BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025444
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZPE4|FBW2_ARATH F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1
Length = 317
Score = 295 bits (754), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 155/256 (60%), Positives = 193/256 (75%), Gaps = 14/256 (5%)
Query: 1 MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLS 60
M+EMLI RS+GSLRKL V+GL ND +FS IA++AGSL+TL++PRS +++S V +A +LS
Sbjct: 72 MLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSGVVNVAEKLS 131
Query: 61 AVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKL 120
++TFLDLSYC KIG A++AIGKHCK L CRNMHPLD A +S DDEA AIA+TMPKL
Sbjct: 132 SLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAYAIANTMPKL 191
Query: 121 KRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVLGPFVMDY 180
KRLE+AYH +STE VLKILS C LEFL+LRGCWDV+LD+KF K FP++KVLGP V+ +
Sbjct: 192 KRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMKVLGPRVIGF 251
Query: 181 YE-INDWDD-CSDY-SDGSEYLAWEFLA-GEMGDYDDDDEIYEGMWDDEGRLEELELRFY 236
Y+ INDW+D CSDY SDGS+YLAWEF G MG++ +D+ +E WDD E L
Sbjct: 252 YDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDE--FEHGWDDNFYAENAVL--- 306
Query: 237 DGIEEDAGIYGWPPSP 252
D + WPPSP
Sbjct: 307 -----DMEPHIWPPSP 317
>sp|Q9M0U9|SKI19_ARATH F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1
Length = 302
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 8/174 (4%)
Query: 1 MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRL 59
M + RS G L + + + + IA + +L++LRL R S+++D + +L
Sbjct: 81 MCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKL 140
Query: 60 SAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPK 119
+ L+LSYCS +L +G+ C + L N HP + DD+A AIA TMPK
Sbjct: 141 -PLEELELSYCS-FSVESLRVVGQCCLNMKTLKLNKHP-----QKENDDDALAIAETMPK 193
Query: 120 LKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVL 173
L+ L++ + +S + IL +C+ LE LDLR C++V L K F ++KV+
Sbjct: 194 LRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVV 247
>sp|Q9FDX1|SKIP1_ARATH F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1
Length = 300
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 16/186 (8%)
Query: 1 MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRS-EMSDSIVAQIAGRL 59
M+ ++ S G L K+ V +D S A+ +LQ L + S ++D+ + +IA R
Sbjct: 79 MLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRC 137
Query: 60 SAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMH----------PLDTADKLSQD-- 107
++ LD+SYC +I L IG++C L +L RN+ P + D QD
Sbjct: 138 RSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQDGD 197
Query: 108 DEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNF 167
EA+AI M L+ LE+ + +S + + I C LE+LDL GC V L + + N
Sbjct: 198 TEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGC--VHLSSRDITSNV 255
Query: 168 PNLKVL 173
LK L
Sbjct: 256 SRLKWL 261
>sp|Q9S9V9|FBL23_ARATH Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana
GN=FBL23 PE=4 SV=1
Length = 449
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 1 MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRS-EMSDSIVAQIAGRL 59
M + RS G L ++ + + + IA+ + +L++L L R ++D VA+ ++
Sbjct: 243 MCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKV 302
Query: 60 SAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPK 119
+ +L++SYC G +L IG+ C L L N P DD A AIA +MP+
Sbjct: 303 PLLEYLEVSYCLFSGE-SLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAIAESMPE 361
Query: 120 LKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVL 173
L+ L++ + ++ + + IL C LE LDLR C+++ L K F +K L
Sbjct: 362 LRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIKDL 415
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 107 DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKL 158
DDE AIA TMP+L+ L++ + ++ + IL +C L LDLR C+++ L
Sbjct: 19 DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINL 70
>sp|Q9M096|FBL19_ARATH Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana
GN=FBL19 PE=4 SV=1
Length = 301
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 5 LITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVT 63
++ RS G L ++ + + S AE +L+ L + ++D+ + +IA +
Sbjct: 95 VVDRSEGGLTEIRIRHC-TERSLSYAAERCPNLEVLWIKNCPNVTDASMEKIAMNCPNLR 153
Query: 64 FLDLSYCSKIGAPALEAIGKHCKLLVVLCRNM------------HPLDTADKLSQ--DDE 109
LD+SY I +L +G+ C+ L +L RN+ PLD + + E
Sbjct: 154 ELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTIVAPLDYLATFPRYGNIE 213
Query: 110 ANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDD 160
A I M +LK LE+ Y ++ + + C+ LE++DLRGC + D
Sbjct: 214 ARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGCISLTRSD 264
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 4 MLITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLS 60
+ I R L+ LC SG N D + + + +N L+ L + R S+++D +A
Sbjct: 240 ITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCH 299
Query: 61 AVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKL 120
+ +DL C +I L + HC L VL + L T D + A +L
