BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025449
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6UNT2|RL5_CUCSA 60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1
Length = 302
Score = 316 bits (809), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 150/163 (92%), Positives = 160/163 (98%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
MAFAKAQK+KAYFKRYQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDI
Sbjct: 1 MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
TAQIISASIAGD+VLASAY+HELP+YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE
Sbjct: 61 TAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
Query: 121 GHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALK 163
G+VEATGEDYSVEP + RRPFRALLDVGL++TTTGNRVFGALK
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALK 163
>sp|P49227|RL52_ARATH 60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2
SV=3
Length = 301
Score = 302 bits (773), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 155/163 (95%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K+ KS AYFKRYQVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI
Sbjct: 1 MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
AQI+SASIAGDIV ASAYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMD EYE
Sbjct: 61 VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
Query: 121 GHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALK 163
G+VEATGED+SVEPT++RRPFRALLDVGL++TTTGNRVFGALK
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALK 163
>sp|Q8LBI1|RL51_ARATH 60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=2
Length = 301
Score = 301 bits (770), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 155/163 (95%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K+ KS AYFKRYQVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI
Sbjct: 1 MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
AQI+SASIAGDIV ASAYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMD EYE
Sbjct: 61 VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
Query: 121 GHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALK 163
G+VEATGED+SVEPT++RRPFRALLDVGL++TTTGNRVFGALK
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALK 163
>sp|A2WXX3|RL51_ORYSI 60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A
PE=2 SV=2
Length = 304
Score = 287 bits (734), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 133/162 (82%), Positives = 150/162 (92%)
Query: 2 AFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIT 61
F K QK+ AY+KR+QVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDIT
Sbjct: 3 GFVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDIT 62
Query: 62 AQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEG 121
AQI+ A+IAGDIV+A+AY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+ +D EYEG
Sbjct: 63 AQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEG 122
Query: 122 HVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALK 163
++EATGEDY VEP + RRPFRALLDVGL++TTTGNRVFGALK
Sbjct: 123 NIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALK 164
>sp|Q0JGY1|RL51_ORYSJ 60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A
PE=2 SV=1
Length = 304
Score = 285 bits (730), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 133/162 (82%), Positives = 149/162 (91%)
Query: 2 AFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIT 61
F K QK+ AY KR+QVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDIT
Sbjct: 3 GFVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDIT 62
Query: 62 AQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEG 121
AQI+ A+IAGDIV+A+AY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+ +D EYEG
Sbjct: 63 AQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEG 122
Query: 122 HVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALK 163
++EATGEDY VEP + RRPFRALLDVGL++TTTGNRVFGALK
Sbjct: 123 NIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALK 164
>sp|Q8L4L4|RL52_ORYSJ 60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B
PE=3 SV=1
Length = 304
Score = 275 bits (703), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/162 (80%), Positives = 146/162 (90%), Gaps = 3/162 (1%)
Query: 2 AFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIT 61
F K QK+ AYFKR+QVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFV TNKDIT
Sbjct: 6 GFVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDIT 62
Query: 62 AQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEG 121
