BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025454
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RB77|PDCL3_PONAB Phosducin-like protein 3 OS=Pongo abelii GN=PDCL3 PE=2 SV=1
Length = 239
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 137/238 (57%), Gaps = 8/238 (3%)
Query: 13 GASTQWDDIQRKLGNLPPKPPAFKPSAFEPA---VDPDSVPKDKSWVDEKTEEELEELED 69
A T+W+DI RK G LPPK + + SV K ++ T EEL++ ED
Sbjct: 5 NADTEWNDILRKKGILPPKESLKELEEEAEEEQRILQQSVVKT---YEDMTLEELDDHED 61
Query: 70 DPDLDDDRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYK 129
+ + +D+R +E YR++RLAE + ++FG V+ ISG D+V+EV++A +WV++ LYK
Sbjct: 62 EFNEEDERAIEMYRRQRLAEWKVTKLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYK 121
Query: 130 DGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGL 189
G C L+ Q L LARK+P KF+K IST CIPNYPDRNLPT+ VY G +KA ++G
Sbjct: 122 QGIPLCALINQHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTIFVYLEGDIKAQFIGP 181
Query: 190 RSF-GRRCTPEGVALVLCQSDPVLNDGQSG-SDPSRKTVLEGVRKRLIEKVVAEHEDD 245
F G T + + L +S ++ D + P +L VR+ + K ++ E D
Sbjct: 182 LVFGGMNLTRDELEWKLSESGAIMTDLEENPKKPIEDVLLSSVRRSALMKRDSDSEGD 239
>sp|Q4KLJ8|PDCL3_RAT Phosducin-like protein 3 OS=Rattus norvegicus GN=Pdcl3 PE=2 SV=1
Length = 240
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 115/183 (62%), Gaps = 3/183 (1%)
Query: 13 GASTQWDDIQRKLGNLPPKPPAFKPSAFEPAVDPDSVPKD--KSWVDEKTEEELEELEDD 70
A T+W+DI RK G LPPK + E + + + K++ D T EEL+E ED+
Sbjct: 5 NADTEWNDILRKKGILPPKESLKELEEEEEGKEEQRLQQSVVKTYED-MTLEELQENEDE 63
Query: 71 PDLDDDRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKD 130
+D+R +E YR++RLAE + ++FG V+ ISG D+V+EV++A +WVV+ LYK
Sbjct: 64 FSEEDERAIEMYRQQRLAEWKATQLRNKFGEVLEISGKDYVQEVTKAGEGLWVVLHLYKQ 123
Query: 131 GFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLR 190
G C L+ L LARK+P KF+K IST CIPNYPDRNLPTV VY G +KA ++G
Sbjct: 124 GIPLCSLINHHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTVFVYREGDIKAQFIGPL 183
Query: 191 SFG 193
FG
Sbjct: 184 VFG 186
>sp|Q8MR62|VIAF1_DROME Viral IAP-associated factor homolog OS=Drosophila melanogaster
GN=viaf PE=1 SV=1
Length = 240
Score = 151 bits (382), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 144/249 (57%), Gaps = 42/249 (16%)
Query: 16 TQWDDIQRKLGNLPPKPPAFKPSAFEPAVDPDSVPK-------------------DKSWV 56
T+W+D+ R G + PK A E + D + K DK +
Sbjct: 8 TEWNDVLRAKGIIGPK-------AKEAEITEDQIQKLMDDAIQRRTDLPLNEGQRDKK-I 59
Query: 57 DEKTEEELEELEDDPDLDDDRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQ 116
D+ + +EL+ELED +D+ LE+YR++R+AEMR + +RFGSV ISG D+V EV++
Sbjct: 60 DDMSLDELDELEDS---EDEAVLEQYRQRRIAEMRATAEKARFGSVREISGQDYVNEVTK 116
Query: 117 APPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLV 176
A +WVV+ LY +G C L+ +++LA ++P TKFV+ ++T CIPN+P++NLPT+ +
Sbjct: 117 AGEGIWVVLHLYANGVPLCALIHHHMQQLAVRFPQTKFVRSVATTCIPNFPEKNLPTIFI 176
Query: 177 YNNGAVKANYVG-LRSFGRRCTPEGVALVLCQSDPVLNDGQSGSDPSRKTVLEGVRKRLI 235
Y+ GA++ Y+G L G + T E + +L GQ+G+ P+ T E R ++
Sbjct: 177 YHEGALRKQYIGPLELRGDKLTAEELEFML---------GQAGAVPTEIT--EDPRPQIR 225
Query: 236 EKVVAEHED 244
+K++A+ ED
Sbjct: 226 DKMLADLED 234
>sp|Q9H2J4|PDCL3_HUMAN Phosducin-like protein 3 OS=Homo sapiens GN=PDCL3 PE=1 SV=1
Length = 239
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 138/237 (58%), Gaps = 8/237 (3%)
Query: 14 ASTQWDDIQRKLGNLPPKPPAFKPSAFEPA---VDPDSVPKDKSWVDEKTEEELEELEDD 70
A T+W+DI RK G LPPK + + SV K ++ T EELE+ ED+
Sbjct: 6 ADTEWNDILRKKGILPPKESLKELEEEAEEEQRILQQSVVKT---YEDMTLEELEDHEDE 62
Query: 71 PDLDDDRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKD 130
+ +D+R +E YR++RLAE + ++FG V+ ISG D+V+EV++A +WV++ LYK
Sbjct: 63 FNEEDERAIEMYRRRRLAEWKATKLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYKQ 122
Query: 131 GFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLR 190
G C L+ Q L LARK+P KF+K IST CIPNYPDRNLPT+ VY G +KA ++G
Sbjct: 123 GIPLCALINQHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTIFVYLEGDIKAQFIGPL 182
