
++TFLDLSYC KIG A++AIGKHCK L CRNMHPLD A +S DDEA AIA+TMPKL
Sbjct: 132 SLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAYAIANTMPKL 191
Query: 121 KRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVLGPFVMDY 180
KRLE+AYH +STE VLKILS C LEFL+LRGCWDV+LD+KF K FP++KVLGP V+ +
Sbjct: 192 KRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMKVLGPRVIGF 251
Query: 181 YE-INDWDDC-SDY-SDGSEYLAWEFLAXXXXXXXXXXXXXXXXWDDEGRXXXXXXRFY- 236
Y+ INDW+DC SDY SDGS+YLAWEF WDD FY
Sbjct: 252 YDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEFEHG-WDDN---------FYA 301
Query: 237 DGIEEDAGIYGWPPSP 252
+ D + WPPSP
Sbjct: 302 ENAVLDMEPHIWPPSP 317
>TAIR|locus:2115949 [details] [associations]
symbol:AT4G05460 "AT4G05460" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 EMBL:AL161503
HOGENOM:HOG000239019 EMBL:BT003081 EMBL:AY087774 EMBL:AK227360
IPI:IPI00546408 PIR:F85068 RefSeq:NP_567294.1 UniGene:At.48830
UniGene:At.66629 ProteinModelPortal:Q9M0U9 SMR:Q9M0U9 IntAct:Q9M0U9
STRING:Q9M0U9 PaxDb:Q9M0U9 PRIDE:Q9M0U9 EnsemblPlants:AT4G05460.1
GeneID:825896 KEGG:ath:AT4G05460 TAIR:At4g05460 eggNOG:NOG251781
InParanoid:Q9M0U9 OMA:CFRLNER PhylomeDB:Q9M0U9
ProtClustDB:CLSN2917517 Genevestigator:Q9M0U9 Uniprot:Q9M0U9
Length = 302
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 57/174 (32%), Positives = 92/174 (52%)
Query: 1 MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRL 59
M + RS G L + + + + IA + +L++LRL R S+++D + +L
Sbjct: 81 MCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKL 140
Query: 60 SAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPK 119
+ L+LSYCS +L +G+ C + L N HP + DD+A AIA TMPK
Sbjct: 141 P-LEELELSYCS-FSVESLRVVGQCCLNMKTLKLNKHP-----QKENDDDALAIAETMPK 193
Query: 120 LKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVL 173
L+ L++ + +S + IL +C+ LE LDLR C++V L K F ++KV+
Sbjct: 194 LRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVV 247
>TAIR|locus:2174398 [details] [associations]
symbol:SKIP1 "SKP1 interacting partner 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA]
InterPro:IPR001810 PROSITE:PS50181 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0019005 EMBL:AB013396
HOGENOM:HOG000242674 EMBL:AF263377 EMBL:AK229464 EMBL:BT026067
IPI:IPI00521503 RefSeq:NP_568870.1 UniGene:At.7657
ProteinModelPortal:Q9FDX1 SMR:Q9FDX1 IntAct:Q9FDX1 STRING:Q9FDX1
PaxDb:Q9FDX1 PRIDE:Q9FDX1 EnsemblPlants:AT5G57900.1 GeneID:835901
KEGG:ath:AT5G57900 TAIR:At5g57900 eggNOG:NOG287916
InParanoid:Q9FDX1 OMA:ERYGHWR PhylomeDB:Q9FDX1
ProtClustDB:CLSN2689687 Genevestigator:Q9FDX1 Uniprot:Q9FDX1
Length = 300
Score = 186 (70.5 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 1 MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRS-EMSDSIVAQIAGRL 59
M+ ++ S G L K+ V +D S A+ +LQ L + S ++D+ + +IA R
Sbjct: 79 MLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRC 137
Query: 60 SAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNM------H----PLDTADKLSQDD- 108
++ LD+SYC +I L IG++C L +L RN+ H P + D QD
Sbjct: 138 RSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQDGD 197
Query: 109 -EANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNF 167
EA+AI M L+ LE+ + +S + + I C LE+LDL GC V L + + N
Sbjct: 198 TEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGC--VHLSSRDITSNV 255
Query: 168 PNLKVL 173
LK L
Sbjct: 256 SRLKWL 261
>TAIR|locus:2118736 [details] [associations]
symbol:AT4G30640 "AT4G30640" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS50181 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161577 IPI:IPI00543230 PIR:E85358