Sbjct: 300 ELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNG---ACAHDQL 356
Query: 121 KRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKVLGPF 176
+ +E+ + T+ L+ L SC LE ++L C + + K ++ + PN+KV F
Sbjct: 357 EVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYF 413
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 1 MVEMLITRSSGSLRKLCVSGL--HNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 57
+VE + R G LRKL + G D A+N +++ L L ++ +D+ ++
Sbjct: 81 VVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSK 140
Query: 58 RLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL-------------------CRNMHPL 98
S + LDL+ C+ I +L+A+ + C LL L C + L
Sbjct: 141 FCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKAL 200
Query: 99 DTADKLSQDDEA-NAIASTMPKLKRLEMAYHV-ISTEIVLKILSSCALLEFLDLRGCWDV 156
+DEA I + P+L L + + I+ E ++ I C L+ L GC ++
Sbjct: 201 FLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNI 260
Query: 157 KLDDKFMKG---NFPNLKVL 173
D + N P L++L
Sbjct: 261 T--DAILNALGQNCPRLRIL 278
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 4 MLITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLS 60
+ I R L+ LC SG N D + + + +N L+ L + R S+++D +A
Sbjct: 240 ITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCH 299
Query: 61 AVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKL 120
+ +DL C +I L + HC L VL + L T D + A +L
Sbjct: 300 ELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNG---ACAHDQL 356
Query: 121 KRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKVLGPF 176
+ +E+ + T+ L+ L SC LE ++L C + + K ++ + PN+KV F
Sbjct: 357 EVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYF 413
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 1 MVEMLITRSSGSLRKLCVSGL--HNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 57
+VE + R G LRKL + G D A+N +++ L L ++ +D+ ++
Sbjct: 81 VVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSK 140
Query: 58 RLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL-------------------CRNMHPL 98
S + LDL+ C+ I +L+A+ + C LL L C + L
Sbjct: 141 FCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKAL 200
Query: 99 DTADKLSQDDEA-NAIASTMPKLKRLEMAYHV-ISTEIVLKILSSCALLEFLDLRGCWDV 156
+DEA I + P+L L + + I+ E ++ I C L+ L GC ++
Sbjct: 201 FLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNI 260
Query: 157 KLDDKFMKG---NFPNLKVL 173
D + N P L++L
Sbjct: 261 T--DAILNALGQNCPRLRIL 278
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 4 MLITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLS 60
+ I R L+ LC SG N D + + + +N L+ L + R S+++D +A
Sbjct: 240 ITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCH 299
Query: 61 AVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKL 120
+ +DL C +I L + HC L VL + L T D + A +L
Sbjct: 300 ELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNG---ACAHDQL 356
Query: 121 KRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKVLGPF 176
+ +E+ + T+ L+ L SC LE ++L C + + K ++ + PN+KV F
Sbjct: 357 EVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYF 413
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 1 MVEMLITRSSGSLRKLCVSGL--HNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 57
+VE + R G LRKL + G D A+N +++ L L ++ +D+ ++
Sbjct: 81 VVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSK 140
Query: 58 RLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL-------------------CRNMHPL 98
S + LDL+ C+ I +L+A+ + C LL L C + L
Sbjct: 141 FCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKAL 200
Query: 99 DTADKLSQDDEA-NAIASTMPKLKRLEMAYHV-ISTEIVLKILSSCALLEFLDLRGCWDV 156
+DEA I + P+L L + + I+ E ++ I C L+ L GC ++
Sbjct: 201 FLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNI 260
Query: 157 KLDDKFMKG---NFPNLKVL 173
D + N P L++L
Sbjct: 261 T--DAILNALGQNCPRLRIL 278
>sp|Q9S9V8|FBL9_ARATH Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9
PE=4 SV=1
Length = 246
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 9 SSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTFLDL 67
S G L ++ + L N + IA+ + +L+ L + + + V + A +L + LD+
Sbjct: 94 SQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDI 153
Query: 68 SYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAY 127
+Y S I L+ +G+ C L L N T D D A AIA TMP L+ L++
Sbjct: 154 TYKSSIREQELKVVGQSCPNLRTLKLNC----TGDVKCCDKVALAIAETMPGLRHLQLFR 209
Query: 128 HVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 164
+ +S + IL C L+ L L C ++ + +K
Sbjct: 210 NGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246
>sp|Q9M0U6|FBL22_ARATH Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana
GN=FBL22 PE=4 SV=1
Length = 307
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 26 MFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHC 85
+ + +AE + +L+ LR+ +++ + + +L + L+L YCS I + IG+ C
Sbjct: 115 LLNYMAERSSNLRRLRVKGGQITSVGIFEAIVKLPLLEELELLYCS-IEEEHFKTIGQAC 173
Query: 86 KLLVVLCRNMHPLDTADKLSQ-DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCAL 144
L + + + L++ D++A AIA TMP L L++ + ++ + IL C
Sbjct: 174 PNL----KTLKLVGFWSHLNESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPH 229