Query: 191 SF-GRRCTPEGVALVLCQSDPVLNDGQSG-SDPSRKTVLEGVRKRLIEKVVAEHEDD 245
F G T + + L +S ++ D + P +L VR+ ++ K ++ E D
Sbjct: 183 VFGGMNLTRDELEWKLSESGAIMTDLEENPKKPIEDVLLSSVRRSVLMKRDSDSEGD 239
>sp|Q6P268|PDCL3_DANRE Phosducin-like protein 3 OS=Danio rerio GN=pdcl3 PE=2 SV=1
Length = 239
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 115/182 (63%), Gaps = 4/182 (2%)
Query: 13 GASTQWDDIQRKLGNLPPK-PPAFKPSAFEPAVDPDSVPKDKSWVDEKTEEELEELEDDP 71
A T+W+DI RK G LPPK P + + + SV K ++ T EELEE ED+
Sbjct: 5 NADTEWNDILRKKGILPPKETPVEEEEDEQLHLQSQSVVKT---YEDMTLEELEENEDEF 61
Query: 72 DLDDDRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDG 131
+D+ +E YR KRLAE + + FG + ISG D+V+EV++A +WVV+ LYK G
Sbjct: 62 SEEDEHAMEMYRLKRLAEWKANQMKNVFGELKEISGQDYVQEVNKAGEGIWVVLHLYKQG 121
Query: 132 FAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRS 191
C L+ Q L +LARK+P +KF+K IS+ CIPNYPDRNLPT+ VY +G +KA ++G
Sbjct: 122 IPLCSLINQHLAQLARKFPQSKFLKSISSTCIPNYPDRNLPTLFVYRDGEMKAQFIGPLV 181
Query: 192 FG 193
FG
Sbjct: 182 FG 183
>sp|Q8BVF2|PDCL3_MOUSE Phosducin-like protein 3 OS=Mus musculus GN=Pdcl3 PE=1 SV=1
Length = 240
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Query: 14 ASTQWDDIQRKLGNLPPKPPAFKPSAFEPAVDPDSVPKD--KSWVDEKTEEELEELEDDP 71
A T+W+DI RK G LPPK + E + + + K++ D T EELEE ED+
Sbjct: 6 ADTEWNDILRKKGILPPKESLKELEEEEAEKEEQLLQQSVVKTYED-MTLEELEENEDEF 64
Query: 72 DLDDDRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDG 131
+D+R +E YR++RLAE + ++FG V+ ISG D+V+EV++A +WV++ LYK G
Sbjct: 65 SEEDERAIEMYRQQRLAEWKATQLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYKQG 124
Query: 132 FAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRS 191
C L+ L LARK+P KF+K IST CIPNYPDRNLPTV VY G +KA ++G
Sbjct: 125 IPLCSLINHHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTVFVYREGDIKAQFIGPLV 184
Query: 192 FG 193
FG
Sbjct: 185 FG 186
>sp|Q0VCW8|PDCL3_BOVIN Phosducin-like protein 3 OS=Bos taurus GN=PDCL3 PE=2 SV=1
Length = 240
Score = 133 bits (335), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 115/185 (62%), Gaps = 7/185 (3%)
Query: 13 GASTQWDDIQRKLGNLPPKPP----AFKPSAFEPAVDPDSVPKDKSWVDEKTEEELEELE 68
A T+W+DI RK G LP K + E + S+ K ++ T EELE+ E
Sbjct: 5 NADTEWNDILRKKGILPSKEDLKDLEKEAEEEEQRILQQSIVKT---YEDMTLEELEDNE 61
Query: 69 DDPDLDDDRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILY 128
D+ + +D+R +E YR++RLAE + ++FG V+ ISG D+V+EV++A +WV++ LY
Sbjct: 62 DEFNEEDERAIEMYRQQRLAEWKATQLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLY 121
Query: 129 KDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVG 188
K G C L+ Q L LARK+P KF+K IST CIP+YPDRNLPTV VY G +KA ++G
Sbjct: 122 KQGIPLCALINQHLSALARKFPDVKFIKAISTTCIPSYPDRNLPTVFVYLEGDIKAQFIG 181
Query: 189 LRSFG 193
FG
Sbjct: 182 PLVFG 186
>sp|Q8N4E4|PDCL2_HUMAN Phosducin-like protein 2 OS=Homo sapiens GN=PDCL2 PE=1 SV=2
Length = 241
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 104/178 (58%), Gaps = 2/178 (1%)
Query: 16 TQWDDIQRKLGNLPPKPPAFKPSAFEPAVDPDSVPKDKSWVDEKTEEELEELEDDPDLDD 75
T+W+DI R G LPPK + K E + K + ++ T +L+E ED+ D +D
Sbjct: 8 TEWNDILRDFGILPPKEES-KDEIEEMVLRLQKEAMVKPF-EKMTLAQLKEAEDEFDEED 65
Query: 76 DRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAEC 135
+ +E YRKKRL E + K +FG + ISG+ +V EV+ A DVWV++ LY+ C
Sbjct: 66 MQAVETYRKKRLQEWKALKKKQKFGELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMC 125
Query: 136 GLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFG 193
L+ Q L LARK+P TKFVK I CI +Y D LPT+ VY NG ++A ++G+ G
Sbjct: 126 LLVNQHLSLLARKFPETKFVKAIVNSCIQHYHDNCLPTIFVYKNGQIEAKFIGIIECG 183
>sp|Q32LN3|PDCL2_BOVIN Phosducin-like protein 2 OS=Bos taurus GN=PDCL2 PE=2 SV=1
Length = 242
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 4/179 (2%)
Query: 16 TQWDDIQRKLGNLPPKP-PAFKPSAFEPAVDPDSVPKDKSWVDEKTEEELEELEDDPDLD 74
T+W++I R G LPPK P + + +++ K ++ T EL+E ED+ D +
Sbjct: 8 TEWNEILRDFGILPPKEEPKDEIEEMVLRLQKEAMVKP---YEKMTLAELKEAEDEFDDE 64
Query: 75 DDRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAE 134
