Query 025454
Match_columns 252
No_of_seqs 368 out of 1931
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 10:40:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025454.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025454hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1a0r_P Phosducin, MEKA, PP33; 100.0 1.5E-35 5.2E-40 260.8 20.9 161 52-214 65-230 (245)
2 2trc_P Phosducin, MEKA, PP33; 100.0 1.3E-34 4.4E-39 250.2 18.6 158 53-212 53-215 (217)
3 3evi_A Phosducin-like protein 100.0 1.6E-32 5.3E-37 216.1 15.4 117 98-214 1-118 (118)
4 2dbc_A PDCL2, unnamed protein 99.9 1.5E-26 5E-31 184.3 14.1 124 94-217 4-128 (135)
5 3zzx_A Thioredoxin; oxidoreduc 99.9 1.4E-22 4.7E-27 155.5 12.8 99 102-208 2-104 (105)
6 2av4_A Thioredoxin-like protei 99.8 1.1E-20 3.9E-25 155.2 13.1 100 102-207 23-136 (160)
7 1v98_A Thioredoxin; oxidoreduc 99.8 8.2E-21 2.8E-25 150.6 10.6 122 77-207 9-135 (140)
8 2qsi_A Putative hydrogenase ex 99.8 8.3E-21 2.8E-25 152.9 10.1 102 98-208 14-121 (137)
9 2qgv_A Hydrogenase-1 operon pr 99.8 2.3E-20 7.9E-25 150.8 8.7 98 102-208 19-123 (140)
10 1gh2_A Thioredoxin-like protei 99.8 1.1E-18 3.8E-23 131.6 13.0 99 101-207 2-104 (107)
11 3gnj_A Thioredoxin domain prot 99.8 1.4E-18 4.9E-23 131.0 13.1 100 100-207 4-107 (111)
12 2pu9_C TRX-F, thioredoxin F-ty 99.8 3.9E-19 1.3E-23 134.9 10.0 102 98-207 3-108 (111)
13 4euy_A Uncharacterized protein 99.8 2.3E-19 7.9E-24 135.3 8.1 97 103-208 3-103 (105)
14 3d6i_A Monothiol glutaredoxin- 99.8 1.8E-18 6.1E-23 131.3 11.7 100 101-207 1-106 (112)
15 2trx_A Thioredoxin; electron t 99.8 4.8E-18 1.6E-22 127.7 12.8 100 100-207 2-105 (108)
16 1faa_A Thioredoxin F; electron 99.8 4.6E-18 1.6E-22 131.4 12.8 103 97-207 15-121 (124)
17 3qfa_C Thioredoxin; protein-pr 99.8 1.4E-18 4.9E-23 133.8 9.7 98 102-207 14-114 (116)
18 1xfl_A Thioredoxin H1; AT3G510 99.8 3.8E-18 1.3E-22 133.2 12.0 106 96-208 12-122 (124)
19 3f3q_A Thioredoxin-1; His TAG, 99.8 4.8E-18 1.7E-22 129.3 12.2 100 99-208 6-108 (109)
20 3qou_A Protein YBBN; thioredox 99.8 3.2E-18 1.1E-22 150.8 12.7 104 99-209 6-113 (287)
21 1t00_A Thioredoxin, TRX; redox 99.8 4.1E-18 1.4E-22 129.0 11.4 100 100-207 5-108 (112)
22 3m9j_A Thioredoxin; oxidoreduc 99.8 5.5E-18 1.9E-22 126.5 12.0 98 102-207 2-103 (105)
23 2voc_A Thioredoxin; electron t 99.8 8E-18 2.7E-22 128.4 13.1 98 101-208 2-103 (112)
24 3die_A Thioredoxin, TRX; elect 99.8 5.9E-18 2E-22 126.3 12.1 98 100-207 3-104 (106)
25 2oe3_A Thioredoxin-3; electron 99.8 3.5E-18 1.2E-22 131.6 10.7 101 98-207 10-113 (114)
26 3tco_A Thioredoxin (TRXA-1); d 99.8 1E-17 3.5E-22 125.4 12.9 101 99-208 3-107 (109)
27 2i4a_A Thioredoxin; acidophIle 99.8 8.2E-18 2.8E-22 125.8 12.3 101 100-208 2-106 (107)
28 2ppt_A Thioredoxin-2; thiredox 99.8 7.5E-18 2.6E-22 137.0 12.7 101 99-208 46-150 (155)
29 3emx_A Thioredoxin; structural 99.8 2.3E-18 7.8E-23 136.3 9.4 99 99-209 15-125 (135)
30 1ep7_A Thioredoxin CH1, H-type 99.8 5.5E-18 1.9E-22 128.1 11.0 102 100-208 2-109 (112)
31 2o8v_B Thioredoxin 1; disulfid 99.8 9.5E-18 3.2E-22 131.8 12.6 100 100-207 22-125 (128)
32 2l6c_A Thioredoxin; oxidoreduc 99.8 3.6E-18 1.2E-22 130.2 9.6 97 103-209 6-105 (110)
33 2e0q_A Thioredoxin; electron t 99.7 1.6E-17 5.3E-22 123.0 12.5 97 102-207 1-100 (104)
34 3hz4_A Thioredoxin; NYSGXRC, P 99.7 5.4E-18 1.8E-22 134.8 10.6 100 100-207 6-109 (140)
35 3dxb_A Thioredoxin N-terminall 99.7 1.3E-17 4.3E-22 142.8 13.6 104 97-208 9-116 (222)
36 2vim_A Thioredoxin, TRX; thior 99.7 1.9E-17 6.5E-22 123.1 12.8 98 102-207 1-102 (104)
37 3uvt_A Thioredoxin domain-cont 99.7 1.1E-17 3.7E-22 125.9 11.5 100 99-208 4-110 (111)
38 2yzu_A Thioredoxin; redox prot 99.7 1.7E-17 5.8E-22 124.0 12.5 100 100-208 1-104 (109)
39 2vlu_A Thioredoxin, thioredoxi 99.7 2E-17 7E-22 127.2 13.3 103 99-208 12-118 (122)
40 1thx_A Thioredoxin, thioredoxi 99.7 1.9E-17 6.3E-22 125.4 12.8 101 100-208 7-111 (115)
41 2xc2_A Thioredoxinn; oxidoredu 99.7 1.4E-17 4.8E-22 127.6 12.2 99 100-207 13-115 (117)
42 1r26_A Thioredoxin; redox-acti 99.7 1.3E-17 4.5E-22 130.7 12.1 96 102-207 21-120 (125)
43 2vm1_A Thioredoxin, thioredoxi 99.7 1.2E-17 4E-22 127.2 11.5 104 98-208 4-112 (118)
44 2wz9_A Glutaredoxin-3; protein 99.7 1.2E-17 4.2E-22 134.7 12.2 105 96-208 8-116 (153)
45 1ti3_A Thioredoxin H, PTTRXH1; 99.7 8E-18 2.7E-22 127.2 10.3 103 98-207 2-109 (113)
46 3d22_A TRXH4, thioredoxin H-ty 99.7 5.1E-18 1.7E-22 133.9 9.3 103 99-208 23-130 (139)
47 1dby_A Chloroplast thioredoxin 99.7 1.2E-17 4E-22 125.3 10.5 99 101-207 2-104 (107)
48 1fb6_A Thioredoxin M; electron 99.7 2E-17 7E-22 123.2 11.7 98 102-207 2-103 (105)
49 3h79_A Thioredoxin-like protei 99.7 7.8E-18 2.7E-22 131.2 9.7 103 99-209 14-127 (127)
50 1syr_A Thioredoxin; SGPP, stru 99.7 3.6E-17 1.2E-21 124.5 13.3 102 97-208 6-110 (112)
51 3gix_A Thioredoxin-like protei 99.7 1.4E-17 4.9E-22 134.6 11.4 99 102-207 5-118 (149)
52 1xwb_A Thioredoxin; dimerizati 99.7 4.6E-17 1.6E-21 121.5 13.0 98 102-207 2-104 (106)
53 1nsw_A Thioredoxin, TRX; therm 99.7 2.6E-17 8.8E-22 123.0 11.6 97 102-207 2-102 (105)
54 2i1u_A Thioredoxin, TRX, MPT46 99.7 2E-17 6.8E-22 126.7 10.9 102 99-208 11-116 (121)
55 1w4v_A Thioredoxin, mitochondr 99.7 3.3E-17 1.1E-21 126.4 11.9 99 101-207 14-116 (119)
56 1x5d_A Protein disulfide-isome 99.7 2.2E-17 7.5E-22 128.5 11.0 101 99-207 6-114 (133)
57 3p2a_A Thioredoxin 2, putative 99.7 3.1E-17 1.1E-21 131.0 11.9 101 99-208 37-141 (148)
58 2f51_A Thioredoxin; electron t 99.7 3.4E-17 1.2E-21 126.5 11.8 101 101-210 4-113 (118)
59 2l5l_A Thioredoxin; structural 99.7 2.9E-17 1E-21 129.7 11.1 103 99-208 8-124 (136)
60 3hxs_A Thioredoxin, TRXP; elec 99.7 3.1E-17 1.1E-21 129.4 11.1 104 98-208 20-137 (141)
61 1oaz_A Thioredoxin 1; immune s 99.7 1.9E-17 6.6E-22 129.3 8.9 100 100-207 3-120 (123)
62 2dj0_A Thioredoxin-related tra 99.7 1.4E-17 4.9E-22 131.5 7.9 93 99-192 6-109 (137)
63 1qgv_A Spliceosomal protein U5 99.7 2.3E-16 7.7E-21 126.5 13.6 105 102-207 5-118 (142)
64 2dj1_A Protein disulfide-isome 99.7 5.3E-17 1.8E-21 127.7 9.7 99 100-208 17-122 (140)
65 1mek_A Protein disulfide isome 99.7 5.1E-17 1.7E-21 123.4 9.2 100 100-208 7-115 (120)
66 3cxg_A Putative thioredoxin; m 99.7 4.8E-17 1.7E-21 128.5 9.4 101 99-208 19-127 (133)
67 2dml_A Protein disulfide-isome 99.7 4.3E-17 1.5E-21 126.7 8.7 100 100-207 17-121 (130)
68 3aps_A DNAJ homolog subfamily 99.7 3.6E-17 1.2E-21 125.8 7.9 105 100-208 3-111 (122)
69 2j23_A Thioredoxin; immune pro 99.7 1.3E-16 4.3E-21 123.6 10.6 102 97-208 12-119 (121)
70 1x5e_A Thioredoxin domain cont 99.7 1.4E-16 4.8E-21 123.5 9.9 99 98-208 5-108 (126)
71 2es7_A Q8ZP25_salty, putative 99.7 4.5E-17 1.5E-21 131.3 6.7 99 101-208 18-123 (142)
72 2djj_A PDI, protein disulfide- 99.7 8.2E-17 2.8E-21 123.4 7.5 102 99-209 6-116 (121)
73 3ga4_A Dolichyl-diphosphooligo 99.7 9.5E-17 3.2E-21 134.6 8.3 108 100-208 18-151 (178)
74 1zma_A Bacterocin transport ac 99.7 2.3E-16 7.9E-21 121.1 9.8 97 101-206 13-117 (118)
75 3ul3_B Thioredoxin, thioredoxi 99.7 1.6E-16 5.6E-21 124.0 9.0 83 119-207 41-127 (128)
76 2dj3_A Protein disulfide-isome 99.7 6.5E-17 2.2E-21 126.2 5.5 104 98-208 5-116 (133)
77 3apq_A DNAJ homolog subfamily 99.6 5.7E-16 1.9E-20 131.2 10.6 100 100-208 97-200 (210)
78 3iv4_A Putative oxidoreductase 99.6 8.3E-16 2.8E-20 119.5 10.2 97 100-205 6-111 (112)
79 2l57_A Uncharacterized protein 99.6 1.2E-15 4E-20 118.3 10.7 88 119-212 25-119 (126)
80 3ed3_A Protein disulfide-isome 99.6 4.9E-16 1.7E-20 139.4 8.8 108 97-207 14-139 (298)
81 3f8u_A Protein disulfide-isome 99.6 1.1E-15 3.6E-20 144.2 11.1 101 101-207 2-106 (481)
82 2yj7_A LPBCA thioredoxin; oxid 99.4 3E-17 1E-21 121.8 0.0 98 102-207 3-104 (106)
83 2fwh_A Thiol:disulfide interch 99.6 5.9E-16 2E-20 122.0 7.0 100 102-208 13-126 (134)
84 1wmj_A Thioredoxin H-type; str 99.6 5.3E-17 1.8E-21 125.8 -0.2 104 98-208 12-120 (130)
85 3idv_A Protein disulfide-isome 99.6 3.1E-15 1.1E-19 127.5 10.4 100 99-208 14-120 (241)
86 3q6o_A Sulfhydryl oxidase 1; p 99.6 1.9E-15 6.5E-20 130.6 8.5 105 99-207 11-124 (244)
87 3f8u_A Protein disulfide-isome 99.6 2.5E-15 8.4E-20 141.7 9.8 133 76-216 326-467 (481)
88 1wou_A Thioredoxin -related pr 99.6 3.7E-15 1.3E-19 115.9 8.8 101 99-207 4-122 (123)
89 2r2j_A Thioredoxin domain-cont 99.6 4.1E-15 1.4E-19 137.0 9.8 100 99-207 4-114 (382)
90 3dml_A Putative uncharacterize 99.6 6.4E-15 2.2E-19 115.3 9.2 78 121-207 19-107 (116)
91 3idv_A Protein disulfide-isome 99.6 1.1E-14 3.6E-19 124.1 11.4 100 99-208 129-235 (241)
92 3uem_A Protein disulfide-isome 99.6 1.3E-14 4.3E-19 131.8 12.0 104 99-210 248-357 (361)
93 2b5e_A Protein disulfide-isome 99.6 8.2E-15 2.8E-19 139.1 11.0 104 99-211 357-468 (504)
94 2b5e_A Protein disulfide-isome 99.6 6.5E-15 2.2E-19 139.8 10.1 100 99-207 13-119 (504)
95 2djk_A PDI, protein disulfide- 99.6 3.6E-14 1.2E-18 112.0 12.6 112 97-219 3-126 (133)
96 1a8l_A Protein disulfide oxido 99.6 8.5E-15 2.9E-19 124.1 9.2 98 102-207 118-223 (226)
97 3fk8_A Disulphide isomerase; A 99.5 8E-15 2.7E-19 114.5 7.3 88 120-207 29-130 (133)
98 1fo5_A Thioredoxin; disulfide 99.5 3.9E-14 1.3E-18 101.6 9.9 77 121-207 3-83 (85)
99 3us3_A Calsequestrin-1; calciu 99.5 1.8E-14 6.1E-19 132.4 9.5 97 100-206 13-120 (367)
100 1z6n_A Hypothetical protein PA 99.5 2.7E-14 9.3E-19 118.1 9.3 80 108-188 43-129 (167)
101 2kuc_A Putative disulphide-iso 99.5 5.3E-15 1.8E-19 114.8 4.1 100 103-208 9-119 (130)
102 1sji_A Calsequestrin 2, calseq 99.5 3.9E-14 1.3E-18 128.7 9.8 97 100-207 11-119 (350)
103 3apo_A DNAJ homolog subfamily 99.5 6.6E-14 2.2E-18 139.5 11.6 98 101-207 117-218 (780)
104 1nho_A Probable thioredoxin; b 99.5 4.1E-14 1.4E-18 101.5 6.8 76 122-207 3-82 (85)
105 2lst_A Thioredoxin; structural 99.2 7.1E-15 2.4E-19 114.2 0.0 82 120-207 19-113 (130)
106 2ywm_A Glutaredoxin-like prote 99.4 2.2E-13 7.6E-18 115.9 8.8 97 100-207 118-217 (229)
107 1lu4_A Soluble secreted antige 99.4 4.2E-13 1.4E-17 103.7 9.3 82 120-208 24-134 (136)
108 1ilo_A Conserved hypothetical 99.4 1.3E-13 4.4E-18 97.5 5.6 74 123-205 2-76 (77)
109 3erw_A Sporulation thiol-disul 99.4 3.8E-13 1.3E-17 104.8 8.7 81 119-205 33-144 (145)
110 3f9u_A Putative exported cytoc 99.4 1.3E-13 4.4E-18 112.5 5.8 100 103-207 29-163 (172)
111 3t58_A Sulfhydryl oxidase 1; o 99.4 2.6E-13 8.9E-18 130.6 8.8 104 100-207 12-124 (519)
112 3qcp_A QSOX from trypanosoma b 99.4 9E-14 3.1E-18 132.1 5.1 106 100-206 23-148 (470)
113 3ph9_A Anterior gradient prote 99.4 8.2E-14 2.8E-18 113.6 4.1 70 120-189 44-120 (151)
114 1zzo_A RV1677; thioredoxin fol 99.4 8.1E-13 2.8E-17 101.7 9.0 81 120-207 25-132 (136)
115 2qc7_A ERP31, ERP28, endoplasm 99.4 5E-13 1.7E-17 116.7 8.2 97 100-209 5-118 (240)
116 2ju5_A Thioredoxin disulfide i 99.4 7E-13 2.4E-17 107.0 7.9 83 120-207 47-149 (154)
117 2c0g_A ERP29 homolog, windbeut 99.4 7.8E-13 2.7E-17 116.1 8.5 95 100-208 16-130 (248)
118 2b5x_A YKUV protein, TRXY; thi 99.4 9.5E-13 3.2E-17 102.9 8.1 96 103-207 15-142 (148)
119 1sen_A Thioredoxin-like protei 99.4 3.5E-13 1.2E-17 110.2 5.4 97 108-207 37-145 (164)
120 3apo_A DNAJ homolog subfamily 99.4 1E-12 3.4E-17 131.0 9.7 106 99-208 656-765 (780)
121 3eyt_A Uncharacterized protein 99.4 1.8E-12 6.1E-17 103.3 9.1 83 119-207 27-149 (158)
122 3eur_A Uncharacterized protein 99.4 2.7E-12 9.3E-17 100.9 9.9 79 119-206 30-141 (142)
123 3raz_A Thioredoxin-related pro 99.4 1.6E-12 5.6E-17 103.3 8.5 84 119-208 23-138 (151)
124 3kp8_A Vkorc1/thioredoxin doma 99.3 1.8E-13 6.2E-18 104.6 2.2 72 121-206 13-91 (106)
125 2f9s_A Thiol-disulfide oxidore 99.3 1.9E-12 6.3E-17 102.6 8.0 83 120-208 26-136 (151)
126 4evm_A Thioredoxin family prot 99.3 3.2E-12 1.1E-16 97.9 9.0 83 119-207 21-136 (138)
127 1a8l_A Protein disulfide oxido 99.3 1.5E-12 5.1E-17 110.2 7.6 83 108-190 10-99 (226)
128 3ia1_A THIO-disulfide isomeras 99.3 2.8E-12 9.7E-17 101.7 8.6 82 121-209 31-143 (154)
129 2hls_A Protein disulfide oxido 99.3 5.3E-12 1.8E-16 109.7 10.5 92 105-208 125-224 (243)
130 3ha9_A Uncharacterized thiored 99.3 4E-12 1.4E-16 102.3 8.9 83 119-208 36-162 (165)
131 3gl3_A Putative thiol:disulfid 99.3 3.1E-12 1.1E-16 101.1 8.0 86 119-208 27-140 (152)
132 3lor_A Thiol-disulfide isomera 99.3 6E-12 2.1E-16 100.3 9.7 82 120-207 30-152 (160)
133 2e7p_A Glutaredoxin; thioredox 99.3 4.1E-13 1.4E-17 102.5 1.6 95 108-214 10-112 (116)
134 3or5_A Thiol:disulfide interch 99.3 6.5E-12 2.2E-16 100.4 8.7 84 119-208 33-149 (165)
135 2h30_A Thioredoxin, peptide me 99.3 5.4E-12 1.9E-16 100.9 7.9 85 119-209 37-155 (164)
136 3fkf_A Thiol-disulfide oxidore 99.3 5.5E-12 1.9E-16 98.7 7.6 80 119-207 32-143 (148)
137 2lrn_A Thiol:disulfide interch 99.3 6E-12 2E-16 100.1 7.8 70 119-188 28-128 (152)
138 3kcm_A Thioredoxin family prot 99.3 6.8E-12 2.3E-16 99.3 7.7 86 119-208 27-141 (154)
139 2lja_A Putative thiol-disulfid 99.3 7.4E-12 2.5E-16 98.9 7.2 84 119-208 29-141 (152)
140 2fgx_A Putative thioredoxin; N 99.3 5.5E-12 1.9E-16 97.2 5.7 74 122-205 30-106 (107)
141 3hcz_A Possible thiol-disulfid 99.2 7.7E-12 2.6E-16 97.9 5.9 72 119-190 30-132 (148)
142 1o8x_A Tryparedoxin, TRYX, TXN 99.2 9.3E-12 3.2E-16 98.3 6.2 70 119-188 27-128 (146)
143 2l5o_A Putative thioredoxin; s 99.2 1.3E-11 4.6E-16 97.5 7.0 82 120-207 28-138 (153)
144 1kng_A Thiol:disulfide interch 99.2 1.1E-11 3.9E-16 98.1 6.5 80 120-206 42-148 (156)
145 1i5g_A Tryparedoxin II; electr 99.2 1.1E-11 3.6E-16 97.6 6.2 68 120-187 28-127 (144)
146 3hdc_A Thioredoxin family prot 99.2 2E-11 6.9E-16 97.7 7.9 72 120-191 41-137 (158)
147 2b1k_A Thiol:disulfide interch 99.2 1.1E-11 3.6E-16 100.1 6.1 80 119-206 50-156 (168)
148 3ewl_A Uncharacterized conserv 99.2 3.3E-11 1.1E-15 94.2 8.5 81 119-208 26-139 (142)
149 2lrt_A Uncharacterized protein 99.2 1.2E-11 4E-16 99.1 6.0 83 120-207 35-146 (152)
150 1o73_A Tryparedoxin; electron 99.2 1.1E-11 3.8E-16 97.2 5.5 69 119-187 27-127 (144)
151 3fw2_A Thiol-disulfide oxidore 99.2 3.1E-11 1.1E-15 95.7 6.9 69 119-187 32-134 (150)
152 4fo5_A Thioredoxin-like protei 99.2 2.7E-11 9.2E-16 95.3 6.2 80 119-207 31-142 (143)
153 3lwa_A Secreted thiol-disulfid 99.2 3.3E-11 1.1E-15 98.8 6.7 83 119-207 58-178 (183)
154 1ttz_A Conserved hypothetical 99.2 2.2E-11 7.4E-16 90.2 4.8 70 124-208 3-75 (87)
155 3s9f_A Tryparedoxin; thioredox 99.1 5E-11 1.7E-15 97.0 6.8 70 119-188 47-148 (165)
156 2lus_A Thioredoxion; CR-Trp16, 98.7 6.2E-12 2.1E-16 98.2 0.0 67 120-186 25-125 (143)
157 2hyx_A Protein DIPZ; thioredox 99.1 1.1E-10 3.6E-15 107.3 7.5 71 120-190 82-185 (352)
158 3kh7_A Thiol:disulfide interch 99.1 1.2E-10 4E-15 95.6 6.8 79 120-206 58-163 (176)
159 2ywm_A Glutaredoxin-like prote 99.1 1.2E-10 4E-15 98.9 7.0 81 108-190 9-101 (229)
160 3ira_A Conserved protein; meth 99.1 6.7E-11 2.3E-15 98.4 5.2 77 106-185 28-120 (173)
161 1jfu_A Thiol:disulfide interch 99.1 3.7E-10 1.3E-14 92.6 9.1 85 119-207 59-177 (186)
162 2cvb_A Probable thiol-disulfid 99.1 1.4E-10 4.8E-15 95.4 6.5 67 119-185 32-132 (188)
163 1hyu_A AHPF, alkyl hydroperoxi 99.1 5.2E-10 1.8E-14 107.0 11.2 91 104-206 103-196 (521)
164 3uem_A Protein disulfide-isome 99.1 7.4E-10 2.5E-14 100.3 11.7 114 97-215 114-237 (361)
165 2k6v_A Putative cytochrome C o 99.1 3E-10 1E-14 91.3 8.1 85 119-207 34-170 (172)
166 2rli_A SCO2 protein homolog, m 99.1 3E-10 1E-14 91.4 7.7 82 119-206 25-160 (171)
167 2ggt_A SCO1 protein homolog, m 99.0 6.5E-10 2.2E-14 88.7 8.3 82 120-207 23-158 (164)
168 2ywi_A Hypothetical conserved 99.0 2.7E-10 9.1E-15 94.0 6.0 86 122-207 48-171 (196)
169 2ls5_A Uncharacterized protein 98.6 3.1E-11 1.1E-15 96.4 0.0 83 119-208 32-146 (159)
170 2hls_A Protein disulfide oxido 99.0 4.9E-10 1.7E-14 97.2 6.8 79 107-190 14-103 (243)
171 1kte_A Thioltransferase; redox 99.0 9.4E-11 3.2E-15 88.0 0.6 84 124-212 14-105 (105)
172 1ego_A Glutaredoxin; electron 99.0 5.1E-10 1.8E-14 80.3 4.5 59 124-184 3-70 (85)
173 3u5r_E Uncharacterized protein 98.9 9.9E-10 3.4E-14 93.4 6.0 86 120-207 58-184 (218)
174 2k8s_A Thioredoxin; dimer, str 98.9 1.9E-10 6.5E-15 82.5 1.2 58 124-183 4-66 (80)
175 3kp9_A Vkorc1/thioredoxin doma 98.9 8.7E-10 3E-14 98.8 5.3 80 108-206 190-276 (291)
176 1xvw_A Hypothetical protein RV 98.9 2.3E-09 7.9E-14 85.5 7.0 85 122-208 38-158 (160)
177 1we0_A Alkyl hydroperoxide red 98.9 1.8E-09 6.2E-14 88.9 6.2 73 119-191 30-140 (187)
178 1wjk_A C330018D20RIK protein; 98.9 1.3E-09 4.4E-14 82.1 4.8 74 121-208 16-94 (100)
179 2vup_A Glutathione peroxidase- 98.9 5.7E-09 1.9E-13 86.4 9.1 83 119-207 47-182 (190)
180 2bmx_A Alkyl hydroperoxidase C 98.9 2.3E-09 7.8E-14 89.1 6.6 87 119-207 44-167 (195)
181 3cmi_A Peroxiredoxin HYR1; thi 98.9 2.6E-09 9E-14 86.6 6.7 70 119-189 31-153 (171)
182 2obi_A PHGPX, GPX-4, phospholi 98.9 4.6E-09 1.6E-13 86.2 7.7 41 119-159 46-88 (183)
183 2v1m_A Glutathione peroxidase; 98.8 7.4E-09 2.5E-13 82.8 8.4 41 119-159 30-72 (169)
184 2p5q_A Glutathione peroxidase 98.8 6.1E-09 2.1E-13 83.4 7.4 41 119-159 31-73 (170)
185 3dwv_A Glutathione peroxidase- 98.8 1.1E-08 3.7E-13 84.5 8.9 84 119-208 45-181 (187)
186 3drn_A Peroxiredoxin, bacterio 98.8 2.6E-09 8.8E-14 85.9 4.7 70 120-189 28-130 (161)
187 1zof_A Alkyl hydroperoxide-red 98.8 2.9E-09 9.8E-14 88.6 5.0 87 119-207 32-158 (198)
188 3kij_A Probable glutathione pe 98.8 1.8E-08 6.2E-13 82.5 9.3 41 119-159 37-79 (180)
189 2p31_A CL683, glutathione pero 98.8 1.1E-08 3.8E-13 83.9 7.9 83 119-207 48-178 (181)
190 1qmv_A Human thioredoxin perox 98.8 1E-08 3.4E-13 85.3 7.2 85 120-206 34-159 (197)
191 2h01_A 2-Cys peroxiredoxin; th 98.8 8.8E-09 3E-13 85.2 6.8 85 120-206 31-155 (192)
192 1uul_A Tryparedoxin peroxidase 98.8 1.2E-08 4E-13 85.4 7.0 85 120-206 36-161 (202)
193 1zye_A Thioredoxin-dependent p 98.7 2.2E-08 7.6E-13 85.3 8.1 86 120-207 56-182 (220)
194 2dlx_A UBX domain-containing p 98.7 1.4E-08 4.8E-13 82.6 6.0 89 120-215 42-145 (153)
195 2hze_A Glutaredoxin-1; thiored 98.7 6.4E-10 2.2E-14 85.4 -2.2 83 123-212 20-112 (114)
196 2i81_A 2-Cys peroxiredoxin; st 98.7 4E-08 1.4E-12 83.4 7.7 85 120-206 52-176 (213)
197 2f8a_A Glutathione peroxidase 98.7 2.7E-08 9.2E-13 84.2 6.5 41 119-159 46-88 (208)
198 2gs3_A PHGPX, GPX-4, phospholi 98.7 3.6E-08 1.2E-12 81.1 7.1 41 119-159 48-90 (185)
199 1xzo_A BSSCO, hypothetical pro 98.7 6E-08 2.1E-12 77.9 8.1 84 120-207 33-169 (174)
200 3gyk_A 27KDA outer membrane pr 98.7 7.9E-08 2.7E-12 78.1 8.8 40 119-158 21-60 (175)
201 1eej_A Thiol:disulfide interch 98.7 6.9E-08 2.4E-12 82.0 8.7 77 119-207 85-208 (216)
202 3ztl_A Thioredoxin peroxidase; 98.6 8.2E-08 2.8E-12 81.8 7.8 86 119-206 68-194 (222)
203 2jsy_A Probable thiol peroxida 98.6 1.1E-07 3.7E-12 76.4 7.8 70 120-189 44-147 (167)
204 1xvq_A Thiol peroxidase; thior 98.6 1.1E-07 3.7E-12 77.7 7.9 68 120-188 44-147 (175)
205 1h75_A Glutaredoxin-like prote 98.6 5.8E-08 2E-12 69.0 4.7 69 124-209 3-77 (81)
206 2cq9_A GLRX2 protein, glutared 98.5 4.4E-08 1.5E-12 77.0 4.0 94 107-215 17-120 (130)
207 2b7k_A SCO1 protein; metalloch 98.5 8.1E-08 2.8E-12 80.3 5.6 88 119-208 40-181 (200)
208 2ht9_A Glutaredoxin-2; thiored 98.5 6.5E-08 2.2E-12 77.9 3.9 91 108-213 40-140 (146)
209 1t3b_A Thiol:disulfide interch 98.5 1.1E-07 3.8E-12 80.6 4.7 78 119-208 85-209 (211)
210 4f9z_D Endoplasmic reticulum r 98.4 3.3E-06 1.1E-10 71.8 13.6 107 95-207 108-222 (227)
211 1r7h_A NRDH-redoxin; thioredox 98.4 5E-07 1.7E-11 62.7 6.5 65 124-205 3-73 (75)
212 3h93_A Thiol:disulfide interch 98.4 4.2E-07 1.4E-11 75.0 6.6 40 119-158 24-64 (192)
213 3c1r_A Glutaredoxin-1; oxidize 98.4 1.4E-07 4.6E-12 73.0 3.3 80 124-210 27-117 (118)
214 3gkn_A Bacterioferritin comigr 98.4 3.2E-07 1.1E-11 73.2 5.3 70 120-189 35-144 (163)
215 2a4v_A Peroxiredoxin DOT5; yea 98.3 3.8E-07 1.3E-11 72.8 4.7 69 121-190 36-137 (159)
216 3rhb_A ATGRXC5, glutaredoxin-C 98.3 2.5E-07 8.6E-12 70.3 3.0 91 107-211 8-109 (113)
217 2l4c_A Endoplasmic reticulum r 98.3 4E-06 1.4E-10 65.6 9.8 98 102-208 23-122 (124)
218 1nm3_A Protein HI0572; hybrid, 98.3 1.5E-06 5.2E-11 74.3 7.7 87 120-206 33-163 (241)
219 1v58_A Thiol:disulfide interch 98.3 1.5E-06 5.2E-11 75.0 7.6 80 120-207 97-230 (241)
220 2wfc_A Peroxiredoxin 5, PRDX5; 98.3 3.4E-06 1.2E-10 68.8 9.1 88 120-209 31-160 (167)
221 2c0d_A Thioredoxin peroxidase 98.2 3.3E-06 1.1E-10 72.1 8.7 86 119-206 55-180 (221)
222 2pn8_A Peroxiredoxin-4; thiore 98.2 3.6E-06 1.2E-10 71.0 8.9 85 120-206 48-173 (211)
223 1un2_A DSBA, thiol-disulfide i 98.2 4.2E-07 1.5E-11 76.5 2.6 42 120-161 113-158 (197)
224 1psq_A Probable thiol peroxida 98.2 2.6E-06 9E-11 68.3 7.1 86 120-206 42-161 (163)
225 3a2v_A Probable peroxiredoxin; 98.2 1.3E-06 4.4E-11 76.4 5.6 85 120-206 33-158 (249)
226 2yzh_A Probable thiol peroxida 98.1 8.9E-06 3E-10 65.6 8.9 86 119-206 46-168 (171)
227 4g2e_A Peroxiredoxin; redox pr 98.1 1.3E-06 4.6E-11 70.1 3.3 88 119-207 29-155 (157)
228 1n8j_A AHPC, alkyl hydroperoxi 98.1 1.1E-05 3.8E-10 66.4 8.8 85 120-206 30-152 (186)
229 2yan_A Glutaredoxin-3; oxidore 98.1 5.1E-06 1.7E-10 62.4 6.1 55 122-184 18-84 (105)
230 2khp_A Glutaredoxin; thioredox 98.1 1.2E-06 4.1E-11 63.7 2.3 78 123-211 7-91 (92)
231 1tp9_A Peroxiredoxin, PRX D (t 98.1 1.2E-05 4.2E-10 64.5 8.6 70 120-189 35-146 (162)
232 3zrd_A Thiol peroxidase; oxido 98.1 3.1E-05 1E-09 64.8 11.2 71 119-189 77-184 (200)
233 3p7x_A Probable thiol peroxida 98.0 7.1E-06 2.4E-10 65.9 6.0 85 120-206 46-164 (166)
234 3ixr_A Bacterioferritin comigr 98.0 9.4E-06 3.2E-10 66.4 6.8 70 119-188 50-159 (179)
235 2klx_A Glutaredoxin; thioredox 98.0 3E-06 1E-10 61.3 3.2 55 123-184 7-67 (89)
236 3qpm_A Peroxiredoxin; oxidored 98.0 1.8E-05 6.2E-10 68.3 8.7 86 119-206 76-202 (240)
237 3uma_A Hypothetical peroxiredo 98.0 1.3E-05 4.5E-10 66.5 7.1 85 121-207 57-183 (184)
238 3me7_A Putative uncharacterize 98.0 1.3E-05 4.6E-10 64.9 6.8 85 120-209 28-161 (170)
239 3us3_A Calsequestrin-1; calciu 98.0 0.00014 4.7E-09 66.3 14.3 119 95-214 223-354 (367)
240 1q98_A Thiol peroxidase, TPX; 97.9 2E-05 7E-10 63.2 7.3 40 120-159 43-83 (165)
241 3ic4_A Glutaredoxin (GRX-1); s 97.9 4.3E-06 1.5E-10 60.7 2.9 68 124-206 14-91 (92)
242 1fov_A Glutaredoxin 3, GRX3; a 97.9 1.5E-05 5.2E-10 56.1 5.6 54 124-184 3-63 (82)
243 4f9z_D Endoplasmic reticulum r 97.9 3.9E-05 1.3E-09 65.1 8.9 99 101-208 10-110 (227)
244 2i3y_A Epididymal secretory gl 97.9 4E-05 1.4E-09 65.2 8.6 39 119-158 55-95 (215)
245 2r37_A Glutathione peroxidase 97.9 4.8E-05 1.6E-09 64.2 8.5 39 119-158 37-77 (207)
246 3hd5_A Thiol:disulfide interch 97.9 1.9E-05 6.6E-10 65.0 5.9 42 119-160 24-66 (195)
247 3nzn_A Glutaredoxin; structura 97.8 5.5E-05 1.9E-09 56.4 7.5 66 123-205 23-101 (103)
248 2lqo_A Putative glutaredoxin R 97.8 5.9E-05 2E-09 55.9 7.2 75 123-213 5-87 (92)
249 3mng_A Peroxiredoxin-5, mitoch 97.8 6.1E-05 2.1E-09 61.8 7.7 86 120-207 43-172 (173)
250 3h8q_A Thioredoxin reductase 3 97.7 3E-05 1E-09 59.1 5.0 65 108-184 8-82 (114)
251 3hz8_A Thiol:disulfide interch 97.7 3.5E-05 1.2E-09 63.9 5.6 42 119-160 23-65 (193)
252 4gqc_A Thiol peroxidase, perox 97.7 6.5E-06 2.2E-10 66.7 0.8 72 119-190 32-141 (164)
253 3qmx_A Glutaredoxin A, glutare 97.7 5.7E-05 1.9E-09 56.4 5.8 56 122-184 16-79 (99)
254 3tjj_A Peroxiredoxin-4; thiore 97.7 7.5E-05 2.6E-09 65.1 7.5 85 119-205 90-215 (254)
255 3ctg_A Glutaredoxin-2; reduced 97.6 1E-05 3.5E-10 63.5 1.0 57 124-184 39-106 (129)
256 1sji_A Calsequestrin 2, calseq 97.6 0.00045 1.5E-08 62.1 11.9 108 97-207 223-343 (350)
257 4hde_A SCO1/SENC family lipopr 97.6 0.00027 9.1E-09 57.3 8.7 40 119-158 31-75 (170)
258 4dvc_A Thiol:disulfide interch 97.6 0.00033 1.1E-08 56.3 9.1 38 120-157 21-59 (184)
259 3l9v_A Putative thiol-disulfid 97.6 3.8E-05 1.3E-09 63.5 3.3 41 121-161 15-59 (189)
260 3gv1_A Disulfide interchange p 97.5 0.00016 5.5E-09 57.9 6.6 75 120-208 14-137 (147)
261 2v2g_A Peroxiredoxin 6; oxidor 97.5 0.00018 6E-09 61.9 7.2 84 121-206 30-161 (233)
262 2pwj_A Mitochondrial peroxired 97.5 0.00022 7.6E-09 57.9 7.3 39 121-159 45-87 (171)
263 3msz_A Glutaredoxin 1; alpha-b 97.5 9.7E-05 3.3E-09 52.5 4.2 57 123-184 5-73 (89)
264 1wik_A Thioredoxin-like protei 97.4 0.00018 6.3E-09 54.1 5.2 64 109-184 7-82 (109)
265 2h8l_A Protein disulfide-isome 97.4 0.00027 9.3E-09 60.7 6.5 100 101-208 7-111 (252)
266 1prx_A HORF6; peroxiredoxin, h 97.3 0.00089 3E-08 56.9 9.0 82 122-205 33-164 (224)
267 2wci_A Glutaredoxin-4; redox-a 97.3 7.3E-05 2.5E-09 59.3 2.0 83 122-214 36-129 (135)
268 3feu_A Putative lipoprotein; a 97.3 7.9E-05 2.7E-09 61.5 2.3 39 121-160 23-61 (185)
269 3ec3_A Protein disulfide-isome 97.3 0.00026 8.9E-09 60.9 5.1 101 101-208 7-113 (250)
270 3keb_A Probable thiol peroxida 97.2 0.0007 2.4E-08 58.1 7.5 83 120-206 48-172 (224)
271 2ec4_A FAS-associated factor 1 97.2 0.0017 5.7E-08 53.7 9.0 94 106-207 36-165 (178)
272 2r2j_A Thioredoxin domain-cont 97.1 0.0028 9.4E-08 57.7 10.3 117 98-221 217-342 (382)
273 3gx8_A Monothiol glutaredoxin- 97.1 0.00016 5.4E-09 56.0 1.6 86 122-214 17-113 (121)
274 3l4n_A Monothiol glutaredoxin- 97.1 0.00023 8E-09 55.7 2.6 97 108-214 5-109 (127)
275 3bj5_A Protein disulfide-isome 97.1 0.0049 1.7E-07 49.0 10.4 120 94-220 8-139 (147)
276 1xcc_A 1-Cys peroxiredoxin; un 97.0 0.001 3.5E-08 56.4 6.1 83 122-206 33-162 (220)
277 2znm_A Thiol:disulfide interch 96.9 0.00087 3E-08 54.7 4.8 41 119-159 21-62 (195)
278 2wem_A Glutaredoxin-related pr 96.7 0.0012 4.1E-08 50.9 4.0 83 122-214 21-115 (118)
279 2rem_A Disulfide oxidoreductas 96.7 0.0024 8.2E-08 51.9 5.7 41 119-159 24-65 (193)
280 3l9s_A Thiol:disulfide interch 96.7 0.0013 4.5E-08 54.4 4.0 40 121-160 22-65 (191)
281 3ipz_A Monothiol glutaredoxin- 96.5 0.001 3.4E-08 50.2 2.3 66 109-184 9-85 (109)
282 1z6m_A Conserved hypothetical 96.5 0.0034 1.2E-07 50.3 5.6 40 120-159 27-69 (175)
283 3ed3_A Protein disulfide-isome 96.2 0.17 5.8E-06 44.4 15.3 102 101-214 144-272 (298)
284 4f82_A Thioredoxin reductase; 96.1 0.019 6.5E-07 47.3 7.9 97 101-207 35-173 (176)
285 1nm3_A Protein HI0572; hybrid, 96.0 0.02 6.9E-07 48.3 8.2 70 108-184 156-231 (241)
286 3ec3_A Protein disulfide-isome 95.6 0.14 4.9E-06 43.5 11.9 116 95-219 111-239 (250)
287 3zyw_A Glutaredoxin-3; metal b 95.6 0.016 5.6E-07 43.7 5.1 65 109-184 7-83 (111)
288 2h8l_A Protein disulfide-isome 95.6 0.047 1.6E-06 46.5 8.6 111 97-219 111-241 (252)
289 3c7m_A Thiol:disulfide interch 95.4 0.018 6.2E-07 46.5 5.2 39 121-159 18-58 (195)
290 1aba_A Glutaredoxin; electron 95.1 0.024 8.2E-07 40.3 4.4 54 124-183 2-76 (87)
291 1t1v_A SH3BGRL3, SH3 domain-bi 95.0 0.042 1.4E-06 39.6 5.6 54 124-184 4-72 (93)
292 2ct6_A SH3 domain-binding glut 95.0 0.063 2.1E-06 40.3 6.6 55 123-184 9-84 (111)
293 2jad_A Yellow fluorescent prot 94.7 0.0045 1.5E-07 56.7 -0.7 84 124-212 263-355 (362)
294 2axo_A Hypothetical protein AT 94.6 0.081 2.8E-06 46.5 7.2 74 122-207 44-140 (270)
295 2wul_A Glutaredoxin related pr 94.4 0.059 2E-06 41.5 5.2 94 107-213 10-114 (118)
296 3sbc_A Peroxiredoxin TSA1; alp 94.0 0.039 1.3E-06 46.9 3.8 51 101-159 41-94 (216)
297 4eo3_A Bacterioferritin comigr 93.7 0.1 3.4E-06 46.7 6.2 70 119-190 23-122 (322)
298 3bci_A Disulfide bond protein 93.0 0.17 5.7E-06 40.7 5.9 40 120-159 11-54 (186)
299 3gha_A Disulfide bond formatio 92.8 0.17 5.9E-06 41.8 5.8 40 120-159 29-72 (202)
300 3tue_A Tryparedoxin peroxidase 92.2 0.084 2.9E-06 44.9 3.2 50 102-159 46-98 (219)
301 3q6o_A Sulfhydryl oxidase 1; p 91.7 0.41 1.4E-05 40.0 7.0 94 103-207 141-237 (244)
302 3f4s_A Alpha-DSBA1, putative u 90.5 0.31 1.1E-05 41.2 5.1 38 121-158 40-81 (226)
303 3gn3_A Putative protein-disulf 90.2 0.21 7.2E-06 40.7 3.6 38 121-158 15-54 (182)
304 2x8g_A Thioredoxin glutathione 89.9 0.61 2.1E-05 44.5 7.2 55 124-185 20-84 (598)
305 1yyb_A Programmed cell death p 89.4 0.28 9.4E-06 27.9 2.6 18 76-93 4-21 (27)
306 2in3_A Hypothetical protein; D 89.0 0.56 1.9E-05 38.3 5.4 39 163-207 169-207 (216)
307 3tdg_A DSBG, putative uncharac 89.0 0.3 1E-05 42.8 3.9 29 120-148 147-175 (273)
308 1u6t_A SH3 domain-binding glut 87.9 1 3.5E-05 34.6 5.8 60 123-185 1-77 (121)
309 1xiy_A Peroxiredoxin, pfaop; a 86.7 0.71 2.4E-05 37.7 4.6 39 120-158 43-87 (182)
310 3gmf_A Protein-disulfide isome 86.2 1.1 3.8E-05 37.1 5.6 39 120-158 15-57 (205)
311 3t58_A Sulfhydryl oxidase 1; o 80.4 1.1 3.8E-05 42.6 3.6 93 102-207 140-237 (519)
312 2xhf_A Peroxiredoxin 5; oxidor 80.3 1.3 4.4E-05 35.9 3.5 38 120-157 42-83 (171)
313 3kzq_A Putative uncharacterize 77.5 3.2 0.00011 33.7 5.2 37 123-159 4-41 (208)
314 2g2q_A Glutaredoxin-2; thiored 74.7 1.2 4E-05 34.2 1.5 36 121-159 2-37 (124)
315 3kzq_A Putative uncharacterize 73.2 5.1 0.00018 32.4 5.3 28 164-191 163-190 (208)
316 2a2p_A Selenoprotein M, SELM p 71.8 8.4 0.00029 29.9 5.8 70 132-216 22-97 (129)
317 1z3e_A Regulatory protein SPX; 68.5 6.4 0.00022 29.9 4.6 32 124-160 3-34 (132)
318 1hyu_A AHPF, alkyl hydroperoxi 66.1 13 0.00045 34.7 7.1 54 121-181 19-72 (521)
319 1rw1_A Conserved hypothetical 64.8 4.3 0.00015 30.1 2.9 31 124-159 2-32 (114)
320 2kok_A Arsenate reductase; bru 60.6 5.6 0.00019 29.7 2.9 31 124-159 7-37 (120)
321 3fz5_A Possible 2-hydroxychrom 57.4 12 0.00042 30.1 4.6 35 164-209 167-201 (202)
322 1z6m_A Conserved hypothetical 57.2 8.1 0.00028 30.0 3.4 33 163-206 142-174 (175)
323 2in3_A Hypothetical protein; D 57.1 14 0.00049 29.5 5.0 36 122-157 8-44 (216)
324 3l78_A Regulatory protein SPX; 56.6 7.3 0.00025 29.2 2.9 32 124-160 2-33 (120)
325 3bci_A Disulfide bond protein 55.7 11 0.00038 29.6 4.0 35 163-208 142-176 (186)
326 3gha_A Disulfide bond formatio 54.9 13 0.00043 30.2 4.3 34 163-207 156-189 (202)
327 3gn3_A Putative protein-disulf 54.3 5.8 0.0002 31.9 2.1 35 163-205 147-181 (182)
328 2imf_A HCCA isomerase, 2-hydro 53.0 12 0.00042 29.9 3.9 27 124-150 3-29 (203)
329 2imf_A HCCA isomerase, 2-hydro 52.6 10 0.00034 30.5 3.3 33 164-207 161-193 (203)
330 3fz4_A Putative arsenate reduc 47.8 12 0.00042 28.0 2.9 33 123-160 4-36 (120)
331 2jxn_A Uncharacterized protein 46.4 5.8 0.0002 30.7 0.8 17 77-93 3-19 (127)
332 3gmf_A Protein-disulfide isome 44.1 17 0.00059 29.7 3.5 33 164-207 162-194 (205)
333 3gkx_A Putative ARSC family re 43.6 13 0.00043 28.0 2.3 31 124-159 6-36 (120)
334 3feu_A Putative lipoprotein; a 43.2 15 0.00051 29.3 2.9 36 163-206 145-180 (185)
335 4g9p_A 4-hydroxy-3-methylbut-2 42.5 24 0.00081 32.5 4.4 19 170-188 365-383 (406)
336 3fhk_A UPF0403 protein YPHP; d 40.4 1.3E+02 0.0045 23.5 12.7 101 79-187 8-123 (147)
337 1r4w_A Glutathione S-transfera 38.1 26 0.0009 28.5 3.7 29 122-150 6-34 (226)
338 1s3c_A Arsenate reductase; ARS 37.8 15 0.00051 28.4 2.0 32 124-160 4-35 (141)
339 1s3a_A NADH-ubiquinone oxidore 37.7 1.1E+02 0.0038 22.0 9.8 71 123-207 21-96 (102)
340 3rdw_A Putative arsenate reduc 36.2 14 0.00046 27.8 1.5 31 124-159 7-37 (121)
341 3f0i_A Arsenate reductase; str 33.9 19 0.00066 26.9 2.0 21 124-144 6-26 (119)
342 3f4s_A Alpha-DSBA1, putative u 32.7 34 0.0012 28.3 3.6 41 164-207 164-208 (226)
343 2hvu_A PDCD5-like protein; YMR 29.7 9.2 0.00032 29.1 -0.5 17 78-94 4-20 (116)
344 2lnh_A N-WAsp, neural wiskott- 26.9 23 0.00079 24.0 1.2 16 13-28 22-37 (65)
345 1cee_B Wiskott-aldrich syndrom 23.3 34 0.0011 22.5 1.5 16 13-28 33-48 (59)
346 3tfg_A ALR2278 protein; heme-b 22.2 1.9E+02 0.0063 23.1 6.1 31 121-151 128-158 (189)
347 2v0f_A Chromodomain-helicase-D 21.3 31 0.0011 24.8 1.0 18 15-32 54-71 (87)
348 3kgk_A Arsenical resistance op 21.2 2.6E+02 0.0088 20.7 6.7 58 138-206 29-99 (110)
349 2r4v_A XAP121, chloride intrac 20.5 1.5E+02 0.005 24.0 5.3 51 128-183 26-80 (247)
350 3ktb_A Arsenical resistance op 20.2 2.6E+02 0.0091 20.5 7.4 59 137-206 31-102 (106)
No 1
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=100.00 E-value=1.5e-35 Score=260.75 Aligned_cols=161 Identities=25% Similarity=0.449 Sum_probs=144.8
Q ss_pred ccccccccCHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHh-hhcCCCceEEc-ChhhHHHHHHcCCCCceEEEEEEc
Q 025454 52 DKSWVDEKTEEELEELEDDPDLDDDRFLEEYRKKRLAEMREAT-KISRFGSVMPI-SGSDFVREVSQAPPDVWVVVILYK 129 (252)
Q Consensus 52 ~~~~~~~~~~~el~~led~~~~~Dd~~l~~yR~kRl~el~~~~-~~~~fG~v~eI-s~~~f~~~V~~~~~~~~VVV~fya 129 (252)
+.+.++.++++||++|++| ++|++||++||++||++|++.+ .+..||.|++| +..+|...|.+++++++|||+||+
T Consensus 65 ~~~~~~~~~~~e~~~~~~d--~eDe~fL~~~r~~Rl~el~~~~~~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya 142 (245)
T 1a0r_P 65 KERFSRKMSVQEYELIHKD--KEDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYE 142 (245)
T ss_dssp ---CCCCSCHHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHCCCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEEC
T ss_pred chhhhccCChhhhhhcccc--cccHHHHHHHHHHHHHHHHHHhhccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEEC
Confidence 3456778899999999865 5889999999999999999866 45689999999 799999999876567899999999
Q ss_pred CCCchhhhHHHHHHHHHHHCCCceEEEEeccC--CCCCCCCCcccEEEEEECCeEEEEeeccccc-CCCCCHHHHHHHHH
Q 025454 130 DGFAECGLLMQCLEELARKYPATKFVKIISTD--CIPNYPDRNLPTVLVYNNGAVKANYVGLRSF-GRRCTPEGVALVLC 206 (252)
Q Consensus 130 ~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~--~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~-G~~~~~e~lE~~L~ 206 (252)
+||++|+.|.|+|.+||.+|+.++|++|+++. ++.+|+|.++|||++|++|+.+.+++|+..+ |..++.++|+++|.
T Consensus 143 ~wC~~Ck~l~p~l~~La~~~~~v~f~kVd~d~~~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~ 222 (245)
T 1a0r_P 143 DGIKGCDALNSSLICLAAEYPMVKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLN 222 (245)
T ss_dssp TTSTTHHHHHHHHHHHHHHCTTSEEEEEEHHHHCCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHCCCCEEEEEeCCcHHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHH
Confidence 99999999999999999999999999999875 7789999999999999999999999999887 77899999999999
Q ss_pred hcCCCCCC
Q 025454 207 QSDPVLND 214 (252)
Q Consensus 207 ~~g~i~~~ 214 (252)
++|+|+..
T Consensus 223 ~~g~l~~~ 230 (245)
T 1a0r_P 223 EYGLLPEK 230 (245)
T ss_dssp TTTCSCCC
T ss_pred HcCCCCCc
Confidence 99998654
No 2
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=100.00 E-value=1.3e-34 Score=250.16 Aligned_cols=158 Identities=25% Similarity=0.445 Sum_probs=144.8
Q ss_pred cccccccCHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHh-hhcCCCceEEc-ChhhHHHHHHcCCCCceEEEEEEcC
Q 025454 53 KSWVDEKTEEELEELEDDPDLDDDRFLEEYRKKRLAEMREAT-KISRFGSVMPI-SGSDFVREVSQAPPDVWVVVILYKD 130 (252)
Q Consensus 53 ~~~~~~~~~~el~~led~~~~~Dd~~l~~yR~kRl~el~~~~-~~~~fG~v~eI-s~~~f~~~V~~~~~~~~VVV~fya~ 130 (252)
.+.++.++++||+++++| ++|++||++||++||++|++.. ....||.|++| +..+|...|.+++++++|||+||++
T Consensus 53 ~~~~~~~~~~e~~~~~~d--~~d~~fl~~~r~~Rl~el~~~~~~~~~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~ 130 (217)
T 2trc_P 53 ERMSRKMSIQEYELIHQD--KEDEGCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYED 130 (217)
T ss_dssp SCCCCSSCHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHCCCCCCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECT
T ss_pred hhhhccCChhhhhhhccc--cccHHHHHHHHHHHHHHHHHHHHhccCCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECC
Confidence 456778999999999865 4889999999999999998765 45789999999 8999999998876678999999999
Q ss_pred CCchhhhHHHHHHHHHHHCCCceEEEEecc--CCCCCCCCCcccEEEEEECCeEEEEeeccccc-CCCCCHHHHHHHHHh
Q 025454 131 GFAECGLLMQCLEELARKYPATKFVKIIST--DCIPNYPDRNLPTVLVYNNGAVKANYVGLRSF-GRRCTPEGVALVLCQ 207 (252)
Q Consensus 131 wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~--~~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~-G~~~~~e~lE~~L~~ 207 (252)
||++|+.|.|+|..||.+|+.++|++|+++ .++.+|+|.++|||++|++|+.+.+++|+... |..++.++|+++|.+
T Consensus 131 wC~~C~~l~p~l~~la~~~~~v~f~~vd~~~~~l~~~~~i~~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 131 GVRGCDALNSSLECLAAEYPMVKFCKIRASNTGAGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp TSTTHHHHHHHHHHHHTTCTTSEEEEEEHHHHTCSTTSCGGGCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred CCccHHHHHHHHHHHHHHCCCeEEEEEECCcHHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 999999999999999999999999999986 46789999999999999999999999999987 889999999999999
Q ss_pred cCCCC
Q 025454 208 SDPVL 212 (252)
Q Consensus 208 ~g~i~ 212 (252)
+|+|+
T Consensus 211 ~g~l~ 215 (217)
T 2trc_P 211 YGLLP 215 (217)
T ss_dssp TTCSC
T ss_pred cCCCC
Confidence 99875
No 3
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-32 Score=216.06 Aligned_cols=117 Identities=40% Similarity=0.748 Sum_probs=111.8
Q ss_pred CCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCCCCCCCCCcccEEEEE
Q 025454 98 RFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVY 177 (252)
Q Consensus 98 ~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~~~~~~i~~lPTlliy 177 (252)
+||.|++|+.++|.+.|.+++++++|||+|||+||++|+.|.|+|++||++||+++|++||+++++.+|+|+++|||++|
T Consensus 1 ~~G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~~~~~~v~~~PT~~~f 80 (118)
T 3evi_A 1 KFGELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSCIQHYHDNCLPTIFVY 80 (118)
T ss_dssp CCCSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGTSTTCCGGGCSEEEEE
T ss_pred CCcceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEEEEEhHHhHHHCCCCCCCEEEEE
Confidence 69999999999999999887766799999999999999999999999999999999999999999999999999999999
Q ss_pred ECCeEEEEeeccccc-CCCCCHHHHHHHHHhcCCCCCC
Q 025454 178 NNGAVKANYVGLRSF-GRRCTPEGVALVLCQSDPVLND 214 (252)
Q Consensus 178 ~~G~~v~~~vG~~~~-G~~~~~e~lE~~L~~~g~i~~~ 214 (252)
++|+.+.+++|+.++ |.+++.++||++|.++|+|.++
T Consensus 81 k~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~g~i~~~ 118 (118)
T 3evi_A 81 KNGQIEAKFIGIIECGGINLKLEELEWKLAEVGAIQTD 118 (118)
T ss_dssp ETTEEEEEEESTTTTTCSSCCHHHHHHHHHTTTSCCCC
T ss_pred ECCEEEEEEeChhhhCCCCCCHHHHHHHHHHcCCcCCC
Confidence 999999999999999 7899999999999999999764
No 4
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.94 E-value=1.5e-26 Score=184.31 Aligned_cols=124 Identities=36% Similarity=0.678 Sum_probs=115.1
Q ss_pred hhhcCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCCCCCCCCCcccE
Q 025454 94 TKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPT 173 (252)
Q Consensus 94 ~~~~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~~~~~~i~~lPT 173 (252)
+.+++||.|++|+.++|.+.|.+++++++|||+||++||++|+.|.|.|.+|+.+|+.++|++|+++....+|+|.++||
T Consensus 4 ~~~~~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~~~~~i~~~Pt 83 (135)
T 2dbc_A 4 GSSGKFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETKFVKAIVNSCIEHYHDNCLPT 83 (135)
T ss_dssp CCCCCCCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSSEEEEEECCSSSCSSCCSSCCSE
T ss_pred cccCCCCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCcccCCCCCCCE
Confidence 35678999999999999999988766789999999999999999999999999999999999999998889999999999
Q ss_pred EEEEECCeEEEEeeccccc-CCCCCHHHHHHHHHhcCCCCCCCCC
Q 025454 174 VLVYNNGAVKANYVGLRSF-GRRCTPEGVALVLCQSDPVLNDGQS 217 (252)
Q Consensus 174 lliy~~G~~v~~~vG~~~~-G~~~~~e~lE~~L~~~g~i~~~~~~ 217 (252)
+++|++|+.+.+++|+..+ |.+++.++|+.+|.++|++..+...
T Consensus 84 ~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~~i~~~~~~ 128 (135)
T 2dbc_A 84 IFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVGAIQSDLEE 128 (135)
T ss_dssp EEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHTSSCCCSCC
T ss_pred EEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcCCccccccC
Confidence 9999999999999999888 5688999999999999999877554
No 5
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.89 E-value=1.4e-22 Score=155.48 Aligned_cols=99 Identities=21% Similarity=0.381 Sum_probs=88.3
Q ss_pred eEEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC---CCCCCCCcccEEEEE
Q 025454 102 VMPI-SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC---IPNYPDRNLPTVLVY 177 (252)
Q Consensus 102 v~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~---~~~~~i~~lPTlliy 177 (252)
|.+| +.++|.+.+.++ ++++|||+|||+||++|+.|.|.|.+++..|+++.|++||.++. +..|+|+++||+++|
T Consensus 2 V~~i~~~~~f~~~l~~~-~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~ 80 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEA-GNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQIACMPTFLFM 80 (105)
T ss_dssp CEECCSHHHHHHHHHHT-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCBSSEEEEE
T ss_pred eEEeCCHHHHHHHHHhc-CCCEEEEEEECCCCCCccCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCCCeecEEEEE
Confidence 5677 568999999876 35799999999999999999999999999999999999998754 589999999999999
Q ss_pred ECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 178 NNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 178 ~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
++|+.+.+++|. +.+.|..+|.++
T Consensus 81 ~~G~~v~~~~G~-------~~~~l~~~i~k~ 104 (105)
T 3zzx_A 81 KNGQKLDSLSGA-------NYDKLLELVEKN 104 (105)
T ss_dssp ETTEEEEEEESC-------CHHHHHHHHHHH
T ss_pred ECCEEEEEEeCc-------CHHHHHHHHHhc
Confidence 999999999984 468898888765
No 6
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.84 E-value=1.1e-20 Score=155.16 Aligned_cols=100 Identities=10% Similarity=0.038 Sum_probs=83.0
Q ss_pred eEEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCCCCCCcccEEEE
Q 025454 102 VMPI-SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIPNYPDRNLPTVLV 176 (252)
Q Consensus 102 v~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~~~i~~lPTlli 176 (252)
|..| +..+|.++|.+. .+++|||.|||+||++|+.|.|.|++||++|++ ++|++||.++ ++..|+|+++|||++
T Consensus 23 v~~l~t~~~f~~~v~~~-~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~f 101 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNE-DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMF 101 (160)
T ss_dssp CEECCSHHHHHHHHHHC-SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEE
T ss_pred hhccCCHHHHHHHHHhc-CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEE
Confidence 5677 679999999753 237999999999999999999999999999986 9999999975 468999999999999
Q ss_pred EECCeEE--E-------EeecccccCCCCCHHHHHHHHHh
Q 025454 177 YNNGAVK--A-------NYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 177 y~~G~~v--~-------~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|++|+.+ + +++|... +.++|..+|..
