BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025447
(252 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QGX|A Chain A, X-Ray Structure Of Yeast Hal2p
pdb|1K9Y|A Chain A, The Papase Hal2p Complexed With Magnesium Ions And
Reaction Products: Amp And Inorganic Phosphate
pdb|1K9Z|A Chain A, The Papase Hal2p Complexed With Zinc Ions
pdb|1KA0|A Chain A, The Papase Hal2p Complexed With A Sodium Ion And The
Reaction Product Amp
pdb|1KA1|A Chain A, The Papase Hal2p Complexed With Calcium And Magnesium Ions
And Reaction Substrate: Pap
Length = 357
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 96/180 (53%), Gaps = 24/180 (13%)
Query: 73 SKNDKSPVTVADYGSQALVSFALQKEFPSEPFSLVAEEDSKDLRQDGAQETLERITKLVN 132
+KND SPVT DY +Q ++ A++ FP + +V EE S L ++ ++N
Sbjct: 38 TKNDNSPVTTGDYAAQTIIINAIKSNFPDD--KVVGEESSSGLSD-------AFVSGILN 88
Query: 133 ETLASDGAYNTSTL--------------STEDVIRAIDGGKSEGGSHGRHWVLDPIDGTK 178
E A+D YN + S EDV + ID G EGG GR W LDPIDGTK
Sbjct: 89 EIKANDEVYNKNYKKDDFLFTNDQFPLKSLEDVRQIIDFGNYEGGRKGRFWCLDPIDGTK 148
Query: 179 GFVRGDQYAIALALLDEGKVVLGVLACPNLPLASIVGDNQHSSNNEVGCLFFAQVGAGTY 238
GF+RG+Q+A+ LAL+ +G V LG + CPNL L+S G + G +F A G G +
Sbjct: 149 GFLRGEQFAVCLALIVDGVVQLGCIGCPNLVLSS-YGAQDLKGHESFGYIFRAVRGLGAF 207
>pdb|2P3N|A Chain A, Thermotoga Maritima Impase Tm1415
pdb|2P3N|B Chain B, Thermotoga Maritima Impase Tm1415
pdb|2P3N|C Chain C, Thermotoga Maritima Impase Tm1415
pdb|2P3N|D Chain D, Thermotoga Maritima Impase Tm1415
pdb|2P3V|A Chain A, Thermotoga Maritima Impase Tm1415
pdb|2P3V|B Chain B, Thermotoga Maritima Impase Tm1415
pdb|2P3V|C Chain C, Thermotoga Maritima Impase Tm1415
pdb|2P3V|D Chain D, Thermotoga Maritima Impase Tm1415
Length = 256
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 167 RHWVLDPIDGTKGFVRG-DQYAIALALLDEGKVVLGVLACPNL 208
R W++DPIDGT FV G ++I+LA ++ G+V LGV+ P L
Sbjct: 74 RLWIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPAL 116
>pdb|3T0J|A Chain A, Crystal Structure Of Inositol Monophosphatase - Ii From
Staphylococcus Aureus Mssa476
pdb|3T0J|B Chain B, Crystal Structure Of Inositol Monophosphatase - Ii From
Staphylococcus Aureus Mssa476
pdb|3T0J|C Chain C, Crystal Structure Of Inositol Monophosphatase - Ii From
Staphylococcus Aureus Mssa476
pdb|3T0J|D Chain D, Crystal Structure Of Inositol Monophosphatase - Ii From
Staphylococcus Aureus Mssa476
Length = 283
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 63/150 (42%), Gaps = 40/150 (26%)
Query: 121 QETLERITKLVNETLASDGAYNTSTL------STEDVI----------RAIDGGKSEGG- 163
QE RI +L+ + L + N + L +TED I + G + G
Sbjct: 20 QEAGIRIKQLMEQNLTIETKSNPNDLVTNVDKATEDFIFDTILETYPNHQVLGEEGHGHD 79
Query: 164 ---SHGRHWVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVLACPNLPLASIVGDNQH 219
S G WV+DPIDGT FV + + +AI++ + +GK P A V D
Sbjct: 80 IDTSKGTVWVVDPIDGTLNFVHQQENFAISIGIYIDGK-----------PYAGFVYDVM- 127
Query: 220 SSNNEVGCLFFAQVGAGTYM--QSLKSLEE 247
L+ A+VG G Y Q LK L +
Sbjct: 128 -----ADVLYHAKVGEGAYRGSQPLKPLND 152
>pdb|3B8B|A Chain A, Crystal Structure Of Cysq From Bacteroides
Thetaiotaomicron, A Bacterial Member Of The Inositol
Monophosphatase Family
Length = 292
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 28/104 (26%)
Query: 160 SEGGSHGRH---------WVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVLACPNLP 209
SE G H + W++DP+DGTK F+ R ++ + +AL+ V GV+ P
Sbjct: 84 SEEGKHXDYAVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPVXGVIYVP--- 140