D + +E YR+KRL E + K +FG + ISG+ +V EV+ A DVWV++ LY+
Sbjct: 65 DMKAIEIYREKRLQEWKALKKKQKFGELREISGNQYVNEVTNAEKDVWVIIHLYRSSIPL 124
Query: 135 CGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFG 193
C L+ Q L LARK+P TKFVK I+ CI +Y D LPT+ VY NG ++ ++G+ G
Sbjct: 125 CLLVNQHLSLLARKFPETKFVKAIANSCIEHYHDNCLPTIFVYKNGQIEGKFIGIIECG 183
>sp|Q78Y63|PDCL2_MOUSE Phosducin-like protein 2 OS=Mus musculus GN=Pdcl2 PE=1 SV=1
Length = 240
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 104/179 (58%), Gaps = 4/179 (2%)
Query: 16 TQWDDIQRKLGNLPPKP-PAFKPSAFEPAVDPDSVPKDKSWVDEKTEEELEELEDDPDLD 74
T+W++I R G LPPK P + + +++ K ++ T +L+E ED+ D +
Sbjct: 8 TEWNEILRNFGILPPKEEPKDEIEEMVLRLQQEAMVKP---YEKMTLAQLKEAEDEFDEE 64
Query: 75 DDRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAE 134
D + +E YR+KRL E + K +FG + ISG+ +V EV+ A D+WVV+ LY+
Sbjct: 65 DIKAIEIYREKRLQEWKALKKKQKFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPM 124
Query: 135 CGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFG 193
C ++ Q L LARK+P TKFVK I CI +Y D LPT+ VY NG ++ ++G+ G
Sbjct: 125 CLVVNQHLSVLARKFPETKFVKAIVNSCIEHYHDNCLPTIFVYKNGQIEGKFIGIIECG 183
>sp|Q71A38|PHLP2_DICDI Phosducin-like protein 2 OS=Dictyostelium discoideum GN=phlp2 PE=2
SV=2
Length = 239
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Query: 14 ASTQWDDIQRKLGNLPPKPPAFKPSAFEPAVDPDSVPKDKSWVDEKTEE-ELEELEDDPD 72
T+W+DIQ K GN+ P + + ++ +EK E L++L+D D
Sbjct: 4 GKTEWEDIQIKYGNMEAPPKQLTEDELFDLIKEAAEMATEAEKNEKLENASLKDLKDMED 63
Query: 73 LDDDRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGF 132
+D+ LE+ RKKR+ +M+ ++++FG + IS + EV++ V VVV L+K+G
Sbjct: 64 DEDEDVLEQLRKKRIQQMKVEAELNKFGELKEISEPSYKSEVTECK-GVMVVVHLFKNGI 122
Query: 133 AECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSF 192
+C L+ Q L LA+K+ ATKFVKI S + I NYPD+NLPT+LVY NG + + LR+
Sbjct: 123 PQCQLVNQHLTILAKKFKATKFVKIRSEEAIHNYPDKNLPTILVYFNGDIVGQIITLRAT 182
Query: 193 GRRCT 197
G T
Sbjct: 183 GGDAT 187
>sp|Q9Y7L1|YGI9_SCHPO Phosducin-like protein C2A9.09 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC2A9.09 PE=1 SV=2
Length = 233
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 98/182 (53%), Gaps = 4/182 (2%)
Query: 16 TQWDDIQRKLGNLPPKPPAFKPSAFEPAVDPDSVPKDKSWVDEKTEEELEELEDDPDLDD 75
T+W+DI R G LP K P + VD + + ++ +E E +++ D
Sbjct: 7 TEWNDILRSKGILPEKEPDVDDVLDDALVDAKQLAHENRLENKDLDELAELEDEE----D 62
Query: 76 DRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAEC 135
D FL+ YR KR+ E ++ ++FGSV PIS ++ EV+ A +V+VVV +++D C
Sbjct: 63 DEFLQMYRNKRMQEWKDQMSKAKFGSVYPISKPEYTAEVTDASKEVFVVVHMFQDSLPAC 122
Query: 136 GLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRR 195
LL LE LA YP KFVKI + NYP+ +PT+L+Y +G ++ + L + G
Sbjct: 123 KLLAAILERLAPMYPQIKFVKIPGKQAVENYPEAMMPTLLIYGHGDLQQQILTLATLGGM 182
Query: 196 CT 197
T
Sbjct: 183 NT 184
>sp|Q71A39|PHLP1_DICDI Phosducin-like protein 1 OS=Dictyostelium discoideum GN=phlp1 PE=2
SV=1
Length = 316
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 66 ELEDDPDLDDDRFLEEYRKKRLAEMREATKISR---------FGSVMPISGSDFVREVSQ 116
E E+ D DDD LE RK R+ + + +I+ FG I S ++ E+
Sbjct: 134 EEENQLDSDDDD-LERIRKARMEQWKSKQQITSDVKKPEKKVFGYFKQIDSSQYIHEIDN 192
Query: 117 APPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLV 176
PP+V+V++ L+++ EC LL Q L +LA KY KF+KI+S + NY D LP++LV
Sbjct: 193 EPPNVFVIIHLFQNYIPECVLLNQQLGQLAVKYRYIKFLKILSKEAKENYHDEALPSLLV 252
Query: 177 YNNGAVKANYVGL-RSFGRRCTPEGVALVLCQSDPVLN 213
Y G + ++V L GR E + L+L D + N
Sbjct: 253 YIGGKLLVSFVPLTEELGRNFDQEDLELLLSSYDIIPN 290
>sp|Q9VUR7|PHLP_DROME Phosducin-like protein OS=Drosophila melanogaster GN=CG7650 PE=1
SV=2
Length = 276
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
Query: 61 EEELEELEDDPDLDD---DRFLEEYRKKRLAEM-REATKISRFGSVMPI-SGSDFVREVS 115
EE + E D +LD+ + FL++Y+K+R+AEM R+ +FG V + S +F+ V
Sbjct: 111 EERKRQEELDAELDELMSEDFLQQYQKQRMAEMLRQTGHHQQFGQVQQLTSHEEFLACVE 170
Query: 116 QAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST--DCIPNYPDRNLPT 173