RefSeq:NP_567849.1 UniGene:At.54559 ProteinModelPortal:Q9M096
SMR:Q9M096 EnsemblPlants:AT4G30640.1 GeneID:829187
KEGG:ath:AT4G30640 TAIR:At4g30640 eggNOG:NOG330723
HOGENOM:HOG000242674 InParanoid:Q9M096 OMA:SELTREC PhylomeDB:Q9M096
ProtClustDB:CLSN2917637 Genevestigator:Q9M096 Uniprot:Q9M096
Length = 301
Score = 137 (53.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 51/184 (27%), Positives = 86/184 (46%)
Query: 5 LITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVT 63
++ RS G L ++ + + S AE +L+ L + ++D+ + +IA +
Sbjct: 95 VVDRSEGGLTEIRIRHC-TERSLSYAAERCPNLEVLWIKNCPNVTDASMEKIAMNCPNLR 153
Query: 64 FLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHP-----LDTA----DKLSQ-----DDE 109
LD+SY I +L +G+ C+ L +L RN+ P L T D L+ + E
Sbjct: 154 ELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTIVAPLDYLATFPRYGNIE 213
Query: 110 ANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPN 169
A I M +LK LE+ Y ++ + + C+ LE++DLRGC + D + N
Sbjct: 214 ARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGCISLTRSD--INTNTSG 271
Query: 170 LKVL 173
LK L
Sbjct: 272 LKNL 275
>TAIR|locus:2140715 [details] [associations]
symbol:AT4G03630 "AT4G03630" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AC005142
EMBL:AL161497 HOGENOM:HOG000239019 eggNOG:KOG1947 EMBL:DQ056642
IPI:IPI00531603 PIR:A85046 RefSeq:NP_192272.1 UniGene:At.54122
ProteinModelPortal:Q9SY41 SMR:Q9SY41 EnsemblPlants:AT4G03630.1
GeneID:825663 KEGG:ath:AT4G03630 TAIR:At4g03630 InParanoid:Q9SY41
OMA:ELEISHG PhylomeDB:Q9SY41 ArrayExpress:Q9SY41
Genevestigator:Q9SY41 Uniprot:Q9SY41
Length = 220
Score = 133 (51.9 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 44/154 (28%), Positives = 73/154 (47%)
Query: 6 ITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSI-VAQIAGRLSAVTF 64
+ S G ++ + D + + IA+ + +L+ L L + + + + A +L +
Sbjct: 33 VALSQGGCVEINIEHFGTDSLLTYIADRSSNLRHLGLAKCDQITGMGLFTEAMKLPLLED 92
Query: 65 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 124
L+LSYC I LEAIG C L L N + D +A IA MP+L+ L+
Sbjct: 93 LELSYCL-IKGKNLEAIGFACLHLKTLKLNCQGFKFPG-FTYDHDALGIAKRMPELRCLQ 150
Query: 125 MAYHVISTEIVLKILSSCALLEFLDLRGCWDVKL 158
+ + +S + I C LE LDLR C+++ L
Sbjct: 151 LFGNRVSDVGLNAIFDGCPHLEHLDLRQCFNINL 184
>UNIPROTKB|Q58DG6 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 eggNOG:NOG300245 KO:K10268 HOGENOM:HOG000230659
HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9 EMBL:BT021631 EMBL:BC133345
IPI:IPI00718197 IPI:IPI00884875 RefSeq:NP_001030268.1
UniGene:Bt.20361 ProteinModelPortal:Q58DG6 SMR:Q58DG6 PRIDE:Q58DG6
Ensembl:ENSBTAT00000011020 GeneID:511007 KEGG:bta:511007 CTD:84961
OMA:CAHDRLE NextBio:20869722 Uniprot:Q58DG6
Length = 436
Score = 133 (51.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 50/176 (28%), Positives = 82/176 (46%)
Query: 3 EMLIT--RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 57
E LIT R L+ LC SG N D + + + +N L+ L + R S+++D +A
Sbjct: 237 EGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLAR 296
Query: 58 RLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM 117
+ +DL C +I L + HC L VL + L T D + N A
Sbjct: 297 NCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRH--LGNG-ACAH 353
Query: 118 PKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 172
+L+ +E+ + T+ L+ L SC LE ++L C + + K ++ + PN+KV
Sbjct: 354 DQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKV 409
>UNIPROTKB|Q96IG2 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 InterPro:IPR006553 SMART:SM00367 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:DQ223959 EMBL:AK291844 EMBL:BC007557
