Query 025456
Match_columns 252
No_of_seqs 216 out of 1484
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 06:01:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025456.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025456hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1087 GalE UDP-glucose 4-epi 100.0 3.2E-29 6.9E-34 205.7 15.2 172 67-242 1-181 (329)
2 PRK15181 Vi polysaccharide bio 100.0 3.3E-28 7.2E-33 212.1 16.6 173 63-238 12-200 (348)
3 PF01073 3Beta_HSD: 3-beta hyd 100.0 2.4E-28 5.2E-33 206.4 14.4 167 70-238 1-186 (280)
4 PLN00141 Tic62-NAD(P)-related 100.0 6.3E-27 1.4E-31 195.2 22.0 182 64-247 15-197 (251)
5 KOG1502 Flavonol reductase/cin 100.0 5.5E-27 1.2E-31 197.0 17.5 174 65-240 5-201 (327)
6 PLN02214 cinnamoyl-CoA reducta 99.9 9.7E-27 2.1E-31 202.4 18.4 172 65-239 9-197 (342)
7 PLN02572 UDP-sulfoquinovose sy 99.9 1.3E-26 2.7E-31 207.6 16.5 175 62-238 43-263 (442)
8 PRK11908 NAD-dependent epimera 99.9 3.5E-26 7.6E-31 199.2 18.0 169 66-238 1-184 (347)
9 PLN02427 UDP-apiose/xylose syn 99.9 5E-26 1.1E-30 201.0 17.6 171 65-238 13-217 (386)
10 PLN00198 anthocyanidin reducta 99.9 1.3E-25 2.9E-30 194.9 18.3 172 64-238 7-203 (338)
11 TIGR02622 CDP_4_6_dhtase CDP-g 99.9 5.4E-26 1.2E-30 198.2 15.4 172 65-238 3-194 (349)
12 PLN02650 dihydroflavonol-4-red 99.9 2.1E-25 4.6E-30 194.7 18.5 172 65-238 4-198 (351)
13 PRK09987 dTDP-4-dehydrorhamnos 99.9 7E-26 1.5E-30 193.5 14.9 154 67-238 1-159 (299)
14 PLN02662 cinnamyl-alcohol dehy 99.9 2.6E-25 5.7E-30 191.6 17.5 171 65-238 3-197 (322)
15 PLN03209 translocon at the inn 99.9 7.9E-25 1.7E-29 197.3 19.8 170 60-237 74-257 (576)
16 PLN02695 GDP-D-mannose-3',5'-e 99.9 4.3E-25 9.3E-30 193.9 17.8 169 65-238 20-202 (370)
17 PLN02989 cinnamyl-alcohol dehy 99.9 4.1E-25 8.9E-30 190.8 17.3 172 65-239 4-200 (325)
18 PLN02896 cinnamyl-alcohol dehy 99.9 4.9E-25 1.1E-29 192.5 17.3 174 64-239 8-212 (353)
19 PLN02986 cinnamyl-alcohol dehy 99.9 5E-25 1.1E-29 190.0 16.5 172 65-238 4-198 (322)
20 PRK08125 bifunctional UDP-gluc 99.9 4.3E-25 9.3E-30 207.0 17.0 170 65-238 314-498 (660)
21 COG0451 WcaG Nucleoside-diphos 99.9 7.2E-25 1.6E-29 187.8 16.2 168 68-241 2-180 (314)
22 TIGR03589 PseB UDP-N-acetylglu 99.9 7.2E-25 1.6E-29 189.3 16.1 156 65-237 3-172 (324)
23 TIGR01472 gmd GDP-mannose 4,6- 99.9 9.2E-25 2E-29 190.0 16.5 170 67-238 1-191 (343)
24 PLN02583 cinnamoyl-CoA reducta 99.9 3.7E-24 7.9E-29 182.8 18.2 173 65-239 5-199 (297)
25 PLN02686 cinnamoyl-CoA reducta 99.9 2.8E-24 6.2E-29 188.5 17.5 175 62-238 49-251 (367)
26 PF01370 Epimerase: NAD depend 99.9 4.9E-25 1.1E-29 181.3 11.8 165 69-237 1-174 (236)
27 CHL00194 ycf39 Ycf39; Provisio 99.9 2.5E-24 5.4E-29 185.4 16.7 150 67-236 1-150 (317)
28 KOG1371 UDP-glucose 4-epimeras 99.9 1.8E-24 4E-29 179.4 15.1 176 66-242 2-192 (343)
29 PLN02240 UDP-glucose 4-epimera 99.9 4.4E-24 9.5E-29 186.2 17.4 173 63-237 2-191 (352)
30 PLN02166 dTDP-glucose 4,6-dehy 99.9 1.4E-24 2.9E-29 194.0 14.2 166 65-238 119-298 (436)
31 PRK10217 dTDP-glucose 4,6-dehy 99.9 3E-24 6.4E-29 187.6 16.0 171 66-238 1-195 (355)
32 COG1088 RfbB dTDP-D-glucose 4, 99.9 4.5E-24 9.8E-29 174.8 15.8 170 67-239 1-188 (340)
33 PLN02206 UDP-glucuronate decar 99.9 2E-24 4.4E-29 193.2 14.8 165 65-237 118-296 (442)
34 PRK10675 UDP-galactose-4-epime 99.9 4.4E-24 9.6E-29 185.2 15.8 170 67-237 1-184 (338)
35 TIGR03466 HpnA hopanoid-associ 99.9 6.8E-24 1.5E-28 182.9 16.4 167 67-238 1-176 (328)
36 KOG1430 C-3 sterol dehydrogena 99.9 6.6E-24 1.4E-28 181.7 15.9 170 65-238 3-188 (361)
37 PF13460 NAD_binding_10: NADH( 99.9 2.9E-23 6.4E-28 164.7 17.9 152 69-239 1-152 (183)
38 PLN02653 GDP-mannose 4,6-dehyd 99.9 8.7E-24 1.9E-28 183.7 16.1 172 64-238 4-197 (340)
39 PF07993 NAD_binding_4: Male s 99.9 2.6E-24 5.7E-29 179.2 11.2 169 71-240 1-205 (249)
40 TIGR01214 rmlD dTDP-4-dehydror 99.9 1.2E-23 2.7E-28 178.3 14.4 150 68-238 1-155 (287)
41 PLN02657 3,8-divinyl protochlo 99.9 6E-23 1.3E-27 181.4 19.0 157 63-236 57-223 (390)
42 COG4221 Short-chain alcohol de 99.9 1.7E-23 3.7E-28 168.2 12.8 159 65-236 5-189 (246)
43 PLN02260 probable rhamnose bio 99.9 2.6E-23 5.6E-28 195.6 16.0 172 65-238 5-194 (668)
44 PRK06196 oxidoreductase; Provi 99.9 9.3E-23 2E-27 175.5 17.0 175 62-238 22-219 (315)
45 PRK11150 rfaD ADP-L-glycero-D- 99.9 1.9E-23 4.1E-28 179.1 12.6 161 69-238 2-175 (308)
46 COG0300 DltE Short-chain dehyd 99.9 4.4E-23 9.6E-28 170.0 13.9 163 63-238 3-194 (265)
47 PRK10084 dTDP-glucose 4,6 dehy 99.9 8.2E-23 1.8E-27 178.3 16.3 170 67-238 1-202 (352)
48 PRK06180 short chain dehydroge 99.9 5.9E-23 1.3E-27 173.6 14.7 160 65-237 3-187 (277)
49 TIGR01181 dTDP_gluc_dehyt dTDP 99.9 1.2E-22 2.6E-27 174.1 16.2 168 68-238 1-185 (317)
50 PF04321 RmlD_sub_bind: RmlD s 99.9 1E-23 2.3E-28 178.9 9.4 150 67-237 1-155 (286)
51 COG3320 Putative dehydrogenase 99.9 1.1E-22 2.3E-27 172.7 15.2 175 67-242 1-206 (382)
52 PLN02725 GDP-4-keto-6-deoxyman 99.9 4.6E-23 1E-27 176.2 12.9 151 70-238 1-165 (306)
53 PRK06482 short chain dehydroge 99.9 1.2E-22 2.5E-27 171.5 14.7 159 66-237 2-185 (276)
54 PRK06182 short chain dehydroge 99.9 2.3E-22 4.9E-27 169.6 16.3 158 65-238 2-184 (273)
55 COG1091 RfbD dTDP-4-dehydrorha 99.9 1.3E-22 2.9E-27 168.2 14.4 149 68-238 2-155 (281)
56 PLN02996 fatty acyl-CoA reduct 99.9 1.1E-22 2.3E-27 184.4 14.8 174 64-238 9-269 (491)
57 PRK05993 short chain dehydroge 99.9 3.8E-22 8.3E-27 168.6 17.3 157 66-238 4-186 (277)
58 TIGR01179 galE UDP-glucose-4-e 99.9 3.8E-22 8.1E-27 171.7 17.0 169 68-238 1-181 (328)
59 PRK08263 short chain dehydroge 99.9 2.1E-22 4.6E-27 169.9 15.0 161 65-238 2-187 (275)
60 PRK07201 short chain dehydroge 99.9 2.3E-22 5E-27 188.9 16.1 171 67-240 1-185 (657)
61 PRK06179 short chain dehydroge 99.9 1.2E-21 2.5E-26 164.8 17.7 156 65-238 3-183 (270)
62 PRK08339 short chain dehydroge 99.9 3.6E-22 7.8E-27 167.6 13.9 162 63-237 5-194 (263)
63 TIGR02197 heptose_epim ADP-L-g 99.9 3.3E-22 7.1E-27 171.6 13.8 163 69-238 1-175 (314)
64 PRK05717 oxidoreductase; Valid 99.9 3.8E-22 8.3E-27 166.5 13.8 164 62-238 6-194 (255)
65 PF02719 Polysacc_synt_2: Poly 99.9 1.7E-22 3.6E-27 168.5 11.1 153 69-237 1-175 (293)
66 PRK12481 2-deoxy-D-gluconate 3 99.9 6.3E-22 1.4E-26 165.0 14.5 162 64-238 6-194 (251)
67 KOG1429 dTDP-glucose 4-6-dehyd 99.9 8.9E-22 1.9E-26 160.1 14.5 169 62-238 23-205 (350)
68 TIGR01746 Thioester-redct thio 99.9 6.9E-22 1.5E-26 172.5 14.8 172 68-240 1-201 (367)
69 PRK05854 short chain dehydroge 99.9 1.3E-21 2.8E-26 168.3 16.1 174 63-238 11-215 (313)
70 PRK12823 benD 1,6-dihydroxycyc 99.9 8.9E-22 1.9E-26 164.6 14.7 160 63-237 5-192 (260)
71 PRK06197 short chain dehydroge 99.9 1.6E-21 3.6E-26 167.0 16.7 175 63-238 13-218 (306)
72 PRK07063 short chain dehydroge 99.9 6.9E-22 1.5E-26 165.4 13.8 161 64-237 5-195 (260)
73 PLN02253 xanthoxin dehydrogena 99.9 1E-21 2.2E-26 166.1 14.8 161 63-237 15-205 (280)
74 KOG1205 Predicted dehydrogenas 99.9 5.5E-22 1.2E-26 164.8 12.6 164 63-241 9-205 (282)
75 PRK08265 short chain dehydroge 99.9 7.6E-22 1.6E-26 165.4 13.6 161 64-237 4-187 (261)
76 PRK07523 gluconate 5-dehydroge 99.9 4.9E-22 1.1E-26 165.8 12.2 163 63-238 7-197 (255)
77 COG1086 Predicted nucleoside-d 99.9 1E-21 2.3E-26 173.9 14.8 160 63-238 247-424 (588)
78 PRK07825 short chain dehydroge 99.9 9.2E-22 2E-26 165.8 13.9 161 64-238 3-188 (273)
79 PRK07024 short chain dehydroge 99.9 8.6E-22 1.9E-26 164.6 13.3 159 66-237 2-188 (257)
80 PRK13394 3-hydroxybutyrate deh 99.9 7.5E-22 1.6E-26 165.0 12.8 161 64-237 5-194 (262)
81 PRK06128 oxidoreductase; Provi 99.9 1.3E-21 2.8E-26 167.3 14.2 163 63-238 52-243 (300)
82 PRK05866 short chain dehydroge 99.9 4.6E-21 1E-25 163.4 17.3 165 62-238 36-230 (293)
83 PRK06523 short chain dehydroge 99.9 1.8E-21 4E-26 162.7 14.6 158 63-238 6-190 (260)
84 PRK05876 short chain dehydroge 99.9 1.5E-21 3.3E-26 164.9 14.1 162 64-238 4-194 (275)
85 TIGR03325 BphB_TodD cis-2,3-di 99.9 4E-21 8.8E-26 161.0 16.5 162 64-238 3-192 (262)
86 PRK07478 short chain dehydroge 99.9 1.8E-21 3.9E-26 162.3 14.0 162 64-237 4-194 (254)
87 PRK06101 short chain dehydroge 99.9 4E-21 8.6E-26 159.1 15.7 160 66-239 1-180 (240)
88 PRK07453 protochlorophyllide o 99.9 3.1E-21 6.6E-26 166.5 15.7 170 65-235 5-229 (322)
89 TIGR01832 kduD 2-deoxy-D-gluco 99.9 1.7E-21 3.6E-26 161.8 13.5 162 64-238 3-191 (248)
90 PRK12429 3-hydroxybutyrate deh 99.9 1.7E-21 3.7E-26 162.4 13.3 162 64-238 2-191 (258)
91 PRK07806 short chain dehydroge 99.9 8.5E-21 1.8E-25 157.5 17.2 166 64-237 4-190 (248)
92 PRK07067 sorbitol dehydrogenas 99.9 2.1E-21 4.5E-26 162.2 13.6 161 64-237 4-190 (257)
93 PRK06138 short chain dehydroge 99.9 7.6E-21 1.6E-25 158.1 16.9 162 64-238 3-191 (252)
94 PRK06463 fabG 3-ketoacyl-(acyl 99.9 2.4E-21 5.1E-26 161.7 13.7 161 64-238 5-190 (255)
95 PLN00016 RNA-binding protein; 99.9 5E-21 1.1E-25 168.7 16.4 154 65-238 51-216 (378)
96 PRK06114 short chain dehydroge 99.9 3.8E-21 8.2E-26 160.5 14.4 165 63-238 5-198 (254)
97 PRK10538 malonic semialdehyde 99.9 3.2E-21 7E-26 160.3 13.9 158 67-237 1-184 (248)
98 PRK08589 short chain dehydroge 99.9 3.4E-21 7.4E-26 162.4 14.1 160 64-238 4-192 (272)
99 PRK08085 gluconate 5-dehydroge 99.9 2.8E-21 6E-26 161.2 13.4 163 63-238 6-196 (254)
100 PRK06398 aldose dehydrogenase; 99.9 4.1E-21 8.8E-26 160.7 14.4 153 64-237 4-180 (258)
101 PRK07890 short chain dehydroge 99.9 3.3E-21 7.2E-26 160.8 13.8 162 64-238 3-192 (258)
102 PRK07985 oxidoreductase; Provi 99.9 3.5E-21 7.6E-26 164.2 14.1 162 63-237 46-236 (294)
103 PRK09291 short chain dehydroge 99.9 9.5E-21 2.1E-25 158.0 16.3 159 66-237 2-182 (257)
104 PRK07231 fabG 3-ketoacyl-(acyl 99.9 6.4E-21 1.4E-25 158.3 15.2 162 64-238 3-192 (251)
105 TIGR03206 benzo_BadH 2-hydroxy 99.9 4.2E-21 9.1E-26 159.4 14.0 160 65-237 2-189 (250)
106 PRK06914 short chain dehydroge 99.9 2.6E-21 5.7E-26 163.5 12.8 159 65-237 2-190 (280)
107 PRK06200 2,3-dihydroxy-2,3-dih 99.9 9.4E-21 2E-25 158.8 16.1 162 64-238 4-193 (263)
108 PRK06194 hypothetical protein; 99.9 4.8E-21 1E-25 162.5 14.4 161 64-237 4-200 (287)
109 PRK07774 short chain dehydroge 99.9 6.1E-21 1.3E-25 158.5 14.7 159 64-238 4-193 (250)
110 PRK06935 2-deoxy-D-gluconate 3 99.9 4.6E-21 1E-25 160.2 13.9 162 63-237 12-200 (258)
111 PRK12825 fabG 3-ketoacyl-(acyl 99.9 9.1E-21 2E-25 156.8 15.5 163 64-239 4-195 (249)
112 PRK06500 short chain dehydroge 99.9 4.1E-21 8.9E-26 159.4 13.4 160 64-237 4-187 (249)
113 PRK08063 enoyl-(acyl carrier p 99.9 1.4E-20 3E-25 156.4 16.5 161 64-237 2-191 (250)
114 PRK08264 short chain dehydroge 99.9 8.8E-21 1.9E-25 156.5 15.1 157 64-237 4-183 (238)
115 PRK07454 short chain dehydroge 99.9 9.5E-21 2.1E-25 156.7 15.2 160 65-237 5-192 (241)
116 PRK12826 3-ketoacyl-(acyl-carr 99.9 7.4E-21 1.6E-25 157.8 14.3 163 64-238 4-194 (251)
117 PRK08213 gluconate 5-dehydroge 99.9 6.3E-21 1.4E-25 159.5 13.9 166 63-237 9-203 (259)
118 PRK08267 short chain dehydroge 99.9 5.2E-21 1.1E-25 160.1 13.3 160 66-238 1-187 (260)
119 PRK09186 flagellin modificatio 99.9 6.4E-21 1.4E-25 159.0 13.3 171 64-237 2-205 (256)
120 PRK12746 short chain dehydroge 99.9 2.3E-20 4.9E-25 155.5 16.6 162 64-238 4-198 (254)
121 PRK08277 D-mannonate oxidoredu 99.9 1.6E-20 3.4E-25 158.7 15.6 162 63-237 7-211 (278)
122 PRK06841 short chain dehydroge 99.9 8.7E-21 1.9E-25 158.1 13.6 163 63-238 12-199 (255)
123 PRK07775 short chain dehydroge 99.9 1.1E-20 2.3E-25 159.6 14.2 161 64-237 8-196 (274)
124 PLN02503 fatty acyl-CoA reduct 99.9 1.3E-20 2.8E-25 172.7 15.8 171 64-235 117-380 (605)
125 PRK06079 enoyl-(acyl carrier p 99.9 1.1E-20 2.5E-25 157.5 14.2 161 63-237 4-194 (252)
126 PRK07814 short chain dehydroge 99.9 1.2E-20 2.7E-25 158.2 14.4 161 64-237 8-196 (263)
127 PRK12747 short chain dehydroge 99.9 1.2E-20 2.6E-25 157.2 14.1 161 65-238 3-196 (252)
128 PRK06139 short chain dehydroge 99.9 1.4E-20 3E-25 162.8 15.0 162 64-238 5-195 (330)
129 PRK08628 short chain dehydroge 99.9 1.2E-20 2.7E-25 157.5 14.3 162 63-237 4-190 (258)
130 PRK05872 short chain dehydroge 99.9 9.5E-21 2.1E-25 161.6 13.8 163 63-238 6-194 (296)
131 PRK08643 acetoin reductase; Va 99.9 8.8E-21 1.9E-25 158.2 13.3 159 66-237 2-189 (256)
132 PRK05867 short chain dehydroge 99.9 1E-20 2.2E-25 157.7 13.5 164 64-238 7-199 (253)
133 PRK07035 short chain dehydroge 99.9 1E-20 2.3E-25 157.4 13.5 163 63-238 5-196 (252)
134 PRK05693 short chain dehydroge 99.9 1.9E-20 4.2E-25 157.9 15.2 157 66-238 1-181 (274)
135 PRK12936 3-ketoacyl-(acyl-carr 99.9 9.8E-21 2.1E-25 156.6 13.1 161 64-237 4-189 (245)
136 PRK07666 fabG 3-ketoacyl-(acyl 99.9 1.3E-20 2.8E-25 155.6 13.7 162 64-238 5-194 (239)
137 PRK08642 fabG 3-ketoacyl-(acyl 99.9 1E-20 2.2E-25 157.4 13.1 161 64-237 3-196 (253)
138 PRK09242 tropinone reductase; 99.9 1.1E-20 2.5E-25 157.7 13.4 163 63-238 6-198 (257)
139 PRK07062 short chain dehydroge 99.8 1.2E-20 2.6E-25 158.3 13.5 162 63-237 5-196 (265)
140 PRK08993 2-deoxy-D-gluconate 3 99.8 1.2E-20 2.7E-25 157.3 13.4 163 63-238 7-196 (253)
141 PRK07097 gluconate 5-dehydroge 99.8 1.6E-20 3.5E-25 157.6 14.1 163 63-238 7-197 (265)
142 PRK06113 7-alpha-hydroxysteroi 99.8 1.9E-20 4.2E-25 156.2 14.5 163 63-238 8-197 (255)
143 PRK05875 short chain dehydroge 99.8 1.1E-20 2.5E-25 159.3 13.2 162 64-238 5-197 (276)
144 PRK07577 short chain dehydroge 99.8 2.8E-20 6E-25 153.0 15.0 151 65-237 2-176 (234)
145 PRK05865 hypothetical protein; 99.8 2.7E-20 5.8E-25 175.8 16.7 132 67-237 1-132 (854)
146 PRK07856 short chain dehydroge 99.8 1.4E-20 3E-25 156.8 13.3 158 63-238 3-185 (252)
147 TIGR01963 PHB_DH 3-hydroxybuty 99.8 1.3E-20 2.8E-25 156.9 13.0 158 66-237 1-187 (255)
148 PRK12745 3-ketoacyl-(acyl-carr 99.8 1.9E-20 4E-25 156.1 13.9 160 66-238 2-198 (256)
149 PRK06181 short chain dehydroge 99.8 6.6E-20 1.4E-24 153.6 17.3 159 66-237 1-187 (263)
150 PRK12742 oxidoreductase; Provi 99.8 1.3E-20 2.9E-25 155.3 12.8 161 64-238 4-184 (237)
151 PRK06124 gluconate 5-dehydroge 99.8 2.3E-20 5E-25 155.7 14.4 163 62-237 7-197 (256)
152 PRK06701 short chain dehydroge 99.8 2.4E-20 5.3E-25 158.7 14.7 163 63-238 43-233 (290)
153 PRK07023 short chain dehydroge 99.8 2.2E-20 4.8E-25 154.7 14.1 157 66-237 1-186 (243)
154 PRK06172 short chain dehydroge 99.8 1.7E-20 3.6E-25 156.3 13.4 162 64-238 5-195 (253)
155 PRK06171 sorbitol-6-phosphate 99.8 1.7E-20 3.7E-25 157.4 13.5 153 63-234 6-192 (266)
156 PRK07109 short chain dehydroge 99.8 1.9E-20 4.2E-25 162.3 14.2 161 64-237 6-196 (334)
157 PRK08251 short chain dehydroge 99.8 4E-20 8.7E-25 153.5 15.6 161 66-238 2-192 (248)
158 PRK07904 short chain dehydroge 99.8 5.4E-20 1.2E-24 153.6 16.4 161 65-238 7-197 (253)
159 PLN02778 3,5-epimerase/4-reduc 99.8 2.1E-20 4.7E-25 159.6 14.1 147 66-236 9-169 (298)
160 PRK12827 short chain dehydroge 99.8 5.7E-20 1.2E-24 152.3 16.1 162 64-238 4-198 (249)
161 PRK05653 fabG 3-ketoacyl-(acyl 99.8 3.4E-20 7.3E-25 153.2 14.7 164 63-239 2-193 (246)
162 KOG0747 Putative NAD+-dependen 99.8 1.2E-20 2.6E-25 153.6 11.5 173 67-240 7-194 (331)
163 PRK08220 2,3-dihydroxybenzoate 99.8 4.2E-20 9.1E-25 153.7 15.1 156 64-238 6-186 (252)
164 PRK12828 short chain dehydroge 99.8 7.8E-20 1.7E-24 150.5 16.5 161 64-237 5-191 (239)
165 PRK07060 short chain dehydroge 99.8 3.1E-20 6.7E-25 153.7 14.2 161 63-238 6-188 (245)
166 PRK06949 short chain dehydroge 99.8 6.1E-20 1.3E-24 153.2 16.0 163 63-238 6-204 (258)
167 PRK12829 short chain dehydroge 99.8 2.5E-20 5.4E-25 156.0 13.4 162 64-238 9-198 (264)
168 PRK07102 short chain dehydroge 99.8 4.9E-20 1.1E-24 152.6 14.9 159 66-237 1-185 (243)
169 PRK09135 pteridine reductase; 99.8 8.2E-20 1.8E-24 151.4 16.2 161 65-238 5-193 (249)
170 PRK07326 short chain dehydroge 99.8 6.7E-20 1.5E-24 151.1 15.2 162 64-238 4-191 (237)
171 PRK06057 short chain dehydroge 99.8 6.1E-20 1.3E-24 153.2 15.1 160 64-238 5-192 (255)
172 PRK08415 enoyl-(acyl carrier p 99.8 3.9E-20 8.5E-25 156.2 14.0 160 64-237 3-194 (274)
173 PRK05650 short chain dehydroge 99.8 1.4E-19 3.1E-24 152.3 17.0 159 67-238 1-187 (270)
174 PRK12743 oxidoreductase; Provi 99.8 3.6E-20 7.8E-25 154.7 12.9 160 66-238 2-191 (256)
175 PRK12384 sorbitol-6-phosphate 99.8 5.1E-20 1.1E-24 153.9 13.8 158 66-237 2-191 (259)
176 PRK06484 short chain dehydroge 99.8 2.9E-20 6.2E-25 170.3 13.3 163 63-238 266-452 (520)
177 PRK08416 7-alpha-hydroxysteroi 99.8 2.9E-20 6.2E-25 155.7 12.2 162 63-237 5-202 (260)
178 PRK12938 acetyacetyl-CoA reduc 99.8 5.5E-20 1.2E-24 152.5 13.8 161 65-238 2-191 (246)
179 PRK08278 short chain dehydroge 99.8 6.2E-20 1.3E-24 154.8 14.3 162 64-236 4-201 (273)
180 PRK09072 short chain dehydroge 99.8 1E-19 2.2E-24 152.5 15.2 161 64-237 3-189 (263)
181 PRK08226 short chain dehydroge 99.8 5.7E-20 1.2E-24 153.9 13.5 162 64-237 4-192 (263)
182 PRK12937 short chain dehydroge 99.8 7.6E-20 1.7E-24 151.4 14.0 161 64-237 3-190 (245)
183 PRK12824 acetoacetyl-CoA reduc 99.8 8.3E-20 1.8E-24 151.1 14.2 160 66-238 2-190 (245)
184 PRK06550 fabG 3-ketoacyl-(acyl 99.8 5.2E-20 1.1E-24 151.6 12.9 155 64-238 3-178 (235)
185 PLN02780 ketoreductase/ oxidor 99.8 5.8E-20 1.3E-24 158.4 13.6 164 65-238 52-246 (320)
186 PRK12935 acetoacetyl-CoA reduc 99.8 8.9E-20 1.9E-24 151.3 14.3 161 64-237 4-193 (247)
187 PRK07533 enoyl-(acyl carrier p 99.8 6.9E-20 1.5E-24 153.3 13.6 163 62-238 6-200 (258)
188 PRK12939 short chain dehydroge 99.8 6.2E-20 1.3E-24 152.3 13.2 162 64-238 5-194 (250)
189 PRK07677 short chain dehydroge 99.8 5.1E-20 1.1E-24 153.4 12.7 158 66-236 1-188 (252)
190 KOG2865 NADH:ubiquinone oxidor 99.8 7.6E-20 1.6E-24 149.1 13.0 159 63-237 58-218 (391)
191 PRK06505 enoyl-(acyl carrier p 99.8 8.1E-20 1.8E-24 154.0 13.6 160 64-237 5-196 (271)
192 PRK06125 short chain dehydroge 99.8 1.2E-19 2.5E-24 151.9 14.4 161 64-237 5-190 (259)
193 PRK05855 short chain dehydroge 99.8 6.9E-20 1.5E-24 169.4 14.2 164 62-238 311-503 (582)
194 PRK07576 short chain dehydroge 99.8 9.2E-20 2E-24 153.1 13.6 159 63-235 6-192 (264)
195 PRK05565 fabG 3-ketoacyl-(acyl 99.8 2.2E-19 4.7E-24 148.7 15.3 160 64-237 3-192 (247)
196 PRK06483 dihydromonapterin red 99.8 8.2E-20 1.8E-24 150.7 12.7 156 66-236 2-183 (236)
197 PRK09134 short chain dehydroge 99.8 1.7E-19 3.7E-24 150.8 14.7 160 65-237 8-195 (258)
198 PRK05557 fabG 3-ketoacyl-(acyl 99.8 2.3E-19 5E-24 148.4 15.4 160 64-237 3-192 (248)
199 PRK08936 glucose-1-dehydrogena 99.8 1.6E-19 3.5E-24 151.1 14.5 163 63-238 4-196 (261)
200 PRK12748 3-ketoacyl-(acyl-carr 99.8 4.5E-19 9.6E-24 148.1 16.7 161 64-237 3-204 (256)
201 PRK07201 short chain dehydroge 99.8 1.7E-19 3.7E-24 169.5 15.8 164 63-239 368-561 (657)
202 PRK07370 enoyl-(acyl carrier p 99.8 1.3E-19 2.8E-24 151.7 13.1 160 64-237 4-198 (258)
203 PRK08340 glucose-1-dehydrogena 99.8 1.5E-19 3.3E-24 151.2 13.5 159 67-238 1-189 (259)
204 PRK08177 short chain dehydroge 99.8 2.4E-19 5.1E-24 147.0 14.2 161 66-238 1-185 (225)
205 PRK07074 short chain dehydroge 99.8 5.8E-19 1.3E-23 147.3 16.8 159 66-238 2-186 (257)
206 PRK08703 short chain dehydroge 99.8 5.4E-19 1.2E-23 146.0 16.3 163 64-238 4-199 (239)
207 PRK07791 short chain dehydroge 99.8 1.8E-19 3.9E-24 153.1 13.3 160 64-237 4-206 (286)
208 PRK06953 short chain dehydroge 99.8 2.3E-19 5E-24 146.7 13.4 160 66-239 1-183 (222)
209 PRK07831 short chain dehydroge 99.8 2E-19 4.3E-24 150.7 13.3 162 64-238 15-208 (262)
210 PRK05884 short chain dehydroge 99.8 1.9E-19 4.2E-24 147.5 12.9 152 67-237 1-177 (223)
211 PRK08303 short chain dehydroge 99.8 2.6E-19 5.6E-24 153.4 14.2 165 63-237 5-212 (305)
212 PRK08594 enoyl-(acyl carrier p 99.8 2.2E-19 4.9E-24 150.2 13.5 161 64-237 5-198 (257)
213 PRK08219 short chain dehydroge 99.8 3.8E-19 8.2E-24 145.5 14.5 157 65-237 2-178 (227)
214 PRK06123 short chain dehydroge 99.8 2.4E-19 5.3E-24 148.7 13.5 160 66-238 2-195 (248)
215 TIGR01777 yfcH conserved hypot 99.8 3.6E-19 7.7E-24 151.0 14.7 158 69-237 1-169 (292)
216 PRK06924 short chain dehydroge 99.8 1.8E-19 3.9E-24 149.8 12.5 159 66-237 1-193 (251)
217 PRK09730 putative NAD(P)-bindi 99.8 3.7E-19 8.1E-24 147.3 14.2 161 66-238 1-194 (247)
218 PRK12859 3-ketoacyl-(acyl-carr 99.8 2.9E-19 6.3E-24 149.3 13.6 161 64-237 4-205 (256)
219 PRK08159 enoyl-(acyl carrier p 99.8 2.3E-19 5E-24 151.3 13.1 160 64-237 8-199 (272)
220 PRK08945 putative oxoacyl-(acy 99.8 2.6E-19 5.6E-24 148.7 13.1 161 64-237 10-202 (247)
221 PRK07984 enoyl-(acyl carrier p 99.8 3.4E-19 7.3E-24 149.5 13.9 160 64-237 4-196 (262)
222 PRK06940 short chain dehydroge 99.8 3.8E-19 8.3E-24 150.2 14.4 170 66-238 2-207 (275)
223 KOG1200 Mitochondrial/plastidi 99.8 1.6E-19 3.5E-24 139.5 10.9 162 63-238 11-202 (256)
224 PRK07041 short chain dehydroge 99.8 2.8E-19 6.1E-24 146.8 12.9 155 70-237 1-172 (230)
225 PRK12744 short chain dehydroge 99.8 2.3E-19 4.9E-24 149.9 12.5 159 64-237 6-196 (257)
226 PRK08017 oxidoreductase; Provi 99.8 5.8E-19 1.3E-23 147.1 14.9 156 66-237 2-183 (256)
227 PRK06484 short chain dehydroge 99.8 2.9E-19 6.3E-24 163.7 13.9 161 65-238 4-192 (520)
228 TIGR01289 LPOR light-dependent 99.8 6.5E-19 1.4E-23 151.6 15.2 173 65-238 2-229 (314)
229 PRK07792 fabG 3-ketoacyl-(acyl 99.8 4E-19 8.6E-24 152.4 13.7 161 62-236 8-203 (306)
230 PRK08217 fabG 3-ketoacyl-(acyl 99.8 7.2E-19 1.6E-23 146.1 14.8 161 64-238 3-201 (253)
231 PRK07069 short chain dehydroge 99.8 4.9E-19 1.1E-23 147.1 13.7 158 68-238 1-191 (251)
232 PRK06077 fabG 3-ketoacyl-(acyl 99.8 6.7E-19 1.4E-23 146.3 14.5 161 64-237 4-190 (252)
233 PRK08690 enoyl-(acyl carrier p 99.8 4E-19 8.7E-24 149.0 13.2 159 64-237 4-197 (261)
234 PRK06603 enoyl-(acyl carrier p 99.8 3.7E-19 8E-24 149.1 12.8 161 63-237 5-197 (260)
235 PRK07889 enoyl-(acyl carrier p 99.8 4.8E-19 1E-23 148.1 13.4 160 64-237 5-195 (256)
236 KOG0725 Reductases with broad 99.8 5.8E-19 1.3E-23 148.1 13.8 164 62-237 4-201 (270)
237 TIGR01829 AcAcCoA_reduct aceto 99.8 5.5E-19 1.2E-23 145.9 13.6 159 67-238 1-188 (242)
238 PRK06947 glucose-1-dehydrogena 99.8 2.9E-19 6.3E-24 148.3 11.9 160 66-238 2-195 (248)
239 KOG1208 Dehydrogenases with di 99.8 1.7E-18 3.7E-23 147.6 16.7 174 62-237 31-233 (314)
240 PRK07832 short chain dehydroge 99.8 5.3E-19 1.2E-23 149.0 13.5 158 67-237 1-188 (272)
241 KOG1201 Hydroxysteroid 17-beta 99.8 3.6E-19 7.8E-24 147.0 11.8 165 62-240 34-229 (300)
242 TIGR02415 23BDH acetoin reduct 99.8 5.1E-19 1.1E-23 147.3 12.8 158 67-237 1-187 (254)
243 PRK08862 short chain dehydroge 99.8 1.4E-18 2.9E-23 142.9 15.1 158 64-237 3-191 (227)
244 PRK06198 short chain dehydroge 99.8 6.3E-19 1.4E-23 147.3 13.2 161 64-237 4-194 (260)
245 PRK06997 enoyl-(acyl carrier p 99.8 5.5E-19 1.2E-23 148.1 12.4 160 64-237 4-196 (260)
246 PRK12367 short chain dehydroge 99.8 1.4E-18 3E-23 144.3 14.1 158 63-237 11-190 (245)
247 TIGR01831 fabG_rel 3-oxoacyl-( 99.8 8.5E-19 1.9E-23 144.7 12.3 157 69-238 1-187 (239)
248 PRK05786 fabG 3-ketoacyl-(acyl 99.8 2.6E-18 5.5E-23 141.7 15.0 162 64-237 3-187 (238)
249 PRK08324 short chain dehydroge 99.8 1.6E-18 3.5E-23 163.3 14.7 159 63-234 419-605 (681)
250 TIGR02632 RhaD_aldol-ADH rhamn 99.8 3.2E-18 6.9E-23 160.7 15.9 161 62-235 410-601 (676)
251 PRK05599 hypothetical protein; 99.8 4.7E-18 1E-22 141.2 15.0 158 67-238 1-188 (246)
252 PLN02260 probable rhamnose bio 99.8 2.1E-18 4.5E-23 162.5 14.3 148 65-236 379-540 (668)
253 PRK12320 hypothetical protein; 99.8 5.8E-18 1.3E-22 157.1 16.3 137 67-238 1-137 (699)
254 TIGR02685 pter_reduc_Leis pter 99.8 3.9E-18 8.5E-23 143.3 13.5 156 67-236 2-209 (267)
255 KOG1203 Predicted dehydrogenas 99.8 3.1E-17 6.6E-22 142.3 19.1 174 60-239 73-252 (411)
256 TIGR01830 3oxo_ACP_reduc 3-oxo 99.8 4.6E-18 1E-22 140.0 13.2 155 69-237 1-185 (239)
257 TIGR01500 sepiapter_red sepiap 99.8 1.8E-18 3.8E-23 144.6 10.7 157 68-237 2-201 (256)
258 PLN02730 enoyl-[acyl-carrier-p 99.8 2.6E-18 5.6E-23 146.6 11.6 165 62-238 5-232 (303)
259 PRK08261 fabG 3-ketoacyl-(acyl 99.8 3.9E-18 8.5E-23 153.6 13.4 160 63-237 207-393 (450)
260 PRK07424 bifunctional sterol d 99.8 1.4E-17 3E-22 146.8 15.7 159 63-237 175-350 (406)
261 PLN00015 protochlorophyllide r 99.8 9.3E-18 2E-22 144.0 14.3 168 70-238 1-225 (308)
262 PRK07578 short chain dehydroge 99.8 7.6E-18 1.7E-22 135.4 12.8 143 67-237 1-161 (199)
263 TIGR03443 alpha_am_amid L-amin 99.8 8.3E-18 1.8E-22 169.8 15.4 174 66-240 971-1186(1389)
264 TIGR03649 ergot_EASG ergot alk 99.8 1.2E-17 2.5E-22 141.7 13.9 134 68-236 1-141 (285)
265 KOG4169 15-hydroxyprostaglandi 99.8 4.6E-18 9.9E-23 134.7 10.4 161 64-237 3-189 (261)
266 KOG1611 Predicted short chain- 99.8 7.1E-18 1.5E-22 133.5 11.5 173 66-248 3-219 (249)
267 KOG1610 Corticosteroid 11-beta 99.8 9.9E-18 2.2E-22 139.1 12.6 161 64-238 27-216 (322)
268 COG3967 DltE Short-chain dehyd 99.7 2.3E-17 5E-22 128.8 11.7 160 63-236 2-188 (245)
269 KOG1209 1-Acyl dihydroxyaceton 99.7 1.1E-17 2.4E-22 131.2 9.9 160 65-239 6-191 (289)
270 smart00822 PKS_KR This enzymat 99.7 3.3E-17 7.2E-22 128.1 12.7 155 67-234 1-179 (180)
271 PF05368 NmrA: NmrA-like famil 99.7 3.5E-17 7.5E-22 134.9 13.4 146 69-235 1-147 (233)
272 PF00106 adh_short: short chai 99.7 1E-17 2.2E-22 130.7 9.4 140 67-219 1-160 (167)
273 PRK09009 C factor cell-cell si 99.7 6.2E-17 1.4E-21 133.3 13.5 156 67-238 1-188 (235)
274 COG2910 Putative NADH-flavin r 99.7 2.5E-16 5.4E-21 120.9 15.0 168 67-248 1-173 (211)
275 KOG1207 Diacetyl reductase/L-x 99.7 1.1E-17 2.4E-22 127.2 7.3 165 63-240 4-190 (245)
276 COG1028 FabG Dehydrogenases wi 99.7 1.8E-16 4E-21 131.7 14.2 162 64-238 3-194 (251)
277 COG1089 Gmd GDP-D-mannose dehy 99.7 4.5E-16 9.8E-21 127.2 14.5 159 66-226 2-178 (345)
278 COG1090 Predicted nucleoside-d 99.7 1.9E-15 4.2E-20 123.4 13.4 158 69-238 1-168 (297)
279 KOG1210 Predicted 3-ketosphing 99.7 2.6E-15 5.5E-20 124.6 13.8 171 66-249 33-234 (331)
280 KOG1014 17 beta-hydroxysteroid 99.7 3.4E-15 7.4E-20 124.0 14.2 162 65-238 48-238 (312)
281 PRK06300 enoyl-(acyl carrier p 99.7 2.1E-15 4.6E-20 128.6 13.3 164 63-238 5-231 (299)
282 PF13561 adh_short_C2: Enoyl-( 99.6 4.1E-16 8.9E-21 129.1 7.3 151 73-237 1-185 (241)
283 COG0702 Predicted nucleoside-d 99.6 1.2E-14 2.5E-19 122.2 15.7 147 67-236 1-147 (275)
284 PRK12428 3-alpha-hydroxysteroi 99.6 1.5E-15 3.3E-20 125.8 9.7 148 82-238 1-176 (241)
285 KOG1431 GDP-L-fucose synthetas 99.6 2.8E-15 6.1E-20 118.7 10.5 155 66-238 1-171 (315)
286 KOG1221 Acyl-CoA reductase [Li 99.6 6.2E-15 1.3E-19 130.0 12.9 172 63-235 9-238 (467)
287 TIGR02813 omega_3_PfaA polyket 99.6 6.4E-15 1.4E-19 152.5 13.9 161 65-238 1996-2225(2582)
288 KOG1199 Short-chain alcohol de 99.6 1.1E-15 2.4E-20 116.3 3.6 162 64-238 7-205 (260)
289 KOG4039 Serine/threonine kinas 99.6 6.4E-14 1.4E-18 107.0 11.8 157 62-238 14-174 (238)
290 PF08659 KR: KR domain; Inter 99.5 1.8E-13 3.8E-18 108.6 13.7 152 68-233 2-178 (181)
291 KOG2774 NAD dependent epimeras 99.4 3.8E-13 8.2E-18 107.5 8.8 165 65-235 43-216 (366)
292 PRK06720 hypothetical protein; 99.4 2.1E-12 4.6E-17 101.1 12.0 121 63-184 13-159 (169)
293 KOG1204 Predicted dehydrogenas 99.4 3.8E-13 8.3E-18 106.9 5.8 161 65-238 5-195 (253)