Q +++ +Y+ A C L +CL+ LA YP+ KF KI S+ ++ + LP
Sbjct: 171 QENKHTTIIIHIYERQLAACATLNKCLDSLASDYPSIKFAKICSSVAGMSRDFRTKGLPA 230
Query: 174 VLVYNNGAVKANYVGL 189
+LVY AV N+V L
Sbjct: 231 LLVYKAQAVIGNFVRL 246
>sp|Q9DBX2|PHLP_MOUSE Phosducin-like protein OS=Mus musculus GN=Pdcl PE=1 SV=1
Length = 301
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 70 DPDLDDDRFLEEYRKKRLAEMREA-TKISRFGSVMPI-SGSDFVREVSQAPPDVWVVVIL 127
D +LDD+ FL++YRK+R+ EMR+ K +F V I SG F+ + + ++V +
Sbjct: 128 DKNLDDEEFLQQYRKQRMEEMRQQFHKGPQFKQVFEIPSGEGFLDMIDKEQKSTLIMVHI 187
Query: 128 YKDGFAECGLLMQCLEELARKYPATKFVKIIST--DCIPNYPDRNLPTVLVYNNGAVKAN 185
Y+DG + C+ LA +YPA KF ++ S+ + LP +L+Y G + N
Sbjct: 188 YEDGVPGTEAMNGCMICLATEYPAVKFCRVRSSVIGASSRFTRNALPALLIYKAGELIGN 247
Query: 186 YV 187
+V
Sbjct: 248 FV 249
>sp|Q13371|PHLP_HUMAN Phosducin-like protein OS=Homo sapiens GN=PDCL PE=1 SV=3
Length = 301
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 70 DPDLDDDRFLEEYRKKRLAEMREAT-KISRFGSVMPIS-GSDFVREVSQAPPDVWVVVIL 127
+ D DD+ FL++YRK+R+ EMR+ K +F V IS G F+ + + + ++V +
Sbjct: 128 NEDQDDEEFLQQYRKQRMEEMRQQLHKGPQFKQVFEISSGEGFLDMIDKEQKSIVIMVHI 187
Query: 128 YKDGFAECGLLMQCLEELARKYPATKFVKIIST--DCIPNYPDRNLPTVLVYNNGAVKAN 185
Y+DG + C+ LA +YPA KF K+ S+ + LP +L+Y G + N
Sbjct: 188 YEDGIPGTEAMNGCMICLAAEYPAVKFCKVKSSVIGASSQFTRNALPALLIYKGGELIGN 247
Query: 186 YV 187
+V
Sbjct: 248 FV 249
>sp|Q63737|PHLP_RAT Phosducin-like protein OS=Rattus norvegicus GN=Pdcl PE=1 SV=1
Length = 301
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 70 DPDLDDDRFLEEYRKKRLAEMREAT-KISRFGSVMPI-SGSDFVREVSQAPPDVWVVVIL 127
D +LDD+ FL++YRK+R+ EMR+ K +F V+ I SG F+ + + ++V +
Sbjct: 128 DKNLDDEEFLQQYRKQRMDEMRQQLHKGPQFKQVLEIPSGEGFLDMIDKEQKSTLIMVHI 187
Query: 128 YKDGFAECGLLMQCLEELARKYPATKFVKIIST--DCIPNYPDRNLPTVLVYNNGAVKAN 185
Y+DG + C+ LA +YP KF ++ S+ + LP +L+Y G + N
Sbjct: 188 YEDGVPGTEAMNGCMICLAAEYPTVKFCRVRSSVIGASSRFTRNALPALLIYKAGELIGN 247
Query: 186 YV 187
+V
Sbjct: 248 FV 249
>sp|Q2HJA9|PHLP_BOVIN Phosducin-like protein OS=Bos taurus GN=PDCL PE=2 SV=1
Length = 301
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 70 DPDLDDDRFLEEYRKKRLAEMREATKIS-RFGSVMPI-SGSDFVREVSQAPPDVWVVVIL 127
+ D DD+ FL++YRK+R+ EMR+ +F V I SG F+ + + ++V +
Sbjct: 128 NEDQDDEEFLQQYRKQRMEEMRQQLYQGPQFKQVFEIPSGEGFLDMIDKEQRSTLIMVHI 187
Query: 128 YKDGFAECGLLMQCLEELARKYPATKFVKIIST--DCIPNYPDRNLPTVLVYNNGAVKAN 185
Y+DG + C+ LA +YPA KF ++ S+ + LP +L+Y G + N
Sbjct: 188 YEDGIPGTEAMNGCMLCLAAEYPAVKFCRVRSSVIGASSRFTRNALPALLIYKGGELIGN 247
Query: 186 YV 187
+V
Sbjct: 248 FV 249
>sp|Q12017|PLP2_YEAST Phosducin-like protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PLP2 PE=1 SV=1
Length = 286
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 24/201 (11%)
Query: 12 EGASTQWDDIQRKLGNLPPKPPAFKPSA-FEPAVDPDSVPKDKSWVDEKTEEELEELEDD 70
E ++W+DI R G +P + P+ P+A E A++ + ++ +++K +LEELEDD
Sbjct: 13 ESEDSEWNDILRAKGVIPERAPS--PTAKLEEALEEAIAKQHENRLEDKDLSDLEELEDD 70
Query: 71 PDLDDDRFLEEYRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPP----------- 119
D D Y+ KRL E+R+ + S+FG V I+ ++ +EV+ A
Sbjct: 71 EDEDFLE---AYKIKRLNEIRKLQERSKFGEVFHINKPEYNKEVTLASQGKKYEGAQTND 127
Query: 120 -------DVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLP 172
V+V V L + +L + A K+ KFV+I + I NYP+ N P
Sbjct: 128 NGEEDDGGVYVFVHLSLQSKLQSRILSHLFQSAACKFREIKFVEIPANRAIENYPESNCP 187
Query: 173 TVLVYNNGAVKANYVGLRSFG 193
T++VY G V N + L G
Sbjct: 188 TLIVYYRGEVIKNMITLLELG 208
>sp|P20942|PHOS_RAT Phosducin OS=Rattus norvegicus GN=Pdc PE=1 SV=1
Length = 246
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 72 DLDDDRFLEEYRKKRLAEMREATKIS-RFGSVMPI-SGSDFVREVSQAPPDVWVVVILYK 129
D +D+ L +YR++ + +M + R+G V + +G F+ + + +VV +Y+
Sbjct: 83 DKEDEGCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYE 142
Query: 130 DGFAECGLLMQCLEELARKYPATKFVKIISTDCIPN--YPDRNLPTVLVYNNGAVKANYV 187
DG C L LE LA +YP KF KI +++ + LPT+LVY G + +N++
Sbjct: 143 DGVRGCDALNSSLECLAAEYPMVKFCKIRASNTGAGDRFSSDVLPTLLVYKGGELISNFI 202