Query: 145 LEFLDLRGCWDVKL 158
LE LDLR C+++ L
Sbjct: 230 LECLDLRQCFNINL 243
>sp|Q9M0U7|FB221_ARATH Putative F-box protein At4g05475 OS=Arabidopsis thaliana
GN=At4g05475 PE=4 SV=2
Length = 309
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 1 MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSE-MSDSIVAQIAGRL 59
M ++ S G L ++ + +D + S I + + +L++L + E M++ V +L
Sbjct: 99 MCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEKL 158
Query: 60 SAVTFLDLSYCS-KIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQ---------DDE 109
+ L + + S K+ L+AIG C L L N + A +SQ DD+
Sbjct: 159 PLLETLVIFHSSIKLD---LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDD 215
Query: 110 ANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALL-EFLDLRGCWDVKLDDKFMKGNFP 168
A AIA +MPKL+ L++ + ++ + IL C L E LD+R C+++ L K
Sbjct: 216 ALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRCMK 275
Query: 169 NLKVL 173
+K L
Sbjct: 276 RIKEL 280
>sp|Q9M0U8|FBL21_ARATH Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana
GN=FBL21 PE=4 SV=1
Length = 304
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 78 LEAIGKHCKLLVVLCRNM-------------HPLDTADKLSQDDEANAIASTMPKLKRLE 124
L+AIG C L L N + LD L DD+A AIA +MPKL L+
Sbjct: 181 LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQ 240
Query: 125 MAYHVISTEIVLKILSSCALLEFLDLRGCWDVKL 158
+ + ++ + IL C LE LD+R C+ + L
Sbjct: 241 LMANRLTNTGLNAILDGCPHLEHLDVRKCFRISL 274
>sp|Q8J2J3|AMN1_PICAD Antagonist of mitotic exit network protein 1 OS=Pichia angusta
(strain ATCC 26012 / NRRL Y-7560 / DL-1) GN=AMN1 PE=3
SV=1
Length = 511
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 34 AGSLQTLRLPRSEMSDSI-VAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLC 92
L+ L LP S++ D + + QIA + + LDL C I L AIG HC + L
Sbjct: 283 TAKLKKLVLPGSKVVDDVYLQQIAPLMPNLVHLDLRACEHITDAGLYAIGTHCPKIETLN 342
Query: 93 RNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKI-LSSCALLEFLDLR 151
H T L D + I + LK L +A +S I+ + LE L L
Sbjct: 343 CGRH---TKGILVTDASISHIVANC-NLKTLGVAGCGVSDAILWSLAYQKGHQLERLSLN 398
Query: 152 GCW---DVKLDDKFMKGNFPNLKVL 173
CW D + M FP L VL
Sbjct: 399 SCWRLTDAGISSVLMMDRFPRLAVL 423
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 24 DMMFSLIAENAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIG 82
D+ IA+ +L+ L + R E+ + + I ++T L L +C K+G AL AIG
Sbjct: 413 DIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIG 472
Query: 83 KHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMA 126
K C L + +++S D AIA P+L L+++
Sbjct: 473 KGCSL------QQLNVSGCNQIS-DAGITAIARGCPQLTHLDIS 509
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 65 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 124
L L YC +IG AL+ IGK CK L +L H +D + D +IA LK+L
Sbjct: 377 LALLYCQRIGNSALQEIGKGCKSLEIL----HLVDCSG--IGDIAMCSIAKGCRNLKKLH 430
Query: 125 MAY-HVISTEIVLKILSSCALLEFLDLRGCWDV 156
+ + I + ++ I C L L LR C V
Sbjct: 431 IRRCYEIGNKGIISIGKHCKSLTELSLRFCDKV 463
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 59/148 (39%), Gaps = 12/148 (8%)
Query: 12 SLRKLCVSGLHNDMMFSLIAENAGSLQTLRL-PRSEMSDSIVAQIAGRLSAVTFLDLSYC 70
+L+ CVS D+ F+ + E SL+ L L +D + I + L LS C
Sbjct: 273 NLKLQCVS--VTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDC 330
Query: 71 SKIGAPALEAIGKHCK-LLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAY-H 128
+ LEAI CK L V H + T AI + P+LK L + Y
Sbjct: 331 YFVSCKGLEAIAHGCKELERVEINGCHNIGTRG-------IEAIGKSCPRLKELALLYCQ 383
Query: 129 VISTEIVLKILSSCALLEFLDLRGCWDV 156
I + +I C LE L L C +
Sbjct: 384 RIGNSALQEIGKGCKSLEILHLVDCSGI 411
>sp|Q7SZ73|FXL15_XENLA F-box/LRR-repeat protein 15 OS=Xenopus laevis GN=fbxl15 PE=2 SV=1
Length = 292
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 23/156 (14%)
Query: 27 FSLIAENAGSLQTLRLPRSE--MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKH 84
FS + +N LQ L L ++D + I G+ +T+++L+ C ++ +L AI
Sbjct: 72 FSELLKNNTVLQKLDLQSCSDWLTDKELLPIIGQNHHLTYINLNSCGQLTRQSLVAISLS 131
Query: 85 CKLLVVLC-------------------RNMHPLD-TADKLSQDDEANAIASTMPKLKRLE 124
C L +C + + +D TA + +DD + + +LK L
Sbjct: 132 CPHLQNICLGHCDWVDCLSMRSLADHCKCLEAIDLTACRQLKDDAISYLVQKSTRLKSLS 191
Query: 125 MAYHV-ISTEIVLKILSSCALLEFLDLRGCWDVKLD 159
+A + IS V + SC LE LDL GC VK D
Sbjct: 192 LAVNANISDIAVEETAKSCRDLEHLDLTGCLRVKND 227
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 1 MVEMLITRSSGSLRKLCVSGL--HNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 57
+VE + R G LRKL + G D A+N +++ L L ++++DS ++
Sbjct: 68 VVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSR 127
Query: 58 RLSAVTFLDLSYCSKIGAPALEAIGKHCK-------------------LLVVLCRNMHPL 98
S + LDL+ C I +L+ I + C+ LV CR + L
Sbjct: 128 FCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKAL 187
Query: 99 DTADKLSQDDEA-NAIASTMPKLKRLEM-AYHVISTEIVLKILSSCALLEFLDLRGCWDV 156
+DEA I + +L L + + I+ E V++I C L+ L L GC +
Sbjct: 188 LLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSN- 246
Query: 157 KLDDKFMKG---NFPNLKVL 173
L D + N P L++L
Sbjct: 247 -LTDASLTALGLNCPRLQIL 265