AQI+ A+IAGDIV+A+AY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL + +D EYEG
Sbjct: 63 AQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEG 122
Query: 122 HVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALK 163
+VEATGEDY VEP + RRPFRALLDVGL++TTTGNRVFGALK
Sbjct: 123 NVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALK 164
>sp|Q627R7|RL5_CAEBR 60S ribosomal protein L5 OS=Caenorhabditis briggsae GN=rpl-5 PE=3
SV=2
Length = 294
Score = 234 bits (596), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 138/189 (73%), Gaps = 14/189 (7%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M K K+KAYFKRYQVK KRRREGKTDY AR RL QDKNKYNTPKYR +VR TNKDI
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLKRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRLTNKDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
AQ+ + I GD+V+ASAYAHELPRYGL+ GLTNYAAAY TGLLLARR LK + +D+ Y+
Sbjct: 61 VAQLAYSKIEGDVVVASAYAHELPRYGLKAGLTNYAAAYATGLLLARRHLKAIGLDSTYK 120
Query: 121 GHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKVI--------------F 166
GH E TGEDY+VE +R PF+A+LD+GL +TTTG+++F +K + F
Sbjct: 121 GHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFF 180
Query: 167 KFIQTSYDY 175
F Q S DY
Sbjct: 181 GFDQESKDY 189
>sp|Q4KTI3|RL5_SUBDO 60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1
Length = 293
Score = 232 bits (592), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/164 (70%), Positives = 131/164 (79%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAYFKRYQVK++RRREGKTDYRAR RL+ QDKNKYNTPKYR V+RFTN DI
Sbjct: 1 MPFVKVIKNKAYFKRYQVKFRRRREGKTDYRARKRLVVQDKNKYNTPKYRIVIRFTNTDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QII A I GD VL SAYAHELPRYG++VGLTNYAAAYCTGLLLARR+L L + +Y
Sbjct: 61 ICQIIYAKIEGDKVLVSAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLTNLGLADKYA 120
Query: 121 GHVEATGEDYSVEP-TENRRPFRALLDVGLVKTTTGNRVFGALK 163
G + GED++VE + RPFRA LDVGL +TTTGNRVF A+K
Sbjct: 121 GQTDIDGEDFNVEHMGDGPRPFRAFLDVGLTRTTTGNRVFAAMK 164
>sp|P49405|RL5_CAEEL 60S ribosomal protein L5 OS=Caenorhabditis elegans GN=rpl-5 PE=3
SV=1
Length = 293
Score = 231 bits (589), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 108/165 (65%), Positives = 133/165 (80%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M K K+KAYFKRYQVK +RRREGKTDY AR RL QDKNKYNTPKYR +VR TNKD+
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
AQ+ + I GD+V+ASAY+HELPRYGL+VGLTNYAAAY TGLLLARR LK + +D+ Y+
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 121 GHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKVI 165
GH E TGEDY+VE +R PF+A+LD+GL +TTTG+++F +K +
Sbjct: 121 GHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGV 165
>sp|Q26481|RL5_STYCL 60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3
Length = 295
Score = 224 bits (571), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAYFKRYQVKYKRRR+GKTDY AR RL+ QDKNKYNTPKYR +VRFTNKDI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKYKRRRQGKTDYFARKRLVVQDKNKYNTPKYRMIVRFTNKDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI A I GD+V+ +AYAHELPRYG++VGLTNYAAAYCTGLLL+RR+L +D YE
Sbjct: 61 VCQIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIYE 120
Query: 121 GHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFGALK 163
G E G+++ VE + + FRA LDVGL +TTTG +VFGA+K
Sbjct: 121 GQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAKVFGAMK 164
>sp|Q5XUC7|RL5_TOXCI 60S ribosomal protein L5 OS=Toxoptera citricida GN=RpL5 PE=2 SV=1
Length = 300
Score = 224 bits (571), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 131/164 (79%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+K YFKRYQVK+KRRREGKTDY AR RLI QDKNKY+TPKYR +VRF+N+DI
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYDTPKYRLIVRFSNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
T Q+ + I GD ++ +AY+HELP+YG++VGLTNYAAAYCTGLL+ARR+LK L +D YE
Sbjct: 61 TCQVAHSRIEGDKIVCAAYSHELPKYGVKVGLTNYAAAYCTGLLVARRLLKKLGLDRLYE 120
Query: 121 GHVEATGEDYSVEPT-ENRRPFRALLDVGLVKTTTGNRVFGALK 163
G EA GE+Y VEP E FR LDVGL+KT+TG RVFGA+K
Sbjct: 121 GLKEANGEEYYVEPADEGPNAFRCNLDVGLMKTSTGARVFGAMK 164
>sp|O65353|RL5_HELAN 60S ribosomal protein L5 OS=Helianthus annuus GN=RPL5A PE=2 SV=1
Length = 297
Score = 223 bits (569), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 131/164 (79%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+K YFKRYQVK+KRRREGKTDY AR RLI QDKNKYNTPKYR VVRF+N+DI