Query: 188 GL 189
+
Sbjct: 203 SV 204
>sp|P19632|PHOS_BOVIN Phosducin OS=Bos taurus GN=PDC PE=1 SV=2
Length = 245
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 72 DLDDDRFLEEYRKKRLAEMREATKIS-RFGSVMPI-SGSDFVREVSQAPPDVWVVVILYK 129
D +D+ L +YR++ + +M + R+G V + SG F+ + + +VV +Y+
Sbjct: 83 DKEDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYE 142
Query: 130 DGFAECGLLMQCLEELARKYPATKFVKIISTDCIPN--YPDRNLPTVLVYNNGAVKANYV 187
DG C L L LA +YP KF KI +++ + LPT+LVY G + +N++
Sbjct: 143 DGIKGCDALNSSLICLAAEYPMVKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELLSNFI 202
Query: 188 GL 189
+
Sbjct: 203 SV 204
>sp|Q04004|PLP1_YEAST Phosducin-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PLP1 PE=1 SV=1
Length = 230
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 41 EPAVDPDSVPKDKSWVDEKTEEELEELEDDPDLDDDR-FLEEYRKKRLAEMREATKISR- 98
VD D DKS +E +E L EL D +LD+D FL YR +RL ++ + K +
Sbjct: 21 HTTVDSD----DKSSGEENLDELLNEL--DRELDEDHEFLSAYRSERLQQISDHLKQVKK 74
Query: 99 ------FGSVMPISGSDFVREVSQAPPDVWVVVILYK-DGFAECGLLMQCLEELARKYPA 151
+G + I D + Q +VVI ++ + F +C + + LE LA++Y
Sbjct: 75 NVEDDGYGRLQCI---DNEADAIQICTKTTMVVIHFELETFGKCQYMNEKLENLAKRYLT 131
Query: 152 TKFVKIISTDC---IPNYPDRNLPTVLVYNNGAVKANYVGLRSFG 193
T+F+K+ C + + LP V+ Y NG K YVG G
Sbjct: 132 TRFIKVNVQTCPFLVNKLNIKVLPFVVGYKNGLEKVRYVGFSKLG 176
>sp|Q9XS39|PHOS_HORSE Phosducin OS=Equus caballus GN=PDC PE=2 SV=1
Length = 245
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 72 DLDDDRFLEEYRKKRLAEMREATKIS-RFGSVMPI-SGSDFVREVSQAPPDVWVVVILYK 129
D +D+ L +YR++ + +M + R+G V + +G F+ + + +VV +Y+
Sbjct: 83 DKEDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKITTIVVHIYE 142
Query: 130 DGFAECGLLMQCLEELARKYPATKFVKIISTDCIPN--YPDRNLPTVLVYNNGAVKANYV 187
DG C L L LA +YP KF KI +++ + LPT+LVY G + +N++
Sbjct: 143 DGIKGCDALNSSLACLAAEYPMVKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELISNFL 202
Query: 188 GL 189
+
Sbjct: 203 SV 204
>sp|P41686|PHOS_FELCA Phosducin OS=Felis catus GN=PDC PE=2 SV=1
Length = 245
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 72 DLDDDRFLEEYRKKRLAEMREATKIS-RFGSVMPI-SGSDFVREVSQAPPDVWVVVILYK 129
D +D+ L +YR++ + +M + R+G V + +G F+ + + +VV +Y+
Sbjct: 83 DKEDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKITTIVVHIYE 142
Query: 130 DGFAECGLLMQCLEELARKYPATKFVKI--ISTDCIPNYPDRNLPTVLVYNNGAVKANYV 187
DG C L LA +YP KF KI +T + LPT+LVY G + +N++
Sbjct: 143 DGIKGCDALNSSFTCLAVEYPMVKFCKIKASNTGARDRFSSDVLPTLLVYKGGELISNFI 202
Query: 188 GL 189
+
Sbjct: 203 SV 204
>sp|Q9QW08|PHOS_MOUSE Phosducin OS=Mus musculus GN=Pdc PE=2 SV=1
Length = 244
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 72 DLDDDRFLEEYRKKRLAEMREATKIS-RFGSVMPI-SGSDFVREVSQAPPDVWVVVILYK 129
D +D+ L +YR++ + +M + R+G V + +G F+ + + +VV +Y+
Sbjct: 81 DKEDESCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYE 140
Query: 130 DGFAECGLLMQCLEELARKYPATKFVKIISTDCIPN--YPDRNLPTVLVYNNGAVKANYV 187
DG C L L LA +YP KF KI +++ + LPT+LVY G + +N++
Sbjct: 141 DGVRGCDALNSSLACLAVEYPMVKFCKIKASNTGAGDRFSTDVLPTLLVYKGGELISNFI 200
Query: 188 GL 189
+
Sbjct: 201 SV 202
>sp|O77560|PHOS_CANFA Phosducin OS=Canis familiaris GN=PDC PE=1 SV=2
Length = 245
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 72 DLDDDRFLEEYRKKRLAEMREATKIS-RFGSVMPI-SGSDFVREVSQAPPDVWVVVILYK 129
D +D+ L +YR++ + +M + R+G V + +G F+ + + +VV +Y+
Sbjct: 83 DKEDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKITTIVVHIYE 142
Query: 130 DGFAECGLLMQCLEELARKYPATKFVKIISTDCIPN--YPDRNLPTVLVYNNGAVKANYV 187
DG C L LA +YP KF KI +++ + LPT+L+Y G + +N++
Sbjct: 143 DGVKGCDALNSSFTCLAAEYPMVKFCKIKASNTGAGDRFSSDVLPTLLIYKGGELISNFI 202
Query: 188 GL 189
+
Sbjct: 203 SV 204
>sp|P20941|PHOS_HUMAN Phosducin OS=Homo sapiens GN=PDC PE=1 SV=1
Length = 246
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 74 DDDRFLEEYRKKRLAEMREATKIS-RFGSVMPI-SGSDFVREVSQAPPDVWVVVILYKDG 131
+D+ L +YR++ + +M + R+G V + +G F+ + + +VV +Y+DG