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 50/182 (27%)
Query: 45 SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLL---------------- 88
S ++D V QI + L LS CS + +L A+G +C L
Sbjct: 219 SRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGF 278
Query: 89 VVLCRNMHPLDTAD----KLSQDDEANAIASTMPKLKRLEMAY----------------- 127
+L RN H L+ D L D ++ PKL+ L +++
Sbjct: 279 TLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTC 338
Query: 128 ------------HVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKVLG 174
++ T++ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 339 GHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHA 398
Query: 175 PF 176
F
Sbjct: 399 YF 400
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 1 MVEMLITRSSGSLRKLCVSGL--HNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 57
+VE + R G LRKL + G D A+N +++ L L ++++DS ++
Sbjct: 68 VVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSR 127
Query: 58 RLSAVTFLDLSYCSKIGAPALEAIGKHCK-------------------LLVVLCRNMHPL 98
S + LDL+ C I +L+ I + C+ LV CR + L
Sbjct: 128 FCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKAL 187
Query: 99 DTADKLSQDDEA-NAIASTMPKLKRLEM-AYHVISTEIVLKILSSCALLEFLDLRGCWDV 156
+DEA I + +L L + + I+ E V++I C L+ L L GC +
Sbjct: 188 LLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSN- 246
Query: 157 KLDDKFMKG---NFPNLKVL 173
L D + N P L++L
Sbjct: 247 -LTDASLTALGLNCPRLQIL 265
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 50/182 (27%)
Query: 45 SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLL---------------- 88
S ++D V QI + L LS CS + +L A+G +C L
Sbjct: 219 SRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGF 278
Query: 89 VVLCRNMHPLDTAD----KLSQDDEANAIASTMPKLKRLEMAY----------------- 127
+L RN H L+ D L D ++ PKL+ L +++
Sbjct: 279 TLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTC 338
Query: 128 ------------HVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKVLG 174
++ T++ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 339 GHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHA 398
Query: 175 PF 176
F
Sbjct: 399 YF 400
>sp|P34284|YKK7_CAEEL Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis
elegans GN=C02F5.7 PE=4 SV=3
Length = 466
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 26 MFSLIAENAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKH 84
+F + + G+++ L L + +++D V IA +A+ +L +S C++I +L ++G+H
Sbjct: 244 VFGSVEAHMGAIKKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQH 303
Query: 85 CKLLVVL-------------------CRNMHPLDTAD-KLSQDDEANAIASTMPKLKRLE 124
L VL CR + LD D L D N++A+ L+ L
Sbjct: 304 SHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLANNCTALRELS 363
Query: 125 MAYHVISTEIVLKILSS 141
+++ + T+ ++ L+S
Sbjct: 364 LSHCELITDESIQNLAS 380
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Query: 34 AGSLQTLRLPRSE-MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLC 92
G L+ L L E + DS + R + L L C ++ + E +G++C L
Sbjct: 122 GGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKL---- 177
Query: 93 RNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAY-HVISTEIVLKILSSCALLEFLDLR 151
N L+ ++ D I P L L +++ I V ILS+C L+ L LR
Sbjct: 178 -NYLNLENCSSIT-DRAMKYIGDGCPNLSYLNISWCDAIQDRGVQIILSNCKSLDTLILR 235
Query: 152 GC 153
GC
Sbjct: 236 GC 237
>sp|A1A5X2|FBXL7_DANRE F-box/LRR-repeat protein 7 OS=Danio rerio GN=fbxl7 PE=2 SV=1
Length = 489
Score = 38.5 bits (88), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 112 AIASTMPKLKRLEMA-YHVISTEIVLKILSSCALLEFLDLRGCWDV 156
+A + P+L+RLE+A + +S E V +++S C LE LD+ GC V
Sbjct: 204 TVAQSCPELRRLEVAGCYNVSNEAVFEVVSRCPNLEHLDVSGCSKV 249
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 77/180 (42%), Gaps = 32/180 (17%)
Query: 6 ITRSSGSLRKLCVSGLHN---DMMFSLIAEN--------AGSLQTLRLPRSEMSDSIVAQ 54
+ +S LR+L V+G +N + +F +++ +G + + + ++
Sbjct: 205 VAQSCPELRRLEVAGCYNVSNEAVFEVVSRCPNLEHLDVSGCSKVTCISLTRDVSVKLSP 264
Query: 55 IAGRLSAVTFLDLSYCSKIGAPALEAIGKHC-------------------KLLVVLCRNM 95
+ G+ ++ FLD++ C + L I HC + LV+ C +
Sbjct: 265 LHGQQISIRFLDMTDCFALEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRFLVIYCPGV 324
Query: 96 HPLDTAD-KLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSS-CALLEFLDLRGC 153
L +D + D IA +L+ L +A+ T++ ++ ++ C+ L +L+ RGC
Sbjct: 325 RELSVSDCRFISDFGLREIAKLEGRLRYLSIAHCSRITDVGVRYVAKYCSRLRYLNARGC 384
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 37.4 bits (85), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 1 MVEMLITRSSGSLRKLCVSGL--HNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 57
+VE + R G LRKL + G D A+N +++ L L ++++DS ++
Sbjct: 68 VVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSR 127
Query: 58 RLSAVTFLDLSYCSKIGAPALEAIGKHCK-------------------LLVVLCRNMHPL 98
S + LDL+ C + +L+ I + C+ LV CR + L
Sbjct: 128 FCSKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKAL 187
Query: 99 DTADKLSQDDEA-NAIASTMPKLKRLEM-AYHVISTEIVLKILSSCALLEFLDLRGCWDV 156
+DEA I + +L L + + I+ + V++I C L+ L L GC +
Sbjct: 188 LLRGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSN- 246