Query: 210 LASIVGDNQHSSNNEVGCLFFAQVGAGTYMQS-LKSLEEQASSL 252
E L+FA G G Y S + LE++ +L
Sbjct: 141 -----------VKKE---LYFAVEGTGAYKXSGIVGLEDEGVTL 170
>pdb|3RYD|A Chain A, Crystal Strucutre Of Ca Bound Impase Family Protein From
Staphylococcus Aureus
pdb|3RYD|C Chain C, Crystal Strucutre Of Ca Bound Impase Family Protein From
Staphylococcus Aureus
Length = 273
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 19/83 (22%)
Query: 169 WVLDPIDGTKGFVRGDQ-YAIALALLDEGKVVLGVLACPNLPLASIVGDNQHSSNNEVGC 227
W++DPIDGT V+ + Y I LA EGK P+ S V D H
Sbjct: 93 WIMDPIDGTANLVKQQEDYCIILAYFYEGK-----------PMLSYVYDYPHKK------ 135
Query: 228 LFFAQVGAGTYMQSLKSLEEQAS 250
L+ A G G + +K +EE S
Sbjct: 136 LYKAIRGEGAFCNGIK-MEEPPS 157
>pdb|3QMF|A Chain A, Crystal Strucuture Of An Inositol Monophosphatase Family
Protein (Sas2203) From Staphylococcus Aureus Mssa476
pdb|3QMF|B Chain B, Crystal Strucuture Of An Inositol Monophosphatase Family
Protein (Sas2203) From Staphylococcus Aureus Mssa476
Length = 273
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 19/83 (22%)
Query: 169 WVLDPIDGTKGFVRGDQ-YAIALALLDEGKVVLGVLACPNLPLASIVGDNQHSSNNEVGC 227
W++DPIDGT V+ + Y I LA EGK P+ S V D H
Sbjct: 93 WIMDPIDGTANLVKQQEDYCIILAYFYEGK-----------PMLSYVYDYPHKK------ 135
Query: 228 LFFAQVGAGTYMQSLKSLEEQAS 250
L+ A G G + +K +EE S
Sbjct: 136 LYKAIRGEGAFCNGIK-MEEPPS 157
>pdb|3LUZ|A Chain A, Crystal Structure Of Extragenic Suppressor Protein Suhb
From Bartonella Henselae, Via Combined Iodide Sad
Molecular Replacement
pdb|3LUZ|B Chain B, Crystal Structure Of Extragenic Suppressor Protein Suhb
From Bartonella Henselae, Via Combined Iodide Sad
Molecular Replacement
pdb|3LV0|A Chain A, Crystal Structure Of Extragenic Suppressor Protein Suhb
From Bartonella Henselae, Native
pdb|3LV0|B Chain B, Crystal Structure Of Extragenic Suppressor Protein Suhb
From Bartonella Henselae, Native
Length = 267
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 168 HWVLDPIDGTKGFVRG-DQYAIALALLDEGKVVLGVLACP 206
+++DP+DGT F+ G +A+++AL +GK+V GV+ P
Sbjct: 86 RFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNP 125
>pdb|2QFL|A Chain A, Structure Of Suhb: Inositol Monophosphatase And Extragenic
Suppressor From E. Coli
Length = 267
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 140 AYNTSTLSTEDVIRAIDGGKSEGGSHGRHWVLDPIDGTKGFV-RGDQYAIALALLDEGKV 198
+Y T+ TE+ G+ EG WV+DP+DGT F+ R +A+++A+ +G+
Sbjct: 58 SYPQHTIITEE------SGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRT 111
Query: 199 VLGVLACP 206
+ V+ P
Sbjct: 112 EVAVVYDP 119
>pdb|1JP4|A Chain A, Crystal Structure Of An Enzyme Displaying Both Inositol-
Polyphosphate 1-Phosphatase And 3'-Phosphoadenosine-5'-
Phosphate Phosphatase Activities
Length = 308
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 36/134 (26%)
Query: 81 TVADYGSQALVSFALQKEFPSEPFSLVAEED------SKDLRQDGAQETLERITKLVNET 134
T AD Q + +L ++FP +++ EED ++L +DG E E
Sbjct: 48 TKADRMVQMSICSSLSRKFPK--LTIIGEEDLPPGEVDQELIEDGQSE----------EI 95
Query: 135 LASDGAYNTSTLSTEDVIRAIDGGKSEGGSHGRHWVLDPIDGTKGFVRG--DQYAIALAL 192
L S + ED++ WV DP+DGTK + G D + + +
Sbjct: 96 LKQPCPSQYSAIKEEDLVV---------------WV-DPVDGTKEYTEGLLDNVTVLIGI 139
Query: 193 LDEGKVVLGVLACP 206
EGK + G++ P
Sbjct: 140 AYEGKAIAGIINQP 153
>pdb|2WEF|A Chain A, Human 3'(2'), 5'-Bisphosphate Nucleotidase 1 (Bpnt1) In
Complex With Amp, Po4 And Magnesium
Length = 311
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 24/128 (18%)
Query: 81 TVADYGSQALVSFALQKEFPSEPFSLVAEEDSKDLRQDGAQETLERITKLVNETLASDGA 140