Sbjct: 85 EDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGKQFLETIEKELKITTIVVHIYEDG 144
Query: 132 FAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRN----LPTVLVYNNGAVKANYV 187
C L L LA +YP KF KI +++ DR LPT+L+Y G + +N++
Sbjct: 145 IKGCDALNSSLTCLAAEYPIVKFCKIKASN--TGAGDRFSLDVLPTLLIYKGGELISNFI 202
Query: 188 GL 189
+
Sbjct: 203 SV 204
>sp|Q71A37|PHLP3_DICDI Phosducin-like protein 3 OS=Dictyostelium discoideum GN=phlp3 PE=2
SV=1
Length = 184
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 79 LEEYRKKRLAEMREATKI-----SRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFA 133
L + R++R+ +++E +K+ S G + I DF++EV+ VVV Y F
Sbjct: 20 LAKIREQRMKQLKEESKLKQSFLSTHGELKEIDEQDFLKEVTGTDN---VVVHFYHSDFQ 76
Query: 134 ECGLLMQCLEELARKYPATKFVKIISTDC---IPNYPDRNLPTVLVYNNGAVKANYVGLR 190
C +L + LE LA+ + TKF+K+ + R LPT++ ++NG VG
Sbjct: 77 RCKILDKSLEILAKTHLGTKFLKVNAEKAQFFTGKLGIRILPTLVFFSNGIAVDRCVGFE 136
Query: 191 SFG 193
FG
Sbjct: 137 EFG 139
>sp|O14530|TXND9_HUMAN Thioredoxin domain-containing protein 9 OS=Homo sapiens GN=TXNDC9
PE=1 SV=2
Length = 226
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 22/171 (12%)
Query: 56 VDEKTEEELEELEDDPDLDDDRFLEEYRKKRLAEMREATKISR------FGSVMPI-SGS 108
V+E + E+++L+ +D+D LE ++KRL +R+A + + G I S
Sbjct: 25 VEEHLDSEIQKLDQ---MDEDE-LERLKEKRLQALRKAQQQKQEWLSKGHGEYREIPSER 80
Query: 109 DFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPD 168
DF +EV ++ VV Y+D C +L + L L++K+ TKF+K ++ + P +
Sbjct: 81 DFFQEVKESEN---VVCHFYRDSTFRCKILDRHLAILSKKHLETKFLK-LNVEKAPFLCE 136
Query: 169 R----NLPTVLVYNNGAVKANYVGLRSFGRR--CTPEGVALVLCQSDPVLN 213
R +PT+ + +G + VG G T E + L SD +LN
Sbjct: 137 RLHIKVIPTLALLKDGKTQDYVVGFTDLGNTDDFTTETLEWRLGSSD-ILN 186
>sp|Q9CQ79|TXND9_MOUSE Thioredoxin domain-containing protein 9 OS=Mus musculus GN=Txndc9
PE=1 SV=1
Length = 226
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
Query: 79 LEEYRKKRLAEMREATKISR------FGSVMPI-SGSDFVREVSQAPPDVWVVVILYKDG 131
LE ++KRLA +R+A + + G I S DF +EV ++ VV Y+D
Sbjct: 44 LELLKEKRLAALRKAQQQKQEWLSKGHGEYREIGSERDFFQEVKESEK---VVCHFYRDT 100
Query: 132 FAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDR----NLPTVLVYNNGAVKANYV 187
C +L + L LA+K+ TKF+K ++ + P +R +PT+ + +G + V
Sbjct: 101 TFRCKILDRHLAILAKKHLETKFLK-LNVEKAPFLCERLRIKVIPTLALLRDGKTQDYVV 159
Query: 188 GLRSFG 193
G G
Sbjct: 160 GFTDLG 165
>sp|Q8K581|TXND9_RAT Thioredoxin domain-containing protein 9 OS=Rattus norvegicus
GN=Txndc9 PE=2 SV=2
Length = 226
Score = 38.1 bits (87), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 15/126 (11%)
Query: 79 LEEYRKKRLAEMREATKISR------FGSVMPI-SGSDFVREVSQAPPDVWVVVILYKDG 131
LE ++KRLA +R+A + + G I S DF +EV ++ VV Y+D
Sbjct: 44 LELLKEKRLAALRKAQQQKQEWLSKGHGEYREIGSERDFFQEVKESEK---VVCHFYRDT 100
Query: 132 FAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDR----NLPTVLVYNNGAVKANYV 187
C +L + L LA+K+ TKF+K + + P +R +PT+ + +G + V
Sbjct: 101 TFRCKILDRHLAILAKKHLETKFLK-PNVEKAPFLCERLRIKVIPTLALLRDGKTQDYIV 159
Query: 188 GLRSFG 193
G G
Sbjct: 160 GFTDLG 165
>sp|P08058|THIO_RHOSH Thioredoxin OS=Rhodobacter sphaeroides GN=trxA PE=1 SV=3
Length = 106
Score = 38.1 bits (87), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 101 SVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST 160
S +P++ + F EV ++ DV VVV + + C + LEEL+++Y + ++
Sbjct: 2 STVPVTDATFDTEVRKS--DVPVVVDFWAEWCGPCRQIGPALEELSKEYAGKVKIVKVNV 59
Query: 161 DCIPNYPD----RNLPTVLVYNNGAVKANYVG 188
D P P R +P + ++ NG V +N VG
Sbjct: 60 DENPESPAMLGVRGIPALFLFKNGQVVSNKVG 91
>sp|P0AA30|THIO_SHIFL Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV=2
Length = 109
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD----CIPNYPDRNLPTVLVYN 178
++V + + C ++ L+E+A +Y V ++ D P Y R +PT+L++
Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 83
Query: 179 NGAVKANYVGLRSFGR 194
NG V A VG S G+
Sbjct: 84 NGEVAATKVGALSKGQ 99
>sp|P0AA28|THIO_SALTY Thioredoxin-1 OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=trxA PE=3 SV=2
Length = 109