294 KOG4288 Predicted oxidoreducta 99.4 7.3E-13 1.6E-17 105.3 6.0 163 60-240 46-209 (283)
295 KOG1372 GDP-mannose 4,6 dehydr 99.3 1.6E-11 3.5E-16 98.8 11.1 148 66-215 28-192 (376)
296 KOG1478 3-keto sterol reductas 99.3 8E-12 1.7E-16 100.9 9.2 169 65-237 2-234 (341)
297 PRK08309 short chain dehydroge 99.2 7.2E-11 1.6E-15 93.1 9.9 99 67-181 1-111 (177)
298 PRK13656 trans-2-enoyl-CoA red 99.1 1.5E-09 3.2E-14 94.3 14.8 81 65-147 40-143 (398)
299 COG1748 LYS9 Saccharopine dehy 99.1 1.3E-09 2.8E-14 95.0 11.0 98 66-181 1-99 (389)
300 PTZ00325 malate dehydrogenase; 99.1 1.4E-09 2.9E-14 93.4 10.3 118 64-185 6-128 (321)
301 PLN00106 malate dehydrogenase 98.9 1.2E-08 2.5E-13 87.8 10.1 115 66-183 18-136 (323)
302 COG0623 FabI Enoyl-[acyl-carri 98.9 4.1E-08 9E-13 78.6 12.2 159 63-235 3-193 (259)
303 PRK09620 hypothetical protein; 98.8 1.4E-08 3E-13 83.3 8.0 81 65-147 2-99 (229)
304 PRK06732 phosphopantothenate-- 98.8 2.7E-08 5.8E-13 81.8 9.2 75 68-147 17-93 (229)
305 PF03435 Saccharop_dh: Sacchar 98.8 4.6E-08 1E-12 86.6 11.2 93 69-179 1-96 (386)
306 cd01336 MDH_cytoplasmic_cytoso 98.8 3.4E-08 7.3E-13 85.3 9.3 114 67-182 3-129 (325)
307 cd01078 NAD_bind_H4MPT_DH NADP 98.7 7.2E-08 1.6E-12 77.2 9.0 81 63-145 25-107 (194)
308 PRK05086 malate dehydrogenase; 98.7 2E-07 4.3E-12 80.1 10.3 113 67-183 1-119 (312)
309 PRK05579 bifunctional phosphop 98.7 1.1E-07 2.3E-12 84.1 8.8 77 62-147 184-279 (399)
310 TIGR00715 precor6x_red precorr 98.6 6E-07 1.3E-11 74.8 10.0 74 67-145 1-75 (256)
311 PRK12548 shikimate 5-dehydroge 98.4 9.5E-07 2.1E-11 75.2 8.8 79 64-145 124-209 (289)
312 KOG2733 Uncharacterized membra 98.4 6.6E-07 1.4E-11 76.1 7.3 79 67-147 6-95 (423)
313 cd00704 MDH Malate dehydrogena 98.3 4.7E-06 1E-10 71.9 10.7 104 68-181 2-126 (323)
314 PRK14982 acyl-ACP reductase; P 98.3 1.5E-06 3.4E-11 74.9 7.7 74 63-147 152-227 (340)
315 TIGR00521 coaBC_dfp phosphopan 98.3 3.5E-06 7.6E-11 74.3 9.8 103 62-173 181-313 (390)
316 TIGR01758 MDH_euk_cyt malate d 98.3 5.7E-06 1.2E-10 71.4 9.9 104 68-181 1-125 (324)
317 COG0569 TrkA K+ transport syst 98.3 1.2E-05 2.6E-10 65.9 11.3 74 67-144 1-75 (225)
318 TIGR02114 coaB_strep phosphopa 98.3 1.8E-06 3.9E-11 70.8 6.0 69 68-147 16-92 (227)
319 PF01488 Shikimate_DH: Shikima 98.2 3.9E-06 8.5E-11 63.2 6.2 76 63-146 9-86 (135)
320 cd01338 MDH_choloroplast_like 98.1 1.1E-05 2.4E-10 69.6 8.3 157 67-239 3-187 (322)
321 PF00056 Ldh_1_N: lactate/mala 98.1 1.6E-05 3.6E-10 60.3 8.2 106 67-181 1-118 (141)
322 PF04127 DFP: DNA / pantothena 98.1 2E-05 4.3E-10 62.5 7.9 76 65-147 2-94 (185)
323 PRK12475 thiamine/molybdopteri 98.0 8.7E-05 1.9E-09 64.5 12.2 108 62-187 20-154 (338)
324 PLN02819 lysine-ketoglutarate 98.0 0.00011 2.4E-09 71.9 13.8 77 65-145 568-658 (1042)
325 PRK07688 thiamine/molybdopteri 98.0 0.00014 3.1E-09 63.2 12.6 108 62-187 20-154 (339)
326 PLN02968 Probable N-acetyl-gam 98.0 3.6E-05 7.7E-10 67.9 8.8 101 65-186 37-139 (381)
327 PRK14106 murD UDP-N-acetylmura 98.0 5.1E-05 1.1E-09 68.6 10.0 75 64-146 3-79 (450)
328 COG3268 Uncharacterized conser 98.0 1.9E-05 4.1E-10 66.8 6.2 78 66-147 6-83 (382)
329 TIGR02356 adenyl_thiF thiazole 97.9 0.0002 4.4E-09 57.7 11.4 107 62-186 17-148 (202)
330 PRK14874 aspartate-semialdehyd 97.9 0.00015 3.2E-09 63.0 11.0 93 66-183 1-96 (334)
331 cd05294 LDH-like_MDH_nadp A la 97.9 7.5E-05 1.6E-09 64.2 8.3 110 67-182 1-122 (309)
332 PRK09496 trkA potassium transp 97.8 0.0002 4.3E-09 64.7 11.5 73 67-144 1-74 (453)
333 cd05291 HicDH_like L-2-hydroxy 97.8 4.9E-05 1.1E-09 65.3 6.9 105 67-181 1-117 (306)
334 PF00899 ThiF: ThiF family; I 97.8 0.00069 1.5E-08 50.9 11.5 103 66-186 2-129 (135)
335 PRK00066 ldh L-lactate dehydro 97.8 0.00011 2.5E-09 63.2 7.9 107 65-181 5-122 (315)
336 PF01118 Semialdhyde_dh: Semia 97.7 0.0011 2.4E-08 48.8 11.8 94 68-183 1-99 (121)
337 TIGR02355 moeB molybdopterin s 97.7 0.00076 1.7E-08 55.8 11.9 104 63-184 21-149 (240)
338 PF02254 TrkA_N: TrkA-N domain 97.7 0.00079 1.7E-08 48.9 10.8 92 69-179 1-94 (116)
339 PRK05442 malate dehydrogenase; 97.7 0.0003 6.6E-09 60.8 9.7 107 66-181 4-130 (326)
340 PRK09496 trkA potassium transp 97.7 0.00056 1.2E-08 61.8 11.9 102 64-182 229-331 (453)
341 PRK00436 argC N-acetyl-gamma-g 97.7 0.00028 6E-09 61.6 9.4 99 66-184 2-102 (343)
342 KOG1202 Animal-type fatty acid 97.7 6.7E-05 1.5E-09 72.6 5.5 155 66-233 1768-1947(2376)
343 cd01337 MDH_glyoxysomal_mitoch 97.7 0.00027 5.8E-09 60.7 8.8 109 67-181 1-117 (310)
344 cd01065 NAD_bind_Shikimate_DH 97.6 0.00018 3.9E-09 55.1 6.8 75 64-146 17-92 (155)
345 cd00757 ThiF_MoeB_HesA_family 97.6 0.0009 2E-08 55.0 11.3 104 63-184 18-146 (228)
346 PRK08762 molybdopterin biosynt 97.6 0.00089 1.9E-08 59.2 11.8 104 63-184 132-260 (376)
347 TIGR01759 MalateDH-SF1 malate 97.6 0.00029 6.3E-09 60.8 8.3 107 66-181 3-129 (323)
348 PRK00258 aroE shikimate 5-dehy 97.6 0.00019 4.2E-09 60.7 7.1 75 63-145 120-195 (278)
349 PRK05690 molybdopterin biosynt 97.6 0.0014 3E-08 54.5 11.9 104 62-183 28-156 (245)
350 cd01485 E1-1_like Ubiquitin ac 97.6 0.0017 3.7E-08 52.1 11.6 110 63-188 16-152 (198)
351 TIGR01772 MDH_euk_gproteo mala 97.6 0.00067 1.5E-08 58.3 9.7 110 68-181 1-116 (312)
352 PRK08644 thiamine biosynthesis 97.5 0.002 4.2E-08 52.4 11.8 106 63-186 25-155 (212)
353 PRK08223 hypothetical protein; 97.5 0.0014 3.1E-08 55.3 11.2 106 62-183 23-153 (287)
354 TIGR01850 argC N-acetyl-gamma- 97.5 0.00051 1.1E-08 60.0 8.8 99 67-184 1-102 (346)
355 PRK08328 hypothetical protein; 97.5 0.0017 3.6E-08 53.5 11.1 107 63-187 24-156 (231)
356 PRK15116 sulfur acceptor prote 97.5 0.0026 5.6E-08 53.4 12.3 105 63-183 27-155 (268)
357 PRK08664 aspartate-semialdehyd 97.5 0.0015 3.2E-08 57.3 11.3 38 65-102 2-40 (349)
358 PRK05597 molybdopterin biosynt 97.5 0.0018 3.9E-08 56.8 11.8 105 62-184 24-153 (355)
359 PRK05671 aspartate-semialdehyd 97.5 0.00098 2.1E-08 57.9 10.0 94 66-184 4-100 (336)
360 COG0039 Mdh Malate/lactate deh 97.5 0.00056 1.2E-08 58.3 7.8 112 67-182 1-118 (313)
361 cd01483 E1_enzyme_family Super 97.5 0.0046 1E-07 46.8 12.2 99 68-184 1-124 (143)
362 KOG4022 Dihydropteridine reduc 97.4 0.01 2.3E-07 45.5 13.7 154 66-238 3-183 (236)
363 TIGR01470 cysG_Nterm siroheme 97.4 0.0026 5.7E-08 51.3 11.3 73 63-144 6-78 (205)
364 TIGR00507 aroE shikimate 5-deh 97.4 0.00041 9E-09 58.5 6.8 72 65-146 116-189 (270)
365 TIGR02853 spore_dpaA dipicolin 97.4 0.00085 1.8E-08 57.1 8.7 71 63-144 148-218 (287)
366 cd08295 double_bond_reductase_ 97.4 0.0021 4.5E-08 55.8 11.0 100 65-183 151-253 (338)
367 PRK02472 murD UDP-N-acetylmura 97.4 0.0011 2.4E-08 59.8 9.6 75 64-147 3-80 (447)
368 KOG1494 NAD-dependent malate d 97.4 0.00071 1.5E-08 56.2 7.4 112 65-181 27-145 (345)
369 cd01489 Uba2_SUMO Ubiquitin ac 97.4 0.0029 6.4E-08 54.2 11.5 102 68-186 1-127 (312)
370 TIGR02825 B4_12hDH leukotriene 97.4 0.0023 4.9E-08 55.2 11.0 99 65-183 138-239 (325)
371 TIGR01296 asd_B aspartate-semi 97.4 0.0015 3.2E-08 57.0 9.8 68 68-145 1-71 (339)
372 COG4982 3-oxoacyl-[acyl-carrie 97.4 0.005 1.1E-07 56.5 13.0 161 64-237 394-604 (866)
373 PRK04148 hypothetical protein; 97.4 0.0032 6.9E-08 47.0 10.0 94 65-180 16-109 (134)
374 PF03446 NAD_binding_2: NAD bi 97.4 0.0036 7.8E-08 48.6 10.8 66 66-144 1-66 (163)
375 PRK07878 molybdopterin biosynt 97.3 0.0031 6.7E-08 56.1 11.6 108 62-187 38-170 (392)
376 PTZ00117 malate dehydrogenase; 97.3 0.001 2.3E-08 57.4 8.4 113 65-181 4-122 (319)
377 cd00755 YgdL_like Family of ac 97.3 0.0042 9.1E-08 51.1 11.5 104 63-183 8-136 (231)
378 cd00650 LDH_MDH_like NAD-depen 97.3 0.00063 1.4E-08 57.1 6.4 110 69-181 1-119 (263)
379 PLN03154 putative allyl alcoho 97.3 0.0029 6.4E-08 55.2 10.9 100 65-183 158-260 (348)
380 cd01080 NAD_bind_m-THF_DH_Cycl 97.3 0.0012 2.6E-08 51.5 7.5 57 63-145 41-97 (168)
381 TIGR01809 Shik-DH-AROM shikima 97.3 0.00091 2E-08 56.8 7.4 78 64-146 123-201 (282)
382 PRK12549 shikimate 5-dehydroge 97.3 0.00054 1.2E-08 58.2 6.0 72 64-143 125-200 (284)
383 cd01484 E1-2_like Ubiquitin ac 97.3 0.0045 9.7E-08 51.0 11.2 100 68-184 1-126 (234)
384 PRK05600 thiamine biosynthesis 97.3 0.0036 7.9E-08 55.1 11.3 104 62-183 37-165 (370)
385 PF01113 DapB_N: Dihydrodipico 97.3 0.0026 5.7E-08 47.0 8.9 93 67-179 1-96 (124)
386 PRK06223 malate dehydrogenase; 97.3 0.0013 2.7E-08 56.6 8.2 112 66-181 2-119 (307)
387 cd08259 Zn_ADH5 Alcohol dehydr 97.3 0.0032 6.9E-08 54.0 10.8 97 65-183 162-258 (332)
388 PRK08057 cobalt-precorrin-6x r 97.3 0.0058 1.3E-07 50.8 11.7 73 66-145 2-75 (248)
389 COG0604 Qor NADPH:quinone redu 97.3 0.0011 2.3E-08 57.6 7.6 99 66-184 143-244 (326)
390 TIGR01915 npdG NADPH-dependent 97.3 0.00041 9E-09 56.6 4.8 39 67-105 1-39 (219)
391 PLN00112 malate dehydrogenase 97.2 0.00074 1.6E-08 60.5 6.5 107 66-181 100-226 (444)
392 TIGR02354 thiF_fam2 thiamine b 97.2 0.01 2.2E-07 47.7 12.5 76 63-142 18-117 (200)
393 KOG3019 Predicted nucleoside-d 97.2 0.00072 1.6E-08 54.6 5.6 160 65-238 11-187 (315)
394 TIGR00518 alaDH alanine dehydr 97.2 0.0019 4.1E-08 57.0 8.8 75 65-145 166-240 (370)
395 cd05292 LDH_2 A subgroup of L- 97.2 0.0019 4.2E-08 55.5 8.5 105 67-181 1-116 (308)
396 COG1064 AdhP Zn-dependent alco 97.2 0.0046 1E-07 53.4 10.7 96 65-183 166-261 (339)
397 cd01492 Aos1_SUMO Ubiquitin ac 97.2 0.0046 9.9E-08 49.6 10.2 107 63-188 18-149 (197)
398 PLN02520 bifunctional 3-dehydr 97.2 0.001 2.2E-08 61.4 7.2 44 63-107 376-419 (529)
399 PRK03659 glutathione-regulated 97.2 0.0038 8.3E-08 58.6 11.1 73 66-144 400-473 (601)
400 cd08266 Zn_ADH_like1 Alcohol d 97.2 0.0054 1.2E-07 52.6 11.3 100 65-184 166-268 (342)
401 PRK14027 quinate/shikimate deh 97.2 0.0013 2.9E-08 55.7 7.3 77 64-145 125-204 (283)
402 PRK11064 wecC UDP-N-acetyl-D-m 97.2 0.0024 5.1E-08 57.3 9.2 41 65-106 2-42 (415)
403 PRK08306 dipicolinate synthase 97.2 0.0023 5.1E-08 54.7 8.7 71 63-144 149-219 (296)
404 PRK13940 glutamyl-tRNA reducta 97.2 0.0016 3.4E-08 58.3 7.9 75 63-146 178-253 (414)
405 cd01487 E1_ThiF_like E1_ThiF_l 97.2 0.0079 1.7E-07 47.2 11.0 98 68-183 1-123 (174)
406 PRK06718 precorrin-2 dehydroge 97.2 0.0021 4.5E-08 51.8 7.9 72 63-144 7-79 (202)
407 PRK13982 bifunctional SbtC-lik 97.2 0.0026 5.6E-08 57.5 9.2 77 62-147 252-346 (475)
408 PRK06129 3-hydroxyacyl-CoA deh 97.2 0.0017 3.7E-08 55.8 7.8 37 67-104 3-39 (308)
409 PRK10669 putative cation:proto 97.1 0.004 8.7E-08 58.0 10.5 74 66-144 417-490 (558)
410 cd05290 LDH_3 A subgroup of L- 97.1 0.0036 7.8E-08 53.7 9.4 105 68-182 1-119 (307)
411 PLN02383 aspartate semialdehyd 97.1 0.0074 1.6E-07 52.6 11.4 26 66-91 7-32 (344)
412 COG1179 Dinucleotide-utilizing 97.1 0.0097 2.1E-07 48.6 11.1 104 64-185 28-155 (263)
413 cd08293 PTGR2 Prostaglandin re 97.1 0.0022 4.8E-08 55.6 8.1 99 66-183 155-256 (345)
414 PRK07411 hypothetical protein; 97.1 0.0073 1.6E-07 53.7 11.4 105 62-184 34-163 (390)
415 KOG1198 Zinc-binding oxidoredu 97.1 0.0024 5.3E-08 55.7 8.1 78 64-146 156-236 (347)
416 PRK03562 glutathione-regulated 97.1 0.0058 1.3E-07 57.6 11.0 74 66-144 400-473 (621)
417 KOG0023 Alcohol dehydrogenase, 97.1 0.0036 7.9E-08 53.1 8.4 101 65-183 181-281 (360)
418 PRK08655 prephenate dehydrogen 97.0 0.0051 1.1E-07 55.5 9.9 67 67-144 1-67 (437)
419 cd05293 LDH_1 A subgroup of L- 97.0 0.005 1.1E-07 53.0 9.3 107 66-181 3-120 (312)
420 PF02571 CbiJ: Precorrin-6x re 97.0 0.011 2.5E-07 49.1 11.1 75 67-145 1-76 (249)
421 PRK14192 bifunctional 5,10-met 97.0 0.0029 6.2E-08 53.7 7.7 56 63-144 156-211 (283)
422 PTZ00082 L-lactate dehydrogena 97.0 0.0061 1.3E-07 52.7 9.8 108 65-181 5-128 (321)
423 TIGR01763 MalateDH_bact malate 97.0 0.0034 7.4E-08 53.9 8.2 112 67-182 2-119 (305)
424 PLN02602 lactate dehydrogenase 97.0 0.0023 5.1E-08 55.8 7.2 106 67-181 38-154 (350)
425 PRK00048 dihydrodipicolinate r 97.0 0.0055 1.2E-07 51.3 9.2 66 67-144 2-69 (257)
426 PF03721 UDPG_MGDP_dh_N: UDP-g 97.0 0.0031 6.7E-08 50.1 7.2 110 67-183 1-121 (185)
427 PF13241 NAD_binding_7: Putati 97.0 0.011 2.5E-07 42.1 9.5 90 63-183 4-93 (103)
428 COG0169 AroE Shikimate 5-dehyd 97.0 0.0018 3.8E-08 54.8 6.1 106 63-175 123-244 (283)
429 cd08294 leukotriene_B4_DH_like 97.0 0.0039 8.4E-08 53.6 8.2 99 65-183 143-243 (329)
430 PRK09424 pntA NAD(P) transhydr 97.0 0.01 2.2E-07 54.3 11.1 104 65-182 164-286 (509)
431 PRK00045 hemA glutamyl-tRNA re 96.9 0.0036 7.7E-08 56.3 8.0 73 64-146 180-253 (423)
432 PRK14852 hypothetical protein; 96.9 0.01 2.2E-07 57.9 11.1 107 62-184 328-459 (989)
433 cd00300 LDH_like L-lactate deh 96.9 0.0063 1.4E-07 52.1 8.7 104 69-181 1-115 (300)
434 PRK14851 hypothetical protein; 96.9 0.012 2.6E-07 55.9 11.2 104 62-181 39-167 (679)
435 PLN00203 glutamyl-tRNA reducta 96.9 0.004 8.8E-08 57.1 7.9 75 64-145 264-339 (519)
436 cd05213 NAD_bind_Glutamyl_tRNA 96.9 0.0047 1E-07 53.2 7.8 73 64-146 176-249 (311)
437 PLN02586 probable cinnamyl alc 96.9 0.017 3.7E-07 50.7 11.5 74 65-144 183-256 (360)
438 cd08253 zeta_crystallin Zeta-c 96.8 0.0057 1.2E-07 51.9 8.2 76 65-144 144-222 (325)
439 PRK12749 quinate/shikimate deh 96.8 0.0075 1.6E-07 51.3 8.7 80 63-145 121-206 (288)
440 TIGR01035 hemA glutamyl-tRNA r 96.8 0.0053 1.2E-07 55.0 8.1 73 63-145 177-250 (417)
441 cd05188 MDR Medium chain reduc 96.8 0.013 2.8E-07 48.5 10.0 98 65-183 134-234 (271)
442 cd08289 MDR_yhfp_like Yhfp put 96.8 0.016 3.4E-07 49.7 10.8 98 66-183 147-245 (326)
443 TIGR01757 Malate-DH_plant mala 96.8 0.0023 5E-08 56.5 5.6 107 66-181 44-170 (387)
444 COG1004 Ugd Predicted UDP-gluc 96.8 0.0079 1.7E-07 52.6 8.6 109 67-182 1-120 (414)
445 TIGR03026 NDP-sugDHase nucleot 96.8 0.012 2.5E-07 52.8 10.1 40 67-107 1-40 (411)
446 cd05295 MDH_like Malate dehydr 96.8 0.0016 3.5E-08 58.4 4.5 108 66-182 123-250 (452)
447 PRK14175 bifunctional 5,10-met 96.8 0.0062 1.3E-07 51.5 7.7 58 63-146 155-212 (286)
448 PLN02178 cinnamyl-alcohol dehy 96.8 0.024 5.2E-07 50.1 11.8 75 65-145 178-252 (375)
449 cd05276 p53_inducible_oxidored 96.8 0.006 1.3E-07 51.7 7.8 77 65-145 139-218 (323)
450 COG0373 HemA Glutamyl-tRNA red 96.8 0.0054 1.2E-07 54.4 7.5 74 63-146 175-249 (414)
451 PRK07877 hypothetical protein; 96.8 0.014 3.1E-07 55.6 10.7 102 62-182 103-229 (722)
452 PRK06719 precorrin-2 dehydroge 96.8 0.0093 2E-07 46.0 7.9 36 62-98 9-44 (157)
453 TIGR00978 asd_EA aspartate-sem 96.7 0.025 5.5E-07 49.3 11.5 34 67-100 1-35 (341)
454 PRK09880 L-idonate 5-dehydroge 96.7 0.021 4.5E-07 49.7 10.9 96 65-182 169-267 (343)
455 TIGR03451 mycoS_dep_FDH mycoth 96.7 0.021 4.5E-07 50.0 11.0 99 65-183 176-278 (358)
456 cd08250 Mgc45594_like Mgc45594 96.7 0.021 4.6E-07 49.0 10.8 100 65-184 139-240 (329)
457 cd05288 PGDH Prostaglandin deh 96.7 0.0077 1.7E-07 51.7 8.0 100 65-183 145-246 (329)
458 PRK09310 aroDE bifunctional 3- 96.7 0.0036 7.9E-08 57.1 6.1 72 63-145 329-400 (477)
459 cd01075 NAD_bind_Leu_Phe_Val_D 96.7 0.004 8.7E-08 50.1 5.8 43 62-105 24-66 (200)
460 PRK04308 murD UDP-N-acetylmura 96.7 0.023 5.1E-07 51.3 11.1 76 64-147 3-79 (445)
461 PRK00141 murD UDP-N-acetylmura 96.6 0.021 4.6E-07 52.1 10.8 74 64-147 13-86 (473)
462 PF00670 AdoHcyase_NAD: S-aden 96.6 0.016 3.5E-07 44.7 8.3 71 62-146 19-89 (162)
463 cd01491 Ube1_repeat1 Ubiquitin 96.6 0.036 7.9E-07 47.0 11.2 104 63-188 16-144 (286)
464 cd08281 liver_ADH_like1 Zinc-d 96.6 0.027 5.8E-07 49.6 10.9 99 65-183 191-292 (371)
465 PRK08040 putative semialdehyde 96.6 0.032 7E-07 48.5 11.0 35 65-99 3-40 (336)
466 COG2085 Predicted dinucleotide 96.6 0.0035 7.6E-08 50.2 4.6 35 67-102 2-36 (211)
467 PRK06849 hypothetical protein; 96.6 0.009 2E-07 53.0 7.7 38 65-102 3-40 (389)
468 PF02826 2-Hacid_dh_C: D-isome 96.6 0.0078 1.7E-07 47.4 6.5 71 62-146 32-102 (178)
469 cd08239 THR_DH_like L-threonin 96.6 0.034 7.4E-07 48.1 11.1 98 65-182 163-263 (339)
470 COG0240 GpsA Glycerol-3-phosph 96.5 0.0085 1.8E-07 51.4 7.0 74 66-143 1-79 (329)
471 cd01490 Ube1_repeat2 Ubiquitin 96.5 0.038 8.3E-07 49.5 11.3 103 68-186 1-135 (435)
472 cd08268 MDR2 Medium chain dehy 96.5 0.014 2.9E-07 49.7 8.4 78 65-144 144-222 (328)
473 PF03807 F420_oxidored: NADP o 96.5 0.0036 7.9E-08 43.8 4.0 66 68-144 1-70 (96)
474 PLN02353 probable UDP-glucose 96.5 0.023 4.9E-07 51.8 10.1 115 66-183 1-128 (473)
475 PRK05476 S-adenosyl-L-homocyst 96.5 0.013 2.7E-07 52.5 8.2 39 64-103 210-248 (425)
476 TIGR03366 HpnZ_proposed putati 96.5 0.036 7.8E-07 46.8 10.7 99 65-183 120-220 (280)
477 PRK11863 N-acetyl-gamma-glutam 96.5 0.027 5.9E-07 48.4 9.8 33 66-98 2-35 (313)
478 PRK11199 tyrA bifunctional cho 96.5 0.0098 2.1E-07 52.6 7.2 36 65-100 97-132 (374)
479 cd01339 LDH-like_MDH L-lactate 96.5 0.0093 2E-07 51.1 6.9 104 69-181 1-115 (300)
480 PRK06019 phosphoribosylaminoim 96.4 0.014 3E-07 51.6 8.0 67 66-140 2-68 (372)
481 KOG1196 Predicted NAD-dependen 96.4 0.14 3.1E-06 43.3 13.3 108 65-191 153-263 (343)
482 cd08292 ETR_like_2 2-enoyl thi 96.4 0.015 3.3E-07 49.7 8.1 76 65-144 139-217 (324)
483 PF02882 THF_DHG_CYH_C: Tetrah 96.4 0.017 3.7E-07 44.6 7.4 58 63-146 33-90 (160)
484 TIGR02824 quinone_pig3 putativ 96.4 0.015 3.2E-07 49.5 7.9 76 65-144 139-217 (325)
485 PRK06728 aspartate-semialdehyd 96.4 0.037 7.9E-07 48.3 10.3 34 66-99 5-42 (347)
486 cd01079 NAD_bind_m-THF_DH NAD 96.4 0.017 3.7E-07 45.9 7.5 80 63-147 59-138 (197)
487 cd00401 AdoHcyase S-adenosyl-L 96.4 0.018 3.9E-07 51.4 8.4 68 64-145 200-267 (413)
488 cd08244 MDR_enoyl_red Possible 96.4 0.018 3.9E-07 49.2 8.3 76 65-144 142-220 (324)
489 COG2130 Putative NADP-dependen 96.4 0.01 2.2E-07 50.1 6.2 106 65-189 150-257 (340)
490 PRK01438 murD UDP-N-acetylmura 96.3 0.054 1.2E-06 49.5 11.5 73 64-147 14-90 (480)
491 PRK00094 gpsA NAD(P)H-dependen 96.3 0.0095 2.1E-07 51.3 6.3 39 66-105 1-39 (325)
492 PRK06153 hypothetical protein; 96.3 0.053 1.1E-06 47.7 10.7 99 63-180 173-297 (393)
493 cd08243 quinone_oxidoreductase 96.3 0.022 4.7E-07 48.5 8.4 76 65-144 142-217 (320)
494 PRK15057 UDP-glucose 6-dehydro 96.3 0.04 8.7E-07 48.9 10.3 38 68-107 2-39 (388)
495 KOG2018 Predicted dinucleotide 96.3 0.031 6.7E-07 47.4 8.8 35 64-99 72-107 (430)
496 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.045 9.7E-07 49.5 10.8 36 66-101 34-73 (450)
497 cd05212 NAD_bind_m-THF_DH_Cycl 96.3 0.021 4.5E-07 43.1 7.1 36 63-98 25-60 (140)
498 TIGR01851 argC_other N-acetyl- 96.3 0.043 9.3E-07 47.0 9.7 31 67-97 2-33 (310)
499 TIGR03201 dearomat_had 6-hydro 96.3 0.057 1.2E-06 47.0 10.8 40 65-105 166-205 (349)
500 TIGR02818 adh_III_F_hyde S-(hy 96.3 0.067 1.4E-06 47.1 11.2 76 65-145 185-265 (368)
No 1
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=3.2e-29 Score=205.74 Aligned_cols=172 Identities=24% Similarity=0.293 Sum_probs=144.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF 145 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ag~ 145 (252)
++||||||+|+||+|.+.+|++.|++|++++.-...-.+.+. ....+++++|+.| .+.+.+.|.. ++|+|||+||.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~--~~~~~f~~gDi~D-~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL--KLQFKFYEGDLLD-RALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhh--hccCceEEecccc-HHHHHHHHHhcCCCEEEECccc
Confidence 589999999999999999999999999998875443332221 0116899999999 8889999976 79999999986
Q ss_pred CC----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHH-
Q 025456 146 QP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK- 220 (252)
Q Consensus 146 ~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~- 220 (252)
.. -.++.++++.|+.||.+|+++|+++++++|||.||+.+||.+...|..|+ .+..+.++|+++|.+.|++++.
T Consensus 78 ~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~-~~~~p~NPYG~sKlm~E~iL~d~ 156 (329)
T COG1087 78 ISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISET-SPLAPINPYGRSKLMSEEILRDA 156 (329)
T ss_pred cccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCC-CCCCCCCcchhHHHHHHHHHHHH
Confidence 54 24677889999999999999999999999999999999999877666654 3556889999999999998864
Q ss_pred ---cCCcEEEEeCCcccCCCCCCce
Q 025456 221 ---SGINYTIIRPGGLRNEPPTGNI 242 (252)
Q Consensus 221 ---~gi~~~~lrPg~i~~~~~~~~~ 242 (252)
++++++++|-.++.|....|.+
T Consensus 157 ~~a~~~~~v~LRYFN~aGA~~~G~i 181 (329)
T COG1087 157 AKANPFKVVILRYFNVAGACPDGTL 181 (329)
T ss_pred HHhCCCcEEEEEecccccCCCCCcc
Confidence 6899999999999998766554
No 2
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.96 E-value=3.3e-28 Score=212.09 Aligned_cols=173 Identities=16% Similarity=0.111 Sum_probs=138.1
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc----c---c-CCCCeEEEEeeCCCChHHHHHHHcC
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----S---K-DNPSLQIVKADVTEGSAKLSEAIGD 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~----~---~-~~~~~~~i~~Dl~d~~~~~~~~~~~ 134 (252)
.+++|+|+||||+||||++|+++|+++|++|++++|........+ . . ...++.++.+|++| .+.+.+++.+
T Consensus 12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~l~~~~~~ 90 (348)
T PRK15181 12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK-FTDCQKACKN 90 (348)
T ss_pred cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC-HHHHHHHhhC
Confidence 346799999999999999999999999999999998643211111 0 0 11358899999999 7888999998
Q ss_pred CCcEEEEcCCCCC----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHH
Q 025456 135 DSEAVVCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA 210 (252)
Q Consensus 135 ~~d~vi~~ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~s 210 (252)
+|+|||+|+... ..++...+++|+.|+.+++++|++.++++|||+||..+||...+.+..+. .+.++.+.|+.+
T Consensus 91 -~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~-~~~~p~~~Y~~s 168 (348)
T PRK15181 91 -VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEE-RIGRPLSPYAVT 168 (348)
T ss_pred -CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCC-CCCCCCChhhHH
Confidence 999999998643 23455678999999999999999999999999999999986544333332 234566789999
Q ss_pred HHHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 211 KLQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 211 K~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
|.++|.+++ +++++++++||++++|+..
T Consensus 169 K~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 169 KYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 999998764 3589999999999999864
No 3
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.96 E-value=2.4e-28 Score=206.41 Aligned_cols=167 Identities=26% Similarity=0.333 Sum_probs=130.6
Q ss_pred EEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCCCCC
Q 025456 70 FVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQP 147 (252)
Q Consensus 70 lVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~ 147 (252)
|||||+||||++|+++|+++| ++|+++++.+..............+++++|++| .+++.+++++ +|+|||+|+...
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~l~~a~~g-~d~V~H~Aa~~~ 78 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITD-PESLEEALEG-VDVVFHTAAPVP 78 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEecccc-HHHHHHHhcC-CceEEEeCcccc
Confidence 699999999999999999999 789999887654321111122334499999999 8999999999 999999998654
Q ss_pred CC---CCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCC-CCCC---Ccch-hccchhhHHHHHHHHHHHHHH
Q 025456 148 GW---DLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAM-GQIL---NPAY-IFLNVFGLTLIAKLQAEQYIR 219 (252)
Q Consensus 148 ~~---~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~-~~~~---~~~~-~~~~~~~~y~~sK~~~e~~~~ 219 (252)
.. ..+.++++|+.||++++++|++.++++|||+||..+++... +.+. ++.. .+..+...|+.+|+.+|+++.
T Consensus 79 ~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~ 158 (280)
T PF01073_consen 79 PWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVL 158 (280)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHH
Confidence 32 35567899999999999999999999999999999987521 1111 1211 123456789999999999875
Q ss_pred H-c--------CCcEEEEeCCcccCCCC
Q 025456 220 K-S--------GINYTIIRPGGLRNEPP 238 (252)
Q Consensus 220 ~-~--------gi~~~~lrPg~i~~~~~ 238 (252)
+ . .+.+++|||..|+|+..
T Consensus 159 ~a~~~~~~~g~~l~t~~lRP~~IyGp~d 186 (280)
T PF01073_consen 159 EANGSELKNGGRLRTCALRPAGIYGPGD 186 (280)
T ss_pred hhcccccccccceeEEEEeccEEeCccc
Confidence 4 2 28999999999999864
No 4
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.96 E-value=6.3e-27 Score=195.15 Aligned_cols=182 Identities=82% Similarity=1.271 Sum_probs=145.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHH-cCCCcEEEEc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI-GDDSEAVVCA 142 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-~~~~d~vi~~ 142 (252)
.++++|+||||+|+||++++++|+++|++|+++.|++++...... ...+++++++|++|..+++.+.+ .+ +|+||++
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~l~~~~~~~-~d~vi~~ 92 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP-QDPSLQIVRADVTEGSDKLVEAIGDD-SDAVICA 92 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc-cCCceEEEEeeCCCCHHHHHHHhhcC-CCEEEEC
Confidence 457999999999999999999999999999999999876554333 23468999999998335677777 57 9999999
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHcC
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSG 222 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~g 222 (252)
+|.....+....+++|..++.++++++++.++++||++||.++|+...+.+..+.+...+++..|...|..+|+++++.|
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~g 172 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSG 172 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 98754334445578999999999999999999999999999998765444444444444556667788999999999999
Q ss_pred CcEEEEeCCcccCCCCCCceEeecc
Q 025456 223 INYTIIRPGGLRNEPPTGNIIMETE 247 (252)
Q Consensus 223 i~~~~lrPg~i~~~~~~~~~~~~~~ 247 (252)
+++++||||+++++...+.+...+.
T Consensus 173 i~~~iirpg~~~~~~~~~~~~~~~~ 197 (251)
T PLN00141 173 INYTIVRPGGLTNDPPTGNIVMEPE 197 (251)
T ss_pred CcEEEEECCCccCCCCCceEEECCC
Confidence 9999999999998876655554433
No 5
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.95 E-value=5.5e-27 Score=197.03 Aligned_cols=174 Identities=25% Similarity=0.290 Sum_probs=137.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh-----ccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-----TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-----~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
.+++|+|||||||||+||+++|+++||.|++++|+++..+. .+++..++++.+.+||+| .+++++++.+ +|+|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d-~~sf~~ai~g-cdgV 82 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLD-EGSFDKAIDG-CDGV 82 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccc-cchHHHHHhC-CCEE
Confidence 47999999999999999999999999999999999987432 223345679999999999 8999999999 9999
Q ss_pred EEcCCCCCCCC--CC-CcceehHHHHHHHHHHHHhcC-CCEEEEEccceeeccC---C--CCCCCcch-hc----cchhh
Q 025456 140 VCATGFQPGWD--LF-APWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAA---M--GQILNPAY-IF----LNVFG 205 (252)
Q Consensus 140 i~~ag~~~~~~--~~-~~~~~n~~g~~~ll~~~~~~~-~~~~v~~SS~~v~~~~---~--~~~~~~~~-~~----~~~~~ 205 (252)
||.|.+..... ++ +.++.++.|+.|++++|++.. ++|+|++||..+-... . ....++.. .. ..-..
