BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025451
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 65 LKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQV 124
+KV M CEGC RKVRR ++G +GV V + K HKV V G DP KV+ R+ ++ ++V
Sbjct: 30 IKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGY-VDPNKVVARMSHRTGKKV 88
Query: 125 ELLSPIPKPTAAEEEKKA--EEKAPPKPEEKKEEPQV 159
EL +P A ++KAP + ++P V
Sbjct: 89 ELWPYVPYDVVAHPYAAGVYDKKAPSGYVRRVDDPGV 125
>sp|Q9L7Q2|ZMPB_STRPN Zinc metalloprotease ZmpB OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=zmpB PE=3 SV=2
Length = 1906
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 59/151 (39%), Gaps = 9/151 (5%)
Query: 3 EEEKKPPAAEEKKPEEAKKEEAAEKPQEKPAAAEEKKPAPEESKDAKAAKEEQSPPPPKE 62
E + AEE K E+A + A + ++ P E++ APEE K + +++ P +
Sbjct: 265 ESQPSDKPAEESKVEQAGEPVAPREDEKAPVEPEKQPEAPEEEKAVEETPKQEESTPDTK 324
Query: 63 IVLKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHR 122
V E + + + VE + KV GE P +
Sbjct: 325 AEETVEPKEETVNQSIEQPKVETPAVEKQTEPTEEPKVEQAGEPVAP-------REDEQA 377
Query: 123 QVELLSPIPKPTAAEEEKKAEEKAPPKPEEK 153
+ P +P EEEK EE PKPE+K
Sbjct: 378 PTAPVEPEKQPEVPEEEKAVEET--PKPEDK 406
Score = 35.4 bits (80), Expect = 0.37, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 4 EEKKPPAAEEKKPEEAKKEEAAEKPQEKPAAAEEKKPAPEESKDAKAAKEEQSPPPPKEI 63
EE K +AE EE E KP+EK A E +P+ + ++++K + + P ++
Sbjct: 233 EEGKEDSAEPAPVEEVGGE-VESKPEEKVAVKPESQPSDKPAEESKVEQAGEPVAPREDE 291
Query: 64 VLKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQ 123
V + A + + ++ E+ D K + + E+ +S Q
Sbjct: 292 KAPVEPEKQPEAPEEEKAVEETPKQEESTPDTKAEETVEPKEET---------VNQSIEQ 342
Query: 124 VELLSP-IPKPTAAEEEKKAE-----------EKAPPKPEEKKEEPQV 159
++ +P + K T EE K E E+AP P E +++P+V
Sbjct: 343 PKVETPAVEKQTEPTEEPKVEQAGEPVAPREDEQAPTAPVEPEKQPEV 390
Score = 32.7 bits (73), Expect = 2.4, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 60/159 (37%), Gaps = 43/159 (27%)
Query: 17 EEAKKEEAA---EKPQEKPAAAEEKKPAPEESKDAKAAKEEQSPPPPKEIVLKVYMHCEG 73
EEA KEEA E P+E+P + E KP + + KE+ + P P
Sbjct: 200 EEAPKEEAPKTEESPKEEPKS--EVKPTDDTLPKVEEGKEDSAEPAP------------- 244
Query: 74 CARKVRRCLKGFEGVEDVITDCKTHKVIVKGEK------ADPLKVLDRVQRKSHRQVEL- 126
E V + KV VK E A+ KV + + R+ E
Sbjct: 245 -----------VEEVGGEVESKPEEKVAVKPESQPSDKPAEESKVEQAGEPVAPREDEKA 293
Query: 127 -LSPIPKPTAAEEEK------KAEEKAPPKPEEKKEEPQ 158
+ P +P A EEEK K EE P E+ EP+
Sbjct: 294 PVEPEKQPEAPEEEKAVEETPKQEESTPDTKAEETVEPK 332
>sp|Q6CIG2|CCS1_KLULA Superoxide dismutase 1 copper chaperone OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=CCS1 PE=3 SV=1
Length = 245
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 62 EIVLKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSH 121