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD----CIPNYPDRNLPTVLVYN 178
++V + + C ++ L+E+A +Y V ++ D P Y R +PT+L++
Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 83
Query: 179 NGAVKANYVGLRSFGR 194
NG V A VG S G+
Sbjct: 84 NGEVAATKVGALSKGQ 99
>sp|P0AA29|THIO_SALTI Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=2
Length = 109
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD----CIPNYPDRNLPTVLVYN 178
++V + + C ++ L+E+A +Y V ++ D P Y R +PT+L++
Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 83
Query: 179 NGAVKANYVGLRSFGR 194
NG V A VG S G+
Sbjct: 84 NGEVAATKVGALSKGQ 99
>sp|P0AA25|THIO_ECOLI Thioredoxin-1 OS=Escherichia coli (strain K12) GN=trxA PE=1 SV=2
Length = 109
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD----CIPNYPDRNLPTVLVYN 178
++V + + C ++ L+E+A +Y V ++ D P Y R +PT+L++
Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 83
Query: 179 NGAVKANYVGLRSFGR 194
NG V A VG S G+
Sbjct: 84 NGEVAATKVGALSKGQ 99
>sp|P0AA26|THIO_ECOL6 Thioredoxin-1 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=trxA PE=3 SV=2
Length = 109
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD----CIPNYPDRNLPTVLVYN 178
++V + + C ++ L+E+A +Y V ++ D P Y R +PT+L++
Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 83
Query: 179 NGAVKANYVGLRSFGR 194
NG V A VG S G+
Sbjct: 84 NGEVAATKVGALSKGQ 99
>sp|P0AA27|THIO_ECO57 Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA PE=1 SV=2
Length = 109
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD----CIPNYPDRNLPTVLVYN 178
++V + + C ++ L+E+A +Y V ++ D P Y R +PT+L++
Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 83
Query: 179 NGAVKANYVGLRSFGR 194
NG V A VG S G+
Sbjct: 84 NGEVAATKVGALSKGQ 99
>sp|O14095|PLP1_SCHPO Thioredoxin domain-containing protein plp1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=plp1 PE=1 SV=2
Length = 279
Score = 38.1 bits (87), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 68 EDDPDLDDDRF--LEE-----YRKKRLAEMR------EATKISRFGSVMPISGSDFVREV 114
E D +L+D F L+E YR++RL ++ EA K + + V +
Sbjct: 90 ESDSELEDALFSQLDEFDDTAYREQRLEMLKKEFARVEAAKEKGHMQFLTVENEREVMDF 149
Query: 115 SQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC---IPNYPDRNL 171
+ + V V+ Y F C ++ LE++A+ + TKF++I + + + + L
Sbjct: 150 TLSSKKV--VIHFYHPDFIRCKIIDSHLEKIAKVHWETKFIRIEAANAPFLVVKLGLKVL 207
Query: 172 PTVLVYNNGAVKANYVGLRSFGRR 195
P VL Y N + +G G +
Sbjct: 208 PAVLCYVNSQLVDKIIGFADLGNK 231
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 98 RFGSVMPISGSDFVREVSQAPPDVW----------VVVILYKDGFAECGLLMQCLEELAR 147
R+ SV+ S+ V+EV W V+V + C L+ ++ELA+
Sbjct: 61 RYSSVV-CKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAK 119
Query: 148 KYPATKFVKIISTDCIP----NYPDRNLPTVLVYNNGAVKANYVG 188
+Y V ++TD P Y R++PTVL + NG K + +G
Sbjct: 120 EYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIG 164
>sp|Q4UNK3|THIO_RICFE Thioredoxin OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=trxA PE=3 SV=2
Length = 105
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 105 ISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIP 164
++ S F +EV ++ D+ V+V + + C +L ++E++++ V ++ D P
Sbjct: 5 VTDSSFKKEVLES--DLPVLVDFWAEWCGPCKMLTPIIDEISKELKGKVKVLKMNIDENP 62
Query: 165 NYPD----RNLPTVLVYNNGAVKANYVGLR 190
N P R++PT++++ NG K +GL+
Sbjct: 63 NIPSEYGIRSIPTIMLFKNGEQKDTKIGLQ 92
>sp|O14096|TGTL_SCHPO Queuine tRNA-ribosyltransferase-like protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC2F3.13c PE=3 SV=4
Length = 649
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 68 EDDPDLDDDRF--LEE-----YRKKRLAEMR------EATKISRFGSVMPISGSDFVREV 114
E D +L+D F L+E YR++RL ++ EA K + + V +
Sbjct: 460 ESDSELEDALFSQLDEFDDTAYREQRLEMLKKEFARVEAAKEKGHMQFLTVENEREVMDF 519
Query: 115 SQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC---IPNYPDRNL 171
+ + V V+ Y F C ++ LE++A+ + TKF++I + + + + L
Sbjct: 520 TLSSKKV--VIHFYHPDFIRCKIIDSHLEKIAKVHWETKFIRIEAANAPFLVVKLGLKVL 577
Query: 172 PTVLVYNNGAVKANYVGLRSFGRR 195
P VL Y N + +G G +