T Consensus 83 fH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~ 162 (327)
T KOG1502|consen 83 FHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKL 162 (327)
T ss_pred EEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHH
Confidence 99998765332 23 678999999999999999887 9999999998753221 1 11222221 11 11126
Q ss_pred HHHHHHHHHHHH----HHHcCCcEEEEeCCcccCCCCCC
Q 025456 206 LTLIAKLQAEQY----IRKSGINYTIIRPGGLRNEPPTG 240 (252)
Q Consensus 206 ~y~~sK~~~e~~----~~~~gi~~~~lrPg~i~~~~~~~ 240 (252)
+|..+|..+|+. .++.+++.+.+-|+.|.||....
T Consensus 163 ~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~ 201 (327)
T KOG1502|consen 163 WYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP 201 (327)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccc
Confidence 899999998864 45678999999999999997543
No 6
>PLN02214 cinnamoyl-CoA reductase
Probab=99.95 E-value=9.7e-27 Score=202.40 Aligned_cols=172 Identities=24% Similarity=0.289 Sum_probs=137.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh----ccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT----TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
++++|+||||+||||++++++|+++|++|++++|+.+.... .+.....+++++.+|++| .+++.+++.+ +|+||
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~-~d~Vi 86 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD-YEALKAAIDG-CDGVF 86 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCC-hHHHHHHHhc-CCEEE
Confidence 57899999999999999999999999999999998654211 111122468899999999 8889999998 99999
Q ss_pred EcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc-eeeccCCCC---CCCcch-----hccchhhHHHHHH
Q 025456 141 CATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI-LVNGAAMGQ---ILNPAY-----IFLNVFGLTLIAK 211 (252)
Q Consensus 141 ~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~-~v~~~~~~~---~~~~~~-----~~~~~~~~y~~sK 211 (252)
|+|+... .++...+++|+.|+.+++++|++.++++||++||. .+|+..... +.++.. .+.++...|+.+|
T Consensus 87 h~A~~~~-~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK 165 (342)
T PLN02214 87 HTASPVT-DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGK 165 (342)
T ss_pred EecCCCC-CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHH
Confidence 9998653 35567789999999999999999999999999996 578743221 233331 1334567899999
Q ss_pred HHHHHHHH----HcCCcEEEEeCCcccCCCCC
Q 025456 212 LQAEQYIR----KSGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 212 ~~~e~~~~----~~gi~~~~lrPg~i~~~~~~ 239 (252)
.++|+++. ++|++++++||++++|+...
T Consensus 166 ~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~ 197 (342)
T PLN02214 166 MVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQ 197 (342)
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence 99998774 35999999999999998753
No 7
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.95 E-value=1.3e-26 Score=207.65 Aligned_cols=175 Identities=18% Similarity=0.175 Sum_probs=132.1
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh--------------------hhccccCCCCeEEEEeeC
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA--------------------KTTLSKDNPSLQIVKADV 121 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~--------------------~~~~~~~~~~~~~i~~Dl 121 (252)
...++|+|+||||+||||++|+++|+++|++|++++|..... +........+++++.+|+
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 122 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI 122 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence 445789999999999999999999999999999987432100 000000123689999999
Q ss_pred CCChHHHHHHHcC-CCcEEEEcCCCCCC----CC---CCCcceehHHHHHHHHHHHHhcCCC-EEEEEccceeeccCCCC
Q 025456 122 TEGSAKLSEAIGD-DSEAVVCATGFQPG----WD---LFAPWKVDNFGTVNLVEACRKRGVN-RFILISSILVNGAAMGQ 192 (252)
Q Consensus 122 ~d~~~~~~~~~~~-~~d~vi~~ag~~~~----~~---~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~SS~~v~~~~~~~ 192 (252)
+| .+.+.+++.+ ++|+|||+|+.... .+ +...+++|+.|+.+++++|++.+++ +||++||..+||....
T Consensus 123 ~d-~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~- 200 (442)
T PLN02572 123 CD-FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNI- 200 (442)
T ss_pred CC-HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCC-
Confidence 99 8889988874 48999999975321 11 2234679999999999999999885 8999999999986421
Q ss_pred CCCc-----------ch--hccchhhHHHHHHHHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 193 ILNP-----------AY--IFLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 193 ~~~~-----------~~--~~~~~~~~y~~sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
+.++ +. .+.++.+.|+.+|.++|.+++ .+|++++++||+++||+..
T Consensus 201 ~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 201 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 263 (442)
T ss_pred CCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence 1111 11 244566789999999998764 4599999999999999874
No 8
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.94 E-value=3.5e-26 Score=199.24 Aligned_cols=169 Identities=15% Similarity=0.232 Sum_probs=134.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHC-CCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
||+|+||||+||||++|+++|+++ |++|++++|+.+....... ..+++++.+|++++.+.+.+++.+ +|+|||+|+
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~-~d~ViH~aa 77 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN--HPRMHFFEGDITINKEWIEYHVKK-CDVILPLVA 77 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc--CCCeEEEeCCCCCCHHHHHHHHcC-CCEEEECcc
Confidence 468999999999999999999986 7999999987654333322 246899999998426777788888 999999998
Q ss_pred CCC----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhc------cchhhHHHHHHHHH
Q 025456 145 FQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF------LNVFGLTLIAKLQA 214 (252)
Q Consensus 145 ~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~------~~~~~~y~~sK~~~ 214 (252)
... ..++...+++|+.++.+++++|++.+ ++|||+||..+||...+.+..++..+ .++.+.|+.+|.++
T Consensus 78 ~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~ 156 (347)
T PRK11908 78 IATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLM 156 (347)
T ss_pred cCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHH
Confidence 643 24556678999999999999999988 69999999999986544333333221 24556899999999
Q ss_pred HHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 215 EQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 215 e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
|++++ +++++++++||++++|+..
T Consensus 157 e~~~~~~~~~~~~~~~ilR~~~v~Gp~~ 184 (347)
T PRK11908 157 DRVIWAYGMEEGLNFTLFRPFNWIGPGL 184 (347)
T ss_pred HHHHHHHHHHcCCCeEEEeeeeeeCCCc
Confidence 98775 3689999999999999864
No 9
>PLN02427 UDP-apiose/xylose synthase
Probab=99.94 E-value=5e-26 Score=201.03 Aligned_cols=171 Identities=20% Similarity=0.203 Sum_probs=132.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHC-CCeEEEeecCchhhhhcccc----CCCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
+.|+|+||||+||||++|+++|+++ |++|++++|+.+........ ...+++++.+|++| .+.+.+++.+ +|+|
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~~-~d~V 90 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKH-DSRLEGLIKM-ADLT 90 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCC-hHHHHHHhhc-CCEE
Confidence 4679999999999999999999998 59999999876554332211 12469999999999 7889999998 9999
Q ss_pred EEcCCCCCC----CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcch---------------hc
Q 025456 140 VCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAY---------------IF 200 (252)
Q Consensus 140 i~~ag~~~~----~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~---------------~~ 200 (252)
||+|+.... .++.+.+..|+.++.+++++|++.+ ++|||+||..+||...+.+..+.. .+
T Consensus 91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~ 169 (386)
T PLN02427 91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESP 169 (386)
T ss_pred EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccc
Confidence 999986432 2233456789999999999999887 799999999999864322111100 00
Q ss_pred ------cchhhHHHHHHHHHHHHHHH----cCCcEEEEeCCcccCCCC
Q 025456 201 ------LNVFGLTLIAKLQAEQYIRK----SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 201 ------~~~~~~y~~sK~~~e~~~~~----~gi~~~~lrPg~i~~~~~ 238 (252)
.++.+.|+.+|.++|+++.. ++++++++||++++|+..
T Consensus 170 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 217 (386)
T PLN02427 170 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRM 217 (386)
T ss_pred cccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCC
Confidence 12335799999999988753 589999999999999864
No 10
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.94 E-value=1.3e-25 Score=194.91 Aligned_cols=172 Identities=25% Similarity=0.241 Sum_probs=132.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh-----ccccCCCCeEEEEeeCCCChHHHHHHHcCCCcE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-----TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEA 138 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-----~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~ 138 (252)
+++++|+||||+||||++|+++|+++|++|++++|+.+.... .+. ...+++++.+|++| .+++.+.+.+ +|+
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d-~~~~~~~~~~-~d~ 83 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQ-ELGDLKIFGADLTD-EESFEAPIAG-CDL 83 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcC-CCCceEEEEcCCCC-hHHHHHHHhc-CCE
Confidence 457999999999999999999999999999988887643221 111 11368899999999 7889999988 999
Q ss_pred EEEcCCCCCCC--CC-CCcceehHHHHHHHHHHHHhc-CCCEEEEEccceeeccCC----CCCCCcch--------hccc
Q 025456 139 VVCATGFQPGW--DL-FAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVNGAAM----GQILNPAY--------IFLN 202 (252)
Q Consensus 139 vi~~ag~~~~~--~~-~~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~~v~~~~~----~~~~~~~~--------~~~~ 202 (252)
|||+|+..... ++ ...+++|+.|+.++++++++. ++++||++||..+|+... +.+.++.. ....
T Consensus 84 vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~ 163 (338)
T PLN00198 84 VFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKP 163 (338)
T ss_pred EEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCC
Confidence 99999854321 22 234689999999999999876 578999999999997431 11222211 1223
Q ss_pred hhhHHHHHHHHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
+...|+.+|.++|.+++ +++++++++||++++|+..
T Consensus 164 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~ 203 (338)
T PLN00198 164 PTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSL 203 (338)
T ss_pred ccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCc
Confidence 56779999999997664 4699999999999999964
No 11
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.94 E-value=5.4e-26 Score=198.23 Aligned_cols=172 Identities=24% Similarity=0.191 Sum_probs=134.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc--cCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~ 141 (252)
++|+|+||||+||||+++++.|+++|++|++++|+......... ....++.++.+|++| .+++.+.+.+ ++|+|||
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-AAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-HHHHHHHHhhcCCCEEEE
Confidence 47999999999999999999999999999999987654322111 112357789999999 8888888875 4799999
Q ss_pred cCCCCC----CCCCCCcceehHHHHHHHHHHHHhcC-CCEEEEEccceeeccCCC-CCCCcchhccchhhHHHHHHHHHH
Q 025456 142 ATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAAMG-QILNPAYIFLNVFGLTLIAKLQAE 215 (252)
Q Consensus 142 ~ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~-~~~~v~~SS~~v~~~~~~-~~~~~~~~~~~~~~~y~~sK~~~e 215 (252)
+|+... ..++...+++|+.++.+++++|++.+ +++||++||..+|+.... .+..+ ..+.++.+.|+.+|.++|
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e-~~~~~p~~~Y~~sK~~~e 160 (349)
T TIGR02622 82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRE-TDPLGGHDPYSSSKACAE 160 (349)
T ss_pred CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCcc-CCCCCCCCcchhHHHHHH
Confidence 998532 23455678999999999999998876 789999999999975422 12222 223456778999999999
Q ss_pred HHHHH-----------cCCcEEEEeCCcccCCCC
Q 025456 216 QYIRK-----------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 216 ~~~~~-----------~gi~~~~lrPg~i~~~~~ 238 (252)
.+++. .+++++++||++++|+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~ 194 (349)
T TIGR02622 161 LVIASYRSSFFGVANFHGIKIASARAGNVIGGGD 194 (349)
T ss_pred HHHHHHHHHhhcccccCCCcEEEEccCcccCCCc
Confidence 87753 289999999999999853
No 12
>PLN02650 dihydroflavonol-4-reductase
Probab=99.94 E-value=2.1e-25 Score=194.65 Aligned_cols=172 Identities=23% Similarity=0.254 Sum_probs=132.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhc---cc--cCCCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~---~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
+.++||||||+||||++++++|+++|++|++++|+.+..... .. ....+++++.+|++| .+.+.+++.+ +|+|
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~~~~~~~~-~d~V 81 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAV-EGSFDDAIRG-CTGV 81 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCC-hhhHHHHHhC-CCEE
Confidence 468999999999999999999999999999999986543321 11 112358899999999 7889999998 9999
Q ss_pred EEcCCCCCC--CCC-CCcceehHHHHHHHHHHHHhcC-CCEEEEEccceeeccCCC-CC-CCcch--------hccchhh
Q 025456 140 VCATGFQPG--WDL-FAPWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAAMG-QI-LNPAY--------IFLNVFG 205 (252)
Q Consensus 140 i~~ag~~~~--~~~-~~~~~~n~~g~~~ll~~~~~~~-~~~~v~~SS~~v~~~~~~-~~-~~~~~--------~~~~~~~ 205 (252)
||+|+.... .++ ...+++|+.|+.+++++|++.+ +++|||+||.++|+.... .+ ..+.. .+..+.+
T Consensus 82 iH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 161 (351)
T PLN02650 82 FHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGW 161 (351)
T ss_pred EEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccc
Confidence 999986432 122 3578999999999999999876 789999999977654221 11 12221 1112345
Q ss_pred HHHHHHHHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 206 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 206 ~y~~sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
.|+.+|.++|.+++ ++|++++++||++++|+..
T Consensus 162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~ 198 (351)
T PLN02650 162 MYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFI 198 (351)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCC
Confidence 79999999998764 4699999999999999864
No 13
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.94 E-value=7e-26 Score=193.53 Aligned_cols=154 Identities=14% Similarity=0.068 Sum_probs=127.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF 145 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ag~ 145 (252)
|+||||||+||||++++++|+++| +|++++|... .+.+|++| .+.+.+++.+ ++|+|||+|+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------~~~~Dl~d-~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------DYCGDFSN-PEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------cccCCCCC-HHHHHHHHHhcCCCEEEECCcc
Confidence 479999999999999999999999 7988877531 23589999 8889888874 48999999987
Q ss_pred CCC----CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHc
Q 025456 146 QPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS 221 (252)
Q Consensus 146 ~~~----~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~ 221 (252)
... .+++..+++|+.++.+++++|++.++ +|||+||..+|+.....+..|.. +.+|.+.|+.+|.++|++++.+
T Consensus 65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~-~~~P~~~Yg~sK~~~E~~~~~~ 142 (299)
T PRK09987 65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETD-ATAPLNVYGETKLAGEKALQEH 142 (299)
T ss_pred CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCC-CCCCCCHHHHHHHHHHHHHHHh
Confidence 542 23344568999999999999999996 89999999999876544554433 4567788999999999999887
Q ss_pred CCcEEEEeCCcccCCCC
Q 025456 222 GINYTIIRPGGLRNEPP 238 (252)
Q Consensus 222 gi~~~~lrPg~i~~~~~ 238 (252)
..+++++||+++||+..
T Consensus 143 ~~~~~ilR~~~vyGp~~ 159 (299)
T PRK09987 143 CAKHLIFRTSWVYAGKG 159 (299)
T ss_pred CCCEEEEecceecCCCC
Confidence 78899999999999854
No 14
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.94 E-value=2.6e-25 Score=191.57 Aligned_cols=171 Identities=24% Similarity=0.321 Sum_probs=131.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhh---hcc--ccCCCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK---TTL--SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
++++|+||||+||||++|+++|+++|++|++++|+..... ... .....+++++++|++| .+.+.+++.+ +|+|
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~-~d~V 80 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLE-EGSFDSVVDG-CEGV 80 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccC-cchHHHHHcC-CCEE
Confidence 3689999999999999999999999999999998765321 111 1112478999999999 7889999998 9999
Q ss_pred EEcCCCCCC--CCCC-CcceehHHHHHHHHHHHHhc-CCCEEEEEccce--eeccCC---CCCCCcchhccch------h
Q 025456 140 VCATGFQPG--WDLF-APWKVDNFGTVNLVEACRKR-GVNRFILISSIL--VNGAAM---GQILNPAYIFLNV------F 204 (252)
Q Consensus 140 i~~ag~~~~--~~~~-~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~~--v~~~~~---~~~~~~~~~~~~~------~ 204 (252)
||+|+.... .++. ..+++|+.|+.+++++|++. ++++||++||.+ +|+... +.+.++.. +.++ .
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~-~~~p~~~~~~~ 159 (322)
T PLN02662 81 FHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETW-FSDPAFCEESK 159 (322)
T ss_pred EEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCccc-CCChhHhhccc
Confidence 999986432 2232 56789999999999999887 889999999976 465321 11223322 1122 2
Q ss_pred hHHHHHHHHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 205 GLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 205 ~~y~~sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
..|+.+|..+|++++ +.+++++++||++++|+..
T Consensus 160 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~ 197 (322)
T PLN02662 160 LWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLL 197 (322)
T ss_pred chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCC
Confidence 579999999998764 4699999999999999864
No 15
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.93 E-value=7.9e-25 Score=197.29 Aligned_cols=170 Identities=36% Similarity=0.584 Sum_probs=135.3
Q ss_pred hcccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc------------CCCCeEEEEeeCCCChHH
Q 025456 60 ENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK------------DNPSLQIVKADVTEGSAK 127 (252)
Q Consensus 60 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~------------~~~~~~~i~~Dl~d~~~~ 127 (252)
....+++++|+||||+|+||++++++|+++|++|++++|+.++....... ...+++++.+|++| .++
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-~es 152 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-PDQ 152 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC-HHH
Confidence 34445789999999999999999999999999999999998765432210 11358899999999 888
Q ss_pred HHHHHcCCCcEEEEcCCCCCC--CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 128 LSEAIGDDSEAVVCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 128 ~~~~~~~~~d~vi~~ag~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
+.+++++ +|+||||+|.... .++...+++|+.|+.+++++|++.++++||++||.+++... .+. . ..+...
T Consensus 153 I~~aLgg-iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g--~p~-~---~~~sk~ 225 (576)
T PLN03209 153 IGPALGN-ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG--FPA-A---ILNLFW 225 (576)
T ss_pred HHHHhcC-CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC--ccc-c---chhhHH
Confidence 9999998 9999999986532 24455678999999999999999999999999998653111 110 0 123456
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCcccCCC
Q 025456 206 LTLIAKLQAEQYIRKSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 206 ~y~~sK~~~e~~~~~~gi~~~~lrPg~i~~~~ 237 (252)
.|...|..+|+++.+.|++|++||||++.++.
T Consensus 226 ~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~ 257 (576)
T PLN03209 226 GVLCWKRKAEEALIASGLPYTIVRPGGMERPT 257 (576)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEECCeecCCc
Confidence 67788999999999999999999999998764
No 16
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.93 E-value=4.3e-25 Score=193.94 Aligned_cols=169 Identities=18% Similarity=0.123 Sum_probs=132.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
++|+|+||||+||||+++++.|+++|++|++++|..... ........+++.+|++| .+.+.+++.+ +|+|||+|+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~---~~~~~~~~~~~~~Dl~d-~~~~~~~~~~-~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH---MSEDMFCHEFHLVDLRV-MENCLKVTKG-VDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc---cccccccceEEECCCCC-HHHHHHHHhC-CCEEEEccc
Confidence 578999999999999999999999999999999864321 11111235788899999 7888888888 999999997
Q ss_pred CCC-----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCC----CCCcch-hccchhhHHHHHHHHH
Q 025456 145 FQP-----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQ----ILNPAY-IFLNVFGLTLIAKLQA 214 (252)
Q Consensus 145 ~~~-----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~----~~~~~~-~~~~~~~~y~~sK~~~ 214 (252)
... ..++...+..|+.++.+++++|++.++++|||+||..+|+..... +..+.. .+..+.+.|+.+|.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~ 174 (370)
T PLN02695 95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 174 (370)
T ss_pred ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHH
Confidence 532 123344567899999999999999999999999999999864321 122222 2456678899999999
Q ss_pred HHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 215 EQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 215 e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
|++++ ++|++++++||+++||+..
T Consensus 175 E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 175 EELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred HHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 98764 4699999999999999864
No 17
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.93 E-value=4.1e-25 Score=190.76 Aligned_cols=172 Identities=26% Similarity=0.327 Sum_probs=132.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh---ccc--cCCCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT---TLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
++|+|+||||+||||++++++|+++|++|++++|+...... ... ....+++++.+|++| .+++.+++.+ +|+|
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~-~d~v 81 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLD-EGSFELAIDG-CETV 81 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCC-chHHHHHHcC-CCEE
Confidence 37899999999999999999999999999998888654321 111 112468899999999 7889999988 9999
Q ss_pred EEcCCCCCC----CCCCCcceehHHHHHHHHHHHHhc-CCCEEEEEccceeeccCC-----CCCCCcchhccch------
Q 025456 140 VCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVNGAAM-----GQILNPAYIFLNV------ 203 (252)
Q Consensus 140 i~~ag~~~~----~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~~v~~~~~-----~~~~~~~~~~~~~------ 203 (252)
|||||.... .++...+++|+.|+.+++++|.+. +.++||++||..+|+... ..+.+|.. +.++
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~-~~~p~~~~~~ 160 (325)
T PLN02989 82 FHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETF-FTNPSFAEER 160 (325)
T ss_pred EEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCC-CCchhHhccc
Confidence 999986431 234456789999999999999875 568999999988765421 11223322 2222
Q ss_pred hhHHHHHHHHHHHHHH----HcCCcEEEEeCCcccCCCCC
Q 025456 204 FGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~~ 239 (252)
...|+.+|.++|++++ +++++++++||++++|+...
T Consensus 161 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 200 (325)
T PLN02989 161 KQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQ 200 (325)
T ss_pred ccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCC
Confidence 3579999999998764 46899999999999998753
No 18
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.93 E-value=4.9e-25 Score=192.51 Aligned_cols=174 Identities=24% Similarity=0.282 Sum_probs=131.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcCCCcEEEE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~ 141 (252)
.++++|+||||+||||++++++|+++|++|++++|+.......... ...+++++.+|++| .+++.+++.+ +|+|||
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~-~d~Vih 85 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQE-EGSFDEAVKG-CDGVFH 85 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCC-HHHHHHHHcC-CCEEEE
Confidence 3578999999999999999999999999999999986554332211 13468899999999 8889999988 999999
Q ss_pred cCCCCCCC------CCCCc-----ceehHHHHHHHHHHHHhcC-CCEEEEEccceeeccCCC-----CCCCcch-hc---
Q 025456 142 ATGFQPGW------DLFAP-----WKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAAMG-----QILNPAY-IF--- 200 (252)
Q Consensus 142 ~ag~~~~~------~~~~~-----~~~n~~g~~~ll~~~~~~~-~~~~v~~SS~~v~~~~~~-----~~~~~~~-~~--- 200 (252)
+|+..... ++... ++.|+.|+.+++++|++.+ +++||++||..+|+.... .+.++.. .+
T Consensus 86 ~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~ 165 (353)
T PLN02896 86 VAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDH 165 (353)
T ss_pred CCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHH
Confidence 99864321 22222 3445689999999998875 789999999999985321 1222321 11
Q ss_pred ----cchhhHHHHHHHHHHHHHH----HcCCcEEEEeCCcccCCCCC
Q 025456 201 ----LNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 201 ----~~~~~~y~~sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~~ 239 (252)
..+...|+.+|.++|++++ +++++++++||++++|+...
T Consensus 166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~ 212 (353)
T PLN02896 166 VWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLT 212 (353)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcC
Confidence 1233579999999998664 46999999999999999653
No 19
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.93 E-value=5e-25 Score=190.03 Aligned_cols=172 Identities=27% Similarity=0.348 Sum_probs=131.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh---ccc--cCCCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT---TLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
.+++|+||||+||||++++++|+++|++|+++.|+....+. ... ....+++++.+|++| .+.+.+++.+ +|+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~-~d~v 81 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE-ESSFEQAIEG-CDAV 81 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCC-cchHHHHHhC-CCEE
Confidence 47899999999999999999999999999999998654321 111 112468999999999 7889999998 9999
Q ss_pred EEcCCCCCC--CCC-CCcceehHHHHHHHHHHHHhc-CCCEEEEEccceee--ccCC---CCCCCcchhc-----cchhh
Q 025456 140 VCATGFQPG--WDL-FAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVN--GAAM---GQILNPAYIF-----LNVFG 205 (252)
Q Consensus 140 i~~ag~~~~--~~~-~~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~~v~--~~~~---~~~~~~~~~~-----~~~~~ 205 (252)
||+|+.... .++ ...+++|+.|+.+++++|++. ++++||++||.++| +... +.+.++.... ..+..
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 161 (322)
T PLN02986 82 FHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN 161 (322)
T ss_pred EEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence 999986432 122 246789999999999999885 68999999998754 3221 1122222111 12346
Q ss_pred HHHHHHHHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 206 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 206 ~y~~sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
.|+.+|.++|.++. +++++++++||++++|+..
T Consensus 162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~ 198 (322)
T PLN02986 162 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLL 198 (322)
T ss_pred chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCC
Confidence 79999999997654 4699999999999999864
No 20
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.93 E-value=4.3e-25 Score=207.03 Aligned_cols=170 Identities=18% Similarity=0.261 Sum_probs=133.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHC-CCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~a 143 (252)
.+|+|+||||+||||++|+++|+++ |++|++++|......... ...+++++.+|++|..+.+.+++.+ +|+|||+|
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~--~~~~~~~~~gDl~d~~~~l~~~l~~-~D~ViHlA 390 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL--GHPRFHFVEGDISIHSEWIEYHIKK-CDVVLPLV 390 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc--CCCceEEEeccccCcHHHHHHHhcC-CCEEEECc
Confidence 4689999999999999999999986 799999999775433322 2246899999999833336777888 99999999
Q ss_pred CCCCC----CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchh-----c-cchhhHHHHHHHH
Q 025456 144 GFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI-----F-LNVFGLTLIAKLQ 213 (252)
Q Consensus 144 g~~~~----~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~-----~-~~~~~~y~~sK~~ 213 (252)
+.... .++...+++|+.++.+++++|++.+ ++|||+||..+||...+.+.++... + .++.+.|+.+|.+
T Consensus 391 a~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~ 469 (660)
T PRK08125 391 AIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQL 469 (660)
T ss_pred cccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHH
Confidence 86442 2344567899999999999999988 7999999999998654434444321 1 1344679999999
Q ss_pred HHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 214 AEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 214 ~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
+|++++ .++++++++||++++|+..
T Consensus 470 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 498 (660)
T PRK08125 470 LDRVIWAYGEKEGLRFTLFRPFNWMGPRL 498 (660)
T ss_pred HHHHHHHHHHhcCCceEEEEEceeeCCCc
Confidence 998874 4689999999999999864
No 21
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.93 E-value=7.2e-25 Score=187.76 Aligned_cols=168 Identities=28% Similarity=0.310 Sum_probs=134.4
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCC-cEEEEcCCCC
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDS-EAVVCATGFQ 146 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-d~vi~~ag~~ 146 (252)
.||||||+||||++|+++|+++|++|++++|......... .++.++.+|++| .+.+.+.+.+ . |+|||+|+..
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~d~~~-~~~~~~~~~~-~~d~vih~aa~~ 75 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----SGVEFVVLDLTD-RDLVDELAKG-VPDAVIHLAAQS 75 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----cccceeeecccc-hHHHHHHHhc-CCCEEEEccccC
Confidence 4999999999999999999999999999999876543321 468899999999 6777777777 6 9999999876
Q ss_pred CCCC-----CCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccC-CCCCCCcchhccchhhHHHHHHHHHHHHHHH
Q 025456 147 PGWD-----LFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAA-MGQILNPAYIFLNVFGLTLIAKLQAEQYIRK 220 (252)
Q Consensus 147 ~~~~-----~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~-~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~ 220 (252)
.... +...+++|+.++.+++++|++.++++|||.||.++|+.. .+.+..+...+..+.+.|+.+|.++|+++..
T Consensus 76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~ 155 (314)
T COG0451 76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRA 155 (314)
T ss_pred chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 5322 223789999999999999999999999998888877654 2223333323445555899999999998764
Q ss_pred ----cCCcEEEEeCCcccCCCCCCc
Q 025456 221 ----SGINYTIIRPGGLRNEPPTGN 241 (252)
Q Consensus 221 ----~gi~~~~lrPg~i~~~~~~~~ 241 (252)
.+++++++||++++|+.....
T Consensus 156 ~~~~~~~~~~ilR~~~vyGp~~~~~ 180 (314)
T COG0451 156 YARLYGLPVVILRPFNVYGPGDKPD 180 (314)
T ss_pred HHHHhCCCeEEEeeeeeeCCCCCCC
Confidence 469999999999999986554
No 22
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.93 E-value=7.2e-25 Score=189.33 Aligned_cols=156 Identities=24% Similarity=0.367 Sum_probs=126.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhhcccc-CCCCeEEEEeeCCCChHHHHHHHcCCCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~ 141 (252)
++|+|+||||+||||++++++|+++| ++|++++|+.......... ...+++++.+|++| .+++.+++.+ +|+|||
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~l~~~~~~-iD~Vih 80 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD-KERLTRALRG-VDYVVH 80 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHhc-CCEEEE
Confidence 57999999999999999999999986 7899998876543221111 12468999999999 8999999998 999999
Q ss_pred cCCCCC----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHH
Q 025456 142 ATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY 217 (252)
Q Consensus 142 ~ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~ 217 (252)
+||... ..++...+++|+.|+.+++++|++.++++||++||... ..+.+.|+.+|+++|.+
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~---------------~~p~~~Y~~sK~~~E~l 145 (324)
T TIGR03589 81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA---------------ANPINLYGATKLASDKL 145 (324)
T ss_pred CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC---------------CCCCCHHHHHHHHHHHH
Confidence 998643 22344678999999999999999999899999998521 12346799999999987
Q ss_pred HH-------HcCCcEEEEeCCcccCCC
Q 025456 218 IR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 218 ~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
++ +.|++++++|||+++|+.
T Consensus 146 ~~~~~~~~~~~gi~~~~lR~g~v~G~~ 172 (324)
T TIGR03589 146 FVAANNISGSKGTRFSVVRYGNVVGSR 172 (324)
T ss_pred HHHHHhhccccCcEEEEEeecceeCCC
Confidence 64 358999999999999975
No 23
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.93 E-value=9.2e-25 Score=190.04 Aligned_cols=170 Identities=21% Similarity=0.175 Sum_probs=132.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh-----hhhcccc----CCCCeEEEEeeCCCChHHHHHHHcC-CC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-----AKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGD-DS 136 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~~~----~~~~~~~i~~Dl~d~~~~~~~~~~~-~~ 136 (252)
|+|+||||+||||++|+++|+++|++|++++|+++. ....... ...+++++.+|++| .+.+.+++.+ ++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~~~~~ 79 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTD-SSNLRRIIDEIKP 79 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCC-HHHHHHHHHhCCC
Confidence 589999999999999999999999999999987642 1111110 12468999999999 8889998885 37
Q ss_pred cEEEEcCCCCCC----CCCCCcceehHHHHHHHHHHHHhcCCC---EEEEEccceeeccCCCCCCCcchhccchhhHHHH
Q 025456 137 EAVVCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVN---RFILISSILVNGAAMGQILNPAYIFLNVFGLTLI 209 (252)
Q Consensus 137 d~vi~~ag~~~~----~~~~~~~~~n~~g~~~ll~~~~~~~~~---~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~ 209 (252)
|+|||+|+.... .+....+++|+.|+.+++++|++.+++ +||++||..+||.....+..+. .+..+.+.|+.
T Consensus 80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-~~~~p~~~Y~~ 158 (343)
T TIGR01472 80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNET-TPFYPRSPYAA 158 (343)
T ss_pred CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCC-CCCCCCChhHH
Confidence 999999986432 123345678999999999999988763 8999999999986544343332 34566788999
Q ss_pred HHHHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 210 AKLQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 210 sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
+|.++|.+++ +++++++..|+.+++++..
T Consensus 159 sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~ 191 (343)
T TIGR01472 159 AKLYAHWITVNYREAYGLFAVNGILFNHESPRR 191 (343)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEeecccCCCCC
Confidence 9999998874 3589999999988888753
No 24
>PLN02583 cinnamoyl-CoA reductase
Probab=99.92 E-value=3.7e-24 Score=182.79 Aligned_cols=173 Identities=18% Similarity=0.238 Sum_probs=129.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhh--hccc---cCCCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK--TTLS---KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
.+++|+||||+||||++++++|+++|++|++++|+.+..+ ..+. ....+++++.+|++| .+++.+++.+ +|.|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~~~~~l~~-~d~v 82 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLD-YHSILDALKG-CSGL 82 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCC-HHHHHHHHcC-CCEE
Confidence 3689999999999999999999999999999998643211 1111 113468899999999 8889999999 9999
Q ss_pred EEcCCCCCC--CCCCCcceehHHHHHHHHHHHHhc-CCCEEEEEccceee--ccC---CCCCCCcchhc-----cchhhH
Q 025456 140 VCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVN--GAA---MGQILNPAYIF-----LNVFGL 206 (252)
Q Consensus 140 i~~ag~~~~--~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~~v~--~~~---~~~~~~~~~~~-----~~~~~~ 206 (252)
+|.++.... .++++.+++|+.|+.+++++|.+. ++++||++||..++ +.. ...+.++.... ......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~ 162 (297)
T PLN02583 83 FCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLW 162 (297)
T ss_pred EEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccH
Confidence 998764332 224567899999999999999876 57899999998664 211 11122222110 011136
Q ss_pred HHHHHHHHHHHHH----HcCCcEEEEeCCcccCCCCC
Q 025456 207 TLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 207 y~~sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~~ 239 (252)
|+.+|..+|+++. +.|+++++|||++++|+...
T Consensus 163 Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~ 199 (297)
T PLN02583 163 HALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLT 199 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCC
Confidence 9999999998773 46999999999999998753
No 25
>PLN02686 cinnamoyl-CoA reductase
Probab=99.92 E-value=2.8e-24 Score=188.54 Aligned_cols=175 Identities=20% Similarity=0.261 Sum_probs=133.8
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--------CCCCeEEEEeeCCCChHHHHHHHc
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--------DNPSLQIVKADVTEGSAKLSEAIG 133 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~i~~Dl~d~~~~~~~~~~ 133 (252)
..+++|+|+||||+||||++++++|+++|++|+++.|+.+..+..... ...++.++.+|++| .+++.+++.
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d-~~~l~~~i~ 127 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTE-PESLHEAFD 127 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCC-HHHHHHHHH
Confidence 345689999999999999999999999999999988876543321110 01358899999999 888999999
Q ss_pred CCCcEEEEcCCCCCCC----CCCCcceehHHHHHHHHHHHHhc-CCCEEEEEccc--eeeccC--CC--CCCCcch----
Q 025456 134 DDSEAVVCATGFQPGW----DLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSI--LVNGAA--MG--QILNPAY---- 198 (252)
Q Consensus 134 ~~~d~vi~~ag~~~~~----~~~~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~--~v~~~~--~~--~~~~~~~---- 198 (252)
+ +|.|||+++..... .+....++|+.++.+++++|++. ++++||++||. .+|+.. .. ...++..
T Consensus 128 ~-~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~ 206 (367)
T PLN02686 128 G-CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDE 206 (367)
T ss_pred h-ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCCh
Confidence 8 99999999864322 12345678999999999999886 79999999996 467642 11 1122211
Q ss_pred -hccchhhHHHHHHHHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 199 -IFLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 199 -~~~~~~~~y~~sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
.+.++...|+.+|.++|++++ ++|++++++||++++|+..
T Consensus 207 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~ 251 (367)
T PLN02686 207 SFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGF 251 (367)
T ss_pred hhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCC
Confidence 223455679999999998874 4699999999999999964
No 26
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.92 E-value=4.9e-25 Score=181.34 Aligned_cols=165 Identities=30% Similarity=0.388 Sum_probs=137.2
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcCCCCC
Q 025456 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGFQP 147 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ag~~~ 147 (252)
|+||||+||||++++++|+++|++|+.+.|+......... ..+++++.+|+.| .+.+.+++.. .+|+|||+|+...
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~--~~~~~~~~~dl~~-~~~~~~~~~~~~~d~vi~~a~~~~ 77 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK--KLNVEFVIGDLTD-KEQLEKLLEKANIDVVIHLAAFSS 77 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH--HTTEEEEESETTS-HHHHHHHHHHHTESEEEEEBSSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc--cceEEEEEeeccc-cccccccccccCceEEEEeecccc
Confidence 7999999999999999999999999988888765432111 1279999999999 8889998876 3699999998752
Q ss_pred ----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHH----
Q 025456 148 ----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR---- 219 (252)
Q Consensus 148 ----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~---- 219 (252)
..+....++.|+.++.+++++|++.+++++|++||..+|+...+.+.++.... ++.+.|+.+|...|++++
T Consensus 78 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~-~~~~~Y~~~K~~~e~~~~~~~~ 156 (236)
T PF01370_consen 78 NPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPI-NPLSPYGASKRAAEELLRDYAK 156 (236)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGC-CHSSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccc
Confidence 12445667899999999999999999999999999999998855555554444 778889999999998875
Q ss_pred HcCCcEEEEeCCcccCCC
Q 025456 220 KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 220 ~~gi~~~~lrPg~i~~~~ 237 (252)
+.+++++++||+.++|+.
T Consensus 157 ~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 157 KYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHTSEEEEEEESEEESTT
T ss_pred cccccccccccccccccc
Confidence 358999999999999998
No 27
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.92 E-value=2.5e-24 Score=185.44 Aligned_cols=150 Identities=31% Similarity=0.439 Sum_probs=124.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~ 146 (252)
|+|+|||||||||++++++|+++|++|++++|+.+...... ..+++++.+|++| .+++.+++.+ +|+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~---~~~v~~v~~Dl~d-~~~l~~al~g-~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK---EWGAELVYGDLSL-PETLPPSFKG-VTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh---hcCCEEEECCCCC-HHHHHHHHCC-CCEEEECCCCC
Confidence 48999999999999999999999999999999875543211 2468999999999 8899999999 99999998743
Q ss_pred CCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHcCCcEE
Q 025456 147 PGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYT 226 (252)
Q Consensus 147 ~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ 226 (252)
. .+.....++|+.++.+++++|+++++++||++||.+++.. +...|..+|..+|+++++.+++++
T Consensus 76 ~-~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~--------------~~~~~~~~K~~~e~~l~~~~l~~t 140 (317)
T CHL00194 76 P-SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY--------------PYIPLMKLKSDIEQKLKKSGIPYT 140 (317)
T ss_pred C-CCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc--------------CCChHHHHHHHHHHHHHHcCCCeE
Confidence 2 3445677899999999999999999999999999643210 113467889999999999999999
Q ss_pred EEeCCcccCC
Q 025456 227 IIRPGGLRNE 236 (252)
Q Consensus 227 ~lrPg~i~~~ 236 (252)
++||+.+++.
T Consensus 141 ilRp~~~~~~ 150 (317)
T CHL00194 141 IFRLAGFFQG 150 (317)
T ss_pred EEeecHHhhh
Confidence 9999987754
No 28
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.92 E-value=1.8e-24 Score=179.38 Aligned_cols=176 Identities=21% Similarity=0.226 Sum_probs=145.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh----hh--ccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA----KT--TLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEA 138 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~----~~--~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~ 138 (252)
.++||||||+||||+|.+-+|+++|+.|++++.-.... .. .+-....++.++++|++| ...+++.|+. ++|.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D-~~~L~kvF~~~~fd~ 80 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLND-AEALEKLFSEVKFDA 80 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCC-HHHHHHHHhhcCCce
Confidence 57999999999999999999999999999987532221 11 111134789999999999 8999999986 7999
Q ss_pred EEEcCCCCC----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHH
Q 025456 139 VVCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA 214 (252)
Q Consensus 139 vi~~ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~ 214 (252)
|+|.|+... -.++..++..|+.|+.++++.|++++++.+||.||+.+||....-|..+......+.+.|+.+|.+.