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYFARKRLIAQDKNKYNTPKYRLVVRFSNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
T Q+ + I GD +L +AYAHELP+YG++VGLTNYAAAYCTGLLLAR++L L +D Y
Sbjct: 61 TCQVAYSRIEGDKILCAAYAHELPQYGVKVGLTNYAAAYCTGLLLARKLLSQLGLDKLYI 120
Query: 121 GHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALK 163
G E TGE+++V+P E+ FR LDVGL++TTTG RVFGA+K
Sbjct: 121 GSTEVTGEEFNVKPVEDGPGAFRCYLDVGLMRTTTGARVFGAMK 164
>sp|P22451|RL5_CHICK 60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2
Length = 297
Score = 222 bits (566), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/164 (65%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YE
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYE 120
Query: 121 GHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFGALK 163
G VE TG++Y+VE + + F LD GL +TTTGN+VFGALK
Sbjct: 121 GQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALK 164
>sp|Q9W5R8|RL5_DROME 60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=2
SV=2
Length = 299
Score = 222 bits (565), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/164 (65%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+K YFKRYQVK++RRREGKTDY AR RL QDKNKYNTPKYR +VR +NKDI
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
T QI A I GD V+ +AY+HELP+YG++VGLTNYAAAYCTGLL+ARRVL L +D+ Y
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 121 GHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALK 163
G E TGE+++VEP ++ FR LDVGL +TTTG RVFGA+K
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMK 164
>sp|P15125|RL5A_XENLA 60S ribosomal protein L5-A OS=Xenopus laevis GN=rpl5-a PE=2 SV=2
Length = 296
Score = 221 bits (564), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/164 (65%), Positives = 128/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YE
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGIKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYE 120
Query: 121 GHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFGALK 163
G VE TG++Y+VE + F LD GL +TTTGN+VFGALK
Sbjct: 121 GQVEVTGDEYNVESIDGEPGAFTCYLDAGLTRTTTGNKVFGALK 164
>sp|P15126|RL5B_XENLA 60S ribosomal protein L5-B OS=Xenopus laevis GN=rpl5-b PE=2 SV=2
Length = 296
Score = 221 bits (563), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/164 (65%), Positives = 128/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YE
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYE 120
Query: 121 GHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFGALK 163
G VE TG++Y+VE + F LD GL +TTTGN+VFGALK
Sbjct: 121 GQVEVTGDEYNVESVDGEPGAFTCYLDAGLTRTTTGNKVFGALK 164
>sp|O22608|RL5_DUNSA 60S ribosomal protein L5 OS=Dunaliella salina GN=RPL5 PE=2 SV=1
Length = 271
Score = 216 bits (550), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 130/164 (79%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M + K K+ YF RYQVKY+RRR+GKTDYRAR+RL+ QDKNKYNT KYR VVRF+NK++
Sbjct: 1 MGYVKVVKTSPYFSRYQVKYRRRRQGKTDYRARLRLVRQDKNKYNTHKYRLVVRFSNKNV 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
T QI+ ++I GD+V+A+AY+ ELP YGL+VGLTNY+AAYC GLL+ARR+L L + Y+
Sbjct: 61 TCQIVYSTIQGDVVMAAAYSKELPNYGLKVGLTNYSAAYCVGLLVARRILTKLNLADTYK 120
Query: 121 GHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALK 163
G E GEDY+VEP E+ +PF LLD GL +T+TG++VF A+K
Sbjct: 121 GQEEPDGEDYNVEPVEDGPKPFYCLLDTGLKRTSTGSKVFAAMK 164
>sp|Q4UDE7|RL5_THEAN 60S ribosomal protein L5 OS=Theileria annulata GN=RPL5 PE=3 SV=1
Length = 306
Score = 215 bits (547), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 132/164 (80%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F + K+KAYF+R+QVK++RRREGKTDY AR RL+ QDKNKY++PKYR VVR TNK +
Sbjct: 1 MTFLRVVKNKAYFRRFQVKFRRRREGKTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRV 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI+S+++ GD V ASA + EL YG++VGLTNYAAAYCTGLLLARR+L L++D+++
Sbjct: 61 ICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFV 120
Query: 121 GHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALK 163
G VEA GE Y VE +N RRPF+ALLDVG+ TTGNRVFGALK
Sbjct: 121 GKVEADGELYHVEEDDNERRPFKALLDVGIKNVTTGNRVFGALK 164
>sp|Q4N655|RL5_THEPA 60S ribosomal protein L5 OS=Theileria parva GN=RPL5 PE=3 SV=1
Length = 306
Score = 215 bits (547), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 132/164 (80%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F + K+KAYF+R+QVK++RRREGKTDY AR RL+ QDKNKY++PKYR VVR TNK +