Query: 157 KLDDKFMKG---NFPNLKVL 173
L D + N P L+VL
Sbjct: 247 -LTDASLTALGLNCPRLQVL 265
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 69/182 (37%), Gaps = 50/182 (27%)
Query: 45 SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVV-------------- 90
S ++D V QI + L LS CS + +L A+G +C L V
Sbjct: 219 SRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGF 278
Query: 91 --LCRNMHPLDTAD----KLSQDDEANAIASTMPKLKRLEMAY----------HVIS--- 131
L RN H L+ D L D ++ PKL+ L +++ H+ S
Sbjct: 279 TLLARNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHLSSSTC 338
Query: 132 ----------------TEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKVLG 174
T+ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 339 GHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHA 398
Query: 175 PF 176
F
Sbjct: 399 YF 400
>sp|Q6NW95|FXL15_DANRE F-box/LRR-repeat protein 15 OS=Danio rerio GN=fbxl15 PE=2 SV=2
Length = 296
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 45 SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLD-TADK 103
+++S + ++ + L L++C + + AL ++ HC +L LD TA +
Sbjct: 122 AQLSRRALVAVSLSCPRLQHLSLAHCEWVDSLALRSLADHCPML-------RSLDLTACR 174
Query: 104 LSQDDEANAIASTMPKLKRLEMAYHV-ISTEIVLKILSSCALLEFLDLRGCWDVK 157
+D +A P+L+ L +A + I+ V ++ C +E LDL GC V+
Sbjct: 175 QLKDPAVCYLAGKCPELRALSVAVNANITDTAVEEVAKKCREMERLDLTGCLRVR 229
>sp|Q9QZH7|FXL20_RAT F-box/LRR-repeat protein 20 OS=Rattus norvegicus GN=Fbxl20 PE=1
SV=1
Length = 276
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 24/180 (13%)
Query: 1 MVEMLITRSSGSLRKLCVSGL--HNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 57
+VE + R G LRKL + G D A+N +++ L L ++ +D+ ++
Sbjct: 81 VVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSK 140
Query: 58 RLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL-------------------CRNMHPL 98
S + LDL+ C+ I +L+A+ + C LL L C + L
Sbjct: 141 FCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKAL 200
Query: 99 DTADKLSQDDEA-NAIASTMPKLKRLEMAYHV-ISTEIVLKILSSCALLEFLDLRGCWDV 156
+DEA I + P+L L + + I+ E ++ I C L+ L GC ++
Sbjct: 201 FLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNI 260
>sp|Q0VD31|FBXL4_BOVIN F-box/LRR-repeat protein 4 OS=Bos taurus GN=FBXL4 PE=2 SV=1
Length = 621
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 24 DMMFSLIAENAGSLQTLRLPRSE-MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEA-I 81
D+ S+I L+TL L R + +++S +A++A + LDL +C P L++
Sbjct: 468 DVTASMIGAKCKKLRTLDLWRCKNITESGIAELASGCPLLEELDLGWC-----PTLQSST 522
Query: 82 GKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE-MAYHVISTEIVLKILS 140
G +L L TA++ D + +AS +L++L+ + ++S + K+L
Sbjct: 523 GCFARLARQLPNLQKLFLTANRSVCDTDIEELASNCTRLRQLDILGTRMVSPASLRKLLE 582
Query: 141 SCALLEFLDLRGCWDVKLDDKF---MKGNFPNLKVLGPFV 177
SC L LD+ C ++D++ + +FP + + F
Sbjct: 583 SCKDLSLLDVSFC--SQIDNRAVLELSASFPKVFIKKSFT 620
>sp|Q9LPL4|SKP2A_ARATH F-box protein SKP2A OS=Arabidopsis thaliana GN=SKP2A PE=1 SV=1
Length = 360
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 24 DMMFSLIAENAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIG 82
D IA + LQ L L +S +++D + +A +T L+LS C+ A+ +
Sbjct: 106 DNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLT 165
Query: 83 KHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAY-HVISTEIVLKILSS 141
+ C+ L VL L K D+ AI + +++ L + + IS + V+ +
Sbjct: 166 RFCRKLKVL-----NLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYG 220
Query: 142 CALLEFLDLRGCWDVKLDDKFMKGNF-PNLKVLGPFVMDYYEINDWDDCSDYSDGSEY-L 199
C L LDL GC + + ++ +L+ LG YY C + +D + Y L
Sbjct: 221 CPDLRTLDLCGCVLITDESVVALADWCVHLRSLGL----YY-------CRNITDRAMYSL 269
Query: 200 AWEFLAGEMGDYDDDDEIYEGMWDDEG 226
A + + G + + +G +D+EG
Sbjct: 270 AQSGVKNKPGSW---KSVKKGKYDEEG 293
>sp|Q9UJT9|FBXL7_HUMAN F-box/LRR-repeat protein 7 OS=Homo sapiens GN=FBXL7 PE=2 SV=1
Length = 491
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 112 AIASTMPKLKRLEMA-YHVISTEIVLKILSSCALLEFLDLRGCWDV 156
IA P+L+RLE++ + IS E V ++S C LE LD+ GC V
Sbjct: 206 TIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKV 251
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 6 ITRSSGSLRKLCVSGLHN---DMMFSLIA--------ENAGSLQTLRLPRSEMSDSIVAQ 54
I + LR+L VSG +N + +F +++ + +G + + + + ++
Sbjct: 207 IAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKVTCISLTREASIKLSP 266
Query: 55 IAGRLSAVTFLDLSYCSKIGAPALEAIGKHC-------------------KLLVVLCRNM 95
+ G+ ++ +LD++ C + L I HC + LV+ C ++
Sbjct: 267 LHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCASI 326
Query: 96 HPLDTAD-KLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSS-CALLEFLDLRGC 153
L +D + D IA +L+ L +A+ T++ ++ ++ C+ L +L+ RGC
Sbjct: 327 KELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVTDVGIRYVAKYCSKLRYLNARGC 386
Query: 154 WDVK-LDDKFMKGNFPNLKVL----GPFVMD 179
+ +++ N LK L P V D
Sbjct: 387 EGITDHGVEYLAKNCTKLKSLDIGKCPLVSD 417
>sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1
SV=2
Length = 990