T Consensus 81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~i 160 (343)
T KOG1371|consen 81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAI 160 (343)
T ss_pred EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHH
Confidence 999997644 2467788899999999999999999999999999999999987777666554445889999999999
Q ss_pred HHHHHH----cCCcEEEEeCCcccCCCCCCce
Q 025456 215 EQYIRK----SGINYTIIRPGGLRNEPPTGNI 242 (252)
Q Consensus 215 e~~~~~----~gi~~~~lrPg~i~~~~~~~~~ 242 (252)
|+.... .++.++.||..+++|....|.+
T Consensus 161 E~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ 192 (343)
T KOG1371|consen 161 EEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRI 192 (343)
T ss_pred HHHHHhhhccccceEEEEEeccccCccccCcc
Confidence 998864 4689999999999996655544
No 29
>PLN02240 UDP-glucose 4-epimerase
Probab=99.92 E-value=4.4e-24 Score=186.21 Aligned_cols=173 Identities=21% Similarity=0.217 Sum_probs=135.0
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh-------hhccccCCCCeEEEEeeCCCChHHHHHHHcC-
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-------KTTLSKDNPSLQIVKADVTEGSAKLSEAIGD- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~- 134 (252)
++++++|+||||+||||++++++|+++|++|++++|..... .........++.++.+|++| .+++.+++.+
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~l~~~~~~~ 80 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRD-KEALEKVFAST 80 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCC-HHHHHHHHHhC
Confidence 45679999999999999999999999999999998753211 11111112468899999999 7888888763
Q ss_pred CCcEEEEcCCCCCC----CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHH
Q 025456 135 DSEAVVCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA 210 (252)
Q Consensus 135 ~~d~vi~~ag~~~~----~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~s 210 (252)
.+|+|||+|+.... .++...+++|+.++.+++++|++.++++||++||..+|+...+.+.++. .+.++...|+.+
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-~~~~~~~~Y~~s 159 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEE-FPLSATNPYGRT 159 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-CCCCCCCHHHHH
Confidence 48999999986431 2344568899999999999999999899999999999986544444443 345567889999
Q ss_pred HHHHHHHHHH-----cCCcEEEEeCCcccCCC
Q 025456 211 KLQAEQYIRK-----SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 211 K~~~e~~~~~-----~gi~~~~lrPg~i~~~~ 237 (252)
|.++|++++. .+++++++|+++++|+.
T Consensus 160 K~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~ 191 (352)
T PLN02240 160 KLFIEEICRDIHASDPEWKIILLRYFNPVGAH 191 (352)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEeecCcCCCC
Confidence 9999998752 46889999999998864
No 30
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.92 E-value=1.4e-24 Score=193.97 Aligned_cols=166 Identities=21% Similarity=0.273 Sum_probs=128.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc--cCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
+.|+|+||||+||||++|+++|+++|++|++++|.......... ....+++++.+|+.+ . .+.+ +|+|||+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~-~-----~~~~-~D~ViHl 191 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVE-P-----ILLE-VDQIYHL 191 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccc-c-----cccC-CCEEEEC
Confidence 45899999999999999999999999999999875322111110 012467888889877 3 2456 9999999
Q ss_pred CCCCC----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcch----hccchhhHHHHHHHHH
Q 025456 143 TGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAY----IFLNVFGLTLIAKLQA 214 (252)
Q Consensus 143 ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~----~~~~~~~~y~~sK~~~ 214 (252)
|+... ..++...+++|+.|+.+++++|++.++ +||++||..+||...+.+.++.. .+..+...|+.+|.++
T Consensus 192 Aa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~a 270 (436)
T PLN02166 192 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA 270 (436)
T ss_pred ceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHH
Confidence 98543 124456678999999999999999886 89999999999876544444432 2445567899999999
Q ss_pred HHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 215 EQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 215 e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
|++++ ..+++++++||+++||+..
T Consensus 271 E~~~~~y~~~~~l~~~ilR~~~vYGp~~ 298 (436)
T PLN02166 271 ETLAMDYHRGAGVEVRIARIFNTYGPRM 298 (436)
T ss_pred HHHHHHHHHHhCCCeEEEEEccccCCCC
Confidence 98775 3589999999999999863
No 31
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.92 E-value=3e-24 Score=187.60 Aligned_cols=171 Identities=16% Similarity=0.153 Sum_probs=128.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEe-ecCchhh--hhccc-cCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKA--KTTLS-KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVV 140 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~-~r~~~~~--~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi 140 (252)
|++|+|||||||||+++++.|+++|++|+++ +|..... ..... ....++.++.+|++| .+++.+++.+ ++|+||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~D~Vi 79 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD-RAELARVFTEHQPDCVM 79 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcC-hHHHHHHHhhcCCCEEE
Confidence 4789999999999999999999999876544 4432211 11111 012357889999999 7888888874 489999
Q ss_pred EcCCCCCC----CCCCCcceehHHHHHHHHHHHHh---------cCCCEEEEEccceeeccCCC--CCCCcchhccchhh
Q 025456 141 CATGFQPG----WDLFAPWKVDNFGTVNLVEACRK---------RGVNRFILISSILVNGAAMG--QILNPAYIFLNVFG 205 (252)
Q Consensus 141 ~~ag~~~~----~~~~~~~~~n~~g~~~ll~~~~~---------~~~~~~v~~SS~~v~~~~~~--~~~~~~~~~~~~~~ 205 (252)
|+||.... .++...+++|+.|+.+++++|++ .++++||++||..+|+...+ .+..+. .+..+.+
T Consensus 80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~-~~~~p~s 158 (355)
T PRK10217 80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET-TPYAPSS 158 (355)
T ss_pred ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC-CCCCCCC
Confidence 99986432 24556789999999999999976 24679999999999985422 223332 2345567
Q ss_pred HHHHHHHHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 206 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 206 ~y~~sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
.|+.+|.++|.+++ +.+++++++||++++|+..
T Consensus 159 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 159 PYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 89999999997764 4689999999999999875
No 32
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.92 E-value=4.5e-24 Score=174.79 Aligned_cols=170 Identities=22% Similarity=0.147 Sum_probs=136.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecC-----chhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcE
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRD-----LDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEA 138 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~-----~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~ 138 (252)
|++|||||.||||+++++.++++. ++|+.++.= .+.+.... ..++..++++||+| .+.+.+++.. ++|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~--~~~~~~fv~~DI~D-~~~v~~~~~~~~~D~ 77 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE--DSPRYRFVQGDICD-RELVDRLFKEYQPDA 77 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh--cCCCceEEeccccC-HHHHHHHHHhcCCCe
Confidence 589999999999999999999875 346666542 12222211 44689999999999 8999999985 5999
Q ss_pred EEEcCCCCC----CCCCCCcceehHHHHHHHHHHHHhcCCC-EEEEEccceeeccCCCC-CCCcchhccchhhHHHHHHH
Q 025456 139 VVCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILISSILVNGAAMGQ-ILNPAYIFLNVFGLTLIAKL 212 (252)
Q Consensus 139 vi~~ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~SS~~v~~~~~~~-~~~~~~~~~~~~~~y~~sK~ 212 (252)
|+|.|+-.+ -.++..++++|+.||.+|||++++...+ ||+++|+-.|||+.... +...+..+.+|.++|.+||+
T Consensus 78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKA 157 (340)
T COG1088 78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKA 157 (340)
T ss_pred EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhh
Confidence 999998654 2356778899999999999999998754 89999999999986542 22334557788899999999
Q ss_pred HHHHHHH----HcCCcEEEEeCCcccCCCCC
Q 025456 213 QAEQYIR----KSGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 213 ~~e~~~~----~~gi~~~~lrPg~i~~~~~~ 239 (252)
+++.+++ .+|+++++.|+++-|||...
T Consensus 158 asD~lVray~~TYglp~~ItrcSNNYGPyqf 188 (340)
T COG1088 158 ASDLLVRAYVRTYGLPATITRCSNNYGPYQF 188 (340)
T ss_pred hHHHHHHHHHHHcCCceEEecCCCCcCCCcC
Confidence 9998775 47999999999999998643
No 33
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.92 E-value=2e-24 Score=193.16 Aligned_cols=165 Identities=21% Similarity=0.270 Sum_probs=127.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc-c-cCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL-S-KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
++|+|+||||+||||++|+++|+++|++|++++|......+.. . -...+++++.+|+.+ . .+.+ +|+|||+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~-~-----~l~~-~D~ViHl 190 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVE-P-----ILLE-VDQIYHL 190 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccC-h-----hhcC-CCEEEEe
Confidence 5689999999999999999999999999999887533221111 0 023468888999877 3 2456 9999999
Q ss_pred CCCCC----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcch----hccchhhHHHHHHHHH
Q 025456 143 TGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAY----IFLNVFGLTLIAKLQA 214 (252)
Q Consensus 143 ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~----~~~~~~~~y~~sK~~~ 214 (252)
|+... ..++...+++|+.++.+++++|++.++ +||++||..+|+.....+..+.+ .+..+.+.|+.+|.++
T Consensus 191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~a 269 (442)
T PLN02206 191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTA 269 (442)
T ss_pred eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHH
Confidence 98543 224556678999999999999999996 99999999999865444443432 2344457899999999
Q ss_pred HHHHH----HcCCcEEEEeCCcccCCC
Q 025456 215 EQYIR----KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 215 e~~~~----~~gi~~~~lrPg~i~~~~ 237 (252)
|+++. .++++++++||+++||+.
T Consensus 270 E~~~~~y~~~~g~~~~ilR~~~vyGp~ 296 (442)
T PLN02206 270 ETLTMDYHRGANVEVRIARIFNTYGPR 296 (442)
T ss_pred HHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 98775 368999999999999986
No 34
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.92 E-value=4.4e-24 Score=185.19 Aligned_cols=170 Identities=19% Similarity=0.212 Sum_probs=131.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhc---ccc-CCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEE
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSK-DNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC 141 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~---~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~ 141 (252)
|+|+||||+||||++++++|+++|++|++++|........ +.. ...++.++.+|++| .+.+.+++.. ++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vvh 79 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN-EALLTEILHDHAIDTVIH 79 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCC-HHHHHHHHhcCCCCEEEE
Confidence 4799999999999999999999999999987643221111 110 12357888999999 7888888763 4999999
Q ss_pred cCCCCCC----CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHH
Q 025456 142 ATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY 217 (252)
Q Consensus 142 ~ag~~~~----~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~ 217 (252)
+|+.... .+..+.+++|+.++.+++++|++.++++||++||..+|+.....+.++.....++...|+.+|.++|++
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~ 159 (338)
T PRK10675 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQI 159 (338)
T ss_pred CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHH
Confidence 9986532 233456789999999999999999999999999999998654444444433335678899999999988
Q ss_pred HHH-----cCCcEEEEeCCcccCCC
Q 025456 218 IRK-----SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 218 ~~~-----~gi~~~~lrPg~i~~~~ 237 (252)
++. .+++++++|++.++|+.
T Consensus 160 ~~~~~~~~~~~~~~ilR~~~v~g~~ 184 (338)
T PRK10675 160 LTDLQKAQPDWSIALLRYFNPVGAH 184 (338)
T ss_pred HHHHHHhcCCCcEEEEEeeeecCCC
Confidence 763 37899999999888864
No 35
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.92 E-value=6.8e-24 Score=182.89 Aligned_cols=167 Identities=25% Similarity=0.310 Sum_probs=134.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~ 146 (252)
|+|+||||+||||+++++.|+++|++|++++|+++..... ...+++++.+|++| .+++.+++.+ +|+|||+++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~D~~~-~~~l~~~~~~-~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL---EGLDVEIVEGDLRD-PASLRKAVAG-CRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc---ccCCceEEEeeCCC-HHHHHHHHhC-CCEEEEeceec
Confidence 4799999999999999999999999999999986543221 12368899999999 8899999998 99999999754
Q ss_pred C--CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccC-CCCCCCcchh--ccchhhHHHHHHHHHHHHHHH-
Q 025456 147 P--GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAA-MGQILNPAYI--FLNVFGLTLIAKLQAEQYIRK- 220 (252)
Q Consensus 147 ~--~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~-~~~~~~~~~~--~~~~~~~y~~sK~~~e~~~~~- 220 (252)
. ..++...+++|+.++.++++++++.++++||++||..+|+.. .+.+.++... +....+.|+.+|.++|++++.
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 155 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEM 155 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHH
Confidence 3 234456688999999999999999999999999999999853 2333333221 112246799999999988764
Q ss_pred ---cCCcEEEEeCCcccCCCC
Q 025456 221 ---SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 221 ---~gi~~~~lrPg~i~~~~~ 238 (252)
.+++++++||+.++|+..
T Consensus 156 ~~~~~~~~~ilR~~~~~G~~~ 176 (328)
T TIGR03466 156 AAEKGLPVVIVNPSTPIGPRD 176 (328)
T ss_pred HHhcCCCEEEEeCCccCCCCC
Confidence 589999999999999864
No 36
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.92 E-value=6.6e-24 Score=181.70 Aligned_cols=170 Identities=22% Similarity=0.293 Sum_probs=133.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhh--h-ccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAK--T-TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~--~-~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
++.+++||||+||+|++++++|++++ .+|++++..+.... . ........++++++|+.| ...+.+++.+ + .|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~-~~~i~~a~~~-~-~V 79 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLD-ANSISNAFQG-A-VV 79 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhh-hhhhhhhccC-c-eE
Confidence 57899999999999999999999988 78999888764211 1 111125679999999999 8889999999 8 77
Q ss_pred EEcCCCCC----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCC---CCcchhccchhhHHHHHHH
Q 025456 140 VCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQI---LNPAYIFLNVFGLTLIAKL 212 (252)
Q Consensus 140 i~~ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~---~~~~~~~~~~~~~y~~sK~ 212 (252)
+|+|+... ..+.+..+++|+.||.+++++|++.+++++||+||..|........ .+.++ +.+....|..+|+
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~-p~~~~d~Y~~sKa 158 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPY-PLKHIDPYGESKA 158 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCC-ccccccccchHHH
Confidence 77765432 2357788999999999999999999999999999999865433211 11222 2455578999999
Q ss_pred HHHHHHHHc----CCcEEEEeCCcccCCCC
Q 025456 213 QAEQYIRKS----GINYTIIRPGGLRNEPP 238 (252)
Q Consensus 213 ~~e~~~~~~----gi~~~~lrPg~i~~~~~ 238 (252)
.+|+++.+. ++..++|||..|||++.
T Consensus 159 ~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd 188 (361)
T KOG1430|consen 159 LAEKLVLEANGSDDLYTCALRPPGIYGPGD 188 (361)
T ss_pred HHHHHHHHhcCCCCeeEEEEccccccCCCC
Confidence 999998753 38899999999999975
No 37
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.91 E-value=2.9e-23 Score=164.73 Aligned_cols=152 Identities=34% Similarity=0.498 Sum_probs=129.2
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCCCCCC
Q 025456 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPG 148 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~ 148 (252)
|+|+||||++|++++++|+++|++|++++|++++.++ ..+++++++|+.| .+++.+++.+ +|+||+++|....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----~~~~~~~~~d~~d-~~~~~~al~~-~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----SPGVEIIQGDLFD-PDSVKAALKG-ADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----CTTEEEEESCTTC-HHHHHHHHTT-SSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----ccccccceeeehh-hhhhhhhhhh-cchhhhhhhhhcc
Confidence 7999999999999999999999999999999887665 4789999999999 8999999999 9999999976443
Q ss_pred CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHcCCcEEEE
Q 025456 149 WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTII 228 (252)
Q Consensus 149 ~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~~l 228 (252)
+...+.+++++|++.+++++|++|+.++|........ ......+..|...|..+|+++++.+++|+++
T Consensus 74 ---------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~e~~~~~~~~~~~iv 141 (183)
T PF13460_consen 74 ---------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFS---DEDKPIFPEYARDKREAEEALRESGLNWTIV 141 (183)
T ss_dssp ---------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEE---GGTCGGGHHHHHHHHHHHHHHHHSTSEEEEE
T ss_pred ---------cccccccccccccccccccceeeeccccCCCCCcccc---cccccchhhhHHHHHHHHHHHHhcCCCEEEE
Confidence 2778999999999999999999999988775433211 1112233678899999999999999999999
Q ss_pred eCCcccCCCCC
Q 025456 229 RPGGLRNEPPT 239 (252)
Q Consensus 229 rPg~i~~~~~~ 239 (252)
||+.++++...
T Consensus 142 rp~~~~~~~~~ 152 (183)
T PF13460_consen 142 RPGWIYGNPSR 152 (183)
T ss_dssp EESEEEBTTSS
T ss_pred ECcEeEeCCCc
Confidence 99999998855
No 38
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.91 E-value=8.7e-24 Score=183.68 Aligned_cols=172 Identities=17% Similarity=0.156 Sum_probs=133.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh-----hhccc---cCCCCeEEEEeeCCCChHHHHHHHcC-
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-----KTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-----~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~- 134 (252)
.++++|+||||+||||++++++|+++|++|++++|+.+.. +.... ....++.++.+|++| .+++.+++..
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~ 82 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSD-ASSLRRWLDDI 82 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCC-HHHHHHHHHHc
Confidence 4578999999999999999999999999999999875421 11110 012458899999999 8888888875
Q ss_pred CCcEEEEcCCCCCC----CCCCCcceehHHHHHHHHHHHHhcCCC-----EEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 135 DSEAVVCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVN-----RFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 135 ~~d~vi~~ag~~~~----~~~~~~~~~n~~g~~~ll~~~~~~~~~-----~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
++|+|||+|+.... .++...+++|+.|+.+++++|++.+++ +||++||..+||.... +..+. .+..+.+
T Consensus 83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~-~~~~p~~ 160 (340)
T PLN02653 83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSET-TPFHPRS 160 (340)
T ss_pred CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCC-CCCCCCC
Confidence 37999999997432 234455689999999999999988864 8999999999987543 33332 3456678
Q ss_pred HHHHHHHHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 206 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 206 ~y~~sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
.|+.+|.++|.+++ +++++++..|+.+++++..
T Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~ 197 (340)
T PLN02653 161 PYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRR 197 (340)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCC
Confidence 89999999998874 4588888888888888753
No 39
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.91 E-value=2.6e-24 Score=179.19 Aligned_cols=169 Identities=23% Similarity=0.272 Sum_probs=107.5
Q ss_pred EEcCCChHHHHHHHHHHHCCC--eEEEeecCchhh---hhc---ccc----------CCCCeEEEEeeCCCC-----hHH
Q 025456 71 VAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKA---KTT---LSK----------DNPSLQIVKADVTEG-----SAK 127 (252)
Q Consensus 71 VtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~---~~~---~~~----------~~~~~~~i~~Dl~d~-----~~~ 127 (252)
|||||||||++|+++|++++. +|++++|..+.. +.+ +.. ...+++++.+|++++ .+.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999876 899999986431 111 110 157899999999983 244
Q ss_pred HHHHHcCCCcEEEEcCCCCC-CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCC--------CCcch
Q 025456 128 LSEAIGDDSEAVVCATGFQP-GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQI--------LNPAY 198 (252)
Q Consensus 128 ~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~--------~~~~~ 198 (252)
..+.... +|+|||||+... ..+..+..++|+.|+.++++.|.+.+.++|+|+||..+.+...+.. ..+..
T Consensus 81 ~~~L~~~-v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~ 159 (249)
T PF07993_consen 81 YQELAEE-VDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLD 159 (249)
T ss_dssp HHHHHHH---EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE
T ss_pred hhccccc-cceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccch
Confidence 5555566 999999998655 3355567899999999999999977666999999965554443221 11112
Q ss_pred hccchhhHHHHHHHHHHHHHHH----cCCcEEEEeCCcccCCCCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIRK----SGINYTIIRPGGLRNEPPTG 240 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~~----~gi~~~~lrPg~i~~~~~~~ 240 (252)
......+.|.+||+.+|+++++ .|++++++|||.|.|...+|
T Consensus 160 ~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G 205 (249)
T PF07993_consen 160 PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTG 205 (249)
T ss_dssp --TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS
T ss_pred hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCc
Confidence 2334456899999999998864 39999999999999977665
No 40
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.91 E-value=1.2e-23 Score=178.32 Aligned_cols=150 Identities=26% Similarity=0.309 Sum_probs=125.6
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcCCCC
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGFQ 146 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ag~~ 146 (252)
+|+||||+||||++++++|+++|++|++++|. .+|+.| .+++.+++.+ ++|+|||+++..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------~~d~~~-~~~~~~~~~~~~~d~vi~~a~~~ 61 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------QLDLTD-PEALERLLRAIRPDAVVNTAAYT 61 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------ccCCCC-HHHHHHHHHhCCCCEEEECCccc
Confidence 58999999999999999999999999998874 368888 8889988886 369999999864
Q ss_pred CCC----CCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHcC
Q 025456 147 PGW----DLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSG 222 (252)
Q Consensus 147 ~~~----~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~g 222 (252)
... .+...+++|+.++.+++++|++.+. +||++||.++|+...+.+.++.. +.++.+.|+.+|..+|++++..+
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~-~~~~~~~Y~~~K~~~E~~~~~~~ 139 (287)
T TIGR01214 62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDD-ATNPLNVYGQSKLAGEQAIRAAG 139 (287)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCC-CCCCcchhhHHHHHHHHHHHHhC
Confidence 321 2334678999999999999998885 89999999999765444554443 34567889999999999999889
Q ss_pred CcEEEEeCCcccCCCC
Q 025456 223 INYTIIRPGGLRNEPP 238 (252)
Q Consensus 223 i~~~~lrPg~i~~~~~ 238 (252)
.+++++||+.++|+..
T Consensus 140 ~~~~ilR~~~v~G~~~ 155 (287)
T TIGR01214 140 PNALIVRTSWLYGGGG 155 (287)
T ss_pred CCeEEEEeeecccCCC
Confidence 9999999999999874
No 41
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.91 E-value=6e-23 Score=181.36 Aligned_cols=157 Identities=29% Similarity=0.440 Sum_probs=127.0
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh-----ccccCCCCeEEEEeeCCCChHHHHHHHcC---
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-----TLSKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-----~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--- 134 (252)
..++++|+||||||+||++++++|+++|++|++++|+.+.... .......+++++.+|++| .+++.+++.+
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~~~~ 135 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFSEGD 135 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHHhCC
Confidence 3468899999999999999999999999999999998754321 011123478999999999 8889888873
Q ss_pred CCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHH
Q 025456 135 DSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA 214 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~ 214 (252)
++|+||||++.... .....+++|+.++.+++++|++.++++||++||.++++ +...|..+|..+
T Consensus 136 ~~D~Vi~~aa~~~~-~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~---------------p~~~~~~sK~~~ 199 (390)
T PLN02657 136 PVDVVVSCLASRTG-GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK---------------PLLEFQRAKLKF 199 (390)
T ss_pred CCcEEEECCccCCC-CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC---------------cchHHHHHHHHH
Confidence 39999999885332 23456788999999999999999999999999987652 134567899999
Q ss_pred HHHHHH--cCCcEEEEeCCcccCC
Q 025456 215 EQYIRK--SGINYTIIRPGGLRNE 236 (252)
Q Consensus 215 e~~~~~--~gi~~~~lrPg~i~~~ 236 (252)
|+.++. .+++++++||+.+++.
T Consensus 200 E~~l~~~~~gl~~tIlRp~~~~~~ 223 (390)
T PLN02657 200 EAELQALDSDFTYSIVRPTAFFKS 223 (390)
T ss_pred HHHHHhccCCCCEEEEccHHHhcc
Confidence 988875 7999999999998865
No 42
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.90 E-value=1.7e-23 Score=168.21 Aligned_cols=159 Identities=21% Similarity=0.191 Sum_probs=125.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCC-CCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN-PSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
++|.++|||||++||.+++++|+++|++|++..|+.++++++..... ..+..+..|++| .+++.+++.. ++|
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCccc
Confidence 57999999999999999999999999999999999998877554333 468899999999 6665544431 499
Q ss_pred EEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 138 ~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
++|||||.... .+|+.++++|+.|..+..++. .+++.++||++||++..- ++...+
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~------------~y~~~~ 151 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY------------PYPGGA 151 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc------------cCCCCc
Confidence 99999997552 468889999999988877775 566667999999986311 112236
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCC
Q 025456 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNE 236 (252)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~ 236 (252)
.|+.+|++..++.+ ..+++++.|.||.+.+.
T Consensus 152 vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~ 189 (246)
T COG4221 152 VYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETT 189 (246)
T ss_pred cchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecce
Confidence 78999998887643 25899999999988543
No 43
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.90 E-value=2.6e-23 Score=195.59 Aligned_cols=172 Identities=19% Similarity=0.228 Sum_probs=132.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHC--CCeEEEeecCc--hhhhhcccc-CCCCeEEEEeeCCCChHHHHHHH--cCCCc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDL--DKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAI--GDDSE 137 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~--~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~--~~~~d 137 (252)
++|+|+|||||||||++++++|+++ |++|++++|.. +........ ...+++++.+|++| .+.+.+.+ .+ +|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~~~~~~~~~~~-~D 82 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS-ADLVNYLLITEG-ID 82 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCC-hHHHHHHHhhcC-CC
Confidence 4689999999999999999999998 68999888753 111111111 23578999999999 77777665 45 99
Q ss_pred EEEEcCCCCCC----CCCCCcceehHHHHHHHHHHHHhcC-CCEEEEEccceeeccCCCCCC--CcchhccchhhHHHHH
Q 025456 138 AVVCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAAMGQIL--NPAYIFLNVFGLTLIA 210 (252)
Q Consensus 138 ~vi~~ag~~~~----~~~~~~~~~n~~g~~~ll~~~~~~~-~~~~v~~SS~~v~~~~~~~~~--~~~~~~~~~~~~y~~s 210 (252)
+|||+|+.... .+..+.+++|+.++.+++++|++.+ +++|||+||..+||.....+. ..+..+..+.+.|+.+
T Consensus 83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~s 162 (668)
T PLN02260 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSAT 162 (668)
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHH
Confidence 99999987542 2334567899999999999999987 789999999999986543221 1122234456789999
Q ss_pred HHHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 211 KLQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 211 K~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
|.++|++++ +++++++++||+++||+..
T Consensus 163 K~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~ 194 (668)
T PLN02260 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence 999998875 3689999999999999875
No 44
>PRK06196 oxidoreductase; Provisional
Probab=99.90 E-value=9.3e-23 Score=175.51 Aligned_cols=175 Identities=15% Similarity=0.126 Sum_probs=125.8
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc------CC
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG------DD 135 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~------~~ 135 (252)
.++++++|+||||+|+||++++++|+++|++|++++|+.++.++.... ..++.++++|++| .+++.+++. ++
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~-l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~ 99 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAG-IDGVEVVMLDLAD-LESVRAFAERFLDSGRR 99 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hhhCeEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 345689999999999999999999999999999999998765543321 1247899999999 777766553 24
Q ss_pred CcEEEEcCCCCCC------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 136 SEAVVCATGFQPG------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 136 ~d~vi~~ag~~~~------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
+|+||||||.... .+++..+++|+.++.++++.+ ++.+.++||++||.................+..++.
T Consensus 100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
T PRK06196 100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWL 179 (315)
T ss_pred CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHH
Confidence 9999999996431 234556789999976666654 555557999999975422111000000012234567
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.|+.+|.+.+.+.+ +.|+++++++||++.++..
T Consensus 180 ~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~ 219 (315)
T PRK06196 180 AYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ 219 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence 89999999886653 3589999999999998853
No 45
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.90 E-value=1.9e-23 Score=179.07 Aligned_cols=161 Identities=19% Similarity=0.267 Sum_probs=117.6
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC--hHH-HHHHHcC----CCcEEEE
Q 025456 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAK-LSEAIGD----DSEAVVC 141 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~--~~~-~~~~~~~----~~d~vi~ 141 (252)
|+||||+||||++|+++|+++|++++++.|+...... ...+..+|+.|. .++ +.+++.+ ++|+|||
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih 74 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-------FVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFH 74 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-------HHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEE
Confidence 7999999999999999999999987777766432111 012234566551 222 3333321 3999999
Q ss_pred cCCCCCC--CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHH
Q 025456 142 ATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR 219 (252)
Q Consensus 142 ~ag~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~ 219 (252)
+||.... .+....++.|+.++.+++++|++.++ +||++||..+|+...+.+.++ ..+.++.+.|+.+|.++|++++
T Consensus 75 ~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E-~~~~~p~~~Y~~sK~~~E~~~~ 152 (308)
T PRK11150 75 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEE-REYEKPLNVYGYSKFLFDEYVR 152 (308)
T ss_pred CceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCcc-CCCCCCCCHHHHHHHHHHHHHH
Confidence 9985332 23334678999999999999999987 799999999998754333333 2345666789999999998776
Q ss_pred H----cCCcEEEEeCCcccCCCC
Q 025456 220 K----SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 220 ~----~gi~~~~lrPg~i~~~~~ 238 (252)
. .+++++++||++++|+..
T Consensus 153 ~~~~~~~~~~~~lR~~~vyG~~~ 175 (308)
T PRK11150 153 QILPEANSQICGFRYFNVYGPRE 175 (308)
T ss_pred HHHHHcCCCEEEEeeeeecCCCC
Confidence 4 589999999999999864
No 46
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.90 E-value=4.4e-23 Score=170.04 Aligned_cols=163 Identities=19% Similarity=0.249 Sum_probs=126.9
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc----CCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
.+++++++|||||++||.+++++|+++|++|+++.|+.++++++..+ .+-.++++.+|+++ .+++.+....
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~-~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSD-PEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC-hhHHHHHHHHHHhc
Confidence 34689999999999999999999999999999999999988765432 23467899999999 6666655431
Q ss_pred --CCcEEEEcCCCCCCC-----C---CCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 135 --DSEAVVCATGFQPGW-----D---LFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 135 --~~d~vi~~ag~~~~~-----~---~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
.+|++|||||..... + .++++++|+.+...+..+. .+.+.++||+++|...+-.
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p------------ 149 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP------------ 149 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC------------
Confidence 499999999976532 2 2356789999976665554 6777789999999865422
Q ss_pred cchhhHHHHHHHHHHHHH-------HHcCCcEEEEeCCcccCCCC
Q 025456 201 LNVFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~-------~~~gi~~~~lrPg~i~~~~~ 238 (252)
....+.|+++|+..-.+. +..|++|+.+.||.+.++..
T Consensus 150 ~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~ 194 (265)
T COG0300 150 TPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFF 194 (265)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccc
Confidence 223578999999765432 35799999999999999865
No 47
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.90 E-value=8.2e-23 Score=178.30 Aligned_cols=170 Identities=18% Similarity=0.149 Sum_probs=127.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCe-EEEeecCch--hhhhccc-cCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEE
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLD--KAKTTLS-KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC 141 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~--~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~ 141 (252)
|+|+||||+||||++|+++|+++|++ |+++++... ....... ....+++++.+|++| .+++.+++.+ .+|+|||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICD-RAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCC-HHHHHHHHHhcCCCEEEE
Confidence 47999999999999999999999976 554444321 1111110 012457889999999 8888888864 4899999
Q ss_pred cCCCCC----CCCCCCcceehHHHHHHHHHHHHhc---------CCCEEEEEccceeeccCCC----------CCCCcch
Q 025456 142 ATGFQP----GWDLFAPWKVDNFGTVNLVEACRKR---------GVNRFILISSILVNGAAMG----------QILNPAY 198 (252)
Q Consensus 142 ~ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~---------~~~~~v~~SS~~v~~~~~~----------~~~~~~~ 198 (252)
+||... ..+++..+++|+.|+.+++++|++. ++++||++||..+|+.... .+..+ .
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E-~ 158 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE-T 158 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc-c
Confidence 998643 2345678899999999999999864 4568999999999985311 01122 2
Q ss_pred hccchhhHHHHHHHHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
.+.++.+.|+.+|.++|.+++ .++++++++||+.++|+..
T Consensus 159 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~ 202 (352)
T PRK10084 159 TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH 202 (352)
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence 244667889999999998774 3689999999999999874
No 48
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.90 E-value=5.9e-23 Score=173.56 Aligned_cols=160 Identities=21% Similarity=0.262 Sum_probs=124.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCcE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d~ 138 (252)
.+++++||||+|+||++++++|+++|++|++++|+++....+......++..+.+|++| .+++.+.+.+ .+|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCCE
Confidence 46899999999999999999999999999999999876654433233568889999999 7776665542 3899
Q ss_pred EEEcCCCCCCC--------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccchhhH
Q 025456 139 VVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (252)
Q Consensus 139 vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~ 206 (252)
||||||..... ++...+++|+.|+.++++++ ++.+.++||++||...+... .+...
T Consensus 82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~------------~~~~~ 149 (277)
T PRK06180 82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM------------PGIGY 149 (277)
T ss_pred EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC------------CCcch
Confidence 99999975421 23345789999999999985 44556799999998654221 13467
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 207 y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
|+.+|++.|.+++ .+|+++++++||.+.++.
T Consensus 150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 187 (277)
T PRK06180 150 YCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDW 187 (277)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence 8999998887654 258999999999998864
No 49
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.90 E-value=1.2e-22 Score=174.12 Aligned_cols=168 Identities=23% Similarity=0.198 Sum_probs=128.6
Q ss_pred EEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCch--hhhh--ccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEE
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLD--KAKT--TLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVV 140 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~--~~~~--~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi 140 (252)
+|+||||||+||++++++|+++| ++|++++|... ..+. .+. ...+++++.+|++| .+++.+++++ ++|+||
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~vi 78 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE-DNPRYRFVKGDIGD-RELVSRLFTEHQPDAVV 78 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc-cCCCcEEEEcCCcC-HHHHHHHHhhcCCCEEE
Confidence 58999999999999999999987 78988876421 1111 111 12468899999999 8888888875 589999
Q ss_pred EcCCCCCC----CCCCCcceehHHHHHHHHHHHHhcCCC-EEEEEccceeeccCCCC-CCCcchhccchhhHHHHHHHHH
Q 025456 141 CATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVN-RFILISSILVNGAAMGQ-ILNPAYIFLNVFGLTLIAKLQA 214 (252)
Q Consensus 141 ~~ag~~~~----~~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~SS~~v~~~~~~~-~~~~~~~~~~~~~~y~~sK~~~ 214 (252)
|+|+.... .++...+++|+.++.+++++|++.+.+ ++|++||..+|+..... +..+ ..+..+...|+.+|..+
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e-~~~~~~~~~Y~~sK~~~ 157 (317)
T TIGR01181 79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTE-TTPLAPSSPYSASKAAS 157 (317)
T ss_pred EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCC-CCCCCCCCchHHHHHHH
Confidence 99986431 244566789999999999999887543 89999999999865432 2222 22345567899999999
Q ss_pred HHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 215 EQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 215 e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
|.+++ +.+++++++||+.++|+..
T Consensus 158 e~~~~~~~~~~~~~~~i~R~~~i~G~~~ 185 (317)
T TIGR01181 158 DHLVRAYHRTYGLPALITRCSNNYGPYQ 185 (317)
T ss_pred HHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence 98765 4689999999999999864
No 50
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.90 E-value=1e-23 Score=178.89 Aligned_cols=150 Identities=24% Similarity=0.339 Sum_probs=116.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF 145 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ag~ 145 (252)
|+||||||+|+||++|++.|.++|++|+.+.|. ..|++| .+++.+.+.. ++|+||||||.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------~~dl~d-~~~~~~~~~~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------DLDLTD-PEAVAKLLEAFKPDVVINCAAY 61 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------CS-TTS-HHHHHHHHHHH--SEEEE----
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------hcCCCC-HHHHHHHHHHhCCCeEecccee
Confidence 699999999999999999999999999988765 478888 8888888875 69999999998
Q ss_pred CC----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHc
Q 025456 146 QP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS 221 (252)
Q Consensus 146 ~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~ 221 (252)
.. +.+++..+.+|+.++.++.++|++.++ ++||+||..||++..+.++.|.. +.+|.+.|+.+|.++|+.+++.
T Consensus 62 ~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d-~~~P~~~YG~~K~~~E~~v~~~ 139 (286)
T PF04321_consen 62 TNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDD-PPNPLNVYGRSKLEGEQAVRAA 139 (286)
T ss_dssp --HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS-----SSHHHHHHHHHHHHHHHH
T ss_pred ecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCC-CCCCCCHHHHHHHHHHHHHHHh
Confidence 65 235667789999999999999999997 99999999999777666655544 3477899999999999999886
Q ss_pred CCcEEEEeCCcccCCC
Q 025456 222 GINYTIIRPGGLRNEP 237 (252)
Q Consensus 222 gi~~~~lrPg~i~~~~ 237 (252)
.-++.++|+++++|+.
T Consensus 140 ~~~~~IlR~~~~~g~~ 155 (286)
T PF04321_consen 140 CPNALILRTSWVYGPS 155 (286)
T ss_dssp -SSEEEEEE-SEESSS
T ss_pred cCCEEEEecceecccC
Confidence 6699999999999984
No 51
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.90 E-value=1.1e-22 Score=172.66 Aligned_cols=175 Identities=19% Similarity=0.265 Sum_probs=133.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhh------hhccc-------cCCCCeEEEEeeCCCC-----hHH
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKA------KTTLS-------KDNPSLQIVKADVTEG-----SAK 127 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~------~~~~~-------~~~~~~~~i~~Dl~d~-----~~~ 127 (252)
++|++||||||+|++++++|+.+- .+|+|++|..+.. ++.+. ...++++++.+|+..+ ...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 579999999999999999999874 5999999987632 12121 1347899999999863 345
Q ss_pred HHHHHcCCCcEEEEcCCCCC-CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcc--------h
Q 025456 128 LSEAIGDDSEAVVCATGFQP-GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPA--------Y 198 (252)
Q Consensus 128 ~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~--------~ 198 (252)
..+..+. +|.||||++..+ -....+....|+.||..+++.|...+.|.+.|+||++++.........+. .
T Consensus 81 ~~~La~~-vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~ 159 (382)
T COG3320 81 WQELAEN-VDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRN 159 (382)
T ss_pred HHHHhhh-cceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccccc
Confidence 6666666 999999998544 44455667899999999999999888888999999998654332211111 1
Q ss_pred hccchhhHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCce
Q 025456 199 IFLNVFGLTLIAKLQAEQYIRK---SGINYTIIRPGGLRNEPPTGNI 242 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~~---~gi~~~~lrPg~i~~~~~~~~~ 242 (252)
......+.|++||+.+|.++++ .|++++++|||.|.++..+|.+
T Consensus 160 ~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~ 206 (382)
T COG3320 160 VGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGAL 206 (382)
T ss_pred ccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCcc
Confidence 1234457899999999999874 5899999999999999886643
No 52
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.90 E-value=4.6e-23 Score=176.20 Aligned_cols=151 Identities=19% Similarity=0.149 Sum_probs=120.6
Q ss_pred EEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcCCCCC-
Q 025456 70 FVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGFQP- 147 (252)
Q Consensus 70 lVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ag~~~- 147 (252)
|||||+||||++|++.|+++|++|+++.+. ..+|++| .+++.+.+.. ++|+|||+|+...
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------~~~Dl~~-~~~l~~~~~~~~~d~Vih~A~~~~~ 62 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------KELDLTR-QADVEAFFAKEKPTYVILAAAKVGG 62 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------ccCCCCC-HHHHHHHHhccCCCEEEEeeeeecc
Confidence 699999999999999999999988765432 1479999 7888888775 4899999998632
Q ss_pred ----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchh---ccchhh-HHHHHHHHHHHHHH
Q 025456 148 ----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI---FLNVFG-LTLIAKLQAEQYIR 219 (252)
Q Consensus 148 ----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~---~~~~~~-~y~~sK~~~e~~~~ 219 (252)
..++...+++|+.++.+++++|++.++++||++||..+|+.....+.+|... +..+.. .|+.+|.++|++++
T Consensus 63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~ 142 (306)
T PLN02725 63 IHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQ 142 (306)
T ss_pred cchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHH
Confidence 1345566789999999999999999999999999999998655555555431 233333 59999999997654
Q ss_pred ----HcCCcEEEEeCCcccCCCC
Q 025456 220 ----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 220 ----~~gi~~~~lrPg~i~~~~~ 238 (252)
..+++++++||+.++|+..