Sbjct: 1 MTFLRVVKNKAYFRRFQVKFRRRREGKTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRV 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI+S+++ GD V ASA + EL YG++VGLTNYAAAYCTGLLLARR+L L++D+++
Sbjct: 61 ICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFV 120
Query: 121 GHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALK 163
G VEA GE Y VE +N RRPF+ALLDVG+ TTGNRVFGALK
Sbjct: 121 GKVEADGELYHVEEEDNERRPFKALLDVGIKNVTTGNRVFGALK 164
>sp|Q56FG6|RL5_LYSTE 60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2
SV=1
Length = 297
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 128/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+K YFKR+QVKYKRRREGKTDY AR RL QDK+KYNTPKYR +VR +NKDI
Sbjct: 1 MGFVKVVKNKQYFKRFQVKYKRRREGKTDYYARKRLTVQDKSKYNTPKYRLIVRLSNKDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
T QI + I GD ++ +AY+HELP+YG++VGLTNYAAAYCTGLLLARR+LK L++D Y
Sbjct: 61 TCQIAYSRIEGDRIVCAAYSHELPKYGIKVGLTNYAAAYCTGLLLARRLLKQLKLDTLYT 120
Query: 121 GHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALK 163
G E G++Y+VE ++ FR LD GL++TTTG R+FGA+K
Sbjct: 121 GTTEVDGDEYNVEEHDDGPGAFRCYLDTGLMRTTTGARIFGAMK 164
>sp|O59953|RL5_NEUCR 60S ribosomal protein L5 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rpl-5
PE=3 SV=1
Length = 301
Score = 210 bits (535), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/167 (64%), Positives = 124/167 (74%), Gaps = 4/167 (2%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
MAF K K+ AY+ R+Q KYKRRREGKTDY AR RLI Q KNKYN PKYR VVRFTN+DI
Sbjct: 1 MAFHKLVKNSAYYSRFQTKYKRRREGKTDYYARKRLITQAKNKYNAPKYRLVVRFTNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI+S+ I GD V ASAY+HEL YG+E GLTN+AAAY TGLLLARRVLK L +D ++
Sbjct: 61 ILQIVSSEITGDKVFASAYSHELKAYGIEHGLTNWAAAYATGLLLARRVLKKLGLDETFK 120
Query: 121 GHVEATGEDYSVEPTE----NRRPFRALLDVGLVKTTTGNRVFGALK 163
G EA GE E E RRPF+A LDVGL +T+TG RVFGA+K
Sbjct: 121 GVEEADGEYKLTEAAETDDGERRPFKAFLDVGLARTSTGARVFGAMK 167
>sp|Q5EY89|RL5_EIMTE 60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1
Length = 311
Score = 210 bits (534), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 138/191 (72%), Gaps = 4/191 (2%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
MAF KA K+KAYFKR+QVKY+RRREGKTDY AR RLI QDKNKYN PKYRFVVR TN +
Sbjct: 1 MAFVKAIKNKAYFKRFQVKYRRRREGKTDYAARRRLILQDKNKYNAPKYRFVVRVTNSRV 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
Q++ A++ GD ++ SA + EL RYG++VGLTNY+AAY TGLLLARR+LK + E++
Sbjct: 61 LCQVMYATLQGDRLVCSADSQELTRYGIKVGLTNYSAAYATGLLLARRLLKQKGLADEFK 120
Query: 121 GHVEATGEDYSVEP-TENRRPFRALLDVGLVKTTTGNRVFGALKVIFK---FIQTSYDYI 176
G + +GE+Y +E +E RRPF+ +LDVG+V TT GNRVFGA+K I S
Sbjct: 121 GLEKPSGEEYHIEEVSEERRPFKCVLDVGIVATTVGNRVFGAMKGACDGGLHIPHSNKRF 180
Query: 177 NGFSTTLDLSD 187
GF+ D +D
Sbjct: 181 PGFTKGEDGAD 191
>sp|O44248|RL5_ANOGA 60S ribosomal protein L5 OS=Anopheles gambiae GN=RpL5 PE=2 SV=3
Length = 325
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 128/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+K YFKRYQV+++RRREGKTDY AR RLI QDKNKYNTPK+R +VR +N+DI
Sbjct: 1 MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
T QI A I GD ++ +AY+HELPRYG++VGLTNYAAAYCTGLL+ARR+L+ L +D Y
Sbjct: 61 TCQIAYARIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120
Query: 121 GHVEATGEDYSVEPT-ENRRPFRALLDVGLVKTTTGNRVFGALK 163
G + TGE+Y VEP E FR LDVGL +TTTG RVFGA+K
Sbjct: 121 GCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGARVFGAMK 164
>sp|Q1HQU2|RL5_AEDAE 60S ribosomal protein L5 OS=Aedes aegypti GN=RpL5 PE=2 SV=1
Length = 297
Score = 208 bits (529), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/164 (64%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+K YFKRYQV+++RRREGKTDY AR RLI QDKNKYNTPKYR +VR +N+DI
Sbjct: 1 MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKYRLIVRLSNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
T QI A I GD ++ +AY+HELPRYG++VGLTNYAAAYCTGLL+ARR+L+ L +D Y
Sbjct: 61 TCQIAYARIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYT 120
Query: 121 GHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALK 163
G + TGE+Y VEP ++ FR LDVGL +TTTG R+FGA+K
Sbjct: 121 GCTDVTGEEYLVEPVDDGPGAFRCYLDVGLARTTTGARIFGAMK 164
>sp|Q58DW5|RL5_BOVIN 60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3
Length = 297
Score = 207 bits (527), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/164 (65%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YE
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 121 GHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFGALK 163
G VE TG++Y+VE + + F LD GL +TTTGN+VFGALK