Score = 36.2 bits (82), Expect = 0.23, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 62 VTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLK 121
+T LD S+CS++ L A C L+ L P +D LS + +P L
Sbjct: 686 LTSLDASFCSQLRDDCLSATTASCPLIESLVLMSCPSIGSDGLSS-------LNGLPNLT 738
Query: 122 RLEMAY-HVISTEIVLKILSSCALLEFLDLRGC---WDVKLDDKFMKGNFPNLKVL 173
L+++Y +++ E V K SC L+ L L+ C D L+ + +G P L+ L
Sbjct: 739 VLDLSYTFLMNLEPVFK---SCIQLKVLKLQACKYLTDSSLEPLYKEGALPALEEL 791
>sp|Q5BJ29|FBXL7_MOUSE F-box/LRR-repeat protein 7 OS=Mus musculus GN=Fbxl7 PE=1 SV=1
Length = 491
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 112 AIASTMPKLKRLEMA-YHVISTEIVLKILSSCALLEFLDLRGCWDV 156
IA P+L+RLE++ + IS E V ++S C LE LD+ GC V
Sbjct: 206 TIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKV 251
Score = 33.9 bits (76), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 6 ITRSSGSLRKLCVSGLHN---DMMFSLIA--------ENAGSLQTLRLPRSEMSDSIVAQ 54
I + LR+L VSG +N + +F +++ + +G + + + + ++
Sbjct: 207 IAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKVTCISLTREASIKLSP 266
Query: 55 IAGRLSAVTFLDLSYCSKIGAPALEAIGKHC-------------------KLLVVLCRNM 95
+ G+ ++ +LD++ C + L I HC + LV+ C ++
Sbjct: 267 LHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCTSI 326
Query: 96 HPLDTAD-KLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSS-CALLEFLDLRGC 153
L +D + D IA +L+ L +A+ T++ ++ ++ C+ L +L+ RGC
Sbjct: 327 KELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRITDVGIRYVAKYCSKLRYLNARGC 386
Query: 154 WDVK-LDDKFMKGNFPNLKVL----GPFVMD 179
+ +++ N LK L P V D
Sbjct: 387 EGITDHGVEYLAKNCTKLKSLDIGKCPLVSD 417
>sp|Q6FRM1|AMN1_CANGA Antagonist of mitotic exit network protein 1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=AMN1 PE=3 SV=1
Length = 511
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 37 LQTLRLPRSEM-SDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLV 89
L+ L LP +++ +DS + QI L + LDL C I + A+G HCK LV
Sbjct: 305 LEKLILPGNKLINDSYLIQICRYLPNLKVLDLRACDNITDAGIVAVGTHCKQLV 358
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 1 MVEMLITRSSGSLRKLCVSGL--HNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 57
+VE + R G LRKL + G D A+N +++ L L ++++DS ++
Sbjct: 68 VVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSR 127
Query: 58 RLSAVTFLDLSYCSKIGAPALEAIGKHCK-------------------LLVVLCRNMHPL 98
S + LDL+ C I +L+ I + C+ LV CR + L
Sbjct: 128 FCSKLKHLDLTSCVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRAL 187
Query: 99 DTADKLSQDDEA-NAIASTMPKLKRLEM-AYHVISTEIVLKILSSCALLEFLDLRGCWDV 156
+DEA I + +L L + + ++ + V+++ C L+ L L GC
Sbjct: 188 LLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGS- 246
Query: 157 KLDDKFMKG---NFPNLKVL 173
L D + N P L++L
Sbjct: 247 -LTDASLTALALNCPRLQIL 265
>sp|E6ZHJ8|FXL15_DICLA F-box/LRR-repeat protein 15 OS=Dicentrarchus labrax GN=fbxl15 PE=3
SV=1
Length = 292
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 38 QTLRLPRSEMSDSIV----AQIAGRLSAVTF--LDLSYCSKIGAPALEAIGKHCKLLVVL 91
Q L R +MS + + +A LS + L L++C + + +L ++ HC
Sbjct: 105 QNQHLQRVDMSGCVCLTRHSLVAVSLSCMHLQHLGLAHCEWVDSLSLRSLADHCG----- 159
Query: 92 CRNMHPLD-TADKLSQDDEANAIASTMPKLKRLEMAYHV-ISTEIVLKILSSCALLEFLD 149
+ +D TA + +DD +A KL+ L +A + I+ E V ++ +C LE LD
Sbjct: 160 --GLQSIDLTACRQLKDDAICYLAKKCLKLRSLSLAVNANITDESVEEVAKNCRGLEQLD 217
Query: 150 LRGCWDVK 157
L GC V+
Sbjct: 218 LTGCLRVR 225
>sp|Q5XGC0|FXL15_XENTR F-box/LRR-repeat protein 15 OS=Xenopus tropicalis GN=fbxl15 PE=2
SV=1
Length = 292
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 27 FSLIAENAGSLQTLRLPRSE--MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKH 84
FS + N LQ L L ++D + + G+ + ++L+ C ++ +L AI
Sbjct: 72 FSELLRNNTVLQKLDLQSCCDWLTDKELLPVIGQNHHLIHINLNSCGQLTRQSLVAISLS 131
Query: 85 C-------------------KLLVVLCRNMHPLD-TADKLSQDDEANAIASTMPKLKRLE 124
C + LV C+ + +D TA + +DD + + +LK L
Sbjct: 132 CPHLQNICLGHCEWVDCLSLRSLVDHCKCLEAIDLTACRQLKDDTISYLVQKSTRLKSLS 191
Query: 125 MAYHV-ISTEIVLKILSSCALLEFLDLRGCWDVKLD 159
+A + IS V + +C LE LDL GC VK D
Sbjct: 192 LAVNANISDIAVEETAKNCRDLEHLDLTGCLRVKND 227
>sp|Q9C626|FB37_ARATH F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2
SV=1
Length = 518
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 31/171 (18%)
Query: 9 SSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPR---------SEMS--DSIVAQI-- 55
++ SL+ +C+ L+N F + A +L++L+L R EMS D V +I
Sbjct: 207 AASSLKSICLKELYNGQCFGPVIVGAKNLKSLKLFRCSGDWDLLLQEMSGKDHGVVEIHL 266
Query: 56 -AGRLSAVTFLDLSYCSK------IGAP-----ALEAIGKHCKLLVVLCRNMHPLDTADK 103
++S V +SYCS + P L AI + CK L R +H
Sbjct: 267 ERMQVSDVALSAISYCSSLESLHLVKTPECTNFGLAAIAEKCKRL----RKLHIDGWKAN 322
Query: 104 LSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSS-CALLEFLDLRGC 153
L D+ A+A +L+ L + V T + L +L++ C LE L L GC
Sbjct: 323 LIGDEGLVAVAKFCSQLQELVL-IGVNPTTLSLGMLAAKCLNLERLALCGC 372
>sp|Q9Z0Z3|SKP2_MOUSE S-phase kinase-associated protein 2 OS=Mus musculus GN=Skp2 PE=1
SV=1
Length = 424
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 5/165 (3%)
Query: 13 LRKLCVSGLH-NDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCS 71
L+ L + GL +D + +A+N ++ S S+S VA + S + L+LS+C