T Consensus 143 ~~~~~~~~~~~~~R~~~vyG~~~ 165 (306)
T PLN02725 143 AYRIQYGWDAISGMPTNLYGPHD 165 (306)
T ss_pred HHHHHhCCCEEEEEecceeCCCC
Confidence 4689999999999999864
No 53
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.2e-22 Score=171.53 Aligned_cols=159 Identities=27% Similarity=0.387 Sum_probs=122.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc------CCCcEE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG------DDSEAV 139 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~------~~~d~v 139 (252)
.++++||||+||||++++++|+++|++|++++|+++..+........++.++++|++| .+++.+.+. +++|+|
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999999999999999999999999999998876554333233578999999999 666665543 138999
Q ss_pred EEcCCCCCCC--------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHH
Q 025456 140 VCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (252)
Q Consensus 140 i~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y 207 (252)
|||||..... +++..+++|+.++.++++++ ++.+.++||++||...... ......|
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~~~~Y 148 (276)
T PRK06482 81 VSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA------------YPGFSLY 148 (276)
T ss_pred EECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC------------CCCCchh
Confidence 9999975421 23345779999999999997 5667789999999753211 1134689
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 208 ~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+.+|++.|.+++ .+|++++++|||.+.++.
T Consensus 149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~ 185 (276)
T PRK06482 149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNF 185 (276)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCC
Confidence 999999987664 258999999999986654
No 54
>PRK06182 short chain dehydrogenase; Validated
Probab=99.89 E-value=2.3e-22 Score=169.57 Aligned_cols=158 Identities=25% Similarity=0.350 Sum_probs=121.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc------CCCcE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG------DDSEA 138 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~------~~~d~ 138 (252)
++++++||||+|+||++++++|+++|++|++++|+.++.++... .+++++.+|++| .+++.+.+. +++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~---~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS---LGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---CCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 47899999999999999999999999999999999876654332 358899999999 777766654 13999
Q ss_pred EEEcCCCCCCC--------CCCCcceehHHHHHH----HHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhH
Q 025456 139 VVCATGFQPGW--------DLFAPWKVDNFGTVN----LVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (252)
Q Consensus 139 vi~~ag~~~~~--------~~~~~~~~n~~g~~~----ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~ 206 (252)
||||||..... +++..+++|+.++.+ +++.+++.+.++||++||...... ......
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~------------~~~~~~ 145 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY------------TPLGAW 145 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCC------------CCCccH
Confidence 99999975421 244567899988544 455667777789999999743211 112356
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 207 y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
|+.+|++.+.+.+ +.|+++++++||++.++..
T Consensus 146 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 184 (273)
T PRK06182 146 YHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG 184 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence 8999999987643 3689999999999998753
No 55
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=1.3e-22 Score=168.19 Aligned_cols=149 Identities=25% Similarity=0.301 Sum_probs=130.6
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcCCCC
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGFQ 146 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ag~~ 146 (252)
++||||++|.+|.+|++.|. .+++|+.++|.. +|++| .+.+.+.+.. ++|+|||+|++.
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------~Ditd-~~~v~~~i~~~~PDvVIn~AAyt 61 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAE------------------LDITD-PDAVLEVIRETRPDVVINAAAYT 61 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------ccccC-hHHHHHHHHhhCCCEEEECcccc
Confidence 49999999999999999998 678999887752 79999 8999999987 699999999986
Q ss_pred C----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHcC
Q 025456 147 P----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSG 222 (252)
Q Consensus 147 ~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~g 222 (252)
. +.+++..+.+|..|+.++.++|++.|. ++||+||-+|+.+..+.++.|.+ +.+|.+.|+++|.+.|+.++..+
T Consensus 62 ~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D-~~~P~nvYG~sKl~GE~~v~~~~ 139 (281)
T COG1091 62 AVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETD-TPNPLNVYGRSKLAGEEAVRAAG 139 (281)
T ss_pred ccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHHhC
Confidence 5 344566789999999999999999997 99999999999777666666654 45788999999999999999999
Q ss_pred CcEEEEeCCcccCCCC
Q 025456 223 INYTIIRPGGLRNEPP 238 (252)
Q Consensus 223 i~~~~lrPg~i~~~~~ 238 (252)
-+..++|.+++++..+
T Consensus 140 ~~~~I~Rtswv~g~~g 155 (281)
T COG1091 140 PRHLILRTSWVYGEYG 155 (281)
T ss_pred CCEEEEEeeeeecCCC
Confidence 9999999999999865
No 56
>PLN02996 fatty acyl-CoA reductase
Probab=99.89 E-value=1.1e-22 Score=184.35 Aligned_cols=174 Identities=19% Similarity=0.207 Sum_probs=129.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCC---CeEEEeecCchhhh-------hccc------------c-----CCCCeEE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKG---FAVKAGVRDLDKAK-------TTLS------------K-----DNPSLQI 116 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~-------~~~~------------~-----~~~~~~~ 116 (252)
.++++|+|||||||||++|++.|++.+ .+|+++.|..+... +... . ...++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 468999999999999999999999864 36899999754211 1100 0 0157899
Q ss_pred EEeeCCCC------hHHHHHHHcCCCcEEEEcCCCCC-CCCCCCcceehHHHHHHHHHHHHhc-CCCEEEEEccceeecc
Q 025456 117 VKADVTEG------SAKLSEAIGDDSEAVVCATGFQP-GWDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVNGA 188 (252)
Q Consensus 117 i~~Dl~d~------~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~~v~~~ 188 (252)
+.+|++++ .+.+.+++.+ +|+|||+|+... ..+....+++|+.|+.+++++|++. ++++||++||.++||.
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~-vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~ 167 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKE-IDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGE 167 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhC-CCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecC
Confidence 99999842 3446677777 999999998654 2345566789999999999999985 6889999999999986
Q ss_pred CCCC----CCCcch----------------------------------------------hccchhhHHHHHHHHHHHHH
Q 025456 189 AMGQ----ILNPAY----------------------------------------------IFLNVFGLTLIAKLQAEQYI 218 (252)
Q Consensus 189 ~~~~----~~~~~~----------------------------------------------~~~~~~~~y~~sK~~~e~~~ 218 (252)
..+. ++.+.. ....+.+.|+.+|+++|+++
T Consensus 168 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv 247 (491)
T PLN02996 168 KSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLL 247 (491)
T ss_pred CCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHH
Confidence 4321 111000 00112356999999999998
Q ss_pred HH--cCCcEEEEeCCcccCCCC
Q 025456 219 RK--SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 219 ~~--~gi~~~~lrPg~i~~~~~ 238 (252)
++ .+++++++||++|+|+..
T Consensus 248 ~~~~~~lpv~i~RP~~V~G~~~ 269 (491)
T PLN02996 248 GNFKENLPLVIIRPTMITSTYK 269 (491)
T ss_pred HHhcCCCCEEEECCCEeccCCc
Confidence 75 489999999999999754
No 57
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.89 E-value=3.8e-22 Score=168.64 Aligned_cols=157 Identities=22% Similarity=0.314 Sum_probs=121.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc-------CCCcE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-------DDSEA 138 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~-------~~~d~ 138 (252)
+++++||||+|+||++++++|+++|++|++++|+++..+.... .+++++.+|++| .+++.+++. +++|+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~---~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA---EGLEAFQLDYAE-PESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---CCceEEEccCCC-HHHHHHHHHHHHHHcCCCccE
Confidence 6899999999999999999999999999999999876654332 358889999999 666655443 24899
Q ss_pred EEEcCCCCCCC--------CCCCcceehHHH----HHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhH
Q 025456 139 VVCATGFQPGW--------DLFAPWKVDNFG----TVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (252)
Q Consensus 139 vi~~ag~~~~~--------~~~~~~~~n~~g----~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~ 206 (252)
||||||..... +++..+++|+.| +..+++.+++.+.++||++||...+.. ......
T Consensus 80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~------------~~~~~~ 147 (277)
T PRK05993 80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP------------MKYRGA 147 (277)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC------------CCccch
Confidence 99999875422 233467899999 555666677777789999999754321 123467
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 207 y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
|+.+|++.+.+.+ +.|+++++|+||.+.++..
T Consensus 148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~ 186 (277)
T PRK05993 148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFR 186 (277)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchh
Confidence 9999999998754 4699999999999988753
No 58
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.89 E-value=3.8e-22 Score=171.72 Aligned_cols=169 Identities=25% Similarity=0.347 Sum_probs=130.2
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcCC
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG 144 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ag 144 (252)
+|+||||+|+||++++++|+++|++|++++|........... ...+++++.+|+++ .+++.+++.. ++|+||||||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~d~vv~~ag 79 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRD-RELLDRLFEEHKIDAVIHFAG 79 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCC-HHHHHHHHHhCCCcEEEECcc
Confidence 589999999999999999999999999876543221111110 11257788999999 8888888863 4999999998
Q ss_pred CCCC----CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHH
Q 025456 145 FQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK 220 (252)
Q Consensus 145 ~~~~----~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~ 220 (252)
.... .+..+.++.|+.++.+++++|++.+++++|++||..+|+.....+..+. .+..+...|+.+|.++|.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~-~~~~~~~~y~~sK~~~e~~~~~ 158 (328)
T TIGR01179 80 LIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISED-SPLGPINPYGRSKLMSERILRD 158 (328)
T ss_pred ccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCcccc-CCCCCCCchHHHHHHHHHHHHH
Confidence 6432 2445667899999999999999999889999999999876543333333 2344667899999999987753
Q ss_pred -----cCCcEEEEeCCcccCCCC
Q 025456 221 -----SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 221 -----~gi~~~~lrPg~i~~~~~ 238 (252)
.+++++++||+.++|+..
T Consensus 159 ~~~~~~~~~~~ilR~~~v~g~~~ 181 (328)
T TIGR01179 159 LSKADPGLSYVILRYFNVAGADP 181 (328)
T ss_pred HHHhccCCCEEEEecCcccCCCC
Confidence 689999999999999854
No 59
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.1e-22 Score=169.94 Aligned_cols=161 Identities=26% Similarity=0.285 Sum_probs=124.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCcE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d~ 138 (252)
++++|+||||+|+||++++++|+++|++|++++|+.+..+.........+.++++|++| .+++.+.+.. .+|+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999999999999999876654333233568889999999 6666555432 3899
Q ss_pred EEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccchhhH
Q 025456 139 VVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (252)
Q Consensus 139 vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~ 206 (252)
||||+|.... .++++.+++|+.++.++++.+ ++.+.+++|++||...+... .....
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~~~ 148 (275)
T PRK08263 81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF------------PMSGI 148 (275)
T ss_pred EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC------------CCccH
Confidence 9999997542 234456789999988887775 56677899999998654322 12367
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 207 y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
|+.+|++.+.+.+ .+|+++++++||.+.++..
T Consensus 149 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~ 187 (275)
T PRK08263 149 YHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWA 187 (275)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCcc
Confidence 9999999876653 3689999999999988764
No 60
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.3e-22 Score=188.93 Aligned_cols=171 Identities=26% Similarity=0.304 Sum_probs=129.0
Q ss_pred cEEEEEcCCChHHHHHHHHHH--HCCCeEEEeecCchhh--hhcccc-CCCCeEEEEeeCCCC-----hHHHHHHHcCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLL--AKGFAVKAGVRDLDKA--KTTLSK-DNPSLQIVKADVTEG-----SAKLSEAIGDDS 136 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~--~~G~~V~~~~r~~~~~--~~~~~~-~~~~~~~i~~Dl~d~-----~~~~~~~~~~~~ 136 (252)
|+|+|||||||||++|+++|+ ++|++|++++|+.... ...... ...+++++.+|++|+ .+.+.++ .+ +
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~-~ 78 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GD-I 78 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cC-C
Confidence 479999999999999999999 5799999999975332 111111 125789999999983 1334444 66 9
Q ss_pred cEEEEcCCCCCC-CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcch--hccchhhHHHHHHHH
Q 025456 137 EAVVCATGFQPG-WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAY--IFLNVFGLTLIAKLQ 213 (252)
Q Consensus 137 d~vi~~ag~~~~-~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~--~~~~~~~~y~~sK~~ 213 (252)
|+|||||+.... .+.....++|+.++.+++++|++.++++||++||..+||...+. ..+.. .+.++...|+.+|.+
T Consensus 79 D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~-~~e~~~~~~~~~~~~Y~~sK~~ 157 (657)
T PRK07201 79 DHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGV-FREDDFDEGQGLPTPYHRTKFE 157 (657)
T ss_pred CEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCc-cccccchhhcCCCCchHHHHHH
Confidence 999999986442 23345678999999999999999999999999999999764332 12211 122334679999999
Q ss_pred HHHHHHH-cCCcEEEEeCCcccCCCCCC
Q 025456 214 AEQYIRK-SGINYTIIRPGGLRNEPPTG 240 (252)
Q Consensus 214 ~e~~~~~-~gi~~~~lrPg~i~~~~~~~ 240 (252)
+|+++++ .+++++++||+.++|+...+
T Consensus 158 ~E~~~~~~~g~~~~ilRp~~v~G~~~~g 185 (657)
T PRK07201 158 AEKLVREECGLPWRVYRPAVVVGDSRTG 185 (657)
T ss_pred HHHHHHHcCCCcEEEEcCCeeeecCCCC
Confidence 9999874 68999999999999976543
No 61
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.2e-21 Score=164.84 Aligned_cols=156 Identities=25% Similarity=0.372 Sum_probs=123.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCcE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d~ 138 (252)
++++++||||+|+||++++++|+++|++|++++|+++.... ..+++++++|++| .+++.+++.+ ++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-----IPGVELLELDVTD-DASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----cCCCeeEEeecCC-HHHHHHHHHHHHHhCCCCCE
Confidence 36899999999999999999999999999999998765432 2468899999999 7777766642 3899
Q ss_pred EEEcCCCCCCC--------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccchhhH
Q 025456 139 VVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (252)
Q Consensus 139 vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~ 206 (252)
||||||..... +++..+++|+.|+.++++++ ++.+.++||++||...+... .....
T Consensus 77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~ 144 (270)
T PRK06179 77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA------------PYMAL 144 (270)
T ss_pred EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC------------CCccH
Confidence 99999975421 23456789999988888874 66777899999997544221 12467
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 207 y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
|+.+|.+.+.+++ +.|+++++++||++.++..
T Consensus 145 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 145 YAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 9999999887654 3699999999999988754
No 62
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.88 E-value=3.6e-22 Score=167.63 Aligned_cols=162 Identities=20% Similarity=0.286 Sum_probs=122.1
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc----CCCCeEEEEeeCCCChHHHHHHHc-----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIG----- 133 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~i~~Dl~d~~~~~~~~~~----- 133 (252)
++++|+++||||+|+||++++++|+++|++|++++|+.+..++.... ...++.++.+|++| .+++.+++.
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~ 83 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNI 83 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhh
Confidence 35689999999999999999999999999999999987665432211 13468899999999 666666554
Q ss_pred CCCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 134 DDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 134 ~~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
+++|++|||+|.... .+|+..+++|+.+...+++++ ++.+.+++|++||...+.. .
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~------------~ 151 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP------------I 151 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC------------C
Confidence 249999999986431 235566889988866665554 5566679999999864321 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..+..|..+|.+.+.+.+ +.|+++++|.||.+.++.
T Consensus 152 ~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~ 194 (263)
T PRK08339 152 PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDR 194 (263)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHH
Confidence 124568889998887654 368999999999998874
No 63
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.88 E-value=3.3e-22 Score=171.57 Aligned_cols=163 Identities=16% Similarity=0.143 Sum_probs=121.9
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc---CCCcEEEEcCC
Q 025456 69 IFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG---DDSEAVVCATG 144 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~---~~~d~vi~~ag 144 (252)
|+||||+||||+++++.|+++|+ +|+++.|..... . +. . .....+..|+.+ .+.++.+.. .++|+|||+|+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~-~-~~~~~~~~d~~~-~~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FL-N-LADLVIADYIDK-EDFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hh-h-hhheeeeccCcc-hhHHHHHHhhccCCCCEEEECcc
Confidence 68999999999999999999997 788877654321 1 11 0 111345678877 666665553 23999999998
Q ss_pred CCC--CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHH--
Q 025456 145 FQP--GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-- 220 (252)
Q Consensus 145 ~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-- 220 (252)
... ..++...+++|+.++.+++++|++.++ +||++||.++|+.... +..+...+.++.+.|+.+|..+|+++++
T Consensus 76 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~ 153 (314)
T TIGR02197 76 CSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVRRRV 153 (314)
T ss_pred ccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHHHHh
Confidence 643 234556678999999999999999887 8999999999986532 3333333345677899999999988764
Q ss_pred ----cCCcEEEEeCCcccCCCC
Q 025456 221 ----SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 221 ----~gi~~~~lrPg~i~~~~~ 238 (252)
.+++++++||+.++|+..
T Consensus 154 ~~~~~~~~~~~lR~~~vyG~~~ 175 (314)
T TIGR02197 154 LPEALSAQVVGLRYFNVYGPRE 175 (314)
T ss_pred HhhccCCceEEEEEeeccCCCC
Confidence 257999999999999864
No 64
>PRK05717 oxidoreductase; Validated
Probab=99.88 E-value=3.8e-22 Score=166.49 Aligned_cols=164 Identities=16% Similarity=0.202 Sum_probs=123.5
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
..+++|+++||||+|+||++++++|+++|++|++++|+.++..+.......++.++++|++| .+++.+++.. +
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGR 84 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCC
Confidence 45678999999999999999999999999999999888765543322223468899999999 6666544332 4
Q ss_pred CcEEEEcCCCCCCC----------CCCCcceehHHHHHHHHHHHHh---cCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 136 SEAVVCATGFQPGW----------DLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 136 ~d~vi~~ag~~~~~----------~~~~~~~~n~~g~~~ll~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
+|+||||||..... +++..+++|+.++.++++++.. ...+++|++||...+... .
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~------------~ 152 (255)
T PRK05717 85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE------------P 152 (255)
T ss_pred CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC------------C
Confidence 89999999975321 2345678999999999999853 223689999987543211 1
Q ss_pred hhhHHHHHHHHHHHHHHH------cCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~~------~gi~~~~lrPg~i~~~~~ 238 (252)
....|+.+|++.+.+++. .++++++++||.+.++..
T Consensus 153 ~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~ 194 (255)
T PRK05717 153 DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDP 194 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcc
Confidence 235699999999877652 259999999999998753
No 65
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.88 E-value=1.7e-22 Score=168.50 Aligned_cols=153 Identities=26% Similarity=0.359 Sum_probs=113.4
Q ss_pred EEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhhcccc-----CCCCeE----EEEeeCCCChHHHHHHHcC-CCc
Q 025456 69 IFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSK-----DNPSLQ----IVKADVTEGSAKLSEAIGD-DSE 137 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~-----~~~~~~----~i~~Dl~d~~~~~~~~~~~-~~d 137 (252)
||||||+|.||++|+++|++.+ .++++++|++......... ...++. .+.+|++| .+.+.+++.. ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd-~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRD-KERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCH-HHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccC-HHHHHHHHhhcCCC
Confidence 7999999999999999999987 5799999998766432211 123443 35789999 8999999983 499
Q ss_pred EEEEcCCCCC----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHH
Q 025456 138 AVVCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQ 213 (252)
Q Consensus 138 ~vi~~ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~ 213 (252)
+|||+|+..+ +.++.+.+++|+.||.|++++|.++++++||++||.- ..+|.+.||++|..
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDK---------------Av~PtnvmGatKrl 144 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDK---------------AVNPTNVMGATKRL 144 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECG---------------CSS--SHHHHHHHH
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccc---------------cCCCCcHHHHHHHH
Confidence 9999999876 5678888999999999999999999999999999852 23567889999999
Q ss_pred HHHHHHHc-------CCcEEEEeCCcccCCC
Q 025456 214 AEQYIRKS-------GINYTIIRPGGLRNEP 237 (252)
Q Consensus 214 ~e~~~~~~-------gi~~~~lrPg~i~~~~ 237 (252)
+|.++... +.+++++|.|+|.+..
T Consensus 145 aE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~ 175 (293)
T PF02719_consen 145 AEKLVQAANQYSGNSDTKFSSVRFGNVLGSR 175 (293)
T ss_dssp HHHHHHHHCCTSSSS--EEEEEEE-EETTGT
T ss_pred HHHHHHHHhhhCCCCCcEEEEEEecceecCC
Confidence 99988642 4689999999999854
No 66
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.88 E-value=6.3e-22 Score=164.98 Aligned_cols=162 Identities=15% Similarity=0.181 Sum_probs=122.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh-hhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CC
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~ 136 (252)
+++|+++||||+++||++++++|+++|++|++++|+... ..+.+.....++.++.+|++| .+++.+++.. ++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999998886432 222222234568899999999 7766665541 49
Q ss_pred cEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 137 d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
|++|||||.... .+|+..+++|+.++..+++++. +.+ .++||++||...+.... .
T Consensus 85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------~ 152 (251)
T PRK12481 85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI------------R 152 (251)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC------------C
Confidence 999999997432 2466778999999988887763 333 36999999986543211 1
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
...|..+|++.+.+.+ ++|+++++|+||.+.++..
T Consensus 153 ~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~ 194 (251)
T PRK12481 153 VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNT 194 (251)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCch
Confidence 3468899999887664 3689999999999988753
No 67
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.88 E-value=8.9e-22 Score=160.15 Aligned_cols=169 Identities=20% Similarity=0.279 Sum_probs=138.6
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
...++++|+||||.||||+|||+.|..+|++|++++---+..+..+.. ...+++.+..|+.. ..+.+ +|.|
T Consensus 23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~------pl~~e-vD~I 95 (350)
T KOG1429|consen 23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVE------PLLKE-VDQI 95 (350)
T ss_pred cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechh------HHHHH-hhhh
Confidence 445679999999999999999999999999999988765555443321 34678888888876 36677 9999
Q ss_pred EEcCCCCC----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcch----hccchhhHHHHHH
Q 025456 140 VCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAY----IFLNVFGLTLIAK 211 (252)
Q Consensus 140 i~~ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~----~~~~~~~~y~~sK 211 (252)
+|+|+... ..++..++..|..++.+++-.|++-+ +||++.||..|||+....|..+.+ .+..+...|...|
T Consensus 96 yhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegK 174 (350)
T KOG1429|consen 96 YHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGK 174 (350)
T ss_pred hhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHH
Confidence 99987654 35677889999999999999999999 599999999999997766655544 3456678899999
Q ss_pred HHHHHHHH----HcCCcEEEEeCCcccCCCC
Q 025456 212 LQAEQYIR----KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 212 ~~~e~~~~----~~gi~~~~lrPg~i~~~~~ 238 (252)
..+|.+.. +.|+.+.|.|+.++|||..
T Consensus 175 r~aE~L~~~y~k~~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 175 RVAETLCYAYHKQEGIEVRIARIFNTYGPRM 205 (350)
T ss_pred HHHHHHHHHhhcccCcEEEEEeeecccCCcc
Confidence 99998764 5799999999999999864
No 68
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.88 E-value=6.9e-22 Score=172.51 Aligned_cols=172 Identities=21% Similarity=0.260 Sum_probs=127.2
Q ss_pred EEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhh------hhcccc-------CC-CCeEEEEeeCCCC-----hH
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKA------KTTLSK-------DN-PSLQIVKADVTEG-----SA 126 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~------~~~~~~-------~~-~~~~~i~~Dl~d~-----~~ 126 (252)
+|+|||||||||++++++|+++| ++|++++|+.+.. .+.+.. .. .+++++.+|++++ .+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 6799999986522 111110 01 4799999999862 24
Q ss_pred HHHHHHcCCCcEEEEcCCCCCC-CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcch----hcc
Q 025456 127 KLSEAIGDDSEAVVCATGFQPG-WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAY----IFL 201 (252)
Q Consensus 127 ~~~~~~~~~~d~vi~~ag~~~~-~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~----~~~ 201 (252)
...+...+ +|+|||||+.... .......++|+.++.+++++|.+.++++|+++||.++|+.....+..+.. ...
T Consensus 81 ~~~~~~~~-~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~ 159 (367)
T TIGR01746 81 EWERLAEN-VDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPP 159 (367)
T ss_pred HHHHHHhh-CCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccccccc
Confidence 55666667 9999999986542 23344567999999999999999988889999999998754222111111 112
Q ss_pred chhhHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIRK---SGINYTIIRPGGLRNEPPTG 240 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~~---~gi~~~~lrPg~i~~~~~~~ 240 (252)
.+...|+.+|+.+|.++++ .|++++++|||.++|+...+
T Consensus 160 ~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g 201 (367)
T TIGR01746 160 GLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTG 201 (367)
T ss_pred ccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCC
Confidence 2345799999999988764 48999999999999975433
No 69
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.3e-21 Score=168.27 Aligned_cols=174 Identities=18% Similarity=0.178 Sum_probs=125.3
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---c--CCCCeEEEEeeCCCChHHHHHHHcC---
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSEAIGD--- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~--~~~~~~~i~~Dl~d~~~~~~~~~~~--- 134 (252)
++++++++||||++|||.+++++|+++|++|++++|+.++.++... . ...++.++++|++| .+++++++..
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~ 89 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRA 89 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999998776543221 1 12468899999999 7776655432
Q ss_pred ---CCcEEEEcCCCCCC-------CCCCCcceehHHHHHHHHHHHH---hcCCCEEEEEccceeeccCC-CCCCCcchhc
Q 025456 135 ---DSEAVVCATGFQPG-------WDLFAPWKVDNFGTVNLVEACR---KRGVNRFILISSILVNGAAM-GQILNPAYIF 200 (252)
Q Consensus 135 ---~~d~vi~~ag~~~~-------~~~~~~~~~n~~g~~~ll~~~~---~~~~~~~v~~SS~~v~~~~~-~~~~~~~~~~ 200 (252)
++|++|||||+... ++++..+.+|+.|.+.+++.+. +.+.+++|++||...+.... ...... ...
T Consensus 90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~-~~~ 168 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNW-ERS 168 (313)
T ss_pred hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccc-ccc
Confidence 49999999996431 2345568999999888777763 22346899999976432211 111111 112
Q ss_pred cchhhHHHHHHHHHHHHHHH---------cCCcEEEEeCCcccCCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~~---------~gi~~~~lrPg~i~~~~~ 238 (252)
..++..|+.+|.+.+.+.+. .|++++++.||.+.++..
T Consensus 169 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~ 215 (313)
T PRK05854 169 YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL 215 (313)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence 34567899999988765531 379999999999988754
No 70
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.88 E-value=8.9e-22 Score=164.61 Aligned_cols=160 Identities=20% Similarity=0.162 Sum_probs=117.7
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhh--hccccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK--TTLSKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
.+++|+++||||+||||++++++|+++|++|++++|+....+ +.+.....++.++.+|++| .+++.+++..
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFG 83 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999999999753211 1121123467889999999 6665554431
Q ss_pred CCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 ~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||||.... .+++..+++|+.++.++++.+ ++.+.++||++||...++.
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------- 150 (260)
T PRK12823 84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------- 150 (260)
T ss_pred CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-------------
Confidence 49999999985321 123345688998877655544 5566679999999865431
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
....|+.+|++.+.+.+ ..|+++++|+||++++++
T Consensus 151 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T PRK12823 151 -NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP 192 (260)
T ss_pred -CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence 12468899999987664 248999999999999974
No 71
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.6e-21 Score=167.05 Aligned_cols=175 Identities=19% Similarity=0.127 Sum_probs=122.4
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---cc--CCCCeEEEEeeCCCChHHHHHHHcC---
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SK--DNPSLQIVKADVTEGSAKLSEAIGD--- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~--~~~~~~~i~~Dl~d~~~~~~~~~~~--- 134 (252)
++++++|+||||+||||++++++|+++|++|++++|+.+...+.. .. ...++.++.+|++| .+++.+++..
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~ 91 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRA 91 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHh
Confidence 346899999999999999999999999999999999876543211 11 13468899999999 7766655431
Q ss_pred ---CCcEEEEcCCCCC------CCCCCCcceehHHH----HHHHHHHHHhcCCCEEEEEccceeeccC-CCCCCCcchhc
Q 025456 135 ---DSEAVVCATGFQP------GWDLFAPWKVDNFG----TVNLVEACRKRGVNRFILISSILVNGAA-MGQILNPAYIF 200 (252)
Q Consensus 135 ---~~d~vi~~ag~~~------~~~~~~~~~~n~~g----~~~ll~~~~~~~~~~~v~~SS~~v~~~~-~~~~~~~~~~~ 200 (252)
++|+||||||... ..+++..+++|+.| +..+++.+++.+.++||++||...+... ..........+
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~ 171 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERR 171 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccC
Confidence 4999999998643 13455678999999 4555666666666799999998643211 10000000112
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEE--EeCCcccCCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTI--IRPGGLRNEPP 238 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~--lrPg~i~~~~~ 238 (252)
..+...|+.+|++.+.+.+ ..++++++ +.||.+.++..
T Consensus 172 ~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~ 218 (306)
T PRK06197 172 YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA 218 (306)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence 3456789999998887654 24666655 47999988764
No 72
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.88 E-value=6.9e-22 Score=165.37 Aligned_cols=161 Identities=22% Similarity=0.198 Sum_probs=123.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---c--CCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~--~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
+++|+++||||+|+||++++++|+++|++|++++|+.+..++... . ...++.++++|++| .+++.+++..
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999998766543221 1 23468889999999 6666655541
Q ss_pred --CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 135 --DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 135 --~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
++|+||||||.... .+++..+++|+.++.++++++. +.+.++||++||...+..
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 151 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI------------ 151 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC------------
Confidence 49999999996432 2345668899999988888863 445579999999754321
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
......|..+|++.+.+.+ +.|+++++|+||.+.++.
T Consensus 152 ~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~ 195 (260)
T PRK07063 152 IPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQL 195 (260)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChh
Confidence 1224579999999887764 258999999999998875
No 73
>PLN02253 xanthoxin dehydrogenase
Probab=99.88 E-value=1e-21 Score=166.07 Aligned_cols=161 Identities=17% Similarity=0.150 Sum_probs=122.0
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHc------C
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIG------D 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~------~ 134 (252)
++++|+++||||+|+||++++++|+++|++|++++|+.+..++.... ...++.++++|++| .+++.+++. +
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFG 93 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhC
Confidence 45689999999999999999999999999999999886554332211 23468899999999 777776664 1
Q ss_pred CCcEEEEcCCCCCC----------CCCCCcceehHHHHHHHHHHHHh----cCCCEEEEEcccee-eccCCCCCCCcchh
Q 025456 135 DSEAVVCATGFQPG----------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILV-NGAAMGQILNPAYI 199 (252)
Q Consensus 135 ~~d~vi~~ag~~~~----------~~~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v-~~~~~~~~~~~~~~ 199 (252)
++|+||||||.... .+++..+++|+.++.++++++.. .+.+++|++||... ++.
T Consensus 94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------- 162 (280)
T PLN02253 94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG----------- 162 (280)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-----------
Confidence 49999999986421 12345689999999998887742 34468999988643 211
Q ss_pred ccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.....|+.+|++.|.+.+ ..|+++++++||.+.++.
T Consensus 163 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 205 (280)
T PLN02253 163 --LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL 205 (280)
T ss_pred --CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence 112468999999987764 248999999999998864
No 74
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.88 E-value=5.5e-22 Score=164.76 Aligned_cols=164 Identities=20% Similarity=0.293 Sum_probs=121.2
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhc----cccCCC-CeEEEEeeCCCChHHHHHHH-----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT----LSKDNP-SLQIVKADVTEGSAKLSEAI----- 132 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~----~~~~~~-~~~~i~~Dl~d~~~~~~~~~----- 132 (252)
++++|+|+|||||+|||.+++.+|+++|.+++.++|...+++.. .+.... ++.++++|++| .+++.+++
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~-~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD-EESVKKFVEWAIR 87 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC-HHHHHHHHHHHHH
Confidence 45789999999999999999999999999888888776555432 111222 59999999999 77777554
Q ss_pred --cCCCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcch
Q 025456 133 --GDDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAY 198 (252)
Q Consensus 133 --~~~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~ 198 (252)
++ +|++|||||+... .+....+++|+.|+..+.+++ ++.+-++||.+||+..+-..
T Consensus 88 ~fg~-vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~--------- 157 (282)
T KOG1205|consen 88 HFGR-VDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL--------- 157 (282)
T ss_pred hcCC-CCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC---------
Confidence 34 9999999998652 123356899999988877776 56666799999999643211
Q ss_pred hccchhhHHHHHHHHHHHHHH---H----cC--CcEEEEeCCcccCCCCCCc
Q 025456 199 IFLNVFGLTLIAKLQAEQYIR---K----SG--INYTIIRPGGLRNEPPTGN 241 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~---~----~g--i~~~~lrPg~i~~~~~~~~ 241 (252)
.....|.+||++.+.+.+ . .+ +.+ ++.||.|.+......
T Consensus 158 ---P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~ 205 (282)
T KOG1205|consen 158 ---PFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE 205 (282)
T ss_pred ---CcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence 122478899999987753 1 23 333 699999999855433
No 75
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.88 E-value=7.6e-22 Score=165.40 Aligned_cols=161 Identities=20% Similarity=0.205 Sum_probs=122.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
+++++++||||+|+||++++++|+++|++|++++|+.+..++.......++.++++|++| .+++.+++.. ++|
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 458999999999999999999999999999999998766554333233568899999999 6666655542 489
Q ss_pred EEEEcCCCCCC-------CCCCCcceehHHHHHHHHHHHHh---cCCCEEEEEccceeeccCCCCCCCcchhccchhhHH
Q 025456 138 AVVCATGFQPG-------WDLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (252)
Q Consensus 138 ~vi~~ag~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y 207 (252)
+||||||.... .++++.+++|+.++.++++++.. .+.++||++||....... .....|
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~~~~Y 150 (261)
T PRK08265 83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ------------TGRWLY 150 (261)
T ss_pred EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC------------CCCchh
Confidence 99999996431 13445678999999988887642 334689999997542111 124578
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 208 ~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..+|.+.+.+.+ +.|+++++|+||.+.++.
T Consensus 151 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~ 187 (261)
T PRK08265 151 PASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRV 187 (261)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChh
Confidence 999999887664 258999999999998875
No 76
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.88 E-value=4.9e-22 Score=165.79 Aligned_cols=163 Identities=20% Similarity=0.203 Sum_probs=124.7
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
++++|+++||||+|+||++++++|+++|++|++++|++++.++.. ...+.++.++++|++| .+++.+++.+
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhc
Confidence 356899999999999999999999999999999999876554322 2123458889999999 7777666542
Q ss_pred -CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHHh----cCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 -DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 -~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||+|..... +++..+++|+.++.++++++.+ .+.++||++||...+.. .
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~------------~ 153 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA------------R 153 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC------------C
Confidence 389999999875321 2345577999999999998853 35679999999743211 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..+..|+.+|.+.+.+.+ ++|+++++++||.+.++..
T Consensus 154 ~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~ 197 (255)
T PRK07523 154 PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLN 197 (255)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchh
Confidence 235678999999887654 4689999999999998853
No 77
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.88 E-value=1e-21 Score=173.87 Aligned_cols=160 Identities=24% Similarity=0.316 Sum_probs=135.2
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhhc---ccc--CCCCeEEEEeeCCCChHHHHHHHcC-C
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTT---LSK--DNPSLQIVKADVTEGSAKLSEAIGD-D 135 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~---~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~-~ 135 (252)
..++|+|+||||+|-||+++++++++.+ .++++++|++.+.... +.. ...++.++-+|+.| .+.+.+++.+ +
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD-~~~~~~~~~~~k 325 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRD-RDRVERAMEGHK 325 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEeccccc-HHHHHHHHhcCC
Confidence 4679999999999999999999999986 5788889987665331 211 23678899999999 8999999988 8
Q ss_pred CcEEEEcCCCCC----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHH
Q 025456 136 SEAVVCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAK 211 (252)
Q Consensus 136 ~d~vi~~ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK 211 (252)
+|+|||+|+..+ +.++.+.+++|+.||+|++++|.+.++++||++||.- ..+|.+.||.+|
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK---------------AV~PtNvmGaTK 390 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK---------------AVNPTNVMGATK 390 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc---------------ccCCchHhhHHH
Confidence 999999999765 5788899999999999999999999999999999852 246678899999
Q ss_pred HHHHHHHHHc-------CCcEEEEeCCcccCCCC
Q 025456 212 LQAEQYIRKS-------GINYTIIRPGGLRNEPP 238 (252)
Q Consensus 212 ~~~e~~~~~~-------gi~~~~lrPg~i~~~~~ 238 (252)
..+|.++... +-+++++|.|||.|..+
T Consensus 391 r~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG 424 (588)
T COG1086 391 RLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG 424 (588)
T ss_pred HHHHHHHHHHhhccCCCCcEEEEEEecceecCCC
Confidence 9999887531 47899999999999653
No 78
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.88 E-value=9.2e-22 Score=165.79 Aligned_cols=161 Identities=18% Similarity=0.167 Sum_probs=121.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
+++++++||||+|+||++++++|+++|++|++.+|+++..+...... .++.++.+|++| .+++.+.+.. ++|
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 80 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-GLVVGGPLDVTD-PASFAAFLDAVEADLGPID 80 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-ccceEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 45789999999999999999999999999999999887665432211 257889999999 6665544432 389
Q ss_pred EEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 138 AVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 138 ~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
++|||+|..... ++...+++|+.|+.++++.+ ++.+.++||++||...+... ....
T Consensus 81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~ 148 (273)
T PRK07825 81 VLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV------------PGMA 148 (273)
T ss_pred EEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC------------CCCc
Confidence 999999975421 23345789999988876665 55677899999998643211 2246
Q ss_pred HHHHHHHHHHHHH-------HHcCCcEEEEeCCcccCCCC
Q 025456 206 LTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 206 ~y~~sK~~~e~~~-------~~~gi~~~~lrPg~i~~~~~ 238 (252)
.|..+|++.+.+. ++.|+++++|+||.+.++..
T Consensus 149 ~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~ 188 (273)
T PRK07825 149 TYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELI 188 (273)
T ss_pred chHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhh
Confidence 7889998776554 24699999999999988754
No 79
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.87 E-value=8.6e-22 Score=164.61 Aligned_cols=159 Identities=20% Similarity=0.299 Sum_probs=120.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
+++|+||||+|+||.+++++|+++|++|++++|+.+..++.... ...++.++.+|++| .+++.++++. ++|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCCC
Confidence 57999999999999999999999999999999987765443221 11268899999999 7777665532 389
Q ss_pred EEEEcCCCCCCC---------CCCCcceehHHHHHHHHH----HHHhcCCCEEEEEccceeeccCCCCCCCcchhccchh
Q 025456 138 AVVCATGFQPGW---------DLFAPWKVDNFGTVNLVE----ACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (252)
Q Consensus 138 ~vi~~ag~~~~~---------~~~~~~~~n~~g~~~ll~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~ 204 (252)
+||||+|..... +++..+++|+.|+.++++ .+++.+.++||++||...+... ...
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~------------~~~ 148 (257)
T PRK07024 81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL------------PGA 148 (257)
T ss_pred EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC------------CCC
Confidence 999999864321 233457899999988776 4566667899999997543211 123
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..|+.+|++.+.+.+ +.|+++++++||.+.++.
T Consensus 149 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 188 (257)
T PRK07024 149 GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPM 188 (257)
T ss_pred cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCch
Confidence 568999999987663 358999999999998875
No 80
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.87 E-value=7.5e-22 Score=165.01 Aligned_cols=161 Identities=22% Similarity=0.193 Sum_probs=120.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++++++||||+|+||++++++|+++|++|++++|+++..++.. .+...++.++++|++| .+++.+++..
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 45899999999999999999999999999999999886544322 2223467889999999 7766655442
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHH----HHHHHHHH-HhcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFG----TVNLVEAC-RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g----~~~ll~~~-~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||+|.... .+++..+++|+.+ +.++++.+ ++.+.++||++||...+.. .
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~------------~ 151 (262)
T PRK13394 84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA------------S 151 (262)
T ss_pred CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC------------C
Confidence 38999999997532 1234556799999 55666666 6667789999999754321 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.....|+.+|.+.+.+++ ..++++++++||.++++.