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 164
>sp|P46777|RL5_HUMAN 60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3
Length = 297
Score = 207 bits (527), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 108/164 (65%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YE
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 121 GHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFGALK 163
G VE TG++Y+VE + + F LD GL +TTTGN+VFGALK
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 164
>sp|Q4R5M0|RL5_MACFA 60S ribosomal protein L5 OS=Macaca fascicularis GN=RPL5 PE=2 SV=3
Length = 297
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/164 (65%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI A I GD+++ +AYAH+LP+YG++VGLTNYAAAYCTGLLLARR+L MD YE
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHKLPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 121 GHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFGALK 163
G VE TG++Y+VE + + F LD GL +TTTGN+VFGALK
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 164
>sp|Q6JWW5|RL5_OIKDI 60S ribosomal protein L5 OS=Oikopleura dioica GN=RPL5 PE=3 SV=1
Length = 303
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 119/157 (75%), Gaps = 1/157 (0%)
Query: 8 KSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISA 67
K+KAYFKRYQ K+KRRREGKTDY AR RL QDKNKYNTPKYR VVR TNKDI AQI A
Sbjct: 18 KNKAYFKRYQPKFKRRREGKTDYFARKRLCVQDKNKYNTPKYRLVVRVTNKDIIAQIAYA 77
Query: 68 SIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATG 127
+ GD+++ SAYAHELPRYG+ VGLTNY+AAY TGLL+ RRVL+ +D+ YEG +E G
Sbjct: 78 RLQGDVIVTSAYAHELPRYGVSVGLTNYSAAYATGLLIGRRVLQKFGLDSMYEGQIEVDG 137
Query: 128 EDYSVEP-TENRRPFRALLDVGLVKTTTGNRVFGALK 163
+++ E + FR LD GL +T+TG R+FG LK
Sbjct: 138 DEFYEEADAAEKASFRCYLDTGLARTSTGARIFGVLK 174
>sp|O76190|RL5_BOMMO 60S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE=2 SV=1
Length = 299
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/164 (64%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+K YFKRYQVK+KRRREGKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
T Q+ + I GD ++ +AY+HELPRYG++VGLTNYAAAY TGLLLARR+L+ L +D Y
Sbjct: 61 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGLLLARRLLQRLGLDTLYT 120
Query: 121 GHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALK 163
G + TG++Y+VEP +N FR LDVGL +TTTG RVFGA+K
Sbjct: 121 GTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGRRVFGAMK 164
>sp|P26321|RL5_YEAST 60S ribosomal protein L5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL5 PE=1 SV=4
Length = 297
Score = 197 bits (500), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 122/164 (74%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
MAF K KS AY R+Q ++RRREGKTDY R RL+ Q K KYNTPKYR VVRFTNKDI
Sbjct: 1 MAFQKDAKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QIIS++I GD+VLA+AY+HELPRYG+ GLTN+AAAY TGLL+ARR L+ L +D Y+
Sbjct: 61 ICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQKLGLDETYK 120
Query: 121 GHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALK 163
G E GE E E+ RPF+ LD+GL +TTTG RVFGALK
Sbjct: 121 GVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALK 164
>sp|O74306|RL5B_SCHPO 60S ribosomal protein L5-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl5b PE=2 SV=1
Length = 294
Score = 194 bits (493), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 130/195 (66%), Gaps = 5/195 (2%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F KA KS YF RYQ KY+RRREGKTDY AR RLI Q KNKYN PKYR VVRF+N+ +
Sbjct: 1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFV 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
T QI+S+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L + + +YE
Sbjct: 61 TCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYE 120
Query: 121 GHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALKVIFK---FIQTSYDYI 176
G E GE E E+ RPF+ LDVGL +T+TG+RVFGA+K FI S +
Sbjct: 121 GVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRF 180
Query: 177 NGFS-TTLDLSDYLL 190
GF T +L D L
Sbjct: 181 PGFDIETEELDDETL 195
>sp|P52822|RL5A_SCHPO 60S ribosomal protein L5-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl5a PE=1 SV=2
Length = 294
Score = 194 bits (493), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 130/195 (66%), Gaps = 5/195 (2%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F KA KS YF RYQ KY+RRREGKTDY AR RLI Q KNKYN PKYR VVRF+N+ +
Sbjct: 1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFV 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