Sbjct: 578 PAVLCYVNSQLVDKIIGFADLGNK 601
>sp|O18883|TXND9_BOVIN Thioredoxin domain-containing protein 9 OS=Bos taurus GN=TXNDC9
PE=2 SV=2
Length = 226
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 56 VDEKTEEELEELEDDPDLDDDRFLEEYRKKRLAEMREATKISR------FGSVMPI-SGS 108
V+E + E+++L+ +D+D LE ++KRL +++A + + G I S
Sbjct: 25 VEEHLDSEIQKLDQ---MDEDE-LERLKEKRLEALKKAQQQKQEWLSKGHGEYREIPSER 80
Query: 109 DFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPD 168
DF +E ++ VV Y+D C +L + L L++K+ TKF+K ++ + P +
Sbjct: 81 DFFQEDKESKK---VVCHFYRDSTFRCKILDRHLVILSKKHLETKFLK-LNVEKAPFLCE 136
Query: 169 R----NLPTVLVYNNGAVKANYVGLRSFG 193
R +PT+ + +G + VG G
Sbjct: 137 RLRIKVIPTLALVKDGKTQDFVVGFSDLG 165
>sp|Q92JR5|THIO_RICCN Thioredoxin OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7)
GN=trxA PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 108 SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYP 167
S F +EV ++ D+ V+V + + C +L ++E++++ V ++ D PN P
Sbjct: 8 SSFKKEVLES--DLPVLVDFWAEWCGPCKMLTPIIDEISKELQGKVKVLKMNIDENPNTP 65
Query: 168 D----RNLPTVLVYNNGAVKANYVGLR 190
R++PT++++ NG K +GL+
Sbjct: 66 SEYGIRSIPTIMLFKNGEQKDTKIGLQ 92
>sp|P57653|THIO_BUCAI Thioredoxin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
(strain APS) GN=trxA PE=3 SV=1
Length = 108
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 135 CGLLMQCLEELARKYPATKFVKIISTDCIPN----YPDRNLPTVLVYNNGAVKANYVGLR 190
C +L LEE++++Y V ++ + PN Y R++PT+L++NN V A VG
Sbjct: 35 CKILAPILEEISKEYSNKVIVGKLNIEENPNTAPVYSIRSIPTLLLFNNSEVLATKVGAV 94
Query: 191 S 191
S
Sbjct: 95 S 95
>sp|Q38W64|RS2_LACSS 30S ribosomal protein S2 OS=Lactobacillus sakei subsp. sakei
(strain 23K) GN=rpsB PE=3 SV=1
Length = 264
Score = 35.4 bits (80), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 4 YHFVYKDVEGASTQWDDIQRKLGNLPPKPPAFKPSAFEPAVDPDSVPKDKSWVDEKTEEE 63
Y ++ + G T WD IQ+++ L + FE +PK + + +K +E+
Sbjct: 90 YFVNHRWLGGTLTNWDTIQKRIKRLKEIKAMDEDGTFE------RLPKKEVALLKKQQEK 143
Query: 64 LEE----LEDDPDLDDDRFLEEYRKKRLAEMREATKIS 97
LE+ +ED P + D F+ + RK+R+A ++EA K++
Sbjct: 144 LEKFLGGIEDMPRIPDVMFVVDPRKERIA-IKEAQKLN 180
>sp|Q9ZP20|TRXM5_ORYSJ Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica
GN=TRXM PE=2 SV=1
Length = 172
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 115 SQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPN----YPDRN 170
S+AP V+V + C ++ ++ELA++Y ++TD PN Y R+
Sbjct: 82 SEAP----VLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRS 137
Query: 171 LPTVLVYNNGAVKANYVG 188
+PTVL++ NG K + +G
Sbjct: 138 IPTVLMFKNGEKKESVIG 155
>sp|Q06194|FA8_MOUSE Coagulation factor VIII OS=Mus musculus GN=F8 PE=2 SV=2
Length = 2319
Score = 35.0 bits (79), Expect = 0.57, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 36 KPSAFEPAVDPDSVPKDKSWVDEKTEEELEELEDDPDLDDDRFLEEYRKKRLAEMREATK 95
K E V DS P++ W + EE+E+ +DD + D F +Y ++R K
Sbjct: 336 KHDGMEAYVKVDSCPEESQWQKKNNNEEMEDYDDDLYSEMDMFTLDYDSSPFIQIRSVAK 395
>sp|O77784|IDH3B_BOVIN Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Bos
taurus GN=IDH3B PE=2 SV=2
Length = 385
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 136 GLLMQCLEELARKYPATKFVKIISTDC 162
GL +QC EE+A YP KF K+I +C
Sbjct: 227 GLFLQCCEEVAELYPKIKFEKMIIDNC 253
>sp|P09857|THIO_CHRVI Thioredoxin OS=Chromatium vinosum GN=trxA PE=1 SV=1
Length = 107
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 101 SVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST 160
S++ ++ F EV ++P V +V + D C + +E+A +Y +
Sbjct: 3 SIVHVTDDSFEEEVXKSPDPV--LVDYWADWCGPCKMXAPVXDEIADEYAGRVKXAKXNX 60
Query: 161 DCIPNYP----DRNLPTVLVYNNGAVKANYVGLRS 191
D PN P R +PT++++ G V+A VG S
Sbjct: 61 DENPNTPPRYGXRGIPTLMLFRGGEVEATKVGAVS 95
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,584,970
Number of Sequences: 539616
Number of extensions: 4909551
Number of successful extensions: 18339
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 18000
Number of HSP's gapped (non-prelim): 340
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)