T Consensus 152 ~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~ 194 (262)
T PRK13394 152 PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPL 194 (262)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchh
Confidence 123567888888776654 258999999999999875
No 81
>PRK06128 oxidoreductase; Provisional
Probab=99.87 E-value=1.3e-21 Score=167.28 Aligned_cols=163 Identities=14% Similarity=0.168 Sum_probs=123.1
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh--hh---hccccCCCCeEEEEeeCCCChHHHHHHHcC---
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK--AK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--~~---~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--- 134 (252)
.+++|+++||||+|+||++++++|+++|++|++..++.+. .+ +.+.....++.++.+|++| .+++.+++..
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~ 130 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVK 130 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHH
Confidence 3568999999999999999999999999999987765432 11 1222233467889999999 6666655431
Q ss_pred ---CCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 135 ---DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 135 ---~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
++|+||||||.... .+++..+++|+.++.++++++... .-++||++||...|...
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~----------- 199 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS----------- 199 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC-----------
Confidence 39999999996421 235567899999999999998642 22599999998766432
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..+..|+.+|.+.+.+.+ ..|+++++|+||.+.++..
T Consensus 200 -~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~ 243 (300)
T PRK06128 200 -PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQ 243 (300)
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCc
Confidence 124569999999887764 2589999999999999864
No 82
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.87 E-value=4.6e-21 Score=163.38 Aligned_cols=165 Identities=17% Similarity=0.216 Sum_probs=124.4
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHc-----
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG----- 133 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~----- 133 (252)
..+++++++||||+|+||++++++|+++|++|++++|+.+..++... ....++.++++|++| .+++.+++.
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 114 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKR 114 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999999866543221 123467889999999 777766655
Q ss_pred -CCCcEEEEcCCCCCCC----------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcch
Q 025456 134 -DDSEAVVCATGFQPGW----------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAY 198 (252)
Q Consensus 134 -~~~d~vi~~ag~~~~~----------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~ 198 (252)
+++|+||||||..... +++..+++|+.|+.++++++ ++.+.+++|++||.+++....
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 186 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS-------- 186 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC--------
Confidence 1399999999975321 12245789999988877765 456678999999975543110
Q ss_pred hccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.....|+.+|++.+.+.+ +.|+++++++||.+.++..
T Consensus 187 ---p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~ 230 (293)
T PRK05866 187 ---PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMI 230 (293)
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccc
Confidence 123679999999887654 3589999999999988764
No 83
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.8e-21 Score=162.72 Aligned_cols=158 Identities=20% Similarity=0.229 Sum_probs=119.8
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc------CCC
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG------DDS 136 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~------~~~ 136 (252)
.+++++++||||+|+||++++++|+++|++|++++|+.+.. ...++.++++|++| .+++.+.+. +++
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 78 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------LPEGVEFVAADLTT-AEGCAAVARAVLERLGGV 78 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------cCCceeEEecCCCC-HHHHHHHHHHHHHHcCCC
Confidence 45689999999999999999999999999999999986532 22468899999999 666554432 139
Q ss_pred cEEEEcCCCCC----------CCCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 137 EAVVCATGFQP----------GWDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 137 d~vi~~ag~~~----------~~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
|+||||||... ..+++..+++|+.++.++++++ ++.+.+++|++||...+... ..
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~~ 147 (260)
T PRK06523 79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL-----------PE 147 (260)
T ss_pred CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC-----------CC
Confidence 99999998532 1234556789999987776554 55566789999997543211 11
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
....|+.+|.+.+.+.+ ..|+++++|+||.+.++..
T Consensus 148 ~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~ 190 (260)
T PRK06523 148 STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAA 190 (260)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccH
Confidence 34679999999887654 3589999999999998853
No 84
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.5e-21 Score=164.90 Aligned_cols=162 Identities=17% Similarity=0.189 Sum_probs=122.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++|+++||||+|+||++++++|+++|++|++++|+.+..++.. .....++.++.+|++| .+++.+++..
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999999876654332 1123467889999999 7777665532
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||||.... .+++..+++|+.++.++++++. +.+ .++||++||...+.. .
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~------------~ 150 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP------------N 150 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC------------C
Confidence 48999999997432 1244557899999999888873 444 468999999865432 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.....|+.+|++.+.+.+ ..|+++++++||.+.++..
T Consensus 151 ~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 194 (275)
T PRK05876 151 AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLV 194 (275)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccc
Confidence 235679999997554332 3589999999999988754
No 85
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.87 E-value=4e-21 Score=160.99 Aligned_cols=162 Identities=16% Similarity=0.150 Sum_probs=121.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc------CCCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG------DDSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~------~~~d 137 (252)
+++++++||||+|+||++++++|+++|++|++++|+.+..++.......++.++++|++| .+++.+++. +++|
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 458999999999999999999999999999999998776554433223468889999999 665555443 1489
Q ss_pred EEEEcCCCCCC-------------CCCCCcceehHHHHHHHHHHHHhc---CCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 138 AVVCATGFQPG-------------WDLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 138 ~vi~~ag~~~~-------------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|||||.... .+|++.+++|+.++.++++++... ..+++|++||...+.. .
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~------------~ 149 (262)
T TIGR03325 82 CLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP------------N 149 (262)
T ss_pred EEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC------------C
Confidence 99999986320 134567899999999999988432 2257888888754311 1
Q ss_pred chhhHHHHHHHHHHHHHHH------cCCcEEEEeCCcccCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~~------~gi~~~~lrPg~i~~~~~ 238 (252)
.....|..+|.+.+.+.+. ..++++.|.||.+.++..
T Consensus 150 ~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~ 192 (262)
T TIGR03325 150 GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLR 192 (262)
T ss_pred CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCc
Confidence 1235789999999977652 249999999999998764
No 86
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.8e-21 Score=162.32 Aligned_cols=162 Identities=14% Similarity=0.142 Sum_probs=122.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++++++||||+|+||.+++++|+++|++|++++|++++.++... ....++.++.+|++| .+++.+++..
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 457999999999999999999999999999999998776544321 123468889999999 7666655541
Q ss_pred CCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 ~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||||.... .+++..+++|+.++.++++++ ++.+.+++|++||...+... .
T Consensus 83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~ 151 (254)
T PRK07478 83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG-----------F 151 (254)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC-----------C
Confidence 49999999996421 124566899998887775554 55666799999997543211 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..+..|..+|++.+.+.+ ..|+++++|+||.+.++.
T Consensus 152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 194 (254)
T PRK07478 152 PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPM 194 (254)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcc
Confidence 234679999999887654 248999999999998874
No 87
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.87 E-value=4e-21 Score=159.06 Aligned_cols=160 Identities=19% Similarity=0.217 Sum_probs=123.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC---CCcEEEEc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---DSEAVVCA 142 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~---~~d~vi~~ 142 (252)
+++++||||+|+||.+++++|+++|++|++++|+++..++... ...++.++++|++| .+++.+++.+ .+|.+|||
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT-QSANIFTLAFDVTD-HPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-hcCCCeEEEeeCCC-HHHHHHHHHhcccCCCEEEEc
Confidence 4789999999999999999999999999999998776554332 23468899999999 8888887764 36899999
Q ss_pred CCCCCCC--------CCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHH
Q 025456 143 TGFQPGW--------DLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKL 212 (252)
Q Consensus 143 ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~ 212 (252)
+|..... ++++.+++|+.++.++++++... +.+++|++||...... ......|+.+|+
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~~Y~asK~ 146 (240)
T PRK06101 79 AGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA------------LPRAEAYGASKA 146 (240)
T ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC------------CCCCchhhHHHH
Confidence 9854211 23356899999999999998652 2358999988642110 112457899999
Q ss_pred HHHHHHH-------HcCCcEEEEeCCcccCCCCC
Q 025456 213 QAEQYIR-------KSGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 213 ~~e~~~~-------~~gi~~~~lrPg~i~~~~~~ 239 (252)
+++.+.+ +.|+++++++||++.++...
T Consensus 147 a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~ 180 (240)
T PRK06101 147 AVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTD 180 (240)
T ss_pred HHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcC
Confidence 9987753 46899999999999998643
No 88
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.87 E-value=3.1e-21 Score=166.54 Aligned_cols=170 Identities=18% Similarity=0.263 Sum_probs=121.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
++++++||||+||||.+++++|+++|++|++++|+.++.+.... ....++.++.+|++| .+++.+++.. +
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCCC
Confidence 57999999999999999999999999999999998776543221 123468899999999 7777665532 4
Q ss_pred CcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHHH----hcC--CCEEEEEccceeeccCC-CC---CC--
Q 025456 136 SEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACR----KRG--VNRFILISSILVNGAAM-GQ---IL-- 194 (252)
Q Consensus 136 ~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~~----~~~--~~~~v~~SS~~v~~~~~-~~---~~-- 194 (252)
+|+||||||+... .+++..+++|+.|+.++++++. +.+ .++||++||...+.... +. +.
T Consensus 84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~ 163 (322)
T PRK07453 84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA 163 (322)
T ss_pred ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence 9999999996431 1245668999999999888774 333 35999999986643110 00 00
Q ss_pred Cc-----------------chhccchhhHHHHHHHHHHHHH----HH----cCCcEEEEeCCcccC
Q 025456 195 NP-----------------AYIFLNVFGLTLIAKLQAEQYI----RK----SGINYTIIRPGGLRN 235 (252)
Q Consensus 195 ~~-----------------~~~~~~~~~~y~~sK~~~e~~~----~~----~gi~~~~lrPg~i~~ 235 (252)
+. ...+.++...|+.||.+.+.+. ++ .|+++++++||++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 229 (322)
T PRK07453 164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD 229 (322)
T ss_pred chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 00 0012355678999999775433 32 379999999999963
No 89
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.87 E-value=1.7e-21 Score=161.79 Aligned_cols=162 Identities=19% Similarity=0.208 Sum_probs=122.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh-hhhccccCCCCeEEEEeeCCCChHHHHHHHc------CCC
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIG------DDS 136 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~------~~~ 136 (252)
+++|+++||||+|+||++++++|+++|++|++++|+... ..+.+.....++.++++|+++ .+++.++++ +++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999987532 222222233568899999999 766665443 149
Q ss_pred cEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 137 d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
|+||||+|.... .++++.+++|+.++.++++++. +.+ .+++|++||...+.... .
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------~ 149 (248)
T TIGR01832 82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI------------R 149 (248)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC------------C
Confidence 999999997542 1344567899999999988874 333 46899999986654221 2
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
...|..+|++.+.+.+ .+|+++++++||.+.++..
T Consensus 150 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~ 191 (248)
T TIGR01832 150 VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNT 191 (248)
T ss_pred CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcch
Confidence 3468899999887664 2489999999999988853
No 90
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.87 E-value=1.7e-21 Score=162.39 Aligned_cols=162 Identities=19% Similarity=0.130 Sum_probs=120.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++++++||||+|+||++++++|+++|++|++++|+++..+... .....++.++.+|++| .+++.+++..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG 80 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 35789999999999999999999999999999999877654322 1124578899999999 7777666542
Q ss_pred CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHH----HHHhcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVE----ACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
.+|+||||+|..... +++..+++|+.++.++++ .+++.+.++||++||...+... .
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~------------~ 148 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS------------A 148 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC------------C
Confidence 389999999864421 223456789998555554 4456677899999998544221 2
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
....|..+|.+.+.+.+ ..++++++++||.+.++..
T Consensus 149 ~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~ 191 (258)
T PRK12429 149 GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLV 191 (258)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhh
Confidence 24667788887776553 2589999999999998754
No 91
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.87 E-value=8.5e-21 Score=157.54 Aligned_cols=166 Identities=16% Similarity=0.188 Sum_probs=122.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh-hhh---ccccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
+++++++||||+||||++++++|+++|++|++++|+.+. .+. .+.....++.++++|++| .+++.+++..
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 457999999999999999999999999999999987543 211 111123467889999999 7777665541
Q ss_pred -CCcEEEEcCCCCC--CCCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhccchhhHHHH
Q 025456 135 -DSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI 209 (252)
Q Consensus 135 -~~d~vi~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~ 209 (252)
.+|+||||+|... ..++...+++|+.++.++++++.+. ..+++|++||........ .+. ...+..|+.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~---~~~~~~Y~~ 155 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKT---MPEYEPVAR 155 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccC---CccccHHHH
Confidence 3999999998643 2346677899999999999999754 235899999864321110 010 112578999
Q ss_pred HHHHHHHHHHH-------cCCcEEEEeCCcccCCC
Q 025456 210 AKLQAEQYIRK-------SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 210 sK~~~e~~~~~-------~gi~~~~lrPg~i~~~~ 237 (252)
+|+++|.+++. .++++++++||.+.++.
T Consensus 156 sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~ 190 (248)
T PRK07806 156 SKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTV 190 (248)
T ss_pred HHHHHHHHHHHHHHHhhccCeEEEEeCCccccCch
Confidence 99999987753 58999999999887753
No 92
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.87 E-value=2.1e-21 Score=162.20 Aligned_cols=161 Identities=19% Similarity=0.215 Sum_probs=123.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
+++++++||||+|+||.++++.|+++|++|++++|+.+..++.......++.++.+|++| .+++.+++.. ++|
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTR-QDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 457899999999999999999999999999999999876654333223468889999999 6666655542 489
Q ss_pred EEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHhc----C-CCEEEEEccceeeccCCCCCCCcchhccchh
Q 025456 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR----G-VNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (252)
Q Consensus 138 ~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~----~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~ 204 (252)
+||||+|.... .+++..+++|+.++.++++++... + .++||++||...... ..+.
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~~ 150 (257)
T PRK07067 83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG------------EALV 150 (257)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC------------CCCC
Confidence 99999986431 234556889999999999998532 1 258999999642111 1234
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..|+.+|++.+.+.+ +.|+++++|+||.++++.
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 190 (257)
T PRK07067 151 SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM 190 (257)
T ss_pred chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence 678999998887654 368999999999999875
No 93
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.87 E-value=7.6e-21 Score=158.05 Aligned_cols=162 Identities=17% Similarity=0.183 Sum_probs=122.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
+++++++||||+|+||++++++|+++|++|++++|+.+........ ...++.++++|++| .+++.+++.. +
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS-AEAVEALVDFVAARWGR 81 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999999987655432221 23468899999999 7777665541 4
Q ss_pred CcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 136 SEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 136 ~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
+|+||||+|..... +++..+++|+.++.++.+.+ ++.+.++||++||...+... ..
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~------------~~ 149 (252)
T PRK06138 82 LDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG------------RG 149 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC------------CC
Confidence 99999999975421 22344789999987766655 55677899999997543211 12
Q ss_pred hhHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccCCCC
Q 025456 204 FGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~~~~ 238 (252)
...|+.+|.+.+.+++. .|+++++++||++.++..
T Consensus 150 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~ 191 (252)
T PRK06138 150 RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYF 191 (252)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcch
Confidence 46789999988876542 489999999999988753
No 94
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.87 E-value=2.4e-21 Score=161.73 Aligned_cols=161 Identities=19% Similarity=0.181 Sum_probs=119.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
+++|+++||||+|+||++++++|+++|++|+++.++.+...+.+. ..++.++.+|++| .+++.+++.. ++|
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~--~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR--EKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVD 81 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH--hCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 457999999999999999999999999999988776543322222 1257889999999 7766665542 489
Q ss_pred EEEEcCCCCCC--------CCCCCcceehHHHHHHHHHH----HHhcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEA----CRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 138 ~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
+||||+|.... .+++..+++|+.++.++++. +++.+.++||++||...++.. .....
T Consensus 82 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 150 (255)
T PRK06463 82 VLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA-----------AEGTT 150 (255)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC-----------CCCcc
Confidence 99999987432 13445678999997665444 455556799999998655321 11235
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.|+.+|++.+.+.+ ..|+++++++||++.++..
T Consensus 151 ~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~ 190 (255)
T PRK06463 151 FYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMT 190 (255)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchh
Confidence 69999999887664 2589999999999988753
No 95
>PLN00016 RNA-binding protein; Provisional
Probab=99.87 E-value=5e-21 Score=168.73 Aligned_cols=154 Identities=18% Similarity=0.218 Sum_probs=116.6
Q ss_pred CCcEEEEE----cCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc-------c-CCCCeEEEEeeCCCChHHHHHHH
Q 025456 65 KQKKIFVA----GATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-------K-DNPSLQIVKADVTEGSAKLSEAI 132 (252)
Q Consensus 65 ~~~~vlVt----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-------~-~~~~~~~i~~Dl~d~~~~~~~~~ 132 (252)
.+++|+|| |||||||++|+++|+++|++|++++|+......... . ...+++++.+|+.| .+.+. ..
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d-~~~~~-~~ 128 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD-VKSKV-AG 128 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH-HHhhh-cc
Confidence 46899999 999999999999999999999999998754221110 0 12358899999876 33222 12
Q ss_pred cCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHH
Q 025456 133 GDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKL 212 (252)
Q Consensus 133 ~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~ 212 (252)
.+ +|+|||+++. +..++.+++++|++.|+++|||+||.++|+.....+..+.. +.++.. +|.
T Consensus 129 ~~-~d~Vi~~~~~------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~-~~~p~~----sK~ 190 (378)
T PLN00016 129 AG-FDVVYDNNGK------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGD-AVKPKA----GHL 190 (378)
T ss_pred CC-ccEEEeCCCC------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCC-cCCCcc----hHH
Confidence 34 9999999752 25578999999999999999999999999865443333321 122222 799
Q ss_pred HHHHHHHHcCCcEEEEeCCcccCCCC
Q 025456 213 QAEQYIRKSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 213 ~~e~~~~~~gi~~~~lrPg~i~~~~~ 238 (252)
.+|+++++.+++++++||++++|+..
T Consensus 191 ~~E~~l~~~~l~~~ilRp~~vyG~~~ 216 (378)
T PLN00016 191 EVEAYLQKLGVNWTSFRPQYIYGPGN 216 (378)
T ss_pred HHHHHHHHcCCCeEEEeceeEECCCC
Confidence 99999999999999999999999864
No 96
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.86 E-value=3.8e-21 Score=160.46 Aligned_cols=165 Identities=20% Similarity=0.146 Sum_probs=121.7
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh-hhh---ccccCCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
++++++++||||+|+||++++++|+++|++|++++|+.+. .++ .+.....++.++++|++| .+++.+.+..
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~ 83 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEAE 83 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999987542 222 122123468889999999 6666655432
Q ss_pred --CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 135 --DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 135 --~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
++|+||||+|.... .+++..+++|+.++..+++++ ++.+.++||++||...+....+
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------- 154 (254)
T PRK06114 84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG--------- 154 (254)
T ss_pred cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC---------
Confidence 48999999997532 234566889999998877765 4455579999999754321110
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.....|..+|++.+.+.+ ..|+++++|+||.+.++..
T Consensus 155 -~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~ 198 (254)
T PRK06114 155 -LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMN 198 (254)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccc
Confidence 013568899998887654 3589999999999988764
No 97
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.86 E-value=3.2e-21 Score=160.32 Aligned_cols=158 Identities=22% Similarity=0.229 Sum_probs=118.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCcEEE
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEAVV 140 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d~vi 140 (252)
|+++||||+|+||.++++.|+++|++|++++|++++.+........++.++.+|++| .+++.+.+.. ++|+||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 579999999999999999999999999999999876654332223468899999999 7766665531 399999
Q ss_pred EcCCCCCC---------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHH
Q 025456 141 CATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (252)
Q Consensus 141 ~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y 207 (252)
||+|.... .+++..+++|+.++.++++.+ ++.+.+++|++||...+.. ......|
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~~Y 147 (248)
T PRK10538 80 NNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP------------YAGGNVY 147 (248)
T ss_pred ECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC------------CCCCchh
Confidence 99986421 123455789999966665554 5567789999999754311 1224679
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 208 ~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+.+|.+.+.+.+ ..++++++++||.+.+.+
T Consensus 148 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 148 GATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE 184 (248)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence 999999887764 258999999999997543
No 98
>PRK08589 short chain dehydrogenase; Validated
Probab=99.86 E-value=3.4e-21 Score=162.43 Aligned_cols=160 Identities=17% Similarity=0.170 Sum_probs=119.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++|+++||||+|+||+++++.|+++|++|++++|+ +..++.. .....++.++.+|++| .+++.+++..
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999998 5443322 1123468899999999 6666554431
Q ss_pred CCcEEEEcCCCCCCC---------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 DSEAVVCATGFQPGW---------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~---------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|++|||||..... +++..+++|+.++..+++++ ++.+ ++||++||...+...
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------------ 148 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD------------ 148 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC------------
Confidence 489999999975311 23455688999987777665 4445 699999997544211
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.....|..+|++.+.+.+ +.|+++++|.||.+.++..
T Consensus 149 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~ 192 (272)
T PRK08589 149 LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLV 192 (272)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchh
Confidence 123679999999887765 3589999999999988753
No 99
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.86 E-value=2.8e-21 Score=161.17 Aligned_cols=163 Identities=17% Similarity=0.198 Sum_probs=123.5
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
++++++++||||+|+||++++++|+++|++|++++|+.++..+.. .....++.++.+|++| .+++.+.+..
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDI 84 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhc
Confidence 346899999999999999999999999999999999876654322 1123467788999999 6666655432
Q ss_pred -CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 -~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||+|.... .+++..+++|+.++.++++++. +.+.++||++||...... .
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~ 152 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG------------R 152 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC------------C
Confidence 38999999986431 2345678999999888888764 345579999999743211 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..+..|..+|++.+.+.+ +.|+++++|+||++.++..
T Consensus 153 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~ 196 (254)
T PRK08085 153 DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMT 196 (254)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcch
Confidence 234678999999887764 2589999999999998853
No 100
>PRK06398 aldose dehydrogenase; Validated
Probab=99.86 E-value=4.1e-21 Score=160.73 Aligned_cols=153 Identities=18% Similarity=0.164 Sum_probs=119.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
+++|+++||||+|+||++++++|+++|++|++++|+.... .++.++++|++| .+++.+++.. ++|
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~--------~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id 74 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY--------NDVDYFKVDVSN-KEQVIKGIDYVISKYGRID 74 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc--------CceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999875421 368889999999 6666655531 499
Q ss_pred EEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 138 ~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
+||||||.... .+++..+++|+.++.++++++. +.+.++||++||...+.. ...+.
T Consensus 75 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~ 142 (258)
T PRK06398 75 ILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV------------TRNAA 142 (258)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC------------CCCCc
Confidence 99999997431 1344567999999988888773 345579999999865421 12356
Q ss_pred HHHHHHHHHHHHHHH------cCCcEEEEeCCcccCCC
Q 025456 206 LTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 206 ~y~~sK~~~e~~~~~------~gi~~~~lrPg~i~~~~ 237 (252)
.|+.+|++.+.+.+. .++++++|+||.+.++.
T Consensus 143 ~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~ 180 (258)
T PRK06398 143 AYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPL 180 (258)
T ss_pred hhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchH
Confidence 799999999887652 24999999999998874
No 101
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.86 E-value=3.3e-21 Score=160.85 Aligned_cols=162 Identities=18% Similarity=0.234 Sum_probs=122.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++++++||||+|+||++++++|+++|++|++++|+++..++... ....++.++.+|++| .+++.+++..
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFG 81 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcC
Confidence 457999999999999999999999999999999998765543321 123568899999999 6666554431
Q ss_pred CCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHHHhc---CCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|+||||||.... .++...+++|+.++..+++++.+. ..++||++||...+.. ..
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~------------~~ 149 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS------------QP 149 (258)
T ss_pred CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC------------CC
Confidence 38999999986421 123455789999999999998542 2258999999754321 12
Q ss_pred hhhHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~~~~ 238 (252)
.+..|..+|.+.+.+++. .++++++++||.++++..
T Consensus 150 ~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 192 (258)
T PRK07890 150 KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPL 192 (258)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHH
Confidence 346788999998876652 489999999999998753
No 102
>PRK07985 oxidoreductase; Provisional
Probab=99.86 E-value=3.5e-21 Score=164.19 Aligned_cols=162 Identities=15% Similarity=0.192 Sum_probs=121.0
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCch--hhhh---ccccCCCCeEEEEeeCCCChHHHHHHHcC---
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD--KAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~--~~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--- 134 (252)
.+++++++||||+|+||++++++|+++|++|++..|+.+ ..++ .+.....++.++.+|++| .+++.+++..
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~ 124 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHK 124 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHH
Confidence 356899999999999999999999999999998776532 2211 122223467889999999 6666554432
Q ss_pred ---CCcEEEEcCCCCC---------CCCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 135 ---DSEAVVCATGFQP---------GWDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 135 ---~~d~vi~~ag~~~---------~~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
++|++|||||... ..++++.+++|+.++.++++++... .-++||++||...+...
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~----------- 193 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS----------- 193 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC-----------
Confidence 3899999998632 1234567899999999999988542 22689999998665321
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..+..|+.+|++.+.+.+ ..|+++++|+||++.++.
T Consensus 194 -~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 194 -PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence 123579999999887654 358999999999999985
No 103
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.86 E-value=9.5e-21 Score=157.99 Aligned_cols=159 Identities=21% Similarity=0.273 Sum_probs=120.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
+++++||||+|+||++++++|+++|++|++++|+++...+.. .....++.++.+|++| .+++.+++.+++|+||||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD-AIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC-HHHHHHHhcCCCCEEEEC
Confidence 579999999999999999999999999999999876543321 1123468899999999 788888877449999999
Q ss_pred CCCCCCC--------CCCCcceehHHHHHHHHHH----HHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHH
Q 025456 143 TGFQPGW--------DLFAPWKVDNFGTVNLVEA----CRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA 210 (252)
Q Consensus 143 ag~~~~~--------~~~~~~~~n~~g~~~ll~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~s 210 (252)
||..... +++..+++|+.++.++.+. +++.+.++||++||...+... .....|+.+
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~------------~~~~~Y~~s 148 (257)
T PRK09291 81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG------------PFTGAYCAS 148 (257)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC------------CCcchhHHH
Confidence 9965421 1334567898887766554 456667899999997432111 123578899
Q ss_pred HHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 211 KLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 211 K~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
|.+.|.+.+ ..|+++++|+||.+.++.
T Consensus 149 K~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~ 182 (257)
T PRK09291 149 KHALEAIAEAMHAELKPFGIQVATVNPGPYLTGF 182 (257)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEecCcccccc
Confidence 999887643 369999999999987654
No 104
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.86 E-value=6.4e-21 Score=158.29 Aligned_cols=162 Identities=17% Similarity=0.151 Sum_probs=122.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
+++++++||||+|+||.+++++|+++|++|++++|+++........ ...++.++.+|++| .+++.+++.. +
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGS 81 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999999999999998665433221 13458899999999 7777766542 3
Q ss_pred CcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 136 SEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 136 ~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
+|+|||++|.... .+++..+++|+.++.++++.+. +.+.++||++||...+... .
T Consensus 82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~ 149 (251)
T PRK07231 82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR------------P 149 (251)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC------------C
Confidence 8999999986431 1234567899998777777664 4566899999998655321 2
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
....|+.+|.+.+.+++ ..++++++++||.+.++..
T Consensus 150 ~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~ 192 (251)
T PRK07231 150 GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLL 192 (251)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcc
Confidence 34678899988876554 2489999999999988753
No 105
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.86 E-value=4.2e-21 Score=159.40 Aligned_cols=160 Identities=17% Similarity=0.196 Sum_probs=122.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
++++++||||+|+||++++++|+++|++|++++|+.+...+.. .....++.++++|++| .+++++++.. +
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999999999999876654322 1123568999999999 7777766541 3
Q ss_pred CcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 136 ~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
+|+||||+|.... .+++..+++|+.++.++++++. +.+.+++|++||...+.... .
T Consensus 81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~------------~ 148 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS------------G 148 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC------------C
Confidence 8999999986431 1233457899999998877763 55668999999986654321 2
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
...|+.+|++.+.+.+ ..++++++++||.++++.
T Consensus 149 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 149 EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence 3568899988776554 248999999999998874
No 106
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.86 E-value=2.6e-21 Score=163.53 Aligned_cols=159 Identities=25% Similarity=0.384 Sum_probs=120.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---c--CCCCeEEEEeeCCCChHHHHH---H---Hc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSE---A---IG 133 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~--~~~~~~~i~~Dl~d~~~~~~~---~---~~ 133 (252)
++++++||||+|+||+++++.|+++|++|++++|+++..+.... . ...+++++.+|++| .+++.+ . +.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHNFQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999998765543221 1 13468999999999 666554 2 23
Q ss_pred CCCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 134 DDSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 134 ~~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||+|..... ++++.+++|+.++.++++.+ ++.+.++||++||...+.. .
T Consensus 81 -~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~------------~ 147 (280)
T PRK06914 81 -RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG------------F 147 (280)
T ss_pred -CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC------------C
Confidence 389999999865421 22345679999988888775 5666789999999743211 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.....|+.+|.+.+.+++ ++|+++++++||.+.++.
T Consensus 148 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (280)
T PRK06914 148 PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI 190 (280)
T ss_pred CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence 234678899999887664 358999999999998874
No 107
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.86 E-value=9.4e-21 Score=158.81 Aligned_cols=162 Identities=19% Similarity=0.166 Sum_probs=122.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
+++++++||||+|+||++++++|+++|++|++++|+.+..+........++.++++|++| .+++.+.+.. ++|
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999999999999998876654433233468889999999 6666655431 499
Q ss_pred EEEEcCCCCCC------CC-------CCCcceehHHHHHHHHHHHHh---cCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 138 AVVCATGFQPG------WD-------LFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 138 ~vi~~ag~~~~------~~-------~~~~~~~n~~g~~~ll~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
+||||||+... .+ ++..+++|+.++.++++++.. ...+++|++||...+...
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------ 150 (263)
T PRK06200 83 CFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG------------ 150 (263)
T ss_pred EEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC------------
Confidence 99999996421 11 445689999999888888742 122689999998654221
Q ss_pred chhhHHHHHHHHHHHHHHH------cCCcEEEEeCCcccCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~~------~gi~~~~lrPg~i~~~~~ 238 (252)
.....|+.+|.+.+.+.+. .+++++.|.||.+.++..
T Consensus 151 ~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~ 193 (263)
T PRK06200 151 GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLR 193 (263)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCc
Confidence 1235689999998877652 359999999999988753
No 108
>PRK06194 hypothetical protein; Provisional
Probab=99.86 E-value=4.8e-21 Score=162.53 Aligned_cols=161 Identities=14% Similarity=0.127 Sum_probs=121.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
++++++|||||+||||++++++|+++|++|++++|+.+..++.. .....++.++.+|++| .+++.+++.+
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG 82 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 45789999999999999999999999999999999876544322 1123468889999999 7777766542
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHH----HHhcCC------CEEEEEccceeeccCCCCCCCc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEA----CRKRGV------NRFILISSILVNGAAMGQILNP 196 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~----~~~~~~------~~~v~~SS~~v~~~~~~~~~~~ 196 (252)
++|+||||||.... .+++..+++|+.|+.+++++ +.+.+. +++|++||...+...
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------- 155 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP------- 155 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-------
Confidence 38999999997542 12344578999999987777 444443 589999998655321
Q ss_pred chhccchhhHHHHHHHHHHHHHHH---------cCCcEEEEeCCcccCCC
Q 025456 197 AYIFLNVFGLTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 197 ~~~~~~~~~~y~~sK~~~e~~~~~---------~gi~~~~lrPg~i~~~~ 237 (252)
.....|+.+|++.+.+.+. .+++++.+.||.+.++.
T Consensus 156 -----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~ 200 (287)
T PRK06194 156 -----PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI 200 (287)
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc
Confidence 1246799999998877641 35889999999987764
No 109
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.86 E-value=6.1e-21 Score=158.51 Aligned_cols=159 Identities=20% Similarity=0.180 Sum_probs=121.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++++++||||+|+||.+++++|+++|++|++++|+.+..+... .....++.++.+|++| .+++.+.+..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 45799999999999999999999999999999999876543322 1123467889999999 6666554431
Q ss_pred CCcEEEEcCCCCCC-----------CCCCCcceehHHHHHHHHHHHHh----cCCCEEEEEccceeeccCCCCCCCcchh
Q 025456 135 DSEAVVCATGFQPG-----------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYI 199 (252)
Q Consensus 135 ~~d~vi~~ag~~~~-----------~~~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~~~ 199 (252)
++|+||||+|+... .++++.+++|+.++.++++++.. .+.++||++||..+|.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------ 150 (250)
T PRK07774 83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL------------ 150 (250)
T ss_pred CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC------------
Confidence 38999999997431 12334578999999999888853 3457999999986542
Q ss_pred ccchhhHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccCCCC
Q 025456 200 FLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~~~~ 238 (252)
+.+.|+.+|++.|.+++. .++++++++||.+.++..
T Consensus 151 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~ 193 (250)
T PRK07774 151 ---YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEAT 193 (250)
T ss_pred ---CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccc
Confidence 135689999999877642 479999999999988764
No 110
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.86 E-value=4.6e-21 Score=160.24 Aligned_cols=162 Identities=17% Similarity=0.228 Sum_probs=121.6
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCch--hhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD--KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
.+++++++||||+|+||.+++++|+++|++|+++.|+.. ...+.+.....++.++++|++| .+++.+.++.
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFG 90 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999999998732 1122222233568899999999 7766665541
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|++|||+|.... .+++..+++|+.++.++++++ ++.+.+++|++||...+... .
T Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~ 158 (258)
T PRK06935 91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG------------K 158 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC------------C
Confidence 38999999986431 134456789999987777665 45556799999998654221 2
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.+..|+.+|++.+.+.+ ..|+++++|+||.+.++.
T Consensus 159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 200 (258)
T PRK06935 159 FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN 200 (258)
T ss_pred CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence 24578999999987764 358999999999998875
No 111
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.86 E-value=9.1e-21 Score=156.79 Aligned_cols=163 Identities=23% Similarity=0.231 Sum_probs=123.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh----ccccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT----TLSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
+++++++||||+|+||++++++|+++|++|+++.|+.+...+ .......++.++.+|++| .+++.+.+.+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD-KAALEAAVAAAVERF 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC-HHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999887776554322 111134568999999999 7777666532
Q ss_pred -CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 -DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 -~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+|||++|..... ++...+++|+.++.++++.+ ++.+.++||++||...+...
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~------------ 150 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW------------ 150 (249)
T ss_pred CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC------------
Confidence 389999999964321 23455789999999998887 45677899999998665321
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~~ 239 (252)
.....|..+|.+.+.+++ +.+++++++|||.++++...
T Consensus 151 ~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~ 195 (249)
T PRK12825 151 PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKE 195 (249)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccc
Confidence 124678899988876553 35899999999999998743
No 112
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.86 E-value=4.1e-21 Score=159.37 Aligned_cols=160 Identities=19% Similarity=0.184 Sum_probs=120.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc------CCCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG------DDSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~------~~~d 137 (252)
+++++++||||+|+||++++++|+++|++|++++|+.+..++.......++.++++|++| .+++.+.+. +++|
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 357899999999999999999999999999999998765544333233467889999999 555444332 1399
Q ss_pred EEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccce-eeccCCCCCCCcchhccchhhH
Q 025456 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSIL-VNGAAMGQILNPAYIFLNVFGL 206 (252)
Q Consensus 138 ~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~-v~~~~~~~~~~~~~~~~~~~~~ 206 (252)
+||||+|.... .+++..+++|+.++.++++++... ..+++|++||.. .++. .....
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~-------------~~~~~ 149 (249)
T PRK06500 83 AVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM-------------PNSSV 149 (249)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC-------------CCccH
Confidence 99999986432 123456889999999999999641 235788877753 2321 12467
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 207 y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
|+.+|++.|.+++ ..|+++++++||.+.++.
T Consensus 150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 150 YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 9999999988773 248999999999999874
No 113
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=1.4e-20 Score=156.42 Aligned_cols=161 Identities=19% Similarity=0.199 Sum_probs=120.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEE-eecCchhhhhc---cccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKA-GVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~-~~r~~~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
+++++++||||+|+||++++++|+++|++|++ ..|+.+..++. +.....++.++.+|++| .+++.+++++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD-VEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999876 46766544332 11234568899999999 7766665542
Q ss_pred -CCcEEEEcCCCCCCCC--------CCCcceehHHHHHHHHHHHHh----cCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 -DSEAVVCATGFQPGWD--------LFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 -~~d~vi~~ag~~~~~~--------~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||+|...... +...+++|+.++.++++++.+ .+.++||++||...+.. .
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~ 148 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY------------L 148 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC------------C
Confidence 3899999998644221 223467999999998888753 45679999999754321 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..+..|+.+|.+.+.+++ +.|+++++|+||.+.++.
T Consensus 149 ~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~ 191 (250)
T PRK08063 149 ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA 191 (250)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence 234678999999998764 368999999999998765
No 114
>PRK08264 short chain dehydrogenase; Validated
Probab=99.86 E-value=8.8e-21 Score=156.51 Aligned_cols=157 Identities=26% Similarity=0.352 Sum_probs=123.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC--CCcEEE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV 140 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--~~d~vi 140 (252)
+++++++||||+|+||++++++|+++|+ +|++++|+.++..+ ...++.++.+|++| .+++.+.+.. ++|+||
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~vi 78 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTD-PASVAAAAEAASDVTILV 78 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCC-HHHHHHHHHhcCCCCEEE
Confidence 4578999999999999999999999998 99999998766543 23578999999999 7777777653 489999
Q ss_pred EcCCC-CCC--------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccchhhHH
Q 025456 141 CATGF-QPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (252)
Q Consensus 141 ~~ag~-~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y 207 (252)
|++|. ... .++...+++|+.++.++++++. +.+.++||++||...+.. ...+..|
T Consensus 79 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~------------~~~~~~y 146 (238)
T PRK08264 79 NNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN------------FPNLGTY 146 (238)
T ss_pred ECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC------------CCCchHh
Confidence 99997 321 1233457899999999988864 456678999999765432 1234679
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 208 ~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+.+|.+.+.+.+ +.++++++++||.+.++.
T Consensus 147 ~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 147 SASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 999999987654 248999999999998875
No 115
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.86 E-value=9.5e-21 Score=156.65 Aligned_cols=160 Identities=16% Similarity=0.221 Sum_probs=122.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
++|+++||||+|+||++++++|+++|++|++++|+++..+... .....++.++.+|++| .+++.+.+.. +
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999876554322 1123568899999999 6666555431 4
Q ss_pred CcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 136 ~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
+|+||||+|.... .+++..+++|+.++.++++.+ ++.+.+++|++||...++.. ..
T Consensus 84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~ 151 (241)
T PRK07454 84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF------------PQ 151 (241)
T ss_pred CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC------------CC
Confidence 9999999996432 123455789999988877765 45556799999998665322 22
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+..|..+|.+.+.+.+ ..|+++++|+||.+.++.
T Consensus 152 ~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~ 192 (241)
T PRK07454 152 WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPL 192 (241)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCc
Confidence 4678999999887653 358999999999998875
No 116
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.86 E-value=7.4e-21 Score=157.83 Aligned_cols=163 Identities=22% Similarity=0.225 Sum_probs=124.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhc---cccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++++++||||+|+||++++++|+++|++|++++|+.++.... +.....++.++.+|++| .+++.+.+.+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999999999999986544322 22233458899999999 7777776642
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|+||||+|.... .++...+++|+.++.++++++ ++.+.++||++||...++. +..
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~-----------~~~ 151 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV-----------GYP 151 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc-----------CCC
Confidence 38999999986542 123445789999999998887 3456679999999865411 112
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
....|+.+|.+++.+++ ..++++++++||+++++..
T Consensus 152 ~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~ 194 (251)
T PRK12826 152 GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMA 194 (251)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchh
Confidence 34678999998887654 2489999999999999753
No 117
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.86 E-value=6.3e-21 Score=159.45 Aligned_cols=166 Identities=20% Similarity=0.199 Sum_probs=124.5
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
++++++++||||+|+||.+++++|+++|++|++++|+.++.+... .....++.++++|++| .+++.+.+..