T Consensus 102 Fk~G~~v~vd~Gtgd~~k~vGa~~-----~k~~l~~~ie~ 136 (160)
T 2av4_A 102 FYRNKHMMIDLGTGNNNKINWPMN-----NKQEFIDIVET 136 (160)
T ss_dssp EETTEEEEEECSSSCCSCBCSCCC-----CHHHHHHHHHH
T ss_pred EECCEEEEEecCCCCcCeEEeecC-----CHHHHHHHHHH
Confidence 9999998 5 7777531 25566665543
No 7
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.84 E-value=8.2e-21 Score=150.60 Aligned_cols=122 Identities=23% Similarity=0.306 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHhh-hcCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceE
Q 025454 77 RFLEEYRKKRLAEMREATK-ISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKF 154 (252)
Q Consensus 77 ~~l~~yR~kRl~el~~~~~-~~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkF 154 (252)
.-+...|++|+++++...+ +..+|.|.+++.++|...+.+.+ + |||+||++||++|+.+.|.|.+++.+|+ .++|
T Consensus 9 ~~~~~~~~~r~~~~~~~~~c~~~~~~v~~l~~~~~~~~~~~~~--~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~ 85 (140)
T 1v98_A 9 GAKNRLGTPPPGQVPVCGACKTPLPWVVEADEKGFAQEVAGAP--L-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKV 85 (140)
T ss_dssp ----------------------------------------CCC--E-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEE
T ss_pred cccccCCcccccCCcccccccCCCCccccCCHHHHHHHHHcCC--C-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEE
Confidence 3578899999999987665 56789999999999999998654 4 9999999999999999999999999998 5999
Q ss_pred EEEeccCC---CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 155 VKIISTDC---IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 155 vkI~~~~~---~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
++|+.+.. ..+|+|.++||+++|++|+.+.++.|.. +.+.|..+|.+
T Consensus 86 ~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~------~~~~l~~~i~~ 135 (140)
T 1v98_A 86 VKVNVDEHPGLAARYGVRSVPTLVLFRRGAPVATWVGAS------PRRVLEERLRP 135 (140)
T ss_dssp EEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCC------CHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHCCCCccCEEEEEeCCcEEEEEeCCC------CHHHHHHHHHH
Confidence 99998754 4689999999999999999999999863 46778888765
No 8
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.84 E-value=8.3e-21 Score=152.88 Aligned_cols=102 Identities=11% Similarity=0.095 Sum_probs=86.6
Q ss_pred CCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCC--chhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCCCCCCcc
Q 025454 98 RFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGF--AECGLLMQCLEELARKYPA-TKFVKIISTD---CIPNYPDRNL 171 (252)
Q Consensus 98 ~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc--~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~~~i~~l 171 (252)
++|- ..|+.++|.+.|.+++ .+|||.|||+|| ++|+.|.|+|++|+++|.+ ++|+|||.++ ++.+|+|+++
T Consensus 14 ~~g~-~~vt~~~F~~~v~~~~--~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~si 90 (137)
T 2qsi_A 14 PNAP-TLVDEATVDDFIAHSG--KIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVC 90 (137)
T ss_dssp ---C-EEECTTTHHHHHHTSS--SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSS
T ss_pred hcCC-cccCHhHHHHHHhcCC--CcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccC
Confidence 3554 4889999999997653 589999999999 9999999999999999964 9999999875 4689999999
Q ss_pred cEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 172 PTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 172 PTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|||++|+||+.+++++|+. +.+.|..+|.++
T Consensus 91 PTlilFkdG~~v~~~vG~~------~k~~l~~~l~~~ 121 (137)
T 2qsi_A 91 PSLAVVQPERTLGVIAKIQ------DWSSYLAQIGAM 121 (137)
T ss_dssp SEEEEEECCEEEEEEESCC------CHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeCCC------CHHHHHHHHHHH
Confidence 9999999999999999985 356777777653
No 9
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.82 E-value=2.3e-20 Score=150.78 Aligned_cols=98 Identities=16% Similarity=0.138 Sum_probs=86.2
Q ss_pred eEEcChhhHHHHHHcCCCCceEEEEEEcCC--CchhhhHHHHHHHHHHHCCC--ceEEEEeccC---CCCCCCCCcccEE
Q 025454 102 VMPISGSDFVREVSQAPPDVWVVVILYKDG--FAECGLLMQCLEELARKYPA--TKFVKIISTD---CIPNYPDRNLPTV 174 (252)
Q Consensus 102 v~eIs~~~f~~~V~~~~~~~~VVV~fya~w--c~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~---~~~~~~i~~lPTl 174 (252)
+..++.++|.+.|. ++ .+|||.||++| |++|+.|.|+|++||++|++ ++|+|||.++ ++.+|+|+++|||
T Consensus 19 ~~~~t~~~F~~~v~-~~--~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTl 95 (140)
T 2qgv_A 19 WTPVSESRLDDWLT-QA--PDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPAT 95 (140)
T ss_dssp CEECCHHHHHHHHH-TC--SSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEE
T ss_pred CccCCHHHHHHHHh-CC--CCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEE
Confidence 56899999999996 32 48999999999 99999999999999999974 8999999874 5689999999999
Q ss_pred EEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 175 LVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 175 liy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
++|++|+.+++++|+. +.+.|..+|.+.
T Consensus 96 ilFk~G~~v~~~~G~~------~k~~l~~~i~~~ 123 (140)
T 2qgv_A 96 LVFTGGNYRGVLNGIH------PWAELINLMRGL 123 (140)
T ss_dssp EEEETTEEEEEEESCC------CHHHHHHHHHHH
T ss_pred EEEECCEEEEEEecCC------CHHHHHHHHHHH
Confidence 9999999999999975 457788877764
No 10
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.79 E-value=1.1e-18 Score=131.58 Aligned_cols=99 Identities=24% Similarity=0.380 Sum_probs=85.0
Q ss_pred ceEEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC---CCCCCCCcccEEEE
Q 025454 101 SVMPI-SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC---IPNYPDRNLPTVLV 176 (252)
Q Consensus 101 ~v~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~---~~~~~i~~lPTlli 176 (252)
.|.+| +.++|.+.+.+. ++++|||+||++||++|+.+.|.|.+++++|+++.|++|+.+.. ...|+|.++||+++
T Consensus 2 ~v~~i~~~~~~~~~~~~~-~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 80 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELSGA-GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFQF 80 (107)
T ss_dssp CEEEECSGGGHHHHHHHT-TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred ceEEecCHHHHHHHHHhC-CCCEEEEEEECCCChhhHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCCCcccEEEE
Confidence 46777 678999988652 34799999999999999999999999999999999999998753 47899999999999
Q ss_pred EECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 177 YNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 177 y~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|++|+.+.++.|.. .++|..+|.+
T Consensus 81 ~~~G~~~~~~~G~~-------~~~l~~~l~~ 104 (107)
T 1gh2_A 81 FRNKVRIDQYQGAD-------AVGLEEKIKQ 104 (107)
T ss_dssp EETTEEEEEEESSC-------HHHHHHHHHH
T ss_pred EECCeEEEEEeCCC-------HHHHHHHHHH
Confidence 99999999998853 3458887765
No 11
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.79 E-value=1.4e-18 Score=130.98 Aligned_cols=100 Identities=16% Similarity=0.290 Sum_probs=88.6
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccCC---CCCCCCCcccEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTDC---IPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~~---~~~~~i~~lPTll 175 (252)
..|..++.++|...+.+.+ ++|||+||++||++|+.+.|.|.+++++|++ +.|++|+.+.. ..+|+|.++||++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~--~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 81 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEG--KACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQIL 81 (111)
T ss_dssp CCSEECCHHHHHHHHTTSC--CCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEE
T ss_pred CcceecCHHHHHHHHHhcC--CEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEE
Confidence 4688999999999995443 6899999999999999999999999999996 99999998753 5889999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+|++|+.+.++.|. .+.+.|..+|.+
T Consensus 82 ~~~~g~~~~~~~g~------~~~~~l~~~l~~ 107 (111)
T 3gnj_A 82 YFKDGEYKGKMAGD------VEDDEVEQMIAD 107 (111)
T ss_dssp EEETTEEEEEEESS------CCHHHHHHHHHH
T ss_pred EEECCEEEEEEecc------CCHHHHHHHHHH
Confidence 99999999999886 357888888765
No 12
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.79 E-value=3.9e-19 Score=134.91 Aligned_cols=102 Identities=19% Similarity=0.212 Sum_probs=89.2
Q ss_pred CCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc-C---CCCCCCCCcccE
Q 025454 98 RFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST-D---CIPNYPDRNLPT 173 (252)
Q Consensus 98 ~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~-~---~~~~~~i~~lPT 173 (252)
..|.|..++.++|.+.+.+. ++++|||+||++||++|+.+.|.|.+++.+|+++.|+.|+.+ . +...|++.++||
T Consensus 3 ~~~~v~~l~~~~~~~~~~~~-~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v~~~Pt 81 (111)
T 2pu9_C 3 IVGKVTEVNKDTFWPIVKAA-GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPT 81 (111)
T ss_dssp CTTSEEEECTTTHHHHHTTC-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSBSSE
T ss_pred CcCccEEechHHHHHHHHhc-CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCCCeeeE
Confidence 35789999999999999753 357999999999999999999999999999999999999986 2 347899999999
Q ss_pred EEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 174 VLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 174 lliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+++|++|+.+.++.|. ..+.|..+|.+
T Consensus 82 ~~~~~~G~~~~~~~G~-------~~~~l~~~l~~ 108 (111)
T 2pu9_C 82 FKILKENSVVGEVTGA-------KYDKLLEAIQA 108 (111)
T ss_dssp EEEESSSSEEEEEESS-------CHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCC-------CHHHHHHHHHH
Confidence 9999999999998875 26778888765
No 13
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.79 E-value=2.3e-19 Score=135.26 Aligned_cols=97 Identities=13% Similarity=0.214 Sum_probs=73.8
Q ss_pred EEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEEEEEE
Q 025454 103 MPI-SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTVLVYN 178 (252)
Q Consensus 103 ~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTlliy~ 178 (252)
.+| +.++|.+.+. ++++|||+||++||++|+.+.|.|.+++.+|+++.|++|+.+. +...|+|.++||+++|+
T Consensus 3 ~~i~~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 79 (105)
T 4euy_A 3 NTFKTIEELATYIE---EQQLVLLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAVFTGPTVLLFY 79 (105)
T ss_dssp -------CCSSSTT---CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC---------CCCCEEEEEE
T ss_pred cccCCHHHHHHHHh---cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCCCCCCEEEEEe
Confidence 344 4566666663 3469999999999999999999999999999999999999864 56899999999999999
Q ss_pred CCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 179 NGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 179 ~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+|+.+.++.|.. +.+.|..+|.+.
T Consensus 80 ~G~~~~~~~g~~------~~~~l~~~l~~~ 103 (105)
T 4euy_A 80 NGKEILRESRFI------SLENLERTIQLF 103 (105)
T ss_dssp TTEEEEEEESSC------CHHHHHHHHHTT
T ss_pred CCeEEEEEeCCc------CHHHHHHHHHHh
Confidence 999999999863 578888888753
No 14
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.8e-18 Score=131.27 Aligned_cols=100 Identities=17% Similarity=0.294 Sum_probs=82.7
Q ss_pred ceEEcCh-hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHH--CCCceEEEEeccC---CCCCCCCCcccEE
Q 025454 101 SVMPISG-SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARK--YPATKFVKIISTD---CIPNYPDRNLPTV 174 (252)
Q Consensus 101 ~v~eIs~-~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~k--y~~vkFvkI~~~~---~~~~~~i~~lPTl 174 (252)
.|.+|+. ++|.+.+.++.++++|||+||++||++|+.+.|.|.+++.+ ++++.|++|+.+. +...|+|.++||+
T Consensus 1 ~v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 80 (112)
T 3d6i_A 1 PVIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYF 80 (112)
T ss_dssp CEEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEE
Confidence 3678876 99998887523467999999999999999999999999998 6789999999875 3578999999999
Q ss_pred EEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 175 LVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 175 liy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
++|++|+.+.++.|.. ..+|..+|.+
T Consensus 81 ~~~~~G~~~~~~~G~~-------~~~l~~~l~~ 106 (112)
T 3d6i_A 81 IIIHKGTILKELSGAD-------PKEYVSLLED 106 (112)
T ss_dssp EEEETTEEEEEECSCC-------HHHHHHHHHH
T ss_pred EEEECCEEEEEecCCC-------HHHHHHHHHH
Confidence 9999999999998863 3457777654
No 15
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.77 E-value=4.8e-18 Score=127.68 Aligned_cols=100 Identities=24% Similarity=0.422 Sum_probs=87.2
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccCC---CCCCCCCcccEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTDC---IPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~~---~~~~~i~~lPTll 175 (252)
+.|..++.++|...+.+. ++++||+||++||++|+.+.|.|.+++.+|+ .+.|+.|+.+.. ...|++.++||++
T Consensus 2 ~~v~~l~~~~f~~~~~~~--~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKA--DGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLL 79 (108)
T ss_dssp TTEEECCTTTHHHHTTTC--SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEE
T ss_pred CcceecchhhHHHHHHhc--CCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 468899999999888644 3799999999999999999999999999997 599999998643 4789999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+|++|+.+.++.|. .+.+.|..+|.+
T Consensus 80 ~~~~G~~~~~~~G~------~~~~~l~~~l~~ 105 (108)
T 2trx_A 80 LFKNGEVAATKVGA------LSKGQLKEFLDA 105 (108)
T ss_dssp EEETTEEEEEEESC------CCHHHHHHHHHH
T ss_pred EEeCCEEEEEEecC------CCHHHHHHHHHH
Confidence 99999999999886 356788888865
No 16
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.77 E-value=4.6e-18 Score=131.42 Aligned_cols=103 Identities=19% Similarity=0.253 Sum_probs=90.1
Q ss_pred cCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC----CCCCCCCCccc
Q 025454 97 SRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD----CIPNYPDRNLP 172 (252)
Q Consensus 97 ~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~----~~~~~~i~~lP 172 (252)
...|.|..++.++|.+.+... ++++|||+||++||++|+.+.|.|.+++++|+++.|++|+.+. +...|+|.++|
T Consensus 15 ~~~~~v~~l~~~~~~~~~~~~-~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v~~~P 93 (124)
T 1faa_A 15 AIVGKVTEVNKDTFWPIVKAA-GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVP 93 (124)
T ss_dssp TTTTSEEEECTTTHHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSSSS
T ss_pred hcCCceEEecchhHHHHHHhc-CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCCCeee
Confidence 456789999999999999853 3479999999999999999999999999999999999999862 34789999999
Q ss_pred EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 173 TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 173 Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|+++|++|+.+.++.|.. .+.|..+|.+
T Consensus 94 t~~~~~~G~~~~~~~G~~-------~~~l~~~i~~ 121 (124)
T 1faa_A 94 TFKILKENSVVGEVTGAK-------YDKLLEAIQA 121 (124)
T ss_dssp EEEEEETTEEEEEEESSC-------HHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEcCCC-------HHHHHHHHHH
Confidence 999999999999988852 6778888765
No 17
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.77 E-value=1.4e-18 Score=133.83 Aligned_cols=98 Identities=18% Similarity=0.303 Sum_probs=85.8
Q ss_pred eEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC---CCCCCCCcccEEEEEE
Q 025454 102 VMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC---IPNYPDRNLPTVLVYN 178 (252)
Q Consensus 102 v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~---~~~~~i~~lPTlliy~ 178 (252)
....+.++|.+.+.+. ++++|||+||++||++|+.+.|.|.+++++|+++.|++|+.+.. ...|+|.++||+++|+
T Consensus 14 ~~~~t~~~f~~~l~~~-~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~ 92 (116)
T 3qfa_C 14 KQIESKTAFQEALDAA-GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKSMPTFQFFK 92 (116)
T ss_dssp BCCCCHHHHHHHHHHH-TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTCCSSSEEEEES
T ss_pred cCCCCHHHHHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCccccEEEEEe
Confidence 4445889999988753 34799999999999999999999999999999999999998754 5889999999999999
Q ss_pred CCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 179 NGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 179 ~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+|+.+.++.|. +.+.|+.+|.+
T Consensus 93 ~G~~~~~~~G~-------~~~~l~~~l~~ 114 (116)
T 3qfa_C 93 KGQKVGEFSGA-------NKEKLEATINE 114 (116)
T ss_dssp SSSEEEEEESC-------CHHHHHHHHHH
T ss_pred CCeEEEEEcCC-------CHHHHHHHHHH
Confidence 99999998875 46888888865
No 18
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.76 E-value=3.8e-18 Score=133.23 Aligned_cols=106 Identities=18% Similarity=0.354 Sum_probs=91.1
Q ss_pred hcCCCceEEc-ChhhHHHHHHcCC-CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCc
Q 025454 96 ISRFGSVMPI-SGSDFVREVSQAP-PDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRN 170 (252)
Q Consensus 96 ~~~fG~v~eI-s~~~f~~~V~~~~-~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~ 170 (252)
....|.|.+| +.++|...+..+. ++++|||.||++||++|+.+.|.|.+++.+|+++.|+.|+.+. +...|+|.+
T Consensus 12 ~~~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~ 91 (124)
T 1xfl_A 12 ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQA 91 (124)
T ss_dssp CCCCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTCCS
T ss_pred hcCCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCCCc
Confidence 3567889999 7899999987631 2479999999999999999999999999999999999999875 357899999
Q ss_pred ccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 171 LPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 171 lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+||+++|++|+.+.++.|. +.+.|..+|.+.
T Consensus 92 ~Pt~~~~~~G~~~~~~~G~-------~~~~l~~~l~~~ 122 (124)
T 1xfl_A 92 MPTFMFLKEGKILDKVVGA-------KKDELQSTIAKH 122 (124)
T ss_dssp SSEEEEEETTEEEEEEESC-------CHHHHHHHHHHH
T ss_pred cCEEEEEECCEEEEEEeCC-------CHHHHHHHHHHh
Confidence 9999999999999998874 367888887753
No 19
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.76 E-value=4.8e-18 Score=129.30 Aligned_cols=100 Identities=23% Similarity=0.411 Sum_probs=86.3
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC---CCCCCCCcccEEE
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC---IPNYPDRNLPTVL 175 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~---~~~~~i~~lPTll 175 (252)
.|.....+.++|...+.+ +++|||+||++||++|+.+.|.|.+++++|+++.|+.|+.+.. ...|+|.++||++
T Consensus 6 ~~~~~~~~~~~f~~~~~~---~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 82 (109)
T 3f3q_A 6 HMVTQFKTASEFDSAIAQ---DKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTLL 82 (109)
T ss_dssp CCCEECCSHHHHHHHTTS---SSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCCCHHHHHHHHhc---CCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCccCEEE
Confidence 344555678999888864 3699999999999999999999999999999999999998754 5889999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+|++|+.+.++.|. +.+.|+.+|.+.
T Consensus 83 ~~~~G~~~~~~~G~-------~~~~l~~~i~~~ 108 (109)
T 3f3q_A 83 LFKNGKEVAKVVGA-------NPAAIKQAIAAN 108 (109)
T ss_dssp EEETTEEEEEEESS-------CHHHHHHHHHHH
T ss_pred EEECCEEEEEEeCC-------CHHHHHHHHHhh
Confidence 99999999999885 357888888753
No 20
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.76 E-value=3.2e-18 Score=150.84 Aligned_cols=104 Identities=19% Similarity=0.293 Sum_probs=91.3
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccCC---CCCCCCCcccEE
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTDC---IPNYPDRNLPTV 174 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~~---~~~~~i~~lPTl 174 (252)
.+.|++++.++|.+.+. .+++++|||+||++||++|+.+.|.|.+++++|++ ++|++|+++.. ...|+|.++||+
T Consensus 6 ~~~v~~~~~~~f~~~~~-~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 6 VENIVNINESNLQQVLE-QSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp CTTEEECCTTTHHHHHT-TTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred CCccEECCHHHHHHHHH-hcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 46799999999999664 44568999999999999999999999999999987 99999998754 589999999999
Q ss_pred EEEECCeEEEEeecccccCCCCCHHHHHHHHHhcC
Q 025454 175 LVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQSD 209 (252)
Q Consensus 175 liy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g 209 (252)
++|++|+.+.++.|.. +.+.+..+|.+.-
T Consensus 85 ~~~~~G~~~~~~~g~~------~~~~l~~~l~~~l 113 (287)
T 3qou_A 85 YLFQNGQPVDGFQGPQ------PEEAIRALLDXVL 113 (287)
T ss_dssp EEEETTEEEEEEESCC------CHHHHHHHHHHHS
T ss_pred EEEECCEEEEEeeCCC------CHHHHHHHHHHHc
Confidence 9999999999999863 5678888887753
No 21
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.76 E-value=4.1e-18 Score=129.02 Aligned_cols=100 Identities=23% Similarity=0.382 Sum_probs=87.3
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccC---CCCCCCCCcccEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTD---CIPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~---~~~~~~i~~lPTll 175 (252)
|.|..++.++|...+.+. +++|||.||++||++|+.+.|.|.+++.+|+ .+.|+.|+.+. +...|++.++||++
T Consensus 5 ~~v~~l~~~~~~~~~~~~--~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 82 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKN--DKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLN 82 (112)
T ss_dssp CCCEEECTTTHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceEEecchhhHHHHHhhC--CCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEE
Confidence 578999999999988754 3789999999999999999999999999996 59999999874 45889999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+|++|+.+.++.|.. +.+.|..+|.+
T Consensus 83 ~~~~G~~~~~~~G~~------~~~~l~~~l~~ 108 (112)
T 1t00_A 83 VYQGGEVAKTIVGAK------PKAAIVRDLED 108 (112)
T ss_dssp EEETTEEEEEEESCC------CHHHHHHHTHH
T ss_pred EEeCCEEEEEEeCCC------CHHHHHHHHHH
Confidence 999999999998863 46778777765
No 22
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.76 E-value=5.5e-18 Score=126.49 Aligned_cols=98 Identities=21% Similarity=0.383 Sum_probs=85.4
Q ss_pred eEEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC---CCCCCCCcccEEEEE
Q 025454 102 VMPI-SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC---IPNYPDRNLPTVLVY 177 (252)
Q Consensus 102 v~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~---~~~~~i~~lPTlliy 177 (252)
|.+| +.++|.+.+... +++++||+||++||++|+.+.|.|.+++.+|+++.|+.|+.+.. ...|++.++||+++|
T Consensus 2 v~~i~~~~~~~~~l~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 80 (105)
T 3m9j_A 2 VKQIESKTAFQEALDAA-GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVKSMPTFQFF 80 (105)
T ss_dssp CEECCSHHHHHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTCCBSSEEEEE
T ss_pred eEEcCCHHHHHHHHHhc-CCCeEEEEEECCCChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCCCcCcEEEEE
Confidence 4567 678888888754 45799999999999999999999999999999999999998754 578999999999999
Q ss_pred ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 178 NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 178 ~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
++|+.+.++.|. +.+.|..+|.+
T Consensus 81 ~~g~~~~~~~g~-------~~~~l~~~l~~ 103 (105)
T 3m9j_A 81 KKGQKVGEFSGA-------NKEKLEATINE 103 (105)
T ss_dssp ETTEEEEEEESS-------CHHHHHHHHHH
T ss_pred ECCeEEEEEeCC-------CHHHHHHHHHH
Confidence 999999998875 46888888865
No 23
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.76 E-value=8e-18 Score=128.36 Aligned_cols=98 Identities=21% Similarity=0.333 Sum_probs=86.5
Q ss_pred ceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccC---CCCCCCCCcccEEEE
Q 025454 101 SVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTD---CIPNYPDRNLPTVLV 176 (252)
Q Consensus 101 ~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~---~~~~~~i~~lPTlli 176 (252)
.|++++.++|.+.+ + ++++||+||++||++|+.+.|.|.+++++|+ .+.|+.|+.+. +...|+|.++||+++
T Consensus 2 ~v~~l~~~~~~~~~-~---~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 77 (112)
T 2voc_A 2 AIVKATDQSFSAET-S---EGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLV 77 (112)
T ss_dssp CCEECCTTTHHHHH-S---SSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEE
T ss_pred CeEEecHHHHHHHh-C---CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 36789999999999 2 3699999999999999999999999999997 59999999874 347899999999999
Q ss_pred EECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 177 YNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 177 y~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|++|+.+.++.|.. +.+.|..+|.+.
T Consensus 78 ~~~G~~~~~~~G~~------~~~~l~~~l~~~ 103 (112)
T 2voc_A 78 LKDGEVVETSVGFK------PKEALQELVNKH 103 (112)
T ss_dssp EETTEEEEEEESCC------CHHHHHHHHHTT
T ss_pred EeCCEEEEEEeCCC------CHHHHHHHHHHH
Confidence 99999999999863 578899999865
No 24
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.76 E-value=5.9e-18 Score=126.31 Aligned_cols=98 Identities=23% Similarity=0.416 Sum_probs=87.0
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccCC---CCCCCCCcccEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTDC---IPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~~---~~~~~i~~lPTll 175 (252)
..+.+++.++|.+.+ +++++||+||++||++|+.+.|.|.+++++|++ +.|+.|+.+.. ...|++.++||++
T Consensus 3 ~~v~~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (106)
T 3die_A 3 MAIVKVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLI 78 (106)
T ss_dssp CCCEECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred cceEECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEE
Confidence 358889999999999 236999999999999999999999999999987 99999998753 5889999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+|++|+.+.++.|. .+.+.|..+|.+
T Consensus 79 ~~~~G~~~~~~~g~------~~~~~l~~~l~~ 104 (106)
T 3die_A 79 VFKDGQPVDKVVGF------QPKENLAEVLDK 104 (106)
T ss_dssp EEETTEEEEEEESC------CCHHHHHHHHHT
T ss_pred EEeCCeEEEEEeCC------CCHHHHHHHHHH
Confidence 99999999999886 357888888875
No 25
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.76 E-value=3.5e-18 Score=131.57 Aligned_cols=101 Identities=17% Similarity=0.321 Sum_probs=85.3
Q ss_pred CCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEE
Q 025454 98 RFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTV 174 (252)
Q Consensus 98 ~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTl 174 (252)
.+|.+.+++..++.+.+.+.+ ++|||.||++||++|+.+.|.|.+++++|+++.|++|+.+. +...|+|.++||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~--k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 87 (114)
T 2oe3_A 10 SYTSITKLTNLTEFRNLIKQN--DKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTF 87 (114)
T ss_dssp CGGGSCBCCSHHHHHHHHHHC--SEEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSBSEE
T ss_pred chhheeecCCHHHHHHHHhCC--CEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCcccEE
Confidence 467888886655555554433 69999999999999999999999999999999999999875 4578999999999
Q ss_pred EEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 175 LVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 175 liy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
++|++|+.+.++.|.. .+.|+.+|.+
T Consensus 88 ~~~~~G~~~~~~~G~~-------~~~l~~~l~~ 113 (114)
T 2oe3_A 88 VLGKDGQLIGKIIGAN-------PTALEKGIKD 113 (114)
T ss_dssp EEEETTEEEEEEESSC-------HHHHHHHHHT
T ss_pred EEEeCCeEEEEEeCCC-------HHHHHHHHHh
Confidence 9999999999998852 6788888764
No 26
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.76 E-value=1e-17 Score=125.43 Aligned_cols=101 Identities=19% Similarity=0.314 Sum_probs=88.9
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccCC---CCCCCCCcccEE
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTDC---IPNYPDRNLPTV 174 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~~---~~~~~i~~lPTl 174 (252)
-+.|..++.++|...+.+. +++||.||++||++|+.+.|.|.+++..|+ .+.|+.|+.+.. ...|++.++||+
T Consensus 3 ~~~v~~l~~~~~~~~~~~~---~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~ 79 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNN---KLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTT 79 (109)
T ss_dssp CCCCEECCTTTHHHHHHHS---SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCeEEEecHHHHHHHHhcC---CeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEE
Confidence 3578899999999999763 699999999999999999999999999998 599999998753 588999999999
Q ss_pred EEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 175 LVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 175 liy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
++|++|+.+.++.|. .+.+.|..+|.+.
T Consensus 80 ~~~~~g~~~~~~~g~------~~~~~l~~~l~~~ 107 (109)
T 3tco_A 80 LIFVNGQLVDSLVGA------VDEDTLESTVNKY 107 (109)
T ss_dssp EEEETTEEEEEEESC------CCHHHHHHHHHHH
T ss_pred EEEcCCcEEEeeecc------CCHHHHHHHHHHH
Confidence 999999999999886 3578888888753
No 27
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.76 E-value=8.2e-18 Score=125.76 Aligned_cols=101 Identities=20% Similarity=0.338 Sum_probs=87.7
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccCC---CCCCCCCcccEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTDC---IPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~~---~~~~~i~~lPTll 175 (252)
+.|..++.++|...+.+. ++++||+||++||++|+.+.|.|.+++.+|+ .+.|+.|+.+.. ...|++.++||++
T Consensus 2 ~~v~~l~~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKA--SGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLM 79 (107)
T ss_dssp CCEEECCTTTHHHHTTTC--SSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEE
T ss_pred CceeecchhhhhHHHHhC--CCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEE
Confidence 358899999999888543 4799999999999999999999999999997 599999998753 4789999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+|++|+.+.++.|. .+.+.|..+|.+.
T Consensus 80 ~~~~G~~~~~~~G~------~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 80 LVRDGKVIDKKVGA------LPKSQLKAWVESA 106 (107)
T ss_dssp EEETTEEEEEEESC------CCHHHHHHHHHHT
T ss_pred EEeCCEEEEEecCC------CCHHHHHHHHHhc
Confidence 99999999998886 3578888888753
No 28
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.75 E-value=7.5e-18 Score=136.99 Aligned_cols=101 Identities=14% Similarity=0.183 Sum_probs=88.8
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccCC---CCCCCCCcccEE
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTDC---IPNYPDRNLPTV 174 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~~---~~~~~i~~lPTl 174 (252)
.|.+.+++..+|.+.+ + .+++|||+||++||++|+.+.|.|++++++|+ .++|++|+.+.. ...|+|+++||+
T Consensus 46 ~~~~~~l~~~~f~~~~-~--~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 122 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-R--DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAF 122 (155)
T ss_dssp CSSEEECCHHHHHHHT-T--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEE
T ss_pred CCCCccCCHHHHHHHH-h--CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEE
Confidence 4678999999999988 3 34799999999999999999999999999997 599999998754 478999999999
Q ss_pred EEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 175 LVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 175 liy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
++|++|+.+.++.|. .+.+.|..+|.+.
T Consensus 123 ~~~~~G~~~~~~~G~------~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 123 ILFHKGRELARAAGA------RPASELVGFVRGK 150 (155)
T ss_dssp EEEETTEEEEEEESC------CCHHHHHHHHHHH
T ss_pred EEEeCCeEEEEecCC------CCHHHHHHHHHHH
Confidence 999999999999986 3578888888763
No 29
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.75 E-value=2.3e-18 Score=136.26 Aligned_cols=99 Identities=14% Similarity=0.149 Sum_probs=87.1
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEec---------cC---CCCCC
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIS---------TD---CIPNY 166 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~---------~~---~~~~~ 166 (252)
.|.+..++.++|.+.+.+ +|||+||++||++|+.+.|.|.+++++|+ ++|++|+. +. +..+|
T Consensus 15 ~~~v~~l~~~~~~~~~~~-----~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~ 88 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG-----DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKA 88 (135)
T ss_dssp TTEEEECCHHHHHHHHTS-----SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred cCceeecCHHHHHHHhCC-----cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHc
Confidence 578999999999998854 79999999999999999999999999998 99999998 43 34789
Q ss_pred CCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhcC
Q 025454 167 PDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQSD 209 (252)
Q Consensus 167 ~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g 209 (252)
+|.++||+++|++|+.+.+++|.. +.+.++.++.+..
T Consensus 89 ~v~~~Pt~~~~~~G~~v~~~~G~~------~~~~~~~~i~~~~ 125 (135)
T 3emx_A 89 GVEGTPTLVFYKEGRIVDKLVGAT------PWSLKVEKAREIY 125 (135)
T ss_dssp TCCSSSEEEEEETTEEEEEEESCC------CHHHHHHHHHHHC
T ss_pred CCceeCeEEEEcCCEEEEEEeCCC------CHHHHHHHHHHHh
Confidence 999999999999999999999974 4677777777653
No 30
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.75 E-value=5.5e-18 Score=128.12 Aligned_cols=102 Identities=20% Similarity=0.325 Sum_probs=87.0
Q ss_pred CceEEc-ChhhHHHHHHcCC-CCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccCC---CCCCCCCcccE
Q 025454 100 GSVMPI-SGSDFVREVSQAP-PDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTDC---IPNYPDRNLPT 173 (252)
Q Consensus 100 G~v~eI-s~~~f~~~V~~~~-~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~~---~~~~~i~~lPT 173 (252)
|.|..| +.++|.+.+.++. .++++||+||++||++|+.+.|.|.+++..|+ .+.|+.|+.+.. ...|+|.++||
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 81 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPT 81 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSE
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccE
Confidence 568899 6789999987521 13689999999999999999999999999999 699999998753 57899999999
Q ss_pred EEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 174 VLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 174 lliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+++|++|+.+.++.|. +.+.|..+|.+.
T Consensus 82 ~~~~~~G~~~~~~~G~-------~~~~l~~~l~~~ 109 (112)
T 1ep7_A 82 FHVYKDGVKADDLVGA-------SQDKLKALVAKH 109 (112)
T ss_dssp EEEEETTEEEEEEESC-------CHHHHHHHHHHH
T ss_pred EEEEECCeEEEEEcCC-------CHHHHHHHHHHH
Confidence 9999999999988875 367788887753
No 31
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.75 E-value=9.5e-18 Score=131.81 Aligned_cols=100 Identities=23% Similarity=0.390 Sum_probs=87.4
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccC---CCCCCCCCcccEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTD---CIPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~---~~~~~~i~~lPTll 175 (252)
+.|..++.++|...+.+. +++|||.||++||++|+.+.|.|.++++.|+ .+.|++|+.+. +...|+|.++||++
T Consensus 22 ~~v~~l~~~~f~~~~~~~--~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 99 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKA--DGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLL 99 (128)
T ss_dssp CCSEEECTTTHHHHTTTC--SSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEE
T ss_pred cccEecChhhHHHHHHhc--CCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEE
Confidence 458899999999888543 4799999999999999999999999999998 59999999863 56889999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+|++|+.+.++.|. .+.+.|..+|.+
T Consensus 100 ~~~~G~~~~~~~G~------~~~~~l~~~l~~ 125 (128)
T 2o8v_B 100 LFKNGEVAATKVGA------LSKGQLKEFLDA 125 (128)
T ss_dssp EEETTEEEEEEESC------CCHHHHHHHHHH
T ss_pred EEeCCEEEEEEcCC------CCHHHHHHHHHH
Confidence 99999999999886 356788888865
No 32
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.75 E-value=3.6e-18 Score=130.22 Aligned_cols=97 Identities=12% Similarity=0.233 Sum_probs=84.2
Q ss_pred EEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEEEEEEC
Q 025454 103 MPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTVLVYNN 179 (252)
Q Consensus 103 ~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTlliy~~ 179 (252)
..++.++| +.+.+. +++||.||++||++|+.+.|.|.+++..|+.+.|++|+.+. +...|++.++||+++|++
T Consensus 6 ~~~~~~~f-~~~~~~---~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 81 (110)
T 2l6c_A 6 DITTEAGM-AHFEGL---SDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGFERVPTLVFIRD 81 (110)
T ss_dssp BCGGGCSH-HHHTTC---SEEEEEEECSSCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTCCSSCEEEEEES
T ss_pred ecCCHHHH-HHHHcC---CCEEEEEECCCCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCCcccCEEEEEEC
Confidence 34578899 777543 58999999999999999999999999999999999999864 357899999999999999
Q ss_pred CeEEEEeecccccCCCCCHHHHHHHHHhcC
Q 025454 180 GAVKANYVGLRSFGRRCTPEGVALVLCQSD 209 (252)
Q Consensus 180 G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g 209 (252)
|+.+.++.|. .+.+.|..+|..++
T Consensus 82 G~~v~~~~G~------~~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 82 GKVAKVFSGI------MNPRELQALYASIH 105 (110)
T ss_dssp SSEEEEEESC------CCHHHHHHHHHTC-
T ss_pred CEEEEEEcCC------CCHHHHHHHHHHHh
Confidence 9999999986 35788999998764
No 33
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.75 E-value=1.6e-17 Score=122.95 Aligned_cols=97 Identities=25% Similarity=0.417 Sum_probs=85.4
Q ss_pred eEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEEEEEE
Q 025454 102 VMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTVLVYN 178 (252)
Q Consensus 102 v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTlliy~ 178 (252)
|.+++.++|.+.+.+. +++||+||++||++|+.+.|.|.++++.|+++.|+.|+.+. +...|++.++||+++|+
T Consensus 1 V~~l~~~~~~~~~~~~---~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 77 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASH---EIAVVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGVMSLPTVIFFK 77 (104)
T ss_dssp CEECCTTTHHHHHHHS---SEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSCEEEEEE
T ss_pred CeecCHHHHHHHHhcC---CcEEEEEECCCChhHHHHhHHHHHHHHHcCCceEEEEECCCCHHHHHhCCccccCEEEEEE
Confidence 5678999999999543 59999999999999999999999999999999999999875 35789999999999999
Q ss_pred CCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 179 NGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 179 ~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+|+.+.++.|. .+.+.|..+|.+
T Consensus 78 ~g~~~~~~~g~------~~~~~l~~~l~~ 100 (104)
T 2e0q_A 78 DGEPVDEIIGA------VPREEIEIRIKN 100 (104)
T ss_dssp TTEEEEEEESC------CCHHHHHHHHHH
T ss_pred CCeEhhhccCC------CCHHHHHHHHHH
Confidence 99999998886 356788888765
No 34
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.75 E-value=5.4e-18 Score=134.76 Aligned_cols=100 Identities=20% Similarity=0.292 Sum_probs=87.8
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccCC---CCCCCCCcccEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTDC---IPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~~---~~~~~i~~lPTll 175 (252)
+.|..++.++|.+.+.+.+ ++|||.||++||++|+.+.|.|.+++++|++ +.|++|+.+.. ..+|+|.++||++
T Consensus 6 ~~v~~l~~~~f~~~~~~~~--~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 83 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSK--KPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFK 83 (140)
T ss_dssp TTEEEECHHHHHHHTTTCS--SCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEE
T ss_pred cceEEcchHhHHHHHHhCC--CcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEE
Confidence 5799999999998777653 7999999999999999999999999999988 99999998753 5789999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+|++|+.+.++.|.. +.+.|..+|.+
T Consensus 84 ~~~~G~~~~~~~G~~------~~~~l~~~l~~ 109 (140)
T 3hz4_A 84 FFCHGRPVWEQVGQI------YPSILKNAVRD 109 (140)
T ss_dssp EEETTEEEEEEESSC------CHHHHHHHHHH
T ss_pred EEeCCcEEEEEcCCC------CHHHHHHHHHH
Confidence 999999999998863 46777777765
No 35
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.75 E-value=1.3e-17 Score=142.83 Aligned_cols=104 Identities=22% Similarity=0.386 Sum_probs=92.7
Q ss_pred cCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCCCCCCccc
Q 025454 97 SRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIPNYPDRNLP 172 (252)
Q Consensus 97 ~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~~~i~~lP 172 (252)
+.+|.+..+|.++|...+.+.+ ++|||+||++||++|+.+.|.|.+++++|++ +.|++|+++. +...|+|.++|
T Consensus 9 ~~~~~~~~lt~~~f~~~v~~~~--k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~P 86 (222)
T 3dxb_A 9 PMSDKIIHLTDDSFDTDVLKAD--GAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIP 86 (222)
T ss_dssp CCSCCCEECCTTTHHHHHTTCS--SCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBS
T ss_pred CCCCCceeCCHHHHHHHHHhcC--CEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCC
Confidence 5678999999999999886643 7999999999999999999999999999987 9999999874 46899999999
Q ss_pred EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 173 TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 173 Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|+++|++|+.+.++.|. .+.+.|..+|.+.
T Consensus 87 t~~~~~~G~~~~~~~G~------~~~~~l~~~l~~~ 116 (222)
T 3dxb_A 87 TLLLFKNGEVAATKVGA------LSKGQLKEFLDAN 116 (222)
T ss_dssp EEEEEETTEEEEEEESC------CCHHHHHHHHHHH
T ss_pred EEEEEECCeEEEEeccc------cChHHHHHHHHhh
Confidence 99999999999999986 3578888888764
No 36
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.75 E-value=1.9e-17 Score=123.12 Aligned_cols=98 Identities=15% Similarity=0.320 Sum_probs=84.4
Q ss_pred eEEcCh-hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEEEEE
Q 025454 102 VMPISG-SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTVLVY 177 (252)
Q Consensus 102 v~eIs~-~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTlliy 177 (252)
|.+|+. ++|.+.+.+. +++++||.||++||++|+.+.|.|.+++.+|+++.|+.|+.+. +...|++.++||+++|
T Consensus 1 v~~i~~~~~~~~~l~~~-~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (104)
T 2vim_A 1 MRVLATAADLEKLINEN-KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVTAMPTFVFI 79 (104)
T ss_dssp CEECCSHHHHHHHHHTT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CeecCCHHHHHHHHHhc-CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCCccccEEEEE
Confidence 457755 8888888753 4579999999999999999999999999999999999999875 3578999999999999
Q ss_pred ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 178 NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 178 ~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
++|+.+.++.|. +.+.|..+|.+
T Consensus 80 ~~g~~~~~~~G~-------~~~~l~~~l~~ 102 (104)
T 2vim_A 80 KDGKEVDRFSGA-------NETKLRETITR 102 (104)
T ss_dssp ETTEEEEEEESS-------CHHHHHHHHHH
T ss_pred eCCcEEEEEeCC-------CHHHHHHHHHh
Confidence 999999988873 36778888765
No 37
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.75 E-value=1.1e-17 Score=125.88 Aligned_cols=100 Identities=18% Similarity=0.281 Sum_probs=87.4
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC----CceEEEEeccC---CCCCCCCCcc
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP----ATKFVKIISTD---CIPNYPDRNL 171 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~----~vkFvkI~~~~---~~~~~~i~~l 171 (252)
-+.|..++.++|.+.+. . +++||.||++||++|+.+.|.|.++++++. .+.|++|+.+. +...|+|.++
T Consensus 4 ~~~v~~l~~~~~~~~~~-~---~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 79 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA-E---GITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGY 79 (111)
T ss_dssp -CCSEECCTTTHHHHHH-S---SEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCcceEcChhhHHHHhc-C---CcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcc
Confidence 35789999999999997 2 589999999999999999999999999874 69999999875 3589999999
Q ss_pred cEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 172 PTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 172 PTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
||+++|++|+.+.++.|. .+.+.|..+|.++
T Consensus 80 Pt~~~~~~g~~~~~~~g~------~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 80 PTLLLFRGGKKVSEHSGG------RDLDSLHRFVLSQ 110 (111)
T ss_dssp SEEEEEETTEEEEEECSC------CSHHHHHHHHHHH
T ss_pred cEEEEEeCCcEEEeccCC------cCHHHHHHHHHhc
Confidence 999999999999998885 4578888888763
No 38
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.75 E-value=1.7e-17 Score=123.99 Aligned_cols=100 Identities=19% Similarity=0.332 Sum_probs=86.9
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccC---CCCCCCCCcccEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTD---CIPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~---~~~~~~i~~lPTll 175 (252)
|.|.+++.++|...+.+. +++||.||++||++|+.+.|.|.+++..|+ .+.|+.|+.+. +...|++.++||++
T Consensus 1 ~~v~~l~~~~~~~~~~~~---~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 77 (109)
T 2yzu_A 1 AKPIEVTDQNFDETLGQH---PLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVI 77 (109)
T ss_dssp -CCEECCTTTHHHHHHHC---SEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEccHhHHHHHhcCC---CeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEE
Confidence 578999999999666543 599999999999999999999999999998 59999999875 35889999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+|++|+.+.++.|. .+.+.|..+|.+.
T Consensus 78 ~~~~g~~~~~~~g~------~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 78 LFKDGQPVEVLVGA------QPKRNYQAKIEKH 104 (109)
T ss_dssp EEETTEEEEEEESC------CCHHHHHHHHHTT
T ss_pred EEeCCcEeeeEeCC------CCHHHHHHHHHHH
Confidence 99999999988886 3578898888764
No 39
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.75 E-value=2e-17 Score=127.19 Aligned_cols=103 Identities=19% Similarity=0.321 Sum_probs=87.5
Q ss_pred CCceEEcChhhHHHHHHcC-CCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEE
Q 025454 99 FGSVMPISGSDFVREVSQA-PPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTV 174 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~-~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTl 174 (252)
...+..++.++|...+.++ +.+++|||+||++||++|+.+.|.|.+++++|+++.|++|+.+. +...|+|.++||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 91 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSVEAMPTF 91 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCCCcccEE
Confidence 3446666999999999762 12368999999999999999999999999999999999999875 3578999999999
Q ss_pred EEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 175 LVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 175 liy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
++|++|+.+.++.|. . .+.|..+|.+.
T Consensus 92 ~~~~~G~~~~~~~G~------~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 92 LFMKEGDVKDRVVGA------I-KEELTAKVGLH 118 (122)
T ss_dssp EEEETTEEEEEEESS------C-HHHHHHHHHHH
T ss_pred EEEeCCEEEEEEeCc------C-HHHHHHHHHHH
Confidence 999999999988875 2 67888888763
No 40
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.75 E-value=1.9e-17 Score=125.35 Aligned_cols=101 Identities=19% Similarity=0.294 Sum_probs=87.9
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCCCCCCcccEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~~~i~~lPTll 175 (252)
+.|..++.++|...+.+. ++++||+||++||++|+.+.|.|.+++..|++ +.|+.|+.+. +...|+|.++||++
T Consensus 7 ~~v~~l~~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~ 84 (115)
T 1thx_A 7 KGVITITDAEFESEVLKA--EQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALR 84 (115)
T ss_dssp CSEEECCGGGHHHHTTTC--SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEE
T ss_pred CceEEeeccchhhHhhcC--CceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEE
Confidence 458999999999988543 47999999999999999999999999999984 9999999875 35789999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+|++|+.+.++.|.. +.+.|..+|.+.
T Consensus 85 ~~~~G~~~~~~~g~~------~~~~l~~~l~~~ 111 (115)
T 1thx_A 85 LVKGEQILDSTEGVI------SKDKLLSFLDTH 111 (115)
T ss_dssp EEETTEEEEEEESCC------CHHHHHHHHHHH
T ss_pred EEcCCEEEEEecCCC------CHHHHHHHHHHH
Confidence 999999999988863 568888888753
No 41
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.75 E-value=1.4e-17 Score=127.58 Aligned_cols=99 Identities=21% Similarity=0.332 Sum_probs=86.0
Q ss_pred CceEEcCh-hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEEE
Q 025454 100 GSVMPISG-SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~-~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTll 175 (252)
+.|.+++. ++|...+.+. +++++||+||++||++|+.+.|.|.+++++| ++.|++|+.+. +...|+|.++||++
T Consensus 13 ~~v~~l~~~~~~~~~l~~~-~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 90 (117)
T 2xc2_A 13 SELIELKQDGDLESLLEQH-KNKLVVVDFFATWCGPCKTIAPLFKELSEKY-DAIFVKVDVDKLEETARKYNISAMPTFI 90 (117)
T ss_dssp CEEEECCSTTHHHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-SSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred heeEEeCCHHHHHHHHHhC-CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-CcEEEEEECCccHHHHHHcCCCccceEE
Confidence 34889977 9999988853 3579999999999999999999999999999 99999999875 35789999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+|++|+.+.++.|. +.+.|..+|.+
T Consensus 91 ~~~~G~~~~~~~G~-------~~~~l~~~l~~ 115 (117)
T 2xc2_A 91 AIKNGEKVGDVVGA-------SIAKVEDMIKK 115 (117)
T ss_dssp EEETTEEEEEEESS-------CHHHHHHHHHH
T ss_pred EEeCCcEEEEEeCC-------CHHHHHHHHHH
Confidence 99999999998874 36778888765
No 42
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.74 E-value=1.3e-17 Score=130.74 Aligned_cols=96 Identities=20% Similarity=0.346 Sum_probs=84.3
Q ss_pred eEEcCh-hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEEEEE
Q 025454 102 VMPISG-SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTVLVY 177 (252)
Q Consensus 102 v~eIs~-~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTlliy 177 (252)
|.+|+. ++|.+.+. ++++|||.||++||++|+.+.|.|.+++++|+++.|++|+.+. +...|+|.++||+++|
T Consensus 21 v~~l~~~~~f~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~ 97 (125)
T 1r26_A 21 VVDVYSVEQFRNIMS---EDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVLQLPTFIIA 97 (125)
T ss_dssp CEEECCHHHHHHHHH---SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred eEECCCHHHHHHHHc---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 788987 99999884 2369999999999999999999999999999999999999875 3578999999999999
Q ss_pred ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 178 NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 178 ~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
++|+.+.++.|. +.+.|..+|.+
T Consensus 98 ~~G~~~~~~~G~-------~~~~l~~~l~~ 120 (125)
T 1r26_A 98 RSGKMLGHVIGA-------NPGMLRQKLRD 120 (125)
T ss_dssp ETTEEEEEEESS-------CHHHHHHHHHH
T ss_pred eCCeEEEEEeCC-------CHHHHHHHHHH
Confidence 999999988873 35778777765
No 43
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.74 E-value=1.2e-17 Score=127.25 Aligned_cols=104 Identities=17% Similarity=0.330 Sum_probs=88.4
Q ss_pred CCCceEEc-ChhhHHHHHHcCC-CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC---CCCCCCCccc
Q 025454 98 RFGSVMPI-SGSDFVREVSQAP-PDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC---IPNYPDRNLP 172 (252)
Q Consensus 98 ~fG~v~eI-s~~~f~~~V~~~~-~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~---~~~~~i~~lP 172 (252)
..|.+..| +.++|...+..+. .++++||.||++||++|+.+.|.|.+++.+|+++.|+.|+.+.. ...|++.++|
T Consensus 4 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~P 83 (118)
T 2vm1_A 4 EEGAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNVEAMP 83 (118)
T ss_dssp -CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSBS
T ss_pred CCCceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCCCcCc
Confidence 35789999 6799999887631 23689999999999999999999999999999999999998754 5789999999
Q ss_pred EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 173 TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 173 Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|+++|++|+.+.++.|. +.+.|..+|.+.
T Consensus 84 t~~~~~~g~~~~~~~g~-------~~~~l~~~l~~~ 112 (118)
T 2vm1_A 84 TFLFIKDGEKVDSVVGG-------RKDDIHTKIVAL 112 (118)
T ss_dssp EEEEEETTEEEEEEESC-------CHHHHHHHHHHH
T ss_pred EEEEEeCCeEEEEecCC-------CHHHHHHHHHHH
Confidence 99999999999988874 367787777653
No 44
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.74 E-value=1.2e-17 Score=134.75 Aligned_cols=105 Identities=17% Similarity=0.291 Sum_probs=88.4
Q ss_pred hcCCCceEEcC-hhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcc
Q 025454 96 ISRFGSVMPIS-GSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNL 171 (252)
Q Consensus 96 ~~~fG~v~eIs-~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~l 171 (252)
...+|.|..++ .++|...+.+. ++++|||.||++||++|+.+.|.|.+++++|+++.|++|+.+. +...|+|.++
T Consensus 8 ~~~~~~v~~l~~~~~~~~~~~~~-~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 86 (153)
T 2wz9_A 8 EAAVAAVEEVGSAGQFEELLRLK-AKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISSV 86 (153)
T ss_dssp ----CCSEEECSHHHHHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSS
T ss_pred ccccCCeEEcCCHHHHHHHHHhc-CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCCCCC
Confidence 34578899996 68898888764 3579999999999999999999999999999999999999875 3578999999
Q ss_pred cEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 172 PTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 172 PTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
||+++|++|+.+.++.|. +.+.|..+|.+.
T Consensus 87 Pt~~~~~~G~~~~~~~G~-------~~~~l~~~i~~~ 116 (153)
T 2wz9_A 87 PTFLFFKNSQKIDRLDGA-------HAPELTKKVQRH 116 (153)
T ss_dssp SEEEEEETTEEEEEEESS-------CHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeCC-------CHHHHHHHHHHH
Confidence 999999999999998875 356788888764
No 45
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.74 E-value=8e-18 Score=127.22 Aligned_cols=103 Identities=17% Similarity=0.374 Sum_probs=87.6
Q ss_pred CCCceEEc-ChhhHHHHHHcCC-CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC---CCCCCCCccc
Q 025454 98 RFGSVMPI-SGSDFVREVSQAP-PDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC---IPNYPDRNLP 172 (252)
Q Consensus 98 ~fG~v~eI-s~~~f~~~V~~~~-~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~---~~~~~i~~lP 172 (252)
..|.|..| +.++|.+.+..+. ++++|||+||++||++|+.+.|.|.+++..|+++.|+.|+.+.. ...|++.++|
T Consensus 2 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~P 81 (113)
T 1ti3_A 2 EEGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEAMP 81 (113)
T ss_dssp CCCCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHCSSTT
T ss_pred CCCceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCCCccc
Confidence 35789999 7799999998632 35799999999999999999999999999999999999998753 5789999999
Q ss_pred EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 173 TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 173 Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|+++|++|+.+.++.|. +.+.|..+|.+
T Consensus 82 t~~~~~~G~~~~~~~g~-------~~~~l~~~l~~ 109 (113)
T 1ti3_A 82 TFIFLKDGKLVDKTVGA-------DKDGLPTLVAK 109 (113)
T ss_dssp EEEEEETTEEEEEEECC-------CTTHHHHHHHH
T ss_pred EEEEEeCCEEEEEEecC-------CHHHHHHHHHH
Confidence 99999999999998874 23566666654
No 46
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.74 E-value=5.1e-18 Score=133.87 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=87.4
Q ss_pred CCceEEc-ChhhHHHHHHcC-CCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC---CCCCCCCcccE
Q 025454 99 FGSVMPI-SGSDFVREVSQA-PPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC---IPNYPDRNLPT 173 (252)
Q Consensus 99 fG~v~eI-s~~~f~~~V~~~-~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~---~~~~~i~~lPT 173 (252)
-+.+..+ +.++|.+.+..+ .++++|||+||++||++|+.+.|.|.+++.+|+++.|+.|+.+.. ...|+|.++||
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt 102 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPT 102 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCEESE
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCCcccE
Confidence 4567777 589999988643 134689999999999999999999999999999999999998753 58899999999
Q ss_pred EEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 174 VLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 174 lliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+++|++|+.+.++.|. +.+.|..+|.+.
T Consensus 103 ~~~~~~G~~~~~~~G~-------~~~~l~~~l~~~ 130 (139)
T 3d22_A 103 FFFLRDGQQVDKLVGA-------NKPELHKKITAI 130 (139)
T ss_dssp EEEEETTEEEEEEESC-------CHHHHHHHHHHH
T ss_pred EEEEcCCeEEEEEeCC-------CHHHHHHHHHHH
Confidence 9999999999998875 357788877653
No 47
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.74 E-value=1.2e-17 Score=125.30 Aligned_cols=99 Identities=19% Similarity=0.359 Sum_probs=86.4
Q ss_pred ceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCCCCCCcccEEEE
Q 025454 101 SVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIPNYPDRNLPTVLV 176 (252)
Q Consensus 101 ~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~~~i~~lPTlli 176 (252)
.|..++.++|.+.+.+. ++++||.||++||++|+.+.|.|.+++.+|++ +.|+.|+.+. +...|++.++||+++
T Consensus 2 ~v~~l~~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 79 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLES--SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMV 79 (107)
T ss_dssp CCEEECHHHHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEE
T ss_pred ccEeccHHHHHHHHhcC--CCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEE
Confidence 36789999999988654 37899999999999999999999999999985 9999999874 357899999999999
Q ss_pred EECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 177 YNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 177 y~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|++|+.+.++.|.. +.+.|..+|.+
T Consensus 80 ~~~G~~~~~~~G~~------~~~~l~~~l~~ 104 (107)
T 1dby_A 80 FKGGKKCETIIGAV------PKATIVQTVEK 104 (107)
T ss_dssp ESSSSEEEEEESCC------CHHHHHHHHHH
T ss_pred EeCCEEEEEEeCCC------CHHHHHHHHHH
Confidence 99999999998863 46788888875
No 48
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.74 E-value=2e-17 Score=123.17 Aligned_cols=98 Identities=23% Similarity=0.396 Sum_probs=86.0
Q ss_pred eEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCCCCCCcccEEEEE
Q 025454 102 VMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIPNYPDRNLPTVLVY 177 (252)
Q Consensus 102 v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~~~i~~lPTlliy 177 (252)
|..++.++|...+.+. ++++||.||++||++|+.+.|.|.+++.+|++ +.|+.|+.+. +...|++.++||+++|
T Consensus 2 v~~~~~~~~~~~~~~~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLES--EVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp CEECCTTTHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceechhhhHHHHHhcC--CCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEE
Confidence 6788999999988654 37899999999999999999999999999986 9999999875 3578999999999999
Q ss_pred ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 178 NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 178 ~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
++|+.+.++.|.. +.+.|..+|.+
T Consensus 80 ~~g~~~~~~~G~~------~~~~l~~~l~~ 103 (105)
T 1fb6_A 80 KNGERKESIIGAV------PKSTLTDSIEK 103 (105)
T ss_dssp ETTEEEEEEEECC------CHHHHHHHHHH
T ss_pred eCCeEEEEEecCC------CHHHHHHHHHh
Confidence 9999999999863 56788888765
No 49
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.74 E-value=7.8e-18 Score=131.18 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=85.6
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHC------CCceEEEEeccC---CCCCCCCC
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKY------PATKFVKIISTD---CIPNYPDR 169 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky------~~vkFvkI~~~~---~~~~~~i~ 169 (252)
-+.|..++.++|...+.+. +++|||+||++||++|+.+.|.|.++|..| +.+.|++||++. +...|+|.
T Consensus 14 ~~~v~~l~~~~f~~~~~~~--~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~ 91 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDP--EKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVS 91 (127)
T ss_dssp CCCCEECCTTTHHHHHTCT--TCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCC
T ss_pred CCceEECChhhHHHHHhCC--CCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCc
Confidence 4579999999999999754 369999999999999999999999999864 359999999875 35889999
Q ss_pred cccEEEEEECCeEE--EEeecccccCCCCCHHHHHHHHHhcC
Q 025454 170 NLPTVLVYNNGAVK--ANYVGLRSFGRRCTPEGVALVLCQSD 209 (252)
Q Consensus 170 ~lPTlliy~~G~~v--~~~vG~~~~G~~~~~e~lE~~L~~~g 209 (252)
++||+++|++|..+ ..+.|. .+.+.|..+|.+.+
T Consensus 92 ~~Pt~~~~~~g~~~~~~~~~G~------~~~~~l~~~i~~~s 127 (127)
T 3h79_A 92 GFPTMRYYTRIDKQEPFEYSGQ------RYLSLVDSFVFQNT 127 (127)
T ss_dssp SSSEEEEECSSCSSSCEECCSC------CCHHHHHHHHHHHC
T ss_pred cCCEEEEEeCCCCCCceEecCC------ccHHHHHHHHHhcC
Confidence 99999999998764 244443 57899999988754
No 50
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.74 E-value=3.6e-17 Score=124.49 Aligned_cols=102 Identities=19% Similarity=0.290 Sum_probs=87.4
Q ss_pred cCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccE
Q 025454 97 SRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPT 173 (252)
Q Consensus 97 ~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPT 173 (252)
+..+....++..+|.+.+.+. ++|||+||++||++|+.+.|.|.+++.+|+++.|+.|+.+. +...|+|.++||
T Consensus 6 ~~~~~~~~~~~~~f~~~~~~~---k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 82 (112)
T 1syr_A 6 HHHMVKIVTSQAEFDSIISQN---ELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENITSMPT 82 (112)
T ss_dssp ---CCEEECSHHHHHHHHHHC---SEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred cceeEEEECCHHHHHHHHccC---CeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCCCcccE
Confidence 344567778999999999643 69999999999999999999999999999999999999875 357899999999
Q ss_pred EEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 174 VLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 174 lliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+++|++|+.+.++.|. +.+.|..+|.+.