IPI:IPI00174757 IPI:IPI00655936 RefSeq:NP_001171835.1
RefSeq:NP_116264.2 UniGene:Hs.462946 ProteinModelPortal:Q96IG2
SMR:Q96IG2 STRING:Q96IG2 PhosphoSite:Q96IG2 DMDM:38503141
PaxDb:Q96IG2 PRIDE:Q96IG2 DNASU:84961 Ensembl:ENST00000264658
Ensembl:ENST00000394294 Ensembl:ENST00000583610 GeneID:84961
KEGG:hsa:84961 UCSC:uc002hrt.3 UCSC:uc010cvu.3
GeneCards:GC17M037409 HGNC:HGNC:24679 MIM:609086 neXtProt:NX_Q96IG2
PharmGKB:PA134976410 InParanoid:Q96IG2 PhylomeDB:Q96IG2
GenomeRNAi:84961 NextBio:75475 Bgee:Q96IG2 CleanEx:HS_FBXL20
Genevestigator:Q96IG2 GermOnline:ENSG00000108306 Uniprot:Q96IG2
Length = 436
Score = 133 (51.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 50/176 (28%), Positives = 82/176 (46%)
Query: 3 EMLIT--RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 57
E LIT R L+ LC SG N D + + + +N L+ L + R S+++D +A
Sbjct: 237 EGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLAR 296
Query: 58 RLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM 117
+ +DL C +I L + HC L VL + L T D + N A
Sbjct: 297 NCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRH--LGNG-ACAH 353
Query: 118 PKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 172
+L+ +E+ + T+ L+ L SC LE ++L C + + K ++ + PN+KV
Sbjct: 354 DQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKV 409
>MGI|MGI:1919444 [details] [associations]
symbol:Fbxl20 "F-box and leucine-rich repeat protein 20"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1919444 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:AL591209 EMBL:AL591205 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:EF649694 EMBL:AK012109 EMBL:AK036217
EMBL:AK144786 EMBL:AK220232 IPI:IPI00605645 IPI:IPI00874641
IPI:IPI00954305 RefSeq:NP_082425.1 UniGene:Mm.218350
ProteinModelPortal:Q9CZV8 SMR:Q9CZV8 IntAct:Q9CZV8 STRING:Q9CZV8
PhosphoSite:Q9CZV8 PaxDb:Q9CZV8 PRIDE:Q9CZV8
Ensembl:ENSMUST00000103143 GeneID:72194 KEGG:mmu:72194
UCSC:uc007lfm.1 UCSC:uc009vah.1 InParanoid:Q9CZV8 NextBio:335667
Bgee:Q9CZV8 CleanEx:MM_FBXL20 Genevestigator:Q9CZV8
GermOnline:ENSMUSG00000020883 Uniprot:Q9CZV8
Length = 436
Score = 133 (51.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 50/176 (28%), Positives = 82/176 (46%)
Query: 3 EMLIT--RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 57
E LIT R L+ LC SG N D + + + +N L+ L + R S+++D +A
Sbjct: 237 EGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLAR 296
Query: 58 RLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM 117
+ +DL C +I L + HC L VL + L T D + N A
Sbjct: 297 NCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRH--LGNG-ACAH 353
Query: 118 PKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 172
+L+ +E+ + T+ L+ L SC LE ++L C + + K ++ + PN+KV
Sbjct: 354 DQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKV 409
>TAIR|locus:1005716270 [details] [associations]
symbol:AT4G05497 "AT4G05497" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q13309
HOGENOM:HOG000239019 EMBL:AF147263 IPI:IPI00516725
RefSeq:NP_849530.1 UniGene:At.54168 ProteinModelPortal:Q9S9V8
SMR:Q9S9V8 PRIDE:Q9S9V8 EnsemblPlants:AT4G05497.1 GeneID:830176
KEGG:ath:AT4G05497 TAIR:At4g05497 eggNOG:NOG252528
InParanoid:Q9S9V8 OMA:NAILEGC PhylomeDB:Q9S9V8
ProtClustDB:CLSN2918307 Genevestigator:Q9S9V8 Uniprot:Q9S9V8
Length = 246
Score = 126 (49.4 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 45/158 (28%), Positives = 75/158 (47%)
Query: 9 SSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSE--MSDSIVAQIAGRLSAVTFLD 66
S G L ++ + L N + IA+ + +L+ L + +S +V + A +L + LD