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERF 87 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999999999876654322 1123467889999999 7777554431
Q ss_pred -CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHhc-----CCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR-----GVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 135 -~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~-----~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
++|+||||+|.... .++.+.+++|+.++.++++++.+. +.++||++||...+....+.
T Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-------- 159 (259)
T PRK08213 88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-------- 159 (259)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc--------
Confidence 38999999986421 123455789999999999987543 56799999997554322110
Q ss_pred cchhhHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~~~ 237 (252)
..+...|..+|++.+.+++. .|+++++++||.+.++.
T Consensus 160 ~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~ 203 (259)
T PRK08213 160 VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKM 203 (259)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcc
Confidence 12346789999999877652 48999999999998865
No 118
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.86 E-value=5.2e-21 Score=160.07 Aligned_cols=160 Identities=18% Similarity=0.113 Sum_probs=121.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc-CCCCeEEEEeeCCCChHHHHHHHc-------CCCc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIG-------DDSE 137 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~-------~~~d 137 (252)
||+++||||+|+||++++++|+++|++|++++|+.+..++.... ...++.++++|++| .+++.+.+. +++|
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 47899999999999999999999999999999998766543321 13568999999999 666665543 2489
Q ss_pred EEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 138 AVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 138 ~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
+||||||..... +++..+++|+.++.++++++. +.+.++||++||....... ....
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~ 147 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ------------PGLA 147 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC------------CCch
Confidence 999999975421 234567899999999988873 4455799999997432111 1246
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.|+.+|++.+.+.+ ..++++++++||.+.++..
T Consensus 148 ~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~ 187 (260)
T PRK08267 148 VYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAML 187 (260)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccc
Confidence 78899998876654 2589999999999988653
No 119
>PRK09186 flagellin modification protein A; Provisional
Probab=99.86 E-value=6.4e-21 Score=158.95 Aligned_cols=171 Identities=21% Similarity=0.217 Sum_probs=118.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc-----CCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
+++|+++||||+|+||+++++.|+++|++|+++.|+++..++.... ....+.++.+|++| .+++.+++..
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 3579999999999999999999999999999999987665432211 12356778999999 7777666542
Q ss_pred --CCcEEEEcCCCCCC-----------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcc
Q 025456 135 --DSEAVVCATGFQPG-----------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPA 197 (252)
Q Consensus 135 --~~d~vi~~ag~~~~-----------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~ 197 (252)
++|+|||||+.... .++...+++|+.++..+++++ ++.+.++||++||...+....... .+.
T Consensus 81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~-~~~ 159 (256)
T PRK09186 81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEI-YEG 159 (256)
T ss_pred cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchh-ccc
Confidence 38999999975321 123345678887776665554 556778999999976432211100 011
Q ss_pred hhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
. +......|+.+|.+.+.+.+ ..++++++++||.+.++.
T Consensus 160 ~-~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~ 205 (256)
T PRK09186 160 T-SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ 205 (256)
T ss_pred c-ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence 1 11122469999998887764 358999999999887654
No 120
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.86 E-value=2.3e-20 Score=155.52 Aligned_cols=162 Identities=19% Similarity=0.158 Sum_probs=120.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEe-ecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHc------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG------ 133 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~------ 133 (252)
+++++++||||+|+||++++++|+++|++|+++ .|+.+..++... ....++.++.+|++| .+++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHh
Confidence 457999999999999999999999999999775 566554432221 123468899999999 777666554
Q ss_pred ------CCCcEEEEcCCCCCCCC--------CCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcc
Q 025456 134 ------DDSEAVVCATGFQPGWD--------LFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPA 197 (252)
Q Consensus 134 ------~~~d~vi~~ag~~~~~~--------~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~ 197 (252)
+++|+||||+|...... +...+++|+.++.++++++.+. ..+++|++||..++...
T Consensus 83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~-------- 154 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF-------- 154 (254)
T ss_pred ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC--------
Confidence 13899999998743211 2344679999999999998652 33689999998665321
Q ss_pred hhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.....|+.+|++.+.+.+ +.++++++++||.+.++..
T Consensus 155 ----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~ 198 (254)
T PRK12746 155 ----TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDIN 198 (254)
T ss_pred ----CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcch
Confidence 224578999999887653 2589999999999988753
No 121
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.85 E-value=1.6e-20 Score=158.69 Aligned_cols=162 Identities=22% Similarity=0.225 Sum_probs=121.6
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHc------
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG------ 133 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~------ 133 (252)
++++++++||||+|+||++++++|+++|++|++++|+.+..++... ....++.++++|++| .+++.+++.
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDF 85 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4568999999999999999999999999999999998765443221 123468889999999 666655543
Q ss_pred CCCcEEEEcCCCCCC-----------------------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceee
Q 025456 134 DDSEAVVCATGFQPG-----------------------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVN 186 (252)
Q Consensus 134 ~~~d~vi~~ag~~~~-----------------------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~ 186 (252)
+++|+||||||.... .+++..+++|+.++..+++.+ ++.+.++||++||...+
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~ 165 (278)
T PRK08277 86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF 165 (278)
T ss_pred CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence 149999999985321 123345789999987665554 45556799999998655
Q ss_pred ccCCCCCCCcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 187 GAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
... .....|+.+|++.+.+.+ ..|+++++|+||.+.++.
T Consensus 166 ~~~------------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 166 TPL------------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred CCC------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 321 224679999999987765 248999999999999885
No 122
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.85 E-value=8.7e-21 Score=158.13 Aligned_cols=163 Identities=19% Similarity=0.145 Sum_probs=121.5
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CC
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~ 136 (252)
++++++++||||+|+||.+++++|+++|++|++++|+.+..+........++.++.+|+++ .+++.+.+.. ++
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCC
Confidence 3468999999999999999999999999999999998754321111123457789999999 7666655532 38
Q ss_pred cEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHh----cCCCEEEEEccceeeccCCCCCCCcchhccchh
Q 025456 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (252)
Q Consensus 137 d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~ 204 (252)
|+||||+|.... .++.+.+++|+.++.++++++.. .+.++||++||....... ...
T Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~ 158 (255)
T PRK06841 91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL------------ERH 158 (255)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC------------CCC
Confidence 999999997532 12334678999999999998753 456799999997532111 123
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..|+.+|.+.+.+.+ ..|++++.|+||.+.++..
T Consensus 159 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~ 199 (255)
T PRK06841 159 VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELG 199 (255)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccc
Confidence 578899998876654 2589999999999988753
No 123
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.1e-20 Score=159.57 Aligned_cols=161 Identities=21% Similarity=0.274 Sum_probs=121.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+.+++++||||+|+||++++++|+++|++|++++|+.+...+... ....++.++.+|++| .+++.+++..
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 457899999999999999999999999999999998765433221 123468889999999 7777665542
Q ss_pred CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|+||||||..... ++...+++|+.++.++++.+. +.+.++||++||...+... .
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~------------~ 154 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR------------P 154 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC------------C
Confidence 389999999865321 123446899999999988864 3455789999998655322 1
Q ss_pred hhhHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccCCC
Q 025456 203 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~~~ 237 (252)
....|..+|++.|.+++. .|++++++|||.+.++.
T Consensus 155 ~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~ 196 (274)
T PRK07775 155 HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGM 196 (274)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcc
Confidence 235789999999987652 38999999999987764
No 124
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.85 E-value=1.3e-20 Score=172.69 Aligned_cols=171 Identities=20% Similarity=0.286 Sum_probs=125.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCC---eEEEeecCchhh------h-hccc-----------c------CCCCeEE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKA------K-TTLS-----------K------DNPSLQI 116 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~------~-~~~~-----------~------~~~~~~~ 116 (252)
.++++|+|||||||||.+|+++|++.+. +|+++.|..+.. . +++. . ...++.+
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 4689999999999999999999998753 689999965321 0 1110 0 1347899
Q ss_pred EEeeCCCC-----hHHHHHHHcCCCcEEEEcCCCCC-CCCCCCcceehHHHHHHHHHHHHhc-CCCEEEEEccceeeccC
Q 025456 117 VKADVTEG-----SAKLSEAIGDDSEAVVCATGFQP-GWDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVNGAA 189 (252)
Q Consensus 117 i~~Dl~d~-----~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~~v~~~~ 189 (252)
+.+|++++ ++..+.+..+ +|+|||+|+... ..+.+..+++|+.|+.+++++|++. +.++||++||.++||..
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~~-vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~ 275 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAKE-VDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQR 275 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHhc-CCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCC
Confidence 99999983 2345555566 999999998654 3345566889999999999999886 46889999999999876
Q ss_pred CCCCCCcchh---------------------------------------------------------ccchhhHHHHHHH
Q 025456 190 MGQILNPAYI---------------------------------------------------------FLNVFGLTLIAKL 212 (252)
Q Consensus 190 ~~~~~~~~~~---------------------------------------------------------~~~~~~~y~~sK~ 212 (252)
.+...+..+. .....+.|..+|+
T Consensus 276 ~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~ 355 (605)
T PLN02503 276 QGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKA 355 (605)
T ss_pred CCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHH
Confidence 4321110110 0111267999999
Q ss_pred HHHHHHHHc--CCcEEEEeCCcccC
Q 025456 213 QAEQYIRKS--GINYTIIRPGGLRN 235 (252)
Q Consensus 213 ~~e~~~~~~--gi~~~~lrPg~i~~ 235 (252)
.+|+++++. +++++++||+.|..
T Consensus 356 lAE~lV~~~~~~LPv~IvRPsiV~s 380 (605)
T PLN02503 356 MGEMVINSMRGDIPVVIIRPSVIES 380 (605)
T ss_pred HHHHHHHHhcCCCCEEEEcCCEecc
Confidence 999999764 79999999998844
No 125
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.85 E-value=1.1e-20 Score=157.51 Aligned_cols=161 Identities=17% Similarity=0.220 Sum_probs=118.9
Q ss_pred cCCCcEEEEEcCC--ChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc-CCCCeEEEEeeCCCChHHHHHHHc------
Q 025456 63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIG------ 133 (252)
Q Consensus 63 ~~~~~~vlVtGat--G~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~------ 133 (252)
.+++|+++||||+ ++||++++++|+++|++|++.+|+. +..+.+.+ ...++.++++|++| .++++++++
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERV 81 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 3568999999999 7999999999999999999999873 22222211 22467889999999 666655442
Q ss_pred CCCcEEEEcCCCCCC------------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchh
Q 025456 134 DDSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYI 199 (252)
Q Consensus 134 ~~~d~vi~~ag~~~~------------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~ 199 (252)
+++|++|||||.... .+++..+++|+.++.++++++... ..+++|++||.....
T Consensus 82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~------------ 149 (252)
T PRK06079 82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER------------ 149 (252)
T ss_pred CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc------------
Confidence 149999999996431 134456789999998888887432 126899999874321
Q ss_pred ccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+...+..|+.+|++.+.+.+ ..|+++++|.||.+.++.
T Consensus 150 ~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~ 194 (252)
T PRK06079 150 AIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLA 194 (252)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence 01235679999999987764 368999999999998875
No 126
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.2e-20 Score=158.17 Aligned_cols=161 Identities=21% Similarity=0.185 Sum_probs=122.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++++++||||+||||.+++++|+++|++|++++|+++..++... ....++.++.+|+++ .+++.+++..
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 568999999999999999999999999999999998765543221 123568899999999 7776655441
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHh-----cCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK-----RGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~-----~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||||.... .++...+++|+.++.++++++.. .+.+++|++||...... .
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~ 154 (263)
T PRK07814 87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA------------G 154 (263)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC------------C
Confidence 38999999986431 12445678999999999999853 45578999999743211 1
Q ss_pred chhhHHHHHHHHHHHHHHH------cCCcEEEEeCCcccCCC
Q 025456 202 NVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~~------~gi~~~~lrPg~i~~~~ 237 (252)
.....|+.+|.+++.+.+. .+++++.|+||.+.++.
T Consensus 155 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~ 196 (263)
T PRK07814 155 RGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSA 196 (263)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCch
Confidence 2346799999999877652 36899999999998764
No 127
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.2e-20 Score=157.16 Aligned_cols=161 Identities=20% Similarity=0.209 Sum_probs=117.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEee-cCchhhhhc---cccCCCCeEEEEeeCCCChHHHHHHH--------
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGV-RDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAI-------- 132 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~-r~~~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~-------- 132 (252)
++|+++||||+||||++++++|+++|++|++.. |+.+..+.. +......+..+.+|+++ .+++.+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES-LHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCC-HHHHHHHHHHHHHHhh
Confidence 579999999999999999999999999998865 444443321 11123457788999998 54443322
Q ss_pred ---c-CCCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcch
Q 025456 133 ---G-DDSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAY 198 (252)
Q Consensus 133 ---~-~~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~ 198 (252)
. +++|+||||||..... +++.++++|+.+++.+++++... +.++||++||...+...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------- 152 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL--------- 152 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC---------
Confidence 1 1499999999964321 24556789999999999887532 23699999998654221
Q ss_pred hccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.....|+.+|++.+.+++ ..|+++++|.||.+.++..
T Consensus 153 ---~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~ 196 (252)
T PRK12747 153 ---PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMN 196 (252)
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchh
Confidence 124679999999987664 3589999999999998863
No 128
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.4e-20 Score=162.83 Aligned_cols=162 Identities=15% Similarity=0.145 Sum_probs=123.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHc------C
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG------D 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~------~ 134 (252)
+++++++||||+|+||++++++|+++|++|++++|+.+..++... ....++.++.+|++| .+++.++++ +
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 457999999999999999999999999999999999877654322 234567889999999 777776653 2
Q ss_pred CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|++|||||+.... +++..+++|+.++.++++++ ++.+.++||++||...+... .
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~------------p 151 (330)
T PRK06139 84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ------------P 151 (330)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC------------C
Confidence 499999999964321 23346889999998877775 45555799999997544211 1
Q ss_pred hhhHHHHHHHHHHHHHH-------H-cCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~-~gi~~~~lrPg~i~~~~~ 238 (252)
.+..|..+|++.+.+.+ + .+++++.+.||.+.++..
T Consensus 152 ~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~ 195 (330)
T PRK06139 152 YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGF 195 (330)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccc
Confidence 24679999998765543 2 379999999999999864
No 129
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.2e-20 Score=157.52 Aligned_cols=162 Identities=19% Similarity=0.192 Sum_probs=123.0
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhh--hccccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK--TTLSKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
++++++++||||+|+||++++++|+++|++|++++|+++..+ +.+.....++.++.+|+++ .+++.+.+.+
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFG 82 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 467899999999999999999999999999999999876542 1111134568999999999 7767665542
Q ss_pred CCcEEEEcCCCCCC-------CCCCCcceehHHHHHHHHHHHHh---cCCCEEEEEccceeeccCCCCCCCcchhccchh
Q 025456 135 DSEAVVCATGFQPG-------WDLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (252)
Q Consensus 135 ~~d~vi~~ag~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~ 204 (252)
++|+||||+|.... .+++..+++|+.++.++++.+.+ .+.++||++||...+.. ...+
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------~~~~ 150 (258)
T PRK08628 83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG------------QGGT 150 (258)
T ss_pred CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC------------CCCC
Confidence 48999999996432 12345578999999998888742 23468999999754321 1234
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..|+.+|++.+.+++ ..+++++.|+||.++++.
T Consensus 151 ~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 151 SGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 679999999987765 258999999999999875
No 130
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.85 E-value=9.5e-21 Score=161.65 Aligned_cols=163 Identities=19% Similarity=0.191 Sum_probs=124.0
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHc------C
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIG------D 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~------~ 134 (252)
++++++++||||+|+||.++++.|+++|++|++++|+.+..++.... ....+..+++|++| .+++.+++. +
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence 45689999999999999999999999999999999998766543221 12356667799999 766665543 2
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHh---cCCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
++|+||||||+... .++++.+++|+.++.++++++.. ...++||++||...+... ..
T Consensus 85 ~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~ 152 (296)
T PRK05872 85 GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA------------PG 152 (296)
T ss_pred CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC------------CC
Confidence 49999999997532 12345678999999999888742 123689999998654321 22
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
+..|+.+|++.+.+.+ ..|++++++.||++.++..
T Consensus 153 ~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~ 194 (296)
T PRK05872 153 MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLV 194 (296)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhh
Confidence 4679999999987764 3689999999999988753
No 131
>PRK08643 acetoin reductase; Validated
Probab=99.85 E-value=8.8e-21 Score=158.25 Aligned_cols=159 Identities=23% Similarity=0.263 Sum_probs=118.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------CC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~ 136 (252)
+|+++||||+|+||+++++.|+++|++|++++|+.+...+.. .....++.++++|++| .+++.+.+.. ++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999999999999876544322 1123467889999999 6666655442 49
Q ss_pred cEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 137 EAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 137 d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
|+||||||+.... +++..+++|+.++.++++.+. +.+ .+++|++||...+... ..
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~ 148 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN------------PE 148 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC------------CC
Confidence 9999999875421 234557899999887777764 322 3589999997543211 12
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
...|+.+|++.+.+.+ +.|++++.|+||.+.++.
T Consensus 149 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 189 (256)
T PRK08643 149 LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM 189 (256)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence 3568999998876654 358999999999998875
No 132
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1e-20 Score=157.68 Aligned_cols=164 Identities=17% Similarity=0.206 Sum_probs=122.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHc------C
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG------D 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~------~ 134 (252)
+++|+++||||+|+||++++++|+++|++|++++|+.+..++... ....++..+.+|++| .+++.+++. +
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 468999999999999999999999999999999998766543321 123467889999999 666665543 1
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||+|.... .+++..+++|+.++.++++++. +.+ .+++|++||........ .
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~ 155 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV----------P 155 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC----------C
Confidence 49999999997532 1344567899999999888873 332 25799999874321000 0
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.....|+.+|++.+.+.+ +.|+++++|+||.+.++..
T Consensus 156 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~ 199 (253)
T PRK05867 156 QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELV 199 (253)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccc
Confidence 123579999999987764 3589999999999988753
No 133
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1e-20 Score=157.44 Aligned_cols=163 Identities=16% Similarity=0.188 Sum_probs=122.3
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
++++++++||||+|+||.+++++|+++|++|++++|+.+..+.... .....+.++++|++| .+++.+++..
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERH 83 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4568999999999999999999999999999999998765543222 123457889999999 6666554432
Q ss_pred -CCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 135 -DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 135 -~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
++|+||||+|.... .+++..+++|+.++.++++++ ++.+.+++|++||...+..
T Consensus 84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------ 151 (252)
T PRK07035 84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP------------ 151 (252)
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC------------
Confidence 38999999985321 123456789999988887776 4555679999998743221
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
...+..|+.+|++++.+++ ..|+++++|.||.+.++..
T Consensus 152 ~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~ 196 (252)
T PRK07035 152 GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFA 196 (252)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccc
Confidence 1234679999999987765 2589999999999988753
No 134
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.9e-20 Score=157.86 Aligned_cols=157 Identities=15% Similarity=0.248 Sum_probs=118.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc------CCCcEE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG------DDSEAV 139 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~------~~~d~v 139 (252)
||+++||||+|+||++++++|+++|++|++++|+.+..+.... .+++++.+|++| .+++.+.+. +++|+|
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~v 76 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA---AGFTAVQLDVND-GAALARLAEELEAEHGGLDVL 76 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---CCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEE
Confidence 4799999999999999999999999999999998776554332 357889999999 666665543 148999
Q ss_pred EEcCCCCCCC--------CCCCcceehHHHHHHHHHHHHh---cCCCEEEEEccceeeccCCCCCCCcchhccchhhHHH
Q 025456 140 VCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 208 (252)
Q Consensus 140 i~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~ 208 (252)
|||||..... +++..+++|+.++.++++++.. .+.+++|++||...+... .....|.
T Consensus 77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~ 144 (274)
T PRK05693 77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT------------PFAGAYC 144 (274)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC------------CCccHHH
Confidence 9999964321 2345578999999888888732 234689999997543211 1235689
Q ss_pred HHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 209 IAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 209 ~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.+|.+.+.+.+ +.|+++++++||.+.++..
T Consensus 145 ~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~ 181 (274)
T PRK05693 145 ASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFA 181 (274)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccc
Confidence 99998877643 3689999999999988754
No 135
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.85 E-value=9.8e-21 Score=156.64 Aligned_cols=161 Identities=17% Similarity=0.204 Sum_probs=119.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
+++++++||||+|+||++++++|+++|+.|++..|+.++.++.......++.++.+|++| .+++.+++.. ++|
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 457999999999999999999999999999988888776654333223468899999999 7666655431 399
Q ss_pred EEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 138 ~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
+||||+|.... .+++..+++|+.++.++++++. +.+.++||++||...+.... ...
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~ 150 (245)
T PRK12936 83 ILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP------------GQA 150 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC------------CCc
Confidence 99999987432 2344567899999988888763 34567999999974332111 124
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.|+.+|.+.+.+++ ..++++++++||.+.++.
T Consensus 151 ~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~ 189 (245)
T PRK12936 151 NYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAM 189 (245)
T ss_pred chHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCch
Confidence 57788886665543 358999999999987764
No 136
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.85 E-value=1.3e-20 Score=155.63 Aligned_cols=162 Identities=19% Similarity=0.199 Sum_probs=122.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHc------C
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG------D 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~------~ 134 (252)
+++++++||||+|+||.+++++|+++|++|++++|++...++.. .....++.++.+|+++ .+++.++++ +
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD-YEEVTAAIEQLKNELG 83 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 35789999999999999999999999999999999876543321 2123468889999999 777766664 1
Q ss_pred CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|+||||+|..... ++++.+++|+.++.++++++. +.+.+++|++||...+... .
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------~ 151 (239)
T PRK07666 84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA------------A 151 (239)
T ss_pred CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC------------C
Confidence 399999999864321 234557899999988888874 4556789999997543221 1
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
....|+.+|.+.+.+++ +.|+++++++||.+.++..
T Consensus 152 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~ 194 (239)
T PRK07666 152 VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMA 194 (239)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcch
Confidence 23568889988776653 3589999999999998754
No 137
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.85 E-value=1e-20 Score=157.37 Aligned_cols=161 Identities=19% Similarity=0.216 Sum_probs=119.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecC-chhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-------C
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-------D 135 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-------~ 135 (252)
+++++++||||+|+||+++++.|+++|++|+++.++ .+..+........++.++++|++| .+++.+++.. +
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTD-REQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHhCCC
Confidence 357899999999999999999999999999887654 333332222122468899999999 7777666542 2
Q ss_pred CcEEEEcCCCCCC--------------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcc
Q 025456 136 SEAVVCATGFQPG--------------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPA 197 (252)
Q Consensus 136 ~d~vi~~ag~~~~--------------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~ 197 (252)
+|++|||||.... .++.+.+++|+.++.++++++. +.+.+++|++||.....
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------- 151 (253)
T PRK08642 82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN---------- 151 (253)
T ss_pred CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC----------
Confidence 8999999986310 1123458899999999999884 34557999999863221
Q ss_pred hhccchhhHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccCCC
Q 025456 198 YIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~~~ 237 (252)
+..++..|+.+|.+.+.+++. .|++++.|+||.+.++.
T Consensus 152 --~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~ 196 (253)
T PRK08642 152 --PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTD 196 (253)
T ss_pred --CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCch
Confidence 122356799999999987752 58999999999998864
No 138
>PRK09242 tropinone reductase; Provisional
Probab=99.85 E-value=1.1e-20 Score=157.74 Aligned_cols=163 Identities=16% Similarity=0.159 Sum_probs=123.8
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc---C--CCCeEEEEeeCCCChHHHHHHHcC---
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---D--NPSLQIVKADVTEGSAKLSEAIGD--- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~---~--~~~~~~i~~Dl~d~~~~~~~~~~~--- 134 (252)
.+++|+++||||+|+||++++++|+++|++|++++|+.+..++.... . ..++.++.+|+++ .+++.+.+..
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~ 84 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVED 84 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999987665432211 1 3468889999999 6665544431
Q ss_pred ---CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchh
Q 025456 135 ---DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYI 199 (252)
Q Consensus 135 ---~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~ 199 (252)
++|+||||+|.... .+++..+++|+.++.++++++. +.+.++||++||...+...
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~---------- 154 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV---------- 154 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC----------
Confidence 49999999997421 2344567899999999988763 4556799999998654321
Q ss_pred ccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.....|..+|.+.+.+++ ..|++++.++||.+.++..
T Consensus 155 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~ 198 (257)
T PRK09242 155 --RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLT 198 (257)
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccc
Confidence 224568899998887664 3589999999999988864
No 139
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.2e-20 Score=158.30 Aligned_cols=162 Identities=17% Similarity=0.204 Sum_probs=119.6
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cC--CCCeEEEEeeCCCChHHHHHHHcC---
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KD--NPSLQIVKADVTEGSAKLSEAIGD--- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~--~~~~~~i~~Dl~d~~~~~~~~~~~--- 134 (252)
++++++++||||+|+||++++++|+++|++|++++|++++.++... .. ..++.++.+|++| .+++.+++..
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~ 83 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEA 83 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999998766543221 11 2367889999999 6666554431
Q ss_pred ---CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchh
Q 025456 135 ---DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYI 199 (252)
Q Consensus 135 ---~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~ 199 (252)
++|+||||||.... .++...+++|+.+..++++.+ ++.+.++||++||...+...
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 153 (265)
T PRK07062 84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE---------- 153 (265)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC----------
Confidence 48999999997431 134456788888877766655 44555799999998543211
Q ss_pred ccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..+..|..+|++.+.+.+ +.|++++.|+||.+.++.
T Consensus 154 --~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 196 (265)
T PRK07062 154 --PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQ 196 (265)
T ss_pred --CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence 123568888888776553 368999999999998875
No 140
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.85 E-value=1.2e-20 Score=157.28 Aligned_cols=163 Identities=16% Similarity=0.123 Sum_probs=121.7
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh-hhhccccCCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
++++++++||||+|+||.+++++|+++|++|+++++.... ..+.+.....++..+++|++| .+++.++++. +
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFGH 85 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4568999999999999999999999999999988765432 112222123467889999999 7666665542 4
Q ss_pred CcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 136 ~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
+|++|||||.... .+++..+++|+.++.++++++. +.+ -+++|++||...+... .
T Consensus 86 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~ 153 (253)
T PRK08993 86 IDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG------------I 153 (253)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC------------C
Confidence 9999999997431 2355678999999998888873 332 2589999998655322 1
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
....|+.+|++.+.+.+ +.|++++.++||.+.++..
T Consensus 154 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~ 196 (253)
T PRK08993 154 RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNT 196 (253)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcch
Confidence 13578899999887664 3589999999999998753
No 141
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.85 E-value=1.6e-20 Score=157.63 Aligned_cols=163 Identities=17% Similarity=0.150 Sum_probs=123.1
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
++.+++++||||+|+||.+++++|+++|++|+++.|+.++.++.. .....++.++++|++| .+++.+++..
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 456899999999999999999999999999999999876654322 1123468899999999 7766665532
Q ss_pred -CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 -~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||+|.... .++...+++|+.++..+++.+ ++.+.++||++||...... .
T Consensus 86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------~ 153 (265)
T PRK07097 86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG------------R 153 (265)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC------------C
Confidence 48999999997542 124455789999988777776 3456679999999643111 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..+..|+.+|.+.+.+.+ +.|++++.|+||.+.++..
T Consensus 154 ~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 197 (265)
T PRK07097 154 ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQT 197 (265)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccch
Confidence 234678999999887664 3589999999999988753
No 142
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.85 E-value=1.9e-20 Score=156.19 Aligned_cols=163 Identities=18% Similarity=0.208 Sum_probs=122.8
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
++++++|+||||+|+||++++++|+++|++|++++|+.+..+... .....++.++.+|++| .+++.+++..
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKL 86 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 456899999999999999999999999999999998876543321 1123468889999999 7666655432
Q ss_pred -CCcEEEEcCCCCCC-------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 -DSEAVVCATGFQPG-------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 -~~d~vi~~ag~~~~-------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|+||||+|.... .+++..+++|+.++.++++++. +.+.+++|++||...... ..
T Consensus 87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~ 154 (255)
T PRK06113 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK------------NI 154 (255)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC------------CC
Confidence 48999999986432 1233447899999999999885 344469999999754211 12
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.+..|+.+|++.+.+++ ..|++++++.||.+.++..
T Consensus 155 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~ 197 (255)
T PRK06113 155 NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDAL 197 (255)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccc
Confidence 34679999999987764 2589999999999988753
No 143
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.1e-20 Score=159.33 Aligned_cols=162 Identities=23% Similarity=0.284 Sum_probs=122.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc---C--CCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---D--NPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~---~--~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
+++++++||||+|+||+++++.|+++|++|++++|+++..+..... . ..++.++.+|++| .+++.+.+..
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999987654332211 1 2468889999999 6666665541
Q ss_pred --CCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHHHh----cCCCEEEEEccceeeccCCCCCCCcchh
Q 025456 135 --DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYI 199 (252)
Q Consensus 135 --~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~~~ 199 (252)
++|+||||+|.... .++...+++|+.++.++++++.+ .+.++||++||...+...
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------- 153 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH---------- 153 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC----------
Confidence 38999999985321 12345678899999999887643 344689999998654221
Q ss_pred ccchhhHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccCCCC
Q 025456 200 FLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~~~~ 238 (252)
...+.|+.+|++.|.+++. .++++++++||.+.++..
T Consensus 154 --~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~ 197 (276)
T PRK05875 154 --RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLV 197 (276)
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccc
Confidence 2347799999999987752 479999999999988754
No 144
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2.8e-20 Score=153.05 Aligned_cols=151 Identities=20% Similarity=0.222 Sum_probs=116.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-----CCcEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-----DSEAV 139 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-----~~d~v 139 (252)
.+|+++||||+|+||++++++|+++|++|+++.|+.+.. ...+++.+|++| .+++.+.+.. ++|+|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~v 72 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD--------FPGELFACDLAD-IEQTAATLAQINEIHPVDAI 72 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc--------cCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEE
Confidence 468999999999999999999999999999999986531 123578999999 7766665541 38999
Q ss_pred EEcCCCCCCC--------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHH
Q 025456 140 VCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (252)
Q Consensus 140 i~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y 207 (252)
|||+|..... ++...+++|+.++.++.+++ ++.+.+++|++||...|+.. ....|
T Consensus 73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------~~~~Y 139 (234)
T PRK07577 73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL-------------DRTSY 139 (234)
T ss_pred EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC-------------CchHH
Confidence 9999975421 23345788999987776665 55667899999998655321 13678
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 208 ~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..+|.+.+.+++ +.|+++++++||.+.++.
T Consensus 140 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 176 (234)
T PRK07577 140 SAAKSALVGCTRTWALELAEYGITVNAVAPGPIETEL 176 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence 999998887654 358999999999998875
No 145
>PRK05865 hypothetical protein; Provisional
Probab=99.85 E-value=2.7e-20 Score=175.81 Aligned_cols=132 Identities=21% Similarity=0.330 Sum_probs=115.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~ 146 (252)
|+|+||||+||||++++++|+++|++|++++|+.... . ..+++++.+|++| .+++.+++.+ +|+|||||+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~---~~~v~~v~gDL~D-~~~l~~al~~-vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W---PSSADFIAADIRD-ATAVESAMTG-ADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c---ccCceEEEeeCCC-HHHHHHHHhC-CCEEEECCCcc
Confidence 4799999999999999999999999999999875321 1 1368899999999 8889999998 99999999864
Q ss_pred CCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHcCCcEE
Q 025456 147 PGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYT 226 (252)
Q Consensus 147 ~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ 226 (252)
.. .+++|+.++.+++++|++.++++||++||.. |.++|+++++++++++
T Consensus 73 ~~-----~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------------------K~aaE~ll~~~gl~~v 121 (854)
T PRK05865 73 GR-----NDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------------------QPRVEQMLADCGLEWV 121 (854)
T ss_pred cc-----hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------------------HHHHHHHHHHcCCCEE
Confidence 32 4689999999999999999999999999851 7888998888999999
Q ss_pred EEeCCcccCCC
Q 025456 227 IIRPGGLRNEP 237 (252)
Q Consensus 227 ~lrPg~i~~~~ 237 (252)
++||+++||+.
T Consensus 122 ILRp~~VYGP~ 132 (854)
T PRK05865 122 AVRCALIFGRN 132 (854)
T ss_pred EEEeceEeCCC
Confidence 99999999985
No 146
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.4e-20 Score=156.81 Aligned_cols=158 Identities=17% Similarity=0.162 Sum_probs=121.0
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CC
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~ 136 (252)
++++|+++||||+|+||++++++|+++|++|++++|+.+.. . ...++.++++|++| .+++.+.+.. ++
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---~--~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 76 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET---V--DGRPAEFHAADVRD-PDQVAALVDAIVERHGRL 76 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---h--cCCceEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 35689999999999999999999999999999999987541 1 23468899999999 6666665532 38
Q ss_pred cEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHHh-----cCCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 137 EAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRK-----RGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 137 d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~~-----~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
|+||||||..... +++..+++|+.++.++++++.. .+.++||++||...+.. ...
T Consensus 77 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~------------~~~ 144 (252)
T PRK07856 77 DVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP------------SPG 144 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC------------CCC
Confidence 9999999964321 2345678999999999998743 23468999999854321 122
Q ss_pred hhHHHHHHHHHHHHHHH------cCCcEEEEeCCcccCCCC
Q 025456 204 FGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~~------~gi~~~~lrPg~i~~~~~ 238 (252)
+..|..+|.+.+.+++. ..++++.++||.+.++..
T Consensus 145 ~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~ 185 (252)
T PRK07856 145 TAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQS 185 (252)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHH
Confidence 46799999999887652 238999999999988753
No 147
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.85 E-value=1.3e-20 Score=156.87 Aligned_cols=158 Identities=23% Similarity=0.201 Sum_probs=118.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHH-------HcCC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEA-------IGDD 135 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~-------~~~~ 135 (252)
+++++||||+|+||++++++|+++|++|++++|+.+..+.... ....++.++.+|++| .+++.++ +.+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~- 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGG- 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCC-
Confidence 4689999999999999999999999999999998765543221 123468899999999 7655443 344
Q ss_pred CcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 136 SEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 136 ~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
+|+|||++|..... +++..+++|+.++.++++.+ ++.+.+++|++||...+... ..
T Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~------------~~ 146 (255)
T TIGR01963 79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS------------PF 146 (255)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC------------CC
Confidence 89999999864321 12344678999988887776 56677899999997554321 12
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
...|..+|.+.+.+.+ ..+++++++|||.++++.
T Consensus 147 ~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~ 187 (255)
T TIGR01963 147 KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL 187 (255)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence 3567888887776654 248999999999998874
No 148
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.85 E-value=1.9e-20 Score=156.14 Aligned_cols=160 Identities=19% Similarity=0.207 Sum_probs=118.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh-hhh---ccccCCCCeEEEEeeCCCChHHHHHHHc------CC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIG------DD 135 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~------~~ 135 (252)
+|+++||||+|+||++++++|+++|++|++++|+... ..+ .+.....++.++.+|++| .+++.++++ ++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 4799999999999999999999999999999986532 221 111123468999999999 666655543 14
Q ss_pred CcEEEEcCCCCCC----------CCCCCcceehHHHHHHHHHHHHhc-----C-----CCEEEEEccceeeccCCCCCCC
Q 025456 136 SEAVVCATGFQPG----------WDLFAPWKVDNFGTVNLVEACRKR-----G-----VNRFILISSILVNGAAMGQILN 195 (252)
Q Consensus 136 ~d~vi~~ag~~~~----------~~~~~~~~~n~~g~~~ll~~~~~~-----~-----~~~~v~~SS~~v~~~~~~~~~~ 195 (252)
+|+||||+|.... .++++.+++|+.++.++++++.+. + .++||++||...+...
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------ 154 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS------ 154 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC------
Confidence 8999999986431 223455789999999998887431 1 4679999997653221
Q ss_pred cchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 196 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 196 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
...+.|+.+|.+.+.+.+ ++|+++++++||.+.++..
T Consensus 155 ------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~ 198 (256)
T PRK12745 155 ------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMT 198 (256)
T ss_pred ------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccc
Confidence 123578899999887654 3689999999999988753
No 149
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.85 E-value=6.6e-20 Score=153.57 Aligned_cols=159 Identities=15% Similarity=0.207 Sum_probs=121.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------CC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~ 136 (252)
+++++||||+|+||.++++.|+++|++|++++|+....+... .....++.++.+|++| .+++.+++.. ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999876544321 2234568899999999 7776665541 38
Q ss_pred cEEEEcCCCCCCCC---------CCCcceehHHHHHHHHHHHHh---cCCCEEEEEccceeeccCCCCCCCcchhccchh
Q 025456 137 EAVVCATGFQPGWD---------LFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (252)
Q Consensus 137 d~vi~~ag~~~~~~---------~~~~~~~n~~g~~~ll~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~ 204 (252)
|+||||+|...... +.+.+++|+.++.++++.+.. .+.+++|++||...+... ...
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~ 147 (263)
T PRK06181 80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV------------PTR 147 (263)
T ss_pred CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC------------CCc
Confidence 99999998754321 123478999999999998842 234689999997655321 224
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..|+.+|.+.+.+.+ +.++++++++||.+.++.
T Consensus 148 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~ 187 (263)
T PRK06181 148 SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDI 187 (263)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCc
Confidence 679999999887764 358999999999998875
No 150
>PRK12742 oxidoreductase; Provisional
Probab=99.85 E-value=1.3e-20 Score=155.26 Aligned_cols=161 Identities=17% Similarity=0.247 Sum_probs=118.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecC-chhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC--CCcEEE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV 140 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--~~d~vi 140 (252)
+++++++||||+|+||++++++|+++|++|+++.|+ .+..++... ..++.++.+|++| .+++.+.+.. ++|++|
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~--~~~~~~~~~D~~~-~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ--ETGATAVQTDSAD-RDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH--HhCCeEEecCCCC-HHHHHHHHHHhCCCcEEE
Confidence 458999999999999999999999999999887664 333332221 1246788899999 7767666543 499999
Q ss_pred EcCCCCCC--------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHH
Q 025456 141 CATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA 210 (252)
Q Consensus 141 ~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~s 210 (252)
||+|.... .+++..+++|+.++.+++..+... +.+++|++||...... +......|+.+
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~~Y~~s 149 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM-----------PVAGMAAYAAS 149 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC-----------CCCCCcchHHh
Confidence 99987432 134566889999999887666432 2368999999743110 11234679999
Q ss_pred HHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 211 KLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 211 K~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
|++.+.+++ +.|+++++|+||.+.++..
T Consensus 150 Kaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~ 184 (237)
T PRK12742 150 KSALQGMARGLARDFGPRGITINVVQPGPIDTDAN 184 (237)
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcc
Confidence 999987664 3589999999999988753
No 151
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.85 E-value=2.3e-20 Score=155.74 Aligned_cols=163 Identities=20% Similarity=0.227 Sum_probs=123.3
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
.++++++++||||+|+||++++++|+++|++|++++|+++..+... .....++.++.+|++| .+++.+++++
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAE 85 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHh
Confidence 3457899999999999999999999999999999999876544322 1133468899999999 6666655542
Q ss_pred --CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 135 --DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 135 --~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
++|+||||+|.... .++++.+++|+.++.++.+.+ ++.+.++||++||...+...
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------- 154 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR----------- 154 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC-----------
Confidence 48999999996432 123455789999998888666 34566899999997543211
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.....|+.+|.+.+.+++ ..+++++.|+||.+.++.
T Consensus 155 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 197 (256)
T PRK06124 155 -AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET 197 (256)
T ss_pred -CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence 123678899998877654 248999999999999885
No 152
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2.4e-20 Score=158.71 Aligned_cols=163 Identities=16% Similarity=0.194 Sum_probs=122.4
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh-h---hccccCCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-K---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~---~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+.. + +.+.....++.++.+|++| .+++.+.+..
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~~ 121 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVRE 121 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999998875322 1 1122123468899999999 6666655532
Q ss_pred --CCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 --DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 --~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||||.... .++...+++|+.++.++++++... ..++||++||...|....