T Consensus 83 ~~~~~~G~~~~~~~G~-------~~~~l~~~l~~~ 110 (112)
T 1syr_A 83 FKVYKNGSSVDTLLGA-------NDSALKQLIEKY 110 (112)
T ss_dssp EEEEETTEEEEEEESC-------CHHHHHHHHHTT
T ss_pred EEEEECCcEEEEEeCC-------CHHHHHHHHHHh
Confidence 9999999999988875 468888888753
No 51
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.73 E-value=1.4e-17 Score=134.60 Aligned_cols=99 Identities=12% Similarity=0.179 Sum_probs=82.9
Q ss_pred eEEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccCC---CCCCCCCcccEEEE
Q 025454 102 VMPI-SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTDC---IPNYPDRNLPTVLV 176 (252)
Q Consensus 102 v~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~~---~~~~~i~~lPTlli 176 (252)
+..+ +.++|...+... ++++|||+|||+||++|+.+.|.|.+++++|++ +.|++|+.+.. ...|+|.++||+++
T Consensus 5 l~~i~~~~~~~~~i~~~-~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~ 83 (149)
T 3gix_A 5 LPKLTSKKEVDQAIKST-AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVF 83 (149)
T ss_dssp CCEECSHHHHHHHHHHC-CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEE
T ss_pred eeecCCHHHHHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEE
Confidence 3344 788999998743 347999999999999999999999999999988 99999998754 47899999999999
Q ss_pred EECCeEE---------EEeec-ccccCCCCCHHHHHHHHHh
Q 025454 177 YNNGAVK---------ANYVG-LRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 177 y~~G~~v---------~~~vG-~~~~G~~~~~e~lE~~L~~ 207 (252)
|++|+.+ .+++| + .+.+.|..+|.+
T Consensus 84 ~~~G~~v~~~~g~~~~~~~~G~~------~~~~~l~~~l~~ 118 (149)
T 3gix_A 84 FFNGQHMKVDYGSPDHTKFVGSF------KTKQDFIDLIEV 118 (149)
T ss_dssp EETTEEEEEECSSSCCSCEESCC------SSHHHHHHHHHH
T ss_pred EECCeEEEeecCCCCCCeEeeec------CCHHHHHHHHHH
Confidence 9999999 77777 4 346677666654
No 52
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.73 E-value=4.6e-17 Score=121.45 Aligned_cols=98 Identities=18% Similarity=0.360 Sum_probs=84.4
Q ss_pred eEEcCh-hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHC-CCceEEEEeccCC---CCCCCCCcccEEEE
Q 025454 102 VMPISG-SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKY-PATKFVKIISTDC---IPNYPDRNLPTVLV 176 (252)
Q Consensus 102 v~eIs~-~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky-~~vkFvkI~~~~~---~~~~~i~~lPTlli 176 (252)
|.+|+. ++|.+.+.+. +++++||.||++||++|+.+.|.|.+++..| +.+.|+.|+.+.. ...|++.++||+++
T Consensus 2 v~~l~~~~~~~~~l~~~-~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKA-SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVF 80 (106)
T ss_dssp EEECCSHHHHHHHHHHH-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceecCCHHHHHHHHHhc-CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEE
Confidence 677876 8999988752 3479999999999999999999999999999 6799999998753 57899999999999
Q ss_pred EECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 177 YNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 177 y~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|++|+.+.++.|. +.+.|..+|.+
T Consensus 81 ~~~G~~~~~~~g~-------~~~~l~~~i~~ 104 (106)
T 1xwb_A 81 LKNGVKVEEFAGA-------NAKRLEDVIKA 104 (106)
T ss_dssp EETTEEEEEEESC-------CHHHHHHHHHH
T ss_pred EcCCcEEEEEcCC-------CHHHHHHHHHH
Confidence 9999999988873 36778888765
No 53
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.73 E-value=2.6e-17 Score=123.00 Aligned_cols=97 Identities=18% Similarity=0.347 Sum_probs=83.2
Q ss_pred eEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCCCCCCcccEEEEE
Q 025454 102 VMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIPNYPDRNLPTVLVY 177 (252)
Q Consensus 102 v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~~~i~~lPTlliy 177 (252)
|.+++.++|...+ +.+ +++||+||++||++|+.+.|.|.++++.|++ +.|+.|+.+. +...|++.++||+++|
T Consensus 2 v~~l~~~~~~~~~-~~~--~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 2 TMTLTDANFQQAI-QGD--GPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp CEEECTTTHHHHH-SSS--SCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceeccHHhHHHHH-hCC--CcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 6789999999544 333 6899999999999999999999999999986 9999999875 3578999999999999
Q ss_pred ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 178 NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 178 ~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
++|+.+.++.|.. +.+.|..+|.+
T Consensus 79 ~~G~~~~~~~G~~------~~~~l~~~l~~ 102 (105)
T 1nsw_A 79 KGGRPVKQLIGYQ------PKEQLEAQLAD 102 (105)
T ss_dssp ETTEEEEEEESCC------CHHHHHHHTTT
T ss_pred eCCeEEEEEecCC------CHHHHHHHHHH
Confidence 9999999998863 46778777764
No 54
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.73 E-value=2e-17 Score=126.68 Aligned_cols=102 Identities=17% Similarity=0.294 Sum_probs=88.1
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccC---CCCCCCCCcccEE
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTD---CIPNYPDRNLPTV 174 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~---~~~~~~i~~lPTl 174 (252)
-+.|..++..+|...+.+.+ +++||+||++||++|+.+.|.|.+++.+|+ .+.|+.|+.+. +...|+|.++||+
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~--~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~ 88 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSN--KPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTL 88 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCS--SCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cccceecCHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEE
Confidence 34789999999999887543 689999999999999999999999999997 49999999875 3578999999999
Q ss_pred EEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 175 LVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 175 liy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
++|++|+.+.++.|.. +.+.|..+|.+.
T Consensus 89 ~~~~~g~~~~~~~G~~------~~~~l~~~l~~~ 116 (121)
T 2i1u_A 89 ILFKDGQPVKRIVGAK------GKAALLRELSDV 116 (121)
T ss_dssp EEEETTEEEEEEESCC------CHHHHHHHTCSC
T ss_pred EEEECCEEEEEecCCC------CHHHHHHHHHHH
Confidence 9999999999998863 567888887653
No 55
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.73 E-value=3.3e-17 Score=126.41 Aligned_cols=99 Identities=25% Similarity=0.315 Sum_probs=85.7
Q ss_pred ceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccC---CCCCCCCCcccEEEE
Q 025454 101 SVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTD---CIPNYPDRNLPTVLV 176 (252)
Q Consensus 101 ~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~---~~~~~~i~~lPTlli 176 (252)
.+..++.++|.+.+.+.+ +++||.||++||++|+.+.|.|.+++.+|. .+.|+.|+.+. +...|+|.++||+++
T Consensus 14 ~~~~~~~~~f~~~v~~~~--k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~ 91 (119)
T 1w4v_A 14 TFNIQDGPDFQDRVVNSE--TPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLA 91 (119)
T ss_dssp EEECCSHHHHHHHTTTCS--SCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEEEE
T ss_pred EEEecChhhHHHHHHcCC--CcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEEEE
Confidence 466679999999887643 689999999999999999999999999995 59999999875 357899999999999
Q ss_pred EECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 177 YNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 177 y~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|++|+.+.++.|. .+.+.|..+|.+
T Consensus 92 ~~~G~~~~~~~G~------~~~~~l~~~l~~ 116 (119)
T 1w4v_A 92 MKNGDVVDKFVGI------KDEDQLEAFLKK 116 (119)
T ss_dssp EETTEEEEEEESC------CCHHHHHHHHHH
T ss_pred EeCCcEEEEEcCC------CCHHHHHHHHHH
Confidence 9999999998886 356788888765
No 56
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.2e-17 Score=128.49 Aligned_cols=101 Identities=19% Similarity=0.249 Sum_probs=86.6
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-----CceEEEEeccCC---CCCCCCCc
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-----ATKFVKIISTDC---IPNYPDRN 170 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-----~vkFvkI~~~~~---~~~~~i~~ 170 (252)
-+.|..++..+|...+.+.+ ++|||+||++||++|+.+.|.|.+++.+|. .+.|++|+.+.. ...|+|.+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~--~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~ 83 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSE--DVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRG 83 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSS--SEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCS
T ss_pred CCcCEEcCHhhHHHHHhcCC--CeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCe
Confidence 45689999999999886543 699999999999999999999999999985 599999998753 47899999
Q ss_pred ccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 171 LPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 171 lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+||+++|++|+.+.++.|. .+.+.|..+|.+
T Consensus 84 ~Pt~~~~~~g~~~~~~~G~------~~~~~l~~~l~~ 114 (133)
T 1x5d_A 84 FPTIKIFQKGESPVDYDGG------RTRSDIVSRALD 114 (133)
T ss_dssp SSEEEEEETTEEEEEECSC------CSHHHHHHHHHH
T ss_pred eCeEEEEeCCCceEEecCC------CCHHHHHHHHHH
Confidence 9999999999998888875 356777777765
No 57
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.73 E-value=3.1e-17 Score=131.04 Aligned_cols=101 Identities=18% Similarity=0.272 Sum_probs=88.2
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccCC---CCCCCCCcccEE
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTDC---IPNYPDRNLPTV 174 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~~---~~~~~i~~lPTl 174 (252)
-|.+..++.++|...+. ++++|||+||++||++|+.+.|.|.+++.+|. .+.|++|+.+.. ...|+|.++||+
T Consensus 37 ~~~v~~l~~~~~~~~~~---~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 113 (148)
T 3p2a_A 37 DGEVINATAETLDKLLQ---DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTI 113 (148)
T ss_dssp CCCCEECCTTTHHHHTT---CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cCCceecCHHHHHHHHh---cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEE
Confidence 45799999999999883 34799999999999999999999999999995 599999998753 588999999999
Q ss_pred EEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 175 LVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 175 liy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
++|++|+.+.++.|. .+.+.|..+|.+.
T Consensus 114 ~~~~~G~~~~~~~G~------~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 114 MLYRNGKMIDMLNGA------VPKAPFDNWLDEQ 141 (148)
T ss_dssp EEEETTEEEEEESSC------CCHHHHHHHHHHH
T ss_pred EEEECCeEEEEEeCC------CCHHHHHHHHHHH
Confidence 999999999999886 4578888888763
No 58
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.72 E-value=3.4e-17 Score=126.55 Aligned_cols=101 Identities=15% Similarity=0.250 Sum_probs=87.2
Q ss_pred ceEEc--ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEEE
Q 025454 101 SVMPI--SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTVL 175 (252)
Q Consensus 101 ~v~eI--s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTll 175 (252)
.|..+ +..+|.+.+.+.+ ++|||.||++||++|+.+.|.|.+++.+|+.+.|++|+.+. +...|+|.++||++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~--~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~ 81 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAP--GLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGVSSIPALF 81 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCS--SCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cceEecCCHHHHHHHHHhCC--CEEEEEEECCCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 46777 6788987776643 68999999999999999999999999999889999999875 35889999999999
Q ss_pred EEEC----CeEEEEeecccccCCCCCHHHHHHHHHhcCC
Q 025454 176 VYNN----GAVKANYVGLRSFGRRCTPEGVALVLCQSDP 210 (252)
Q Consensus 176 iy~~----G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g~ 210 (252)
+|++ |+.+.+++|.. ..+|+.++.++..
T Consensus 82 ~~~~~~~~G~~~~~~~G~~-------~~~l~~~~~~~~~ 113 (118)
T 2f51_A 82 FVKKEGNEIKTLDQFVGAD-------VSRIKADIEKFKH 113 (118)
T ss_dssp EEEEETTEEEEEEEEESCC-------HHHHHHHHHHHC-
T ss_pred EEeCCCCcceEEEeecCCC-------HHHHHHHHHHhhh
Confidence 9999 99999999964 5679998888653
No 59
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.72 E-value=2.9e-17 Score=129.68 Aligned_cols=103 Identities=19% Similarity=0.307 Sum_probs=88.5
Q ss_pred CCceEEcChhhHHHHHHcCC---------CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCC
Q 025454 99 FGSVMPISGSDFVREVSQAP---------PDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIPN 165 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~---------~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~ 165 (252)
-+.|..++.++|.+.|.+.+ .+++|||.||++||++|+.+.|.|.+++.+|++ +.|+.|+.+. +...
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~ 87 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGA 87 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence 46799999999999997532 357999999999999999999999999999974 9999999875 3578
Q ss_pred CCCCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 166 YPDRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 166 ~~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|+|.++||+++| ++|+.+ ++.|. .+.+.|+.+|.+.
T Consensus 88 ~~v~~~Pt~~~~~~~G~~~-~~~G~------~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 88 FGIRSIPSILFIPMEGKPE-MAQGA------MPKASFKKAIDEF 124 (136)
T ss_dssp TTCCSSCEEEEECSSSCCE-EEESC------CCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCcEE-EEeCC------CCHHHHHHHHHHH
Confidence 999999999999 899987 66664 4678899888864
No 60
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.72 E-value=3.1e-17 Score=129.41 Aligned_cols=104 Identities=16% Similarity=0.300 Sum_probs=87.3
Q ss_pred CCCceEEcChhhHHHHHHcCC---------CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCC
Q 025454 98 RFGSVMPISGSDFVREVSQAP---------PDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIP 164 (252)
Q Consensus 98 ~fG~v~eIs~~~f~~~V~~~~---------~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~ 164 (252)
.-+.|..++..+|...|.+.. ++++|||+||++||++|+.+.|.|.+++..|++ +.|+.|+.+. +..
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 99 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELAR 99 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHH
Confidence 345799999999999998743 357999999999999999999999999999984 9999999875 358
Q ss_pred CCCCCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 165 NYPDRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 165 ~~~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
.|+|.++||+++| ++|+.+ ++.|. .+.+.|..+|.+.
T Consensus 100 ~~~v~~~Pt~~~~~~~g~~~-~~~G~------~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 100 DFGIQSIPTIWFVPMKGEPQ-VNMGA------LSKEQLKGYIDKV 137 (141)
T ss_dssp HTTCCSSSEEEEECSSSCCE-EEESC------CCHHHHHHHHHHT
T ss_pred HcCCCCcCEEEEEeCCCCEE-EEeCC------CCHHHHHHHHHHH
Confidence 9999999999999 567766 77775 4678898888764
No 61
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.71 E-value=1.9e-17 Score=129.30 Aligned_cols=100 Identities=24% Similarity=0.424 Sum_probs=82.9
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCc--------------hhhhHHHHHHHHHHHCC-CceEEEEeccC---
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFA--------------ECGLLMQCLEELARKYP-ATKFVKIISTD--- 161 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~--------------~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~--- 161 (252)
+.|.+++.++|...+.+. +++|||.||++||+ +|+.+.|.|.+++++|+ .+.|++|+.+.
T Consensus 3 ~~v~~l~~~~f~~~~~~~--~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~ 80 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKA--DGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG 80 (123)
T ss_dssp CSCEECCSTTHHHHTTSC--SSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTT
T ss_pred CccEecChhhHHHHHHhC--CCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHH
Confidence 468899999999888644 47999999999999 99999999999999997 49999999864
Q ss_pred CCCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 162 CIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 162 ~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+...|+|.++||+++|++|+.+.++.|.. +.++|..+|.+
T Consensus 81 l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~------~~~~l~~~l~~ 120 (123)
T 1oaz_A 81 TAPKYGIRGIPTLLLFKNGEVAATKVGAL------SKGQLKEFLDA 120 (123)
T ss_dssp TGGGGTCCBSSEEEEEESSSEEEEEESCC------CHHHHHHHHTT
T ss_pred HHHHcCCCccCEEEEEECCEEEEEEeCCC------CHHHHHHHHHH
Confidence 45899999999999999999999999863 57888888875
No 62
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=1.4e-17 Score=131.47 Aligned_cols=93 Identities=16% Similarity=0.246 Sum_probs=82.0
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC--CceEEEEeccCC---CCCCCCC----
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP--ATKFVKIISTDC---IPNYPDR---- 169 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~~---~~~~~i~---- 169 (252)
-+.|..++.++|...+.+. ++++|||+||++||++|+.+.|.|.+++.+|. .+.|++|+.+.. ..+|+|.
T Consensus 6 ~~~v~~l~~~~f~~~~~~~-~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERD-KRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPL 84 (137)
T ss_dssp CSCCEECCTTHHHHHHHHS-TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSS
T ss_pred CceEEEccHhhHHHHHhcC-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCC
Confidence 3568999999999999765 45699999999999999999999999999996 599999998753 4789998
Q ss_pred --cccEEEEEECCeEEEEeeccccc
Q 025454 170 --NLPTVLVYNNGAVKANYVGLRSF 192 (252)
Q Consensus 170 --~lPTlliy~~G~~v~~~vG~~~~ 192 (252)
++||+++|++|+.+.++.|....
T Consensus 85 ~~~~Pt~~~~~~G~~~~~~~G~~~~ 109 (137)
T 2dj0_A 85 TKQLPTLILFQGGKEAMRRPQIDKK 109 (137)
T ss_dssp SSCSSEEEEESSSSEEEEESCBCSS
T ss_pred cCCCCEEEEEECCEEEEEecCcCch
Confidence 99999999999999999987653
No 63
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.70 E-value=2.3e-16 Score=126.53 Aligned_cols=105 Identities=13% Similarity=0.045 Sum_probs=80.8
Q ss_pred eEEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccC---CCCCCCCCcccEEEE
Q 025454 102 VMPI-SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTD---CIPNYPDRNLPTVLV 176 (252)
Q Consensus 102 v~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~---~~~~~~i~~lPTlli 176 (252)
+..| +.++|...+.+. .+++|||+|||+||++|+.+.|.|.+++++|. .+.|++||.+. +...|+|.++||+++
T Consensus 5 l~~i~~~~~~~~~v~~~-~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~ 83 (142)
T 1qgv_A 5 LPHLHNGWQVDQAILSE-EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMF 83 (142)
T ss_dssp SCBCCSHHHHHHHHHTC-SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEE
T ss_pred HhccCCHHHHHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEE
Confidence 4455 578898888753 24799999999999999999999999999995 59999999864 568999999999999
Q ss_pred EECCeEEEEeecccc---c-CCCCCHHHHHHHHHh
Q 025454 177 YNNGAVKANYVGLRS---F-GRRCTPEGVALVLCQ 207 (252)
Q Consensus 177 y~~G~~v~~~vG~~~---~-G~~~~~e~lE~~L~~ 207 (252)
|++|+.+....|... + |..-+.++|..+|.+
T Consensus 84 ~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~ 118 (142)
T 1qgv_A 84 FFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIET 118 (142)
T ss_dssp EETTEEEEEECC------CCSCCSCHHHHHHHHHH
T ss_pred EECCcEEEEecCCCCcceeeeecCcHHHHHHHHHH
Confidence 999999986665321 1 322235555555543
No 64
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=5.3e-17 Score=127.74 Aligned_cols=99 Identities=18% Similarity=0.261 Sum_probs=84.7
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC----ceEEEEeccC---CCCCCCCCccc
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA----TKFVKIISTD---CIPNYPDRNLP 172 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~----vkFvkI~~~~---~~~~~~i~~lP 172 (252)
+.|..++..+|...+.+ +++|||+||++||++|+.+.|.|.+++.+|.+ +.|++|+.+. +...|+|.++|
T Consensus 17 ~~v~~l~~~~~~~~~~~---~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 93 (140)
T 2dj1_A 17 NGVWVLNDGNFDNFVAD---KDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYP 93 (140)
T ss_dssp TTEEECCTTTHHHHHTT---CSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSS
T ss_pred CCCEEcChHhHHHHHhc---CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccC
Confidence 46899999999998854 36999999999999999999999999998754 9999999875 35789999999
Q ss_pred EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 173 TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 173 Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|+++|++|+ +.++.|. .+.+.|..+|.+.
T Consensus 94 t~~~~~~G~-~~~~~g~------~~~~~l~~~l~~~ 122 (140)
T 2dj1_A 94 TIKILKKGQ-AVDYDGS------RTQEEIVAKVREV 122 (140)
T ss_dssp EEEEEETTE-EEECCSC------CCHHHHHHHHHHH
T ss_pred eEEEEECCc-EEEcCCC------CCHHHHHHHHHHh
Confidence 999999999 6667664 4678888888764
No 65
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.70 E-value=5.1e-17 Score=123.38 Aligned_cols=100 Identities=19% Similarity=0.320 Sum_probs=85.8
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC----CceEEEEeccC---CCCCCCCCccc
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP----ATKFVKIISTD---CIPNYPDRNLP 172 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~----~vkFvkI~~~~---~~~~~~i~~lP 172 (252)
+.|..++.++|...+.+. ++|||+||++||++|+.+.|.|.+++..|. .+.|++|+.+. +...|++.++|
T Consensus 7 ~~v~~l~~~~~~~~~~~~---~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 83 (120)
T 1mek_A 7 DHVLVLRKSNFAEALAAH---KYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYP 83 (120)
T ss_dssp TTEEECCTTTHHHHHHHC---SEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSS
T ss_pred CCcEEechhhHHHHHccC---CeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCccc
Confidence 468999999999888653 589999999999999999999999999885 59999999864 45789999999
Q ss_pred EEEEEECCeEE--EEeecccccCCCCCHHHHHHHHHhc
Q 025454 173 TVLVYNNGAVK--ANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 173 Tlliy~~G~~v--~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|+++|++|+.+ .++.|. .+.+.|..+|.+.
T Consensus 84 t~~~~~~g~~~~~~~~~g~------~~~~~l~~~l~~~ 115 (120)
T 1mek_A 84 TIKFFRNGDTASPKEYTAG------READDIVNWLKKR 115 (120)
T ss_dssp EEEEEESSCSSSCEECCCC------SSHHHHHHHHHTT
T ss_pred EEEEEeCCCcCCcccccCc------cCHHHHHHHHHhc
Confidence 99999999877 677664 4578899988764
No 66
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.70 E-value=4.8e-17 Score=128.55 Aligned_cols=101 Identities=12% Similarity=0.109 Sum_probs=84.2
Q ss_pred CCceEEcCh-hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEE
Q 025454 99 FGSVMPISG-SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTV 174 (252)
Q Consensus 99 fG~v~eIs~-~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTl 174 (252)
.+.|.+|+. ++|...+. ..++++|||.||++||++|+.+.|.|.+++..| .+.|++|+.+. +...|+|.++||+
T Consensus 19 ~~~v~~l~~~~~~~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 96 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFS-STQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-YVTLVDIDVDIHPKLNDQHNIKALPTF 96 (133)
T ss_dssp TEEEEECCCTTHHHHHHT-C-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-ECEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CccEEEecChhHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-CEEEEEEeccchHHHHHhcCCCCCCEE
Confidence 456888865 77766664 445689999999999999999999999999988 79999999875 3478999999999
Q ss_pred EEEE--CCe--EEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 175 LVYN--NGA--VKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 175 liy~--~G~--~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
++|+ +|+ .+.++.|. +.++|..+|.+.
T Consensus 97 ~~~~~~~g~g~~~~~~~G~-------~~~~l~~~l~~~ 127 (133)
T 3cxg_A 97 EFYFNLNNEWVLVHTVEGA-------NQNDIEKAFQKY 127 (133)
T ss_dssp EEEEEETTEEEEEEEEESC-------CHHHHHHHHHHH
T ss_pred EEEEecCCCeEEEEEEcCC-------CHHHHHHHHHHH
Confidence 9998 998 88888875 367888888764
No 67
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=4.3e-17 Score=126.71 Aligned_cols=100 Identities=21% Similarity=0.254 Sum_probs=84.2
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCCCCCCcccEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~~~i~~lPTll 175 (252)
+.|..++.++|...+.+. +++|||+||++||++|+.+.|.|.+++.+|++ +.|++|+.+. +...|+|.++||++
T Consensus 17 ~~v~~l~~~~f~~~~~~~--~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 94 (130)
T 2dml_A 17 DDVIELTPSNFNREVIQS--DGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIK 94 (130)
T ss_dssp SSSEECCTTTHHHHTTTC--SSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEE
T ss_pred CCcEECCHHHHHHHHhcC--CCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEE
Confidence 468999999999988654 36999999999999999999999999999987 9999999875 35789999999999
Q ss_pred EEECCeE-EEEeecccccCCCCCHHHHHHHHHh
Q 025454 176 VYNNGAV-KANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 176 iy~~G~~-v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+|++|.. +.++.|. .+.+.|..+|.+
T Consensus 95 ~~~~~~~~~~~~~G~------~~~~~l~~~l~~ 121 (130)
T 2dml_A 95 IFGANKNKPEDYQGG------RTGEAIVDAALS 121 (130)
T ss_dssp EESSCTTSCEECCSC------CSHHHHHHHHHH
T ss_pred EEeCCCCeEEEeecC------CCHHHHHHHHHH
Confidence 9998765 6677664 346667666654
No 68
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.69 E-value=3.6e-17 Score=125.84 Aligned_cols=105 Identities=16% Similarity=0.162 Sum_probs=86.7
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccC---CCCCCCCCcccEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTD---CIPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~---~~~~~~i~~lPTll 175 (252)
+.|..++.++|...+.+.+ ++|||+||++||++|+.+.|.|.+++.+|+ .+.|++|+.+. +...|+|.++||++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~--~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 80 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGK--THWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVK 80 (122)
T ss_dssp CCSEECCHHHHHHHTTTCS--SCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cchhcCCHHHHHHHHhcCC--CeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEE
Confidence 3588999999988776543 689999999999999999999999999998 59999999875 35789999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+|.+|..+.++.|.. +| ..+.+.|..+|.+.
T Consensus 81 ~~~~~~~~~~~~g~~-~~-~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 81 LYQYERAKKSIWEEQ-IN-SRDAKTIAALIYGK 111 (122)
T ss_dssp EEEEEGGGTEEEEEE-EC-CSCHHHHHHHHHHH
T ss_pred EEeCCCccceeeccc-cC-cCCHHHHHHHHHHH
Confidence 998876677777752 11 24678888888753
No 69
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.69 E-value=1.3e-16 Score=123.58 Aligned_cols=102 Identities=22% Similarity=0.299 Sum_probs=86.9
Q ss_pred cCCCceEEcC-hhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC---CCCCCCCCc
Q 025454 97 SRFGSVMPIS-GSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD---CIPNYPDRN 170 (252)
Q Consensus 97 ~~fG~v~eIs-~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~---~~~~~~i~~ 170 (252)
+..+.+..|+ .++|.+.+ + ++++|||.||++||++|+.+.|.|.+++.+|++ +.|+.|+.+. +...|++.+
T Consensus 12 ~~~~~~~~i~~~~~f~~~l-~--~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~ 88 (121)
T 2j23_A 12 VPRGSVQVISSYDQFKQVT-G--GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRA 88 (121)
T ss_dssp CCCCCEEECCSHHHHHHHH-S--SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCS
T ss_pred cCCcceEEcCCHHHHHHHH-c--CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCc
Confidence 3456788884 58888888 2 346899999999999999999999999999987 9999999875 357899999
Q ss_pred ccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 171 LPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 171 lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+||+++|++|+.+.++.|. +.+.|..+|.+.
T Consensus 89 ~Pt~~~~~~G~~~~~~~G~-------~~~~l~~~l~~~ 119 (121)
T 2j23_A 89 MPTFVFFKNGQKIDTVVGA-------DPSKLQAAITQH 119 (121)
T ss_dssp SSEEEEEETTEEEEEEESS-------CHHHHHHHHHHH
T ss_pred ccEEEEEECCeEEeeEcCC-------CHHHHHHHHHHh
Confidence 9999999999999998874 468888888763
No 70
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=1.4e-16 Score=123.51 Aligned_cols=99 Identities=17% Similarity=0.187 Sum_probs=83.9
Q ss_pred CCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC---CCCCCCCCccc
Q 025454 98 RFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP--ATKFVKIISTD---CIPNYPDRNLP 172 (252)
Q Consensus 98 ~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~---~~~~~~i~~lP 172 (252)
..+.|+.++.++|.+.+. . .|||+||++||++|+.+.|.|.+++++|+ .+.|+.|+.+. +...|+|.++|
T Consensus 5 ~~~~v~~l~~~~f~~~~~-~----~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 79 (126)
T 1x5e_A 5 SSGNVRVITDENWRELLE-G----DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALP 79 (126)
T ss_dssp CCCSEEECCTTTHHHHTS-S----EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CCCccEEecHHHHHHHhC-C----CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccC
Confidence 356799999999997653 2 39999999999999999999999999987 59999999875 35789999999
Q ss_pred EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 173 TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 173 Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|+++|++|+ +.++.|. .+.+.|..+|.+.
T Consensus 80 t~~~~~~G~-~~~~~G~------~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 80 TIYHCKDGE-FRRYQGP------RTKKDFINFISDK 108 (126)
T ss_dssp EEEEEETTE-EEECCSC------CCHHHHHHHHHTC
T ss_pred EEEEEeCCe-EEEeecC------CCHHHHHHHHHHH
Confidence 999999998 4667664 4678899998864
No 71
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.67 E-value=4.5e-17 Score=131.30 Aligned_cols=99 Identities=16% Similarity=0.208 Sum_probs=70.8
Q ss_pred ceEEcChhhHHHHHHcCCCCceEEEEEEcCC--CchhhhHHHHHHHHHHHCCCce--EEEEeccC---CCCCCCCCcccE
Q 025454 101 SVMPISGSDFVREVSQAPPDVWVVVILYKDG--FAECGLLMQCLEELARKYPATK--FVKIISTD---CIPNYPDRNLPT 173 (252)
Q Consensus 101 ~v~eIs~~~f~~~V~~~~~~~~VVV~fya~w--c~~Ck~l~~~l~~LA~ky~~vk--FvkI~~~~---~~~~~~i~~lPT 173 (252)
.+..++.++|.+.+.+++ .+||.||++| |++|+.|.|.|++|+++|+.++ |++||.+. +..+|+|+++||
T Consensus 18 ~~~~l~~~~f~~~i~~~~---~~vv~f~~~~~~C~~C~~l~P~l~~la~~~~~v~~~~~~Vd~d~~~~la~~~~V~~iPT 94 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVG---DGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNVRRFPA 94 (142)
T ss_dssp TCEECCCC--------CC---SEEEEECCCSCC----CCHHHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTCCSSSE
T ss_pred cCcccccccHHHHHHhCC---CEEEEEECCCCCCccHHHHHHHHHHHHHHhcccceeEEEEECCCCHHHHHhcCCCcCCe
Confidence 478899999999987553 5888999887 9999999999999999996699 99999864 568899999999
Q ss_pred EEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 174 VLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 174 lliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+++|++|+.+.+++|.. +.+.|..+|.+.
T Consensus 95 ~~~fk~G~~v~~~~G~~------~~~~l~~~i~~~ 123 (142)
T 2es7_A 95 TLVFTDGKLRGALSGIH------PWAELLTLMRSI 123 (142)
T ss_dssp EEEESCC----CEESCC------CHHHHHHHHHHH
T ss_pred EEEEeCCEEEEEEeCCC------CHHHHHHHHHHH
Confidence 99999999999999863 467788888764
No 72
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.67 E-value=8.2e-17 Score=123.44 Aligned_cols=102 Identities=23% Similarity=0.335 Sum_probs=83.7
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC------CceEEEEeccCC-CCCCCCCcc
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP------ATKFVKIISTDC-IPNYPDRNL 171 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~------~vkFvkI~~~~~-~~~~~i~~l 171 (252)
-+.|..++.++|...+... +++|||+||++||++|+.+.|.|.+++++|+ .+.|++|+.+.. ... +|.++
T Consensus 6 ~~~v~~l~~~~f~~~v~~~--~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~-~v~~~ 82 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIVLDD--TKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD-EIQGF 82 (121)
T ss_dssp SCSSEECCTTTTTTSSSCT--TSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS-CCSSS
T ss_pred CCCeEEecccCHHHHhhcC--CCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc-ccCcC
Confidence 3578999999999887443 4799999999999999999999999999987 499999998642 233 99999
Q ss_pred cEEEEEECCeE--EEEeecccccCCCCCHHHHHHHHHhcC
Q 025454 172 PTVLVYNNGAV--KANYVGLRSFGRRCTPEGVALVLCQSD 209 (252)
Q Consensus 172 PTlliy~~G~~--v~~~vG~~~~G~~~~~e~lE~~L~~~g 209 (252)
||+++|++|.. +.++.|. .+.+.|..+|.+..
T Consensus 83 Pt~~~~~~~~~~~~~~~~G~------~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 83 PTIKLYPAGAKGQPVTYSGS------RTVEDLIKFIAENG 116 (121)
T ss_dssp SEEEEECSSCTTSCCCCCCC------SCHHHHHHHHHHTS
T ss_pred CeEEEEeCcCCCCceEecCC------CCHHHHHHHHHhcc
Confidence 99999998854 5566653 46789999998753
No 73
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.67 E-value=9.5e-17 Score=134.56 Aligned_cols=108 Identities=9% Similarity=0.168 Sum_probs=85.1
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEc-------CCCchhhhHHHHHHHHHHHCC------CceEEEEeccCC---C
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYK-------DGFAECGLLMQCLEELARKYP------ATKFVKIISTDC---I 163 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya-------~wc~~Ck~l~~~l~~LA~ky~------~vkFvkI~~~~~---~ 163 (252)
..|++|+.++|.+.|. .+++.+|||.||| +||++|+.|.|.|++||+.|. .++|++||.++. .
T Consensus 18 ~~vi~lt~~nF~~~v~-~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 18 TGVITVTADNYPLLSR-GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TSEEECCTTTHHHHTT-CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred CCCEECCHHHHHHHHc-ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 4699999999998775 3346799999999 499999999999999999874 499999998754 5
Q ss_pred CCCCCCcccEEEEEECCeEEE----Eeec--ccc--c--CCCCCHHHHHHHHHhc
Q 025454 164 PNYPDRNLPTVLVYNNGAVKA----NYVG--LRS--F--GRRCTPEGVALVLCQS 208 (252)
Q Consensus 164 ~~~~i~~lPTlliy~~G~~v~----~~vG--~~~--~--G~~~~~e~lE~~L~~~ 208 (252)
.+|+|+++|||++|++|.... .+.. ... + |...+.+.|..||.+.
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~ 151 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKI 151 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHh
Confidence 899999999999999996433 0000 001 1 2357889999999764
No 74
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.67 E-value=2.3e-16 Score=121.08 Aligned_cols=97 Identities=7% Similarity=0.067 Sum_probs=79.2
Q ss_pred ceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEecc-------CCCCCCCCCccc
Q 025454 101 SVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIIST-------DCIPNYPDRNLP 172 (252)
Q Consensus 101 ~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~-------~~~~~~~i~~lP 172 (252)
.+..++.++|...+.+. +++||+||++||++|+.+.|.|.+++.+++. +.|+.++.. .+...|+|.++|
T Consensus 13 ~~~~~~~~~~~~~~~~~---~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~P 89 (118)
T 1zma_A 13 DLEVTTVVRAQEALDKK---ETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVP 89 (118)
T ss_dssp TSEECCHHHHHHHHHTT---CCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSC
T ss_pred hhhcCCHHHHHHHHhCC---CeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCC
Confidence 57889999999988643 5899999999999999999999999998863 555544321 234789999999
Q ss_pred EEEEEECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 173 TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 173 Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
|+++|++|+.+.++.|. .+.+.|..+|.
T Consensus 90 t~~~~~~G~~~~~~~G~------~~~~~l~~~l~ 117 (118)
T 1zma_A 90 GFVHITDGQINVRCDSS------MSAQEIKDFAG 117 (118)
T ss_dssp EEEEEETTEEEEECCTT------CCHHHHHHHHT
T ss_pred eEEEEECCEEEEEecCC------CCHHHHHHHhh
Confidence 99999999999988875 35778888774
No 75
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.67 E-value=1.6e-16 Score=123.96 Aligned_cols=83 Identities=12% Similarity=0.275 Sum_probs=73.9
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccC---CCCCCCCCcccEEEEEECCeEEEEeecccccCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTD---CIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGR 194 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~---~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~ 194 (252)
++++|||+||++||++|+.+.|.|.+++++|+ .+.|+.|+.+. +..+|+|.++||+++|++|+.+.++.|.
T Consensus 41 ~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~----- 115 (128)
T 3ul3_B 41 KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTMLARKDHF----- 115 (128)
T ss_dssp CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEEEEESSC-----
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEEEEecCC-----
Confidence 34799999999999999999999999999997 59999999875 3588999999999999999999999885
Q ss_pred CCCHHHHHHHHHh
Q 025454 195 RCTPEGVALVLCQ 207 (252)
Q Consensus 195 ~~~~e~lE~~L~~ 207 (252)
.+.++|..+|.+
T Consensus 116 -~~~~~l~~~l~~ 127 (128)
T 3ul3_B 116 -VSSNDLIALIKK 127 (128)
T ss_dssp -CCHHHHHHHHTT
T ss_pred -CCHHHHHHHHHh
Confidence 467888888865
No 76
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.66 E-value=6.5e-17 Score=126.17 Aligned_cols=104 Identities=20% Similarity=0.263 Sum_probs=85.0
Q ss_pred CCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC---CceEEEEeccC---CCCCCCCCcc
Q 025454 98 RFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP---ATKFVKIISTD---CIPNYPDRNL 171 (252)
Q Consensus 98 ~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~---~vkFvkI~~~~---~~~~~~i~~l 171 (252)
.-+.|..++..+|...+.+. +++|||+||++||++|+.+.|.|.+++.+|. .+.|++|+.+. +...|+|.++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~--~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~ 82 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDP--KKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGF 82 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCT--TSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSS
T ss_pred CCCceEEEcCCCHHHHhccC--CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcC
Confidence 35689999999999888653 4799999999999999999999999999985 59999999863 4578999999
Q ss_pred cEEEEEECCeEEEE--eecccccCCCCCHHHHHHHHHhc
Q 025454 172 PTVLVYNNGAVKAN--YVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 172 PTlliy~~G~~v~~--~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
||+++|.+|..+.. +. |...+.+.|..+|.+.
T Consensus 83 Pt~~~~~~g~~~~~~~~~-----gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 83 PTIYFAPSGDKKNPIKFE-----GGNRDLEHLSKFIDEH 116 (133)
T ss_dssp SEEEEECTTCTTSCEECC-----SSCCSTTHHHHHHHHH
T ss_pred CEEEEEeCCCcccceEec-----CCCcCHHHHHHHHHHh
Confidence 99999999865432 22 2335667888888875
No 77
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.65 E-value=5.7e-16 Score=131.16 Aligned_cols=100 Identities=16% Similarity=0.271 Sum_probs=87.3
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCCCCCCcccEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIPNYPDRNLPTVL 175 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~~~i~~lPTll 175 (252)
+.|..++..+|...+.+. ++|||+||++||++|+.+.|.|.+++.+|++ +.|++|+++. +...|+|.++||++
T Consensus 97 ~~v~~l~~~~f~~~~~~~---~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 173 (210)
T 3apq_A 97 PEIITLERREFDAAVNSG---ELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLF 173 (210)
T ss_dssp TTSEECCHHHHHHHHHHS---CCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CceEEecHHHHHHHHccC---CcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEE
Confidence 358899999999999543 5899999999999999999999999999976 9999999875 35789999999999
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+|++|+.+.++.|. .+.+.|..+|.+.
T Consensus 174 ~~~~G~~~~~~~G~------~~~~~l~~~i~~~ 200 (210)
T 3apq_A 174 IFRSGMAAVKYNGD------RSKESLVAFAMQH 200 (210)
T ss_dssp EECTTSCCEECCSC------CCHHHHHHHHHHH
T ss_pred EEECCCceeEecCC------CCHHHHHHHHHHh
Confidence 99999999888875 4578888888763
No 78
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.64 E-value=8.3e-16 Score=119.48 Aligned_cols=97 Identities=11% Similarity=0.080 Sum_probs=80.7
Q ss_pred CceEEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC-------CCCCCCC-c
Q 025454 100 GSVMPI-SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC-------IPNYPDR-N 170 (252)
Q Consensus 100 G~v~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~-------~~~~~i~-~ 170 (252)
|.+..| |.++|.+.+.+. ++|||+|+|.|||+|+.+.|.|++++.. ++++|++|+.++. +..|+|+ .
T Consensus 6 ~~~~~i~s~e~f~~ii~~~---~~vvi~khatwCgpc~~~~~~~e~~~~~-~~v~~~~vdVde~r~~Sn~IA~~~~V~h~ 81 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIEEN---KYVFVLKHSETCPISANAYDQFNKFLYE-RDMDGYYLIVQQERDLSDYIAKKTNVKHE 81 (112)
T ss_dssp GCEEECCSHHHHHHHHHHC---SEEEEEEECTTCHHHHHHHHHHHHHHHH-HTCCEEEEEGGGGHHHHHHHHHHHTCCCC
T ss_pred cceeecCCHHHHHHHHhcC---CCEEEEEECCcCHhHHHHHHHHHHHhcc-CCceEEEEEeecCchhhHHHHHHhCCccC
Confidence 568888 567888877653 6999999999999999999999999987 8899999998754 5899999 4
Q ss_pred ccEEEEEECCeEEEEeecccccCCCCCHHHHHHHH
Q 025454 171 LPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVL 205 (252)
Q Consensus 171 lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L 205 (252)
.||+++|+||+.+.+..-- .++.+.|+..|
T Consensus 82 sPq~il~k~G~~v~~~SH~-----~I~~~~l~~~~ 111 (112)
T 3iv4_A 82 SPQAFYFVNGEMVWNRDHG-----DINVSSLAQAE 111 (112)
T ss_dssp SSEEEEEETTEEEEEEEGG-----GCSHHHHHHHT
T ss_pred CCeEEEEECCEEEEEeecc-----ccCHHHHHHhh
Confidence 9999999999999875432 46677776554
No 79
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.64 E-value=1.2e-15 Score=118.26 Aligned_cols=88 Identities=13% Similarity=0.131 Sum_probs=76.5
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHC-CCceEEEEe--cc---CCCCCCCCCcccEEEEEE-CCeEEEEeecccc
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKY-PATKFVKII--ST---DCIPNYPDRNLPTVLVYN-NGAVKANYVGLRS 191 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky-~~vkFvkI~--~~---~~~~~~~i~~lPTlliy~-~G~~v~~~vG~~~ 191 (252)
++++|||.||++||++|+.+.|.|.+++++| +++.|+.|+ .+ .+...|+|.++||+++|. +|+.+.++.|.
T Consensus 25 ~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~-- 102 (126)
T 2l57_A 25 EGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGL-- 102 (126)
T ss_dssp SSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESC--
T ss_pred CCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCC--
Confidence 4579999999999999999999999999999 579999999 65 346889999999999999 99999999885
Q ss_pred cCCCCCHHHHHHHHHhcCCCC
Q 025454 192 FGRRCTPEGVALVLCQSDPVL 212 (252)
Q Consensus 192 ~G~~~~~e~lE~~L~~~g~i~ 212 (252)
.+.+.|..+|.+...-.
T Consensus 103 ----~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 103 ----MRKNNIETILNSLGVKE 119 (126)
T ss_dssp ----CCHHHHHHHHHHHCCCC
T ss_pred ----CCHHHHHHHHHHHhccc
Confidence 45788999998864433
No 80
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.63 E-value=4.9e-16 Score=139.38 Aligned_cols=108 Identities=11% Similarity=0.164 Sum_probs=83.9
Q ss_pred cCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC-----CCCCCCCCc
Q 025454 97 SRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD-----CIPNYPDRN 170 (252)
Q Consensus 97 ~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~-----~~~~~~i~~ 170 (252)
..-+.|++|+..+|.+.|.+. +++|||.|||+||++|+.+.|.|.+++..|++ +.|+.|+++. ++..|+|.+
T Consensus 14 ~~~~~vv~lt~~~f~~~i~~~--~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~ 91 (298)
T 3ed3_A 14 DSDPHISELTPKSFDKAIHNT--NYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNG 91 (298)
T ss_dssp SSCTTCEECCHHHHHHHHTSS--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCB
T ss_pred CCCCCeEEeCHHHHHHHHHhC--CCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCc
Confidence 345679999999999999643 36899999999999999999999999999987 8999998762 358899999
Q ss_pred ccEEEEEECCeEEEEeec-----------cccc-CCCCCHHHHHHHHHh
Q 025454 171 LPTVLVYNNGAVKANYVG-----------LRSF-GRRCTPEGVALVLCQ 207 (252)
Q Consensus 171 lPTlliy~~G~~v~~~vG-----------~~~~-G~~~~~e~lE~~L~~ 207 (252)
+||+++|++|+.+.+..| ...+ |. .+.+.|..||.+
T Consensus 92 ~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~-r~~~~i~~fl~~ 139 (298)
T 3ed3_A 92 FPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGA-RTLAPIVDFSLS 139 (298)
T ss_dssp SSEEEEEECCCC-------------CCCEEEECCSC-CSHHHHHHHHHT
T ss_pred cceEEEEECCceeecccccccccccccccceeecCC-cCHHHHHHHHHH
Confidence 999999999987655555 2233 43 456777666654
No 81
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.62 E-value=1.1e-15 Score=144.19 Aligned_cols=101 Identities=19% Similarity=0.303 Sum_probs=86.4
Q ss_pred ceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCCCCCCcccEEEE
Q 025454 101 SVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIPNYPDRNLPTVLV 176 (252)
Q Consensus 101 ~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~~~i~~lPTlli 176 (252)
.|..++..+|.+.|.+.+.+.+|||+|||+||++|+.+.|.|.++|..+.+ +.|++||++. ++.+|+|+++||+++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~ 81 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKI 81 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEEE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEEE
Confidence 588999999999997665557999999999999999999999999999987 9999999875 458999999999999
Q ss_pred EECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 177 YNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 177 y~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|++|+.+.++.|.. +.+.|..+|.+
T Consensus 82 ~~~g~~~~~~~G~~------~~~~l~~~~~~ 106 (481)
T 3f8u_A 82 FRDGEEAGAYDGPR------TADGIVSHLKK 106 (481)
T ss_dssp EETTEEEEECCSCS------SHHHHHHHHHH
T ss_pred EeCCceeeeecCcc------CHHHHHHHHHh
Confidence 99999888888864 34445444443
No 82
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.42 E-value=3e-17 Score=121.81 Aligned_cols=98 Identities=28% Similarity=0.477 Sum_probs=82.3
Q ss_pred eEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEecc---CCCCCCCCCcccEEEEE
Q 025454 102 VMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIIST---DCIPNYPDRNLPTVLVY 177 (252)
Q Consensus 102 v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~---~~~~~~~i~~lPTlliy 177 (252)
|.+++.++|.+.+.+. ++++||.||++||++|+.+.|.|.+++..|+ .+.|+.|+.+ .+...|++.++||+++|
T Consensus 3 v~~l~~~~~~~~~~~~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKS--DKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLF 80 (106)
Confidence 6778899999888544 3689999999999999999999999999998 5999999876 35689999999999999
Q ss_pred ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 178 NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 178 ~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
++|+.+.++.|.. +.+.|..+|.+
T Consensus 81 ~~g~~~~~~~g~~------~~~~l~~~l~~ 104 (106)
T 2yj7_A 81 KNGQVVDRLVGAQ------PKEALKERIDK 104 (106)
Confidence 9999998888753 34566666543
No 83
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.62 E-value=5.9e-16 Score=122.01 Aligned_cols=100 Identities=18% Similarity=0.254 Sum_probs=84.1
Q ss_pred eEEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHH---HHHHHHCCCceEEEEeccC-------CCCCCCCCc
Q 025454 102 VMPI-SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCL---EELARKYPATKFVKIISTD-------CIPNYPDRN 170 (252)
Q Consensus 102 v~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l---~~LA~ky~~vkFvkI~~~~-------~~~~~~i~~ 170 (252)
+..+ +.++|...+.+. ++++|||.||++||++|+.|.|.+ .++++.|+++.|+.|+.+. +...|+|.+
T Consensus 13 f~~~~~~~~~~~~l~~~-~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v~~ 91 (134)
T 2fwh_A 13 FTQIKTVDELNQALVEA-KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLG 91 (134)
T ss_dssp CEECCSHHHHHHHHHHH-TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTCCS
T ss_pred cEEecCHHHHHHHHHHh-cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCCCC
Confidence 4445 667888878664 357999999999999999999999 9999999999999999842 347899999
Q ss_pred ccEEEEE-ECCeEE--EEeecccccCCCCCHHHHHHHHHhc
Q 025454 171 LPTVLVY-NNGAVK--ANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 171 lPTlliy-~~G~~v--~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+||+++| ++|+++ .++.|. .+.++|+.+|.+.
T Consensus 92 ~Pt~~~~d~~G~~v~~~~~~G~------~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 92 LPTILFFDGQGQEHPQARVTGF------MDAETFSAHLRDR 126 (134)
T ss_dssp SSEEEEECTTSCBCGGGCBCSC------CCHHHHHHHHHHC
T ss_pred CCEEEEECCCCCEeeeeeeeec------cCHHHHHHHHHhc
Confidence 9999999 899998 678876 4578899998864
No 84
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.60 E-value=5.3e-17 Score=125.82 Aligned_cols=104 Identities=19% Similarity=0.370 Sum_probs=86.4
Q ss_pred CCCceEEc-ChhhHHHHHHcCC-CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCccc
Q 025454 98 RFGSVMPI-SGSDFVREVSQAP-PDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLP 172 (252)
Q Consensus 98 ~fG~v~eI-s~~~f~~~V~~~~-~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lP 172 (252)
..|.+.+| +.++|...+..+. +++++||+||++||++|+.+.|.|.+++.+|+++.|+.|+.+. +...|+|.++|
T Consensus 12 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~P 91 (130)
T 1wmj_A 12 EEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMP 91 (130)
T ss_dssp SCSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTCCSSC
T ss_pred cCcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCCCccc
Confidence 45678888 5699999887631 2468999999999999999999999999999999999999864 45789999999
Q ss_pred EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 173 TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 173 Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|+++|++|+.+.++.|. +.+.|..+|.+.
T Consensus 92 t~~~~~~g~~~~~~~g~-------~~~~l~~~l~~~ 120 (130)
T 1wmj_A 92 TFLFIKDGAEADKVVGA-------RKDDLQNTIVKH 120 (130)
T ss_dssp CCCBCTTTTCCBCCCTT-------CTTTHHHHHHHH
T ss_pred eEEEEeCCeEEEEEeCC-------CHHHHHHHHHHH
Confidence 99999999998887774 235677777653
No 85
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.60 E-value=3.1e-15 Score=127.51 Aligned_cols=100 Identities=18% Similarity=0.252 Sum_probs=84.7
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC----ceEEEEeccC---CCCCCCCCcc
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA----TKFVKIISTD---CIPNYPDRNL 171 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~----vkFvkI~~~~---~~~~~~i~~l 171 (252)
.+.|..++.++|...+.+ +++|+|+||++||++|+.+.|.|.++++.|.+ +.|++|+.+. +..+|+|.++
T Consensus 14 ~~~v~~l~~~~~~~~~~~---~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 90 (241)
T 3idv_A 14 ENGVLVLNDANFDNFVAD---KDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGY 90 (241)
T ss_dssp ETTEEEECTTTHHHHHTT---CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSS
T ss_pred CCCcEEecccCHHHHHhc---CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcC
Confidence 357999999999998854 36999999999999999999999999998754 8999999875 4588999999
Q ss_pred cEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 172 PTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 172 PTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
||+++|++|+.+ ++.|. .+.+.|..++.+.
T Consensus 91 Pt~~~~~~g~~~-~~~g~------~~~~~l~~~i~~~ 120 (241)
T 3idv_A 91 PTIKILKKGQAV-DYEGS------RTQEEIVAKVREV 120 (241)
T ss_dssp SEEEEEETTEEE-ECCSC------SCHHHHHHHHHHH
T ss_pred CEEEEEcCCCcc-cccCc------ccHHHHHHHHhhc
Confidence 999999999987 35553 4577888888763
No 86
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.59 E-value=1.9e-15 Score=130.60 Aligned_cols=105 Identities=10% Similarity=0.066 Sum_probs=83.9
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC----CceEEEEeccC-----CCCCCCCC
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP----ATKFVKIISTD-----CIPNYPDR 169 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~----~vkFvkI~~~~-----~~~~~~i~ 169 (252)
-+.|..++..+|...+.+.+ ++|||+|||+||++|+.+.|.|.+++++|+ .+.|++|+++. +...|+|.
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~--~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~ 88 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSR--SAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIP 88 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCS--SEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCC
T ss_pred CCCceeCChhhHHHHHhhCC--CeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCC
Confidence 35699999999999997654 799999999999999999999999999997 49999999842 45889999
Q ss_pred cccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 170 NLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 170 ~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
++||+++|++|..++....+ .++. .+.+.|..+|.+
T Consensus 89 ~~Pt~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~ 124 (244)
T 3q6o_A 89 GFPTVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLID 124 (244)
T ss_dssp SSSEEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHH
T ss_pred ccCEEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHH
Confidence 99999999997665432222 2322 367777776655
No 87
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.59 E-value=2.5e-15 Score=141.69 Aligned_cols=133 Identities=20% Similarity=0.210 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHHHHhh--hcCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--
Q 025454 76 DRFLEEYRKKRLAEMREATK--ISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-- 151 (252)
Q Consensus 76 d~~l~~yR~kRl~el~~~~~--~~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-- 151 (252)
..|++.|...++..+.+... ...-+.|..++..+|...+.+. +++|||+|||+||++|+.+.|.|.+|+..|++
T Consensus 326 ~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~--~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~ 403 (481)
T 3f8u_A 326 ERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNE--NKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDP 403 (481)
T ss_dssp HHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCT--TCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCS
T ss_pred HHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhcC--CCcEEEEEecCcChhHHHhhHHHHHHHHHhccCC
Confidence 35777776665544332111 1234678899999999999653 47999999999999999999999999999875
Q ss_pred -ceEEEEeccC--CCCCCCCCcccEEEEEECCeE--EEEeecccccCCCCCHHHHHHHHHhcCCCCCCCC
Q 025454 152 -TKFVKIISTD--CIPNYPDRNLPTVLVYNNGAV--KANYVGLRSFGRRCTPEGVALVLCQSDPVLNDGQ 216 (252)
Q Consensus 152 -vkFvkI~~~~--~~~~~~i~~lPTlliy~~G~~--v~~~vG~~~~G~~~~~e~lE~~L~~~g~i~~~~~ 216 (252)
+.|++|+++. ++..|+|.++||+++|.+|.. +.++.|. .+.++|..+|.++..-...+.
T Consensus 404 ~v~~~~id~~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~------~~~~~l~~~l~~~~~~~~~~~ 467 (481)
T 3f8u_A 404 NIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGG------RELSDFISYLQREATNPPVIQ 467 (481)
T ss_dssp SEEEEEEETTSSCCCTTCCCCSSSEEEEECTTCTTSCEECCSC------CSHHHHHHHHHHHCSSCCCCC
T ss_pred CEEEEEEECCchhhHhhCCCcccCEEEEEeCCCeEeeeEeCCC------CCHHHHHHHHHHhcCCccccc
Confidence 8999999864 668999999999999999876 4555553 568999999998765554443
No 88
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.59 E-value=3.7e-15 Score=115.86 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=81.0
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcC-------CCchhhhHHHHHHHHHHHCC-CceEEEEec-------cCC-
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKD-------GFAECGLLMQCLEELARKYP-ATKFVKIIS-------TDC- 162 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~-------wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~-------~~~- 162 (252)
+-.+...+.++|...+.++ ++++|||+||++ ||++|+.+.|.|.+++.+|+ .+.|++|+. +..
T Consensus 4 ~~~v~~~~~~~~~~~~~~~-~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~ 82 (123)
T 1wou_A 4 YEEVSVSGFEEFHRAVEQH-NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNN 82 (123)
T ss_dssp CEEEEEESHHHHHHHHHTT-TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTC
T ss_pred ceeEEeccHHHHHHHHHHh-CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhH
Confidence 3345566899999999874 257999999999 99999999999999999997 699999998 432
Q ss_pred --CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 163 --IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 163 --~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
..+|+|.++||+++|++|.. ++|... .+.+.|+.+|.+
T Consensus 83 ~~~~~~~i~~~Pt~~~~~~~~~---~~g~~~----~~~~~l~~~i~~ 122 (123)
T 1wou_A 83 DFRKNLKVTAVPTLLKYGTPQK---LVESEC----LQANLVEMLFSE 122 (123)
T ss_dssp HHHHHHCCCSSSEEEETTSSCE---EEGGGG----GCHHHHHHHHHC
T ss_pred HHHHHCCCCeeCEEEEEcCCce---Eecccc----CCHHHHHHHHhc
Confidence 36799999999999998543 444431 356788888764
No 89
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.58 E-value=4.1e-15 Score=137.04 Aligned_cols=100 Identities=17% Similarity=0.217 Sum_probs=81.3
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-------CceEEEEeccC---CCCCCCC
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-------ATKFVKIISTD---CIPNYPD 168 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-------~vkFvkI~~~~---~~~~~~i 168 (252)
.+.|..++..+|...+.+. ++|||+|||+||++|+.+.|.|+++|..+. .+.|++||++. ++.+|+|
T Consensus 4 ~~~v~~l~~~~f~~~~~~~---~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v 80 (382)
T 2r2j_A 4 GSEITSLDTENIDEILNNA---DVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRI 80 (382)
T ss_dssp ----CBCCTTTHHHHHHHC---SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTC
T ss_pred CCceEECCHHHHHHHHhcC---CeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCC
Confidence 3568899999999988654 599999999999999999999999998862 29999999875 3588999
Q ss_pred CcccEEEEEECCeEEEE-eecccccCCCCCHHHHHHHHHh
Q 025454 169 RNLPTVLVYNNGAVKAN-YVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 169 ~~lPTlliy~~G~~v~~-~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+++||+++|++|+.+.+ +.|. .+.+.|..+|.+
T Consensus 81 ~~~Pt~~~f~~G~~~~~~~~G~------~~~~~l~~~i~~ 114 (382)
T 2r2j_A 81 SKYPTLKLFRNGMMMKREYRGQ------RSVKALADYIRQ 114 (382)
T ss_dssp CEESEEEEEETTEEEEEECCSC------CSHHHHHHHHHH
T ss_pred CcCCEEEEEeCCcEeeeeecCc------chHHHHHHHHHH
Confidence 99999999999998874 6664 356777777764
No 90
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.58 E-value=6.4e-15 Score=115.26 Aligned_cols=78 Identities=14% Similarity=0.163 Sum_probs=62.2
Q ss_pred ceEEEEEEcCCCchhhhHHHHHHHHHHHCCC------ceEEEEeccC-----CCCCCCCCcccEEEEEECCeEEEEeecc
Q 025454 121 VWVVVILYKDGFAECGLLMQCLEELARKYPA------TKFVKIISTD-----CIPNYPDRNLPTVLVYNNGAVKANYVGL 189 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~------vkFvkI~~~~-----~~~~~~i~~lPTlliy~~G~~v~~~vG~ 189 (252)
..+||.|||+||++|+.|.+.+ +..|+. +.+++|+.+. .+..|+|.++|||++|++|+.+.+++|+
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~i---~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~ 95 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAEI---APQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGY 95 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHHT---TTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHHHHHHH---HhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCC
Confidence 5899999999999999999644 334432 5788887653 4578999999999999999999999998
Q ss_pred cccCCCCCHHHHHHHHHh
Q 025454 190 RSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 190 ~~~G~~~~~e~lE~~L~~ 207 (252)
. ..+.+..+|.+
T Consensus 96 ~------~~~~f~~~L~~ 107 (116)
T 3dml_A 96 P------GEDFFWPMLAR 107 (116)
T ss_dssp C------CHHHHHHHHHH
T ss_pred C------CHHHHHHHHHH
Confidence 4 45666666654
No 91
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.57 E-value=1.1e-14 Score=124.14 Aligned_cols=100 Identities=18% Similarity=0.276 Sum_probs=84.2
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHC----CCceEEEEeccC---CCCCCCCCcc
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKY----PATKFVKIISTD---CIPNYPDRNL 171 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky----~~vkFvkI~~~~---~~~~~~i~~l 171 (252)
-..+..++..+|...+.+. ++|||.||++||++|+.+.|.|.+++..| +.+.|++|+.+. +...|+|.++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~---~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 205 (241)
T 3idv_A 129 PEVTLVLTKENFDEVVNDA---DIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGY 205 (241)
T ss_dssp CCSSEECCTTTHHHHHHHC---SEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSS
T ss_pred cccceeccHHHHHHhhccC---CeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCccc
Confidence 3468888999999998765 48999999999999999999999999876 449999999874 4589999999
Q ss_pred cEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 172 PTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 172 PTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
||+++|++|+.+. +.|. .+.+.|..+|.+.