T AD +Q + +L ++FP +++ EED D QE +E E L
Sbjct: 44 TKADRLAQMSICSSLARKFPK--LTIIGEEDLPSEEVD--QELIE--DSQWEEILKQPCP 97
Query: 141 YNTSTLSTEDVIRAIDGGKSEGGSHGRHWVLDPIDGTKGFVRG--DQYAIALALLDEGKV 198
S + ED++ WV DP+DGTK + G D + + + EGK
Sbjct: 98 SQYSAIKEEDLVV---------------WV-DPLDGTKEYTEGLLDNVTVLIGIAYEGKA 141
Query: 199 VLGVLACP 206
+ GV+ P
Sbjct: 142 IAGVINQP 149
>pdb|2BJI|A Chain A, High Resolution Structure Of Myo-Inositol Monophosphatase,
The Target Of Lithium Therapy
pdb|2BJI|B Chain B, High Resolution Structure Of Myo-Inositol Monophosphatase,
The Target Of Lithium Therapy
Length = 277
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 169 WVLDPIDGTKGFVRGDQY-AIALALLDEGKVVLGVL 203
W++DPIDGT FV G + A+++ + K+ G++
Sbjct: 87 WIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIV 122
>pdb|2Q74|A Chain A, Mycobacterium Tuberculosis Suhb
pdb|2Q74|B Chain B, Mycobacterium Tuberculosis Suhb
pdb|2Q74|C Chain C, Mycobacterium Tuberculosis Suhb
Length = 299
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 169 WVLDPIDGTKGFVRG-DQYAIALA 191
WVLDPIDGT FV G YA+++
Sbjct: 101 WVLDPIDGTVNFVYGIPAYAVSIG 124
>pdb|2PCR|A Chain A, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
(Aq_1983) From Aquifex Aeolicus Vf5
pdb|2PCR|B Chain B, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
(Aq_1983) From Aquifex Aeolicus Vf5
pdb|2PCR|C Chain C, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
(Aq_1983) From Aquifex Aeolicus Vf5
pdb|2PCR|D Chain D, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
(Aq_1983) From Aquifex Aeolicus Vf5
Length = 264
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 168 HWVLDPIDGTKGFVRG-DQYAIALALLDEGKVVLGVLACPNL 208
W +DP+DGTK ++ G +A+++ L+ + ++G + P
Sbjct: 82 RWFIDPLDGTKNYINGFPIFAVSVGLVKGEEPIVGAVYLPYF 123
>pdb|1IMA|A Chain A, Structural Analysis Of Inositol Monophosphatase Complexes
With Substrates
pdb|1IMA|B Chain B, Structural Analysis Of Inositol Monophosphatase Complexes
With Substrates
pdb|1IMB|A Chain A, Structural Analysis Of Inositol Monophosphatase Complexes
With Substrates
pdb|1IMB|B Chain B, Structural Analysis Of Inositol Monophosphatase Complexes
With Substrates
pdb|1IMC|A Chain A, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-Metal Ion Catalysis
pdb|1IMC|B Chain B, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-Metal Ion Catalysis
pdb|1IMD|A Chain A, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-metal Ion Catalysis
pdb|1IMD|B Chain B, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-metal Ion Catalysis
pdb|1IME|A Chain A, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-Metal Ion Catalysis
pdb|1IME|B Chain B, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-Metal Ion Catalysis
pdb|1IMF|A Chain A, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-Metal Ion Catalysis
pdb|4AS4|A Chain A, Structure Of Human Inositol Monophosphatase 1
pdb|4AS4|B Chain B, Structure Of Human Inositol Monophosphatase 1
Length = 277
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 169 WVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVL 203
W++DPIDGT FV R A+++ K+ GV+
Sbjct: 87 WIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVV 122
>pdb|2HHM|A Chain A, Structure Of Inositol Monophosphatase, The Putative Target
Of Lithium Therapy
pdb|2HHM|B Chain B, Structure Of Inositol Monophosphatase, The Putative Target
Of Lithium Therapy
pdb|1AWB|A Chain A, Human Myo-Inositol Monophosphatase In Complex With D-