T QI+S+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L + + +YE
Sbjct: 61 TCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYE 120
Query: 121 GHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALKVIFK---FIQTSYDYI 176
G E GE E E+ RPF+ LDVGL +T+TG+RVFGA+K FI S +
Sbjct: 121 GVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRF 180
Query: 177 NGFS-TTLDLSDYLL 190
GF T +L D L
Sbjct: 181 PGFDIETEELDDETL 195
>sp|P09895|RL5_RAT 60S ribosomal protein L5 OS=Rattus norvegicus GN=Rpl5 PE=1 SV=3
Length = 297
Score = 194 bits (492), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 128/164 (78%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAYFKRYQV+++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YE
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 121 GHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFGALK 163
G VE G++Y+VE + + F LD GL +TTTGN+VFGALK
Sbjct: 121 GQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 164
>sp|P47962|RL5_MOUSE 60S ribosomal protein L5 OS=Mus musculus GN=Rpl5 PE=1 SV=3
Length = 297
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 127/164 (77%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAYFKRYQV+++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YE
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 121 GHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFGALK 163
G VE G +Y+VE + + F LD GL +TTTGN+VFGALK
Sbjct: 121 GQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 164
>sp|Q231U7|RL5_TETTS 60S ribosomal protein L5 OS=Tetrahymena thermophila (strain SB210)
GN=RPL5 PE=1 SV=2
Length = 301
Score = 188 bits (478), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/164 (58%), Positives = 121/164 (73%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAYFKR+Q KY+RRREG TDY AR RLI QDK+KYNTPKYR V R TN I
Sbjct: 1 MGFVKVLKTKAYFKRFQTKYRRRREGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
AQI+ A++ D VL +A ++EL R+G+ GL +YAAAY TGLLLARR+LK + +D Y
Sbjct: 61 IAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYA 120
Query: 121 GHVEATGEDYSV-EPTENRRPFRALLDVGLVKTTTGNRVFGALK 163
G + G ++V E + ++PF+A+LD GLV+TTTGNRVFG LK
Sbjct: 121 GQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLK 164
>sp|Q54XX3|RL5_DICDI 60S ribosomal protein L5 OS=Dictyostelium discoideum GN=rpl5 PE=1
SV=1
Length = 292
Score = 182 bits (462), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/164 (57%), Positives = 126/164 (76%), Gaps = 1/164 (0%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAY+ RYQV+++RRREGKTDY+ R RLI QDKNKYN+PKYR V R TN D+
Sbjct: 1 MGFVKVVKTKAYYSRYQVQFRRRREGKTDYQQRHRLITQDKNKYNSPKYRLVARITNTDV 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
AQ++ + I GD VL +AYAHELPR+G++VGLTNYA+ Y TGLLLARR+L L++ Y+
Sbjct: 61 IAQVVYSKIVGDFVLCAAYAHELPRFGVKVGLTNYASCYATGLLLARRLLAKLKLADLYK 120
Query: 121 GHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFGALK 163
G + G+ + V+P +++ RPF+A LDVGL +T+TG +VF LK
Sbjct: 121 GAEKVDGKVFLVKPVDDKPRPFKANLDVGLARTSTGAKVFAVLK 164
>sp|Q95276|RL5_PIG 60S ribosomal protein L5 (Fragment) OS=Sus scrofa GN=RPL5 PE=2 SV=3
Length = 125
Score = 163 bits (413), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 99/124 (79%)
Query: 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M F K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 61 TAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L M Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMXKIYG 120
Query: 121 GHVE 124
G VE
Sbjct: 121 GQVE 124
>sp|A5UL69|RL18_METS3 50S ribosomal protein L18P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl18p PE=3 SV=1
Length = 193
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 79/153 (51%), Gaps = 33/153 (21%)
Query: 11 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIA 70
A Y+V ++RRREGKTDY AR++L++ DK+ R VVR +N T Q+I +
Sbjct: 2 AQGSNYKVPFRRRREGKTDYAARMKLVDYDKS-------RLVVRLSNAHATVQVIDYAPE 54
Query: 71 GDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDY 130
GDI LASA + +L YG G +N +A Y TG L A+R L A G D
Sbjct: 55 GDITLASAVSKQLANYGYLGGASNTSAVYLTGYLCAKRAL--------------AKGVD- 99
Query: 131 SVEPTENRRPFRALLDVGLVKTTTGNRVFGALK 163
A+LD+GL G++VF ALK
Sbjct: 100 -----------SAILDIGLKSAIKGSKVFAALK 121
>sp|Q2FSH0|RL18_METHJ 50S ribosomal protein L18P OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rpl18p PE=3 SV=1
Length = 175
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 79/153 (51%), Gaps = 33/153 (21%)