T Consensus 206 Pt~~~~~~g~~~~-~~g~------~~~~~l~~~l~~~ 235 (241)
T 3idv_A 206 PTLKIFRKGRPYD-YNGP------REKYGIVDYMIEQ 235 (241)
T ss_dssp SEEEEEETTEEEE-CCSC------CSHHHHHHHHHHH
T ss_pred CEEEEEECCeEEE-ecCC------CCHHHHHHHHHhh
Confidence 9999999998876 5553 4678888887754
No 92
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.57 E-value=1.3e-14 Score=131.85 Aligned_cols=104 Identities=19% Similarity=0.229 Sum_probs=87.7
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC---ceEEEEeccCC-CCCCCCCcccEE
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA---TKFVKIISTDC-IPNYPDRNLPTV 174 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~---vkFvkI~~~~~-~~~~~i~~lPTl 174 (252)
-+.|..++..+|...+.+.+ ++|+|.|||+||++|+.+.|.|.+|+.+|++ +.|++||++.. ...|+|.++||+
T Consensus 248 ~~~v~~l~~~~f~~~~~~~~--k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~ 325 (361)
T 3uem_A 248 KQPVKVLVGKNFEDVAFDEK--KNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTL 325 (361)
T ss_dssp TSSSEEECTTTHHHHHTCTT--CEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCBCSSCCCCSSSEE
T ss_pred cCCcEEeecCchhhhcccCC--CcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccchhhcCCcccCeE
Confidence 35689999999999996543 6999999999999999999999999999975 89999998743 688999999999
Q ss_pred EEEECC--eEEEEeecccccCCCCCHHHHHHHHHhcCC
Q 025454 175 LVYNNG--AVKANYVGLRSFGRRCTPEGVALVLCQSDP 210 (252)
Q Consensus 175 liy~~G--~~v~~~vG~~~~G~~~~~e~lE~~L~~~g~ 210 (252)
++|.+| +.+.++.|. .+.+.|..+|.++|-
T Consensus 326 ~~~~~~~~~~~~~~~G~------~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 326 KFFPASADRTVIDYNGE------RTLDGFKKFLESGGQ 357 (361)
T ss_dssp EEECSSSSCCCEECCSC------SSHHHHHHHHTTTSC
T ss_pred EEEECCCCcceeEecCC------CCHHHHHHHHHhcCC
Confidence 999665 555666653 568999999988763
No 93
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.57 E-value=8.2e-15 Score=139.13 Aligned_cols=104 Identities=20% Similarity=0.264 Sum_probs=88.0
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC----CceEEEEeccC--CCCCCCCCccc
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP----ATKFVKIISTD--CIPNYPDRNLP 172 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~----~vkFvkI~~~~--~~~~~~i~~lP 172 (252)
-+.|..++..+|...|.+.+ ++|||+|||+||++|+.+.|.|.+|+..|+ .+.|++||++. ... |+|.++|
T Consensus 357 ~~~v~~l~~~~f~~~v~~~~--k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~-~~v~~~P 433 (504)
T 2b5e_A 357 DSSVFQLVGKNHDEIVNDPK--KDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRG-VVIEGYP 433 (504)
T ss_dssp SCSEEEECTTTHHHHHHCTT--CCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCSS-CCCSSSS
T ss_pred cccceecccccHHHhhccCC--CCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcccccc-CCceecC
Confidence 36799999999999997644 689999999999999999999999999886 69999999863 344 9999999
Q ss_pred EEEEEECCeE--EEEeecccccCCCCCHHHHHHHHHhcCCC
Q 025454 173 TVLVYNNGAV--KANYVGLRSFGRRCTPEGVALVLCQSDPV 211 (252)
Q Consensus 173 Tlliy~~G~~--v~~~vG~~~~G~~~~~e~lE~~L~~~g~i 211 (252)
|+++|++|+. +.++.|. .+.+.|..+|.+.+..
T Consensus 434 t~~~~~~G~~~~~~~~~G~------~~~~~l~~~i~~~~~~ 468 (504)
T 2b5e_A 434 TIVLYPGGKKSESVVYQGS------RSLDSLFDFIKENGHF 468 (504)
T ss_dssp EEEEECCTTSCCCCBCCSC------CCHHHHHHHHHHHCTT
T ss_pred eEEEEeCCceecceEecCC------CCHHHHHHHHHhcCCC
Confidence 9999999976 5555553 4678999999987543
No 94
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.56 E-value=6.5e-15 Score=139.82 Aligned_cols=100 Identities=14% Similarity=0.214 Sum_probs=85.5
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC---CCCCCCCCcccE
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD---CIPNYPDRNLPT 173 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~---~~~~~~i~~lPT 173 (252)
-+.|..++..+|...+.+ +.+|||+|||+||++|+.+.|.|.++|..+.+ +.|++||++. +..+|+|+++||
T Consensus 13 ~~~v~~l~~~~f~~~~~~---~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt 89 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQS---HDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPS 89 (504)
T ss_dssp TSSCEECCTTTHHHHHTT---CSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCCcEECCHHHHHHHHhc---CCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCE
Confidence 457999999999998853 36999999999999999999999999999974 9999999875 458999999999
Q ss_pred EEEEECCeE--EEEeecccccCCCCCHHHHHHHHHh
Q 025454 174 VLVYNNGAV--KANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 174 lliy~~G~~--v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+++|++|+. +.++.|. .+.+.|..+|.+
T Consensus 90 ~~~~~~g~~~~~~~~~G~------~~~~~l~~~l~~ 119 (504)
T 2b5e_A 90 LKIFKNSDVNNSIDYEGP------RTAEAIVQFMIK 119 (504)
T ss_dssp EEEEETTCTTCEEECCSC------CSHHHHHHHHHH
T ss_pred EEEEeCCccccceeecCC------CCHHHHHHHHHH
Confidence 999999987 7777764 356777777765
No 95
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.56 E-value=3.6e-14 Score=112.02 Aligned_cols=112 Identities=13% Similarity=0.051 Sum_probs=91.3
Q ss_pred cCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCCCCCCc--
Q 025454 97 SRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIPNYPDRN-- 170 (252)
Q Consensus 97 ~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~~~i~~-- 170 (252)
.++.-|.++|.++|.+.+. ++ .+|+|.||++ |++|+.+.|.|+++|++|.+ ++|+++|.++ ++..|+|++
T Consensus 3 c~~plv~~~t~~~f~~~~~-~~--~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~ 78 (133)
T 2djk_A 3 LGSPLIGEIGPETYSDYMS-AG--IPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDK 78 (133)
T ss_dssp CSCCCSEECCHHHHHHHHH-TT--SCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSS
T ss_pred cccCceeccChHHHHHHhc-CC--CCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCccc
Confidence 3456788999999987754 33 6899999999 89999999999999999975 9999999875 457999999
Q ss_pred ccEEEEEEC--CeEEEEee--cccccCCCCCHHHHHHHHHh--cCCCCCCCCCCC
Q 025454 171 LPTVLVYNN--GAVKANYV--GLRSFGRRCTPEGVALVLCQ--SDPVLNDGQSGS 219 (252)
Q Consensus 171 lPTlliy~~--G~~v~~~v--G~~~~G~~~~~e~lE~~L~~--~g~i~~~~~~~~ 219 (252)
+|||++|++ |+.. ++. | .++.+.|..||.+ .|-+...++++.
T Consensus 79 iPtl~i~~~~~g~~~-~~~~~g------~~~~~~l~~fi~~~l~Gkl~p~~kSe~ 126 (133)
T 2djk_A 79 FPAFAIQEVAKNQKF-PFDQEK------EITFEAIKAFVDDFVAGKIEPSIKSEP 126 (133)
T ss_dssp SSEEEEECTTTCCBC-CCCSSS------CCCHHHHHHHHHHHHHTCCCCSSCCCC
T ss_pred CCEEEEEecCcCccc-CCCCcc------ccCHHHHHHHHHHHHcCCcCccccCCC
Confidence 999999997 6653 443 4 3567889888876 577877777654
No 96
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.56 E-value=8.5e-15 Score=124.13 Aligned_cols=98 Identities=9% Similarity=0.068 Sum_probs=80.1
Q ss_pred eEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-----CceEEEEeccC---CCCCCCCCcccE
Q 025454 102 VMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-----ATKFVKIISTD---CIPNYPDRNLPT 173 (252)
Q Consensus 102 v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-----~vkFvkI~~~~---~~~~~~i~~lPT 173 (252)
+..++.+.|..... . .+..+||.||++||++|+.+.|.|.+++..|+ .+.|++|+.+. +...|+|.++||
T Consensus 118 ~~~l~~~~~~~~~~-~-~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt 195 (226)
T 1a8l_A 118 ETNLMDETKQAIRN-I-DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPK 195 (226)
T ss_dssp CCCCCHHHHHHHTT-C-CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCE
T ss_pred CCCCCHHHHHHHHh-c-CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCe
Confidence 45677777766543 2 22344999999999999999999999999997 79999999875 457899999999
Q ss_pred EEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 174 VLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 174 lliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+++|++|+.+.++.|.. +.+.|..+|.+
T Consensus 196 ~~~~~~G~~~~~~~G~~------~~~~l~~~l~~ 223 (226)
T 1a8l_A 196 IVIQVNGEDRVEFEGAY------PEKMFLEKLLS 223 (226)
T ss_dssp EEEEETTEEEEEEESCC------CHHHHHHHHHH
T ss_pred EEEEeCCceeEEEcCCC------CHHHHHHHHHH
Confidence 99999999999998863 46778887765
No 97
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.54 E-value=8e-15 Score=114.52 Aligned_cols=88 Identities=18% Similarity=0.247 Sum_probs=74.3
Q ss_pred CceEEEEEEcCCCchhhhHHHHHH--HHHHHC-CCceEEEEec---cC---CCCCCCC---CcccEEEEE-ECCeEEEEe
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLE--ELARKY-PATKFVKIIS---TD---CIPNYPD---RNLPTVLVY-NNGAVKANY 186 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~--~LA~ky-~~vkFvkI~~---~~---~~~~~~i---~~lPTlliy-~~G~~v~~~ 186 (252)
+++|||+||++||++|+.+.|.|. +++..| ..+.|+.|+. +. +...|+| .++||+++| ++|+.+.++
T Consensus 29 ~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~ 108 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTT 108 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEEC
T ss_pred CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEe
Confidence 368999999999999999999999 999988 4699999998 43 3478999 999999999 899999998
Q ss_pred eccccc-CCCCCHHHHHHHHHh
Q 025454 187 VGLRSF-GRRCTPEGVALVLCQ 207 (252)
Q Consensus 187 vG~~~~-G~~~~~e~lE~~L~~ 207 (252)
.|-.-- +...+.+.++.+|.+
T Consensus 109 ~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 109 KGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp CSCTTTTGGGSCHHHHHHHHHH
T ss_pred cCCcccccccCCHHHHHHHHHH
Confidence 883211 335678899998875
No 98
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.54 E-value=3.9e-14 Score=101.56 Aligned_cols=77 Identities=21% Similarity=0.315 Sum_probs=65.9
Q ss_pred ceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccC---CCCCCCCCcccEEEEEECCeEEEEeecccccCCCC
Q 025454 121 VWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTD---CIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRC 196 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~---~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~ 196 (252)
.++||.||++||++|+.+.|.|.+++++|+ ++.|+.++.++ +...|++.++||+++ +|+. ++.|. .
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~------~ 72 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV--EFIGA------P 72 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE--ECCSS------S
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE--eeecC------C
Confidence 368999999999999999999999999998 69999998753 568999999999999 9987 66664 3
Q ss_pred CHHHHHHHHHh
Q 025454 197 TPEGVALVLCQ 207 (252)
Q Consensus 197 ~~e~lE~~L~~ 207 (252)
+.+.|..+|.+
T Consensus 73 ~~~~l~~~l~~ 83 (85)
T 1fo5_A 73 TKEALVEAIKK 83 (85)
T ss_dssp SSHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 46788888765
No 99
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.53 E-value=1.8e-14 Score=132.35 Aligned_cols=97 Identities=11% Similarity=0.094 Sum_probs=77.4
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHH------HHHHHHHHHCC--CceEEEEeccC---CCCCCCC
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLM------QCLEELARKYP--ATKFVKIISTD---CIPNYPD 168 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~------~~l~~LA~ky~--~vkFvkI~~~~---~~~~~~i 168 (252)
+.|.+++..+|.+.|.+. .+|||+||||||++|+... |.++.+|..+. .++|++||++. ++.+|+|
T Consensus 13 ~~v~~lt~~~f~~~i~~~---~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V 89 (367)
T 3us3_A 13 DRVINVNAKNYKNVFKKY---EVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGL 89 (367)
T ss_dssp CCCEECCTTTHHHHHHHC---SEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTC
T ss_pred CccEECCHHHHHHHHhhC---CeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCC
Confidence 469999999999999764 5899999999999985544 68899998775 49999999975 4589999
Q ss_pred CcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 169 RNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 169 ~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
+++|||++|++|+.+ .+.|.. +.+.|..+|.
T Consensus 90 ~~~PTl~~f~~G~~~-~y~G~~------~~~~i~~~i~ 120 (367)
T 3us3_A 90 TEEDSIYVFKEDEVI-EYDGEF------SADTLVEFLL 120 (367)
T ss_dssp CSTTEEEEEETTEEE-ECCSCC------SHHHHHHHHH
T ss_pred CcCceEEEEECCcEE-EeCCCC------CHHHHHHHHH
Confidence 999999999999875 566543 3455554443
No 100
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.52 E-value=2.7e-14 Score=118.12 Aligned_cols=80 Identities=14% Similarity=0.198 Sum_probs=65.4
Q ss_pred hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCC---CCcccEEEEEEC-C
Q 025454 108 SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYP---DRNLPTVLVYNN-G 180 (252)
Q Consensus 108 ~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~---i~~lPTlliy~~-G 180 (252)
+++...+... ++++|||.|||+|||+|+.+.|.|.+++..|+++.|+.|+.+. .+..|. +.++||+++|++ |
T Consensus 43 ~~~~~~l~~~-~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G 121 (167)
T 1z6n_A 43 SALTERLQRI-ERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEF 121 (167)
T ss_dssp HHHHHHHHTC-CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTC
T ss_pred HHHHHHHHHh-CCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCC
Confidence 3444555443 3578999999999999999999999999999999999998753 456676 999999999998 5
Q ss_pred eEEEEeec
Q 025454 181 AVKANYVG 188 (252)
Q Consensus 181 ~~v~~~vG 188 (252)
+.+.++.|
T Consensus 122 ~~~~~~g~ 129 (167)
T 1z6n_A 122 NLLGRFVE 129 (167)
T ss_dssp CEEEEEES
T ss_pred CEEEEEcC
Confidence 88877744
No 101
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.52 E-value=5.3e-15 Score=114.79 Aligned_cols=100 Identities=16% Similarity=0.174 Sum_probs=78.7
Q ss_pred EEcChhhHHHHHHcC-CCCceEEEEEEcCCCchhhhHHHHH---HHHHHHCC-CceEEEEeccC-----CCCCCCCCccc
Q 025454 103 MPISGSDFVREVSQA-PPDVWVVVILYKDGFAECGLLMQCL---EELARKYP-ATKFVKIISTD-----CIPNYPDRNLP 172 (252)
Q Consensus 103 ~eIs~~~f~~~V~~~-~~~~~VVV~fya~wc~~Ck~l~~~l---~~LA~ky~-~vkFvkI~~~~-----~~~~~~i~~lP 172 (252)
..++..+|.+.+..+ .++++|||.||++||++|+.+.|.+ ..++..+. .+.|+.|+.+. +...|+|.++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~P 88 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYP 88 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSC
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCC
Confidence 344667777777522 1236899999999999999999999 77776653 48899998762 45789999999
Q ss_pred EEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 173 TVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 173 Tlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|+++| ++|+.+.++.|.. +.+.|..+|.+.
T Consensus 89 t~~~~d~~G~~~~~~~G~~------~~~~l~~~l~~~ 119 (130)
T 2kuc_A 89 TLLFINSSGEVVYRLVGAE------DAPELLKKVKLG 119 (130)
T ss_dssp EEEEECTTSCEEEEEESCC------CHHHHHHHHHHH
T ss_pred EEEEECCCCcEEEEecCCC------CHHHHHHHHHHH
Confidence 99999 7999999998863 567888888764
No 102
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.51 E-value=3.9e-14 Score=128.74 Aligned_cols=97 Identities=10% Similarity=0.075 Sum_probs=78.4
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHH-------HHHHHHHCC--CceEEEEeccC---CCCCCC
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQC-------LEELARKYP--ATKFVKIISTD---CIPNYP 167 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~-------l~~LA~ky~--~vkFvkI~~~~---~~~~~~ 167 (252)
+.|.+++..+|...+.+. .+|+|.||||||+ |+.+.|. |+++|..+. +++|++||++. ++.+|+
T Consensus 11 ~~v~~l~~~~f~~~i~~~---~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~ 86 (350)
T 1sji_A 11 DRVVSLTEKNFKQVLKKY---DVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLG 86 (350)
T ss_dssp CCCEEECHHHHHHHHTTC---SEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHT
T ss_pred CccEECCHHHHHHHHhhC---CeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcC
Confidence 358899999999988643 5899999999999 9999888 999999875 49999999875 358899
Q ss_pred CCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 168 DRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 168 i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|+++||+++|++|+ +..+.|.. +.+.|..+|.+
T Consensus 87 v~~~Pt~~~~~~g~-~~~~~G~~------~~~~l~~~i~~ 119 (350)
T 1sji_A 87 FDEEGSLYVLKGDR-TIEFDGEF------AADVLVEFLLD 119 (350)
T ss_dssp CCSTTEEEEEETTE-EEEECSCC------CHHHHHHHHHT
T ss_pred CCccceEEEEECCc-EEEecCCC------CHHHHHHHHHH
Confidence 99999999999999 45677653 34445444443
No 103
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.50 E-value=6.6e-14 Score=139.52 Aligned_cols=98 Identities=16% Similarity=0.259 Sum_probs=76.6
Q ss_pred ceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC---CCCCCCCCcccEEEE
Q 025454 101 SVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD---CIPNYPDRNLPTVLV 176 (252)
Q Consensus 101 ~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~---~~~~~~i~~lPTlli 176 (252)
.|..++..+|...|.+ +.+|||+||++||++|+.|.|.|+++|+.+.+ ++|++||++. +..+|+|.++||+++
T Consensus 117 ~v~~l~~~~f~~~i~~---~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 193 (780)
T 3apo_A 117 EIITLERREFDAAVNS---GELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFI 193 (780)
T ss_dssp TEEECCHHHHHHHHTS---SSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCSSCC--------CEEEE
T ss_pred ceeeechHhHHhhhcC---CCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcHHHHHHcCCceeeeEEE
Confidence 5899999999999943 36899999999999999999999999999976 9999999864 568999999999999
Q ss_pred EECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 177 YNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 177 y~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|++|+.+.++.|.. +.+.|..+|.+
T Consensus 194 ~~~g~~~~~~~G~~------~~~~l~~~l~~ 218 (780)
T 3apo_A 194 FRSGMAAVKYNGDR------SKESLVAFAMQ 218 (780)
T ss_dssp ECTTSCCEECCSCS------CHHHHHHHHHT
T ss_pred EeCCcEeeEecCCC------CHHHHHHHHHH
Confidence 99999888888753 45556665554
No 104
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.49 E-value=4.1e-14 Score=101.46 Aligned_cols=76 Identities=16% Similarity=0.252 Sum_probs=65.0
Q ss_pred eEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccC---CCCCCCCCcccEEEEEECCeEEEEeecccccCCCCC
Q 025454 122 WVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTD---CIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCT 197 (252)
Q Consensus 122 ~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~---~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~ 197 (252)
.+||.||++||++|+.+.|.|.+++++|+ .+.|+.++.+. +...|++.++||+++ +|+. ++.|. .+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~------~~ 72 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV--RFVGA------PS 72 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE--EEECS------SC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE--EEccC------CC
Confidence 36899999999999999999999999998 59999998763 468999999999999 9987 67775 24
Q ss_pred HHHHHHHHHh
Q 025454 198 PEGVALVLCQ 207 (252)
Q Consensus 198 ~e~lE~~L~~ 207 (252)
.+.|..+|.+
T Consensus 73 ~~~l~~~l~~ 82 (85)
T 1nho_A 73 REELFEAIND 82 (85)
T ss_dssp CHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5778888765
No 105
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.17 E-value=7.1e-15 Score=114.22 Aligned_cols=82 Identities=17% Similarity=0.178 Sum_probs=69.0
Q ss_pred CceEEEEEEcCCCchhhhHHHHH---HHHHHHCCC-ceEEEEecc-----CCCCCCCCCcccEEEEE--ECCeE--EEEe
Q 025454 120 DVWVVVILYKDGFAECGLLMQCL---EELARKYPA-TKFVKIIST-----DCIPNYPDRNLPTVLVY--NNGAV--KANY 186 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l---~~LA~ky~~-vkFvkI~~~-----~~~~~~~i~~lPTlliy--~~G~~--v~~~ 186 (252)
+++|||.||++||++|+.+.|.| ..+++.++. +.|+.|+.+ .+...|+|.++||+++| ++|+. +.++
T Consensus 19 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~ 98 (130)
T 2lst_A 19 GRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVGRL 98 (130)
Confidence 46899999999999999999999 999998876 889999873 35689999999999999 78999 8888
Q ss_pred ecccccCCCCCHHHHHHHHHh
Q 025454 187 VGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 187 vG~~~~G~~~~~e~lE~~L~~ 207 (252)
.|.. +.+.|..+|.+
T Consensus 99 ~G~~------~~~~l~~~l~~ 113 (130)
T 2lst_A 99 FGSR------PRAEFLKELRQ 113 (130)
Confidence 8864 34566666654
No 106
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.44 E-value=2.2e-13 Score=115.86 Aligned_cols=97 Identities=9% Similarity=0.027 Sum_probs=78.8
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEEEE
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTVLV 176 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTlli 176 (252)
|.+..++.++|...+.. .+..+||.||++||++|+.+.|.|.+++..|+.+.|+.|+.+. +...|+|.++||+++
T Consensus 118 ~~~~~l~~~~~~~~~~~--~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 195 (229)
T 2ywm_A 118 QRKPQLSEKTLELLQVV--DIPIEIWVFVTTSCGYCPSAAVMAWDFALANDYITSKVIDASENQDLAEQFQVVGVPKIVI 195 (229)
T ss_dssp TTCCSCCHHHHHHHTTC--CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEEGGGCHHHHHHTTCCSSSEEEE
T ss_pred CCccCCCHHHHHHHHhc--CCCeEEEEEECCCCcchHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHHcCCcccCEEEE
Confidence 34677888888876632 2245588999999999999999999999999999999999864 458899999999998
Q ss_pred EECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 177 YNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 177 y~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+|+ +.++.|. .+.+.|..+|.+
T Consensus 196 --~G~-~~~~~G~------~~~~~l~~~l~~ 217 (229)
T 2ywm_A 196 --NKG-VAEFVGA------QPENAFLGYIMA 217 (229)
T ss_dssp --GGG-TEEEESC------CCHHHHHHHHHH
T ss_pred --CCE-EEEeeCC------CCHHHHHHHHHH
Confidence 888 6667775 356777777764
No 107
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.43 E-value=4.2e-13 Score=103.66 Aligned_cols=82 Identities=16% Similarity=0.188 Sum_probs=70.5
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC-------------------------CCCCCCCCcccEE
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD-------------------------CIPNYPDRNLPTV 174 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~-------------------------~~~~~~i~~lPTl 174 (252)
++++||+||++||++|+.+.|.|.+++++|+++.|+.|+.+. +...|++.++||+
T Consensus 24 ~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~ 103 (136)
T 1lu4_A 24 GKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAF 103 (136)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEE
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEE
Confidence 468999999999999999999999999999999999998654 2357999999999
Q ss_pred EEE-ECCeEEEEee---cccccCCCCCHHHHHHHHHhc
Q 025454 175 LVY-NNGAVKANYV---GLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 175 liy-~~G~~v~~~v---G~~~~G~~~~~e~lE~~L~~~ 208 (252)
++| ++|+++ ++. |. .+.+.|..+|.+.
T Consensus 104 ~lid~~G~i~-~~~~~~g~------~~~~~l~~~l~~l 134 (136)
T 1lu4_A 104 VFYRADGTST-FVNNPTAA------MSQDELSGRVAAL 134 (136)
T ss_dssp EEECTTSCEE-EECCSSSC------CCHHHHHHHHHHC
T ss_pred EEECCCCcEE-EEEcCCCc------cCHHHHHHHHHHH
Confidence 999 689998 887 54 4578888888763
No 108
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.43 E-value=1.3e-13 Score=97.46 Aligned_cols=74 Identities=26% Similarity=0.390 Sum_probs=61.4
Q ss_pred EEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccCCCCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHH
Q 025454 123 VVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGV 201 (252)
Q Consensus 123 VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~l 201 (252)
+.|.||++||++|+.+.|.|.+++..+. .+.|++|+..++...|+|.++||+++ +|+.+.+ |.. .+.+.|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~Pt~~~--~G~~~~~--G~~-----~~~~~l 72 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIKEMDQILEAGLTALPGLAV--DGELKIM--GRV-----ASKEEI 72 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHTCSSSSCEEE--TTEEEEC--SSC-----CCHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEecCHHHHHHCCCCcCCEEEE--CCEEEEc--CCC-----CCHHHH
Confidence 4689999999999999999999999998 59999998445568899999999999 9998765 542 156777
Q ss_pred HHHH
Q 025454 202 ALVL 205 (252)
Q Consensus 202 E~~L 205 (252)
..+|
T Consensus 73 ~~~l 76 (77)
T 1ilo_A 73 KKIL 76 (77)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 7665
No 109
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.43 E-value=3.8e-13 Score=104.82 Aligned_cols=81 Identities=14% Similarity=0.242 Sum_probs=70.1
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC----------------------------CCCCCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYP--ATKFVKIISTD----------------------------CIPNYPD 168 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~----------------------------~~~~~~i 168 (252)
++++|||+||++||++|+.+.|.|.+++++|+ ++.|+.|+.+. +...|++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 45799999999999999999999999999998 69999997642 2478999
Q ss_pred CcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHH
Q 025454 169 RNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVL 205 (252)
Q Consensus 169 ~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L 205 (252)
.++||++++ ++|+++..+.|. .+.+.|..+|
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~------~~~~~l~~~l 144 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGP------MTAEQLKEWT 144 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESC------CCHHHHHHHH
T ss_pred CccCeEEEEcCCCcEEEEEcCC------cCHHHHHHhh
Confidence 999999999 899999999886 4567777766
No 110
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.42 E-value=1.3e-13 Score=112.50 Aligned_cols=100 Identities=9% Similarity=0.048 Sum_probs=72.2
Q ss_pred EEcChhhHHHHHHcC-CCCceEEEEEEcCCCchhhhHHHHH---HHHHHHCC-CceEEEEeccCC---------------
Q 025454 103 MPISGSDFVREVSQA-PPDVWVVVILYKDGFAECGLLMQCL---EELARKYP-ATKFVKIISTDC--------------- 162 (252)
Q Consensus 103 ~eIs~~~f~~~V~~~-~~~~~VVV~fya~wc~~Ck~l~~~l---~~LA~ky~-~vkFvkI~~~~~--------------- 162 (252)
..++..+|.+.+..+ .++++|||+|||+||++|+.|.+.+ ..+.+.+. ++.|+.|+.+..
T Consensus 29 ~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 29 VHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred cccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchh
Confidence 344566777666422 1357999999999999999984433 44444443 589999987532
Q ss_pred --------------CCCCCCCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 163 --------------IPNYPDRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 163 --------------~~~~~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
...|++.++||+++| ++|+++.++.|.. .+.+.+..+|.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~-----~~~~~l~~~l~~ 163 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYD-----EDISKYINFLQT 163 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSC-----CCHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCC-----CCHHHHHHHHHH
Confidence 356999999999999 8999999888763 126777666654
No 111
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.42 E-value=2.6e-13 Score=130.55 Aligned_cols=104 Identities=10% Similarity=0.067 Sum_probs=81.2
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC----ceEEEEeccC-----CCCCCCCCc
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA----TKFVKIISTD-----CIPNYPDRN 170 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~----vkFvkI~~~~-----~~~~~~i~~ 170 (252)
+.|..++.++|...+.+.+ ++|||.|||+||++|+.+.|.|.+++++|.+ +.|++||++. +...|+|.+
T Consensus 12 ~~V~~Lt~~~f~~~v~~~~--k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 12 DPLTLLDADSVRPTVLGSS--SAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp SSSEEECTTTHHHHHSSCS--SEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CCcEECChHHHHHHHHhCC--CeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 4689999999999997653 7999999999999999999999999999875 9999999842 458899999
Q ss_pred ccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 171 LPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 171 lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+||+++|.+|...++.+.. ..|. .+.+.|..+|.+
T Consensus 90 ~PTl~~f~~g~~~G~~~~~-~~g~-~~~~~L~~~l~~ 124 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATL-PGAG-ANVQTLRMRLID 124 (519)
T ss_dssp BSEEEEECTTCCSCCCEEE-CCSS-CCHHHHHHHHHH
T ss_pred cCEEEEEcCcccCCCceeE-ecCC-CCHHHHHHHHHH
Confidence 9999999965443221111 1122 456777776655
No 112
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.41 E-value=9e-14 Score=132.07 Aligned_cols=106 Identities=18% Similarity=0.265 Sum_probs=82.3
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC---------CceEEEEeccC---CCCCCC
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP---------ATKFVKIISTD---CIPNYP 167 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~---------~vkFvkI~~~~---~~~~~~ 167 (252)
+.|+.++.++|...|.+. ++++|||+|||+||++|+.+.|.|.++++.|+ .+.|++||.+. +...|+
T Consensus 23 ~~V~~Lt~~~F~~~l~~~-~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 23 SSVVDLSGDDFSRVHRVA-PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp TTEEECSCSCGGGTCTTG-GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCcEECCHHHHHHHHHhC-CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 579999999999887643 34689999999999999999999999999997 39999999875 358899
Q ss_pred CCcccEEEEEECCe--EEEEeeccccc------CCCCCHHHHHHHHH
Q 025454 168 DRNLPTVLVYNNGA--VKANYVGLRSF------GRRCTPEGVALVLC 206 (252)
Q Consensus 168 i~~lPTlliy~~G~--~v~~~vG~~~~------G~~~~~e~lE~~L~ 206 (252)
|.++||+++|++|. .+.++.|.... ...++.+.|+..+.
T Consensus 102 V~~~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e 148 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVR 148 (470)
T ss_dssp CCSSCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHH
T ss_pred CCccCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHH
Confidence 99999999998654 34445553322 23456666555444
No 113
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.41 E-value=8.2e-14 Score=113.56 Aligned_cols=70 Identities=14% Similarity=0.166 Sum_probs=56.8
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHH--HHCCCceEEEEecc----CCCCCCCCCcccEEEEEE-CCeEEEEeecc
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELA--RKYPATKFVKIIST----DCIPNYPDRNLPTVLVYN-NGAVKANYVGL 189 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA--~ky~~vkFvkI~~~----~~~~~~~i~~lPTlliy~-~G~~v~~~vG~ 189 (252)
+++|||.|||+||++|+.|.|.+.++. ..+.+..|+.|+.+ +....|++.++||+++|. +|+++.+++|.
T Consensus 44 ~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 44 KKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCTTCCCS
T ss_pred CCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEEEEeCC
Confidence 369999999999999999999998643 23333457777653 235689999999999999 99999999996
No 114
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.40 E-value=8.1e-13 Score=101.67 Aligned_cols=81 Identities=15% Similarity=0.187 Sum_probs=69.6
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC--------------------------CCCCCCCCcccE
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD--------------------------CIPNYPDRNLPT 173 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~--------------------------~~~~~~i~~lPT 173 (252)
++++||+||++||++|+.+.|.|.+++.+|+++.|+.|+.+. +...|++.++||
T Consensus 25 ~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~ 104 (136)
T 1zzo_A 25 GKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPA 104 (136)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSE
T ss_pred CCeEEEEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCce
Confidence 468999999999999999999999999999999999998632 236799999999
Q ss_pred EEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 174 VLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 174 lliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+++| ++|+++ ++.|. .+.+.|..+|.+
T Consensus 105 ~~~id~~g~i~-~~~g~------~~~~~l~~~l~~ 132 (136)
T 1zzo_A 105 YAFVDPHGNVD-VVRGR------MSQDELTRRVTA 132 (136)
T ss_dssp EEEECTTCCEE-EEESC------CCHHHHHHHHHH
T ss_pred EEEECCCCCEE-EEecC------CCHHHHHHHHHH
Confidence 9999 589998 88875 357888888765
No 115
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.39 E-value=5e-13 Score=116.74 Aligned_cols=97 Identities=13% Similarity=0.195 Sum_probs=80.3
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEEc--CCCchhhhHHHHHHHHHHHC---CCceEEEEeccC--------CCCCC
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILYK--DGFAECGLLMQCLEELARKY---PATKFVKIISTD--------CIPNY 166 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fya--~wc~~Ck~l~~~l~~LA~ky---~~vkFvkI~~~~--------~~~~~ 166 (252)
..|..++..+|...|... .+|||.||| |||+ |.|.|.+||..| +.+.|++||+++ +...|
T Consensus 5 ~~v~~Lt~~nF~~~i~~~---~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~ 77 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKS---KFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKY 77 (240)
T ss_dssp TTCEECCTTHHHHHGGGC---SEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHT
T ss_pred CCceECCHHHHHHHHcCC---CCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHc
Confidence 358899999999977533 589999999 9999 999999999987 469999999554 34789
Q ss_pred CCC--cccEEEEEECCe--EEEEeecccccCCCCCHHHHHHHHHhcC
Q 025454 167 PDR--NLPTVLVYNNGA--VKANYVGLRSFGRRCTPEGVALVLCQSD 209 (252)
Q Consensus 167 ~i~--~lPTlliy~~G~--~v~~~vG~~~~G~~~~~e~lE~~L~~~g 209 (252)
+|+ ++|||++|++|+ .+.++.|. .+.+.|..||.+..
T Consensus 78 ~V~~~~~PTl~~f~~G~~~~~~~y~G~------~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 78 KLDKESYPVFYLFRDGDFENPVPYTGA------VKVGAIQRWLKGQG 118 (240)
T ss_dssp TCCGGGCSEEEEEETTCSSCCEECCSC------SCHHHHHHHHHHTT
T ss_pred CCCCCCCCEEEEEeCCCcCcceeecCC------CCHHHHHHHHHHhc
Confidence 999 999999999998 35566654 45788999998774
No 116
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.39 E-value=7e-13 Score=106.97 Aligned_cols=83 Identities=11% Similarity=0.077 Sum_probs=68.2
Q ss_pred CceEEEEEE-cCCCchhhhHHHHH---HHHHHHC-CCceEEEEeccC--------------CCCCCCCCcccEEEEE-EC
Q 025454 120 DVWVVVILY-KDGFAECGLLMQCL---EELARKY-PATKFVKIISTD--------------CIPNYPDRNLPTVLVY-NN 179 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck~l~~~l---~~LA~ky-~~vkFvkI~~~~--------------~~~~~~i~~lPTlliy-~~ 179 (252)
+++|||.|| ++||++|+.+.|.| .+++..+ .++.|+.|+.+. +...|+|.++||+++| ++
T Consensus 47 gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~ 126 (154)
T 2ju5_A 47 HKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFIDAE 126 (154)
T ss_dssp CCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEECTT
T ss_pred CCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEcCC
Confidence 468999999 99999999999999 7887665 459999998753 2478999999999999 89
Q ss_pred CeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 180 GAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 180 G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|+++.++ |.. ..+.+.+..+|.+
T Consensus 127 G~~~~~~-G~~----~~~~~~l~~~l~~ 149 (154)
T 2ju5_A 127 GKQLARM-GFE----PGGGAAYVSKVKS 149 (154)
T ss_dssp CCEEEEE-CCC----TTCHHHHHHHHHH
T ss_pred CCEEEEe-cCC----CCCHHHHHHHHHH
Confidence 9999998 874 1246677776654
No 117
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.38 E-value=7.8e-13 Score=116.08 Aligned_cols=95 Identities=11% Similarity=0.128 Sum_probs=77.7
Q ss_pred CceEEcChhhHHHHHHcCCCCceEEEEEE--cCCCchhhhHHHHHHHHHHHC----CCceEEEEeccC--------CCCC
Q 025454 100 GSVMPISGSDFVREVSQAPPDVWVVVILY--KDGFAECGLLMQCLEELARKY----PATKFVKIISTD--------CIPN 165 (252)
Q Consensus 100 G~v~eIs~~~f~~~V~~~~~~~~VVV~fy--a~wc~~Ck~l~~~l~~LA~ky----~~vkFvkI~~~~--------~~~~ 165 (252)
+.|..++..+|...+ +.+ .+|||.|| ||||+ |.|.|++||..| +.+.|++||+++ ++..
T Consensus 16 ~~v~~Lt~~nF~~vi-~~~--~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~ 88 (248)
T 2c0g_A 16 TGCVDLDELSFEKTV-ERF--PYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDR 88 (248)
T ss_dssp TTCEECCTTTHHHHH-TTS--SEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHH
T ss_pred CCcEECCHHHHHHHH-hcC--CCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHH
Confidence 458899999999965 332 68999999 99998 999999999987 469999999765 3478
Q ss_pred CCCC--cccEEEEEECCeE--EEEe--ecccccCCCCCHHHHHHHHHhc
Q 025454 166 YPDR--NLPTVLVYNNGAV--KANY--VGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 166 ~~i~--~lPTlliy~~G~~--v~~~--vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|+|+ ++|||++|+ |+. +..+ .|. .+.+.|..||.+.
T Consensus 89 ~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~------~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 89 YKVDDKNFPSIFLFK-GNADEYVQLPSHVD------VTLDNLKAFVSAN 130 (248)
T ss_dssp TTCCTTSCCEEEEES-SSSSSEEECCTTSC------CCHHHHHHHHHHH
T ss_pred hCCCcCCCCeEEEEe-CCcCcceeecccCC------CCHHHHHHHHHHh
Confidence 9999 999999999 973 4444 443 4678898888865
No 118
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.38 E-value=9.5e-13 Score=102.92 Aligned_cols=96 Identities=11% Similarity=0.160 Sum_probs=74.5
Q ss_pred EEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC--------------------
Q 025454 103 MPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD-------------------- 161 (252)
Q Consensus 103 ~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~-------------------- 161 (252)
..+++..+..... +++++||.||++||++|+.+.|.|.+++++|++ +.|+.|+.+.
T Consensus 15 ~~~~g~~~~~~~~---~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQLI---GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHHT---TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhhc---CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 3444444433332 346899999999999999999999999999987 9999997431
Q ss_pred ----------CCCCCCCCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 162 ----------CIPNYPDRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 162 ----------~~~~~~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+...|++.++||++++ ++|+++.++.|.. +.+.|+.+|.+
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~------~~~~l~~~l~~ 142 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGS------GMKMLEKRVNR 142 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCS------TTHHHHHHHHH
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCC------CHHHHHHHHHH
Confidence 2357999999999999 8999999988853 35666666654
No 119
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.37 E-value=3.5e-13 Score=110.20 Aligned_cols=97 Identities=15% Similarity=0.171 Sum_probs=69.9
Q ss_pred hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccC----CCCCCCC--CcccEEEEE-EC
Q 025454 108 SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTD----CIPNYPD--RNLPTVLVY-NN 179 (252)
Q Consensus 108 ~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~----~~~~~~i--~~lPTlliy-~~ 179 (252)
+.|.....+ +++|||.||++||++|+.+.|.|.+++..+. .+.|+.|+.+. ....|.+ .++||+++| ++
T Consensus 37 ~~~~~~~~~---~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~ 113 (164)
T 1sen_A 37 DGKKEAAAS---GLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPS 113 (164)
T ss_dssp HHHHHHHHH---TCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTT
T ss_pred HHHHHHHhc---CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCC
Confidence 444444433 3689999999999999999999999877654 37788887642 4567777 669999999 89
Q ss_pred CeEEEEeecccccC----CCCCHHHHHHHHHh
Q 025454 180 GAVKANYVGLRSFG----RRCTPEGVALVLCQ 207 (252)
Q Consensus 180 G~~v~~~vG~~~~G----~~~~~e~lE~~L~~ 207 (252)
|+++.+++|..... -..+.+.|...|.+
T Consensus 114 G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~ 145 (164)
T 1sen_A 114 GKVHPEIINENGNPSYKYFYVSAEQVVQGMKE 145 (164)
T ss_dssp SCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHH
T ss_pred CCEEEEEeCCCCccchhcccCCHHHHHHHHHH
Confidence 99999888864310 01455666555544
No 120
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.37 E-value=1e-12 Score=130.96 Aligned_cols=106 Identities=15% Similarity=0.107 Sum_probs=90.0
Q ss_pred CCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccCC---CCCCCCCcccEE
Q 025454 99 FGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTDC---IPNYPDRNLPTV 174 (252)
Q Consensus 99 fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~~---~~~~~i~~lPTl 174 (252)
.+.+..++.++|.+.+.+.+ ++|||.||++||++|+.+.|.|.+|+.+|. .+.|++|+++.. ...|+|.++||+
T Consensus 656 ~~~v~~l~~~~~~~~~~~~~--~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 733 (780)
T 3apo_A 656 PQASIDLTPQTFNEKVLQGK--THWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSV 733 (780)
T ss_dssp CCCSEEECHHHHHHHTTTCS--SCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccccccCCHHHHHHHHhcCC--CeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCHHHHHhcCCCcCCEE
Confidence 35688999999988886543 789999999999999999999999999995 599999998753 478999999999
Q ss_pred EEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 175 LVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 175 liy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
++|++|+.+.+++|.. +| ..+.+.|..+|.+.
T Consensus 734 ~~~~~g~~~~~~~G~~-~g-~~~~~~l~~~l~~~ 765 (780)
T 3apo_A 734 KLYQYERAKKSIWEEQ-IN-SRDAKTIAALIYGK 765 (780)
T ss_dssp EEEEEETTTTEEEEEE-EC-CCCHHHHHHHHHHH
T ss_pred EEEcCCCccccccCcc-cC-CcCHHHHHHHHHHH
Confidence 9999999998888852 11 35678898888875
No 121
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.37 E-value=1.8e-12 Score=103.33 Aligned_cols=83 Identities=12% Similarity=0.254 Sum_probs=68.1
Q ss_pred CCceEEEEEEcCCCchhhhH-HHHHHHHHHHCC--CceEEEEecc-----------------------------------
Q 025454 119 PDVWVVVILYKDGFAECGLL-MQCLEELARKYP--ATKFVKIIST----------------------------------- 160 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l-~~~l~~LA~ky~--~vkFvkI~~~----------------------------------- 160 (252)
+|++|||.||++||++|+.. .|.|.+++++|+ ++.|+.|+.+
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 35799999999999999995 999999999998 4899988742
Q ss_pred -CCCCCCCCCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 161 -DCIPNYPDRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 161 -~~~~~~~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
.+...|++.++||++++ ++|+++.++.|. .+.+.|+.+|.+
T Consensus 107 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~------~~~~~l~~~i~~ 149 (158)
T 3eyt_A 107 PRTMAAYQMRGTPSLLLIDKAGDLRAHHFGD------VSELLLGAEIAT 149 (158)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSEEEEEEESC------CCHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEEEEEeCC------CCHHHHHHHHHH
Confidence 12357999999988888 789999999885 346677776665
No 122
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.36 E-value=2.7e-12 Score=100.93 Aligned_cols=79 Identities=18% Similarity=0.281 Sum_probs=66.2
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHH---HHHHCC--CceEEEEeccCC---------------------------CCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEE---LARKYP--ATKFVKIISTDC---------------------------IPNY 166 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~---LA~ky~--~vkFvkI~~~~~---------------------------~~~~ 166 (252)
++++|||+||++||++|+.+.|.|.+ |.++|. ++.|+.|+.+.. ...|
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 35799999999999999999999999 998884 588888876432 5689
Q ss_pred CCCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 167 PDRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 167 ~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
++.++||++++ ++|+++.+.+| .++|+.+|.
T Consensus 110 ~v~~~P~~~lid~~G~i~~~~~~---------~~~l~~~l~ 141 (142)
T 3eur_A 110 DLRAIPTLYLLDKNKTVLLKDAT---------LQKVEQYLA 141 (142)
T ss_dssp CCTTCSEEEEECTTCBEEEEEEC---------HHHHHHHHH
T ss_pred CCCcCCeEEEECCCCcEEecCCC---------HHHHHHHHh
Confidence 99999999998 67999987765 477888875
No 123
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.36 E-value=1.6e-12 Score=103.27 Aligned_cols=84 Identities=13% Similarity=0.133 Sum_probs=70.2
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC---------------------------CCCCCC--
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYP--ATKFVKIISTD---------------------------CIPNYP-- 167 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~---------------------------~~~~~~-- 167 (252)
+|++|||.||++||++|+.+.|.|.+++++|. ++.|+.|+.+. +...|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 45799999999999999999999999999984 48899987641 225677
Q ss_pred CCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 168 DRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 168 i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+.++||++++ ++|+++.++.|. .+.+.|+.+|.+.
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~------~~~~~l~~~l~~l 138 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGE------VNEKSLTDAVKLA 138 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSC------CCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEEEECCC------CCHHHHHHHHHHH
Confidence 9999988888 789999998885 4578888888864
No 124
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.35 E-value=1.8e-13 Score=104.63 Aligned_cols=72 Identities=15% Similarity=0.148 Sum_probs=55.9
Q ss_pred ceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc-------CCCCCCCCCcccEEEEEECCeEEEEeecccccC
Q 025454 121 VWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST-------DCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFG 193 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~-------~~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G 193 (252)
+.+||.|||+||++|+.|.|.|.+++..|+ ++.++.+ ++...|+|+++||+++ +|+. +.|.
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~---~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~~---~~G~---- 80 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP---YVECSPNGPGTPQAQECTEAGITSYPTWII--NGRT---YTGV---- 80 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC---EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTEE---EESC----
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC---EEEEecccccchhHHHHHHcCCeEeCEEEE--CCEE---ecCC----
Confidence 467899999999999999999999998876 5555522 2347899999999877 8974 5554
Q ss_pred CCCCHHHHHHHHH
Q 025454 194 RRCTPEGVALVLC 206 (252)
Q Consensus 194 ~~~~~e~lE~~L~ 206 (252)
.+.+.|..++.
T Consensus 81 --~~~~~l~~~~~ 91 (106)
T 3kp8_A 81 --RSLEALAVASG 91 (106)
T ss_dssp --CCHHHHHHHHT
T ss_pred --CCHHHHHHHhC
Confidence 35677777764
No 125
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.35 E-value=1.9e-12 Score=102.62 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=71.0
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC-------------------------CCCCCCCCccc
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD-------------------------CIPNYPDRNLP 172 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~-------------------------~~~~~~i~~lP 172 (252)
+++|||.||++||++|+.+.|.|.+++++|+. +.|+.|+.+. +...|++.++|
T Consensus 26 gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 105 (151)
T 2f9s_A 26 GKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLP 105 (151)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCCC
Confidence 47999999999999999999999999999874 8999887642 23679999999
Q ss_pred EEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 173 TVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 173 Tlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|++++ ++|+++.++.|. .+.+.|..+|.+.
T Consensus 106 ~~~lid~~G~i~~~~~G~------~~~~~l~~~l~~l 136 (151)
T 2f9s_A 106 TTFLINPEGKVVKVVTGT------MTESMIHDYMNLI 136 (151)
T ss_dssp EEEEECTTSEEEEEEESC------CCHHHHHHHHHHH
T ss_pred eEEEECCCCcEEEEEeCC------CCHHHHHHHHHHH
Confidence 99988 799999998885 3578888888864
No 126
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.34 E-value=3.2e-12 Score=97.94 Aligned_cols=83 Identities=14% Similarity=0.207 Sum_probs=69.6
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEecc-------------------------------CCCCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIIST-------------------------------DCIPNY 166 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~-------------------------------~~~~~~ 166 (252)
++++|||.||++||++|+.+.+.|.+++++++. +.|+.|+.. .+...|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 357999999999999999999999999999874 889988421 123579
Q ss_pred CCCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 167 PDRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 167 ~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
++.++||++++ ++|+++.++.|. .+.+.|..+|.+
T Consensus 101 ~v~~~P~~~lid~~G~i~~~~~g~------~~~~~l~~~l~~ 136 (138)
T 4evm_A 101 GVRSYPTQAFIDKEGKLVKTHPGF------MEKDAILQTLKE 136 (138)
T ss_dssp TCCSSSEEEEECTTCCEEEEEESC------CCHHHHHHHHHH
T ss_pred CcccCCeEEEECCCCcEEEeecCC------CcHHHHHHHHHh
Confidence 99999999999 899999998885 357888888875
No 127
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.34 E-value=1.5e-12 Score=110.22 Aligned_cols=83 Identities=14% Similarity=0.173 Sum_probs=66.0
Q ss_pred hhHHHHHHcCCCCceEEEEEEcC-CCchhhhHHHHHHHHHHHCCCceEEEEeccC-----CCCCCCCCcccEEEEEECCe
Q 025454 108 SDFVREVSQAPPDVWVVVILYKD-GFAECGLLMQCLEELARKYPATKFVKIISTD-----CIPNYPDRNLPTVLVYNNGA 181 (252)
Q Consensus 108 ~~f~~~V~~~~~~~~VVV~fya~-wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~-----~~~~~~i~~lPTlliy~~G~ 181 (252)
+++...+....++..+||.||++ ||++|+.+.|.|+++|+.++.++|++||++. +...|+|+++||+++|++|+
T Consensus 10 ~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~ 89 (226)
T 1a8l_A 10 KVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGK 89 (226)
T ss_dssp HHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTTCTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTB
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhhCCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCc
Confidence 44444441222334678999999 9999999999999999888889999999765 35789999999999999998
Q ss_pred EE-EEeeccc
Q 025454 182 VK-ANYVGLR 190 (252)
Q Consensus 182 ~v-~~~vG~~ 190 (252)
.+ .++.|..
T Consensus 90 ~~~~~~~G~~ 99 (226)
T 1a8l_A 90 DFGVRYFGLP 99 (226)
T ss_dssp CCSEEEESCC
T ss_pred eeeEEEeccC
Confidence 75 6777753
No 128
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.34 E-value=2.8e-12 Score=101.69 Aligned_cols=82 Identities=17% Similarity=0.214 Sum_probs=71.6
Q ss_pred ceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEec----------------------------c--CCCCCCCCCc
Q 025454 121 VWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIS----------------------------T--DCIPNYPDRN 170 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~----------------------------~--~~~~~~~i~~ 170 (252)
++|||.||++||++|+.+.|.|.+++++| ++.|+.|+. . .+...|++.+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 109 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLG 109 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCc
Confidence 58999999999999999999999999999 999999987 1 2347899999
Q ss_pred ccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhcC
Q 025454 171 LPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQSD 209 (252)
Q Consensus 171 lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g 209 (252)
+|+++++ ++|+++..+.|. .+.++|+.+|.+..
T Consensus 110 ~P~~~lid~~G~i~~~~~g~------~~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 110 QPWTFVVDREGKVVALFAGR------AGREALLDALLLAG 143 (154)
T ss_dssp SCEEEEECTTSEEEEEEESB------CCHHHHHHHHHHTT
T ss_pred ccEEEEECCCCCEEEEEcCC------CCHHHHHHHHHhcc
Confidence 9997777 799999999885 46889999998864
No 129
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.33 E-value=5.3e-12 Score=109.72 Aligned_cols=92 Identities=11% Similarity=0.135 Sum_probs=71.0
Q ss_pred cChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHC-----CCceEEEEeccC---CCCCCCCCcccEEEE
Q 025454 105 ISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKY-----PATKFVKIISTD---CIPNYPDRNLPTVLV 176 (252)
Q Consensus 105 Is~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky-----~~vkFvkI~~~~---~~~~~~i~~lPTlli 176 (252)
++.+.+ +.+.+. .+..+|+.||++||++|+.+.|.|++++..| +++.|.+||++. +...|+|.++||+++
T Consensus 125 l~~~~~-~~~~~~-~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i 202 (243)
T 2hls_A 125 LEDATK-EALKSL-KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI 202 (243)
T ss_dssp CCHHHH-HHHHHC-CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCHHHH-HHHHHc-CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE
Confidence 444433 344433 2357799999999999999999999999998 789999999874 347899999999988
Q ss_pred EECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 177 YNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 177 y~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+|+.+ +.|. .+.++|..+|.+.
T Consensus 203 --~G~~~--~~G~------~~~~~l~~~l~~~ 224 (243)
T 2hls_A 203 --NGYLV--FVGV------PYEEDFLDYVKSA 224 (243)
T ss_dssp --TTEEE--EESC------CCHHHHHHHHHHH
T ss_pred --CCEEE--EeCC------CCHHHHHHHHHHH
Confidence 99864 5664 3567787777653
No 130
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.32 E-value=4e-12 Score=102.26 Aligned_cols=83 Identities=13% Similarity=0.181 Sum_probs=69.6
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc--------------------------------------
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST-------------------------------------- 160 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~-------------------------------------- 160 (252)
++++|||.||++||++|+.+.|.|.+++++|+++.|+.|+.+
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIM 115 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeE
Confidence 457999999999999999999999999999999999999765
Q ss_pred -----CCCCCCCCCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 161 -----DCIPNYPDRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 161 -----~~~~~~~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
.+...|++.++||++++ ++|+++. .|.. .+.+.|+.+|.+.
T Consensus 116 ~~d~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~-----~~~~~l~~~l~~l 162 (165)
T 3ha9_A 116 VMDDGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTT-----PSLGELESVIKSV 162 (165)
T ss_dssp EECCSHHHHHTTCCSSSEEEEEETTCCEEE--EEES-----CCHHHHHHHHHHC
T ss_pred EeChHHHHHHhCCCCceEEEEEcCCCcEEE--eCCC-----CCHHHHHHHHHHH
Confidence 22356899999999999 6899887 5542 1578888888763
No 131
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.32 E-value=3.1e-12 Score=101.12 Aligned_cols=86 Identities=19% Similarity=0.278 Sum_probs=72.0
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC-------------------------CCCCCCCCcc
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD-------------------------CIPNYPDRNL 171 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~-------------------------~~~~~~i~~l 171 (252)
++++|||.||++||++|+.+.+.|.+++.+|+. +.|+.|+.+. +...|++.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 347999999999999999999999999999986 8899887652 2256999999
Q ss_pred cEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 172 PTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 172 PTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
||++++ ++|+++.++.|... .+.+.|+.+|.+.
T Consensus 107 P~~~lid~~G~i~~~~~g~~~----~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRP----ADKEALEQQILAA 140 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCT----TTHHHHHHHHHHH
T ss_pred CeEEEECCCCCEEEEEccCCC----cCHHHHHHHHHHH
Confidence 998887 89999999998642 3568888888875
No 132
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.32 E-value=6e-12 Score=100.25 Aligned_cols=82 Identities=15% Similarity=0.217 Sum_probs=68.1
Q ss_pred CceEEEEEEcCCCchhhh-HHHHHHHHHHHCCC--ceEEEEecc-------------------------------C----
Q 025454 120 DVWVVVILYKDGFAECGL-LMQCLEELARKYPA--TKFVKIIST-------------------------------D---- 161 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~-l~~~l~~LA~ky~~--vkFvkI~~~-------------------------------~---- 161 (252)
|++|||.||++||++|+. +.|.|.+++++|++ +.|+.|+.+ .
T Consensus 30 gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (160)
T 3lor_A 30 GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRI 109 (160)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSS
T ss_pred CCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchh
Confidence 479999999999999999 79999999999985 899988641 1
Q ss_pred --CCCCCCCCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 162 --CIPNYPDRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 162 --~~~~~~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+...|++.++||++++ ++|+++.++.|. .+.+.|+..|.+
T Consensus 110 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~------~~~~~l~~~i~~ 152 (160)
T 3lor_A 110 PSTMKKYRLEGTPSIILADRKGRIRQVQFGQ------VDDFVLGLLLGS 152 (160)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSBEEEEEESC------CCHHHHHHHHHH
T ss_pred hhHHHhcccCccceEEEECCCCcEEEEecCc------CCHHHHHHHHHH
Confidence 3357999999999999 589999999886 346677777665
No 133
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.30 E-value=4.1e-13 Score=102.46 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=67.9
Q ss_pred hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC--------CCCCCCCCcccEEEEEEC
Q 025454 108 SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD--------CIPNYPDRNLPTVLVYNN 179 (252)
Q Consensus 108 ~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~--------~~~~~~i~~lPTlliy~~ 179 (252)
.++...+.+. +.|++ ||++||++|+.+.|.|..++..| .++.|+.+. +...|++.++||+ |.+
T Consensus 10 ~~~~~~~~~~---~~vv~-f~a~~C~~C~~~~~~l~~~~~~~---~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~ 80 (116)
T 2e7p_A 10 LKKAKELASS---APVVV-FSKTYCGYCNRVKQLLTQVGASY---KVVELDELSDGSQLQSALAHWTGRGTVPNV--FIG 80 (116)
T ss_dssp HHHHHHHHTS---SSEEE-EECTTCHHHHHHHHHHHHHTCCC---EEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EET
T ss_pred HHHHHHHHcC---CCEEE-EECCCChhHHHHHHHHHHcCCCe---EEEEccCCCChHHHHHHHHHHhCCCCcCEE--EEC
Confidence 3455555543 35666 99999999999999999987654 677776543 3467999999999 679
Q ss_pred CeEEEEeecccccCCCCCHHHHHHHHHhcCCCCCC
Q 025454 180 GAVKANYVGLRSFGRRCTPEGVALVLCQSDPVLND 214 (252)
Q Consensus 180 G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g~i~~~ 214 (252)
|+.+..+.|+..+ .+.+.|..+|.+.|++...
T Consensus 81 g~~v~~~~~~~~~---~~~~~l~~~l~~~g~~~k~ 112 (116)
T 2e7p_A 81 GKQIGGCDTVVEK---HQRNELLPLLQDAAATAKT 112 (116)
T ss_dssp TEEEECHHHHHHH---HHTTCHHHHHHHTTC----
T ss_pred CEEECChHHHHHH---HhCChHHHHHHHccccccc
Confidence 9999877776421 1235689999999887654
No 134
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.30 E-value=6.5e-12 Score=100.38 Aligned_cols=84 Identities=17% Similarity=0.262 Sum_probs=69.3
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccCC---CCCC---------------------------
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTDC---IPNY--------------------------- 166 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~~---~~~~--------------------------- 166 (252)
++++|||.||++||++|+.+.|.|.+++.+|+. +.|+.|+.+.. ...|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 347999999999999999999999999999986 89999986542 1222
Q ss_pred CCCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 167 PDRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 167 ~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
++.++||++++ ++|+++.++.|. .+.+.|+.+|.+.
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~------~~~~~l~~~l~~~ 149 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGP------RSKADFDRIVKMA 149 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSC------CCHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCC------CCHHHHHHHHHHH
Confidence 79999998888 799999988885 3577888887764
No 135
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.29 E-value=5.4e-12 Score=100.91 Aligned_cols=85 Identities=12% Similarity=0.133 Sum_probs=69.4
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHC--CCceEEEEecc-------------------------------CCCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKY--PATKFVKIIST-------------------------------DCIPN 165 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky--~~vkFvkI~~~-------------------------------~~~~~ 165 (252)
++++|||+||++||++|+.+.|.|.+++++| .++.|+-|..+ .+...
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 116 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQN 116 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHH
Confidence 4579999999999999999999999999986 45777777531 01256
Q ss_pred CCCCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhcC
Q 025454 166 YPDRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQSD 209 (252)
Q Consensus 166 ~~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g 209 (252)
|++.++||++++ ++|+++.++.|. .+.+.|+.+|.+..
T Consensus 117 ~~v~~~P~~~lid~~G~i~~~~~g~------~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 117 LNISVYPSWALIGKDGDVQRIVKGS------INEAQALALIRNPN 155 (164)
T ss_dssp TTCCSSSEEEEECTTSCEEEEEESC------CCHHHHHHHHHCTT
T ss_pred cCCCccceEEEECCCCcEEEEEcCC------CCHHHHHHHHHHHH
Confidence 899999999999 799999998885 35788999988753
No 136
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.29 E-value=5.5e-12 Score=98.68 Aligned_cols=80 Identities=15% Similarity=0.163 Sum_probs=66.3
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHC-CC--ceEEEEeccC----------------------------CCCCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKY-PA--TKFVKIISTD----------------------------CIPNYP 167 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky-~~--vkFvkI~~~~----------------------------~~~~~~ 167 (252)
++++|||.||++||++|+.+.|.|.+++++| +. +.|+.|+.+. +...|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4579999999999999999999999999999 54 8899886542 236899
Q ss_pred CCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 168 DRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 168 i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+.++||++++ ++|+++.+.. +.+.|+..|.+
T Consensus 112 v~~~P~~~lid~~G~i~~~~~---------~~~~l~~~l~~ 143 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKILARDI---------QGEALTGKLKE 143 (148)
T ss_dssp CCSSSEEEEECTTSBEEEESC---------CHHHHHHHHHH
T ss_pred CCCcCEEEEECCCCeEEEecC---------CHHHHHHHHHH
Confidence 9999999999 7999988765 35667776665
No 137
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.29 E-value=6e-12 Score=100.07 Aligned_cols=70 Identities=13% Similarity=0.219 Sum_probs=60.3
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC----------------------------CCCCCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD----------------------------CIPNYPD 168 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~----------------------------~~~~~~i 168 (252)
++++|||.||++||++|+.+.|.|.+++.+|+. +.|+.|+.+. +...|++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 347999999999999999999999999999976 8999987653 2357999
Q ss_pred CcccEEEEE-ECCeEEEEeec
Q 025454 169 RNLPTVLVY-NNGAVKANYVG 188 (252)
Q Consensus 169 ~~lPTlliy-~~G~~v~~~vG 188 (252)
.++||++++ ++|+++.++++
T Consensus 108 ~~~P~~~lid~~G~i~~~~~~ 128 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIVAKELR 128 (152)
T ss_dssp CSSCEEEEECTTSEEEEECCC
T ss_pred CcCCeEEEECCCCeEEEeeCC
Confidence 999999999 79999988643
No 138
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.28 E-value=6.8e-12 Score=99.31 Aligned_cols=86 Identities=13% Similarity=0.176 Sum_probs=70.1
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC--------------------------CCCCCCCCc
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD--------------------------CIPNYPDRN 170 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~--------------------------~~~~~~i~~ 170 (252)
++++|||.||++||++|+.+.+.|.+++.+|+. +.|+.|+.+. +...|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 347999999999999999999999999999986 8888887654 235699999
Q ss_pred ccEE-EEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 171 LPTV-LVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 171 lPTl-liy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+|++ ++.++|+++.++.|... .+...+..+|.+.