Sbjct: 208 LQNLSLEGLQLSDPIVKTLAQNENLVRLNLCGCSGFSESAVATLLSSCSRLDELNLSWCF 267
Query: 72 KIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVIS 131
++A H + L K Q + I P L RL+++ ++
Sbjct: 268 DFTEKHVQAAVAHLPNTITQLN----LSGYRKNLQKTDLCTIIKRCPNLIRLDLSDSIML 323
Query: 132 TEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVLGPF 176
L+ L L C+D+ D G P LK L F
Sbjct: 324 KNDCFPEFFQLNYLQHLSLSRCYDIIPDTLLELGEIPTLKTLQVF 368
>sp|Q8WV35|LRC29_HUMAN Leucine-rich repeat-containing protein 29 OS=Homo sapiens GN=LRRC29
PE=2 SV=1
Length = 223
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 30 IAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLL 88
+A SL+ L L S +SD AQ A + L+LS CS++ L+AIG+ C+ L
Sbjct: 121 VARGCPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLDAIGQACRQL 180
Query: 89 VVL 91
VL
Sbjct: 181 RVL 183
>sp|Q8N531|FBXL6_HUMAN F-box/LRR-repeat protein 6 OS=Homo sapiens GN=FBXL6 PE=2 SV=1
Length = 539
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 20/122 (16%)
Query: 62 VTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM---- 117
+TFL LS C + A AL + K C C +H LD + E+ A+ S +
Sbjct: 222 LTFLKLSGCHGVTADALVMLAKAC------C-QLHSLDLQHSMV---ESTAVVSFLEEAG 271
Query: 118 PKLKRLEMAYHVISTEIVLKILSS-CALLEFLDL-----RGCWDVKLDDKFMKGNFPNLK 171
++++L + Y +T I+ +L S C L+ L++ R ++L + ++ P L+
Sbjct: 272 SRMRKLWLTYSSQTTAILGALLGSCCPQLQVLEVSTGINRNSIPLQLPVEALQKGCPQLQ 331
Query: 172 VL 173
VL
Sbjct: 332 VL 333
>sp|P58727|TLR4_FELCA Toll-like receptor 4 OS=Felis catus GN=TLR4 PE=2 SV=1
Length = 833
Score = 33.5 bits (75), Expect = 1.5, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 12 SLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYC 70
+LR L +S H + F I SLQ L++ + D+ + I L+ +T LDLS C
Sbjct: 448 NLRYLDISYTHTQVAFHGIFNGLISLQILKMAGNSFQDNFLPNIFMELTNLTILDLSDC 506
>sp|Q9SKK0|EBF1_ARATH EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1
SV=1
Length = 628
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 30 IAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLL 88
IAE L+ L L R S ++D + IA +T L L CS+IG L AI + C L
Sbjct: 198 IAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKL 257
>sp|Q9TTN0|TLR4_PANPA Toll-like receptor 4 OS=Pan paniscus GN=TLR4 PE=3 SV=1
Length = 839
Score = 33.5 bits (75), Expect = 1.7, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 1 MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLS 60
M E + S +L L +S H + F+ I SL+ L++ + ++ + I L
Sbjct: 437 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR 496
Query: 61 AVTFLDLSYC 70
+TFLDLS C
Sbjct: 497 NLTFLDLSQC 506
>sp|O00206|TLR4_HUMAN Toll-like receptor 4 OS=Homo sapiens GN=TLR4 PE=1 SV=2
Length = 839
Score = 33.5 bits (75), Expect = 1.7, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 1 MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLS 60
M E + S +L L +S H + F+ I SL+ L++ + ++ + I L
Sbjct: 437 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR 496
Query: 61 AVTFLDLSYC 70
+TFLDLS C
Sbjct: 497 NLTFLDLSQC 506
>sp|Q8SPE8|TLR4_GORGO Toll-like receptor 4 OS=Gorilla gorilla gorilla GN=TLR4 PE=3 SV=1
Length = 837
Score = 33.5 bits (75), Expect = 1.7, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 1 MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLS 60
M E + S +L L +S H + F+ I SL+ L++ + ++ + I L
Sbjct: 435 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR 494
Query: 61 AVTFLDLSYC 70
+TFLDLS C
Sbjct: 495 NLTFLDLSQC 504
>sp|Q8SPE9|TLR4_PONPY Toll-like receptor 4 OS=Pongo pygmaeus GN=TLR4 PE=3 SV=1
Length = 828
Score = 33.1 bits (74), Expect = 2.0, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 1 MVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLS 60
M E + S +L L +S H + F+ I SL+ L++ + ++ + I L
Sbjct: 435 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLKVLKMAGNSFQENFLPDIFTELR 494
Query: 61 AVTFLDLSYC 70
+TFLDLS C
Sbjct: 495 NLTFLDLSQC 504
>sp|Q8BH70|FBXL4_MOUSE F-box/LRR-repeat protein 4 OS=Mus musculus GN=Fbxl4 PE=2 SV=1
Length = 621
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 49 DSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLL------------------VV 90
D I + I + + LDL C I + + C LL V
Sbjct: 468 DVIASMIGAKCKNLRTLDLWRCKNITENGIAELASGCVLLEELDLGWCPTLQSSTGCFVR 527
Query: 91 LCRNMHPLD----TADKLSQDDEANAIASTMPKLKRLE-MAYHVISTEIVLKILSSCALL 145
L R + L TA++ D + +AS +L++L+ + ++S + K+L SC L
Sbjct: 528 LARQLPNLQKLFLTANRSVCDTDIEELASNCTRLQQLDILGTRMVSPASLRKLLESCKDL 587
Query: 146 EFLDLRGCWDVKLDDKF---MKGNFPNLKVLGPFV 177
LD+ C ++D+K + +FP + + F
Sbjct: 588 SLLDVSFC--SQIDNKAVLELNASFPKVFIKKSFT 620
>sp|Q8BID8|FXL14_MOUSE F-box/LRR-repeat protein 14 OS=Mus musculus GN=Fbxl14 PE=2 SV=1
Length = 400
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 32 ENAGSLQTLRLPRSE-MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVV 90
+ GSL++L L + +SD+ + +A ++ LD+S+C K+G +L I +
Sbjct: 250 SHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQ------- 302
Query: 91 LCRNMHPLDTADKLS------QDDEANAIASTMPKLKRLEMAYHVISTEIVLKILS-SCA 143