Sbjct: 94 SQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVV-EAAMKLPLLEELD 152
Query: 67 LSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMA 126
++Y S I L+ +G+ C L L N T D D A AIA TMP L+ L++
Sbjct: 153 ITYKSSIREQELKVVGQSCPNLRTLKLNC----TGDVKCCDKVALAIAETMPGLRHLQLF 208
Query: 127 YHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 164
+ +S + IL C L+ L L C ++ + +K
Sbjct: 209 RNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246
>UNIPROTKB|F1PWK1 [details] [associations]
symbol:FBXL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 OMA:LTENVFG
EMBL:AAEX03013456 Ensembl:ENSCAFT00000007462 Uniprot:F1PWK1
Length = 422
Score = 130 (50.8 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 49/171 (28%), Positives = 78/171 (45%)
Query: 6 ITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAV 62
I R L+ LC+SG N D + +A N LQ L R S ++D+ +A +
Sbjct: 228 ICRGCHRLQALCLSGCSNLTDASLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDL 287
Query: 63 TFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKR 122
+DL C I L + HC L L + L T D + +N+ +L+
Sbjct: 288 EKMDLEECILITDSTLIQLSVHCPKLQALSLSHCELITDDGILH--LSNSTCGH-ERLRV 344
Query: 123 LEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 172
LE+ ++ T++ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 345 LELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 395
>TAIR|locus:2115979 [details] [associations]
symbol:AT4G05490 "AT4G05490" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF81383 EMBL:AL161503
IPI:IPI00523303 PIR:A85069 RefSeq:NP_567296.1 UniGene:At.54167
ProteinModelPortal:Q9M0U6 SMR:Q9M0U6 STRING:Q9M0U6 PRIDE:Q9M0U6
EnsemblPlants:AT4G05490.1 GeneID:825898 KEGG:ath:AT4G05490
TAIR:At4g05490 eggNOG:NOG282057 HOGENOM:HOG000239019
InParanoid:Q9M0U6 OMA:MEACCRH PhylomeDB:Q9M0U6
Genevestigator:Q9M0U6 Uniprot:Q9M0U6
Length = 307
Score = 126 (49.4 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 41/135 (30%), Positives = 72/135 (53%)
Query: 26 MFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHC 85
+ + +AE + +L+ LR+ +++ + + +L + L+L YCS I + IG+ C
Sbjct: 115 LLNYMAERSSNLRRLRVKGGQITSVGIFEAIVKLPLLEELELLYCS-IEEEHFKTIGQAC 173
Query: 86 KLLVVLCRNMHPLDTADKLSQ-DDEANAIASTMPKLKRLEMAYHVISTEIVLK-ILSSCA 143
L + + + L++ D++A AIA TMP L L++ + + T I L IL C
Sbjct: 174 PNL----KTLKLVGFWSHLNESDNDALAIADTMPGLLHLQLISNGL-TNIGLNAILDGCP 228
Query: 144 LLEFLDLRGCWDVKL 158
LE LDLR C+++ L
Sbjct: 229 HLECLDLRQCFNINL 243
>UNIPROTKB|Q9UKC9 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9606
"Homo sapiens" [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0016020 "membrane"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=TAS] [GO:0006508
"proteolysis" evidence=TAS] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 GO:GO:0005737 GO:GO:0019048
GO:GO:0016020 GO:GO:0006508 GO:GO:0006511 GO:GO:0004842
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245
KO:K10268 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
OMA:LTENVFG OrthoDB:EOG4KPTB9 EMBL:AF174589 EMBL:AF176518
EMBL:AF186273 EMBL:AK001438 EMBL:AK298967 EMBL:CR457121
EMBL:AC122176 EMBL:AC123900 EMBL:BC031556 EMBL:AL049953
IPI:IPI00296850 IPI:IPI00923623 PIR:T08680 RefSeq:NP_001165184.1
RefSeq:NP_036289.3 UniGene:Hs.475872 ProteinModelPortal:Q9UKC9
SMR:Q9UKC9 IntAct:Q9UKC9 MINT:MINT-1390736 STRING:Q9UKC9
DMDM:145559475 PRIDE:Q9UKC9 DNASU:25827 Ensembl:ENST00000484457
Ensembl:ENST00000507198 GeneID:25827 KEGG:hsa:25827 UCSC:uc003cfp.3
GeneCards:GC03P033293 HGNC:HGNC:13598 MIM:605652 neXtProt:NX_Q9UKC9
PharmGKB:PA28021 InParanoid:Q9UKC9 PhylomeDB:Q9UKC9 ChiTaRS:FBXL2