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~----~~~~~l~~~l~~l 141 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAME----WDHPEVIAFLNNE 141 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCC----TTSHHHHHHHHTC
T ss_pred CCeEEEECCCCcEEEEEcCCCc----cccHHHHHHHHHH
Confidence 9955 45589999999998743 3457788888763
No 139
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.26 E-value=7.4e-12 Score=98.89 Aligned_cols=84 Identities=14% Similarity=0.273 Sum_probs=70.0
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC--------------------------CCCCCCCCc
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD--------------------------CIPNYPDRN 170 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~--------------------------~~~~~~i~~ 170 (252)
+++++||.||++||++|+.+.|.|.+++++|++ +.|+.|+.+. +...|++.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 357999999999999999999999999999975 8899887542 235699999
Q ss_pred ccEEEEEE-CCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 171 LPTVLVYN-NGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 171 lPTlliy~-~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+||++++. +|+++.++.|. .+.+.|+.+|.+.
T Consensus 109 ~P~~~lid~~G~i~~~~~g~------~~~~~l~~~l~~~ 141 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTR------PSDPKTAEKFNEL 141 (152)
T ss_dssp SCCEEEECTTSCEEESSCCC------TTCHHHHHHHHHH
T ss_pred CCEEEEECCCCeEEEccCCC------CCHHHHHHHHHHH
Confidence 99999997 89999887764 3457788888764
No 140
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.25 E-value=5.5e-12 Score=97.16 Aligned_cols=74 Identities=18% Similarity=0.213 Sum_probs=62.5
Q ss_pred eEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEEEEEECCeEEEEeecccccCCCCCH
Q 025454 122 WVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTP 198 (252)
Q Consensus 122 ~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~ 198 (252)
.+|+.||++||++|+.+.+.|++++.+++ +.|.+||.++ +...|+++ +|||++|.+|+.+. .|. ++.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v~--~g~------~~~ 99 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKELC--HYF------LDS 99 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEEE--CSS------CCC
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEEE--ecC------CCH
Confidence 57999999999999999999999999986 9999999864 45789997 99999999999872 232 566
Q ss_pred HHHHHHH
Q 025454 199 EGVALVL 205 (252)
Q Consensus 199 e~lE~~L 205 (252)
+.|+.+|
T Consensus 100 ~~L~~~L 106 (107)
T 2fgx_A 100 DVIGAYL 106 (107)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7888776
No 141
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.24 E-value=7.7e-12 Score=97.86 Aligned_cols=72 Identities=14% Similarity=0.163 Sum_probs=62.5
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC----------------------------CCCCCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD----------------------------CIPNYPD 168 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~----------------------------~~~~~~i 168 (252)
++++|||.||++||++|+.+.|.|.+++++|+. +.|+.|+.+. +...|++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 457999999999999999999999999999976 8999997652 3356899
Q ss_pred CcccEEEEE-ECCeEEEEeeccc
Q 025454 169 RNLPTVLVY-NNGAVKANYVGLR 190 (252)
Q Consensus 169 ~~lPTlliy-~~G~~v~~~vG~~ 190 (252)
.++||++++ ++|+++.++.|..
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~~ 132 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGYE 132 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCGG
T ss_pred CCCCEEEEECCCCcEEEecCCHH
Confidence 999999999 7999999888763
No 142
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.23 E-value=9.3e-12 Score=98.28 Aligned_cols=70 Identities=13% Similarity=0.101 Sum_probs=59.3
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCC---CceEEEEeccC---------------------------CCCCCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYP---ATKFVKIISTD---------------------------CIPNYPD 168 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~---~vkFvkI~~~~---------------------------~~~~~~i 168 (252)
++++|||+||++||++|+.+.|.|.+++++|+ ++.|+.|+.+. +...|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 35799999999999999999999999999987 58888886542 2357999
Q ss_pred CcccEEEEEE--CCeEEEEeec
Q 025454 169 RNLPTVLVYN--NGAVKANYVG 188 (252)
Q Consensus 169 ~~lPTlliy~--~G~~v~~~vG 188 (252)
.++||++++. +|+++.+..+
T Consensus 107 ~~~Pt~~lid~~~G~i~~~~~~ 128 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDVVTTRAR 128 (146)
T ss_dssp CSSSEEEEEETTTCCEEESCHH
T ss_pred CCCCEEEEEECCCCeEEEecch
Confidence 9999999997 8999877644
No 143
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.23 E-value=1.3e-11 Score=97.51 Aligned_cols=82 Identities=12% Similarity=0.156 Sum_probs=66.7
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEecc--------------------------CCCCCCCCCcc
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIIST--------------------------DCIPNYPDRNL 171 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~--------------------------~~~~~~~i~~l 171 (252)
++++||.||++||++|+.+.|.|.+++.+|+. +.|+.|..+ .+...|++.++
T Consensus 28 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 107 (153)
T 2l5o_A 28 GKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQVY 107 (153)
T ss_dssp TCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCSS
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCcc
Confidence 46999999999999999999999999999975 788876521 12367899999
Q ss_pred cEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 172 PTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 172 PTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
||++++ .+|+++..+.|. .+.+.|..+|.+
T Consensus 108 P~~~lid~~G~i~~~~~g~------~~~~~l~~~l~~ 138 (153)
T 2l5o_A 108 PTSVLIGKKGEILKTYVGE------PDFGKLYQEIDT 138 (153)
T ss_dssp SEEEEECSSSCCCEEEESS------CCHHHHHHHHHH
T ss_pred CeEEEECCCCcEEEEEcCC------CCHHHHHHHHHH
Confidence 999999 789999988875 345666666654
No 144
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.23 E-value=1.1e-11 Score=98.08 Aligned_cols=80 Identities=21% Similarity=0.257 Sum_probs=63.1
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC--------------------------CCCCCCCCcccE
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD--------------------------CIPNYPDRNLPT 173 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~--------------------------~~~~~~i~~lPT 173 (252)
++++||.||++||++|+.+.|.|.+++.+ +.+.|+.|+.+. +...|++.++||
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 120 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPE 120 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSCE
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccCe
Confidence 46899999999999999999999999887 669999987531 125699999995
Q ss_pred EEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 174 VLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 174 lliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
++++ ++|+++.++.|.. +.+.+..+|.
T Consensus 121 ~~~id~~G~i~~~~~g~~------~~~~l~~~l~ 148 (156)
T 1kng_A 121 TFVVGREGTIVYKLVGPI------TPDNLRSVLL 148 (156)
T ss_dssp EEEECTTSBEEEEEESCC------CHHHHHHTHH
T ss_pred EEEEcCCCCEEEEEeCCC------CHHHHHHHHH
Confidence 5554 8999999988863 3555555554
No 145
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.23 E-value=1.1e-11 Score=97.59 Aligned_cols=68 Identities=9% Similarity=0.090 Sum_probs=58.1
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCC---CceEEEEeccC---------------------------CCCCCCCC
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYP---ATKFVKIISTD---------------------------CIPNYPDR 169 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~---~vkFvkI~~~~---------------------------~~~~~~i~ 169 (252)
+++|||+||++||++|+.+.|.|.+++++|+ ++.|+.|+.+. +...|++.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (144)
T 1i5g_A 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK 107 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCC
Confidence 4799999999999999999999999999997 48888886543 23578999
Q ss_pred cccEEEEEE--CCeEEEEee
Q 025454 170 NLPTVLVYN--NGAVKANYV 187 (252)
Q Consensus 170 ~lPTlliy~--~G~~v~~~v 187 (252)
++||++++. +|+++.+..
T Consensus 108 ~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 108 SIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp SSSEEEEEETTTCCEEESCH
T ss_pred CCCEEEEEECCCCcEEeccc
Confidence 999999996 899887654
No 146
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.23 E-value=2e-11 Score=97.74 Aligned_cols=72 Identities=15% Similarity=0.301 Sum_probs=62.4
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC----------------------CCCCCCCCcccEEE
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYP--ATKFVKIISTD----------------------CIPNYPDRNLPTVL 175 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~----------------------~~~~~~i~~lPTll 175 (252)
+++|||.||++||++|+.+.|.|.+++++|+ ++.|+.|+.+. +...|++.++||++
T Consensus 41 gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~ 120 (158)
T 3hdc_A 41 GKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTF 120 (158)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEEE
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceEE
Confidence 4799999999999999999999999999998 58999887654 22679999999966
Q ss_pred EE-ECCeEEEEeecccc
Q 025454 176 VY-NNGAVKANYVGLRS 191 (252)
Q Consensus 176 iy-~~G~~v~~~vG~~~ 191 (252)
++ ++|+++.++.|...
T Consensus 121 lid~~G~i~~~~~G~~~ 137 (158)
T 3hdc_A 121 IVDRKGIIRQRVTGGIE 137 (158)
T ss_dssp EECTTSBEEEEEESCCC
T ss_pred EEcCCCCEEEEEeCCCc
Confidence 66 79999999999754
No 147
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.22 E-value=1.1e-11 Score=100.09 Aligned_cols=80 Identities=18% Similarity=0.157 Sum_probs=62.8
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC--------------------------CCCCCCCCccc
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD--------------------------CIPNYPDRNLP 172 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~--------------------------~~~~~~i~~lP 172 (252)
++++|||.||++||++|+.+.|.|.+++++ ++.|+.|+.+. +...|++.++|
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 127 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAP 127 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccccC
Confidence 457999999999999999999999999987 78888887321 22568999999
Q ss_pred -EEEEEECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 173 -TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 173 -Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
++++.++|+++.++.|.. +.+.++.+|.
T Consensus 128 ~~~lid~~G~i~~~~~g~~------~~~~l~~~l~ 156 (168)
T 2b1k_A 128 ETFLIDGNGIIRYRHAGDL------NPRVWEEEIK 156 (168)
T ss_dssp EEEEECTTSBEEEEEESCC------CHHHHHHTTH
T ss_pred EEEEECCCCeEEEEEeCCC------CHHHHHHHHH
Confidence 566667999999998853 3555555444
No 148
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.22 E-value=3.3e-11 Score=94.23 Aligned_cols=81 Identities=14% Similarity=0.231 Sum_probs=65.6
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHH---HHHHCC--CceEEEEeccCC---------------------------CCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEE---LARKYP--ATKFVKIISTDC---------------------------IPNY 166 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~---LA~ky~--~vkFvkI~~~~~---------------------------~~~~ 166 (252)
+|++|||.||++||++|+.+.|.|.+ +.++|+ ++.|+.|+.+.. ...|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 45799999999999999999999988 888874 488998876521 3489
Q ss_pred CCCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 167 PDRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 167 ~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
++.++||++++ ++|+++.+ ..+.++|+.+|.+.
T Consensus 106 ~v~~~P~~~lid~~G~i~~~---------~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKRVILK---------DTSMEQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTCBEEEC---------SCCHHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCCEEec---------CCCHHHHHHHHHHH
Confidence 99999999999 68988762 24578899888753
No 149
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.22 E-value=1.2e-11 Score=99.06 Aligned_cols=83 Identities=22% Similarity=0.227 Sum_probs=66.6
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC--------------------------CCCCCCCCcc
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD--------------------------CIPNYPDRNL 171 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~--------------------------~~~~~~i~~l 171 (252)
|++|||.||++||++|+...|.|.+++++|++ +.|+.|+.+. +...|++.++
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~ 114 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTNL 114 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCSC
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcccC
Confidence 46999999999999999999999999999975 8899886542 3356899999
Q ss_pred cEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 172 PTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 172 PTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
||++++ ++|+++.++.|..++ .+.+...|..
T Consensus 115 P~~~lid~~G~i~~~~~g~~~~-----e~~~~~~~~~ 146 (152)
T 2lrt_A 115 PSVFLVNRNNELSARGENIKDL-----DEAIKKLLEG 146 (152)
T ss_dssp SEEEEEETTTEEEEETTTCSCH-----HHHHHHHHGG
T ss_pred ceEEEECCCCeEEEecCCHHHH-----HHHHHHHHhc
Confidence 999999 689999998886542 3444444444
No 150
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.21 E-value=1.1e-11 Score=97.16 Aligned_cols=69 Identities=17% Similarity=0.175 Sum_probs=58.3
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCC---CceEEEEeccC---------------------------CCCCCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYP---ATKFVKIISTD---------------------------CIPNYPD 168 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~---~vkFvkI~~~~---------------------------~~~~~~i 168 (252)
++++|||.||++||++|+.+.|.|.+++++|+ ++.|+.|+.+. +...|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 35799999999999999999999999999987 58888886543 2256899
Q ss_pred CcccEEEEEE--CCeEEEEee
Q 025454 169 RNLPTVLVYN--NGAVKANYV 187 (252)
Q Consensus 169 ~~lPTlliy~--~G~~v~~~v 187 (252)
.++||++++. +|+++.+..
T Consensus 107 ~~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 107 ESIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp CSSSEEEEEETTTCCEEESCH
T ss_pred CCCCEEEEEECCCCeEEecch
Confidence 9999999998 899887654
No 151
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.18 E-value=3.1e-11 Score=95.69 Aligned_cols=69 Identities=13% Similarity=0.163 Sum_probs=59.1
Q ss_pred CCceEEEEEEcCCCch--hhhHHHHHHHHHHHC---CCceEEEEeccC----------------------------CCCC
Q 025454 119 PDVWVVVILYKDGFAE--CGLLMQCLEELARKY---PATKFVKIISTD----------------------------CIPN 165 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~--Ck~l~~~l~~LA~ky---~~vkFvkI~~~~----------------------------~~~~ 165 (252)
+|++|||+||++||++ |+.+.|.|.++.++| .++.|+.|+.+. +...
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4579999999999999 999999999999998 458899886542 2257
Q ss_pred CCCCcccEEEEE-ECCeEEEEee
Q 025454 166 YPDRNLPTVLVY-NNGAVKANYV 187 (252)
Q Consensus 166 ~~i~~lPTlliy-~~G~~v~~~v 187 (252)
|++.++||++++ ++|+++.+++
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~~~ 134 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILAKNL 134 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEEESC
T ss_pred cCCCccCeEEEECCCCEEEEccC
Confidence 999999999999 7899998775
No 152
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.17 E-value=2.7e-11 Score=95.28 Aligned_cols=80 Identities=18% Similarity=0.150 Sum_probs=64.3
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC-----------------------------CCCCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD-----------------------------CIPNYP 167 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~-----------------------------~~~~~~ 167 (252)
+|++|||+||++||++|+.+.|.|.++.++|+. +.|+.|+.+. +...|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 457999999999999999999999999999974 8888886541 114589
Q ss_pred CCcccEEEEEE-CCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 168 DRNLPTVLVYN-NGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 168 i~~lPTlliy~-~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+.++||++++. +|+++.+.++ .++++.+|.+
T Consensus 111 v~~~P~~~lid~~G~i~~~~~~---------~~~l~~~l~~ 142 (143)
T 4fo5_A 111 LRKGFKNFLINDEGVIIAANVT---------PEKLTEILKA 142 (143)
T ss_dssp GGGCCCEEEECTTSBEEEESCC---------HHHHHHHHTC
T ss_pred CCCCCcEEEECCCCEEEEccCC---------HHHHHHHHHh
Confidence 99999887775 8999876543 5677777753
No 153
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.17 E-value=3.3e-11 Score=98.75 Aligned_cols=83 Identities=17% Similarity=0.183 Sum_probs=64.7
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--c------eEEEEeccC-C---CCC---------------------
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--T------KFVKIISTD-C---IPN--------------------- 165 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--v------kFvkI~~~~-~---~~~--------------------- 165 (252)
++++|||+||++||++|+.+.|.|.+++++|+. + .|+.|+.+. . ..+
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 347999999999999999999999999999865 7 999997654 1 111
Q ss_pred ----CCCCcccE-EEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 166 ----YPDRNLPT-VLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 166 ----~~i~~lPT-lliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|++.++|+ ++|.++|+++.++.|. .+.++|..+|.+
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~------~~~~~l~~~l~~ 178 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLRE------VTSKDVLDVALP 178 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSC------CCHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCC------CCHHHHHHHHHH
Confidence 36899995 5555899999988875 356777777664
No 154
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.16 E-value=2.2e-11 Score=90.18 Aligned_cols=70 Identities=14% Similarity=0.150 Sum_probs=58.6
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHH
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEG 200 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~ 200 (252)
|+.||++||++|+.+.|.|++++..| |.+||.++ +..+|+++ +||+++ .+|+.+. |. ++.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~---g~------~~~~~ 67 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD---WP------FDAPR 67 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE---SC------CCHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe---CC------CCHHH
Confidence 67899999999999999999988765 78888864 45789998 999999 9998874 32 56889
Q ss_pred HHHHHHhc
Q 025454 201 VALVLCQS 208 (252)
Q Consensus 201 lE~~L~~~ 208 (252)
|+.+|.+.
T Consensus 68 L~~~l~~~ 75 (87)
T 1ttz_A 68 LRAWLDAA 75 (87)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 99999764
No 155
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.15 E-value=5e-11 Score=96.99 Aligned_cols=70 Identities=14% Similarity=0.134 Sum_probs=58.4
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCC---CceEEEEeccC---------------------------CCCCCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYP---ATKFVKIISTD---------------------------CIPNYPD 168 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~---~vkFvkI~~~~---------------------------~~~~~~i 168 (252)
++++|||.||++||++|+.+.|.|.+++++|+ ++.|+.|+.+. +...|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 35799999999999999999999999999997 37888886542 2357899
Q ss_pred CcccEEEEEE--CCeEEEEeec
Q 025454 169 RNLPTVLVYN--NGAVKANYVG 188 (252)
Q Consensus 169 ~~lPTlliy~--~G~~v~~~vG 188 (252)
.++||++|+. +|+++.+..+
T Consensus 127 ~~~Pt~~lid~~~G~iv~~~~~ 148 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDTVTTRAR 148 (165)
T ss_dssp CSSSEEEEEETTTCCEEESCHH
T ss_pred CCCCEEEEEeCCCCEEEecccH
Confidence 9999999998 4999887553
No 156
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.72 E-value=6.2e-12 Score=98.16 Aligned_cols=67 Identities=10% Similarity=0.217 Sum_probs=56.4
Q ss_pred Cc-eEEEEEEcCCCchhhhHHHHHHHHHHHC----CCceEEEEecc----------------------------CCCCCC
Q 025454 120 DV-WVVVILYKDGFAECGLLMQCLEELARKY----PATKFVKIIST----------------------------DCIPNY 166 (252)
Q Consensus 120 ~~-~VVV~fya~wc~~Ck~l~~~l~~LA~ky----~~vkFvkI~~~----------------------------~~~~~~ 166 (252)
++ +|||+||++||++|+.+.|.|.+++++| +++.|+.|+.+ .+...|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 46 8999999999999999999999999998 46777777543 244679
Q ss_pred CCCcccEEEEEE-CCeEEEEe
Q 025454 167 PDRNLPTVLVYN-NGAVKANY 186 (252)
Q Consensus 167 ~i~~lPTlliy~-~G~~v~~~ 186 (252)
++.++||++++. +|+++.+.
T Consensus 105 ~v~~~P~~~lid~~G~i~~~~ 125 (143)
T 2lus_A 105 GITGIPALVIVKKDGTLISMN 125 (143)
Confidence 999999999997 89988764
No 157
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.10 E-value=1.1e-10 Score=107.30 Aligned_cols=71 Identities=14% Similarity=0.233 Sum_probs=61.3
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEecc------------------------------CCCCCCC
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIIST------------------------------DCIPNYP 167 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~------------------------------~~~~~~~ 167 (252)
+++|||+||++||++|+.+.|.|.+++++|++ +.|+.|+.+ .+...|+
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 57999999999999999999999999999974 899998753 1235799
Q ss_pred CCcccEEEEE-ECCeEEEEeeccc
Q 025454 168 DRNLPTVLVY-NNGAVKANYVGLR 190 (252)
Q Consensus 168 i~~lPTlliy-~~G~~v~~~vG~~ 190 (252)
|.++||++|+ ++|+++.++.|..
T Consensus 162 V~~~Pt~~lID~~G~Iv~~~~G~~ 185 (352)
T 2hyx_A 162 NRYWPAEYLIDATGTVRHIKFGEG 185 (352)
T ss_dssp CCEESEEEEECTTSBEEEEEESBC
T ss_pred CCccCEEEEEeCCCeEEEEEcCCC
Confidence 9999998888 8999999998853
No 158
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.10 E-value=1.2e-10 Score=95.63 Aligned_cols=79 Identities=15% Similarity=0.120 Sum_probs=61.8
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC--------------------------CCCCCCCCcccE
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD--------------------------CIPNYPDRNLPT 173 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~--------------------------~~~~~~i~~lPT 173 (252)
+++|||.||++||++|+.+.|.|.+++++ ++.|+.|+.++ +...|++.++|+
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 135 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAPE 135 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSCE
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCCe
Confidence 47899999999999999999999999988 78888887421 124689999996
Q ss_pred EEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 174 VLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 174 lliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
++++ ++|+++.++.|.. +.+.++..|.
T Consensus 136 ~~lid~~G~i~~~~~g~~------~~~~l~~~l~ 163 (176)
T 3kh7_A 136 TYLIDKQGIIRHKIVGVV------DQKVWREQLA 163 (176)
T ss_dssp EEEECTTCBEEEEEESCC------CHHHHHHHTH
T ss_pred EEEECCCCeEEEEEcCCC------CHHHHHHHHH
Confidence 6655 7899999998863 3455544443
No 159
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.09 E-value=1.2e-10 Score=98.91 Aligned_cols=81 Identities=14% Similarity=0.139 Sum_probs=63.5
Q ss_pred hhHHHHH-HcCCCCceEEEEEE-----cCCCchhhhHHHHHHHHHHHC---CCceEEEEeccC---CCCCCCCCcccEEE
Q 025454 108 SDFVREV-SQAPPDVWVVVILY-----KDGFAECGLLMQCLEELARKY---PATKFVKIISTD---CIPNYPDRNLPTVL 175 (252)
Q Consensus 108 ~~f~~~V-~~~~~~~~VVV~fy-----a~wc~~Ck~l~~~l~~LA~ky---~~vkFvkI~~~~---~~~~~~i~~lPTll 175 (252)
+++...+ .+.. .+|+|.|| +|||++|+.+.|.|.++|..+ +.++|++||++. +..+|+|+++|||+
T Consensus 9 ~~l~~~~~~~~~--~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~ 86 (229)
T 2ywm_A 9 MQLKELAQKEFK--EPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIV 86 (229)
T ss_dssp HHHHHHHHHHCC--SCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEE
T ss_pred HHHHHHHHHhcc--CCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEE
Confidence 4444445 2332 35666666 899999999999999998776 459999999864 45899999999999
Q ss_pred EEECCeEEEEeeccc
Q 025454 176 VYNNGAVKANYVGLR 190 (252)
Q Consensus 176 iy~~G~~v~~~vG~~ 190 (252)
+|++|....++.|..
T Consensus 87 ~~~~~~~~~~~~G~~ 101 (229)
T 2ywm_A 87 IEGDKDYGIRYIGLP 101 (229)
T ss_dssp EESSSCCCEEEESCC
T ss_pred EECCCcccceecCCc
Confidence 999888888888864
No 160
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.09 E-value=6.7e-11 Score=98.41 Aligned_cols=77 Identities=13% Similarity=0.086 Sum_probs=60.5
Q ss_pred ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHH-HH--HHHHHHCC-CceEEEEeccCC---CCCC--------CCCc
Q 025454 106 SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQ-CL--EELARKYP-ATKFVKIISTDC---IPNY--------PDRN 170 (252)
Q Consensus 106 s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~-~l--~~LA~ky~-~vkFvkI~~~~~---~~~~--------~i~~ 170 (252)
+.+.|.....+. ++|||.||++||++|+.|.+ .| .++++.+. ++.|++||.++. ...| ++.+
T Consensus 28 ~~ea~~~A~~~~---KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g 104 (173)
T 3ira_A 28 GEEAFEKARKEN---KPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGG 104 (173)
T ss_dssp SHHHHHHHHHHT---CCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CHHHHHHHHHhC---CCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCC
Confidence 467777766543 69999999999999999999 33 45665553 488999998753 3456 8999
Q ss_pred ccEEEEEE-CCeEEEE
Q 025454 171 LPTVLVYN-NGAVKAN 185 (252)
Q Consensus 171 lPTlliy~-~G~~v~~ 185 (252)
+||+++|. +|+++..
T Consensus 105 ~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 105 WPLNIIMTPGKKPFFA 120 (173)
T ss_dssp SSEEEEECTTSCEEEE
T ss_pred CcceeeECCCCCceee
Confidence 99999997 8998875
No 161
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.08 E-value=3.7e-10 Score=92.55 Aligned_cols=85 Identities=19% Similarity=0.186 Sum_probs=65.3
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCC--CceEEEEeccCC--------CCCCCC--------------------
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYP--ATKFVKIISTDC--------IPNYPD-------------------- 168 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~~--------~~~~~i-------------------- 168 (252)
+|++|||+||++||++|+.+.|.|.++.++|. ++.|+.|+.+.. ..++++
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 35799999999999999999999999999987 588888876532 133444
Q ss_pred ---CcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 169 ---RNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 169 ---~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
.++||++++ ++|+++.++.|... .+.++|..+|.+
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~----~~~~~l~~~l~~ 177 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAE----WASEDALKLIRA 177 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCC----TTSHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCc----cCHHHHHHHHHH
Confidence 289999888 78999999988643 234555555554
No 162
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.08 E-value=1.4e-10 Score=95.37 Aligned_cols=67 Identities=18% Similarity=0.272 Sum_probs=57.9
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC--------------------------------CCCC
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD--------------------------------CIPN 165 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~--------------------------------~~~~ 165 (252)
++++|||+||++||++|+.+.|.|.+++++|.+ +.|+.|+.+. +...
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 357999999999999999999999999999988 8888887621 2357
Q ss_pred CCCCcccEEEEE-ECCeEEEE
Q 025454 166 YPDRNLPTVLVY-NNGAVKAN 185 (252)
Q Consensus 166 ~~i~~lPTlliy-~~G~~v~~ 185 (252)
|++.++||++|+ ++|+++.+
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 112 YRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp TTCCEESEEEEECTTCBEEEE
T ss_pred cCCCCCCeEEEECCCCcEEEE
Confidence 999999999999 78998877
No 163
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.07 E-value=5.2e-10 Score=107.01 Aligned_cols=91 Identities=19% Similarity=0.192 Sum_probs=69.2
Q ss_pred EcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC---CCCCCCCCcccEEEEEECC
Q 025454 104 PISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD---CIPNYPDRNLPTVLVYNNG 180 (252)
Q Consensus 104 eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~---~~~~~~i~~lPTlliy~~G 180 (252)
.++.+ +.+.+.+.. +...|+.||++||++|+.+.|.|++++..|+.++|.+||.+. +..+|+|.++||+++ ||
T Consensus 103 ~~~~~-~~~~i~~~~-~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g 178 (521)
T 1hyu_A 103 KEAQS-LLEQIRDID-GDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITERNVMGVPAVFV--NG 178 (521)
T ss_dssp CSCHH-HHHHHHHCC-SCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCSSSEEEE--TT
T ss_pred CCCHH-HHHHHHhcC-CCcceEEEECCCCcCcHHHHHHHHHHHhHcCceEEEEEechhhHHHHHHhCCCccCEEEE--CC
Confidence 34444 444444332 347799999999999999999999999999999999999875 457899999999977 99
Q ss_pred eEEEEeecccccCCCCCHHHHHHHHH
Q 025454 181 AVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 181 ~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
+.+.+ |. .+.+.|..+|.
T Consensus 179 ~~~~~--G~------~~~~~l~~~l~ 196 (521)
T 1hyu_A 179 KEFGQ--GR------MTLTEIVAKVD 196 (521)
T ss_dssp EEEEE--SC------CCHHHHHHHHC
T ss_pred EEEec--CC------CCHHHHHHHHh
Confidence 98854 43 34455555554
No 164
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.07 E-value=7.4e-10 Score=100.26 Aligned_cols=114 Identities=9% Similarity=0.065 Sum_probs=88.8
Q ss_pred cCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC-----CCCCCCCCc
Q 025454 97 SRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD-----CIPNYPDRN 170 (252)
Q Consensus 97 ~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~-----~~~~~~i~~ 170 (252)
...+.|.+++.++|...+.... ..++|.||++||++|+.+.+.|.++|++|.+ +.|+.||++. +...|+|..
T Consensus 114 ~~~p~v~~~~~~~~~~~~~~~~--~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~ 191 (361)
T 3uem_A 114 NQLPLVIEFTEQTAPKIFGGEI--KTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKK 191 (361)
T ss_dssp HSSCSEEECSTTTHHHHHSCSC--CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCT
T ss_pred cCCCcceecCcccHHHHhcCCC--CcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCc
Confidence 4456799999999998776543 4788999999999999999999999999976 9999999872 357899988
Q ss_pred --ccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc--CCCCCCC
Q 025454 171 --LPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS--DPVLNDG 215 (252)
Q Consensus 171 --lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~--g~i~~~~ 215 (252)
+||+++|..|.....+.- .+..++.+.|..|+... |-+....
T Consensus 192 ~~~P~~~~~~~~~~~~ky~~---~~~~~~~~~l~~fi~~~l~g~~~~~~ 237 (361)
T 3uem_A 192 EECPAVRLITLEEEMTKYKP---ESEELTAERITEFCHRFLEGKIKPHL 237 (361)
T ss_dssp TTCSEEEEEECC--CCEECC---SSCCCCHHHHHHHHHHHHTTCSCCCC
T ss_pred cCCccEEEEEcCCcccccCC---CccccCHHHHHHHHHHHhcCCCcccc
Confidence 999999999765544431 12457899999999873 5554433
No 165
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.07 E-value=3e-10 Score=91.33 Aligned_cols=85 Identities=15% Similarity=0.147 Sum_probs=67.4
Q ss_pred CCceEEEEEEcCCCch-hhhHHHHHHHHHHHCC-----CceEEEEeccCC------------------------------
Q 025454 119 PDVWVVVILYKDGFAE-CGLLMQCLEELARKYP-----ATKFVKIISTDC------------------------------ 162 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~-Ck~l~~~l~~LA~ky~-----~vkFvkI~~~~~------------------------------ 162 (252)
++++|||.||++||++ |+.+.|.|.++.++|+ ++.|+.|+.+..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4579999999999997 9999999999999998 689999975421
Q ss_pred ----------------CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 163 ----------------IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 163 ----------------~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
...|.+..+||++++.+|+++..+.|.. ..+.+.|...|.+
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~----~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDK----AEATDRVVADLQA 170 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHH----HTCHHHHHHHHHH
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCC----CCCHHHHHHHHHH
Confidence 1124467899999999999999988863 1256777777764
No 166
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.06 E-value=3e-10 Score=91.40 Aligned_cols=82 Identities=17% Similarity=0.216 Sum_probs=63.4
Q ss_pred CCceEEEEEEcCCCch-hhhHHHHHHHHHHHC------CCceEEEEeccC------------------------------
Q 025454 119 PDVWVVVILYKDGFAE-CGLLMQCLEELARKY------PATKFVKIISTD------------------------------ 161 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~-Ck~l~~~l~~LA~ky------~~vkFvkI~~~~------------------------------ 161 (252)
+|++|||.||++||++ |+...|.|.++.++| .++.|+.|..+.
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3579999999999998 999999999999988 478888886541
Q ss_pred -CCCCCCCCccc---------------E-EEEEECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 162 -CIPNYPDRNLP---------------T-VLVYNNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 162 -~~~~~~i~~lP---------------T-lliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
+...|++..+| + ++|-++|+++..+.|.. +.++|...|.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~------~~~~l~~~l~ 160 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSR------SAEQISDSVR 160 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSC------CHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCC------CHHHHHHHHH
Confidence 22468888888 5 55558999999988753 4555555444
No 167
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.03 E-value=6.5e-10 Score=88.65 Aligned_cols=82 Identities=10% Similarity=0.106 Sum_probs=64.1
Q ss_pred CceEEEEEEcCCCch-hhhHHHHHHHHHHHCC------CceEEEEeccC-------------------------------
Q 025454 120 DVWVVVILYKDGFAE-CGLLMQCLEELARKYP------ATKFVKIISTD------------------------------- 161 (252)
Q Consensus 120 ~~~VVV~fya~wc~~-Ck~l~~~l~~LA~ky~------~vkFvkI~~~~------------------------------- 161 (252)
|++|||.||++||++ |+...|.|.++.++|. ++.|+.|..+.
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 102 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 102 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 579999999999998 9999999999998873 68888886532
Q ss_pred CCCCCCCCccc----------------EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 162 CIPNYPDRNLP----------------TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 162 ~~~~~~i~~lP----------------Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+...|++..+| +++|.++|+++..+.|. .+.++|...|.+
T Consensus 103 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~------~~~~~l~~~l~~ 158 (164)
T 2ggt_A 103 VARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQN------KRKGEIAASIAT 158 (164)
T ss_dssp HHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETT------CCHHHHHHHHHH
T ss_pred HHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCC------CCHHHHHHHHHH
Confidence 23579999999 56666899999988774 345666555543
No 168
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.02 E-value=2.7e-10 Score=94.02 Aligned_cols=86 Identities=20% Similarity=0.145 Sum_probs=64.5
Q ss_pred eEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC--------------------------------CCCCCC
Q 025454 122 WVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD--------------------------------CIPNYP 167 (252)
Q Consensus 122 ~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~--------------------------------~~~~~~ 167 (252)
+|||+||++||++|+.+.|.|.+++.+|++ +.|+.|+.+. +...|+
T Consensus 48 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 127 (196)
T 2ywi_A 48 ATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYD 127 (196)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhC
Confidence 599999999999999999999999999974 8999997631 235789
Q ss_pred CCcccEEEEE-ECCeEEEEeecccc---cCCCCCHHHHHHHHHh
Q 025454 168 DRNLPTVLVY-NNGAVKANYVGLRS---FGRRCTPEGVALVLCQ 207 (252)
Q Consensus 168 i~~lPTlliy-~~G~~v~~~vG~~~---~G~~~~~e~lE~~L~~ 207 (252)
+.++||++++ ++|+++.+..+-.. +....+.++|+..|.+
T Consensus 128 v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 171 (196)
T 2ywi_A 128 AACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDA 171 (196)
T ss_dssp CCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHH
Confidence 9999999998 68999887443211 1112345566655554
No 169
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.58 E-value=3.1e-11 Score=96.44 Aligned_cols=83 Identities=13% Similarity=0.102 Sum_probs=62.8
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHH-HHHHCC---CceEEEEeccC---CCCCC----------------------C--
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEE-LARKYP---ATKFVKIISTD---CIPNY----------------------P-- 167 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~-LA~ky~---~vkFvkI~~~~---~~~~~----------------------~-- 167 (252)
++++|||.||++||++|+.+.|.|.+ +..+|. ++.|+.|+.+. ...+| +
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 34789999999999999999999998 888876 48888886542 12222 2
Q ss_pred CCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 168 DRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 168 i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+.++||++++ ++|+++.++.|. +..+++.+|.+.
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g~-------~~~~l~~~l~~l 146 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRLY-------NEEEFASLVQQI 146 (159)
Confidence 5679999998 899999888764 244566666553
No 170
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.99 E-value=4.9e-10 Score=97.25 Aligned_cols=79 Identities=13% Similarity=0.242 Sum_probs=64.5
Q ss_pred hhhHHHHHHcCCCCceEEEEEEcCC--CchhhhHHHHHHHHHHHCCC------ceEEEEeccC---CCCCCCCCcccEEE
Q 025454 107 GSDFVREVSQAPPDVWVVVILYKDG--FAECGLLMQCLEELARKYPA------TKFVKIISTD---CIPNYPDRNLPTVL 175 (252)
Q Consensus 107 ~~~f~~~V~~~~~~~~VVV~fya~w--c~~Ck~l~~~l~~LA~ky~~------vkFvkI~~~~---~~~~~~i~~lPTll 175 (252)
..+|...+..- +.+|+|+||++| |++|+.|.+.+.++|+.++. ++|+++|+++ +...|+|+++|||+
T Consensus 14 ~~ql~~~~~~~--~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~ 91 (243)
T 2hls_A 14 RRELRETLAEM--VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVA 91 (243)
T ss_dssp HHHHHHHHTTC--CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred HHHHHHHHHhC--CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEE
Confidence 34555555433 368999999999 99999999999999999876 9999999864 35789999999999
Q ss_pred EEECCeEEEEeeccc
Q 025454 176 VYNNGAVKANYVGLR 190 (252)
Q Consensus 176 iy~~G~~v~~~vG~~ 190 (252)
+| +| ..++.|..
T Consensus 92 i~-~g--~~~~~G~~ 103 (243)
T 2hls_A 92 FL-GG--EVRWTGIP 103 (243)
T ss_dssp ET-TT--TEEEESCC
T ss_pred EE-CC--ceeEcCCC
Confidence 99 77 66777753
No 171
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.95 E-value=9.4e-11 Score=87.97 Aligned_cols=84 Identities=23% Similarity=0.194 Sum_probs=59.9
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc--------CCCCCCCCCcccEEEEEECCeEEEEeecccccCCC
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST--------DCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRR 195 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~--------~~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~ 195 (252)
|+.|+++||++|+.+.+.|..++..|+.+.++.|+.+ .+...+++.++||+ |.+|+.+..+..+..+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g~~i~g~~~~~~~--- 88 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGKECIGGCTDLESM--- 88 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETTEEEESHHHHHHH---
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECCEEEeccHHHHHH---
Confidence 5669999999999999999998887776444444433 12356899999997 5699877643322221
Q ss_pred CCHHHHHHHHHhcCCCC
Q 025454 196 CTPEGVALVLCQSDPVL 212 (252)
Q Consensus 196 ~~~e~lE~~L~~~g~i~ 212 (252)
.....|..+|...|++.
T Consensus 89 ~~~g~L~~~l~~~g~~~ 105 (105)
T 1kte_A 89 HKRGELLTRLQQVGAVK 105 (105)
T ss_dssp HHHTHHHHHHHHHTCBC
T ss_pred HHCCcHHHHHHHcCCCC
Confidence 22467889999888763
No 172
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.95 E-value=5.1e-10 Score=80.35 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=50.0
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC-------CCCCCC--CCcccEEEEEECCeEEE
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD-------CIPNYP--DRNLPTVLVYNNGAVKA 184 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~-------~~~~~~--i~~lPTlliy~~G~~v~ 184 (252)
|+.|+++||++|+.+.+.|.+++.+++++.|..++.+. +...++ +.++||+ |.+|+.+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~ 70 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG 70 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE
Confidence 67799999999999999999999999999999998642 335677 9999998 56998764
No 173
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.93 E-value=9.9e-10 Score=93.35 Aligned_cols=86 Identities=17% Similarity=0.227 Sum_probs=65.7
Q ss_pred Cc-eEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEecc--------------------------------CCCC
Q 025454 120 DV-WVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIIST--------------------------------DCIP 164 (252)
Q Consensus 120 ~~-~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~--------------------------------~~~~ 164 (252)
++ +|||.||++||++|+.+.|.|.+++++|++ +.|+.|+.+ .+..
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 45 499999999999999999999999999975 899999873 1235
Q ss_pred CCCCCcccEEEEE-ECCeEEEEeecccc-----cCCCCCHHHHHHHHHh
Q 025454 165 NYPDRNLPTVLVY-NNGAVKANYVGLRS-----FGRRCTPEGVALVLCQ 207 (252)
Q Consensus 165 ~~~i~~lPTlliy-~~G~~v~~~vG~~~-----~G~~~~~e~lE~~L~~ 207 (252)
.|++.++|+++|+ ++|+++.+ |..+ .+...+.++|+..|.+
T Consensus 138 ~~~v~~~P~~~liD~~G~i~~~--g~~d~~~~~~~~~~~~~~l~~~i~~ 184 (218)
T 3u5r_E 138 AYGAACTPDFFLYDRERRLVYH--GQFDDARPGNGKDVTGADLRAAVDA 184 (218)
T ss_dssp HHTCCEESEEEEECTTCBEEEE--ECSSSCCTTSCCCCCCHHHHHHHHH
T ss_pred HcCCCCCCeEEEECCCCcEEEe--ccccccccccccccCHHHHHHHHHH
Confidence 7999999999999 78998754 3221 1123455666666654
No 174
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.92 E-value=1.9e-10 Score=82.49 Aligned_cols=58 Identities=16% Similarity=0.257 Sum_probs=47.4
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEecc----CCCCCCCCCcccEEEEEECCeEE
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIIST----DCIPNYPDRNLPTVLVYNNGAVK 183 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~----~~~~~~~i~~lPTlliy~~G~~v 183 (252)
++.||++||++|+.+.+.|.+++.++. .+.++.|+.+ +....|+++++|||++ +|+.+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~ 66 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAF 66 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEE
Confidence 677999999999999999999998875 3667776643 2347899999999987 99865
No 175
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.91 E-value=8.7e-10 Score=98.79 Aligned_cols=80 Identities=18% Similarity=0.203 Sum_probs=58.5
Q ss_pred hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEec----c---CCCCCCCCCcccEEEEEECC
Q 025454 108 SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIS----T---DCIPNYPDRNLPTVLVYNNG 180 (252)
Q Consensus 108 ~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~----~---~~~~~~~i~~lPTlliy~~G 180 (252)
..+.+.+.+. .+|.|||+||++|+.+.|.|+++|++++ ++.++. + ++..+|+|+++||+++ ||
T Consensus 190 ~~la~~l~~~-----~vV~F~A~WC~~Ck~l~p~le~lA~~l~---~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G 259 (291)
T 3kp9_A 190 VGLAAHLRQI-----GGTMYGAYWCPHCQDQKELFGAAFDQVP---YVECSPNGPGTPQAQECTEAGITSYPTWII--NG 259 (291)
T ss_dssp HHHHHHHHHT-----TCEEEECTTCHHHHHHHHHHGGGGGGSC---EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TT
T ss_pred HHHHHHhCCC-----CEEEEECCCCHHHHHHHHHHHHHHHHcC---EEEEeecCchhhHHHHHHHcCCcccCeEEE--CC
Confidence 4555556554 3789999999999999999999998874 455542 1 2346899999999655 99
Q ss_pred eEEEEeecccccCCCCCHHHHHHHHH
Q 025454 181 AVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 181 ~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
+. +.|.. +.++|..++.
T Consensus 260 ~~---~~G~~------~~~~L~~~l~ 276 (291)
T 3kp9_A 260 RT---YTGVR------SLEALAVASG 276 (291)
T ss_dssp EE---EESCC------CHHHHHHHTC
T ss_pred EE---ecCCC------CHHHHHHHHC
Confidence 74 66653 4677777764
No 176
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.90 E-value=2.3e-09 Score=85.49 Aligned_cols=85 Identities=12% Similarity=0.085 Sum_probs=65.7
Q ss_pred eEEEEEE-cCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC--------------------------CCCCCCCC---
Q 025454 122 WVVVILY-KDGFAECGLLMQCLEELARKYP--ATKFVKIISTD--------------------------CIPNYPDR--- 169 (252)
Q Consensus 122 ~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~--------------------------~~~~~~i~--- 169 (252)
+|||.|| ++||++|+...|.|.+++.+|. ++.|+.|..+. +...|++.
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~ 117 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQ 117 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETT
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcccc
Confidence 8999998 9999999999999999999995 48888886531 22568888
Q ss_pred -ccc---EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 170 -NLP---TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 170 -~lP---Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
++| ++++-++|+++..+.|.. ...-..+.+...|.+.
T Consensus 118 ~~~p~~~~~lid~~G~i~~~~~g~~--~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 118 AGIANRGTFVVDRSGIIRFAEMKQP--GEVRDQRLWTDALAAL 158 (160)
T ss_dssp TTEECSEEEEECTTSBEEEEEECCT--TCCCCHHHHHHHHHHT
T ss_pred CCCeeeeEEEECCCCeEEEEEecCC--CCCCCHHHHHHHHHHh
Confidence 999 666668999999998863 2233456666666543
No 177
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.89 E-value=1.8e-09 Score=88.94 Aligned_cols=73 Identities=10% Similarity=0.180 Sum_probs=61.5
Q ss_pred CCceEEEEEE-cCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC----------------------------CCCCCC
Q 025454 119 PDVWVVVILY-KDGFAECGLLMQCLEELARKYP--ATKFVKIISTD----------------------------CIPNYP 167 (252)
Q Consensus 119 ~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~----------------------------~~~~~~ 167 (252)
+|++|||+|| ++||++|+...|.|.+++.+|. ++.|+.|..+. +...|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 3579999999 9999999999999999999886 58888886542 124688
Q ss_pred CC------cccEEEEE-ECCeEEEEeecccc
Q 025454 168 DR------NLPTVLVY-NNGAVKANYVGLRS 191 (252)
Q Consensus 168 i~------~lPTlliy-~~G~~v~~~vG~~~ 191 (252)
+. .+|+++++ ++|+++..+.|...
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~ 140 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADG 140 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTT
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCC
Confidence 88 89999999 79999999988643
No 178
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.89 E-value=1.3e-09 Score=82.06 Aligned_cols=74 Identities=14% Similarity=0.135 Sum_probs=58.9
Q ss_pred ceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc--C---CCCCCCCCcccEEEEEECCeEEEEeecccccCCC
Q 025454 121 VWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST--D---CIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRR 195 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~--~---~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~ 195 (252)
.++|+.|+++||++|+.+.+.|.+++.. +.|.++|.+ . +...|+ .++|+| |.+|+.+ .+.|
T Consensus 16 ~~~v~~f~~~~C~~C~~~~~~L~~l~~~---i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~-~~~g------- 81 (100)
T 1wjk_A 16 LPVLTLFTKAPCPLCDEAKEVLQPYKDR---FILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL-MMHR------- 81 (100)
T ss_dssp CCEEEEEECSSCHHHHHHHHHTSTTSSS---SEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE-EESS-------
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHhhhC---CeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE-EecC-------
Confidence 4688999999999999999999987643 899999987 3 236799 999986 5789875 2333
Q ss_pred CCHHHHHHHHHhc
Q 025454 196 CTPEGVALVLCQS 208 (252)
Q Consensus 196 ~~~e~lE~~L~~~ 208 (252)
++.+.|+.+|.+.
T Consensus 82 ~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 82 VNTSKLEKQLRKL 94 (100)
T ss_dssp CCHHHHHHHHHSS
T ss_pred CCHHHHHHHHHHH
Confidence 5678999999764
No 179
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.89 E-value=5.7e-09 Score=86.36 Aligned_cols=83 Identities=7% Similarity=-0.008 Sum_probs=63.2
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC--------------CC-------------------
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD--------------CI------------------- 163 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~--------------~~------------------- 163 (252)
+|++|||.||++||++|+...|.|.++.++|.+ +.|+.|..+. ..
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 357999999999999999999999999999875 8899886431 00
Q ss_pred -----------CCCCCCccc-------EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 164 -----------PNYPDRNLP-------TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 164 -----------~~~~i~~lP-------Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
..|++.++| +++|.++|+++.++.|.. +.+.|...|.+
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~------~~~~l~~~i~~ 182 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGA------SVKDIEKKLIP 182 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTC------CHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCC------CHHHHHHHHHH
Confidence 014778898 666668999999988753 45566555544
No 180
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.88 E-value=2.3e-09 Score=89.15 Aligned_cols=87 Identities=16% Similarity=0.189 Sum_probs=69.0
Q ss_pred CCceEEEEEE-cCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC----------------------------CCCCCC
Q 025454 119 PDVWVVVILY-KDGFAECGLLMQCLEELARKYP--ATKFVKIISTD----------------------------CIPNYP 167 (252)
Q Consensus 119 ~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~----------------------------~~~~~~ 167 (252)
++++|||.|| ++||++|+...|.|.++.++|+ ++.|+.|..+. +...|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 3479999999 9999999999999999999986 58888886542 114588
Q ss_pred CC-----cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 168 DR-----NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 168 i~-----~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+. .+|+++++ ++|+++..+.|....+ .+.++|...|.+
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~--~~~~~l~~~l~~ 167 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSVG--RNVDEVLRVLDA 167 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTCC--CCHHHHHHHHHH
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCCC--CCHHHHHHHHHH
Confidence 88 99999998 5899999998864332 256777777665
No 181
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.88 E-value=2.6e-09 Score=86.60 Aligned_cols=70 Identities=17% Similarity=0.169 Sum_probs=55.6
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEecc-----------C---CC-------------------
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIIST-----------D---CI------------------- 163 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~-----------~---~~------------------- 163 (252)
+|++|||.||++||++|+ ..|.|.++.++|.+ +.|+.|+.+ . ..
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 357999999999999999 99999999999864 888888541 0 01
Q ss_pred -----------CCCCCCccc-------EEEEEECCeEEEEeecc
Q 025454 164 -----------PNYPDRNLP-------TVLVYNNGAVKANYVGL 189 (252)
Q Consensus 164 -----------~~~~i~~lP-------Tlliy~~G~~v~~~vG~ 189 (252)
..|++.++| |++|-++|+++.++.|.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~ 153 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSL 153 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTT
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCC
Confidence 136788999 56666899999998874
No 182
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.86 E-value=4.6e-09 Score=86.20 Aligned_cols=41 Identities=10% Similarity=0.115 Sum_probs=36.6
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEec
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIIS 159 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~ 159 (252)
+|++|||.||++||++|+...|.|.++.++|.+ +.|+.|..
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 88 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPC 88 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEEC
Confidence 357999999999999999999999999999975 88888864
No 183
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.85 E-value=7.4e-09 Score=82.83 Aligned_cols=41 Identities=5% Similarity=0.016 Sum_probs=36.7
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEec
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIIS 159 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~ 159 (252)
+|++|||.||++||++|+...|.|.++.++|.+ +.|+.|..
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~ 72 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPC 72 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 357999999999999999999999999999874 88888864
No 184
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.83 E-value=6.1e-09 Score=83.40 Aligned_cols=41 Identities=7% Similarity=0.063 Sum_probs=36.8
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEec
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIIS 159 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~ 159 (252)
+|++|||.||++||++|+...|.|.+++.+|.+ +.|+.|..
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~ 73 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPC 73 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEEC
Confidence 357999999999999999999999999999875 88998864
No 185
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.83 E-value=1.1e-08 Score=84.53 Aligned_cols=84 Identities=8% Similarity=0.038 Sum_probs=62.5
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC--------------CCC-C----------------
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD--------------CIP-N---------------- 165 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~--------------~~~-~---------------- 165 (252)
+|++|||.||++||++|+...|.|.++.++|.+ +.|+.|..+. ... +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 457999999999999999999999999999975 8888886431 011 1
Q ss_pred ----------------CCCCccc---EEE-EEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 166 ----------------YPDRNLP---TVL-VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 166 ----------------~~i~~lP---Tll-iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
|++..+| |++ |-++|+++..+.|. .+.+.|+..|.+.
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~------~~~~~l~~~i~~l 181 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPG------ASVKDIEEKLIPL 181 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTT------CCHHHHHHHHHHH
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCC------CCHHHHHHHHHHH
Confidence 1334667 554 45899999998875 4567777777653
No 186
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.82 E-value=2.6e-09 Score=85.93 Aligned_cols=70 Identities=14% Similarity=0.174 Sum_probs=58.6
Q ss_pred Cce-EEEEEE-cCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC------------------------CCCCCCCCc-
Q 025454 120 DVW-VVVILY-KDGFAECGLLMQCLEELARKYPA--TKFVKIISTD------------------------CIPNYPDRN- 170 (252)
Q Consensus 120 ~~~-VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~------------------------~~~~~~i~~- 170 (252)
|++ |||.|| ++||++|+...|.|.+++.+|.. +.|+.|..+. +...|++.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 107 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGF 107 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCS
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCc
Confidence 355 999999 99999999999999999999864 8888886541 235799999
Q ss_pred ---ccEEEEE-ECCeEEEEeecc
Q 025454 171 ---LPTVLVY-NNGAVKANYVGL 189 (252)
Q Consensus 171 ---lPTlliy-~~G~~v~~~vG~ 189 (252)
+|+++++ ++|+++..+.|.
T Consensus 108 ~~~~P~~~lid~~G~i~~~~~g~ 130 (161)
T 3drn_A 108 ILPARITFVIDKKGIIRHIYNSQ 130 (161)
T ss_dssp SSCCCEEEEECTTSBEEEEEECS
T ss_pred CcccceEEEECCCCEEEEEEecC
Confidence 9988877 689999999883
No 187
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.82 E-value=2.9e-09 Score=88.64 Aligned_cols=87 Identities=10% Similarity=0.149 Sum_probs=66.9
Q ss_pred CCceEEEEEE-cCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC-------------------------------CCC
Q 025454 119 PDVWVVVILY-KDGFAECGLLMQCLEELARKYP--ATKFVKIISTD-------------------------------CIP 164 (252)
Q Consensus 119 ~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~-------------------------------~~~ 164 (252)
+|++|||+|| ++||++|+...|.|.++..+|. ++.|+.|..+. +..
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 3579999999 9999999999999999999885 48888886542 124
Q ss_pred CCCCC-----cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 165 NYPDR-----NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 165 ~~~i~-----~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
.|++. .+|+++++ ++|+++..+.|....+ .+.++|...|.+
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~--~~~~~l~~~l~~ 158 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLG--RNADEMLRMVDA 158 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCC--CHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCC--CCHHHHHHHHHH
Confidence 68888 99988888 6899999998854322 245666665543
No 188
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.80 E-value=1.8e-08 Score=82.50 Aligned_cols=41 Identities=10% Similarity=0.027 Sum_probs=36.7
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEec
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIIS 159 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~ 159 (252)
+|++|||.||++||++|+...|.|.+++++|.+ +.++.|..
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~ 79 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPC 79 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEEC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEEC
Confidence 457999999999999999999999999999975 78888863
No 189
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.79 E-value=1.1e-08 Score=83.93 Aligned_cols=83 Identities=13% Similarity=0.098 Sum_probs=63.8
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC-----------C---CC------------------
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIISTD-----------C---IP------------------ 164 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~-----------~---~~------------------ 164 (252)
+|++|||.||++||++|+...|.|.+++++|.+ +.|+.|..+. + ..
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 357999999999999999999999999999975 8888886421 0 00
Q ss_pred ------CCCCCccc--------EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 165 ------NYPDRNLP--------TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 165 ------~~~i~~lP--------Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
.|.+..+| |++|.++|+++.++.|. .+.++|+..|.+
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~------~~~~~l~~~i~~ 178 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPT------VSVEEVRPQITA 178 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTT------SCHHHHHHHHHT
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCC------CCHHHHHHHHHH
Confidence 12245678 77777999999998874 356778777765
No 190
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.78 E-value=1e-08 Score=85.34 Aligned_cols=85 Identities=11% Similarity=0.131 Sum_probs=65.3
Q ss_pred CceEEEEEE-cCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC-------------------------------CCCC
Q 025454 120 DVWVVVILY-KDGFAECGLLMQCLEELARKYP--ATKFVKIISTD-------------------------------CIPN 165 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~-------------------------------~~~~ 165 (252)
|++|||.|| ++||++|....+.|.+++++|. ++.|+.|..+. +...
T Consensus 34 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 113 (197)
T 1qmv_A 34 GKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSED 113 (197)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHH
Confidence 479999999 9999999999999999999884 58999886541 1245
Q ss_pred CCCC------cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 166 YPDR------NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 166 ~~i~------~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
|++. .+|+++++ ++|+++..++|....+ .+.+++...|.
T Consensus 114 ~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~--~~~~e~l~~l~ 159 (197)
T 1qmv_A 114 YGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVG--RSVDEALRLVQ 159 (197)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTBC--CCHHHHHHHHH
T ss_pred cCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCC--CCHHHHHHHHH
Confidence 7777 79977777 7899999998864433 24555555554
No 191
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.78 E-value=8.8e-09 Score=85.23 Aligned_cols=85 Identities=13% Similarity=0.199 Sum_probs=65.5
Q ss_pred CceEEEEEE-cCCCchhhhHHHHHHHHHHHC--CCceEEEEeccC-------------------------------CCCC
Q 025454 120 DVWVVVILY-KDGFAECGLLMQCLEELARKY--PATKFVKIISTD-------------------------------CIPN 165 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky--~~vkFvkI~~~~-------------------------------~~~~ 165 (252)
|++|||+|| ++||++|....|.|.+++.+| .++.|+.|..+. +...
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 110 (192)
T 2h01_A 31 KKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARS 110 (192)
T ss_dssp TCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHH
Confidence 469999999 999999999999999999998 568888886531 1146
Q ss_pred CCCC-----cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 166 YPDR-----NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 166 ~~i~-----~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
|++. .+|+++|+ ++|+++...+|....+ .+.+++...|.
T Consensus 111 ~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~--~~~~~l~~~l~ 155 (192)
T 2h01_A 111 YDVLFNESVALRAFVLIDKQGVVQHLLVNNLALG--RSVDEILRLID 155 (192)
T ss_dssp TTCEETTTEECCEEEEECTTSBEEEEEEGGGSSG--GGHHHHHHHHH
T ss_pred hCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCC--CCHHHHHHHHH
Confidence 8888 89999999 7899999988854322 23455544443
No 192
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.76 E-value=1.2e-08 Score=85.36 Aligned_cols=85 Identities=9% Similarity=0.154 Sum_probs=65.4
Q ss_pred CceEEEEEE-cCCCchhhhHHHHHHHHHHHC--CCceEEEEeccC-------------------------------CCCC
Q 025454 120 DVWVVVILY-KDGFAECGLLMQCLEELARKY--PATKFVKIISTD-------------------------------CIPN 165 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky--~~vkFvkI~~~~-------------------------------~~~~ 165 (252)
|++|||.|| ++||++|....|.|.+++.+| .++.|+.|..+. +...
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 469999999 999999999999999999998 468999886542 1135
Q ss_pred CCCC------cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 166 YPDR------NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 166 ~~i~------~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
|++. .+|+++++ ++|+++..++|....+ .+.++|...|.
T Consensus 116 ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~--~~~~ell~~l~ 161 (202)
T 1uul_A 116 YGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVG--RDVDEALRLVK 161 (202)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEEEEEEECTTBC--CCHHHHHHHHH
T ss_pred cCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCC--CCHHHHHHHHH
Confidence 7888 99988887 7899999988865433 23455554443
No 193
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.73 E-value=2.2e-08 Score=85.29 Aligned_cols=86 Identities=16% Similarity=0.203 Sum_probs=67.7
Q ss_pred CceEEEEEE-cCCCchhhhHHHHHHHHHHHC--CCceEEEEeccC-------------------------------CCCC
Q 025454 120 DVWVVVILY-KDGFAECGLLMQCLEELARKY--PATKFVKIISTD-------------------------------CIPN 165 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky--~~vkFvkI~~~~-------------------------------~~~~ 165 (252)
+++|||.|| ++||++|+...+.|.+++.+| .++.|+.|..+. +...
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 479999999 999999999999999999998 568898886531 1246
Q ss_pred CCCC------cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 166 YPDR------NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 166 ~~i~------~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|++. .+|+++|+ ++|+++..++|....| .+.+++...|..
T Consensus 136 ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~--~~~~ell~~l~~ 182 (220)
T 1zye_A 136 YGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVG--RSVEETLRLVKA 182 (220)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTCC--CCHHHHHHHHHH
T ss_pred hCCeecCCCcccceEEEECCCCEEEEEEecCCCCC--CCHHHHHHHHHH
Confidence 8888 99999999 7899999988864322 345666666554
No 194
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.72 E-value=1.4e-08 Score=82.63 Aligned_cols=89 Identities=13% Similarity=0.166 Sum_probs=61.5
Q ss_pred CceEEEEEEcCCCchhhhHHHHH---HHHHHHC-CCceEEEEeccC-----CCCCCCCCcccEEEEEEC--CeEEEEeec
Q 025454 120 DVWVVVILYKDGFAECGLLMQCL---EELARKY-PATKFVKIISTD-----CIPNYPDRNLPTVLVYNN--GAVKANYVG 188 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l---~~LA~ky-~~vkFvkI~~~~-----~~~~~~i~~lPTlliy~~--G~~v~~~vG 188 (252)
+++|+|.||++||..|+.|.... ..+++.. .+..+++++.+. +...|++.++||++|+.. |+.+..+.|
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g 121 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ 121 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC
Confidence 47999999999999999996443 2233222 246778888753 347899999999999963 777766533
Q ss_pred ccccCCCCCHHH----HHHHHHhcCCCCCCC
Q 025454 189 LRSFGRRCTPEG----VALVLCQSDPVLNDG 215 (252)
Q Consensus 189 ~~~~G~~~~~e~----lE~~L~~~g~i~~~~ 215 (252)
++.++ |..++.+++......