E V MHCE C +++CLK G+++V D K + + V+G A P +++ + K+
Sbjct: 10 EATYAVEMHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAA-PSAIINAL--KNC 66
Query: 122 RQVELLSPIPKPTAA 136
+ ++ KP +A
Sbjct: 67 GRDGIIRGTGKPNSA 81
>sp|Q8DQN5|ZMPB_STRR6 Zinc metalloprotease ZmpB OS=Streptococcus pneumoniae (strain ATCC
BAA-255 / R6) GN=zmpB PE=3 SV=1
Length = 1876
Score = 36.2 bits (82), Expect = 0.20, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 3 EEEKKPPAAEEKKPEEAKKEEAAEKPQEKPAAAEEKKPAPEESKDA-KAAKEEQSPPPPK 61
E + AEE K E+A + A K ++ P E + APEE K + K+E+S P K
Sbjct: 265 ESQPSDKPAEESKVEQAGEPVAPRKDEQAPVEPENQPEAPEEEKAVEETPKQEESTPDTK 324
Score = 34.7 bits (78), Expect = 0.62, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 1/142 (0%)
Query: 4 EEKKPPAAEEKKPEEAKKEEAAEKPQEKPAAAEEKKPAPEESKDAKAAKEEQSPPPPKEI 63
EE K +AE EE E KP+EK A E +P+ + ++++K + + P K+
Sbjct: 233 EEGKEDSAEPAPVEEVGGE-VESKPEEKVAVKPESQPSDKPAEESKVEQAGEPVAPRKDE 291
Query: 64 VLKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQ 123
V + A + + ++ E+ D K + + E+ K ++
Sbjct: 292 QAPVEPENQPEAPEEEKAVEETPKQEESTPDTKAEETVEPKEETKTAKGTQEEGKEGQAP 351
Query: 124 VELLSPIPKPTAAEEEKKAEEK 145
V+ ++P K T EK E +
Sbjct: 352 VQEVNPEYKVTTGTVEKSTESE 373
Score = 33.9 bits (76), Expect = 1.3, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 17 EEAKKEEAA---EKPQEKPAAAEEKKPAPEESKDAKAAKEEQSPPPPKEIVLKVYMHCEG 73
EEA KEEA E P+E+P + E KP + + KE+ + P P E V G
Sbjct: 200 EEAPKEEAPKTEESPKEEPKS--EVKPTDDTLPKVEEGKEDSAEPAPVEEV--------G 249
Query: 74 CARKVRRCLKGFEGVEDVITD--CKTHKVIVKGEKADPLK-----VLDRVQRKSHRQVEL 126
+ + K E +D + KV GE P K V Q ++ + +
Sbjct: 250 GEVESKPEEKVAVKPESQPSDKPAEESKVEQAGEPVAPRKDEQAPVEPENQPEAPEEEKA 309
Query: 127 LSPIPKPTAAEEEKKAEEKAPPKPEEK 153
+ PK + + KAEE PK E K
Sbjct: 310 VEETPKQEESTPDTKAEETVEPKEETK 336
>sp|B4LQ23|CLU_DROVI Protein clueless OS=Drosophila virilis GN=clu PE=3 SV=1
Length = 1465
Score = 35.8 bits (81), Expect = 0.32, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 5 EKKPPAAEEKKPEEAKKEEAAEKPQEKPAAAEEKKPAPEESKDAKAA----KEEQS 56
EK+ PA EK+ E EE EK +E+PA EE KP P E+K A+A +E QS
Sbjct: 735 EKELPAIAEKQ--EEPNEEQPEKTEEQPAEKEESKPTPSETKSAEAMVNAIREAQS 788
>sp|Q9JTB5|IF2_NEIMA Translation initiation factor IF-2 OS=Neisseria meningitidis
serogroup A / serotype 4A (strain Z2491) GN=infB PE=3
SV=1
Length = 962
Score = 35.4 bits (80), Expect = 0.35, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 2 GEEEKKPPAAEEKKPEEAKKEEA-AEK-PQEKPAAAEEKKPAPEESKDAKA 50
+ E P AAE K EE+K E+A A+K P +KPA +EK P+ ++ K
Sbjct: 161 AKAETAPVAAETKPAEESKAEKAQADKMPSKKPAEPKEKAAKPKHERNGKG 211
>sp|A9M1D5|IF2_NEIM0 Translation initiation factor IF-2 OS=Neisseria meningitidis