GenomeRNAi:25827 NextBio:47109 ArrayExpress:Q9UKC9 Bgee:Q9UKC9
CleanEx:HS_FBXL2 Genevestigator:Q9UKC9 GermOnline:ENSG00000153558
Uniprot:Q9UKC9
Length = 423
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/171 (28%), Positives = 77/171 (45%)
Query: 6 ITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAV 62
I R L+ LC+SG N D + + N LQ L R S ++D+ +A +
Sbjct: 229 ICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHEL 288
Query: 63 TFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKR 122
+DL C I L + HC L L + L T D + +N+ +L+
Sbjct: 289 EKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILH--LSNSTCGH-ERLRV 345
Query: 123 LEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 172
LE+ ++ T++ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 346 LELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 396
>UNIPROTKB|Q5R3Z8 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9601
"Pongo abelii" [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
InterPro:IPR006553 SMART:SM00367 KO:K10268 HSSP:Q13309 CTD:25827
HOGENOM:HOG000230659 HOVERGEN:HBG051586 EMBL:CR861354 EMBL:CR861462
RefSeq:NP_001127056.1 RefSeq:NP_001128909.1 UniGene:Pab.18445
UniGene:Pab.19645 ProteinModelPortal:Q5R3Z8 GeneID:100174084
GeneID:100189854 KEGG:pon:100174084 KEGG:pon:100189854
InParanoid:Q5R3Z8 Uniprot:Q5R3Z8
Length = 423
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/171 (28%), Positives = 77/171 (45%)
Query: 6 ITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAV 62
I R L+ LC+SG N D + + N LQ L R S ++D+ +A +
Sbjct: 229 ICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHEL 288
Query: 63 TFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKR 122
+DL C I L + HC L L + L T D + +N+ +L+
Sbjct: 289 EKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILH--LSNSTCGH-ERLRV 345
Query: 123 LEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 172
LE+ ++ T++ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 346 LELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 396
>MGI|MGI:1919429 [details] [associations]
symbol:Fbxl2 "F-box and leucine-rich repeat protein 2"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0006513 "protein monoubiquitination" evidence=IGI;IMP]
[GO:0016020 "membrane" evidence=ISO] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1919429 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245
KO:K10268 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
OrthoDB:EOG4KPTB9 EMBL:AK039010 EMBL:AK044693 EMBL:AK045742
EMBL:AK089994 IPI:IPI00112966 RefSeq:NP_848739.1 UniGene:Mm.386808
ProteinModelPortal:Q8BH16 SMR:Q8BH16 STRING:Q8BH16 PRIDE:Q8BH16
Ensembl:ENSMUST00000035090 Ensembl:ENSMUST00000117537 GeneID:72179
KEGG:mmu:72179 InParanoid:Q8BH16 OMA:TDNTLVQ NextBio:335633
Bgee:Q8BH16 CleanEx:MM_FBXL2 Genevestigator:Q8BH16
GermOnline:ENSMUSG00000032507 Uniprot:Q8BH16
Length = 423
Score = 120 (47.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 47/173 (27%), Positives = 77/173 (44%)
Query: 6 ITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAV 62
I R L+ LC+SG N D + + N LQ L R S ++D+ +A +
Sbjct: 229 ICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHEL 288
Query: 63 TFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM--PKL 120
+DL C I L + HC L L L + ++ + + +ST +L
Sbjct: 289 EKMDLEECVLITDSTLVQLSIHCPKLQALS-----LSHCELITDEGILHLSSSTCGHERL 343
Query: 121 KRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 172
+ LE+ ++ T+ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 344 RVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 396