Query: 11 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIA 70
A RY V ++RRREG+T+Y AR RL+ K R VVR TN+ I QII+A +
Sbjct: 2 ATGPRYFVAFRRRREGRTNYHARTRLVVATKP-------RMVVRKTNRHIICQIITAHME 54
Query: 71 GDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDY 130
GD +A + EL ++G E L N AAY TG+LLA R LK A EG
Sbjct: 55 GDRTHVAANSSELRKFGYEGSLNNTPAAYLTGMLLAVRALK-----AGQEG--------- 100
Query: 131 SVEPTENRRPFRALLDVGLVKTTTGNRVFGALK 163
A+LD+GL + T G RVF ALK
Sbjct: 101 ------------AILDIGLHRATPGARVFAALK 121
>sp|O26130|RL18_METTH 50S ribosomal protein L18P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl18p PE=3 SV=1
Length = 192
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 80/153 (52%), Gaps = 33/153 (21%)
Query: 11 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIA 70
A+ RY++ ++RRREGKTDYRAR +++ T K R VVR T + AQII+ +
Sbjct: 2 AHGPRYKLAFRRRREGKTDYRARYKMVE-------TGKSRLVVRITTYHVIAQIINVGMN 54
Query: 71 GDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDY 130
GD L SA++ +L + G G +N AAAY TG L +R LK EG E
Sbjct: 55 GDETLVSAHSKQLQKMGWLGGTSNTAAAYLTGYLCGKRALK--------EGIEE------ 100
Query: 131 SVEPTENRRPFRALLDVGLVKTTTGNRVFGALK 163
A+LD+GL G++VF ALK
Sbjct: 101 ------------AVLDIGLRPAIRGSKVFAALK 121
>sp|A7I5Q8|RL18_METB6 50S ribosomal protein L18P OS=Methanoregula boonei (strain 6A8)
GN=rpl18p PE=3 SV=1
Length = 174
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 76/153 (49%), Gaps = 33/153 (21%)
Query: 11 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIA 70
A RY V ++RRREG+TDY R +L+ D P R VVR TN+ I Q+++A +
Sbjct: 2 ATGPRYLVAFRRRREGRTDYYQRTKLVVAD-----AP--RMVVRRTNRHIIVQLVTAEME 54
Query: 71 GDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDY 130
GD L SA + EL +YG N AAY TGLL A + K G+D
Sbjct: 55 GDKTLVSANSAELEKYGYTGATANTPAAYLTGLLFAAKAKK--------------AGQD- 99
Query: 131 SVEPTENRRPFRALLDVGLVKTTTGNRVFGALK 163
A+LD+GL + T G RVF ALK
Sbjct: 100 -----------SAILDIGLNRATPGARVFAALK 121
>sp|A3CT16|RL18_METMJ 50S ribosomal protein L18P OS=Methanoculleus marisnigri (strain
ATCC 35101 / DSM 1498 / JR1) GN=rpl18p PE=3 SV=1
Length = 175
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 75/149 (50%), Gaps = 33/149 (22%)
Query: 15 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIV 74
RY V ++RR EGKTDY R+ L++ TP R VVR TN+ I Q++ + GD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 75 LASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEP 134
L +AY+ EL YG E + AAY TG+L A + L +A Y GE
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTGMLFAVKAL-----NAGY-------GE------ 100
Query: 135 TENRRPFRALLDVGLVKTTTGNRVFGALK 163
A+LD+GL + G RVF ALK
Sbjct: 101 --------AILDIGLARAKPGARVFAALK 121
>sp|B1L785|RL18_KORCO 50S ribosomal protein L18P OS=Korarchaeum cryptofilum (strain OPF8)
GN=rpl18p PE=3 SV=1
Length = 195
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 75/152 (49%), Gaps = 33/152 (21%)
Query: 15 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIV 74
RY+VK++RRREGKTDY R+ L+ K R VVR TN+ I Q I GD V
Sbjct: 6 RYKVKFRRRREGKTDYMKRLALLKSRKP-------RVVVRRTNRYIIVQFIGFKGEGDEV 58
Query: 75 LASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEP 134
+A A++ EL +YG G N AAY TG L A M A+ G E
Sbjct: 59 IAYAFSKELEKYGWPYGGKNLPAAYLTGYLAA--------MRAKKAGVTE---------- 100
Query: 135 TENRRPFRALLDVGLVKTTTGNRVFGALKVIF 166
A+LD+G +T G+R++ ALK +
Sbjct: 101 --------AILDIGRFPSTKGSRLYAALKGVL 124
>sp|P50562|RL18_HALSA 50S ribosomal protein L18P OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rpl18p PE=1 SV=3
Length = 183
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 47/188 (25%)
Query: 11 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIA 70
A RY+V +RRRE +TDY R+RL+ K R V R +NK +TAQ+++
Sbjct: 2 ATGPRYKVPMRRRREVRTDYHQRLRLLKSGKP-------RLVARKSNKHVTAQLVTTGPD 54
Query: 71 GDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDY 130
GD +ASA++ +L YG N AAY TGLL +R + D
Sbjct: 55 GDETVASAHSSDLDAYGWAAPTGNLPAAYLTGLLAGQRAV------------------DA 96
Query: 131 SVEPTENRRPFRALLDVGLVKTTTGNRVF----GAL----------KVIFKFIQTSYDYI 176
VE A+LD+GL T G++VF GA+ V+ + +T ++I
Sbjct: 97 GVE--------EAVLDIGLNTATPGSKVFAIQEGAIDAGLDVPHNDSVLADWSRTRGEHI 148
Query: 177 NGFSTTLD 184
++ +LD
Sbjct: 149 AEYAESLD 156
>sp|B0R675|RL18_HALS3 50S ribosomal protein L18P OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rpl18p PE=3 SV=1
Length = 183
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 47/188 (25%)
Query: 11 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIA 70