Inositol-1-Phosphate And Calcium
pdb|1AWB|B Chain B, Human Myo-Inositol Monophosphatase In Complex With D-
Inositol-1-Phosphate And Calcium
Length = 276
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 169 WVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVL 203
W++DPIDGT FV R A+++ K+ GV+
Sbjct: 86 WIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVV 121
>pdb|4AS5|A Chain A, Structure Of Mouse Inositol Monophosphatase 1
pdb|4AS5|B Chain B, Structure Of Mouse Inositol Monophosphatase 1
pdb|4AS5|C Chain C, Structure Of Mouse Inositol Monophosphatase 1
pdb|4AS5|D Chain D, Structure Of Mouse Inositol Monophosphatase 1
Length = 277
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 169 WVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVL 203
WV+DPIDGT FV R A+++ L ++ G++
Sbjct: 87 WVIDPIDGTTNFVHRFPFVAVSIGFLVNKEMEFGIV 122
>pdb|2CZH|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) With Phosphate Ion (Orthorhombic Form)
pdb|2CZH|B Chain B, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) With Phosphate Ion (Orthorhombic Form)
pdb|2CZI|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) With Calcium And Phosphate Ions
pdb|2CZK|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) (Trigonal Form)
pdb|2DDK|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) (Orthorhombic Form)
pdb|2DDK|B Chain B, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) (Orthorhombic Form)
Length = 299
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 164 SHGRHWVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVL 203
+H W++DPIDGT FV R A+++ ++ GV+
Sbjct: 104 THSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVI 144
>pdb|2FVZ|A Chain A, Human Inositol Monophosphosphatase 2
pdb|2FVZ|B Chain B, Human Inositol Monophosphosphatase 2
pdb|2FVZ|C Chain C, Human Inositol Monophosphosphatase 2
pdb|2FVZ|D Chain D, Human Inositol Monophosphosphatase 2
Length = 273
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 164 SHGRHWVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVL 203
+H W++DPIDGT FV R A+++ ++ GV+
Sbjct: 78 THSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVI 118
>pdb|2K46|A Chain A, Xenopus Laevis Malectin Complexed With Nigerose
(Glcalpha1- 3glc)
pdb|2KR2|A Chain A, Xenopus Laevis Malectin Complexed With Maltose
(Glcalpha1-4glc)
Length = 190
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 149 EDVIRAID-GGKSEGGSHGRHWVLDPIDGTKGFVRGDQYAIALALL 193
+ VI A++ GG+S HG H+ DP++G G R Y + L +L
Sbjct: 8 DKVIWAVNAGGESHVDVHGIHYRKDPLEGRVG--RASDYGMKLPIL 51
>pdb|2JWP|A Chain A, Malectin
Length = 174
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 149 EDVIRAID-GGKSEGGSHGRHWVLDPIDGTKGFVRGDQYAIALALL 193
+ VI A++ GG+S HG H+ DP++G G R Y + L +L
Sbjct: 4 DKVIWAVNAGGESHVDVHGIHYRKDPLEGRVG--RASDYGMKLPIL 47
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.129 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,470,117
Number of Sequences: 62578
Number of extensions: 246758
Number of successful extensions: 421
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 401
Number of HSP's gapped (non-prelim): 28
length of query: 252
length of database: 14,973,337
effective HSP length: 97
effective length of query: 155
effective length of database: 8,903,271
effective search space: 1380007005
effective search space used: 1380007005
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 50 (23.9 bits)