>RGD|1562243 [details] [associations]
symbol:Fbxl2 "F-box and leucine-rich repeat protein 2"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0016020 "membrane"
evidence=IEA;ISO] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
RGD:1562243 GO:GO:0016020 GO:GO:0006511 GO:GO:0004842
GeneTree:ENSGT00700000104023 InterPro:IPR006553 SMART:SM00367
GO:GO:0006513 IPI:IPI00366732 Ensembl:ENSRNOT00000033126
NextBio:682654 Uniprot:F1M768
Length = 422
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 47/173 (27%), Positives = 76/173 (43%)
Query: 6 ITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAV 62
I R L+ LC+SG N D + + N LQ L R S ++D+ +A +
Sbjct: 228 ICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHDL 287
Query: 63 TFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM--PKL 120
+DL C I L + HC L L L + ++ + + +ST +L
Sbjct: 288 EKMDLEECVLITDSTLIQLSIHCPKLQALS-----LSHCELITDEGILHLSSSTCGHERL 342
Query: 121 KRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 172
+ LE+ ++ T+ L+ L +C LE L+L C V + K M+ P +KV
Sbjct: 343 RVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPRVKV 395
>UNIPROTKB|F1NHD2 [details] [associations]
symbol:FBXL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 OMA:LTENVFG
EMBL:AADN02001289 IPI:IPI00581819 Ensembl:ENSGALT00000019534
Uniprot:F1NHD2
Length = 423
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 46/171 (26%), Positives = 79/171 (46%)
Query: 6 ITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAV 62
I R L+ LCVSG N D + + N L+ L R S+++D+ +A +
Sbjct: 229 ICRGCHRLQSLCVSGCCNLTDASLTALGLNCPRLKILEAARCSQLTDAGFTLLARNCHEL 288
Query: 63 TFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKR 122
+DL C I L + HC L L + L T D + +N+ +L+
Sbjct: 289 EKMDLEECVLITDSTLIQLSIHCPKLQALSLSHCELITDDGILH--LSNSTCGH-ERLQV 345
Query: 123 LEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 172
LE+ ++ T++ L+ L +C LE ++L C V + K ++ + P++KV
Sbjct: 346 LELDNCLLITDVTLEHLENCHNLERIELYDCQQVTRAGIKRIRAHRPHVKV 396
>UNIPROTKB|A6H779 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=ISS] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 GO:GO:0016020 GO:GO:0006511
GO:GO:0004842 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245 KO:K10268
EMBL:BC146145 IPI:IPI00854546 RefSeq:NP_001092623.1
UniGene:Bt.54599 Ensembl:ENSBTAT00000005160 GeneID:616212
KEGG:bta:616212 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
InParanoid:A6H779 OMA:LTENVFG OrthoDB:EOG4KPTB9 NextBio:20900019
Uniprot:A6H779
Length = 423
Score = 115 (45.5 bits), Expect = 0.00028, P = 0.00028
Identities = 46/171 (26%), Positives = 77/171 (45%)
Query: 6 ITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAV 62
+ R L+ LC+SG + D + +A N LQ L R S ++D+ +A +
Sbjct: 229 LCRGCPRLQALCLSGCGSLTDASLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDL 288
Query: 63 TFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKR 122
+DL C I L + HC L L + L T D + +N+ +L+
Sbjct: 289 EKMDLEECILITDRTLTQLSIHCPKLQALSLSHCELITDDGILH--LSNSPCGH-ERLRV 345
Query: 123 LEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 172
LE+ ++ T++ L+ L C LE L+L C V + K M+ P+++V
Sbjct: 346 LELDNCLLITDVALEHLEHCRGLERLELYDCQQVTRAGIKRMRAQLPHVRV 396
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 252 230 0.00083 113 3 11 22 0.39 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 601 (64 KB)
Total size of DFA: 194 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.85u 0.10s 17.95t Elapsed: 00:00:01
Total cpu time: 17.85u 0.10s 17.95t Elapsed: 00:00:01
Start: Fri May 10 09:05:04 2013 End: Fri May 10 09:05:05 2013