T Consensus 122 -------~~~~~fl~~L~~~l~~~~~~~~~~ 145 (153)
T 2dlx_A 122 -------LDVSSFLDQVTGFLGEHGQLDGLS 145 (153)
T ss_dssp -------CCHHHHHHHHHHHHHHTCSCSSCC
T ss_pred -------CCHHHHHHHHHHHHHhcCCCCCCC
Confidence 34444 555666677665443
No 195
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.71 E-value=6.4e-10 Score=85.40 Aligned_cols=83 Identities=13% Similarity=0.131 Sum_probs=58.6
Q ss_pred EEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC----------CCCCCCCCcccEEEEEECCeEEEEeeccccc
Q 025454 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD----------CIPNYPDRNLPTVLVYNNGAVKANYVGLRSF 192 (252)
Q Consensus 123 VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~----------~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~ 192 (252)
.|+.|+++||++|+.+.+.|.++...++. |..++.+. +...+++.++|+++ .+|+.++.+.++..+
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~--i~g~~igg~~~~~~~ 95 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKRGA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIF--FGKTSIGGYSDLLEI 95 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCTTS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEE--ETTEEEESHHHHHHH
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCcCc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEE--ECCEEEeCcHHHHHH
Confidence 46779999999999999999886644433 66776643 23568999999974 489887644333221
Q ss_pred CCCCCHHHHHHHHHhcCCCC
Q 025454 193 GRRCTPEGVALVLCQSDPVL 212 (252)
Q Consensus 193 G~~~~~e~lE~~L~~~g~i~ 212 (252)
.+...|+.+|...|++.
T Consensus 96 ---~~~~~L~~~L~~~g~~~ 112 (114)
T 2hze_A 96 ---DNMDALGDILSSIGVLR 112 (114)
T ss_dssp ---HHTTCHHHHHHHTTCBC
T ss_pred ---HHCChHHHHHHHcCCee
Confidence 12346889999888864
No 196
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.67 E-value=4e-08 Score=83.39 Aligned_cols=85 Identities=14% Similarity=0.202 Sum_probs=64.1
Q ss_pred CceEEEEEE-cCCCchhhhHHHHHHHHHHHC--CCceEEEEeccC-------------------------------CCCC
Q 025454 120 DVWVVVILY-KDGFAECGLLMQCLEELARKY--PATKFVKIISTD-------------------------------CIPN 165 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky--~~vkFvkI~~~~-------------------------------~~~~ 165 (252)
+++|||.|| ++||++|+...|.|.+++++| .++.|+-|..+. +...
T Consensus 52 gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 131 (213)
T 2i81_A 52 KKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKD 131 (213)
T ss_dssp TCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHH
Confidence 469999999 999999999999999999998 568888886431 1145
Q ss_pred CCCC-----cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 166 YPDR-----NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 166 ~~i~-----~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
|++. .+|+++|+ ++|+++..++|....| .+.++|...|.
T Consensus 132 ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~--~~~~ell~~l~ 176 (213)
T 2i81_A 132 YNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIG--RSVDEILRIID 176 (213)
T ss_dssp TTCEETTTEECEEEEEECTTSBEEEEEEECTTCC--CCHHHHHHHHH
T ss_pred hCCccccCCcccEEEEECCCCEEEEEEecCCCCC--CCHHHHHHHHH
Confidence 7887 89977666 6899999988754333 24455554443
No 197
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.67 E-value=2.7e-08 Score=84.22 Aligned_cols=41 Identities=7% Similarity=-0.106 Sum_probs=36.4
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEec
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIIS 159 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~ 159 (252)
+|++|||+||++||++|+...|.|.+|+++|.. +.++.|+.
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~ 88 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPC 88 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEEC
Confidence 357999999999999999999999999999864 88888865
No 198
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.67 E-value=3.6e-08 Score=81.14 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=36.3
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEec
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKIIS 159 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~ 159 (252)
+|++|||.||++||++|+...|.|.++.++|.+ +.|+.|..
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~ 90 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPC 90 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 347999999999999999999999999999874 88888864
No 199
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.66 E-value=6e-08 Score=77.95 Aligned_cols=84 Identities=11% Similarity=0.112 Sum_probs=62.7
Q ss_pred CceEEEEEEcCCCc-hhhhHHHHHHHHHHHCC----CceEEEEeccC---C-------CC--------------------
Q 025454 120 DVWVVVILYKDGFA-ECGLLMQCLEELARKYP----ATKFVKIISTD---C-------IP-------------------- 164 (252)
Q Consensus 120 ~~~VVV~fya~wc~-~Ck~l~~~l~~LA~ky~----~vkFvkI~~~~---~-------~~-------------------- 164 (252)
|++|||+||++||+ +|....+.|.++.++|. ++.|+.|..+. . ..
T Consensus 33 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~ 112 (174)
T 1xzo_A 33 GEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEI 112 (174)
T ss_dssp TCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHHH
T ss_pred CCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHHH
Confidence 57899999999999 99999999999998875 38898886531 0 00
Q ss_pred -----------------CCCCCcccE-EEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 165 -----------------NYPDRNLPT-VLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 165 -----------------~~~i~~lPT-lliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
.|.+..+|+ ++|-++|+++..+.|... .+.++|...|.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~----~~~~~l~~~l~~ 169 (174)
T 1xzo_A 113 EEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVEN----TPYDDIISDVKS 169 (174)
T ss_dssp HHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSS----CCHHHHHHHHHH
T ss_pred HHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCC----CCHHHHHHHHHH
Confidence 134567896 555578999999988642 346777777765
No 200
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.66 E-value=7.9e-08 Score=78.06 Aligned_cols=40 Identities=18% Similarity=0.168 Sum_probs=35.7
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEe
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKII 158 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~ 158 (252)
.++++|+.|+.+|||+|+.+.|.|.++.++++.++|+...
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~ 60 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYRE 60 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 3468899999999999999999999999999998877665
No 201
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.65 E-value=6.9e-08 Score=81.99 Aligned_cols=77 Identities=16% Similarity=0.198 Sum_probs=56.2
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc-------------------------------------C
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST-------------------------------------D 161 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~-------------------------------------~ 161 (252)
.++++|+.||++|||+|+.+.|.|.+++.. +++|+.+... .
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~~ 162 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPAS 162 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChhH
Confidence 457899999999999999999999999864 5555543210 1
Q ss_pred C----------CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 162 C----------IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 162 ~----------~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
| ...|+|.++||+ ++.||. .+.|. .+.+.|+.+|.+
T Consensus 163 ~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~---~~~G~------~~~~~l~~~l~~ 208 (216)
T 1eej_A 163 CDVDIADHYALGVQLGVSGTPAV-VLSNGT---LVPGY------QPPKEMKEFLDE 208 (216)
T ss_dssp CSCCHHHHHHHHHHHTCCSSSEE-ECTTSC---EEESC------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCccCEE-EEcCCe---EecCC------CCHHHHHHHHHH
Confidence 1 257899999999 567885 34554 346788887765
No 202
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.61 E-value=8.2e-08 Score=81.78 Aligned_cols=86 Identities=12% Similarity=0.198 Sum_probs=65.0
Q ss_pred CCceEEEEEEc-CCCchhhhHHHHHHHHHHHCC--CceEEEEeccC-------------------------------CCC
Q 025454 119 PDVWVVVILYK-DGFAECGLLMQCLEELARKYP--ATKFVKIISTD-------------------------------CIP 164 (252)
Q Consensus 119 ~~~~VVV~fya-~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~-------------------------------~~~ 164 (252)
+|++|||.||+ .||++|....|.|.++.++|. ++.|+-|..+. +..
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 35799999996 999999999999999999984 48888886541 014
Q ss_pred CCCCC------cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 165 NYPDR------NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 165 ~~~i~------~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
.|++. .+|+++|+ ++|+++..+.|....+ ...+++...|.
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~--~~~~~il~~l~ 194 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVG--RSVDETLRLLD 194 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBC--CCHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCC--CCHHHHHHHHH
Confidence 58887 89988888 6899999998865432 22455544444
No 203
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.59 E-value=1.1e-07 Score=76.41 Aligned_cols=70 Identities=14% Similarity=0.028 Sum_probs=55.7
Q ss_pred CceEEEEEEcCC-CchhhhHHHHHHHHHHHCCCceEEEEeccC------------C--------------CCCCCCCc--
Q 025454 120 DVWVVVILYKDG-FAECGLLMQCLEELARKYPATKFVKIISTD------------C--------------IPNYPDRN-- 170 (252)
Q Consensus 120 ~~~VVV~fya~w-c~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~------------~--------------~~~~~i~~-- 170 (252)
|++|||.||+.| |++|+...|.|.+++++|+++.|+.|..+. . ...|++..
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~ 123 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKE 123 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBTT
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCcccc
Confidence 468999999999 999999999999999999779999886542 0 12466655
Q ss_pred ----ccEEEEE-ECCeEEEEeecc
Q 025454 171 ----LPTVLVY-NNGAVKANYVGL 189 (252)
Q Consensus 171 ----lPTlliy-~~G~~v~~~vG~ 189 (252)
.|+++++ ++|+++..++|.
T Consensus 124 ~g~~~p~~~lid~~G~i~~~~~g~ 147 (167)
T 2jsy_A 124 LRLLARSVFVLDENGKVVYAEYVS 147 (167)
T ss_dssp TCSBCCEEEEECTTSCEEEEEECS
T ss_pred CCceeeEEEEEcCCCcEEEEEecC
Confidence 3866666 689999998874
No 204
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.59 E-value=1.1e-07 Score=77.66 Aligned_cols=68 Identities=12% Similarity=0.108 Sum_probs=54.5
Q ss_pred CceEEEEEEcCC-CchhhhHHHHHHHHHHHCCCceEEEEeccC-------------------------CCCCCCCCcc--
Q 025454 120 DVWVVVILYKDG-FAECGLLMQCLEELARKYPATKFVKIISTD-------------------------CIPNYPDRNL-- 171 (252)
Q Consensus 120 ~~~VVV~fya~w-c~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~-------------------------~~~~~~i~~l-- 171 (252)
+++|||.||+.| |++|+...|.|.++.++ .++.|+.|..+. +...|++...
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~ 122 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA-SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIADG 122 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH-TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCSS
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh-cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCccccc
Confidence 468999999999 99999999999999998 889999886541 1145777766
Q ss_pred -------cEEEE-EECCeEEEEeec
Q 025454 172 -------PTVLV-YNNGAVKANYVG 188 (252)
Q Consensus 172 -------PTlli-y~~G~~v~~~vG 188 (252)
|++++ -++|+++..++|
T Consensus 123 ~~~g~~~p~~~lid~~G~I~~~~~g 147 (175)
T 1xvq_A 123 PMAGLLARAIVVIGADGNVAYTELV 147 (175)
T ss_dssp TTTTSBCSEEEEECTTSBEEEEEEC
T ss_pred ccCCcccceEEEECCCCeEEEEEEC
Confidence 65555 468999999875
No 205
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.56 E-value=5.8e-08 Score=68.96 Aligned_cols=69 Identities=16% Similarity=0.198 Sum_probs=50.3
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC---C---CCCCCCcccEEEEEECCeEEEEeecccccCCCCC
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC---I---PNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCT 197 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~---~---~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~ 197 (252)
|+.|+++||++|+.+.+.|.++ ++.|..++.+.. . ..+++.++||+ |.+|+.+ .| ++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-----~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~~---~g-------~~ 65 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-----GFDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLSW---SG-------FR 65 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEEE---ES-------CC
T ss_pred EEEEcCCCChhHHHHHHHHHHC-----CCCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEEE---ec-------CC
Confidence 5679999999999999999874 477788877642 1 24899999998 4588643 33 34
Q ss_pred HHHHHHHHHhcC
Q 025454 198 PEGVALVLCQSD 209 (252)
Q Consensus 198 ~e~lE~~L~~~g 209 (252)
.+.|+.+|.+++
T Consensus 66 ~~~l~~~l~~~~ 77 (81)
T 1h75_A 66 PDMINRLHPAPH 77 (81)
T ss_dssp HHHHGGGSCCC-
T ss_pred HHHHHHHHhccc
Confidence 677777776544
No 206
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=4.4e-08 Score=76.98 Aligned_cols=94 Identities=11% Similarity=0.148 Sum_probs=61.3
Q ss_pred hhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC----------CCCCCCCCcccEEEE
Q 025454 107 GSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD----------CIPNYPDRNLPTVLV 176 (252)
Q Consensus 107 ~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~----------~~~~~~i~~lPTlli 176 (252)
.+.+...+... .|+| |+++||++|+.+.+.|..+. +.|..++.+. +...+++.++|+|+
T Consensus 17 ~~~~~~~i~~~----~vvv-f~~~~Cp~C~~~~~~L~~~~-----i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~- 85 (130)
T 2cq9_A 17 VNQIQETISDN----CVVI-FSKTSCSYCTMAKKLFHDMN-----VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF- 85 (130)
T ss_dssp HHHHHHHHHHS----SEEE-EECSSCSHHHHHHHHHHHHT-----CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE-
T ss_pred HHHHHHHHcCC----cEEE-EEcCCChHHHHHHHHHHHcC-----CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE-
Confidence 34455555443 3554 99999999999999999874 4455555542 23568999999984
Q ss_pred EECCeEEEEeecccccCCCCCHHHHHHHHHhcCCCCCCC
Q 025454 177 YNNGAVKANYVGLRSFGRRCTPEGVALVLCQSDPVLNDG 215 (252)
Q Consensus 177 y~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g~i~~~~ 215 (252)
.+|+.+..+..+..+ .....|..+|...|+.....
T Consensus 86 -i~G~~igg~~~l~~~---~~~~~L~~~L~~~g~~~~~~ 120 (130)
T 2cq9_A 86 -VNGTFIGGATDTHRL---HKEGKLLPLVHQCYLKKSKR 120 (130)
T ss_dssp -ETTEEEEEHHHHHHH---HHHTSSHHHHHHHSSSCSSC
T ss_pred -ECCEEEcChHHHHHH---HHcCcHHHHHHHcCcHHHhH
Confidence 599877653222211 12345788888888665443
No 207
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.53 E-value=8.1e-08 Score=80.26 Aligned_cols=88 Identities=8% Similarity=0.020 Sum_probs=58.9
Q ss_pred CCceEEEEEEcCCCch-hhhHHHHHHHHHHHCC-----CceEEEEeccC-------------------------------
Q 025454 119 PDVWVVVILYKDGFAE-CGLLMQCLEELARKYP-----ATKFVKIISTD------------------------------- 161 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~-Ck~l~~~l~~LA~ky~-----~vkFvkI~~~~------------------------------- 161 (252)
+|++|||.||++||++ |....|.|.++..++. ++.|+.|..+.
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 3579999999999997 9999999999766553 68888886541
Q ss_pred CCCCCCCC-ccc----------------EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 162 CIPNYPDR-NLP----------------TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 162 ~~~~~~i~-~lP----------------Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+...|++. ..| +++|-++|+++..+.|... ..-..+.|..+|...
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~--~~~~~~~i~~~l~~l 181 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYD--EKTGVDKIVEHVKSY 181 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCC--TTHHHHHHHHHHHHC
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCC--HHHHHHHHHHHHHHh
Confidence 11346665 344 3777789999998876422 112235566666653
No 208
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.49 E-value=6.5e-08 Score=77.93 Aligned_cols=91 Identities=11% Similarity=0.166 Sum_probs=57.8
Q ss_pred hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC----------CCCCCCCCcccEEEEE
Q 025454 108 SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD----------CIPNYPDRNLPTVLVY 177 (252)
Q Consensus 108 ~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~----------~~~~~~i~~lPTlliy 177 (252)
..+...+... .|+| |+++||++|+.+.+.|..+. +.|..++.+. +...+++.++|+|+
T Consensus 40 ~~~~~~i~~~----~Vvv-f~~~~Cp~C~~~k~~L~~~~-----i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if-- 107 (146)
T 2ht9_A 40 NQIQETISDN----CVVI-FSKTSCSYCTMAKKLFHDMN-----VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF-- 107 (146)
T ss_dssp HHHHHHHHHC----SEEE-EECTTCHHHHHHHHHHHHHT-----CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--
T ss_pred HHHHHHhcCC----CEEE-EECCCChhHHHHHHHHHHcC-----CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--
Confidence 4555555443 3555 99999999999999999875 3455555432 23568999999984
Q ss_pred ECCeEEEEeecccccCCCCCHHHHHHHHHhcCCCCC
Q 025454 178 NNGAVKANYVGLRSFGRRCTPEGVALVLCQSDPVLN 213 (252)
Q Consensus 178 ~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g~i~~ 213 (252)
.+|+.+..+..+..+ .....|..+|...|+...
T Consensus 108 i~G~~igG~d~l~~l---~~~g~L~~~L~~~g~~~~ 140 (146)
T 2ht9_A 108 VNGTFIGGATDTHRL---HKEGKLLPLVHQCYLKKS 140 (146)
T ss_dssp ETTEEEESHHHHHHH---HHTTCHHHHHHHTTC---
T ss_pred ECCEEEeCchHHHHH---HHcChHHHHHHHcCcchh
Confidence 599876543222111 112358888888876543
No 209
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.46 E-value=1.1e-07 Score=80.57 Aligned_cols=78 Identities=18% Similarity=0.218 Sum_probs=57.9
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc--------------------------------------
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST-------------------------------------- 160 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~-------------------------------------- 160 (252)
.++.+|+.|+++|||+|+.+.|.|.++... +++|..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~~ 162 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEVK 162 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChHH
Confidence 346899999999999999999999998763 4555433110
Q ss_pred ---------CCCCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 161 ---------DCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 161 ---------~~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
.+...++|+++|||++ .||+ .+.|. .+.+.|+.+|.+.
T Consensus 163 ~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~---~~~G~------~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 163 TPNIVKKHYELGIQFGVRGTPSIVT-STGE---LIGGY------LKPADLLRALEET 209 (211)
T ss_dssp CSSHHHHHHHHHHHHTCCSSCEEEC-TTSC---CCCSC------CCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCcCCEEEE-eCCE---EecCC------CCHHHHHHHHHhc
Confidence 0125789999999998 7886 34453 3578899988764
No 210
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.44 E-value=3.3e-06 Score=71.76 Aligned_cols=107 Identities=12% Similarity=0.112 Sum_probs=81.9
Q ss_pred hhcCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC-----CCCCCCC
Q 025454 95 KISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIISTD-----CIPNYPD 168 (252)
Q Consensus 95 ~~~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~-----~~~~~~i 168 (252)
....++.|.+++.+++.......- ..+++.|+.+||+.|..+.+.|..+|++|.+ +.|+.++++. ....|++
T Consensus 108 ~~~~~plv~e~t~~n~~~~~~~~~--~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl 185 (227)
T 4f9z_D 108 EINSLHMVTEYNPVTVIGLFNSVI--QIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKL 185 (227)
T ss_dssp HHHCCCSEEECCHHHHHHHHHSSC--CEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTC
T ss_pred HHhCCCceeecCcccHHHHhccCC--ceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCC
Confidence 334577899999999888776432 3566677889999999999999999999986 9999999863 3477888
Q ss_pred C--cccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 169 R--NLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 169 ~--~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
. .+|+|+++..+....-.. . ...++.+.|..|+..
T Consensus 186 ~~~~~P~~~i~~~~~~~ky~~--~--~~~~t~~~i~~Fv~~ 222 (227)
T 4f9z_D 186 KESQLPALAIYQTLDDEWDTL--P--TAEVSVEHVQNFCDG 222 (227)
T ss_dssp CGGGCSEEEEEESSSCCEEEE--T--TCCCCHHHHHHHHHH
T ss_pred CcccCCEEEEEECCCCccccC--C--cCCCCHHHHHHHHHH
Confidence 8 899999998543221111 1 135889999999875
No 211
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.42 E-value=5e-07 Score=62.74 Aligned_cols=65 Identities=15% Similarity=0.243 Sum_probs=49.0
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC---CC---CCCCCcccEEEEEECCeEEEEeecccccCCCCC
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC---IP---NYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCT 197 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~---~~---~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~ 197 (252)
|+.|+++||++|+.+.+.|.++ ++.|..++.+.. .. .+++.++||+++ +|+. +.|+ +
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~---~~g~-------~ 65 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH---WSGF-------R 65 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE---EESC-------C
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE---EcCC-------C
Confidence 5678999999999999999875 467777776542 22 789999999984 8864 3443 4
Q ss_pred HHHHHHHH
Q 025454 198 PEGVALVL 205 (252)
Q Consensus 198 ~e~lE~~L 205 (252)
.+.|+.+|
T Consensus 66 ~~~l~~~l 73 (75)
T 1r7h_A 66 PERIKQLQ 73 (75)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 67777776
No 212
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.40 E-value=4.2e-07 Score=74.97 Aligned_cols=40 Identities=28% Similarity=0.414 Sum_probs=35.2
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEe
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKII 158 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~ 158 (252)
.++++||.|+.+|||+|+.+.|.|.+|.++|+. +.|..+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p 64 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLP 64 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEe
Confidence 346899999999999999999999999999986 7777654
No 213
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.39 E-value=1.4e-07 Score=73.02 Aligned_cols=80 Identities=18% Similarity=0.191 Sum_probs=53.8
Q ss_pred EEEEEcCCCchhhhH-HHHHHHHHHHCCCceEEEEeccCC----------CCCCCCCcccEEEEEECCeEEEEeeccccc
Q 025454 124 VVILYKDGFAECGLL-MQCLEELARKYPATKFVKIISTDC----------IPNYPDRNLPTVLVYNNGAVKANYVGLRSF 192 (252)
Q Consensus 124 VV~fya~wc~~Ck~l-~~~l~~LA~ky~~vkFvkI~~~~~----------~~~~~i~~lPTlliy~~G~~v~~~vG~~~~ 192 (252)
|+.|+++||++|+.+ .+.|..+.. +.+.|..++.+.. ...+++.++|++ |.+|+.++ |+..+
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~--~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~g~~ig---G~d~l 99 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV--PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YINGKHIG---GNDDL 99 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC--CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEE---SHHHH
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC--CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EECCEEEE---cHHHH
Confidence 555999999999999 888877552 3477888877532 356899999986 67998865 43322
Q ss_pred CCCCCHHHHHHHHHhcCC
Q 025454 193 GRRCTPEGVALVLCQSDP 210 (252)
Q Consensus 193 G~~~~~e~lE~~L~~~g~ 210 (252)
-.-.....|..+|...|+
T Consensus 100 ~~l~~~g~L~~~L~~~g~ 117 (118)
T 3c1r_A 100 QELRETGELEELLEPILA 117 (118)
T ss_dssp HHHHHHTHHHHHHHHHHC
T ss_pred HHHHHCCcHHHHHHHcCC
Confidence 000122456777766654
No 214
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.38 E-value=3.2e-07 Score=73.18 Aligned_cols=70 Identities=11% Similarity=0.214 Sum_probs=55.4
Q ss_pred CceEEEEEEc-CCCchhhhHHHHHHHHHHHCC--CceEEEEeccC------------------------CCCCCCCCc--
Q 025454 120 DVWVVVILYK-DGFAECGLLMQCLEELARKYP--ATKFVKIISTD------------------------CIPNYPDRN-- 170 (252)
Q Consensus 120 ~~~VVV~fya-~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~------------------------~~~~~~i~~-- 170 (252)
|++|||.||+ .||++|....|.|.++.++|. ++.|+-|..+. +...|++..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 4689999998 999999999999999999885 48888875531 114577766
Q ss_pred ----------ccEEEEE-ECCeEEEEeecc
Q 025454 171 ----------LPTVLVY-NNGAVKANYVGL 189 (252)
Q Consensus 171 ----------lPTlliy-~~G~~v~~~vG~ 189 (252)
+|+++++ ++|+++..+.|.
T Consensus 115 ~~~~~~~~~~~p~~~lid~~G~i~~~~~~~ 144 (163)
T 3gkn_A 115 NMYGKQVLGIERSTFLLSPEGQVVQAWRKV 144 (163)
T ss_dssp EETTEEEEEECCEEEEECTTSCEEEEECSC
T ss_pred ccccccccCcceEEEEECCCCeEEEEEcCC
Confidence 8988888 579998877443
No 215
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.33 E-value=3.8e-07 Score=72.80 Aligned_cols=69 Identities=12% Similarity=0.155 Sum_probs=54.1
Q ss_pred ceEEEEEE-cCCCchhhhHHHHHHHHHHHCCC-ceEEEEeccC------------------------CCCCCCCCccc--
Q 025454 121 VWVVVILY-KDGFAECGLLMQCLEELARKYPA-TKFVKIISTD------------------------CIPNYPDRNLP-- 172 (252)
Q Consensus 121 ~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~------------------------~~~~~~i~~lP-- 172 (252)
++|||+|| +.||++|....|.|.++.++|.. -.|+-|..+. +...|++...|
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~~ 115 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLS 115 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSSS
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccccC
Confidence 37899987 99999999999999999988863 1666664321 12468888888
Q ss_pred -----EEEEEECCeEEEEeeccc
Q 025454 173 -----TVLVYNNGAVKANYVGLR 190 (252)
Q Consensus 173 -----Tlliy~~G~~v~~~vG~~ 190 (252)
|++| ++|+++..+.|..
T Consensus 116 g~~~~~~li-~~G~i~~~~~g~~ 137 (159)
T 2a4v_A 116 GSIRSHFIF-VDGKLKFKRVKIS 137 (159)
T ss_dssp CBCCEEEEE-ETTEEEEEEESCC
T ss_pred CccceEEEE-cCCEEEEEEccCC
Confidence 7888 9999999998863
No 216
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.31 E-value=2.5e-07 Score=70.34 Aligned_cols=91 Identities=13% Similarity=0.127 Sum_probs=53.9
Q ss_pred hhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC-----------CCCCCCCCcccEEE
Q 025454 107 GSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD-----------CIPNYPDRNLPTVL 175 (252)
Q Consensus 107 ~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~-----------~~~~~~i~~lPTll 175 (252)
..++++.+.+.. . |+.|+++|||+|+.+.+.|.++. +.|..++.+. +...++..++|++
T Consensus 8 ~~~~~~~~i~~~---~-v~vy~~~~Cp~C~~~~~~L~~~~-----i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i- 77 (113)
T 3rhb_A 8 MEESIRKTVTEN---T-VVIYSKTWCSYCTEVKTLFKRLG-----VQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV- 77 (113)
T ss_dssp HHHHHHHHHHHS---S-EEEEECTTCHHHHHHHHHHHHTT-----CCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE-
T ss_pred HHHHHHHHHhcC---C-EEEEECCCChhHHHHHHHHHHcC-----CCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE-
Confidence 344555554443 2 56699999999999999998864 3344444432 1233588999998
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHhcCCC
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQSDPV 211 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g~i 211 (252)
|.+|+.++.+-.+..+ .....|..+|...|..
T Consensus 78 -fi~g~~igG~~~~~~~---~~~g~L~~~l~~~~~~ 109 (113)
T 3rhb_A 78 -FVCGKHIGGCTDTVKL---NRKGDLELMLAEANGK 109 (113)
T ss_dssp -EETTEEEESHHHHHHH---HHHTHHHHHHTC----
T ss_pred -EECCEEEcCcHHHHHH---HHcCCHHHHHHHHhhh
Confidence 6799887633222111 1233566677666543
No 217
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.30 E-value=4e-06 Score=65.61 Aligned_cols=98 Identities=9% Similarity=0.097 Sum_probs=75.7
Q ss_pred eEEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCCCCCCCCCcccEEEEEECC
Q 025454 102 VMPI-SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNG 180 (252)
Q Consensus 102 v~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~~~~~~i~~lPTlliy~~G 180 (252)
+..| +.+++...+... ..+||=|+++||++| .+.|.++|..+++++|+.+...+..+.|++. .|++++|+.+
T Consensus 23 ~~~i~s~~e~e~fi~~~---~v~VVGfF~~~~~~~---~~~F~~~A~~~~d~~F~~t~~~~v~~~~~v~-~~~vvlfkkf 95 (124)
T 2l4c_A 23 PTWLTDVPAAMEFIAAT---EVAVIGFFQDLEIPA---VPILHSMVQKFPGVSFGISTDSEVLTHYNIT-GNTICLFRLV 95 (124)
T ss_dssp CEECCSHHHHHHHHHTS---SEEEEEECSCTTSTH---HHHHHHHHHHCTTSEEEEECCHHHHHHTTCC-SSCEEEEETT
T ss_pred ceEcCCHHHHHHHHhcC---CCEEEEEECCCCChh---HHHHHHHHHhCCCceEEEEChHHHHHHcCCC-CCeEEEEEcC
Confidence 5567 567777777644 478999999999999 6789999999988999999877778889988 8999999987
Q ss_pred e-EEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 181 A-VKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 181 ~-~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
. ....+.|- .. ..++.+.|..|+..+
T Consensus 96 de~~~~~~g~-~~-~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 96 DNEQLNLEDE-DI-ESIDATKLSRFIEIN 122 (124)
T ss_dssp TTEEEEECHH-HH-TTCCHHHHHHHHHHH
T ss_pred CCCceeecCc-cc-CCCCHHHHHHHHHHh
Confidence 4 33333320 00 246899999999865
No 218
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.28 E-value=1.5e-06 Score=74.32 Aligned_cols=87 Identities=14% Similarity=0.164 Sum_probs=61.1
Q ss_pred CceEEEEEE-cCCCchhh-hHHHHHHHHHHHCC--Cc-eEEEEeccC------------C-------------CCCCCCC
Q 025454 120 DVWVVVILY-KDGFAECG-LLMQCLEELARKYP--AT-KFVKIISTD------------C-------------IPNYPDR 169 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck-~l~~~l~~LA~ky~--~v-kFvkI~~~~------------~-------------~~~~~i~ 169 (252)
|++|||.|| +.||++|. .-.|.|.+++.+|. ++ .++-|..+. . ...|++.
T Consensus 33 gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 112 (241)
T 1nm3_A 33 NKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGML 112 (241)
T ss_dssp TSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTCE
T ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCce
Confidence 468999999 99999999 89999999998874 58 888885431 0 1246654
Q ss_pred -----------cccEEEEEECCeEEEEeecccccCCC---CCHHHHHHHHH
Q 025454 170 -----------NLPTVLVYNNGAVKANYVGLRSFGRR---CTPEGVALVLC 206 (252)
Q Consensus 170 -----------~lPTlliy~~G~~v~~~vG~~~~G~~---~~~e~lE~~L~ 206 (252)
.+|+.+++++|.++..++|....|.. .+.+++-..|.
T Consensus 113 ~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~ 163 (241)
T 1nm3_A 113 VGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLA 163 (241)
T ss_dssp EECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHC
T ss_pred eecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhh
Confidence 34754444999999999987544432 34455544444
No 219
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.28 E-value=1.5e-06 Score=75.00 Aligned_cols=80 Identities=9% Similarity=0.164 Sum_probs=60.0
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc---------------------------------------
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST--------------------------------------- 160 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~--------------------------------------- 160 (252)
++.+|+.|+.+|||+|+.+.+.+..+... .+++|..+...
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~-g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~~ 175 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS-GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVPA 175 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT-TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCCS
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC-CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCccc
Confidence 45789999999999999999999988776 35777654321
Q ss_pred --------------CCCCCCCCCcccEEEEEE-CCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 161 --------------DCIPNYPDRNLPTVLVYN-NGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 161 --------------~~~~~~~i~~lPTlliy~-~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
.+...++|.++|||++.. +|+. ..+.|.. +.+.|+.+|.+
T Consensus 176 ~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~-~~~~G~~------~~~~L~~~l~~ 230 (241)
T 1v58_A 176 NVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL-QQAVGLP------DQKTLNIIMGN 230 (241)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE-EEEESSC------CHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE-EEecCCC------CHHHHHHHHHH
Confidence 012478999999999987 4854 5677753 46788887765
No 220
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.27 E-value=3.4e-06 Score=68.76 Aligned_cols=88 Identities=15% Similarity=-0.035 Sum_probs=61.0
Q ss_pred CceEEEEEE-cCCCchhhh-HHHHHHHHHHHCC--Cc-eEEEEeccC------------C--------------CCCCCC
Q 025454 120 DVWVVVILY-KDGFAECGL-LMQCLEELARKYP--AT-KFVKIISTD------------C--------------IPNYPD 168 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck~-l~~~l~~LA~ky~--~v-kFvkI~~~~------------~--------------~~~~~i 168 (252)
+++|||.|| +.||++|+. -.|.|.++..+|. ++ .++-|..+. + ...|++
T Consensus 31 Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~~gv 110 (167)
T 2wfc_A 31 GKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFTKAVDM 110 (167)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHHHHTTC
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHHHHcCC
Confidence 468888887 999999999 8999999888873 58 888885431 1 124565
Q ss_pred Cc-----------ccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhcC
Q 025454 169 RN-----------LPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQSD 209 (252)
Q Consensus 169 ~~-----------lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g 209 (252)
.. .|+.+|+++|+++...++....+ .+....+.+|.+.|
T Consensus 111 ~~~~~~~~g~~~~~p~t~lI~~G~I~~~~~~~~~~~--~~~~~~~~~~~~~~ 160 (167)
T 2wfc_A 111 ELDLSAVLGNVRSKRYSLVIEDGVVTKVNVEPDGKG--LTCSLAPNILSQLG 160 (167)
T ss_dssp EECCHHHHSSCEECCEEEEEETTEEEEEEECTTSSS--SSTTSHHHHHHHHC
T ss_pred ccccccccCcccceEEEEEEeCCEEEEEEecCCCCc--ceeccHHHHHHHhc
Confidence 43 38655559999999988765433 23344556666554
No 221
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.24 E-value=3.3e-06 Score=72.10 Aligned_cols=86 Identities=14% Similarity=0.192 Sum_probs=62.0
Q ss_pred CCceEEEEEE-cCCCchhhhHHHHHHHHHHHC--CCceEEEEeccC----------C---------------------CC
Q 025454 119 PDVWVVVILY-KDGFAECGLLMQCLEELARKY--PATKFVKIISTD----------C---------------------IP 164 (252)
Q Consensus 119 ~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky--~~vkFvkI~~~~----------~---------------------~~ 164 (252)
+|++|||.|| +.||++|....|.|.++.++| .++.|+-|..+. . ..
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 3479999999 999999999999999999988 468888775321 1 02
Q ss_pred CCCC-----CcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 165 NYPD-----RNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 165 ~~~i-----~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
.|++ ..+|+++|+ ++|+++...+|....+ .+.++|...|.
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~--~~~~ell~~l~ 180 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIG--RNVQEVLRTID 180 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCC--CCHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCC--CCHHHHHHHHH
Confidence 4666 368988888 5799999988754222 24455544443
No 222
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.24 E-value=3.6e-06 Score=71.05 Aligned_cols=85 Identities=13% Similarity=0.182 Sum_probs=61.6
Q ss_pred CceEEEEEE-cCCCchhhhHHHHHHHHHHHC--CCceEEEEeccC----------C-------C--------------CC
Q 025454 120 DVWVVVILY-KDGFAECGLLMQCLEELARKY--PATKFVKIISTD----------C-------I--------------PN 165 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky--~~vkFvkI~~~~----------~-------~--------------~~ 165 (252)
|++|||.|| +.||++|....|.|.++.++| .++.|+-|..+. . . ..
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 127 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 127 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHHH
Confidence 479999999 999999999999999999988 458888775321 1 0 24
Q ss_pred CCCC------cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 166 YPDR------NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 166 ~~i~------~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
|++. .+|+++|+ ++|+++..++|....|. +.+++...|.
T Consensus 128 ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~--~~~ell~~l~ 173 (211)
T 2pn8_A 128 YGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGR--SVDETLRLVQ 173 (211)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCC--CHHHHHHHHH
T ss_pred cCCcccCCCcccceEEEECCCCEEEEEEecCCCCCC--CHHHHHHHHH
Confidence 6663 58988888 57999999887543332 3455544443
No 223
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.21 E-value=4.2e-07 Score=76.50 Aligned_cols=42 Identities=17% Similarity=0.191 Sum_probs=37.9
Q ss_pred CceEEEEEEcCCCchhhhHHHHH---HHHHHHCCC-ceEEEEeccC
Q 025454 120 DVWVVVILYKDGFAECGLLMQCL---EELARKYPA-TKFVKIISTD 161 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l---~~LA~ky~~-vkFvkI~~~~ 161 (252)
++++||.||+.|||+|+.+.|.| .+|+++||+ ++|.+++...
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~ 158 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNF 158 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCc
Confidence 35899999999999999999999 999999985 9999998753
No 224
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.21 E-value=2.6e-06 Score=68.31 Aligned_cols=86 Identities=9% Similarity=-0.053 Sum_probs=61.0
Q ss_pred CceEEEEEEc-CCCchhhhHHHHHHHHHHHCCCceEEEEeccC------------C--------------CCCCCCC---
Q 025454 120 DVWVVVILYK-DGFAECGLLMQCLEELARKYPATKFVKIISTD------------C--------------IPNYPDR--- 169 (252)
Q Consensus 120 ~~~VVV~fya-~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~------------~--------------~~~~~i~--- 169 (252)
|++|||.||+ .||++|....|.|.++.++|.++.|+-|..+. . ...|++.
T Consensus 42 gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~ 121 (163)
T 1psq_A 42 GKKKVLSVVPSIDTGICSTQTRRFNEELAGLDNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLINE 121 (163)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBCTT
T ss_pred CCEEEEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCCcccc
Confidence 4689999995 99999999999999999999668888775431 1 0234444
Q ss_pred -c--ccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 170 -N--LPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 170 -~--lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
+ .|+++++ ++|+++..+.|... +.....+++...|.
T Consensus 122 ~g~~~p~~~liD~~G~i~~~~~g~~~-~~~~~~~~~l~~l~ 161 (163)
T 1psq_A 122 WHLLARAVFVLDTDNTIRYVEYVDNI-NSEPNFEAAIAAAK 161 (163)
T ss_dssp TCSBCCEEEEECTTCBEEEEEECSBT-TSCCCHHHHHHHHH
T ss_pred CCceEEEEEEEcCCCeEEEEEecCCc-CCCCCHHHHHHHHH
Confidence 2 3888887 58999999887532 23334455655554
No 225
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.21 E-value=1.3e-06 Score=76.40 Aligned_cols=85 Identities=8% Similarity=0.133 Sum_probs=62.6
Q ss_pred CceE-EEEEEcCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC------------------------------CCCCC
Q 025454 120 DVWV-VVILYKDGFAECGLLMQCLEELARKYP--ATKFVKIISTD------------------------------CIPNY 166 (252)
Q Consensus 120 ~~~V-VV~fya~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~------------------------------~~~~~ 166 (252)
|+++ |+.|+++||+.|....+.|.+++.+|. +++|+.|..+. +...|
T Consensus 33 GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~y 112 (249)
T 3a2v_A 33 GKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRL 112 (249)
T ss_dssp TCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHH
T ss_pred CCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHh
Confidence 3565 557899999999999999999999886 58888886531 11356
Q ss_pred CCC-------cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 167 PDR-------NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 167 ~i~-------~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
++. .+|+++|+ .+|.++..++|....|. +.++|...|.
T Consensus 113 gv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr--~~~Ellr~I~ 158 (249)
T 3a2v_A 113 GLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGR--LVDEILRIVK 158 (249)
T ss_dssp TCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCC--CHHHHHHHHH
T ss_pred CCccccCCCcccceEEEECCCCeEEEEEecCCcccc--hhHHHHHHHH
Confidence 665 89977777 58999999988765553 3455555543
No 226
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.14 E-value=8.9e-06 Score=65.58 Aligned_cols=86 Identities=13% Similarity=0.036 Sum_probs=59.3
Q ss_pred CCceEEEEEE-cCCCchhhhHHHHHHHHHHHCCCceEEEEeccC--------------------------CCCCCCCC--
Q 025454 119 PDVWVVVILY-KDGFAECGLLMQCLEELARKYPATKFVKIISTD--------------------------CIPNYPDR-- 169 (252)
Q Consensus 119 ~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~--------------------------~~~~~~i~-- 169 (252)
+|++|||.|| +.||++|....|.|.++.++|.++.|+-|..+. . ..|++.
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~ 124 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGMEGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EKYGVLIG 124 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GGGTCBBC
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHcCCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HHhCCEec
Confidence 3579999999 899999999999999999888668888774321 1 234443
Q ss_pred -------cccEEEEEE-CCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 170 -------NLPTVLVYN-NGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 170 -------~lPTlliy~-~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
.+|+++++. +|+++..+.|... ......+++...|.
T Consensus 125 ~~~~~g~~~p~~~liD~~G~i~~~~~~~~~-~~~~~~~~ll~~l~ 168 (171)
T 2yzh_A 125 EGALKGILARAVFIIDKEGKVAYVQLVPEI-TEEPNYDEVVNKVK 168 (171)
T ss_dssp SSTTTTSBCCEEEEECTTSBEEEEEECSBT-TSCCCCHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCeEEEEEeCCCc-CCCCCHHHHHHHHH
Confidence 258777775 7999888876421 12233455555444
No 227
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.10 E-value=1.3e-06 Score=70.09 Aligned_cols=88 Identities=16% Similarity=0.186 Sum_probs=55.5
Q ss_pred CCceEEEEEE-cCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC------------------------CCCCCCCC--
Q 025454 119 PDVWVVVILY-KDGFAECGLLMQCLEELARKYPA--TKFVKIISTD------------------------CIPNYPDR-- 169 (252)
Q Consensus 119 ~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~------------------------~~~~~~i~-- 169 (252)
+|++|||.|| +.||++|....|.|.++..+|.. +.++-|..+. ..+.|++.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~ 108 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWE 108 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccc
Confidence 3578999998 99999999999999998888753 7777775431 01245542
Q ss_pred ---------cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 170 ---------NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 170 ---------~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
..||.+|. ++|+++...+|... +.+...+++..+|..
T Consensus 109 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~-~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 109 FPALPGYVLAKRAVFVIDKEGKVRYKWVSDDP-TKEPPYDEIEKVVKS 155 (157)
T ss_dssp CTTSTTCEEECEEEEEECTTSBEEEEEEESST-TCCCCHHHHHHHHHH
T ss_pred cccCCCcceeeeeEEEECCCCEEEEEEECCCC-CCCCCHHHHHHHHHH
Confidence 35655555 68999988877532 234456777777754
No 228
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.10 E-value=1.1e-05 Score=66.42 Aligned_cols=85 Identities=13% Similarity=0.176 Sum_probs=60.3
Q ss_pred CceEEEEEEc-CCCchhhhHHHHHHHHHHHCC--CceEEEEeccC----------C------------------CCCCCC
Q 025454 120 DVWVVVILYK-DGFAECGLLMQCLEELARKYP--ATKFVKIISTD----------C------------------IPNYPD 168 (252)
Q Consensus 120 ~~~VVV~fya-~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~----------~------------------~~~~~i 168 (252)
|++|||.||+ .||++|....|.|.++.++|. ++.|+-|..+. . ...|++
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 109 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCC
Confidence 4689999995 999999999999999998875 57887774321 0 124666
Q ss_pred C------cccEEEEEE-CCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 169 R------NLPTVLVYN-NGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 169 ~------~lPTlliy~-~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
. .+|+.+++. +|+++..++|....+. ..++|...|.
T Consensus 110 ~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~--~~~~l~~~l~ 152 (186)
T 1n8j_A 110 MREDEGLADRATFVVDPQGIIQAIEVTAEGIGR--DASDLLRKIK 152 (186)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEECTTBCC--CHHHHHHHHH
T ss_pred ccCCCCceeeEEEEECCCCeEEEEEecCCCCCC--CHHHHHHHHH
Confidence 5 369888885 8999999887543322 3455544443
No 229
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.09 E-value=5.1e-06 Score=62.37 Aligned_cols=55 Identities=11% Similarity=0.125 Sum_probs=41.9
Q ss_pred eEEEEEEc-----CCCchhhhHHHHHHHHHHHCCCceEEEEeccCC-------CCCCCCCcccEEEEEECCeEEE
Q 025454 122 WVVVILYK-----DGFAECGLLMQCLEELARKYPATKFVKIISTDC-------IPNYPDRNLPTVLVYNNGAVKA 184 (252)
Q Consensus 122 ~VVV~fya-----~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~-------~~~~~i~~lPTlliy~~G~~v~ 184 (252)
.|+| |++ +||++|+.+.+.|..+. +.|..++.+.. ...++..++|+| |.+|+.++
T Consensus 18 ~vvv-f~~g~~~~~~C~~C~~~~~~L~~~~-----i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v--~i~g~~ig 84 (105)
T 2yan_A 18 SVML-FMKGNKQEAKCGFSKQILEILNSTG-----VEYETFDILEDEEVRQGLKAYSNWPTYPQL--YVKGELVG 84 (105)
T ss_dssp SEEE-EESBCSSSBCTTHHHHHHHHHHHHT-----CCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EETTEEEE
T ss_pred CEEE-EEecCCCCCCCccHHHHHHHHHHCC-----CCeEEEECCCCHHHHHHHHHHHCCCCCCeE--EECCEEEe
Confidence 3565 666 99999999999998874 67778877532 234688999998 56998765
No 230
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=98.08 E-value=1.2e-06 Score=63.70 Aligned_cols=78 Identities=13% Similarity=0.169 Sum_probs=50.4
Q ss_pred EEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC-------CCCCCCCcccEEEEEECCeEEEEeecccccCCC
Q 025454 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC-------IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRR 195 (252)
Q Consensus 123 VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~-------~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~ 195 (252)
.|+.|+++||++|+.+.+.|.++ ++.|..++.+.. ...+++.++|++ |.+|+.+..+..+..+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-----~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~i~g~~~i~~~--- 76 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-----GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVHVGGCDDLYAL--- 76 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-----TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEEEESHHHHHHH---
T ss_pred cEEEEECCCChhHHHHHHHHHHc-----CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEEEcCHHHHHHH---
Confidence 36778999999999999998875 366777766532 236789999975 5689765432222111
Q ss_pred CCHHHHHHHHHhcCCC
Q 025454 196 CTPEGVALVLCQSDPV 211 (252)
Q Consensus 196 ~~~e~lE~~L~~~g~i 211 (252)
.....|+.+|. .|++
T Consensus 77 ~~~~~l~~~l~-~g~~ 91 (92)
T 2khp_A 77 EDEGKLDSLLK-TGKL 91 (92)
T ss_dssp HTTTCHHHHHH-HSSC
T ss_pred HHcCCHHHHHh-ccCc
Confidence 11134666666 5654
No 231
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.08 E-value=1.2e-05 Score=64.50 Aligned_cols=70 Identities=14% Similarity=0.013 Sum_probs=54.1
Q ss_pred CceEEEEEE-cCCCchhh-hHHHHHHHHHHHCC--Cce-EEEEeccC------------C--------------CCCCCC
Q 025454 120 DVWVVVILY-KDGFAECG-LLMQCLEELARKYP--ATK-FVKIISTD------------C--------------IPNYPD 168 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck-~l~~~l~~LA~ky~--~vk-FvkI~~~~------------~--------------~~~~~i 168 (252)
|++|||.|| +.||++|. .-.|.|.++.++|. ++. ++-|..+. + ...|++
T Consensus 35 gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (162)
T 1tp9_A 35 GKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHALGL 114 (162)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHHTTC
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHHcCc
Confidence 468999999 89999999 88999999988874 577 88774321 1 124666
Q ss_pred C-----------cccEEEEEECCeEEEEeecc
Q 025454 169 R-----------NLPTVLVYNNGAVKANYVGL 189 (252)
Q Consensus 169 ~-----------~lPTlliy~~G~~v~~~vG~ 189 (252)
. .+|+.+|+.+|+++..++|.
T Consensus 115 ~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 115 ELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp EEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred ccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 4 27988887899999988886
No 232
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.08 E-value=3.1e-05 Score=64.75 Aligned_cols=71 Identities=15% Similarity=0.089 Sum_probs=53.7
Q ss_pred CCceEEEEEE-cCCCchhhhHHHHHHHHHHHCCCceEEEEeccC------CCCC--------------------CCCC--
Q 025454 119 PDVWVVVILY-KDGFAECGLLMQCLEELARKYPATKFVKIISTD------CIPN--------------------YPDR-- 169 (252)
Q Consensus 119 ~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~------~~~~--------------------~~i~-- 169 (252)
+|++|||.|| +.||++|....|.|.++.++|.++.|+-|..+. .... |++.
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv~~~ 156 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGELENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQAYGVAIT 156 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHHHTTCEEC
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHHHhCceee
Confidence 3578999999 789999999999999999999778888885431 1122 3332
Q ss_pred -------cccEEEEE-ECCeEEEEeecc
Q 025454 170 -------NLPTVLVY-NNGAVKANYVGL 189 (252)
Q Consensus 170 -------~lPTlliy-~~G~~v~~~vG~ 189 (252)
..|+++++ ++|+++...++.
T Consensus 157 ~~~~~g~~~p~~~lID~~G~I~~~~~~~ 184 (200)
T 3zrd_A 157 EGPLAGLTARAVVVLDGQDNVIYSELVN 184 (200)
T ss_dssp SSTTTTSBCCEEEEECTTSBEEEEEECS
T ss_pred cccCCCccccEEEEECCCCeEEEEEecC
Confidence 25888887 679998887764
No 233
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.02 E-value=7.1e-06 Score=65.92 Aligned_cols=85 Identities=11% Similarity=-0.071 Sum_probs=60.3
Q ss_pred CceEEEEEE-cCCCchhhhHHHHHHHHHHHCCCceEEEEeccC------------C--------------CCCCCCCc--
Q 025454 120 DVWVVVILY-KDGFAECGLLMQCLEELARKYPATKFVKIISTD------------C--------------IPNYPDRN-- 170 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~------------~--------------~~~~~i~~-- 170 (252)
|++|||.|| +.||++|....|.|.++.++ .++.++-|..+. . ...|++..
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~ 124 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK-EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEE 124 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT-TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEETT
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc-CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCcccc
Confidence 468999998 78999999999999999887 778888875431 1 12355554
Q ss_pred ----ccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 171 ----LPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 171 ----lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
+|+++++ ++|+++..+++.. .+.....+.+...|.
T Consensus 125 ~g~~~p~~~liD~~G~i~~~~~~~~-~~~~~~~~~il~~l~ 164 (166)
T 3p7x_A 125 LRLLARAVFVLDADNKVVYKEIVSE-GTDFPDFDAALAAYK 164 (166)
T ss_dssp TTEECCEEEEECTTCBEEEEEECSB-TTSCCCHHHHHHHHH
T ss_pred CCceeeEEEEECCCCeEEEEEEcCC-cccCCCHHHHHHHHh
Confidence 7988887 5899998877642 223344566655554
No 234
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.01 E-value=9.4e-06 Score=66.37 Aligned_cols=70 Identities=9% Similarity=0.160 Sum_probs=52.1
Q ss_pred CCceEEEEEE-cCCCchhhhHHHHHHHHHHHCCC--ceEEEEeccC------------------------CCCCCCCCc-
Q 025454 119 PDVWVVVILY-KDGFAECGLLMQCLEELARKYPA--TKFVKIISTD------------------------CIPNYPDRN- 170 (252)
Q Consensus 119 ~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~~~------------------------~~~~~~i~~- 170 (252)
+|++|||.|| +.||++|....|.|.++..+|.. +.++-|..+. +...|++..
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~ 129 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKE 129 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCccc
Confidence 3468999998 99999999999999999998854 7777774431 113466643
Q ss_pred -----------ccEEEEE-ECCeEEEEeec
Q 025454 171 -----------LPTVLVY-NNGAVKANYVG 188 (252)
Q Consensus 171 -----------lPTlliy-~~G~~v~~~vG 188 (252)
+|+++|+ ++|+++..+.+
T Consensus 130 ~~~~g~~~~~~~p~~~lID~~G~I~~~~~~ 159 (179)
T 3ixr_A 130 KTMYGRQVIGIERSTFLIGPTHRIVEAWRQ 159 (179)
T ss_dssp ECCC--CEEEECCEEEEECTTSBEEEEECS
T ss_pred ccccCcccCCcceEEEEECCCCEEEEEEcC
Confidence 5777777 58999887744
No 235
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.01 E-value=3e-06 Score=61.33 Aligned_cols=55 Identities=9% Similarity=0.218 Sum_probs=42.0
Q ss_pred EEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc-----CCCCCC-CCCcccEEEEEECCeEEE
Q 025454 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST-----DCIPNY-PDRNLPTVLVYNNGAVKA 184 (252)
Q Consensus 123 VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~-----~~~~~~-~i~~lPTlliy~~G~~v~ 184 (252)
.|+.|+++||+.|+.+.+.|.++. +.|..++.+ .+...+ ++.++|+++ .+|+.+.
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~-----i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~i~ 67 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG-----VKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYHVG 67 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT-----CCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEECC
T ss_pred eEEEEECCCChhHHHHHHHHHHcC-----CCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEEEe
Confidence 367799999999999999998863 567777665 233567 899999984 4887653
No 236
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.01 E-value=1.8e-05 Score=68.26 Aligned_cols=86 Identities=13% Similarity=0.199 Sum_probs=62.4
Q ss_pred CCceEEEEEEc-CCCchhhhHHHHHHHHHHHCC--CceEEEEeccC----------C---------------------CC
Q 025454 119 PDVWVVVILYK-DGFAECGLLMQCLEELARKYP--ATKFVKIISTD----------C---------------------IP 164 (252)
Q Consensus 119 ~~~~VVV~fya-~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~----------~---------------------~~ 164 (252)
+|++|||.||+ .||++|....|.|.++..+|. ++.++-|..+. . ..
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 35799999999 999999999999999999985 47888774331 0 13
Q ss_pred CCCCC------cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 165 NYPDR------NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 165 ~~~i~------~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
.|++. .+|+++|+ ++|+++..+++....|. ..+++...|.
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~--~~~eil~~l~ 202 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGR--SVDETLRLVQ 202 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCC--CHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCC--CHHHHHHHHH
Confidence 46666 68988887 58999998887544332 3444444443
No 237
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.98 E-value=1.3e-05 Score=66.48 Aligned_cols=85 Identities=16% Similarity=0.114 Sum_probs=57.2
Q ss_pred ceEEEE-EEcCCCchhhh-HHHHHHHHHHHCC--Cce-EEEEeccC------------C--------------CCCCCCC
Q 025454 121 VWVVVI-LYKDGFAECGL-LMQCLEELARKYP--ATK-FVKIISTD------------C--------------IPNYPDR 169 (252)
Q Consensus 121 ~~VVV~-fya~wc~~Ck~-l~~~l~~LA~ky~--~vk-FvkI~~~~------------~--------------~~~~~i~ 169 (252)
++|||. |++.||++|+. -.|.|.+++.+|. ++. ++-|..+. + ...|++.
T Consensus 57 k~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~ 136 (184)
T 3uma_A 57 KRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIGME 136 (184)
T ss_dssp SEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCE
T ss_pred CCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHHcCCc
Confidence 455554 56999999999 6999999999884 477 88775432 1 1246664
Q ss_pred -----------cccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 170 -----------NLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 170 -----------~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
..|+.+|..+|.++...+|... ..++...++.+|.+
T Consensus 137 ~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~~~--g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 137 IDLSAGTLGIRSKRYSMLVEDGVVKALNIEESP--GQATASGAAAMLEL 183 (184)
T ss_dssp EEEGGGTCEEEECCEEEEEETTEEEEEEECSST--TCCSTTSHHHHHHH
T ss_pred eeccccCCcccceeEEEEECCCEEEEEEEeCCC--CCCcCCCHHHHHhh
Confidence 2465555599999999988542 12344556666653
No 238
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.97 E-value=1.3e-05 Score=64.88 Aligned_cols=85 Identities=12% Similarity=0.046 Sum_probs=61.3
Q ss_pred CceEEEEEEcCCCc-hhhhHHHHHHHHHHHCC----CceEEEEecc--CC------------------------------
Q 025454 120 DVWVVVILYKDGFA-ECGLLMQCLEELARKYP----ATKFVKIIST--DC------------------------------ 162 (252)
Q Consensus 120 ~~~VVV~fya~wc~-~Ck~l~~~l~~LA~ky~----~vkFvkI~~~--~~------------------------------ 162 (252)
|++|||.||+.||+ .|....+.|.++.++|. ++.|+-|..+ +.
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 57999999999997 69999999999999884 4788777543 00
Q ss_pred --CCCCC---------CCcccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHHhcC
Q 025454 163 --IPNYP---------DRNLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLCQSD 209 (252)
Q Consensus 163 --~~~~~---------i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g 209 (252)
...|+ +...|+++++ ++|+++..+.|. ....++|...|.+..
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~-----~~~~~~i~~~l~~~~ 161 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGV-----NYNYLEFVNALRLAR 161 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESS-----SCCHHHHHHHHHHHT
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCC-----CCCHHHHHHHHHHhh
Confidence 01122 2345755555 689998887765 456888888887753
No 239
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.97 E-value=0.00014 Score=66.28 Aligned_cols=119 Identities=9% Similarity=0.051 Sum_probs=84.8
Q ss_pred hhcCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC---ceEEEEeccCCCC-------
Q 025454 95 KISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPA---TKFVKIISTDCIP------- 164 (252)
Q Consensus 95 ~~~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~---vkFvkI~~~~~~~------- 164 (252)
....+..|.+++.+++........+ .+.+|.|+..+|+.|..+.+.|..+|++|.+ +.|+.|++.....
T Consensus 223 ~~~~~p~v~elt~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~ 301 (367)
T 3us3_A 223 EEHRRSTLRKLKPESMYETWEDDMD-GIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEK 301 (367)
T ss_dssp HHTCSCSEEECCGGGHHHHHHSCBT-TEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHH
T ss_pred HHcCccceeecChhhHHHHHhhccC-CcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHH
Confidence 3355778999999998877764322 3566779999999999999999999999985 9999999886542
Q ss_pred CCCCC-cccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh--cCCCCCC
Q 025454 165 NYPDR-NLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ--SDPVLND 214 (252)
Q Consensus 165 ~~~i~-~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~--~g~i~~~ 214 (252)
.|++. .+|+++++...........+...+..++.+.|..||.. .|-+.+.
T Consensus 302 ~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~p~ 354 (367)
T 3us3_A 302 TFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINTE 354 (367)
T ss_dssp HHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSCC-
T ss_pred hcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcCCcCcc
Confidence 27776 89999999854321111111111136899999999986 4544443
No 240
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.94 E-value=2e-05 Score=63.21 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=35.6
Q ss_pred CceEEEEEE-cCCCchhhhHHHHHHHHHHHCCCceEEEEec
Q 025454 120 DVWVVVILY-KDGFAECGLLMQCLEELARKYPATKFVKIIS 159 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~ 159 (252)
|++|||.|| +.||++|....|.|.++.++|.++.|+-|..
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~v~vv~Is~ 83 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKLSNTIVLCISA 83 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHSTTEEEEEEES
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 468999999 8999999999999999999997788888854
No 241
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.93 E-value=4.3e-06 Score=60.67 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=47.5
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEec----------cCCCCCCCCCcccEEEEEECCeEEEEeecccccC
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIIS----------TDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFG 193 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~----------~~~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G 193 (252)
|+.|+++||++|+.+.+.|.++.-. ..++.|+. ..+...+++.++|+|++ +|+.+ .|
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~gi~---~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~i---~G----- 80 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREGVD---FEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKHV---LG----- 80 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHTCC---CEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEEE---ES-----
T ss_pred EEEEECCCChHHHHHHHHHHHcCCC---cEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEEE---eC-----
Confidence 5668899999999999999887533 23444431 11224678899999987 88543 34
Q ss_pred CCCCHHHHHHHHH
Q 025454 194 RRCTPEGVALVLC 206 (252)
Q Consensus 194 ~~~~~e~lE~~L~ 206 (252)
++.+.|..+|.
T Consensus 81 --~~~~~l~~~l~ 91 (92)
T 3ic4_A 81 --YNEEKLKELIR 91 (92)
T ss_dssp --CCHHHHHHHHH
T ss_pred --CCHHHHHHHhc
Confidence 35788888875
No 242
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.92 E-value=1.5e-05 Score=56.09 Aligned_cols=54 Identities=15% Similarity=0.162 Sum_probs=40.5
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC-------CCCCCCCcccEEEEEECCeEEE
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC-------IPNYPDRNLPTVLVYNNGAVKA 184 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~-------~~~~~i~~lPTlliy~~G~~v~ 184 (252)
|+.|+++||+.|+.+.+.|.++ ++.|..++.+.. ...+++.++|+++ .+|+.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i~ 63 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-----GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHIG 63 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHC-----CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEEe
Confidence 5668999999999999999875 356666665432 2457899999984 5897653
No 243
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=97.90 E-value=3.9e-05 Score=65.09 Aligned_cols=99 Identities=9% Similarity=0.057 Sum_probs=72.6
Q ss_pred ceEEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCCCCCCCCCcccEEEEEEC
Q 025454 101 SVMPI-SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNN 179 (252)
Q Consensus 101 ~v~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~~~~~~i~~lPTlliy~~ 179 (252)
.+.+| +.+++...+... ..+||-||++| |..+.+.|.++|..+..++|......+++.+|++++ |||++|+.