A RY+V +RRRE +TDY R+RL+ K R V R +NK +TAQ+++
Sbjct: 2 ATGPRYKVPMRRRREVRTDYHQRLRLLKSGKP-------RLVARKSNKHVTAQLVTTGPD 54
Query: 71 GDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDY 130
GD +ASA++ +L YG N AAY TGLL +R + D
Sbjct: 55 GDETVASAHSSDLDAYGWAAPTGNLPAAYLTGLLAGQRAV------------------DA 96
Query: 131 SVEPTENRRPFRALLDVGLVKTTTGNRVF----GAL----------KVIFKFIQTSYDYI 176
VE A+LD+GL T G++VF GA+ V+ + +T ++I
Sbjct: 97 GVE--------EAVLDIGLNTATPGSKVFAIQEGAIDAGLDVPHNDSVLADWSRTRGEHI 148
Query: 177 NGFSTTLD 184
++ +LD
Sbjct: 149 AEYAESLD 156
>sp|A2SPM1|RL18_METLZ 50S ribosomal protein L18P OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=rpl18p PE=3 SV=1
Length = 174
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 74/149 (49%), Gaps = 33/149 (22%)
Query: 15 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIV 74
RY V+++RRREG+TDY R RLI +N R VVR TN+ I Q+I+A + GD
Sbjct: 6 RYFVQFRRRREGRTDYYQRQRLIVSGRN-------RMVVRKTNRHIIIQLIAAQMDGDYT 58
Query: 75 LASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEP 134
L + EL +G + L N AAY TG+L A R K A YEG
Sbjct: 59 LVHVNSRELVNFGYKGYLGNTPAAYLTGMLFAVRAQK-----AGYEG------------- 100
Query: 135 TENRRPFRALLDVGLVKTTTGNRVFGALK 163
+ D+GL +TG RVF A+K
Sbjct: 101 --------GIADIGLQVASTGARVFAAIK 121
>sp|P14123|RL18_HALMA 50S ribosomal protein L18P OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rpl18p PE=1
SV=3
Length = 187
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 33/149 (22%)
Query: 11 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIA 70
A RY+V +RRRE +TDY R+RL+ + K R V R +NK + AQ+++
Sbjct: 2 ATGPRYKVPMRRRREARTDYHQRLRLLK-------SGKPRLVARKSNKHVRAQLVTLGPN 54
Query: 71 GDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDY 130
GD LASA++ +L YG E N +AY TGLL R E VE
Sbjct: 55 GDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRA---------QEAGVE------ 99
Query: 131 SVEPTENRRPFRALLDVGLVKTTTGNRVF 159
A+LD+GL T G++VF
Sbjct: 100 -----------EAVLDIGLNSPTPGSKVF 117
>sp|Q8TRS8|RL18_METAC 50S ribosomal protein L18P OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rpl18p PE=3
SV=1
Length = 174
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 37/153 (24%)
Query: 15 RYQVKYKRRREGKTDYRARIRLI--NQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGD 72
RY+V ++RRREG+T+Y R++L+ QD R VVR +++++ Q+I+ + GD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSRQD---------RVVVRKSSRNVQIQLIAPTPDGD 56
Query: 73 IVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSV 132
I +SA ++EL +YG N AAY TGLL LK L+ YEG
Sbjct: 57 ITYSSAVSNELAKYGYTGATGNTTAAYLTGLLFG---LKSLQKG--YEG----------- 100
Query: 133 EPTENRRPFRALLDVGLVKTTTGNRVFGALKVI 165
+LD+GL ++ G+RV+ ALK +
Sbjct: 101 ----------GILDIGLQASSAGSRVYAALKGV 123
>sp|A3DNC6|RL18_STAMF 50S ribosomal protein L18P OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl18p PE=3 SV=1
Length = 202
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 75/151 (49%), Gaps = 34/151 (22%)
Query: 15 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIV 74
RY+V +RRREGKT+Y R +++ RFVVR T K I QI++A GDI
Sbjct: 6 RYKVPKRRRREGKTNYYKRYKMVLSGHP-------RFVVRKTLKHIIVQIVTAKPEGDIT 58
Query: 75 LASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVE 133
+A+A++ EL +YG GL N AAY TGLL A R LK G Y+V
Sbjct: 59 IAAAHSRELYKKYGWMGGLGNTPAAYLTGLLAALRGLK--------------AGIKYAVP 104
Query: 134 PTENRRPFRALLDVGLVKTTTGNRVFGALKV 164
D+GL T G +VF A+K
Sbjct: 105 ------------DIGLHVPTRGAKVFAAIKA 123
>sp|Q46GB4|RL18_METBF 50S ribosomal protein L18P OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rpl18p PE=3 SV=1
Length = 174
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 33/151 (21%)
Query: 15 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIV 74
RY+V ++RRREG+T+Y R++L+ ++ R VVR + +++ Q+I+ + GDI
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLISKQD-------RVVVRKSARNVQIQLIAPTPEGDIT 58
Query: 75 LASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEP 134
+SA + EL +YG N AAY TGLL + LK YEG
Sbjct: 59 YSSAVSSELAKYGYTGVTGNTTAAYLTGLLFGLKSLKK-----GYEG------------- 100
Query: 135 TENRRPFRALLDVGLVKTTTGNRVFGALKVI 165
+LD+GL ++ G+RV+ ALK I
Sbjct: 101 --------GILDIGLQASSAGSRVYAALKGI 123
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,304,083
Number of Sequences: 539616
Number of extensions: 3267713
Number of successful extensions: 10878
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 10615
Number of HSP's gapped (non-prelim): 126
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)