serogroup C (strain 053442) GN=infB PE=3 SV=1
Length = 962
Score = 35.4 bits (80), Expect = 0.35, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 2 GEEEKKPPAAEEKKPEEAKKEEA-AEK-PQEKPAAAEEKKPAPEESKDAKA 50
+ E P AAE K EE+K E+A A+K P +KPA +EK P+ ++ K
Sbjct: 161 AKAETAPVAAETKPAEESKAEKAQADKMPSKKPAEPKEKAAKPKHERNGKG 211
>sp|Q9XIB6|PLRX2_ARATH Pollen-specific leucine-rich repeat extensin-like protein 2
OS=Arabidopsis thaliana GN=PEX2 PE=1 SV=1
Length = 847
Score = 35.0 bits (79), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 9 PAAEEKKPEEAKKEEAAEKPQ-EKPAA--AEEKKPAPEESKDAKAAKEEQSPPPPK 61
P E+ KPEE+ K E + P+ KP + E + P P++ DA K +SPPPPK
Sbjct: 472 PKPEQPKPEESPKPEQPQIPEPTKPVSPPNEAQGPTPDDPYDASPVKNRRSPPPPK 527
>sp|B8FCY5|IF2_DESAA Translation initiation factor IF-2 OS=Desulfatibacillum
alkenivorans (strain AK-01) GN=infB PE=3 SV=1
Length = 1040
Score = 35.0 bits (79), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 13 EKKPE---EAKKEEAA-EKPQEKPAAAEEKKPAPEESKDAKAAKEEQSP 57
E KPE EAK EE A EKP E+P A EE+K APE+SK+ A+E P
Sbjct: 232 EAKPEIKAEAKAEEGAPEKPAEEPKAKEEQKAAPEDSKEEPKAEEPAQP 280
>sp|C1D8X2|IF2_LARHH Translation initiation factor IF-2 OS=Laribacter hongkongensis
(strain HLHK9) GN=infB PE=3 SV=1
Length = 959
Score = 34.3 bits (77), Expect = 0.90, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 1 MGEEEKKP--PAAEEKKPEEAKKEEAAEKPQEKPAAAEEKKPAPEESKDAKAAKEEQSPP 58
M E E +P PAAE + A + + KP E KP P +++ A+AAK E P
Sbjct: 116 MREPEARPQAPAAEPALKPADRVGAPAVRTERKP----EPKPEPAKAEPARAAKPEPKPE 171
Query: 59 PPK 61
P K
Sbjct: 172 PVK 174
>sp|Q64ZR4|IF2_BACFR Translation initiation factor IF-2 OS=Bacteroides fragilis (strain
YCH46) GN=infB PE=3 SV=1
Length = 1015
Score = 32.0 bits (71), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 113 LDRVQRKSHRQVELLSPIPKPTAAEEEKKAEEKAPPKPEEKKEEPQV 159
LD++ RK ++ P P+P AAEE+K AEE P E KKEE V
Sbjct: 116 LDKLNRKVEKEPVKEEPKPQPVAAEEKKVAEEVKPVVNEVKKEEVTV 162
>sp|Q5LIN1|IF2_BACFN Translation initiation factor IF-2 OS=Bacteroides fragilis (strain
ATCC 25285 / NCTC 9343) GN=infB PE=3 SV=1
Length = 1015
Score = 32.0 bits (71), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 113 LDRVQRKSHRQVELLSPIPKPTAAEEEKKAEEKAPPKPEEKKEEPQV 159
LD++ RK ++ P P+P AAEE+K AEE P E KKEE V
Sbjct: 116 LDKLNRKVEKEPVKEEPKPQPVAAEEKKVAEEVKPVVNEVKKEEVTV 162
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,401,535
Number of Sequences: 539616
Number of extensions: 4636939
Number of successful extensions: 80696
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 1060
Number of HSP's that attempted gapping in prelim test: 52857
Number of HSP's gapped (non-prelim): 19406
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)