T Consensus 10 ~~~~l~s~~~~~~~l~~~---~v~vVgff~~~---~~~~~~~f~~~A~~l~~~~F~~t~~~~v~~~~~v~~-p~i~lfk~ 82 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIAAT---EVAVIGFFQDL---EIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNITG-NTICLFRL 82 (227)
T ss_dssp CCEECCSHHHHHHHHHTS---SEEEEEECSCS---CSTHHHHHHHHTTTCTTSEEEEECCHHHHHHTTCCS-SEEEEEET
T ss_pred CCeeeCCHHHHHHHHhcC---CeEEEEEecCC---CchhHHHHHHHHHhCCCceEEEECCHHHHHHcCCCC-CeEEEEEe
Confidence 46777 668888877654 48899999998 678899999999999889999887666778899988 99999997
Q ss_pred Ce-EEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 180 GA-VKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 180 G~-~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
+. ....+.|. +...++.+.|..|+..+
T Consensus 83 ~~~~~~~~~~~--~~g~~~~~~l~~fi~~~ 110 (227)
T 4f9z_D 83 VDNEQLNLEDE--DIESIDATKLSRFIEIN 110 (227)
T ss_dssp TTTEEEEECHH--HHHTCCHHHHHHHHHHH
T ss_pred cCccccccccc--ccCCCCHHHHHHHHHHh
Confidence 53 22223321 00134667777777653
No 244
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.89 E-value=4e-05 Score=65.21 Aligned_cols=39 Identities=5% Similarity=-0.053 Sum_probs=33.7
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEe
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKII 158 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~ 158 (252)
+|++|||.|||+||++|+ -.|.|++|.++|.. +.++-|.
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs 95 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFP 95 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEE
Confidence 457999999999999999 78899999999864 7777775
No 245
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.85 E-value=4.8e-05 Score=64.19 Aligned_cols=39 Identities=8% Similarity=-0.065 Sum_probs=33.3
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC--ceEEEEe
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA--TKFVKII 158 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~ 158 (252)
+|++|||+||++||++| .-.|.|.+|.++|.. +.++-|.
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs 77 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFP 77 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEE
Confidence 45799999999999999 567899999999864 7788775
No 246
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.85 E-value=1.9e-05 Score=65.00 Aligned_cols=42 Identities=14% Similarity=0.281 Sum_probs=37.6
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEecc
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIIST 160 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~ 160 (252)
.++++||.||++||++|+.+.|.|.+++++|++ +.|..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 457899999999999999999999999999995 888888764
No 247
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.83 E-value=5.5e-05 Score=56.40 Aligned_cols=66 Identities=18% Similarity=0.267 Sum_probs=45.0
Q ss_pred EEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC--------CC----CCCCCCcccEEEEEECC-eEEEEeecc
Q 025454 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD--------CI----PNYPDRNLPTVLVYNNG-AVKANYVGL 189 (252)
Q Consensus 123 VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~--------~~----~~~~i~~lPTlliy~~G-~~v~~~vG~ 189 (252)
.|+.|+++||++|+.+.+.|.++. +.|-.++.+. +. ..++..++|+|++ +| +.+ .|
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~~-----i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~~~i---gg- 91 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDLG-----VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDEKAI---VG- 91 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHT-----BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTTEEE---ES-
T ss_pred eEEEEcCCCCchHHHHHHHHHHcC-----CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCCEEE---Ec-
Confidence 466699999999999999998874 3344444432 11 2368999999876 44 433 23
Q ss_pred cccCCCCCHHHHHHHH
Q 025454 190 RSFGRRCTPEGVALVL 205 (252)
Q Consensus 190 ~~~G~~~~~e~lE~~L 205 (252)
++.+.|+.+|
T Consensus 92 ------~~~~~l~~~L 101 (103)
T 3nzn_A 92 ------FKEKEIRESL 101 (103)
T ss_dssp ------CCHHHHHHHT
T ss_pred ------CCHHHHHHHh
Confidence 4567777766
No 248
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.80 E-value=5.9e-05 Score=55.92 Aligned_cols=75 Identities=16% Similarity=0.143 Sum_probs=54.2
Q ss_pred EEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCCC-------C-CCCCCcccEEEEEECCeEEEEeecccccCC
Q 025454 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCI-------P-NYPDRNLPTVLVYNNGAVKANYVGLRSFGR 194 (252)
Q Consensus 123 VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~~-------~-~~~i~~lPTlliy~~G~~v~~~vG~~~~G~ 194 (252)
-|+-|..+|||.|+.....|.+. ++.|..++.+.-. + ..+.+++|+++| .||..+ +|
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~-----gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg~~l---~~------ 69 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN-----RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADGSTL---TN------ 69 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT-----TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTSCEE---ES------
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc-----CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCCEEE---eC------
Confidence 36678899999999999888763 4777778765321 1 236789999754 677543 23
Q ss_pred CCCHHHHHHHHHhcCCCCC
Q 025454 195 RCTPEGVALVLCQSDPVLN 213 (252)
Q Consensus 195 ~~~~e~lE~~L~~~g~i~~ 213 (252)
++.++|+.+|.+.+.+..
T Consensus 70 -~~~~el~~~L~el~gL~~ 87 (92)
T 2lqo_A 70 -PSADEVKAKLVKIAGLEH 87 (92)
T ss_dssp -CCHHHHHHHHHHHHCCSC
T ss_pred -CCHHHHHHHHHHhcCCcc
Confidence 468899999999877653
No 249
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.78 E-value=6.1e-05 Score=61.82 Aligned_cols=86 Identities=17% Similarity=0.073 Sum_probs=58.2
Q ss_pred CceEEEEEE-cCCCchhhh-HHHHHHHHHHHCC--CceEEE-EeccC------------C--------------CCCCCC
Q 025454 120 DVWVVVILY-KDGFAECGL-LMQCLEELARKYP--ATKFVK-IISTD------------C--------------IPNYPD 168 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck~-l~~~l~~LA~ky~--~vkFvk-I~~~~------------~--------------~~~~~i 168 (252)
+++|||.|| +.||++|.. -.|.|.+++.+|. ++.++- |..+. + ...|++
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv 122 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDL 122 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHHHHTC
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHHHhCC
Confidence 356766665 999999994 7899999998874 477775 53321 1 123544
Q ss_pred C-------------cccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 169 R-------------NLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 169 ~-------------~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
. ..|+.+|..+|.++...++....|.+. .+++.+|.+
T Consensus 123 ~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~--~~~~~vl~~ 172 (173)
T 3mng_A 123 LLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTC--SLAPNIISQ 172 (173)
T ss_dssp BCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSST--TSHHHHHHH
T ss_pred CcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcch--HHHHHHHHh
Confidence 3 458777777999999998876555433 445666553
No 250
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.74 E-value=3e-05 Score=59.11 Aligned_cols=65 Identities=14% Similarity=0.151 Sum_probs=44.6
Q ss_pred hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC----------CCCCCCCCcccEEEEE
Q 025454 108 SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD----------CIPNYPDRNLPTVLVY 177 (252)
Q Consensus 108 ~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~----------~~~~~~i~~lPTlliy 177 (252)
+.+.+.+... .| +.|+++|||.|+.+.+.|..+. +.|..++.+. +....+..++|++++
T Consensus 8 ~~~~~~i~~~----~v-~vy~~~~Cp~C~~ak~~L~~~~-----i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi- 76 (114)
T 3h8q_A 8 RHLVGLIERS----RV-VIFSKSYCPHSTRVKELFSSLG-----VECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV- 76 (114)
T ss_dssp HHHHHHHHHC----SE-EEEECTTCHHHHHHHHHHHHTT-----CCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE-
T ss_pred HHHHHHhccC----CE-EEEEcCCCCcHHHHHHHHHHcC-----CCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE-
Confidence 4455555443 24 4499999999999999998863 4555565542 124457789999855
Q ss_pred ECCeEEE
Q 025454 178 NNGAVKA 184 (252)
Q Consensus 178 ~~G~~v~ 184 (252)
+|+.++
T Consensus 77 -~g~~ig 82 (114)
T 3h8q_A 77 -NKVHVG 82 (114)
T ss_dssp -TTEEEE
T ss_pred -CCEEEe
Confidence 998776
No 251
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.73 E-value=3.5e-05 Score=63.93 Aligned_cols=42 Identities=12% Similarity=0.089 Sum_probs=37.2
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEecc
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIIST 160 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~~ 160 (252)
+++++||.|+..|||+|+.+.|.+.+++++|++ +.|..++..
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCC
Confidence 357899999999999999999999999999996 888887654
No 252
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.71 E-value=6.5e-06 Score=66.68 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=51.6
Q ss_pred CCceEEEEEE-cCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC------------------------CCCCCCCC--
Q 025454 119 PDVWVVVILY-KDGFAECGLLMQCLEELARKYP--ATKFVKIISTD------------------------CIPNYPDR-- 169 (252)
Q Consensus 119 ~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~------------------------~~~~~~i~-- 169 (252)
+|++|||.|| +.||++|..-.|.|.++..+|. ++.++-|..+. ....|++.
T Consensus 32 ~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~ 111 (164)
T 4gqc_A 32 RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVYHE 111 (164)
T ss_dssp TSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCccc
Confidence 3468999998 9999999998888988888885 38888775431 01345552
Q ss_pred --------cccEEEEE-ECCeEEEEeeccc
Q 025454 170 --------NLPTVLVY-NNGAVKANYVGLR 190 (252)
Q Consensus 170 --------~lPTlliy-~~G~~v~~~vG~~ 190 (252)
..|+.+|. ++|.++..+++..
T Consensus 112 ~~~~~~~~~~p~tflID~~G~I~~~~~~~~ 141 (164)
T 4gqc_A 112 DLKGLKMVAKRAVFIVKPDGTVAYKWVTDN 141 (164)
T ss_dssp EETTEEEEECCEEEEECTTSBEEEEEECSC
T ss_pred ccccCcCCeeeEEEEECCCCEEEEEEEeCC
Confidence 35655555 6899988877654
No 253
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.70 E-value=5.7e-05 Score=56.39 Aligned_cols=56 Identities=13% Similarity=0.109 Sum_probs=41.4
Q ss_pred eEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCC-------CCCC-CCCcccEEEEEECCeEEE
Q 025454 122 WVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDC-------IPNY-PDRNLPTVLVYNNGAVKA 184 (252)
Q Consensus 122 ~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~-------~~~~-~i~~lPTlliy~~G~~v~ 184 (252)
.-|+.|+++||+.|+.+.+.|.++. +.|..++.+.. .... +..++|++ |.+|+.++
T Consensus 16 ~~v~vy~~~~Cp~C~~ak~~L~~~~-----i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~ig 79 (99)
T 3qmx_A 16 AKIEIYTWSTCPFCMRALALLKRKG-----VEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQHIG 79 (99)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHHT-----CCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEEEE
T ss_pred CCEEEEEcCCChhHHHHHHHHHHCC-----CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEEEe
Confidence 3466799999999999999998874 55666665432 1233 88999987 56998765
No 254
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.70 E-value=7.5e-05 Score=65.06 Aligned_cols=85 Identities=13% Similarity=0.197 Sum_probs=60.0
Q ss_pred CCceEEEEEE-cCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC----------C---------------------CC
Q 025454 119 PDVWVVVILY-KDGFAECGLLMQCLEELARKYP--ATKFVKIISTD----------C---------------------IP 164 (252)
Q Consensus 119 ~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~----------~---------------------~~ 164 (252)
+|++|||.|| +.||++|....|.|.++.++|. ++.++-|..+. . ..
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 3579999999 9999999999999999999985 47888775431 0 02
Q ss_pred CCCCC------cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHH
Q 025454 165 NYPDR------NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVL 205 (252)
Q Consensus 165 ~~~i~------~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L 205 (252)
.|++. .+|+++|+ ++|.++..+++....|. ..+++...|
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~--~~~eil~~L 215 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGR--SVDETLRLV 215 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCC--CHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeEEEEEecCCCCCC--CHHHHHHHH
Confidence 34443 47877777 58999998887544432 344444444
No 255
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.65 E-value=1e-05 Score=63.47 Aligned_cols=57 Identities=19% Similarity=0.186 Sum_probs=40.4
Q ss_pred EEEEEcCCCchhhhH-HHHHHHHHHHCCCceEEEEeccC----------CCCCCCCCcccEEEEEECCeEEE
Q 025454 124 VVILYKDGFAECGLL-MQCLEELARKYPATKFVKIISTD----------CIPNYPDRNLPTVLVYNNGAVKA 184 (252)
Q Consensus 124 VV~fya~wc~~Ck~l-~~~l~~LA~ky~~vkFvkI~~~~----------~~~~~~i~~lPTlliy~~G~~v~ 184 (252)
|+.|+++|||.|+.+ .+.|..+...+ +.|..++.+. +...++..++|++ |.+|+.++
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~~~--i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--fi~g~~ig 106 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNVPK--SKALVLELDEMSNGSEIQDALEEISGQKTVPNV--YINGKHIG 106 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCCCG--GGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEE
T ss_pred EEEEECCCCCchHHHHHHHHHhcCccC--CCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--EECCEEEc
Confidence 567899999999999 88887765322 4455554432 2345788999995 67998765
No 256
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.64 E-value=0.00045 Score=62.10 Aligned_cols=108 Identities=12% Similarity=0.014 Sum_probs=78.6
Q ss_pred cCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC---CceEEEEeccCCC-------CCC
Q 025454 97 SRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP---ATKFVKIISTDCI-------PNY 166 (252)
Q Consensus 97 ~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~---~vkFvkI~~~~~~-------~~~ 166 (252)
..++.|.+++.+++..... .+.....++.|+.+||+.|..+.+.|..+|++|. .+.|+.+++.... +.|
T Consensus 223 ~~~p~v~elt~~~~~~~~~-~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~ 301 (350)
T 1sji_A 223 HQRPTLRRLRPEDMFETWE-DDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTF 301 (350)
T ss_dssp HCCCSEEECCTTTHHHHHH-SCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHC
T ss_pred cCccchhhcChhhHHHHhc-CCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhc
Confidence 4567899999999987654 3211234555999999999999999999999996 4999999987532 467
Q ss_pred CCC-cccEEEEEEC--CeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 167 PDR-NLPTVLVYNN--GAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 167 ~i~-~lPTlliy~~--G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
++. .+|+++++.. |... .+. +.+....++.+.|..|+..
T Consensus 302 gi~~~~P~~~i~~~~~~~~~-~~~-~~~~~~~~~~~~i~~F~~d 343 (350)
T 1sji_A 302 KIDLFKPQIGVVNVTDADSV-WME-IPDDDDLPTAEELEDWIED 343 (350)
T ss_dssp CSCTTSCEEEEEESSSSCEE-ESC-SSCCSCCCCHHHHHHHHHH
T ss_pred CCCccCCcEEEEeccccccc-ccC-CCcccccCCHHHHHHHHHH
Confidence 887 5899999985 3222 110 1121236889999999986
No 257
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.58 E-value=0.00027 Score=57.30 Aligned_cols=40 Identities=13% Similarity=0.099 Sum_probs=31.8
Q ss_pred CCceEEEEEEcCCCc-hhhhHHHHHHHHHHHC----CCceEEEEe
Q 025454 119 PDVWVVVILYKDGFA-ECGLLMQCLEELARKY----PATKFVKII 158 (252)
Q Consensus 119 ~~~~VVV~fya~wc~-~Ck~l~~~l~~LA~ky----~~vkFvkI~ 158 (252)
+|++|||.||.+||+ .|....+.|.++.+.+ .++.|+-|.
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~is 75 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFS 75 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeee
Confidence 457999999999996 7998888888876654 247777774
No 258
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.57 E-value=0.00033 Score=56.32 Aligned_cols=38 Identities=21% Similarity=0.299 Sum_probs=33.4
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEE
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKI 157 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI 157 (252)
+.++||.|+.-.||+|+.+.+.+..+.++|+. ++|..+
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~ 59 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKN 59 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEE
Confidence 35789999999999999999999999999986 777654
No 259
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.55 E-value=3.8e-05 Score=63.53 Aligned_cols=41 Identities=17% Similarity=0.206 Sum_probs=36.1
Q ss_pred ceEEEEEEcCCCchhhhHHHHH---HHHHHHCCC-ceEEEEeccC
Q 025454 121 VWVVVILYKDGFAECGLLMQCL---EELARKYPA-TKFVKIISTD 161 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l---~~LA~ky~~-vkFvkI~~~~ 161 (252)
.++||.||+.|||+|+.+.|.+ ..++++|++ ++|+.++..-
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 59 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSL 59 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSS
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechh
Confidence 4789999999999999999987 689999985 9999998753
No 260
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.53 E-value=0.00016 Score=57.91 Aligned_cols=75 Identities=13% Similarity=0.216 Sum_probs=54.1
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEec---------------------------------------c
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIS---------------------------------------T 160 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~---------------------------------------~ 160 (252)
+..+||.|+.++||.|+.+.+.+.++ ++++|+.+.. .
T Consensus 14 a~~~vv~f~D~~Cp~C~~~~~~l~~l----~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~~~ 89 (147)
T 3gv1_A 14 GKLKVAVFSDPDCPFCKRLEHEFEKM----TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGS 89 (147)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHTTC----CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTTCC
T ss_pred CCEEEEEEECCCChhHHHHHHHHhhc----CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCccH
Confidence 46889999999999999999988654 6666654311 0
Q ss_pred CC----------CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 161 DC----------IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 161 ~~----------~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
.| ...++|+++|||++ .||+. +.|.. +.+.|+.+|.+.
T Consensus 90 ~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~~---i~G~~------~~~~l~~~i~~~ 137 (147)
T 3gv1_A 90 ICDNPVAETTSLGEQFGFNGTPTLVF-PNGRT---QSGYS------PMPQLEEIIRKN 137 (147)
T ss_dssp CCSCSHHHHHHHHHHTTCCSSCEEEC-TTSCE---EESCC------CTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCccCEEEE-ECCEE---eeCCC------CHHHHHHHHHHH
Confidence 01 13689999999998 78874 55653 457788888764
No 261
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.53 E-value=0.00018 Score=61.94 Aligned_cols=84 Identities=12% Similarity=0.115 Sum_probs=59.8
Q ss_pred ceEEEEEE-cCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC----------------C--C--------------CC
Q 025454 121 VWVVVILY-KDGFAECGLLMQCLEELARKYP--ATKFVKIISTD----------------C--I--------------PN 165 (252)
Q Consensus 121 ~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~----------------~--~--------------~~ 165 (252)
++|||.|| ++||+.|....+.|.++..+|. +++++-|..+. . . ..
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ 109 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVK 109 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHHH
Confidence 38999998 9999999999999999988874 47777774321 1 0 24
Q ss_pred CCCC------------cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 166 YPDR------------NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 166 ~~i~------------~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
|++. .+|+++|+ .+|+++..+++....|. +.++|...|.
T Consensus 110 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr--~~~eilr~l~ 161 (233)
T 2v2g_A 110 LGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGR--NFSEILRVID 161 (233)
T ss_dssp TTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCC--CHHHHHHHHH
T ss_pred hCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCC--CHHHHHHHHH
Confidence 5553 57888888 57999999887654454 3455555443
No 262
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.51 E-value=0.00022 Score=57.89 Aligned_cols=39 Identities=10% Similarity=0.026 Sum_probs=32.3
Q ss_pred ceEEEEEEcCCCchhhhH-HHHHHHHHHHCC--Cce-EEEEec
Q 025454 121 VWVVVILYKDGFAECGLL-MQCLEELARKYP--ATK-FVKIIS 159 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l-~~~l~~LA~ky~--~vk-FvkI~~ 159 (252)
..||+.||+.||++|+.- .|.|.++..+|. ++. ++-|..
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~ 87 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAI 87 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEES
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 366778999999999998 899999988874 577 888754
No 263
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.48 E-value=9.7e-05 Score=52.54 Aligned_cols=57 Identities=18% Similarity=0.170 Sum_probs=39.2
Q ss_pred EEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc-------CCCCCCCC-----CcccEEEEEECCeEEE
Q 025454 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST-------DCIPNYPD-----RNLPTVLVYNNGAVKA 184 (252)
Q Consensus 123 VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~-------~~~~~~~i-----~~lPTlliy~~G~~v~ 184 (252)
.|+.|+++||+.|+.+...|..+... ..++.|+.. ++...++. .++|++++ +|+.+.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~i~---~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i~ 73 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENNIA---FDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHIG 73 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTCC---CEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEEE
T ss_pred EEEEEEcCCChhHHHHHHHHHHcCCC---ceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEEe
Confidence 47778899999999999988775422 345555432 12234444 99999855 897664
No 264
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.40 E-value=0.00018 Score=54.15 Aligned_cols=64 Identities=11% Similarity=0.096 Sum_probs=44.4
Q ss_pred hHHHHHHcCCCCceEEEEEEc-----CCCchhhhHHHHHHHHHHHCCCceEEEEeccCC-------CCCCCCCcccEEEE
Q 025454 109 DFVREVSQAPPDVWVVVILYK-----DGFAECGLLMQCLEELARKYPATKFVKIISTDC-------IPNYPDRNLPTVLV 176 (252)
Q Consensus 109 ~f~~~V~~~~~~~~VVV~fya-----~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~-------~~~~~i~~lPTlli 176 (252)
.+.+.|... .|+| |+. +||+.|+.+.+.|..+ ++.|..++.+.- ...++...+|+ |
T Consensus 7 ~~~~~i~~~----~vvv-y~~g~~~~~~Cp~C~~ak~~L~~~-----~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~--i 74 (109)
T 1wik_A 7 GLKVLTNKA----SVML-FMKGNKQEAKCGFSKQILEILNST-----GVEYETFDILEDEEVRQGLKTFSNWPTYPQ--L 74 (109)
T ss_dssp CHHHHHTTS----SEEE-EESSTTTCCCSSTHHHHHHHHHHT-----CSCEEEEESSSCHHHHHHHHHHHSCCSSCE--E
T ss_pred HHHHHhccC----CEEE-EEecCCCCCCCchHHHHHHHHHHc-----CCCeEEEECCCCHHHHHHHHHHhCCCCCCE--E
Confidence 345555433 3555 556 9999999999999775 477888877532 23456788998 4
Q ss_pred EECCeEEE
Q 025454 177 YNNGAVKA 184 (252)
Q Consensus 177 y~~G~~v~ 184 (252)
|.+|+.++
T Consensus 75 fi~g~~ig 82 (109)
T 1wik_A 75 YVRGDLVG 82 (109)
T ss_dssp ECSSSEEE
T ss_pred EECCEEEc
Confidence 67998654
No 265
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.37 E-value=0.00027 Score=60.75 Aligned_cols=100 Identities=10% Similarity=0.216 Sum_probs=67.9
Q ss_pred ceEEcCh-hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHC-CCceEEEEeccCCCCCCCCCcccEEEEEE
Q 025454 101 SVMPISG-SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKY-PATKFVKIISTDCIPNYPDRNLPTVLVYN 178 (252)
Q Consensus 101 ~v~eIs~-~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky-~~vkFvkI~~~~~~~~~~i~~lPTlliy~ 178 (252)
.|.+|+. +++...+... ..+||-|+++| |....+.|.++|..+ ..++|+.+....+...|++.. |++++|+
T Consensus 7 ~v~~l~s~~~~~~~l~~~---~v~vvgff~~~---~~~~~~~f~~~A~~lr~~~~F~~~~~~~v~~~~~~~~-p~i~~fk 79 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFISDK---DASIVGFFDDS---FSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDNG-EGIILFR 79 (252)
T ss_dssp CEEECCSHHHHHHHHTSS---SCEEEEEESCT---TSHHHHHHHHHHHHTTTTSCEEEECCHHHHHHHCSSS-EEEEEEC
T ss_pred CceeecCHHHHHHHhhcC---CeEEEEEECCC---CChHHHHHHHHHHhcccCcEEEEEChHHHHHHhCCCC-CcEEEEc
Confidence 4788854 4444445433 35777788887 556678899999999 669999887666778899986 9999999
Q ss_pred CCeEEEEe-eccccc--CCCCCHHHHHHHHHhc
Q 025454 179 NGAVKANY-VGLRSF--GRRCTPEGVALVLCQS 208 (252)
Q Consensus 179 ~G~~v~~~-vG~~~~--G~~~~~e~lE~~L~~~ 208 (252)
.+.....+ -+...+ | .++.+.|..|+..+
T Consensus 80 ~~~~~~kf~e~~~~y~~g-~~~~~~l~~fi~~~ 111 (252)
T 2h8l_A 80 PSHLTNKFEDKTVAYTEQ-KMTSGKIKKFIQEN 111 (252)
T ss_dssp CGGGCCTTSCSEEECCCS-SCCHHHHHHHHHHH
T ss_pred chhhcccccccccccCCC-CcCHHHHHHHHHhc
Confidence 65321110 011112 3 35888898888763
No 266
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.31 E-value=0.00089 Score=56.92 Aligned_cols=82 Identities=15% Similarity=0.159 Sum_probs=56.5
Q ss_pred eE-EEEEEcCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC--------------------C--------------CC
Q 025454 122 WV-VVILYKDGFAECGLLMQCLEELARKYP--ATKFVKIISTD--------------------C--------------IP 164 (252)
Q Consensus 122 ~V-VV~fya~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~--------------------~--------------~~ 164 (252)
+| |+.|+++||+.|....+.|.+++.+|. +++++-|..+. . ..
T Consensus 33 ~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~ 112 (224)
T 1prx_A 33 WGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAI 112 (224)
T ss_dssp EEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHH
T ss_pred eEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHH
Confidence 54 445679999999999999999999885 47777774321 1 12
Q ss_pred CCCCC------------cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHH
Q 025454 165 NYPDR------------NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVL 205 (252)
Q Consensus 165 ~~~i~------------~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L 205 (252)
.|++. .+|+++|+ .+|+++..++|....|. +.++|...|
T Consensus 113 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr--~~~eil~~i 164 (224)
T 1prx_A 113 LLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGR--NFDEILRVV 164 (224)
T ss_dssp HTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCC--CHHHHHHHH
T ss_pred HhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCC--CHHHHHHHH
Confidence 45552 47988887 57999999887654443 345555444
No 267
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=97.31 E-value=7.3e-05 Score=59.28 Aligned_cols=83 Identities=6% Similarity=0.040 Sum_probs=52.4
Q ss_pred eEEEEEEc----CCCchhhhHHHHHHHHHHHCCCceEEEEeccCC-------CCCCCCCcccEEEEEECCeEEEEeeccc
Q 025454 122 WVVVILYK----DGFAECGLLMQCLEELARKYPATKFVKIISTDC-------IPNYPDRNLPTVLVYNNGAVKANYVGLR 190 (252)
Q Consensus 122 ~VVV~fya----~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~-------~~~~~i~~lPTlliy~~G~~v~~~vG~~ 190 (252)
.|+|+.++ +||+.|+.+...|..+ ++.|..++...- ....+...+|.| |.+|+.++.+--+.
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-----gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~V--fI~G~~iGG~d~l~ 108 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAAC-----GERFAYVDILQNPDIRAELPKYANWPTFPQL--WVDGELVGGCDIVI 108 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHTT-----CSCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EETTEEEESHHHHH
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHHc-----CCceEEEECCCCHHHHHHHHHHHCCCCcCEE--EECCEEEEChHHHH
Confidence 36665554 8999999999988765 466777776421 133467789975 67998764322111
Q ss_pred ccCCCCCHHHHHHHHHhcCCCCCC
Q 025454 191 SFGRRCTPEGVALVLCQSDPVLND 214 (252)
Q Consensus 191 ~~G~~~~~e~lE~~L~~~g~i~~~ 214 (252)
.+ .....|..+|...|+...+
T Consensus 109 ~l---~~~G~L~~~L~~~g~~~~~ 129 (135)
T 2wci_A 109 EM---YQRGELQQLIKETAAKYKS 129 (135)
T ss_dssp HH---HHHTHHHHHHHHHHHHHCC
T ss_pred HH---HHCChHHHHHHHcCCCCcc
Confidence 11 1223577788777766553
No 268
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.31 E-value=7.9e-05 Score=61.50 Aligned_cols=39 Identities=15% Similarity=0.169 Sum_probs=35.5
Q ss_pred ceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc
Q 025454 121 VWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST 160 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~ 160 (252)
+++||.|+..|||+|+.+.|.+.++.++| +++|.++...
T Consensus 23 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~v~~~~~p~~ 61 (185)
T 3feu_A 23 MAPVTEVFALSCGHCRNMENFLPVISQEA-GTDIGKMHIT 61 (185)
T ss_dssp CCSEEEEECTTCHHHHHHGGGHHHHHHHH-TSCCEEEECC
T ss_pred CCEEEEEECCCChhHHHhhHHHHHHHHHh-CCeEEEEecc
Confidence 58999999999999999999999999999 8888888753
No 269
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.26 E-value=0.00026 Score=60.93 Aligned_cols=101 Identities=8% Similarity=0.025 Sum_probs=71.3
Q ss_pred ceEEc-ChhhHHHHHHc-CCCCceEEEEEEcCCCchhhhHHHHHHHHHHHC-CCceEEEEeccCCCCCCCCCcccEEEEE
Q 025454 101 SVMPI-SGSDFVREVSQ-APPDVWVVVILYKDGFAECGLLMQCLEELARKY-PATKFVKIISTDCIPNYPDRNLPTVLVY 177 (252)
Q Consensus 101 ~v~eI-s~~~f~~~V~~-~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky-~~vkFvkI~~~~~~~~~~i~~lPTlliy 177 (252)
.|.+| +.+++...+.. . ..+||-|++++ |....+.|.++|..+ ..++|+.+...+....|++.. |+|++|
T Consensus 7 ~v~~l~s~~~~~~~~~~~~---~v~vVgff~~~---~~~~~~~F~~~A~~lr~~~~F~~t~~~~v~~~~~v~~-p~ivlf 79 (250)
T 3ec3_A 7 PSKEILTLKQVQEFLKDGD---DVVILGVFQGV---GDPGYLQYQDAANTLREDYKFHHTFSTEIAKFLKVSL-GKLVLM 79 (250)
T ss_dssp SSEECCCHHHHHHHHHHCS---SCEEEEECSCT---TCHHHHHHHHHHHHHTTTCCEEEECCHHHHHHHTCCS-SEEEEE
T ss_pred CceecCCHHHHHHHHhcCC---CeEEEEEEcCC---CchHHHHHHHHHHhhhcCcEEEEECcHHHHHHcCCCC-CeEEEE
Confidence 47788 45777766665 4 36788888887 567888999999987 679999987666677888887 999999
Q ss_pred ECCeEEEEe-eccccc-C-CCCCHHHHHHHHHhc
Q 025454 178 NNGAVKANY-VGLRSF-G-RRCTPEGVALVLCQS 208 (252)
Q Consensus 178 ~~G~~v~~~-vG~~~~-G-~~~~~e~lE~~L~~~ 208 (252)
+.+.....+ -+...+ | ..++.+.|..|+..+
T Consensus 80 k~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~ 113 (250)
T 3ec3_A 80 QPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKH 113 (250)
T ss_dssp CCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHH
T ss_pred ecchhhccccccceeccCCCCCCHHHHHHHHHHc
Confidence 964221111 011122 3 357888999998864
No 270
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.24 E-value=0.0007 Score=58.11 Aligned_cols=83 Identities=10% Similarity=0.023 Sum_probs=55.1
Q ss_pred CceEEEEEEcCC-Cchhh-----hHHHHHHHHHHHCCCceEEEEeccC------------C--------------CCCCC
Q 025454 120 DVWVVVILYKDG-FAECG-----LLMQCLEELARKYPATKFVKIISTD------------C--------------IPNYP 167 (252)
Q Consensus 120 ~~~VVV~fya~w-c~~Ck-----~l~~~l~~LA~ky~~vkFvkI~~~~------------~--------------~~~~~ 167 (252)
|++|||.||..| |+.|. .-.+.|.++ |.++.++-|..+. + ...|+
T Consensus 48 Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~vak~yG 124 (224)
T 3keb_A 48 HTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WPHLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFHKRYG 124 (224)
T ss_dssp TCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CTTSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHHHHTT
T ss_pred CCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cCCCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHHHHhC
Confidence 468999999888 99999 666666665 6778888774321 1 13466
Q ss_pred CCc---------ccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 168 DRN---------LPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 168 i~~---------lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
+.. .|+.+|+ .+|.++...+.... +.....+++...|.
T Consensus 125 v~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~-~~~pd~~evl~~L~ 172 (224)
T 3keb_A 125 VLITEYPLSGYTSPAIILADAANVVHYSERLANT-RDFFDFDAIEKLLQ 172 (224)
T ss_dssp CBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBT-TCCCCHHHHHHHHH
T ss_pred CccccccccCCccCEEEEEcCCCEEEEEEecCCC-CCCCCHHHHHHHHH
Confidence 653 6888777 48999987765432 22344556555554
No 271
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.18 E-value=0.0017 Score=53.70 Aligned_cols=94 Identities=12% Similarity=0.019 Sum_probs=63.8
Q ss_pred ChhhHHHHHHcC-----CCCceEEEEEEcCCCchhhhHHHH------HHHHHHHCCCceEEEEeccCC------------
Q 025454 106 SGSDFVREVSQA-----PPDVWVVVILYKDGFAECGLLMQC------LEELARKYPATKFVKIISTDC------------ 162 (252)
Q Consensus 106 s~~~f~~~V~~~-----~~~~~VVV~fya~wc~~Ck~l~~~------l~~LA~ky~~vkFvkI~~~~~------------ 162 (252)
-...|.+++..+ ..+++++|+|+++||..|..+... +.++-.. +.-|...+.+.-
T Consensus 36 ~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~--nfV~w~~dv~~~e~~~~~~~~~~~ 113 (178)
T 2ec4_A 36 FIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ--NFITWAWDLTKDSNRARFLTMCNR 113 (178)
T ss_dssp CCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH--TEEEEEEECCSHHHHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc--CEEEEEEeCCCchhhhhhhhhhhh
Confidence 467788888776 346899999999999999998732 2233332 344555565421
Q ss_pred ---------CCCCCCCcccEEEEEEC----CeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 163 ---------IPNYPDRNLPTVLVYNN----GAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 163 ---------~~~~~i~~lPTlliy~~----G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
+.+|++.++|+++++.. ++++.++.|. .++++|-..|..
T Consensus 114 ~~g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~------~~~~~ll~~L~~ 165 (178)
T 2ec4_A 114 HFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGN------TTVDELMMRLMA 165 (178)
T ss_dssp HTCHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSC------CCHHHHHHHHHH
T ss_pred hhHHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCC------CCHHHHHHHHHH
Confidence 13489999999999842 3667888875 356666665543
No 272
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.08 E-value=0.0028 Score=57.68 Aligned_cols=117 Identities=9% Similarity=0.063 Sum_probs=79.7
Q ss_pred CCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCc-hhhhHHHHHHHHHHHCCC-ceEEEEeccCC---CCCCCCC--c
Q 025454 98 RFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFA-ECGLLMQCLEELARKYPA-TKFVKIISTDC---IPNYPDR--N 170 (252)
Q Consensus 98 ~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~-~Ck~l~~~l~~LA~ky~~-vkFvkI~~~~~---~~~~~i~--~ 170 (252)
.+..|.+++.+++..... . +.+++|.|+.++|. .|+.+...+.+++.++.+ +.|+.|++... ...|++. .
T Consensus 217 ~~p~v~elt~~~~~~~~~-~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~~~~~~~~gl~~~~ 293 (382)
T 2r2j_A 217 CVPLVREITFENGEELTE-E--GLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKFRHPLLHIQKTPAD 293 (382)
T ss_dssp HSCSSEECCHHHHHHHHT-T--CCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTTHHHHHHTTCCGGG
T ss_pred ccCceEecChhhHHHHhc-C--CCcEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHhHHHHHHcCCCccC
Confidence 367889999999877553 2 35788999999874 466666777777777764 99999998754 3577776 6
Q ss_pred ccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh--cCCCCCCCCCCCCc
Q 025454 171 LPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ--SDPVLNDGQSGSDP 221 (252)
Q Consensus 171 lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~--~g~i~~~~~~~~~~ 221 (252)
+|+|.++..+.. .. +..+...++.+.|+.|+.. .|-+...++++...
T Consensus 294 ~P~i~i~~~~~~-y~---~~~~~~~~~~~~i~~F~~d~~~Gkl~p~~kse~~P 342 (382)
T 2r2j_A 294 CPVIAIDSFRHM-YV---FGDFKDVLIPGKLKQFVFDLHSGKLHREFHHGPDP 342 (382)
T ss_dssp CSEEEEECSSCE-EE---CCCSGGGGSTTHHHHHHHHHHHTTTSSCC------
T ss_pred CCEEEEEcchhc-CC---CCccccccCHHHHHHHHHHHHCCCccccccCCCCC
Confidence 999988765543 11 2222223567889999986 78888887775543
No 273
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.00016 Score=56.03 Aligned_cols=86 Identities=13% Similarity=0.057 Sum_probs=53.6
Q ss_pred eEEEEEEc----CCCchhhhHHHHHHHHHHHCCCceEEEEeccCC-------CCCCCCCcccEEEEEECCeEEEEeeccc
Q 025454 122 WVVVILYK----DGFAECGLLMQCLEELARKYPATKFVKIISTDC-------IPNYPDRNLPTVLVYNNGAVKANYVGLR 190 (252)
Q Consensus 122 ~VVV~fya----~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~-------~~~~~i~~lPTlliy~~G~~v~~~vG~~ 190 (252)
.|+|+-.. |||+.|+.....|..+.-.|. .|..++...- ....+...+|.+ |.+|+.++.+--+.
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~--~~~~~dv~~~~~~~~~l~~~sg~~tvP~v--fI~g~~iGG~d~l~ 92 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPA--KFAAYNVLEDPELREGIKEFSEWPTIPQL--YVNKEFIGGCDVIT 92 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGG--GEEEEECTTCHHHHHHHHHHHTCCSSCEE--EETTEEEESHHHHH
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHHcCCCcc--eEEEEEecCCHHHHHHHHHHhCCCCCCeE--EECCEEEecHHHHH
Confidence 45555544 599999999999988643222 2656655321 123466789987 56998765332222
Q ss_pred ccCCCCCHHHHHHHHHhcCCCCCC
Q 025454 191 SFGRRCTPEGVALVLCQSDPVLND 214 (252)
Q Consensus 191 ~~G~~~~~e~lE~~L~~~g~i~~~ 214 (252)
.+ .....|..+|...|++...
T Consensus 93 ~l---~~~G~L~~~L~~~g~~~~~ 113 (121)
T 3gx8_A 93 SM---ARSGELADLLEEAQALVPE 113 (121)
T ss_dssp HH---HHHTHHHHHHHHTTCBCC-
T ss_pred HH---HHcCChHHHHHHcCCCCCc
Confidence 21 1234788899999987764
No 274
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.07 E-value=0.00023 Score=55.71 Aligned_cols=97 Identities=11% Similarity=0.048 Sum_probs=54.9
Q ss_pred hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC--------CCCCCCCCcccEEEEEEC
Q 025454 108 SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD--------CIPNYPDRNLPTVLVYNN 179 (252)
Q Consensus 108 ~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~--------~~~~~~i~~lPTlliy~~ 179 (252)
++|.+.+... . |+.|+.+|||.|+.+...|.+....-+...++.|+... +....+...+|++ |.+
T Consensus 5 ~~~~~ii~~~----~-Vvvysk~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~I--fI~ 77 (127)
T 3l4n_A 5 KEYSLILDLS----P-IIIFSKSTCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNL--LVN 77 (127)
T ss_dssp HHHHHHHTSC----S-EEEEECTTCHHHHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EET
T ss_pred HHHHHHHccC----C-EEEEEcCCCccHHHHHHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceE--EEC
Confidence 4566655433 2 67788999999999998888741111233444444321 1123477899998 558
Q ss_pred CeEEEEeecccccCCCCCHHHHHHHHHhcCCCCCC
Q 025454 180 GAVKANYVGLRSFGRRCTPEGVALVLCQSDPVLND 214 (252)
Q Consensus 180 G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g~i~~~ 214 (252)
|+.++ |+.++-.--....|..+|...|.=...
T Consensus 78 G~~IG---G~ddl~~l~~~G~L~~lL~~~g~~~~~ 109 (127)
T 3l4n_A 78 GVSRG---GNEEIKKLHTQGKLLESLQVWSDGKFS 109 (127)
T ss_dssp TEECC---CHHHHHHHHHTTCHHHHHHHTCTTSCE
T ss_pred CEEEc---CHHHHHHHHHCCCHHHHHHHhcCCcEE
Confidence 98765 333220000112466677776654333
No 275
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.06 E-value=0.0049 Score=48.99 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=79.4
Q ss_pred hhhcCCCceEEcChhhHHHHHHcCCCCceEEEEEEc-CCCchhhhHHHHHHHHHHHCCC-ceEEEEec--cCC---CCCC
Q 025454 94 TKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYK-DGFAECGLLMQCLEELARKYPA-TKFVKIIS--TDC---IPNY 166 (252)
Q Consensus 94 ~~~~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya-~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~--~~~---~~~~ 166 (252)
++...++-|.++|.+++.... +.+ .++++.++. ..-..-..+.+.+..+|++|.+ +.|+.++. ... ...|
T Consensus 8 ~~~~~~PLV~e~t~en~~~~~-~~~--~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~f 84 (147)
T 3bj5_A 8 MKHNQLPLVIEFTEQTAPKIF-GGE--IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFF 84 (147)
T ss_dssp -------CEEECCTTTHHHHH-SSS--CCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHT
T ss_pred hhhccCCeeEEeccccHHHHh-cCC--CceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHc
Confidence 355677889999999986664 332 444444343 3344466788999999999986 99999998 432 3678
Q ss_pred CCCc--ccEEEEEEC-CeEEEEeecccccCCCCCHHHHHHHHHh--cCCCCCCCCCCCC
Q 025454 167 PDRN--LPTVLVYNN-GAVKANYVGLRSFGRRCTPEGVALVLCQ--SDPVLNDGQSGSD 220 (252)
Q Consensus 167 ~i~~--lPTlliy~~-G~~v~~~vG~~~~G~~~~~e~lE~~L~~--~g~i~~~~~~~~~ 220 (252)
+++. +|++.|+.. +.... +. +. ...++.+.|..|+.. .|-+..-++|+.-
T Consensus 85 Gl~~~~~P~v~i~~~~~~~~K-y~-~~--~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpi 139 (147)
T 3bj5_A 85 GLKKEECPAVRLITLEEEMTK-YK-PE--SEELTAERITEFCHRFLEGKIKPHLMSQEL 139 (147)
T ss_dssp TCCGGGCSEEEEEECSSSCEE-EC-CS--CCCCCHHHHHHHHHHHHTTCSCEEECCSCC
T ss_pred CCCcccCCEEEEEeccccccc-CC-CC--cccCCHHHHHHHHHHHHcCCccccccCCCC
Confidence 8885 999999875 33222 21 11 246789999999986 7888777776543
No 276
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=96.99 E-value=0.001 Score=56.38 Aligned_cols=83 Identities=13% Similarity=0.175 Sum_probs=56.6
Q ss_pred eEEEE-EEcCCCchhhhHHHHHHHHHHHCC--CceEEEEeccC-----------------C--------------CCCCC
Q 025454 122 WVVVI-LYKDGFAECGLLMQCLEELARKYP--ATKFVKIISTD-----------------C--------------IPNYP 167 (252)
Q Consensus 122 ~VVV~-fya~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~~~-----------------~--------------~~~~~ 167 (252)
+||+. |+++||+.|..-.+.|.++..+|. +++++-|..+. . ...|+
T Consensus 33 ~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~yg 112 (220)
T 1xcc_A 33 WAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLK 112 (220)
T ss_dssp EEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHT
T ss_pred eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhC
Confidence 55555 579999999999999999998885 47877774321 0 02355
Q ss_pred CC------------cccEEEEE-ECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 168 DR------------NLPTVLVY-NNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 168 i~------------~lPTlliy-~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
+. .+|+++|+ .+|+++..+++....|. +.++|...|.
T Consensus 113 v~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~--~~~ell~~i~ 162 (220)
T 1xcc_A 113 IMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGR--NAHEILRVLK 162 (220)
T ss_dssp CEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCC--CHHHHHHHHH
T ss_pred CCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCC--CHHHHHHHHH
Confidence 42 37888887 57999998887544343 4455555443
No 277
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.91 E-value=0.00087 Score=54.72 Aligned_cols=41 Identities=12% Similarity=0.095 Sum_probs=35.1
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEec
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIIS 159 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~ 159 (252)
.++++|+.|+.+|||+|+.+.|.|.+|.++|+. +.|..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEecc
Confidence 356889999999999999999999999999985 66766653
No 278
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=96.72 E-value=0.0012 Score=50.88 Aligned_cols=83 Identities=17% Similarity=0.025 Sum_probs=51.3
Q ss_pred eEEEEEEc----CCCchhhhHHHHHHHHHHHCCCce-EEEEeccCC-------CCCCCCCcccEEEEEECCeEEEEeecc
Q 025454 122 WVVVILYK----DGFAECGLLMQCLEELARKYPATK-FVKIISTDC-------IPNYPDRNLPTVLVYNNGAVKANYVGL 189 (252)
Q Consensus 122 ~VVV~fya----~wc~~Ck~l~~~l~~LA~ky~~vk-FvkI~~~~~-------~~~~~i~~lPTlliy~~G~~v~~~vG~ 189 (252)
.|+|+-.. |||+.|+.....|..+. +. |..++...- ....+...+|++ |.+|+.++.+--+
T Consensus 21 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~g-----v~~~~~vdV~~d~~~~~~l~~~tg~~tvP~v--fI~g~~IGG~d~l 93 (118)
T 2wem_A 21 KVVVFLKGTPEQPQCGFSNAVVQILRLHG-----VRDYAAYNVLDDPELRQGIKDYSNWPTIPQV--YLNGEFVGGCDIL 93 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHHTT-----CCCCEEEESSSCHHHHHHHHHHHTCCSSCEE--EETTEEEESHHHH
T ss_pred CEEEEEecCCCCCccHHHHHHHHHHHHcC-----CCCCEEEEcCCCHHHHHHHHHHhCCCCcCeE--EECCEEEeChHHH
Confidence 35554433 59999999999988753 42 555554321 122366789997 6699877533222
Q ss_pred cccCCCCCHHHHHHHHHhcCCCCCC
Q 025454 190 RSFGRRCTPEGVALVLCQSDPVLND 214 (252)
Q Consensus 190 ~~~G~~~~~e~lE~~L~~~g~i~~~ 214 (252)
..+ .....|..+|.+.|+....
T Consensus 94 ~~l---~~~G~L~~~L~~~g~~~~~ 115 (118)
T 2wem_A 94 LQM---HQNGDLVEELKKLGIHSAL 115 (118)
T ss_dssp HHH---HHHSHHHHHHHHTTCCCTT
T ss_pred HHH---HHCCCHHHHHHHcCChhhh
Confidence 221 1234688889998876554
No 279
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.66 E-value=0.0024 Score=51.87 Aligned_cols=41 Identities=12% Similarity=0.192 Sum_probs=34.6
Q ss_pred CCceEEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEec
Q 025454 119 PDVWVVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIIS 159 (252)
Q Consensus 119 ~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~ 159 (252)
.++.+|+.|+..|||+|..+.+.+.++.++|+. +.|..+..
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 345789999999999999999999999999985 77766543
No 280
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=96.66 E-value=0.0013 Score=54.44 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=35.2
Q ss_pred ceEEEEEEcCCCchhhhHHHHH---HHHHHHCCC-ceEEEEecc
Q 025454 121 VWVVVILYKDGFAECGLLMQCL---EELARKYPA-TKFVKIIST 160 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l---~~LA~ky~~-vkFvkI~~~ 160 (252)
+++||.|+..|||+|+.+.|.+ .+|.++|++ ++|+.+...
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~ 65 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVE 65 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECS
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecc
Confidence 5789999999999999999987 699999994 899888654
No 281
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.52 E-value=0.001 Score=50.23 Aligned_cols=66 Identities=15% Similarity=0.157 Sum_probs=41.8
Q ss_pred hHHHHHHcCCCCceEEEEEEc----CCCchhhhHHHHHHHHHHHCCCceEEEEeccCC-------CCCCCCCcccEEEEE
Q 025454 109 DFVREVSQAPPDVWVVVILYK----DGFAECGLLMQCLEELARKYPATKFVKIISTDC-------IPNYPDRNLPTVLVY 177 (252)
Q Consensus 109 ~f~~~V~~~~~~~~VVV~fya----~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~-------~~~~~i~~lPTlliy 177 (252)
++++.+.+.. .|+|+-.. |||+.|+.....|..+ ++.|..++.... ....+...+|++ |
T Consensus 9 ~~v~~~i~~~---~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~-----gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~i--f 78 (109)
T 3ipz_A 9 DTLEKLVNSE---KVVLFMKGTRDFPMCGFSNTVVQILKNL-----NVPFEDVNILENEMLRQGLKEYSNWPTFPQL--Y 78 (109)
T ss_dssp HHHHHHHTSS---SEEEEESBCSSSBSSHHHHHHHHHHHHT-----TCCCEEEEGGGCHHHHHHHHHHHTCSSSCEE--E
T ss_pred HHHHHHHccC---CEEEEEecCCCCCCChhHHHHHHHHHHc-----CCCcEEEECCCCHHHHHHHHHHHCCCCCCeE--E
Confidence 3444444443 46654433 5999999999998875 355666665321 123467889965 6
Q ss_pred ECCeEEE
Q 025454 178 NNGAVKA 184 (252)
Q Consensus 178 ~~G~~v~ 184 (252)
.+|+.++
T Consensus 79 i~g~~iG 85 (109)
T 3ipz_A 79 IGGEFFG 85 (109)
T ss_dssp ETTEEEE
T ss_pred ECCEEEe
Confidence 6998765
No 282
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.52 E-value=0.0034 Score=50.28 Aligned_cols=40 Identities=10% Similarity=0.030 Sum_probs=34.1
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHHC--CC-ceEEEEec
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARKY--PA-TKFVKIIS 159 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky--~~-vkFvkI~~ 159 (252)
+..+|+.|+..+||+|+.+.+.+..+.++| ++ ++|+....
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 457899999999999999999999999888 54 88877654
No 283
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.17 Score=44.40 Aligned_cols=102 Identities=11% Similarity=0.082 Sum_probs=66.6
Q ss_pred ceEEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEEeccCCCC-----CCC-----C
Q 025454 101 SVMPI-SGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKIISTDCIP-----NYP-----D 168 (252)
Q Consensus 101 ~v~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI~~~~~~~-----~~~-----i 168 (252)
.+..| +.+++...+... +.++||.|. .. ....+.|..+|..|. .+.|+.+...+... +|+ |
T Consensus 144 ~v~~i~~~~~l~~~l~~~--~~~~vi~fs-~~----~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i 216 (298)
T 3ed3_A 144 YVKKFVRIDTLGSLLRKS--PKLSVVLFS-KQ----DKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEI 216 (298)
T ss_dssp CEEECSCGGGHHHHHTSC--SSEEEEEEE-SS----SSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHH
T ss_pred ccEEcCCHHHHHHHHhcC--CceEEEEEc-CC----CcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcch
Confidence 47777 567777777654 256677663 22 234578999999995 59999998765543 333 2
Q ss_pred -------------CcccEEEEEECC-eEEEEeecccccCCCCCHHHHHHHHHh-cCCCCCC
Q 025454 169 -------------RNLPTVLVYNNG-AVKANYVGLRSFGRRCTPEGVALVLCQ-SDPVLND 214 (252)
Q Consensus 169 -------------~~lPTlliy~~G-~~v~~~vG~~~~G~~~~~e~lE~~L~~-~g~i~~~ 214 (252)
...|+|++|+.. .....+. |..++.+.|..||.+ ...++..
T Consensus 217 ~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~-----g~~~~~~~i~~fi~~~~~~~p~~ 272 (298)
T 3ed3_A 217 FKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYE-----GNSINKNDISKFLRDTFSITPNE 272 (298)
T ss_dssp HHHHHHHHHHHTTCSSCEEEEEETTTTEEEECC-----CSSCCHHHHHHHHHHHHTCCCSS
T ss_pred hhhhhcccccccccCCCeEEEEcCCCCceEEec-----cccCCHHHHHHHHHhhcCCCCCc
Confidence 679999999862 2222232 346789999999873 4433333
No 284
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=96.08 E-value=0.019 Score=47.30 Aligned_cols=97 Identities=22% Similarity=0.135 Sum_probs=58.8
Q ss_pred ceEEcChhhHHHHHHcCCCCceEEE-EEEcCCCchhhh-HHHHHHHHHHHCC--Cc-eEEEEeccC------------C-
Q 025454 101 SVMPISGSDFVREVSQAPPDVWVVV-ILYKDGFAECGL-LMQCLEELARKYP--AT-KFVKIISTD------------C- 162 (252)
Q Consensus 101 ~v~eIs~~~f~~~V~~~~~~~~VVV-~fya~wc~~Ck~-l~~~l~~LA~ky~--~v-kFvkI~~~~------------~- 162 (252)
....++-.+|.. +++||+ .|++.||+.|.. -.+.|.+++.+|. ++ .++-|..+. +
T Consensus 35 ~~~~vsLsd~~~-------Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~ 107 (176)
T 4f82_A 35 GPNACSVRDQVA-------GKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTA 107 (176)
T ss_dssp EEEEEEHHHHHT-------TCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCT
T ss_pred CceEEeHHHHhC-------CCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCC
Confidence 455555555431 245554 566999999999 8889999888874 46 777664321 1
Q ss_pred -------------CCCCCC-----------CcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 163 -------------IPNYPD-----------RNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 163 -------------~~~~~i-----------~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
.+.|++ +..|+.+|..+|.++...++.. | .++....+.+|.+
T Consensus 108 ~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~~~--~-~~~~~~a~~vL~~ 173 (176)
T 4f82_A 108 GKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVEAP--G-KFEVSDAASVLAT 173 (176)
T ss_dssp TTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEEETTEEEEEEECCT--T-CCSSSSHHHHHHT
T ss_pred CCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEEcCCEEEEEEEcCC--C-CcchhhHHHHHHH
Confidence 123333 1246444449999998888642 2 2333455556553
No 285
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.05 E-value=0.02 Score=48.30 Aligned_cols=70 Identities=17% Similarity=0.182 Sum_probs=45.2
Q ss_pred hhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC------CCCCCCCCcccEEEEEECCe
Q 025454 108 SDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD------CIPNYPDRNLPTVLVYNNGA 181 (252)
Q Consensus 108 ~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~------~~~~~~i~~lPTlliy~~G~ 181 (252)
++.++.+....-....|+.|+.+||+.|+.....|... ++.|-.++.+. +...++...+|+|+ .+|+
T Consensus 156 ~~il~~l~~~~i~~~~i~ly~~~~Cp~C~~a~~~L~~~-----~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~--~~g~ 228 (241)
T 1nm3_A 156 DTMLKYLAPQHQVQESISIFTKPGCPFCAKAKQLLHDK-----GLSFEEIILGHDATIVSVRAVSGRTTVPQVF--IGGK 228 (241)
T ss_dssp HHHHHHHCTTSCCCCCEEEEECSSCHHHHHHHHHHHHH-----TCCCEEEETTTTCCHHHHHHHTCCSSSCEEE--ETTE
T ss_pred HHHHHHhhhhccccceEEEEECCCChHHHHHHHHHHHc-----CCceEEEECCCchHHHHHHHHhCCCCcCEEE--ECCE
Confidence 44455554321112346678899999999999988875 34555555532 23457889999975 5887
Q ss_pred EEE
Q 025454 182 VKA 184 (252)
Q Consensus 182 ~v~ 184 (252)
.+.
T Consensus 229 ~i~ 231 (241)
T 1nm3_A 229 HIG 231 (241)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 286
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=95.64 E-value=0.14 Score=43.46 Aligned_cols=116 Identities=10% Similarity=0.062 Sum_probs=75.1
Q ss_pred hhcCCCceEEcChhhHHHHHHcCCCCceEEEEEEcC-CC----chhhhHHHHHHHHHHHCCCceEEEEeccCC---CCCC
Q 025454 95 KISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKD-GF----AECGLLMQCLEELARKYPATKFVKIISTDC---IPNY 166 (252)
Q Consensus 95 ~~~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~-wc----~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~---~~~~ 166 (252)
....+..|.+++.+++.... . + .++++.|+.. .+ ..+..+...+..+|++|..+.|+.+++.+. .+.|
T Consensus 111 ~~~~~Plv~e~t~~n~~~~~-~-~--~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~kki~F~~~d~~~~~~~l~~f 186 (250)
T 3ec3_A 111 VKHALPLVGHRKTSNDAKRY-S-K--RPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFPEYTFAIADEEDYATEVKDL 186 (250)
T ss_dssp HHHSSCTEEEECTTTHHHHS-C-S--SSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHT
T ss_pred HHcCCCceeecCccchhhhh-c-c--CccEEEEEecccccccchhHHHHHHHHHHHHHhhcceeEEEEcHHHHHHHHHHc
Confidence 33467889999999887655 2 2 3556656643 22 234557888999999999999999998753 3566
Q ss_pred CCC--ccc-EEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh--cCCCCCCCCCCC
Q 025454 167 PDR--NLP-TVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ--SDPVLNDGQSGS 219 (252)
Q Consensus 167 ~i~--~lP-Tlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~--~g~i~~~~~~~~ 219 (252)
++. ++| .++++...... + .+. ...++.+.|..|+.. .|-+...++++.
T Consensus 187 gl~~~~~~p~~~~~~~~~~k--y-~~~--~~~~t~~~i~~Fv~~~~~Gkl~p~~kSep 239 (250)
T 3ec3_A 187 GLSESGGDVNAAILDESGKK--F-AME--PEEFDSDALREFVMAFKKGKLKPVIKSQP 239 (250)
T ss_dssp TCSSCSCSCEEEEECTTSCE--E-ECC--CCSCCHHHHHHHHHHHHTTCCCCCC----
T ss_pred CCCccCCCcEEEEEcCCCce--e-cCC--cccCCHHHHHHHHHHHHCCCccceeecCC
Confidence 775 344 66665432211 1 111 246899999999985 788888777654
No 287
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=95.60 E-value=0.016 Score=43.71 Aligned_cols=65 Identities=11% Similarity=0.104 Sum_probs=41.8
Q ss_pred hHHHHHHcCCCCceEEEEEEc-----CCCchhhhHHHHHHHHHHHCCCceEEEEeccCC-------CCCCCCCcccEEEE
Q 025454 109 DFVREVSQAPPDVWVVVILYK-----DGFAECGLLMQCLEELARKYPATKFVKIISTDC-------IPNYPDRNLPTVLV 176 (252)
Q Consensus 109 ~f~~~V~~~~~~~~VVV~fya-----~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~-------~~~~~i~~lPTlli 176 (252)
++++.+.+.. +| |.|.. +||+.|+.....|... ++.|..++...- ....+...+|.+
T Consensus 7 ~~v~~~i~~~---~V-vlf~kg~~~~~~Cp~C~~ak~~L~~~-----gi~y~~~di~~d~~~~~~l~~~~g~~tvP~i-- 75 (111)
T 3zyw_A 7 LRLKKLTHAA---PC-MLFMKGTPQEPRCGFSKQMVEILHKH-----NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQL-- 75 (111)
T ss_dssp HHHHHHHTSS---SE-EEEESBCSSSBSSHHHHHHHHHHHHT-----TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--
T ss_pred HHHHHHHhcC---CE-EEEEecCCCCCcchhHHHHHHHHHHc-----CCCeEEEECcCCHHHHHHHHHHHCCCCCCEE--
Confidence 3444444443 34 45667 9999999999888764 355666665421 122366789997
Q ss_pred EECCeEEE
Q 025454 177 YNNGAVKA 184 (252)
Q Consensus 177 y~~G~~v~ 184 (252)
|.+|+.++
T Consensus 76 fi~g~~iG 83 (111)
T 3zyw_A 76 YVSGELIG 83 (111)
T ss_dssp EETTEEEE
T ss_pred EECCEEEe
Confidence 55897665
No 288
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=95.58 E-value=0.047 Score=46.48 Aligned_cols=111 Identities=12% Similarity=0.197 Sum_probs=72.6
Q ss_pred cCCCceEEcChhhHHHHHHcCCCCceEEEEEEcCCCchh----hhHHHHHHHHHHHCCC----ceEEEEeccCC---CCC
Q 025454 97 SRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDGFAEC----GLLMQCLEELARKYPA----TKFVKIISTDC---IPN 165 (252)
Q Consensus 97 ~~fG~v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~C----k~l~~~l~~LA~ky~~----vkFvkI~~~~~---~~~ 165 (252)
..+..|.++|.+++... .+ .+++|+|+...+..+ ..+...+.++|++|.+ +.|+.+++... ...
T Consensus 111 ~~~Plv~e~t~~n~~~~-~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~ 185 (252)
T 2h8l_A 111 NIFGICPHMTEDNKDLI-QG----KDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSD 185 (252)
T ss_dssp HSSCSSCEECTTTHHHH-SS----SSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGG
T ss_pred cccCCeeecccccHhhh-cC----CCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHH
Confidence 44678999999998774 22 246677775433222 2466778889998853 99999998753 367
Q ss_pred CCC----CcccEEEEEEC-CeEEEEeecccccCCCCCHHH--HHHHHHh--cCCCCCCCCCCC
Q 025454 166 YPD----RNLPTVLVYNN-GAVKANYVGLRSFGRRCTPEG--VALVLCQ--SDPVLNDGQSGS 219 (252)
Q Consensus 166 ~~i----~~lPTlliy~~-G~~v~~~vG~~~~G~~~~~e~--lE~~L~~--~g~i~~~~~~~~ 219 (252)
|++ ..+|+++++.. |. .+. +. ..++.+. |..|+.. .|-+...++++.