LD LS DD N + M L+ L + V T+ L++++ +
Sbjct: 303 ------GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS 356
Query: 144 LLEFLDLRGCWDVKLDDKFMKGNFPNLKVL 173
L +DL GC + P LKVL
Sbjct: 357 QLTGIDLYGCTRITKRGLERITQLPCLKVL 386
>sp|Q17R01|FXL14_BOVIN F-box/LRR-repeat protein 14 OS=Bos taurus GN=FBXL14 PE=2 SV=1
Length = 400
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 32 ENAGSLQTLRLPRSE-MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVV 90
+ GSL++L L + +SD+ + +A ++ LD+S+C K+G +L I +
Sbjct: 250 SHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQ------- 302
Query: 91 LCRNMHPLDTADKLS------QDDEANAIASTMPKLKRLEMAYHVISTEIVLKILS-SCA 143
LD LS DD N + M L+ L + V T+ L++++ +
Sbjct: 303 ------GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS 356
Query: 144 LLEFLDLRGCWDVKLDDKFMKGNFPNLKVL 173
L +DL GC + P LKVL
Sbjct: 357 QLTGIDLYGCTRITKRGLERITQLPCLKVL 386
>sp|Q13309|SKP2_HUMAN S-phase kinase-associated protein 2 OS=Homo sapiens GN=SKP2 PE=1
SV=2
Length = 424
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 65/181 (35%), Gaps = 29/181 (16%)
Query: 18 VSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPA 77
VS LH I LQ L L +SD IV +A S + L+LS CS A
Sbjct: 195 VSTLHG------ILSQCSKLQNLSLEGLRLSDPIVNTLAKN-SNLVRLNLSGCSGFSEFA 247
Query: 78 LEAIGKHCKLL--------------VVLCRNMHPLDTADKLS--------QDDEANAIAS 115
L+ + C L V H +T +L+ Q + + +
Sbjct: 248 LQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR 307
Query: 116 TMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVLGP 175
P L L+++ V+ + L+ L L C+D+ + G P LK L
Sbjct: 308 RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQV 367
Query: 176 F 176
F
Sbjct: 368 F 368
>sp|Q8N1E6|FXL14_HUMAN F-box/LRR-repeat protein 14 OS=Homo sapiens GN=FBXL14 PE=1 SV=1
Length = 418
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 32 ENAGSLQTLRLPRSE-MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVV 90
+ GSL++L L + +SD+ + +A ++ LD+S+C K+G +L I +
Sbjct: 250 SHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQ------- 302
Query: 91 LCRNMHPLDTADKLS------QDDEANAIASTMPKLKRLEMAYHVISTEIVLKILS-SCA 143
LD LS DD N + M L+ L + V T+ L++++ +
Sbjct: 303 ------GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS 356
Query: 144 LLEFLDLRGCWDVKLDDKFMKGNFPNLKVL 173
L +DL GC + P LKVL
Sbjct: 357 QLTGIDLYGCTRITKRGLERITQLPCLKVL 386
>sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710
OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1
Length = 1120
Score = 32.3 bits (72), Expect = 2.9, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 6 ITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQT---LRLPRSEMSDSIVAQIAGRLS-- 60
I+ S G+L+ L V LH + + S+I G++++ L L +++++ SI + + G L
Sbjct: 142 ISPSLGNLKNLTVLYLHQNYLTSVIPSELGNMESMTDLALSQNKLTGSIPSSL-GNLKNL 200
Query: 61 AVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKL 120
V +L +Y + + P L NM + T LSQ+ +I ST+ L
Sbjct: 201 MVLYLYENYLTGVIPPELG--------------NMESM-TDLALSQNKLTGSIPSTLGNL 245
Query: 121 KRLEMAY 127
K L + Y
Sbjct: 246 KNLMVLY 252
>sp|O49286|SKP2B_ARATH F-box protein SKP2B OS=Arabidopsis thaliana GN=SKP2B PE=1 SV=1
Length = 360
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 23 NDMMFSLIAENAGSLQTL--RLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEA 80
N ++ SL A LQTL R + ++ D+ V IA + LDLS SKI +L +
Sbjct: 79 NSLVLSL-APKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYS 137
Query: 81 IGKHCKLLVVLCRNMHPLDTADKLSQDDEANA-IASTMPKLKRLEMAYHV--ISTEIVLK 137
+ + C N+ L+ + S D A A + KLK L + V +S +
Sbjct: 138 LARGCT-------NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQA 190
Query: 138 ILSSCALLEFLDLRGCWDVKLDDKFMKGNF--PNLKVL 173
I +C L+ L+L C ++ DD M + P+L+ L
Sbjct: 191 IGENCNQLQSLNLGWCENIS-DDGVMSLAYGCPDLRTL 227
>sp|C8V4D4|GRRA_EMENI SCF E3 ubiquitin ligase complex F-box protein grrA OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=grrA PE=2 SV=1
Length = 585
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 45 SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKL 104
S ++DS V Q+ + + ++DL+ CS++ +++ + KL + + A L
Sbjct: 383 SNINDSAVIQLVKSCNRIRYIDLACCSRLTDRSVQQLATLPKLRRIGLVKCQLITDASIL 442
Query: 105 SQDDEANAIASTMPKLKRLEMAYHVISTEI-VLKILSSCALLEFLDLRG 152
+ A + L+R+ ++Y V T + + +L+SC L L L G
Sbjct: 443 ALARPAQDHSVPCSSLERVHLSYCVNLTMVGIHALLNSCPRLTHLSLTG 491
>sp|Q9TSP2|TLR4_PAPAN Toll-like receptor 4 OS=Papio anubis GN=TLR4 PE=3 SV=1
Length = 826
Score = 31.6 bits (70), Expect = 4.9, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 12 SLRKLC---VSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLS 68
SLR L +S H + F+ I + SL+ L++ + ++ + I L +TFLDLS
Sbjct: 445 SLRNLIYLDISHTHTTVAFNGIFDGLLSLKVLKMAGNSFQENFLPDIFTDLKNLTFLDLS 504
Query: 69 YC 70
C
Sbjct: 505 QC 506
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,841,596
Number of Sequences: 539616
Number of extensions: 3984312
Number of successful extensions: 9447
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 9298
Number of HSP's gapped (non-prelim): 190
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)