T Consensus 186 fgl~~~~~~~P~v~i~~~~~~---ky~-~~---~~~t~~~~~i~~F~~~~~~Gkl~~~~kSe~ 241 (252)
T 2h8l_A 186 FGLESTAGEIPVVAIRTAKGE---KFV-MQ---EEFSRDGKALERFLQDYFDGNLKRYLKSEP 241 (252)
T ss_dssp GTCCCCSCSSCEEEEECTTSC---EEE-CC---SCCCTTSHHHHHHHHHHHHTCSCCCC----
T ss_pred cCCCCccCCCCEEEEEeCcCc---Eec-CC---cccCcchHHHHHHHHHHHCCCccccccCCC
Confidence 788 36999999853 32 121 21 2567777 9999986 677777776543
No 289
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=95.43 E-value=0.018 Score=46.46 Aligned_cols=39 Identities=8% Similarity=0.077 Sum_probs=33.5
Q ss_pred ceEEEEEEcCCCchhhhHHHHH-HHHHHHCCC-ceEEEEec
Q 025454 121 VWVVVILYKDGFAECGLLMQCL-EELARKYPA-TKFVKIIS 159 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l-~~LA~ky~~-vkFvkI~~ 159 (252)
.+++|.||..+||.|..+.+.+ ..|+++|+. ++|..+..
T Consensus 18 ~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l 58 (195)
T 3c7m_A 18 DKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHL 58 (195)
T ss_dssp TTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEEC
T ss_pred CcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEec
Confidence 4678889999999999999999 999999986 77776653
No 290
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=95.10 E-value=0.024 Score=40.28 Aligned_cols=54 Identities=15% Similarity=0.129 Sum_probs=35.9
Q ss_pred EEEEEcC----CCchhhhHHHHHHHHHHHCCCceEEEEecc-----C-------CCCCCCCC-----cccEEEEEECCeE
Q 025454 124 VVILYKD----GFAECGLLMQCLEELARKYPATKFVKIIST-----D-------CIPNYPDR-----NLPTVLVYNNGAV 182 (252)
Q Consensus 124 VV~fya~----wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~-----~-------~~~~~~i~-----~lPTlliy~~G~~ 182 (252)
|+.|+.+ ||+.|+.....|..+ ++.|-.++.+ . +...++.. ++|++++ .+|+.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-----gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i-~~g~~ 75 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-----KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA-PDGSH 75 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-----TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC-TTSCE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-----CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE-ECCEE
Confidence 4567889 999999999888774 3455555544 2 12344666 8998654 37876
Q ss_pred E
Q 025454 183 K 183 (252)
Q Consensus 183 v 183 (252)
+
T Consensus 76 i 76 (87)
T 1aba_A 76 I 76 (87)
T ss_dssp E
T ss_pred E
Confidence 4
No 291
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=95.03 E-value=0.042 Score=39.61 Aligned_cols=54 Identities=6% Similarity=-0.028 Sum_probs=36.3
Q ss_pred EEEEEcCCCchh------hhHHHHHHHHHHHCCCceEEEEeccCC-------CCCCC--CCcccEEEEEECCeEEE
Q 025454 124 VVILYKDGFAEC------GLLMQCLEELARKYPATKFVKIISTDC-------IPNYP--DRNLPTVLVYNNGAVKA 184 (252)
Q Consensus 124 VV~fya~wc~~C------k~l~~~l~~LA~ky~~vkFvkI~~~~~-------~~~~~--i~~lPTlliy~~G~~v~ 184 (252)
|+.|+.+||+.| +.+...|... ++.|..++...- ...++ ...+|.+ |.+|+.++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~~-----~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~i--fi~g~~ig 72 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDGK-----RIQYQLVDISQDNALRDEMRTLAGNPKATPPQI--VNGNHYCG 72 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHT-----TCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEE--EETTEEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHHC-----CCceEEEECCCCHHHHHHHHHHhCCCCCCCCEE--EECCEEEe
Confidence 556789999999 6766666542 366777766421 23455 6799987 56888664
No 292
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.95 E-value=0.063 Score=40.28 Aligned_cols=55 Identities=15% Similarity=0.141 Sum_probs=36.9
Q ss_pred EEEEEEcCCCchhh------hHHHHHHHHHHHCCCceEEEEeccC-------CCCCC--------CCCcccEEEEEECCe
Q 025454 123 VVVILYKDGFAECG------LLMQCLEELARKYPATKFVKIISTD-------CIPNY--------PDRNLPTVLVYNNGA 181 (252)
Q Consensus 123 VVV~fya~wc~~Ck------~l~~~l~~LA~ky~~vkFvkI~~~~-------~~~~~--------~i~~lPTlliy~~G~ 181 (252)
.|+.|+.+||+.|+ .+...|..+ ++.|..++... +...+ +...+|.| |.+|+
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~-----gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~v--fi~g~ 81 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEAN-----KIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQI--FNGDR 81 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-----TCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEE--EETTE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHc-----CCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEE--EECCE
Confidence 36677899999999 566666542 36777777642 12233 66789976 56888
Q ss_pred EEE
Q 025454 182 VKA 184 (252)
Q Consensus 182 ~v~ 184 (252)
.++
T Consensus 82 ~iG 84 (111)
T 2ct6_A 82 YCG 84 (111)
T ss_dssp EEE
T ss_pred EEe
Confidence 665
No 293
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=94.67 E-value=0.0045 Score=56.73 Aligned_cols=84 Identities=13% Similarity=0.099 Sum_probs=48.0
Q ss_pred EEEEEcCCCchhhhHHH-HHHHHHHHCCCceEEEEecc--------CCCCCCCCCcccEEEEEECCeEEEEeecccccCC
Q 025454 124 VVILYKDGFAECGLLMQ-CLEELARKYPATKFVKIIST--------DCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGR 194 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~-~l~~LA~ky~~vkFvkI~~~--------~~~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~ 194 (252)
|+.|+.+||+.|+.... .|..+.-.|..+..+.++.. .+....+.+.+|+| |.+|+.++.+--+..+
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~~gV~y~eidVlEld~~~~~~e~~~~L~~~tG~~TVPqV--FI~Gk~IGG~DdL~~L-- 338 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YINGKHIGGNDDLQEL-- 338 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEE--EETTEEEESHHHHHHH--
T ss_pred EEEEEcCCCcchHHHHHHHHHHcCCCcceEEEEEeccccCCHHHHHHHHHHHCCCCcCEE--EECCEEEEChHHHHHh--
Confidence 55578999999999876 56666555555544444321 12234578899986 5689866432111111
Q ss_pred CCCHHHHHHHHHhcCCCC
Q 025454 195 RCTPEGVALVLCQSDPVL 212 (252)
Q Consensus 195 ~~~~e~lE~~L~~~g~i~ 212 (252)
.....|..+|...|++.
T Consensus 339 -~~~GeL~~lL~~~~~~~ 355 (362)
T 2jad_A 339 -RETGELEELLEPILANL 355 (362)
T ss_dssp -HHSSHHHHHHHHHC---
T ss_pred -hhCChHHHHHHhCchhh
Confidence 01135777777766553
No 294
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=94.57 E-value=0.081 Score=46.47 Aligned_cols=74 Identities=18% Similarity=0.231 Sum_probs=50.1
Q ss_pred eEEEEEEcCCCchhhhHHHHHHHHHHHCCCc--eEEEEeccC-------------------CCCCCCCCcc--cEEEEEE
Q 025454 122 WVVVILYKDGFAECGLLMQCLEELARKYPAT--KFVKIISTD-------------------CIPNYPDRNL--PTVLVYN 178 (252)
Q Consensus 122 ~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~v--kFvkI~~~~-------------------~~~~~~i~~l--PTlliy~ 178 (252)
.+|..|..++|+.|......|.+++..+.-+ .|- ++.-+ ....|+.+++ |.++|
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~~vi~l~~~-v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI~I-- 120 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKGDVVGLSYH-VDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAIL-- 120 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHTSSEEEEEE-CSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEEEE--
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccCCeeeEEEE-EEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEEEE--
Confidence 4677788999999999999999998886532 232 11111 2346788888 98666
Q ss_pred CCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 179 NGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 179 ~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
||+. .+.|+ ..+.|+..|.+
T Consensus 121 ng~~--~v~G~-------d~~~l~~~l~~ 140 (270)
T 2axo_A 121 NGRD--HVKGA-------DVRGIYDRLDA 140 (270)
T ss_dssp TTTE--EEETT-------CHHHHHHHHHH
T ss_pred CCEE--eecCC-------CHHHHHHHHHH
Confidence 7763 13343 35778777764
No 295
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=94.36 E-value=0.059 Score=41.47 Aligned_cols=94 Identities=16% Similarity=0.055 Sum_probs=55.1
Q ss_pred hhhHHHHHHcCCCCceEEEEEE----cCCCchhhhHHHHHHHHHHHCCCceEEEEeccC-------CCCCCCCCcccEEE
Q 025454 107 GSDFVREVSQAPPDVWVVVILY----KDGFAECGLLMQCLEELARKYPATKFVKIISTD-------CIPNYPDRNLPTVL 175 (252)
Q Consensus 107 ~~~f~~~V~~~~~~~~VVV~fy----a~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~-------~~~~~~i~~lPTll 175 (252)
.+...+.|.+++ |||+-- .|.|+.|+.....|..+.- ..|..++... +...-+-+.+|-|
T Consensus 10 ~e~i~~~i~~~~----VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv----~~~~~~~v~~~~~~r~~l~~~sg~~TvPqI- 80 (118)
T 2wul_A 10 AEQLDALVKKDK----VVVFLKGTPEQPQCGFSNAVVQILRLHGV----RDYAAYNVLDDPELRQGIKDYSNWPTIPQV- 80 (118)
T ss_dssp HHHHHHHHHHSS----EEEEESBCSSSBSSHHHHHHHHHHHHTTC----CSCEEEETTSCHHHHHHHHHHHTCCSSCEE-
T ss_pred HHHHHHHHhcCC----EEEEEcCCCCCCCCHHHHHHHHHHHHhCC----cCeEeecccCCHHHHHHHHHhccCCCCCeE-
Confidence 445556666553 655442 2679999999888765321 1355565432 1122344578875
Q ss_pred EEECCeEEEEeecccccCCCCCHHHHHHHHHhcCCCCC
Q 025454 176 VYNNGAVKANYVGLRSFGRRCTPEGVALVLCQSDPVLN 213 (252)
Q Consensus 176 iy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g~i~~ 213 (252)
|.+|+.++-.--+..+ .....|..+|.+.|+...
T Consensus 81 -FI~g~~IGG~Ddl~~l---~~~GeL~~lL~~~Gi~~a 114 (118)
T 2wul_A 81 -YLNGEFVGGCDILLQM---HQNGDLVEELKKLGIHSA 114 (118)
T ss_dssp -EETTEEEECHHHHHHH---HHHTHHHHHHHHTTCCCT
T ss_pred -eECCEEECCHHHHHHH---HHCCCHHHHHHHcCCccc
Confidence 7799887643322222 123468889999986544
No 296
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=94.01 E-value=0.039 Score=46.90 Aligned_cols=51 Identities=12% Similarity=0.085 Sum_probs=40.3
Q ss_pred ceEEcChhhHHHHHHcCCCCceEEEEEE-cCCCchhhhHHHHHHHHHHHCC--CceEEEEec
Q 025454 101 SVMPISGSDFVREVSQAPPDVWVVVILY-KDGFAECGLLMQCLEELARKYP--ATKFVKIIS 159 (252)
Q Consensus 101 ~v~eIs~~~f~~~V~~~~~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~--~vkFvkI~~ 159 (252)
...+|+-.+| +|++||+.|| +.||+.|..-.+.|+++..+|. ++.++-|..
T Consensus 41 ~~~~vsLsd~--------~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~ 94 (216)
T 3sbc_A 41 VFDEVSLDKY--------KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFAST 94 (216)
T ss_dssp EEEEECGGGG--------TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEES
T ss_pred CCcEEehHHh--------CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeec
Confidence 3455666665 3479999999 9999999999999999998885 577777743
No 297
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=93.73 E-value=0.1 Score=46.66 Aligned_cols=70 Identities=10% Similarity=0.173 Sum_probs=46.8
Q ss_pred CCceEEEEEE-cCCCchhhhHHHHHHHHHHHCCCceEEEEeccC------------------------CCCCCCCC----
Q 025454 119 PDVWVVVILY-KDGFAECGLLMQCLEELARKYPATKFVKIISTD------------------------CIPNYPDR---- 169 (252)
Q Consensus 119 ~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~------------------------~~~~~~i~---- 169 (252)
+|++|||.|| +.||+.|..-.+.|.+ ..+.++.++-|..+. ....|++.
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~--~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~~ 100 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSR--ENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENGK 100 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHH--SCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCEETTE
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHH--HhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCCCCCc
Confidence 4579999999 6799999876666644 244567777664321 12468873
Q ss_pred cccEE-EEEECCeEEEEeeccc
Q 025454 170 NLPTV-LVYNNGAVKANYVGLR 190 (252)
Q Consensus 170 ~lPTl-liy~~G~~v~~~vG~~ 190 (252)
.+||. +|=++|.++..+.++.
T Consensus 101 ~~r~tfiId~~G~i~~~~~~v~ 122 (322)
T 4eo3_A 101 TVRSTFLIDRWGFVRKEWRRVK 122 (322)
T ss_dssp ECCEEEEECTTSBEEEEEESCC
T ss_pred CccEEEEECCCCEEEEEEeCCC
Confidence 46654 4447899988777653
No 298
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=92.97 E-value=0.17 Score=40.69 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=32.7
Q ss_pred CceEEEEEEcCCCchhhhHHHHH-HHHHHHCC---CceEEEEec
Q 025454 120 DVWVVVILYKDGFAECGLLMQCL-EELARKYP---ATKFVKIIS 159 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l-~~LA~ky~---~vkFvkI~~ 159 (252)
....|+.|+...||.|+.+.+.+ ..|.++|+ .++|+....
T Consensus 11 a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~ 54 (186)
T 3bci_A 11 GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNL 54 (186)
T ss_dssp CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEec
Confidence 35788899999999999999998 57888896 477776654
No 299
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=92.81 E-value=0.17 Score=41.80 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=32.8
Q ss_pred CceEEEEEEcCCCchhhhHHHHH-HHHHHHCC---CceEEEEec
Q 025454 120 DVWVVVILYKDGFAECGLLMQCL-EELARKYP---ATKFVKIIS 159 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l-~~LA~ky~---~vkFvkI~~ 159 (252)
....||.|+...||+|+.+.+.+ ..|.++|+ .++|+..+.
T Consensus 29 a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 29 APVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 45789999999999999999886 67778885 488887754
No 300
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=92.17 E-value=0.084 Score=44.89 Aligned_cols=50 Identities=18% Similarity=0.289 Sum_probs=38.8
Q ss_pred eEEcChhhHHHHHHcCCCCceEEEEEE-cCCCchhhhHHHHHHHHHHHCCC--ceEEEEec
Q 025454 102 VMPISGSDFVREVSQAPPDVWVVVILY-KDGFAECGLLMQCLEELARKYPA--TKFVKIIS 159 (252)
Q Consensus 102 v~eIs~~~f~~~V~~~~~~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~~--vkFvkI~~ 159 (252)
..+|+-.+| +|+|||+.|| ++||+.|..-...|+.+..+|.. +.++-|..
T Consensus 46 g~~vsLsd~--------~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~ 98 (219)
T 3tue_A 46 FKKISLSSY--------KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSI 98 (219)
T ss_dssp EEEEEGGGG--------TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEES
T ss_pred CcEEehHHh--------CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeC
Confidence 345555555 3579999999 99999999999999999888854 77776643
No 301
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=91.70 E-value=0.41 Score=40.04 Aligned_cols=94 Identities=11% Similarity=0.115 Sum_probs=57.6
Q ss_pred EEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEec--cCCCCCCCCCcccEEEEEE-C
Q 025454 103 MPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIS--TDCIPNYPDRNLPTVLVYN-N 179 (252)
Q Consensus 103 ~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~--~~~~~~~~i~~lPTlliy~-~ 179 (252)
..++..++...+... ...++++.|....|..++. .+..+ ..++.+.|..+.. ..+.++|+|.++||+++|. |
T Consensus 141 ~~~~~~~l~~~~~~~-~~~~~al~f~~~~~~~~~~---~~~d~-~~~~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~ 215 (244)
T 3q6o_A 141 EPAXLEEIDGFFARN-NEEYLALIFEXGGSYLARE---VALDL-SQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRN 215 (244)
T ss_dssp SCCCHHHHHTHHHHC-CCSEEEEEEECTTCCHHHH---HHHHT-TTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETT
T ss_pred ccccHHHHHHHhhcC-CCceEEEEEEECCcchHHH---HHHHh-ccCCceEEEEEeCchHHHHHHcCCCCCCeEEEEeCC
Confidence 345667777666654 3467888888776433222 22221 1345577777766 3567999999999997776 5
Q ss_pred CeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 180 GAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 180 G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|+...--++ .-+.+.+..+|.+
T Consensus 216 g~~~~~~~~------~~~r~~~~~~l~~ 237 (244)
T 3q6o_A 216 GSVSRVPVL------MESRSFYTAYLQR 237 (244)
T ss_dssp SCEEECCCS------SSSHHHHHHHHHT
T ss_pred CCeEeeccc------cccHHHHHHHHHh
Confidence 655432222 2356677777775
No 302
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=90.55 E-value=0.31 Score=41.17 Aligned_cols=38 Identities=11% Similarity=0.158 Sum_probs=31.0
Q ss_pred ceEEEEEEcCCCchhhhHHHH-HHHHHHHCC---CceEEEEe
Q 025454 121 VWVVVILYKDGFAECGLLMQC-LEELARKYP---ATKFVKII 158 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~-l~~LA~ky~---~vkFvkI~ 158 (252)
...|+.|+...||+|+.+.+. +..|.++|+ .++|+...
T Consensus 40 ~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 40 PILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp SEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 567899999999999999985 578888884 47777654
No 303
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=90.21 E-value=0.21 Score=40.71 Aligned_cols=38 Identities=5% Similarity=-0.059 Sum_probs=30.1
Q ss_pred ceEEEEEEcCCCchhhhHHHHHHHHHHHC-CC-ceEEEEe
Q 025454 121 VWVVVILYKDGFAECGLLMQCLEELARKY-PA-TKFVKII 158 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l~~LA~ky-~~-vkFvkI~ 158 (252)
..+||.|....||+|+.+.+.+..+.++| ++ ++|+--+
T Consensus 15 ~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 15 PRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp SEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 36788888999999999999988876665 64 7776554
No 304
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=89.91 E-value=0.61 Score=44.46 Aligned_cols=55 Identities=16% Similarity=0.228 Sum_probs=38.3
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC----------CCCCCCCCcccEEEEEECCeEEEE
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTD----------CIPNYPDRNLPTVLVYNNGAVKAN 185 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~----------~~~~~~i~~lPTlliy~~G~~v~~ 185 (252)
|+.|+.+|||.|+.+...|..+. +.|-.++.+. +....+...+|.+ |.+|+.+..
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~~~-----i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v--~i~g~~igG 84 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAEAK-----IKHATIELDQLSNGSAIQKCLASFSKIETVPQM--FVRGKFIGD 84 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT-----CCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEE--EETTEEEEC
T ss_pred EEEEECCCChhHHHHHHHHHHCC-----CCcEEEEcccCcchHHHHHHHHHHhCCceeCEE--EECCEEEEe
Confidence 66688999999999999988753 3344444331 1124577889987 678988753
No 305
>1yyb_A Programmed cell death protein 5; PDCD5(1-26), solution structure, apoptosis; NMR {Homo sapiens} SCOP: j.121.1.1
Probab=89.36 E-value=0.28 Score=27.86 Aligned_cols=18 Identities=44% Similarity=0.672 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 025454 76 DRFLEEYRKKRLAEMREA 93 (252)
Q Consensus 76 d~~l~~yR~kRl~el~~~ 93 (252)
|..|++.|++||++|+..
T Consensus 4 d~ELeair~~rl~~lq~~ 21 (27)
T 1yyb_A 4 DEELEALRRQRLAELQAK 21 (27)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHhc
Confidence 456999999999999775
No 306
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=89.05 E-value=0.56 Score=38.26 Aligned_cols=39 Identities=15% Similarity=0.194 Sum_probs=29.4
Q ss_pred CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 163 IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 163 ~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
...++|.++|||+++.||+.+..+.|.. +.+.|..+|.+
T Consensus 169 a~~~gv~g~Pt~~i~~~G~~~~~~~G~~------~~~~l~~~l~~ 207 (216)
T 2in3_A 169 VAQWGISGFPALVVESGTDRYLITTGYR------PIEALRQLLDT 207 (216)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEESSCC------CHHHHHHHHHH
T ss_pred HHHcCCcccceEEEEECCEEEEeccCCC------CHHHHHHHHHH
Confidence 3678999999999999999776677753 35666666654
No 307
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=89.01 E-value=0.3 Score=42.84 Aligned_cols=29 Identities=10% Similarity=0.134 Sum_probs=25.1
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHHHHHH
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEELARK 148 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~LA~k 148 (252)
++.+|+.|+.+.||.|+.+.+.+..+...
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 46799999999999999999999966554
No 308
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=87.86 E-value=1 Score=34.63 Aligned_cols=60 Identities=8% Similarity=0.080 Sum_probs=36.0
Q ss_pred EEEEEEcCCCchhhhHHHHHH--HHHHHCCCceEEEEeccC-------CCCCC--------CCCcccEEEEEECCeEEEE
Q 025454 123 VVVILYKDGFAECGLLMQCLE--ELARKYPATKFVKIISTD-------CIPNY--------PDRNLPTVLVYNNGAVKAN 185 (252)
Q Consensus 123 VVV~fya~wc~~Ck~l~~~l~--~LA~ky~~vkFvkI~~~~-------~~~~~--------~i~~lPTlliy~~G~~v~~ 185 (252)
||+.|++++||.|+....+-. .|... .+|.|-.++.+. ..++. +...+|. ||.+|..++.
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~-kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQ--IFi~~~~iGG 77 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEA-NKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQ--IFNESQYRGD 77 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHH-TTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCE--EEETTEEEEE
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHH-CCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCE--EEECCEEEec
Confidence 466778999999964433321 11111 358898888752 12344 5667884 5578876653
No 309
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=86.72 E-value=0.71 Score=37.73 Aligned_cols=39 Identities=13% Similarity=0.108 Sum_probs=29.5
Q ss_pred CceEEEEEE-cCCCchhh-hHHHHHHHHHHHC---CCce-EEEEe
Q 025454 120 DVWVVVILY-KDGFAECG-LLMQCLEELARKY---PATK-FVKII 158 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck-~l~~~l~~LA~ky---~~vk-FvkI~ 158 (252)
+++||+.|| ..||+.|. .-.+.|.+.+.++ .++. ++-|.
T Consensus 43 gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS 87 (182)
T 1xiy_A 43 NKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCIT 87 (182)
T ss_dssp TCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEE
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 468888887 57999999 7778888888877 4564 66553
No 310
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=86.25 E-value=1.1 Score=37.09 Aligned_cols=39 Identities=10% Similarity=-0.089 Sum_probs=28.9
Q ss_pred CceEEEEEEcCCCchhhhHHHHHHH-HHHHC---CCceEEEEe
Q 025454 120 DVWVVVILYKDGFAECGLLMQCLEE-LARKY---PATKFVKII 158 (252)
Q Consensus 120 ~~~VVV~fya~wc~~Ck~l~~~l~~-LA~ky---~~vkFvkI~ 158 (252)
...+||.|+...||.|+.+.+.+.. |.++| +.++|+-.+
T Consensus 15 a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~ 57 (205)
T 3gmf_A 15 AKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRN 57 (205)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 3567889999999999999987755 44488 237776443
No 311
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=80.39 E-value=1.1 Score=42.57 Aligned_cols=93 Identities=11% Similarity=0.120 Sum_probs=57.3
Q ss_pred eEEcChhhHHHHHHcCCCCceEEEEEEcCCCchhhhHHHHHHHHHHH---CCCceEEEEecc--CCCCCCCCCcccEEEE
Q 025454 102 VMPISGSDFVREVSQAPPDVWVVVILYKDGFAECGLLMQCLEELARK---YPATKFVKIIST--DCIPNYPDRNLPTVLV 176 (252)
Q Consensus 102 v~eIs~~~f~~~V~~~~~~~~VVV~fya~wc~~Ck~l~~~l~~LA~k---y~~vkFvkI~~~--~~~~~~~i~~lPTlli 176 (252)
+..++..++...+... ...+++|.|+.... .....++.. ++.+.|..+..+ .+.++|+|..+||+++
T Consensus 140 l~~it~~~l~~~l~~~-~~~~vallF~~~~s-------~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl 211 (519)
T 3t58_A 140 LEPAKLNDIDGFFTRN-KADYLALVFEREDS-------YLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYL 211 (519)
T ss_dssp CSBCCHHHHTTGGGSC-CCSEEEEEEECTTC-------CHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEE
T ss_pred cCcCCHHHHHHHhccC-CCCeEEEEecCCch-------HHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEE
Confidence 4556777776666554 45688888887652 133444443 345777666554 4568999999999999
Q ss_pred EECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 177 YNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 177 y~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
|..+..+.++... .-+..-+..+|.+
T Consensus 212 ~~~nGk~~~~~v~-----~~~r~~~~~~l~~ 237 (519)
T 3t58_A 212 LLRNGSVSRVPVL-----VESRSFYTSYLRG 237 (519)
T ss_dssp EETTSCEEECCCS-----SCSHHHHHHHHTT
T ss_pred EeCCCceeecccc-----cccHHHHHHHHHH
Confidence 9865433333211 1123445666766
No 312
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=80.33 E-value=1.3 Score=35.87 Aligned_cols=38 Identities=8% Similarity=-0.085 Sum_probs=29.5
Q ss_pred CceEEEEEE-cCCCchhhhHHHHHHHHHHHCC--Cce-EEEE
Q 025454 120 DVWVVVILY-KDGFAECGLLMQCLEELARKYP--ATK-FVKI 157 (252)
Q Consensus 120 ~~~VVV~fy-a~wc~~Ck~l~~~l~~LA~ky~--~vk-FvkI 157 (252)
+++||+.|| ..||+.|..-.+.|.+.+.+|. ++. ++-|
T Consensus 42 gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigI 83 (171)
T 2xhf_A 42 GRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACI 83 (171)
T ss_dssp TSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEE
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 368888888 4699999998888888877775 564 6555
No 313
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=77.50 E-value=3.2 Score=33.67 Aligned_cols=37 Identities=14% Similarity=0.218 Sum_probs=31.3
Q ss_pred EEEEEEcCCCchhhhHHHHHHHHHHHCCC-ceEEEEec
Q 025454 123 VVVILYKDGFAECGLLMQCLEELARKYPA-TKFVKIIS 159 (252)
Q Consensus 123 VVV~fya~wc~~Ck~l~~~l~~LA~ky~~-vkFvkI~~ 159 (252)
.|..|+.+.||.|-...+.|.+++++|+. +.|.....
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~~~v~v~~~p~ 41 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLPGVIQFEYVVG 41 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSCTTSEEEEEEC
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCCCCceEEEEec
Confidence 57788899999999999999999999974 77766553
No 314
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=74.66 E-value=1.2 Score=34.24 Aligned_cols=36 Identities=22% Similarity=0.311 Sum_probs=29.8
Q ss_pred ceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEec
Q 025454 121 VWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIS 159 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~ 159 (252)
+.+++.|..|-|+.|+..+..|..|..+| ..++||.
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~ledeY---~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKSEY---DILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTTTE---EEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhccc---cEEEEEe
Confidence 35899999999999999999998887776 4566664
No 315
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=73.16 E-value=5.1 Score=32.42 Aligned_cols=28 Identities=18% Similarity=0.088 Sum_probs=23.3
Q ss_pred CCCCCCcccEEEEEECCeEEEEeecccc
Q 025454 164 PNYPDRNLPTVLVYNNGAVKANYVGLRS 191 (252)
Q Consensus 164 ~~~~i~~lPTlliy~~G~~v~~~vG~~~ 191 (252)
..++|.++|||+|..+|+.+....|..+
T Consensus 163 ~~~gv~g~Pt~~v~~~~~~~~~~~g~~~ 190 (208)
T 3kzq_A 163 KSLGVNSYPSLVLQINDAYFPIEVDYLS 190 (208)
T ss_dssp HHTTCCSSSEEEEEETTEEEEECCCSSC
T ss_pred HHcCCCcccEEEEEECCEEEEeeCCCCC
Confidence 5689999999999999988877777643
No 316
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=71.75 E-value=8.4 Score=29.88 Aligned_cols=70 Identities=9% Similarity=0.096 Sum_probs=47.7
Q ss_pred CchhhhHH-HHHHHH----HHHCCCceEEEEeccCCCCCCCCCcccEEEEEEC-CeEEEEeecccccCCCCCHHHHHHHH
Q 025454 132 FAECGLLM-QCLEEL----ARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNN-GAVKANYVGLRSFGRRCTPEGVALVL 205 (252)
Q Consensus 132 c~~Ck~l~-~~l~~L----A~ky~~vkFvkI~~~~~~~~~~i~~lPTlliy~~-G~~v~~~vG~~~~G~~~~~e~lE~~L 205 (252)
|+.|++-. |.+..+ +..|+++++-.|.. .-|+|++|.. |+.+.++. +. .++.+.|+.+|
T Consensus 22 C~~CkL~~~PeIk~FIk~d~~~y~~v~Vkyi~G----------a~P~LvL~D~~G~e~E~I~-Ie----kw~~d~I~efL 86 (129)
T 2a2p_A 22 CGGCQLNRLKEVKAFVTEDIQLYHNLVMKHLPG----------ADPELVLLSRNYQELERIP-LS----QMTRDEINALV 86 (129)
T ss_dssp ETTCCCSTTHHHHHHTTTHHHHBTTEEEEEESS----------CCCEEEEECSSSCCCEEEE-CS----SSCHHHHHHHH
T ss_pred CCCcccccchhHHHHHhCchhhcCceeEEEeCC----------CCCEEEEecCCCCEEEEee-cc----cCCHHHHHHHH
Confidence 88998642 333332 44688876655543 3688888864 77665543 33 56899999999
Q ss_pred HhcCCCCCCCC
Q 025454 206 CQSDPVLNDGQ 216 (252)
Q Consensus 206 ~~~g~i~~~~~ 216 (252)
.+.|..+....
T Consensus 87 ~e~GF~rk~~~ 97 (129)
T 2a2p_A 87 QELGFYRKSAP 97 (129)
T ss_dssp HHHTCCBCSST
T ss_pred HHcCCcccccc
Confidence 99998877644
No 317
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=68.50 E-value=6.4 Score=29.93 Aligned_cols=32 Identities=22% Similarity=0.199 Sum_probs=23.3
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST 160 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~ 160 (252)
|+.|+.++|+.|+.....|... ++.|-.++..
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~-----gi~y~~~di~ 34 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH-----EIPFVERNIF 34 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCEEEEETT
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CCceEEEEcc
Confidence 4567889999999988888763 3555555543
No 318
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=66.11 E-value=13 Score=34.68 Aligned_cols=54 Identities=26% Similarity=0.223 Sum_probs=42.0
Q ss_pred ceEEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEeccCCCCCCCCCcccEEEEEECCe
Q 025454 121 VWVVVILYKDGFAECGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGA 181 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~~~~~~~i~~lPTlliy~~G~ 181 (252)
.+|.+.++.+.|..|..|...|++++.--+.+++...+ +. . ...|+|.+.++|+
T Consensus 19 ~~v~l~~~~~~~~~~~~~~~~~~~~~~~s~~i~~~~~~-~~--~----~~~p~~~~~~~~~ 72 (521)
T 1hyu_A 19 KPVELIATLDDSAKSAEIKELLAEIAELSDKVTFKEDN-TL--P----VRKPSFLITNPGS 72 (521)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHHTTCTTEEEEECT-TS--S----SCSSEEEEECTTC
T ss_pred CCEEEEEEeCCCcchHHHHHHHHHHHHhCCceEEEEcC-Cc--c----cCCCEEEEecCCC
Confidence 46888888999999999999999999877777763221 11 0 4689999998885
No 319
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=64.77 E-value=4.3 Score=30.11 Aligned_cols=31 Identities=10% Similarity=-0.111 Sum_probs=22.2
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEec
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIIS 159 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~ 159 (252)
|+.|+.++|+.|+.....|... ++.|-.++.
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~-----gi~~~~~di 32 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEH-----KVAYDFHDY 32 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-----TCCEEEEEH
T ss_pred EEEEECCCChHHHHHHHHHHHC-----CCceEEEee
Confidence 4457789999999988887662 455555554
No 320
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=60.62 E-value=5.6 Score=29.73 Aligned_cols=31 Identities=13% Similarity=-0.064 Sum_probs=22.0
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEec
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIIS 159 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~ 159 (252)
|..|+.++|+.|+.....|.+. ++.|-.++.
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-----gi~y~~~di 37 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-----GIDYTFHDY 37 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----TCCEEEEEH
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCcEEEEee
Confidence 5567789999999988888763 344544543
No 321
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=57.44 E-value=12 Score=30.14 Aligned_cols=35 Identities=17% Similarity=0.054 Sum_probs=26.0
Q ss_pred CCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhcC
Q 025454 164 PNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQSD 209 (252)
Q Consensus 164 ~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~g 209 (252)
..++|.++|||+| ||+ .+.|.. ..+.|+.+|.+.+
T Consensus 167 ~~~Gv~GvPtfvv--~g~---~~~G~~------~~~~l~~~l~~~~ 201 (202)
T 3fz5_A 167 VARGIFGSPFFLV--DDE---PFWGWD------RMEMMAEWIRTGG 201 (202)
T ss_dssp HHTTCCSSSEEEE--TTE---EEESGG------GHHHHHHHHHTCC
T ss_pred HHCCCCcCCEEEE--CCE---EEecCC------CHHHHHHHHhccC
Confidence 4689999999998 886 345543 3578888887654
No 322
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=57.25 E-value=8.1 Score=30.00 Aligned_cols=33 Identities=12% Similarity=0.022 Sum_probs=23.3
Q ss_pred CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 163 IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 163 ~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
...++|.++|||+| ||+.+ .|. .+.+.|+.+|.
T Consensus 142 a~~~gv~gtPt~vv--ng~~~---~G~------~~~~~l~~~i~ 174 (175)
T 1z6m_A 142 ANAAHIQFVPTIII--GEYIF---DES------VTEEELRGYIE 174 (175)
T ss_dssp HHHHTCCSSCEEEE--TTEEE---CTT------CCHHHHHHHHT
T ss_pred HHHcCCCCcCeEEE--CCEEc---cCC------CCHHHHHHHhc
Confidence 46789999999766 89743 443 34677777664
No 323
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=57.08 E-value=14 Score=29.54 Aligned_cols=36 Identities=11% Similarity=0.092 Sum_probs=27.9
Q ss_pred eEEEEEEcCCCchhhhHHHHHHHHHHHCC-CceEEEE
Q 025454 122 WVVVILYKDGFAECGLLMQCLEELARKYP-ATKFVKI 157 (252)
Q Consensus 122 ~VVV~fya~wc~~Ck~l~~~l~~LA~ky~-~vkFvkI 157 (252)
..|+.|+...||.|....+.+..|++.+. ++.|.-.
T Consensus 8 ~~I~~f~D~~CP~C~~~~~~~~~l~~~~~~~v~v~~~ 44 (216)
T 2in3_A 8 PVLWYIADPMCSWCWGFAPVIENIRQEYSAFLTVKIM 44 (216)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred eeEEEEECCCCchhhcchHHHHHHHhcCCCCeEEEEe
Confidence 45777888999999999999999988433 4666554
No 324
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=56.61 E-value=7.3 Score=29.22 Aligned_cols=32 Identities=13% Similarity=0.137 Sum_probs=23.4
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST 160 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~ 160 (252)
|..|+.++|+.|+.....|... ++.|-.++..
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~-----gi~~~~~di~ 33 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRH-----DVVFQEHNIM 33 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-----TCCEEEEETT
T ss_pred EEEEeCCCCHHHHHHHHHHHHc-----CCCeEEEecc
Confidence 4567889999999988877652 4666666654
No 325
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=55.71 E-value=11 Score=29.57 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=25.3
Q ss_pred CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHhc
Q 025454 163 IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQS 208 (252)
Q Consensus 163 ~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~~ 208 (252)
...++|.++|||+| ||+.+ .|. .+.+.|..+|.+.
T Consensus 142 a~~~gv~GtPt~vv--nG~~~---~G~------~~~~~l~~~i~~~ 176 (186)
T 3bci_A 142 AKDNHIKTTPTAFI--NGEKV---EDP------YDYESYEKLLKDK 176 (186)
T ss_dssp HHHTTCCSSSEEEE--TTEEC---SCT------TCHHHHHHHHHC-
T ss_pred HHHcCCCCCCeEEE--CCEEc---CCC------CCHHHHHHHHHHH
Confidence 46789999999988 88753 343 4578888888753
No 326
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=54.94 E-value=13 Score=30.21 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=24.8
Q ss_pred CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 163 IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 163 ~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
...++|.++|||+| ||+. +.|. .+.+.|..+|.+
T Consensus 156 a~~~gV~gtPtfvv--nG~~---~~G~------~~~e~l~~~i~~ 189 (202)
T 3gha_A 156 NQKMNIQATPTIYV--NDKV---IKNF------ADYDEIKETIEK 189 (202)
T ss_dssp HHHTTCCSSCEEEE--TTEE---CSCT------TCHHHHHHHHHH
T ss_pred HHHcCCCcCCEEEE--CCEE---ecCC------CCHHHHHHHHHH
Confidence 36789999999998 8875 3343 356777777764
No 327
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=54.27 E-value=5.8 Score=31.94 Aligned_cols=35 Identities=14% Similarity=0.070 Sum_probs=24.7
Q ss_pred CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHH
Q 025454 163 IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVL 205 (252)
Q Consensus 163 ~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L 205 (252)
...++|.++|||+| ||+.+..+.| ..+.+++..+|
T Consensus 147 a~~~GV~gtPtf~i--ng~~~~~~s~------~~~~e~w~~~l 181 (182)
T 3gn3_A 147 ARQNGIHVSPTFMI--NGLVQPGMSS------GDPVSKWVSDI 181 (182)
T ss_dssp HHHHTCCSSSEEEE--TTEECTTCCT------TSCHHHHHHHH
T ss_pred HHHCCCCccCEEEE--CCEEccCCCC------CCCHHHHHHHh
Confidence 36789999999987 8987643433 34667666665
No 328
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=52.99 E-value=12 Score=29.94 Aligned_cols=27 Identities=26% Similarity=0.113 Sum_probs=24.6
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCC
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYP 150 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~ 150 (252)
|..|+..-||.|....+.|.++++.|+
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~~ 29 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDYG 29 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcC
Confidence 667888999999999999999999986
No 329
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=52.65 E-value=10 Score=30.51 Aligned_cols=33 Identities=9% Similarity=0.031 Sum_probs=23.6
Q ss_pred CCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 164 PNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 164 ~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
..++|.++|||+| ||+ .+.|.. ..+.|+.+|.+
T Consensus 161 ~~~Gv~G~Ptfvi--~g~---~~~G~~------~~~~l~~~l~~ 193 (203)
T 2imf_A 161 IERKVFGVPTMFL--GDE---MWWGND------RLFMLESAMGR 193 (203)
T ss_dssp HHTTCCSSSEEEE--TTE---EEESGG------GHHHHHHHHHH
T ss_pred HHCCCCcCCEEEE--CCE---EEECCC------CHHHHHHHHhc
Confidence 5689999999988 886 345653 35667776665
No 330
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=47.76 E-value=12 Score=28.03 Aligned_cols=33 Identities=15% Similarity=0.139 Sum_probs=23.1
Q ss_pred EEEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc
Q 025454 123 VVVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST 160 (252)
Q Consensus 123 VVV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~ 160 (252)
.|..|+.|+|+.|+.....|..- ++.|-.++..
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~~-----gi~~~~~di~ 36 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDDL-----AWDYDAIDIK 36 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHHH-----TCCEEEEETT
T ss_pred eEEEEeCCCChHHHHHHHHHHHc-----CCceEEEEec
Confidence 35567799999999988777653 3555555543
No 331
>2jxn_A Uncharacterized protein YMR074C; YMR074CP, PDCD5-like protein, phosphoprotein, unknown functi; HET: MTN; NMR {Saccharomyces cerevisiae}
Probab=46.45 E-value=5.8 Score=30.69 Aligned_cols=17 Identities=29% Similarity=0.378 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 025454 77 RFLEEYRKKRLAEMREA 93 (252)
Q Consensus 77 ~~l~~yR~kRl~el~~~ 93 (252)
+.|+..|++||+||++.
T Consensus 3 ~ELeaIR~~Rl~ELq~q 19 (127)
T 2jxn_A 3 PELQCIRECRLAQLKNN 19 (127)
T ss_dssp HHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 47999999999999864
No 332
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=44.15 E-value=17 Score=29.67 Aligned_cols=33 Identities=12% Similarity=0.239 Sum_probs=24.4
Q ss_pred CCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHHh
Q 025454 164 PNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQ 207 (252)
Q Consensus 164 ~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~~ 207 (252)
..++|.++|||+| ||+.+ .|. .+.+.|+.+|.+
T Consensus 162 ~~~GV~GtPtfvv--ng~~~---~G~------~~~e~l~~~i~~ 194 (205)
T 3gmf_A 162 NQYNVSGTPSFMI--DGILL---AGT------HDWASLRPQILA 194 (205)
T ss_dssp HHHCCCSSSEEEE--TTEEC---TTC------CSHHHHHHHHHH
T ss_pred HHcCCccCCEEEE--CCEEE---eCC------CCHHHHHHHHHH
Confidence 5789999999998 88753 343 356778777765
No 333
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=43.65 E-value=13 Score=27.97 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=21.7
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEec
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIIS 159 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~ 159 (252)
|..|+.|+|+.|+.....|.+- ++.|-.++.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~-----gi~~~~~di 36 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIEN-----NIEYTNRLI 36 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHHT-----TCCCEEEET
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCceEEEec
Confidence 4567799999999988777652 344544554
No 334
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=43.19 E-value=15 Score=29.26 Aligned_cols=36 Identities=22% Similarity=0.244 Sum_probs=23.8
Q ss_pred CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHHHH
Q 025454 163 IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLC 206 (252)
Q Consensus 163 ~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~L~ 206 (252)
...++|.++|||+| ||+.+-...|.. +.+.+...|.
T Consensus 145 a~~~gv~GtPtfvv--ng~~~v~~~Ga~------~~e~~~~~i~ 180 (185)
T 3feu_A 145 SEKSGISSVPTFVV--NGKYNVLIGGHD------DPKQIADTIR 180 (185)
T ss_dssp HHHHTCCSSSEEEE--TTTEEECGGGCS------SHHHHHHHHH
T ss_pred HHHcCCCccCEEEE--CCEEEEecCCCC------CHHHHHHHHH
Confidence 46789999999997 887543334443 3455655554
No 335
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=42.50 E-value=24 Score=32.48 Aligned_cols=19 Identities=26% Similarity=0.445 Sum_probs=16.5
Q ss_pred cccEEEEEECCeEEEEeec
Q 025454 170 NLPTVLVYNNGAVKANYVG 188 (252)
Q Consensus 170 ~lPTlliy~~G~~v~~~vG 188 (252)
.-|..++|++|+.+.++-+
T Consensus 365 ~~~~~~lf~~G~~~~~v~~ 383 (406)
T 4g9p_A 365 EEPKAPVYADGKLLTILKG 383 (406)
T ss_dssp SCSEEEEEETTEEEEEEES
T ss_pred CCCeeeEEECCEEEEecCH
Confidence 5789999999999988765
No 336
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=40.42 E-value=1.3e+02 Score=23.52 Aligned_cols=101 Identities=16% Similarity=0.208 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCceEEc-ChhhHHHHHHcCCCCceEEEEEEcCCCchh-hhHHHHHHHHHH---HCCCce
Q 025454 79 LEEYRKKRLAEMREATKISRFGSVMPI-SGSDFVREVSQAPPDVWVVVILYKDGFAEC-GLLMQCLEELAR---KYPATK 153 (252)
Q Consensus 79 l~~yR~kRl~el~~~~~~~~fG~v~eI-s~~~f~~~V~~~~~~~~VVV~fya~wc~~C-k~l~~~l~~LA~---ky~~vk 153 (252)
.+.|-+.-++.|++.....+| .++ |.++....+.+. +|+..||- .+-||=- ...+|.....+- +.|+ .
T Consensus 8 ~~mY~~~lV~pmR~ELt~~Gf---~eL~T~e~Vd~a~~~~-~GTtlVvV--NSVCGCAag~ARPaa~~a~l~~~kkPD-~ 80 (147)
T 3fhk_A 8 YEEYMRQLVVPMRRELTGAGF---EELTTAEEVENFMEKA-EGTTLVVV--NSVCGCAAGLARPAATQAVLQNDKTPD-N 80 (147)
T ss_dssp HHHHHHHHHHHHHHHHHTTTC---EECCSHHHHHHHHHHC-CSEEEEEE--ECSSHHHHHTHHHHHHHHHHHCSSCCS-E
T ss_pred HHHHHHHHHHHHHHHHHHhCc---cccCCHHHHHHHHhcC-CCcEEEEE--eccccccccccCHHHHHHhhhcCCCCC-c
Confidence 467888888888887766544 566 666666666663 34333222 3456422 233455444323 3343 4
Q ss_pred EEEEecc----------CCCCCCCCCcccEEEEEECCeEEEEee
Q 025454 154 FVKIIST----------DCIPNYPDRNLPTVLVYNNGAVKANYV 187 (252)
Q Consensus 154 FvkI~~~----------~~~~~~~i~~lPTlliy~~G~~v~~~v 187 (252)
++.|=+. +-...|+- +=|++.+||+|++|.-+-
T Consensus 81 lvTVFAGqDkEAt~~aR~yf~~~pP-SSPS~ALfKdGelVh~ie 123 (147)
T 3fhk_A 81 TVTVFAGQDKEATAKMREYFTGAAP-SSPSMALLKGKEVVHFIP 123 (147)
T ss_dssp EEEEETTTSHHHHHHHHTTSTTCCC-CSSEEEEEETTEEEEEEC
T ss_pred eEEeccCCCHHHHHHHHHhcCCCCC-CCchheeeeCCEEEEEee
Confidence 5555332 12244543 569999999999997553
No 337
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=38.14 E-value=26 Score=28.53 Aligned_cols=29 Identities=14% Similarity=0.051 Sum_probs=24.7
Q ss_pred eEEEEEEcCCCchhhhHHHHHHHHHHHCC
Q 025454 122 WVVVILYKDGFAECGLLMQCLEELARKYP 150 (252)
Q Consensus 122 ~VVV~fya~wc~~Ck~l~~~l~~LA~ky~ 150 (252)
..|..|+..-||.|-...+.|.++++.+.
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~~ 34 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLWN 34 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTSS
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHcC
Confidence 35677788899999999999999988773
No 338
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=37.80 E-value=15 Score=28.42 Aligned_cols=32 Identities=9% Similarity=0.084 Sum_probs=22.0
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEecc
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIIST 160 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~ 160 (252)
|..|+.++|+.|+.....|.. .++.|-.++..
T Consensus 4 itiY~~p~C~~crkak~~L~~-----~gi~~~~idi~ 35 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRN-----SGTEPTIILYL 35 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-----TTCCCEEECTT
T ss_pred EEEEECCCChHHHHHHHHHHH-----cCCCEEEEECC
Confidence 345678999999998877765 23555555543
No 339
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=37.71 E-value=1.1e+02 Score=21.96 Aligned_cols=71 Identities=14% Similarity=0.088 Sum_probs=46.3
Q ss_pred EEEEEEcCCCchhhhHHHHH----HHHHHHCCCceEEEEeccCCCCCCCCCcccEEEEE-ECCeEEEEeecccccCCCCC
Q 025454 123 VVVILYKDGFAECGLLMQCL----EELARKYPATKFVKIISTDCIPNYPDRNLPTVLVY-NNGAVKANYVGLRSFGRRCT 197 (252)
Q Consensus 123 VVV~fya~wc~~Ck~l~~~l----~~LA~ky~~vkFvkI~~~~~~~~~~i~~lPTlliy-~~G~~v~~~vG~~~~G~~~~ 197 (252)
-|...|-+|.+.++-+...+ .+++...|++.|+--... ..-|.+.++ .+|.... +.+ .+++
T Consensus 21 ~l~~~yc~~~~sS~G~R~Fl~~~l~~~k~~NP~v~i~v~~~~--------~~~P~i~a~Y~~G~ek~--i~l----~n~s 86 (102)
T 1s3a_A 21 EIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECS--------DVQPKLWARYAFGQETN--VPL----NNFS 86 (102)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHTHHHHHHHSTTCCEEEECCC--------SSSCEEEEEESSCCEEE--EEC----TTCC
T ss_pred EEEEEEcCCCCCchhHHHHHHHhhHHHHHHCCCceEEEEECC--------CCCCEEEEEECCCCEEE--EEC----CCCC
Confidence 35556778888888777665 457888999988633221 147877765 4686432 332 3567
Q ss_pred HHHHHHHHHh
Q 025454 198 PEGVALVLCQ 207 (252)
Q Consensus 198 ~e~lE~~L~~ 207 (252)
.++|+..|..
T Consensus 87 ~~eI~~~l~~ 96 (102)
T 1s3a_A 87 ADQVTRALEN 96 (102)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877754
No 340
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=36.19 E-value=14 Score=27.81 Aligned_cols=31 Identities=10% Similarity=0.065 Sum_probs=21.3
Q ss_pred EEEEEcCCCchhhhHHHHHHHHHHHCCCceEEEEec
Q 025454 124 VVILYKDGFAECGLLMQCLEELARKYPATKFVKIIS 159 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~ 159 (252)
|..|+.|+|+.|+.....|.. .++.|-.++.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-----~gi~~~~~di 37 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-----QGITPQVVLY 37 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-----TTCCCEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHH-----cCCCcEEEee
Confidence 455678999999998877764 2344544544
No 341
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=33.85 E-value=19 Score=26.85 Aligned_cols=21 Identities=24% Similarity=0.219 Sum_probs=17.0
Q ss_pred EEEEEcCCCchhhhHHHHHHH
Q 025454 124 VVILYKDGFAECGLLMQCLEE 144 (252)
Q Consensus 124 VV~fya~wc~~Ck~l~~~l~~ 144 (252)
|..|+.|+|+.|+.....|..
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~ 26 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN 26 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 455678999999998877765
No 342
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=32.68 E-value=34 Score=28.27 Aligned_cols=41 Identities=10% Similarity=0.016 Sum_probs=25.6
Q ss_pred CC-CCCCcccEEEEEE-CCeEEEEeecccc--cCCCCCHHHHHHHHHh
Q 025454 164 PN-YPDRNLPTVLVYN-NGAVKANYVGLRS--FGRRCTPEGVALVLCQ 207 (252)
Q Consensus 164 ~~-~~i~~lPTlliy~-~G~~v~~~vG~~~--~G~~~~~e~lE~~L~~ 207 (252)
.. ++|.++|||+|+. ||+.+ .|..+ ++.-.+.+.|...|.+
T Consensus 164 ~~~~GV~GtPtfvv~~~nG~~~---~Ga~~~~~~G~~~~e~l~~~I~~ 208 (226)
T 3f4s_A 164 INKLGITAVPIFFIKLNDDKSY---IEHNKVKHGGYKELKYFTNVIDK 208 (226)
T ss_dssp HHHHCCCSSCEEEEEECCTTCC---CCGGGGEEESCCCHHHHHHHHHH
T ss_pred HHHcCCCcCCEEEEEcCCCEEe---eCCCCcccccccCHHHHHHHHHH
Confidence 56 9999999999965 78753 45433 1122346666665543
No 343
>2hvu_A PDCD5-like protein; YMR074CP, solution structure, unknown function; NMR {Saccharomyces cerevisiae} PDB: 2jxn_A*
Probab=29.70 E-value=9.2 Score=29.09 Aligned_cols=17 Identities=29% Similarity=0.425 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHh
Q 025454 78 FLEEYRKKRLAEMREAT 94 (252)
Q Consensus 78 ~l~~yR~kRl~el~~~~ 94 (252)
.|+..|++||+||++..
T Consensus 4 ELe~IR~~rl~eLq~q~ 20 (116)
T 2hvu_A 4 ELQCIRECRLAQLKNNS 20 (116)
T ss_dssp HHHHHHHHHHHTCSCTT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 58999999999998653
No 344
>2lnh_A N-WAsp, neural wiskott-aldrich syndrome protein; protein complex, signaling protein-protein binding complex; NMR {Homo sapiens}
Probab=26.90 E-value=23 Score=23.97 Aligned_cols=16 Identities=6% Similarity=0.048 Sum_probs=13.2
Q ss_pred CCCchhhHHHHHcCCC
Q 025454 13 GASTQWDDIQRKLGNL 28 (252)
Q Consensus 13 ~~~Tew~di~r~~g~~ 28 (252)
+-+.||..+|.+-||=
T Consensus 22 glp~eW~~ll~~sGIs 37 (65)
T 2lnh_A 22 NLDPELKNLFDMCGIS 37 (65)
T ss_dssp GCCTTHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHcCCC
Confidence 4566999999999993
No 345
>1cee_B Wiskott-aldrich syndrome protein WAsp; CDC42 actin regulator GTPase and the GTPase binding domain of ITS effector WAsp; HET: GCP; NMR {Homo sapiens}
Probab=23.28 E-value=34 Score=22.53 Aligned_cols=16 Identities=6% Similarity=0.073 Sum_probs=13.7
Q ss_pred CCCchhhHHHHHcCCC
Q 025454 13 GASTQWDDIQRKLGNL 28 (252)
Q Consensus 13 ~~~Tew~di~r~~g~~ 28 (252)
+.+.+|.-+|.+.||=
T Consensus 33 g~pp~W~~ll~~sGIt 48 (59)
T 1cee_B 33 NLDPDLRSLFSRAGIS 48 (59)
T ss_dssp SCCHHHHHHHTTTTSC
T ss_pred CCCHHHHHHHHHcCCC
Confidence 6688999999998983
No 346
>3tfg_A ALR2278 protein; heme-based sensor domain, GAS binding, signaling protein; HET: HEM; 1.90A {Nostoc SP} PDB: 3tfd_A* 3tfe_A* 3tff_A* 2o09_A* 2o0c_A* 2o0g_A* 3l6j_A* 3tf8_A* 3tf9_A* 3tfa_A*
Probab=22.20 E-value=1.9e+02 Score=23.07 Aligned_cols=31 Identities=6% Similarity=0.125 Sum_probs=28.3
Q ss_pred ceEEEEEEcCCCchhhhHHHHHHHHHHHCCC
Q 025454 121 VWVVVILYKDGFAECGLLMQCLEELARKYPA 151 (252)
Q Consensus 121 ~~VVV~fya~wc~~Ck~l~~~l~~LA~ky~~ 151 (252)
..+++|++++.|+.|..+...++.+|+.|..
T Consensus 128 ~~l~l~Y~S~R~gl~~~~~Gli~~~A~~f~~ 158 (189)
T 3tfg_A 128 KSMELHYQSTRCGLAPMVLGLLHGLGKRFQT 158 (189)
T ss_dssp TEEEEEEECSSSSCHHHHHHHHHHHHHHTTC
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHHHhCC
Confidence 4688999999999999999999999999865
No 347
>2v0f_A Chromodomain-helicase-DNA-binding protein 7; nucleotide-binding, chromatin regulator, charge syndrome, phosphorylation, disease mutation; NMR {Homo sapiens} SCOP: d.76.2.1
Probab=21.26 E-value=31 Score=24.80 Aligned_cols=18 Identities=28% Similarity=0.661 Sum_probs=15.8
Q ss_pred CchhhHHHHHcCCCCCCC
Q 025454 15 STQWDDIQRKLGNLPPKP 32 (252)
Q Consensus 15 ~Tew~di~r~~g~~p~~~ 32 (252)
++.|-+|..+.|.||+--
T Consensus 54 ~p~w~~~v~~~G~lPe~~ 71 (87)
T 2v0f_A 54 APDWTDIVKQSGFVPESM 71 (87)
T ss_dssp CHHHHHHHHHHSSSCGGG
T ss_pred chhHHHHHHhcCCCchhh
Confidence 579999999999999853
No 348
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=21.19 E-value=2.6e+02 Score=20.74 Aligned_cols=58 Identities=16% Similarity=0.170 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHCCCceEEEEeccCC-------------CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHHH
Q 025454 138 LMQCLEELARKYPATKFVKIISTDC-------------IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALV 204 (252)
Q Consensus 138 l~~~l~~LA~ky~~vkFvkI~~~~~-------------~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~~ 204 (252)
++..+..|.++ ++.+.+.+...- ...+++..+|.+++ ||+++.. |.--+.++|..|
T Consensus 29 ~~~~~~~lk~~--Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~V--DGevv~~-------G~yPt~eEl~~~ 97 (110)
T 3kgk_A 29 FSTDVQWLKQS--GVQIERFNLAQQPMSFVQNEKVKAFIEASGAEGLPLLLL--DGETVMA-------GRYPKRAELARW 97 (110)
T ss_dssp HHHHHHHHHHH--TCCEEEEETTTCTTHHHHSHHHHHHHHHHCGGGCCEEEE--TTEEEEE-------SSCCCHHHHHHH
T ss_pred HHHHHHHHHHC--CCeEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCEEEEe-------ccCCCHHHHHHH
Confidence 44444445443 577777775432 25689999998765 8887742 344678999988
Q ss_pred HH
Q 025454 205 LC 206 (252)
Q Consensus 205 L~ 206 (252)
|.
T Consensus 98 lg 99 (110)
T 3kgk_A 98 FG 99 (110)
T ss_dssp HT
T ss_pred hC
Confidence 86
No 349
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=20.46 E-value=1.5e+02 Score=24.02 Aligned_cols=51 Identities=18% Similarity=0.071 Sum_probs=29.7
Q ss_pred EcCCCchhhhHHHHHHHHHHHCCCceEEEEeccC----CCCCCCCCcccEEEEEECCeEE
Q 025454 128 YKDGFAECGLLMQCLEELARKYPATKFVKIISTD----CIPNYPDRNLPTVLVYNNGAVK 183 (252)
Q Consensus 128 ya~wc~~Ck~l~~~l~~LA~ky~~vkFvkI~~~~----~~~~~~i~~lPTlliy~~G~~v 183 (252)
+.++|+.|+.+.=.|..+.- ....+.|+... .....+-..+|+|. .+|..+
T Consensus 26 ~~~~sp~~~rv~~~L~~~gi---~ye~~~v~~~~~~~~~~~~nP~g~vP~L~--~~g~~l 80 (247)
T 2r4v_A 26 SIGNCPFCQRLFMILWLKGV---KFNVTTVDMTRKPEELKDLAPGTNPPFLV--YNKELK 80 (247)
T ss_dssp SBCSCHHHHHHHHHHHHHTC---CCEEEEECCC----------CCSSSCEEE--ETTEEE
T ss_pred cCCCChhHHHHHHHHHHcCC---CcEEEEcCcccchHHHHHhCCCCCCCEEE--ECCEec
Confidence 57899999988766665332 23445554321 22334567899987 577654
No 350
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=20.17 E-value=2.6e+02 Score=20.50 Aligned_cols=59 Identities=15% Similarity=0.151 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHCCCceEEEEeccCC-------------CCCCCCCcccEEEEEECCeEEEEeecccccCCCCCHHHHHH
Q 025454 137 LLMQCLEELARKYPATKFVKIISTDC-------------IPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVAL 203 (252)
Q Consensus 137 ~l~~~l~~LA~ky~~vkFvkI~~~~~-------------~~~~~i~~lPTlliy~~G~~v~~~vG~~~~G~~~~~e~lE~ 203 (252)
.+...+..|.+ .++.+.+.+-..- ...+++..+|.+++ ||+++.. |.--+.++|..
T Consensus 31 ~~~~~~~~lk~--~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~V--DGevv~~-------G~yPt~eEl~~ 99 (106)
T 3ktb_A 31 RIAVVIESLKK--QGIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADALPITLV--DGEIAVS-------QTYPTTKQMSE 99 (106)
T ss_dssp HHHHHHHHHHH--TTCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGCSEEEE--TTEEEEC-------SSCCCHHHHHH
T ss_pred HHHHHHHHHHH--CCCEEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCEEEEe-------ccCCCHHHHHH
Confidence 34444444444 4677777765432 25799999998765 8887642 44457888888
Q ss_pred HHH
Q 025454 204 VLC 206 (252)
Q Consensus 204 ~L~ 206 (252)
||.
T Consensus 100 ~lg 102 (106)
T 3ktb_A 100 WTG 102 (106)
T ss_dssp HHC
T ss_pred HhC
Confidence 874
Done!