T Consensus 122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~----------- 190 (290)
T PRK06701 122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE----------- 190 (290)
T ss_pred cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC-----------
Confidence 48999999986431 123456889999999999998642 235899999987654321
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
....|..+|.+.+.+.+ ..|++++.|+||.+.++..
T Consensus 191 -~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~ 233 (290)
T PRK06701 191 -TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLI 233 (290)
T ss_pred -CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccc
Confidence 13468899998887654 2589999999999998753
No 153
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2.2e-20 Score=154.70 Aligned_cols=157 Identities=17% Similarity=0.186 Sum_probs=118.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc----------CC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG----------DD 135 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~----------~~ 135 (252)
|++++||||+|+||++++++|+++|++|++++|+.+... ......++.++++|++| .+++.+.+. ++
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AAAAGERLAEVELDLSD-AAAAAAWLAGDLLAAFVDGAS 77 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hhccCCeEEEEEeccCC-HHHHHHHHHHHHHHHhccCCC
Confidence 468999999999999999999999999999999865322 11123468899999999 666665321 14
Q ss_pred CcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 136 SEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 136 ~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
+|++|||+|.... .+++..+++|+.++..+++.+ ++.+.++||++||...+.. ..
T Consensus 78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~ 145 (243)
T PRK07023 78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA------------YA 145 (243)
T ss_pred ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC------------CC
Confidence 8999999986432 123566899999977766655 3445579999999864421 23
Q ss_pred hhhHHHHHHHHHHHHHH------HcCCcEEEEeCCcccCCC
Q 025456 203 VFGLTLIAKLQAEQYIR------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~------~~gi~~~~lrPg~i~~~~ 237 (252)
.+..|+.+|.+.|.+++ ..+++++.|+||.+.++.
T Consensus 146 ~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 186 (243)
T PRK07023 146 GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGM 186 (243)
T ss_pred CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHH
Confidence 45789999999998775 248999999999997764
No 154
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.7e-20 Score=156.30 Aligned_cols=162 Identities=17% Similarity=0.169 Sum_probs=122.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhc---cccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++++++||||+|+||.+++++|+++|++|++++|+.+..++. +.....++.++.+|++| .+++.+++..
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4679999999999999999999999999999999987654332 22234568899999999 6666655432
Q ss_pred CCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 ~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||+|.... .++++.+++|+.++.++++++ ++.+.+++|++||...+...
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~------------ 151 (253)
T PRK06172 84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA------------ 151 (253)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC------------
Confidence 38999999986421 134456789999987776654 44555799999998654322
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..+..|..+|++.+.+.+ ..|++++++.||.+.++..
T Consensus 152 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~ 195 (253)
T PRK06172 152 PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMF 195 (253)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhh
Confidence 234679999999887664 2479999999999988753
No 155
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.85 E-value=1.7e-20 Score=157.45 Aligned_cols=153 Identities=20% Similarity=0.241 Sum_probs=117.8
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CC
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~ 136 (252)
++++++++||||+|+||++++++|+++|++|++++|+..... ..++.++.+|++| .+++.+++.. ++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 78 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------HENYQFVPTDVSS-AEEVNHTVAEIIEKFGRI 78 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------cCceEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 456899999999999999999999999999999998765432 2468889999999 6666655432 48
Q ss_pred cEEEEcCCCCCC-----------------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCC
Q 025456 137 EAVVCATGFQPG-----------------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILN 195 (252)
Q Consensus 137 d~vi~~ag~~~~-----------------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~ 195 (252)
|+||||||.... .+++..+++|+.++.++++++. +.+.++||++||...+...
T Consensus 79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 152 (266)
T PRK06171 79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS------ 152 (266)
T ss_pred CEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC------
Confidence 999999996421 1233467899999999988875 3344689999998543211
Q ss_pred cchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCccc
Q 025456 196 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLR 234 (252)
Q Consensus 196 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~ 234 (252)
.....|+.+|.+.+.+.+ ..|+++++|+||.+.
T Consensus 153 ------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 153 ------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 124678999999887664 358999999999885
No 156
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.9e-20 Score=162.33 Aligned_cols=161 Identities=16% Similarity=0.168 Sum_probs=120.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHc------C
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG------D 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~------~ 134 (252)
+++++++||||+|+||++++++|+++|++|++++|+.+..++.. .....++.++.+|++| .++++++++ +
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 45799999999999999999999999999999999877654322 1134568899999999 777766543 1
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHH----HHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNL----VEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~l----l~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|++|||+|.... .+++..+++|+.++.++ ++.+++.+.++||++||...+... .
T Consensus 85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~------------~ 152 (334)
T PRK07109 85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI------------P 152 (334)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC------------C
Confidence 49999999996432 12345578888876664 444556666799999998765321 1
Q ss_pred hhhHHHHHHHHHHHHHH-------H--cCCcEEEEeCCcccCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------K--SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~--~gi~~~~lrPg~i~~~~ 237 (252)
....|..+|++.+.+.+ . .++++++|+||.+.++.
T Consensus 153 ~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~ 196 (334)
T PRK07109 153 LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ 196 (334)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch
Confidence 24679999998776543 1 36999999999998874
No 157
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.85 E-value=4e-20 Score=153.49 Aligned_cols=161 Identities=21% Similarity=0.287 Sum_probs=120.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---c--CCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~--~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++++||||+|+||++++++|+++|++|++++|+++..++... . ...+++++++|++| .+++.+.+..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999999999999876543221 1 13468899999999 6666554431
Q ss_pred CCcEEEEcCCCCCCCC--------CCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPGWD--------LFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~~--------~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|+||||||+..... +...+++|+.++.++++++ ++.+.++||++||....... ..
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~ 149 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL-----------PG 149 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC-----------CC
Confidence 3999999999754321 2345689999998888876 35566799999997543211 11
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
+...|+.+|++.+.+.+ ..++++++++||++.++..
T Consensus 150 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~ 192 (248)
T PRK08251 150 VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMN 192 (248)
T ss_pred CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhh
Confidence 24678999998886653 2479999999999988754
No 158
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.85 E-value=5.4e-20 Score=153.57 Aligned_cols=161 Identities=19% Similarity=0.247 Sum_probs=116.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchh-hhhc---ccc-CCCCeEEEEeeCCCChHHHHHHHc-----
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDK-AKTT---LSK-DNPSLQIVKADVTEGSAKLSEAIG----- 133 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~-~~~~---~~~-~~~~~~~i~~Dl~d~~~~~~~~~~----- 133 (252)
.+++|+||||+|+||++++++|+++| ++|++++|+++. .++. +.. ...+++++++|++| .+++.+.++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~ 85 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAAFAG 85 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHHHhc
Confidence 36899999999999999999999995 999999998765 3321 111 22368999999999 655443332
Q ss_pred CCCcEEEEcCCCCCC--CCCC------CcceehHHHHHH----HHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 134 DDSEAVVCATGFQPG--WDLF------APWKVDNFGTVN----LVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 134 ~~~d~vi~~ag~~~~--~~~~------~~~~~n~~g~~~----ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
+++|++|||+|.... ..+. +.+++|+.++.+ +++.+++.+.++||++||...+.. .
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~------------~ 153 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV------------R 153 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC------------C
Confidence 249999999987532 1121 247899988776 566667777789999999753211 0
Q ss_pred chhhHHHHHHHHHHHHH-------HHcCCcEEEEeCCcccCCCC
Q 025456 202 NVFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~-------~~~gi~~~~lrPg~i~~~~~ 238 (252)
.....|+.+|++.+.+. +.+++++++++||++.++..
T Consensus 154 ~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~ 197 (253)
T PRK07904 154 RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMS 197 (253)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchh
Confidence 12345889999876543 34689999999999988643
No 159
>PLN02778 3,5-epimerase/4-reductase
Probab=99.85 E-value=2.1e-20 Score=159.58 Aligned_cols=147 Identities=17% Similarity=0.161 Sum_probs=107.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcCC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG 144 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ag 144 (252)
.|+||||||+||||++|++.|+++|++|+... .|+.| .+.+...+.. ++|+|||+||
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------~~~~~-~~~v~~~l~~~~~D~ViH~Aa 66 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------GRLEN-RASLEADIDAVKPTHVFNAAG 66 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------CccCC-HHHHHHHHHhcCCCEEEECCc
Confidence 47899999999999999999999999987432 23444 4555555553 3899999998
Q ss_pred CCCC-------CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCC------CCCCCcchhccchhhHHHHHH
Q 025456 145 FQPG-------WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAM------GQILNPAYIFLNVFGLTLIAK 211 (252)
Q Consensus 145 ~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~------~~~~~~~~~~~~~~~~y~~sK 211 (252)
.... .++.+.+++|+.|+.+++++|++.+++ ++++||..+|+... +.+..+++.+..+.+.|+.+|
T Consensus 67 ~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK 145 (298)
T PLN02778 67 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTK 145 (298)
T ss_pred ccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHH
Confidence 7532 233456789999999999999999985 56667777776432 112344444444447899999
Q ss_pred HHHHHHHHHcCCcEEEEeCCcccCC
Q 025456 212 LQAEQYIRKSGINYTIIRPGGLRNE 236 (252)
Q Consensus 212 ~~~e~~~~~~gi~~~~lrPg~i~~~ 236 (252)
.++|.+++.+. +..++|++..+++
T Consensus 146 ~~~E~~~~~y~-~~~~lr~~~~~~~ 169 (298)
T PLN02778 146 AMVEELLKNYE-NVCTLRVRMPISS 169 (298)
T ss_pred HHHHHHHHHhh-ccEEeeecccCCc
Confidence 99999987653 5677888765554
No 160
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.84 E-value=5.7e-20 Score=152.35 Aligned_cols=162 Identities=17% Similarity=0.176 Sum_probs=121.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCc----hhhhhc---cccCCCCeEEEEeeCCCChHHHHHHHc---
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL----DKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIG--- 133 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~----~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~--- 133 (252)
+++++++||||+|+||++++++|+++|++|++++|.. +..++. ......++.++.+|++| .+++.+.+.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~ 82 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRD-FAATRAALDAGV 82 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHH
Confidence 3578999999999999999999999999999877642 222211 11123568899999999 777766653
Q ss_pred ---CCCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH-----hcCCCEEEEEccceeeccCCCCCCCcc
Q 025456 134 ---DDSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR-----KRGVNRFILISSILVNGAAMGQILNPA 197 (252)
Q Consensus 134 ---~~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~-----~~~~~~~v~~SS~~v~~~~~~~~~~~~ 197 (252)
+++|+||||+|..... ++...+++|+.++.++++++. +.+.+++|++||...+...
T Consensus 83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------- 154 (249)
T PRK12827 83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN-------- 154 (249)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC--------
Confidence 1389999999975421 233457899999999999987 4566799999997654321
Q ss_pred hhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..+..|..+|++.+.+++ ..++++++++||.+.++..
T Consensus 155 ----~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~ 198 (249)
T PRK12827 155 ----RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA 198 (249)
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence 224568899998776654 2489999999999998764
No 161
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.84 E-value=3.4e-20 Score=153.24 Aligned_cols=164 Identities=22% Similarity=0.207 Sum_probs=122.1
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
++++++++||||+|+||.+++++|+++|++|++++|++++..... .....++.++.+|++| .+++.+++.+
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAF 80 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 345789999999999999999999999999999999876643322 1134568899999999 6666655542
Q ss_pred -CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 -DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 -~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
.+|+|||++|..... ++...++.|+.++.++++++. +.+.++||++||...... .
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~------------~ 148 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG------------N 148 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC------------C
Confidence 379999999864321 123457889999999888873 556789999999743211 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~~ 239 (252)
..+..|..+|.+.+.+.+ +.+++++++|||.+.++...
T Consensus 149 ~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~ 193 (246)
T PRK05653 149 PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE 193 (246)
T ss_pred CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence 234668888987765543 35899999999999887643
No 162
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.2e-20 Score=153.64 Aligned_cols=173 Identities=18% Similarity=0.210 Sum_probs=136.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHC--CCeEEEeecCc--hhhhhccc-cCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEE
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDL--DKAKTTLS-KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVV 140 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~--~~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi 140 (252)
++++||||.||||++.++.+... .++.+.++.=. ..+..+.+ ...++.+++++|+.+ ...+.-.+.. ++|.|+
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~-~~~~~~~~~~~~id~vi 85 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIAD-ADLVLYLFETEEIDTVI 85 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccc-hHHHHhhhccCchhhhh
Confidence 89999999999999999999986 35555544311 11111111 145789999999999 6666666654 699999
Q ss_pred EcCCCCC----CCCCCCcceehHHHHHHHHHHHHhc-CCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHH
Q 025456 141 CATGFQP----GWDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAE 215 (252)
Q Consensus 141 ~~ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e 215 (252)
|.|+..+ ..++.+....|+.++..|+++++.. ++++||++||..|||++.+...+.+....+|.++|+++|+++|
T Consensus 86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE 165 (331)
T KOG0747|consen 86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE 165 (331)
T ss_pred hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence 9998654 3456677789999999999999988 5899999999999999877665545567788999999999999
Q ss_pred HHHH----HcCCcEEEEeCCcccCCCCCC
Q 025456 216 QYIR----KSGINYTIIRPGGLRNEPPTG 240 (252)
Q Consensus 216 ~~~~----~~gi~~~~lrPg~i~~~~~~~ 240 (252)
.+++ ++|++++++|.++||||.+..
T Consensus 166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~ 194 (331)
T KOG0747|consen 166 MLVRSYGRSYGLPVVTTRMNNVYGPNQYP 194 (331)
T ss_pred HHHHHHhhccCCcEEEEeccCccCCCcCh
Confidence 9876 478999999999999998643
No 163
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.84 E-value=4.2e-20 Score=153.66 Aligned_cols=156 Identities=15% Similarity=0.201 Sum_probs=120.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
+++|+++||||+|+||++++++|+++|++|++++|+. .. ....++.++++|++| .+++.+.+++ ++|
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~~----~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 78 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--LT----QEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLD 78 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--hh----hcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5679999999999999999999999999999999976 11 123568899999999 7777666542 389
Q ss_pred EEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 138 AVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 138 ~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
+||||+|..... ++...+++|+.++.++++++. +.+.++||++||...... ...+.
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~------------~~~~~ 146 (252)
T PRK08220 79 VLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP------------RIGMA 146 (252)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC------------CCCCc
Confidence 999999875321 234567899999999988873 345578999999743211 12346
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.|+.+|.+.+.+.+ .+|+++++++||.+.++..
T Consensus 147 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~ 186 (252)
T PRK08220 147 AYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQ 186 (252)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhh
Confidence 78999998887663 3689999999999998853
No 164
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.84 E-value=7.8e-20 Score=150.51 Aligned_cols=161 Identities=20% Similarity=0.192 Sum_probs=120.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc-CCCCeEEEEeeCCCChHHHHHHHcC------CC
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~------~~ 136 (252)
+++++++||||+|+||++++++|+++|++|++++|++.+..+.... ....++++.+|++| .+++.+.++. ++
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 4579999999999999999999999999999999987654332211 12457888999999 6666655541 38
Q ss_pred cEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccchh
Q 025456 137 EAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (252)
Q Consensus 137 d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~ 204 (252)
|+|||++|..... ++.+.+++|+.++.++++++. +.+.+++|++||...++.. ...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~ 151 (239)
T PRK12828 84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG------------PGM 151 (239)
T ss_pred CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC------------CCc
Confidence 9999999864311 123446799999999888873 4567899999998765432 124
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..|..+|.+.+.+++ +.++++++++||+++++.
T Consensus 152 ~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~ 191 (239)
T PRK12828 152 GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP 191 (239)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 568888987776553 358999999999999874
No 165
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.84 E-value=3.1e-20 Score=153.74 Aligned_cols=161 Identities=16% Similarity=0.161 Sum_probs=123.6
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC--CCcEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV 140 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--~~d~vi 140 (252)
++++++++||||+|+||+++++.|+++|++|++++|+.++.++... ..+..++.+|++| .+++.+.+.. ++|+||
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~-~~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG--ETGCEPLRLDVGD-DAAIRAALAAAGAFDGLV 82 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCeEEEecCCC-HHHHHHHHHHhCCCCEEE
Confidence 3567999999999999999999999999999999998766544322 1246788999999 7777776653 489999
Q ss_pred EcCCCCCC--------CCCCCcceehHHHHHHHHHHHHh----cC-CCEEEEEccceeeccCCCCCCCcchhccchhhHH
Q 025456 141 CATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RG-VNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (252)
Q Consensus 141 ~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~----~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y 207 (252)
||+|.... .++++.+++|+.++.++++++.+ .+ .++||++||...+... ..+..|
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~y 150 (245)
T PRK07060 83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL------------PDHLAY 150 (245)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC------------CCCcHh
Confidence 99987542 12445567999999999988854 22 3689999997654321 124679
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 208 ~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..+|.+++.+++ ..+++++.++||.+.++..
T Consensus 151 ~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 188 (245)
T PRK07060 151 CASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMA 188 (245)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchh
Confidence 999999987654 2489999999999998763
No 166
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.84 E-value=6.1e-20 Score=153.18 Aligned_cols=163 Identities=23% Similarity=0.312 Sum_probs=123.4
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
++++++++||||+|+||++++++|+++|++|+++.|+.+..++... ....++.++.+|+++ .+++.+.+..
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 4568999999999999999999999999999999999876544322 123468899999999 7777666542
Q ss_pred -CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcC--------CCEEEEEccceeeccCCCCC
Q 025456 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG--------VNRFILISSILVNGAAMGQI 193 (252)
Q Consensus 135 -~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~--------~~~~v~~SS~~v~~~~~~~~ 193 (252)
++|+||||+|.... .+++..+++|+.++.++++++. +.. .+++|++||...+..
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----- 159 (258)
T PRK06949 85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV----- 159 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC-----
Confidence 48999999996432 1344567899999998888764 221 258999999754421
Q ss_pred CCcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 194 LNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 194 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
......|+.+|.+.+.+.+ ..++++++|+||++.++..
T Consensus 160 -------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 160 -------LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred -------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence 1224678899998877654 2589999999999998764
No 167
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.84 E-value=2.5e-20 Score=155.96 Aligned_cols=162 Identities=17% Similarity=0.191 Sum_probs=120.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc-CCCCeEEEEeeCCCChHHHHHHHcC------CC
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~------~~ 136 (252)
+++++++||||+|+||++++++|+++|++|++++|+.+..+..... ...++.++.+|++| ++++.+++.. ++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERFGGL 87 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999999987655432211 11257889999999 7766655531 39
Q ss_pred cEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHH----HhcCC-CEEEEEccceeeccCCCCCCCcchhccc
Q 025456 137 EAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGV-NRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 137 d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~----~~~~~-~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
|+|||++|.... .++...+++|+.++.++++++ +..+. ++|+++||...... ..
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~------------~~ 155 (264)
T PRK12829 88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG------------YP 155 (264)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC------------CC
Confidence 999999997521 123456789999999988887 33444 57888887643211 11
Q ss_pred hhhHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~~~~ 238 (252)
.+..|+.+|.+.|.+++. .+++++++|||+++++..
T Consensus 156 ~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~ 198 (264)
T PRK12829 156 GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM 198 (264)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence 235688999988877642 489999999999988753
No 168
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.84 E-value=4.9e-20 Score=152.64 Aligned_cols=159 Identities=19% Similarity=0.269 Sum_probs=119.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc----cCCCCeEEEEeeCCCChHHHHHHHcC---CCcE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD---DSEA 138 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~i~~Dl~d~~~~~~~~~~~---~~d~ 138 (252)
||+++||||+|+||.+++++|+++|++|++++|+++..+.... ....+++++++|++| .+++.+.+.+ ++|+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~d~ 79 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILD-TASHAAFLDSLPALPDI 79 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC-hHHHHHHHHHHhhcCCE
Confidence 4799999999999999999999999999999999876543221 123578999999999 7777766553 3799
Q ss_pred EEEcCCCCCCC-----C---CCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccchhhH
Q 025456 139 VVCATGFQPGW-----D---LFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (252)
Q Consensus 139 vi~~ag~~~~~-----~---~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~ 206 (252)
||||+|..... + +.+.+++|+.++.++++++. +.+.++||++||....... .....
T Consensus 80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~ 147 (243)
T PRK07102 80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR------------ASNYV 147 (243)
T ss_pred EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC------------CCCcc
Confidence 99999864321 1 22457899999999988864 3466799999997432111 12346
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 207 y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
|+.+|.+.+.+.+ +.|+++++++||.+.++.
T Consensus 148 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~ 185 (243)
T PRK07102 148 YGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPM 185 (243)
T ss_pred cHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChh
Confidence 8899998876653 358999999999998874
No 169
>PRK09135 pteridine reductase; Provisional
Probab=99.84 E-value=8.2e-20 Score=151.37 Aligned_cols=161 Identities=17% Similarity=0.156 Sum_probs=118.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh-hhhc---ccc-CCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTT---LSK-DNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~---~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
++++++||||+||||++++++|+++|++|++++|+... .+.. +.. ....+.++.+|++| .+++.+++..
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAAF 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999986432 2211 111 12458889999999 7777666542
Q ss_pred -CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHhc---CCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 -~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|+||||+|.... .+++..+++|+.++.++++++... ..+.++++++... ..+.+
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 151 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA------------ERPLK 151 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh------------cCCCC
Confidence 38999999986432 123456789999999999998532 2246776665421 11234
Q ss_pred hhhHHHHHHHHHHHHHHH------cCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~~------~gi~~~~lrPg~i~~~~~ 238 (252)
+...|+.+|+++|.+++. .++++++++||+++++..
T Consensus 152 ~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~ 193 (249)
T PRK09135 152 GYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPED 193 (249)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccc
Confidence 567899999999987753 269999999999999874
No 170
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.84 E-value=6.7e-20 Score=151.05 Aligned_cols=162 Identities=20% Similarity=0.246 Sum_probs=120.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
+++++++||||+|+||++++++|+++|++|++++|+++...+.... ...+++++++|++| .+++.+.+.+ +
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRD-EADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 3478999999999999999999999999999999988665433221 11568899999999 7766665541 3
Q ss_pred CcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHHh---cCCCEEEEEccceeeccCCCCCCCcchhccchh
Q 025456 136 SEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (252)
Q Consensus 136 ~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~ 204 (252)
+|+|||++|..... ++.+.+++|+.++.++++++.+ .+.+++|++||...+.. ....
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------~~~~ 150 (237)
T PRK07326 83 LDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF------------FAGG 150 (237)
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC------------CCCC
Confidence 99999999864321 1335578899999998888753 34568999999754321 1224
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..|..+|++.+.+.+ ..|+++++++||.+.++..
T Consensus 151 ~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~ 191 (237)
T PRK07326 151 AAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFN 191 (237)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccc
Confidence 568889987776543 3589999999999987653
No 171
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.84 E-value=6.1e-20 Score=153.19 Aligned_cols=160 Identities=18% Similarity=0.180 Sum_probs=118.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
+++++|+||||+|+||.+++++|+++|++|++++|+.+..++..... ...++++|++| .+++.+.+.. ++|
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV--GGLFVPTDVTD-EDAVNALFDTAAETYGSVD 81 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCcEEEeeCCC-HHHHHHHHHHHHHHcCCCC
Confidence 56899999999999999999999999999999999876554332211 23678999999 7777666642 489
Q ss_pred EEEEcCCCCCCC----------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccce-eeccCCCCCCCcchhccc
Q 025456 138 AVVCATGFQPGW----------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSIL-VNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 138 ~vi~~ag~~~~~----------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~-v~~~~~~~~~~~~~~~~~ 202 (252)
+||||+|..... +++..+++|+.++.++++.+ ++.+.+++|++||.. +++.. .
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~------------~ 149 (255)
T PRK06057 82 IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA------------T 149 (255)
T ss_pred EEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC------------C
Confidence 999999864311 13455789999988877765 345557899999863 33321 1
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.+..|+.+|++.+.+.+ ..|+++++++||++.++..
T Consensus 150 ~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~ 192 (255)
T PRK06057 150 SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLL 192 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchh
Confidence 23568899987665543 3589999999999988764
No 172
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.84 E-value=3.9e-20 Score=156.17 Aligned_cols=160 Identities=15% Similarity=0.202 Sum_probs=116.1
Q ss_pred CCCcEEEEEcCC--ChHHHHHHHHHHHCCCeEEEeecCch---hhhhccccCCCCeEEEEeeCCCChHHHHHHHc-----
Q 025456 64 VKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG----- 133 (252)
Q Consensus 64 ~~~~~vlVtGat--G~iG~~l~~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~----- 133 (252)
+++|+++||||+ ++||++++++|+++|++|++.+|+.. ..++........ .++++|++| .+++.++++
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d-~~~v~~~~~~i~~~ 80 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSK-PEHFKSLAESLKKD 80 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCC-HHHHHHHHHHHHHH
Confidence 468999999997 79999999999999999999988742 222221111223 678999999 666665543
Q ss_pred -CCCcEEEEcCCCCCC------------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcch
Q 025456 134 -DDSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAY 198 (252)
Q Consensus 134 -~~~d~vi~~ag~~~~------------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~ 198 (252)
+++|++|||||+... .+++..+++|+.++.++++.+... .-++||++||.....
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~----------- 149 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK----------- 149 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc-----------
Confidence 249999999997421 134556899999998888877421 125899999874221
Q ss_pred hccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+...+..|..+|++.+.+.+ .+|+++++|.||.+.++.
T Consensus 150 -~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~ 194 (274)
T PRK08415 150 -YVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLA 194 (274)
T ss_pred -CCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence 01124679999999887654 368999999999998864
No 173
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.84 E-value=1.4e-19 Score=152.29 Aligned_cols=159 Identities=15% Similarity=0.196 Sum_probs=119.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHc------CCCc
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG------DDSE 137 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~------~~~d 137 (252)
|+++||||+|+||++++++|+++|++|++++|+.+..+... ...+.++.++++|++| .+++.+.+. +++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999999999999999876654322 1234578899999999 666666554 1499
Q ss_pred EEEEcCCCCCCC--------CCCCcceehHHHHHHHHHH----HHhcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 138 AVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEA----CRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 138 ~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
+||||+|..... +++..+++|+.++.++.+. +++.+.++||++||...+... ....
T Consensus 80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~~ 147 (270)
T PRK05650 80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG------------PAMS 147 (270)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC------------CCch
Confidence 999999975422 2334568998888776665 456677899999998554221 2246
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.|..+|++.+.+.+ ..|+++++++||.+.++..
T Consensus 148 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 187 (270)
T PRK05650 148 SYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLL 187 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcc
Confidence 78999998765543 2589999999999988753
No 174
>PRK12743 oxidoreductase; Provisional
Probab=99.84 E-value=3.6e-20 Score=154.70 Aligned_cols=160 Identities=18% Similarity=0.185 Sum_probs=118.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCc-hhhhh---ccccCCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~-~~~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
+++++||||+|+||++++++|+++|++|+++.++. +..+. .+.....++.++.+|++| .+++.+++.. +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999998886543 33222 111134578999999999 6666554432 4
Q ss_pred CcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHHh----cC-CCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 136 SEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRK----RG-VNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 136 ~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~~----~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
+|+||||+|..... ++...+++|+.++.++++++.. .+ .++||++||..... +..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~------------~~~ 148 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT------------PLP 148 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC------------CCC
Confidence 99999999875421 2345578999999999988743 22 35899999974211 122
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
....|+.+|++.+.+++ ..|++++.|+||.+.++..
T Consensus 149 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~ 191 (256)
T PRK12743 149 GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMN 191 (256)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccc
Confidence 35689999999887654 3589999999999998753
No 175
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.84 E-value=5.1e-20 Score=153.89 Aligned_cols=158 Identities=18% Similarity=0.164 Sum_probs=116.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc----C-CCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----D-NPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~----~-~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++++||||+|+||++++++|+++|++|++++|+....+..... . ..++.++.+|++| .+++.+++..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 57999999999999999999999999999999987654332211 1 1468899999999 6666655432
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEcccee-eccCCCCCCCcchhc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILV-NGAAMGQILNPAYIF 200 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v-~~~~~~~~~~~~~~~ 200 (252)
++|+||||+|.... .+++..+++|+.++.++++++. +.+ .+++|++||... ++.
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------------ 148 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS------------ 148 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC------------
Confidence 48999999986432 1234557899999887777763 344 369999998642 221
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.....|+.+|++.+.+++ +.|+++++++||.+++..
T Consensus 149 -~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~ 191 (259)
T PRK12384 149 -KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSP 191 (259)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccch
Confidence 123568999998776543 468999999999876543
No 176
>PRK06484 short chain dehydrogenase; Validated
Probab=99.84 E-value=2.9e-20 Score=170.35 Aligned_cols=163 Identities=18% Similarity=0.193 Sum_probs=125.7
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CC
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~ 136 (252)
...+|+++||||+|+||++++++|+++|++|++++|+.+..++.......++..+.+|++| .+++.+++.. ++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 3468999999999999999999999999999999998776654433233467788999999 6666655532 49
Q ss_pred cEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 137 EAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 137 d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
|+||||||.... .+++..+++|+.++.++++++... +.++||++||...+.. ...+.
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~ 412 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA------------LPPRN 412 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC------------CCCCc
Confidence 999999997521 134566899999999999887542 3369999999854321 12346
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.|+.+|++.+.+.+ +.|+++++|.||.+.++..
T Consensus 413 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~ 452 (520)
T PRK06484 413 AYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAV 452 (520)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchh
Confidence 79999999987764 3589999999999998753
No 177
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.84 E-value=2.9e-20 Score=155.72 Aligned_cols=162 Identities=15% Similarity=0.154 Sum_probs=115.4
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecC-chhhhhc---ccc-CCCCeEEEEeeCCCChHHHHHHHcC---
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTT---LSK-DNPSLQIVKADVTEGSAKLSEAIGD--- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~-~~~~~~~---~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~--- 134 (252)
++++|+++||||+++||++++++|+++|++|+++.|+ .+..+.. +.. ...++.++.+|++| .+++.+.+..
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~ 83 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDE 83 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHH
Confidence 4578999999999999999999999999999887654 3333221 111 23468899999999 6666655542
Q ss_pred ---CCcEEEEcCCCCCC--------------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCC
Q 025456 135 ---DSEAVVCATGFQPG--------------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQI 193 (252)
Q Consensus 135 ---~~d~vi~~ag~~~~--------------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~ 193 (252)
++|++|||||.... .++...+++|+.+...+.+.+ ++.+.++||++||......
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----- 158 (260)
T PRK08416 84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY----- 158 (260)
T ss_pred hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC-----
Confidence 48999999985321 123345677887766655544 4445569999999743211
Q ss_pred CCcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 194 LNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 194 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
...+..|+.+|++.+.+.+ ..|+++++|.||.+.++.
T Consensus 159 -------~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~ 202 (260)
T PRK08416 159 -------IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDA 202 (260)
T ss_pred -------CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChh
Confidence 1124578899999987764 258999999999998875
No 178
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.84 E-value=5.5e-20 Score=152.47 Aligned_cols=161 Identities=20% Similarity=0.219 Sum_probs=116.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeec-Cchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
++|+++||||+|+||++++++|+++|++|++..+ +.....+.+. .....+..+.+|++| .+++.+++.+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 5789999999999999999999999999887544 3333222221 123457788999999 6666655431
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|+||||+|.... .+++..+++|+.++.++++++ ++.+.++||++||...... ..
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~ 148 (246)
T PRK12938 81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG------------QF 148 (246)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC------------CC
Confidence 49999999997532 234566789999977766654 4566779999999743211 12
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.+..|..+|.+.+.+.+ ..|+++++++||.+.++..
T Consensus 149 ~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~ 191 (246)
T PRK12938 149 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV 191 (246)
T ss_pred CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchh
Confidence 34678899998776553 3589999999999998753
No 179
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.83 E-value=6.2e-20 Score=154.85 Aligned_cols=162 Identities=14% Similarity=0.177 Sum_probs=118.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh-------h---hccccCCCCeEEEEeeCCCChHHHHHHHc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-------K---TTLSKDNPSLQIVKADVTEGSAKLSEAIG 133 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-------~---~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 133 (252)
+++++++||||+|+||++++++|+++|++|++++|+.+.. + +.+.....++.++++|+++ .+++.+.+.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~ 82 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAVA 82 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHH
Confidence 4679999999999999999999999999999999976421 1 1111123468899999999 776666554
Q ss_pred C------CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHh----cCCCEEEEEccceeeccCCCCCCC
Q 025456 134 D------DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILN 195 (252)
Q Consensus 134 ~------~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~ 195 (252)
. ++|+||||||.... .+++..+++|+.++.++++++.. .+-+++|++||.....
T Consensus 83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-------- 154 (273)
T PRK08278 83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD-------- 154 (273)
T ss_pred HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc--------
Confidence 1 49999999996432 12345678999999999998842 3346899998863211
Q ss_pred cchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCc-ccCC
Q 025456 196 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGG-LRNE 236 (252)
Q Consensus 196 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~-i~~~ 236 (252)
+.+ ...+..|+.+|++.+.+++ ..+++++.|.||. +.++
T Consensus 155 ~~~--~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~ 201 (273)
T PRK08278 155 PKW--FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA 201 (273)
T ss_pred ccc--cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH
Confidence 000 0235689999999998765 2589999999994 5554
No 180
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1e-19 Score=152.52 Aligned_cols=161 Identities=16% Similarity=0.186 Sum_probs=120.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHc-----CCC
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIG-----DDS 136 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~-----~~~ 136 (252)
+++++++||||+|+||.+++++|+++|++|++++|+.+..++.... ...++.++.+|++| .+++.+.++ +++
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI 81 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 4579999999999999999999999999999999987665443221 23578899999999 666655543 238
Q ss_pred cEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccchh
Q 025456 137 EAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (252)
Q Consensus 137 d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~ 204 (252)
|+||||||..... ++...+++|+.|+.++++.+. +.+.+++|++||...+... ...
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~ 149 (263)
T PRK09072 82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY------------PGY 149 (263)
T ss_pred CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC------------CCc
Confidence 9999999875421 223456899999999988874 3445689999886432111 123
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..|+.+|.+.+.+++ ..+++++++.||.+.++.
T Consensus 150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~ 189 (263)
T PRK09072 150 ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAM 189 (263)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccc
Confidence 568899998776553 358999999999998765
No 181
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.83 E-value=5.7e-20 Score=153.94 Aligned_cols=162 Identities=20% Similarity=0.156 Sum_probs=119.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh--ccccCCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT--TLSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
+++++++||||+|+||++++++|+++|++|++++|+...... .+.....++.++.+|++| .+++.+++.. +
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 457999999999999999999999999999999998642211 111123467889999999 7666665542 4
Q ss_pred CcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 136 SEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 136 ~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
+|+||||+|..... ++++.+++|+.++.++++++. +.+.++||++||...... +...
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~ 151 (263)
T PRK08226 83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV-----------ADPG 151 (263)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc-----------CCCC
Confidence 89999999964321 233457899999999888864 344568999998642100 0112
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+..|+.+|.+.+.+.+ +.+++++.++||.+.++.
T Consensus 152 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~ 192 (263)
T PRK08226 152 ETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPM 192 (263)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHH
Confidence 4678999998887664 248999999999998875
No 182
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.83 E-value=7.6e-20 Score=151.38 Aligned_cols=161 Identities=22% Similarity=0.290 Sum_probs=120.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh-hh---ccccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-KT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
.++++++||||+|+||++++++|+++|++|+++.|+.... .. .+.....++.++.+|++| .+++.+.+..
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAF 81 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 3579999999999999999999999999998887764321 11 122234578899999999 7777666542
Q ss_pred -CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 135 -~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
++|+||||+|.... .+++..+++|+.++.++++++.+. ..++||++||...+.. ...
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------~~~ 149 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP------------LPG 149 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC------------CCC
Confidence 39999999996432 124455789999999999888543 2358999998754321 123
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+..|+.+|.+.+.+++ ..++++++++||.+.++.
T Consensus 150 ~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~ 190 (245)
T PRK12937 150 YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATEL 190 (245)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCch
Confidence 4678999999987764 248999999999998875
No 183
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.83 E-value=8.3e-20 Score=151.09 Aligned_cols=160 Identities=21% Similarity=0.224 Sum_probs=118.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh-hhhc---cccCCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
.++++||||+|+||++++++|+++|++|++++|+... .++. ......++.++.+|++| .+++.+++.. +
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD-TEECAEALAEIEEEEGP 80 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999998532 1111 11123468899999999 7766665532 4
Q ss_pred CcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHH----HHhcCCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEA----CRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 136 ~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
+|+||||+|.... .+++..+++|+.++.+++++ +++.+.++||++||...+... ..
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~------------~~ 148 (245)
T PRK12824 81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ------------FG 148 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC------------CC
Confidence 9999999986532 12445578999998887554 465667799999998654322 12
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
...|..+|.+.+.+++ +.++++++++||.+.++..
T Consensus 149 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~ 190 (245)
T PRK12824 149 QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMV 190 (245)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcch
Confidence 3568899998776653 3589999999999988753
No 184
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.83 E-value=5.2e-20 Score=151.60 Aligned_cols=155 Identities=17% Similarity=0.172 Sum_probs=117.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCCh-HHHHHHHcCCCcEEEEc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS-AKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~-~~~~~~~~~~~d~vi~~ 142 (252)
+++++++||||+|+||++++++|+++|++|++++|+.... ...++.++.+|+++ . +++.+.+.. +|+||||
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~-~~~~~~~~~~~-id~lv~~ 74 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------LSGNFHFLQLDLSD-DLEPLFDWVPS-VDILCNT 74 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------cCCcEEEEECChHH-HHHHHHHhhCC-CCEEEEC
Confidence 4679999999999999999999999999999999875432 12468899999998 5 445555555 9999999
Q ss_pred CCCCCC---------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHH
Q 025456 143 TGFQPG---------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI 209 (252)
Q Consensus 143 ag~~~~---------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~ 209 (252)
+|.... .++++.+++|+.++.++++++. +.+.++||++||...+... .....|+.
T Consensus 75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~Y~~ 142 (235)
T PRK06550 75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG------------GGGAAYTA 142 (235)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------------CCCcccHH
Confidence 986321 1234567899999999988874 3445689999997543211 12356888
Q ss_pred HHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 210 AKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 210 sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
+|.+.+.+.+ ..|+++++++||.+.++..
T Consensus 143 sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~ 178 (235)
T PRK06550 143 SKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMT 178 (235)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccc
Confidence 9998776654 2589999999999988753
No 185
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.83 E-value=5.8e-20 Score=158.37 Aligned_cols=164 Identities=23% Similarity=0.213 Sum_probs=120.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc---C--CCCeEEEEeeCCCC-h---HHHHHHHcC-
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---D--NPSLQIVKADVTEG-S---AKLSEAIGD- 134 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~---~--~~~~~~i~~Dl~d~-~---~~~~~~~~~- 134 (252)
.+++++||||||+||++++++|+++|++|++++|++++.++...+ . ..++..+.+|+++. . +.+.+.+++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 479999999999999999999999999999999998776543211 1 23577889999852 2 234444544
Q ss_pred CCcEEEEcCCCCCC----------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 135 DSEAVVCATGFQPG----------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 135 ~~d~vi~~ag~~~~----------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
++|++|||||+... .+++..+++|+.|+.++++++ ++.+.++||++||...+... .
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-~--------- 201 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP-S--------- 201 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC-C---------
Confidence 36699999997531 112346789999998888776 45566799999997543210 0
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
......|+.+|++.+.+.+ ..|++++++.||.+.++..
T Consensus 202 ~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~ 246 (320)
T PLN02780 202 DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMA 246 (320)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcc
Confidence 0124789999999887654 3589999999999999864
No 186
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.83 E-value=8.9e-20 Score=151.30 Aligned_cols=161 Identities=22% Similarity=0.213 Sum_probs=119.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecC-chhhhhc---cccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~-~~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
+++++++||||+|+||++++++|+++|++|+++.++ ++..+.. +.....++.++.+|++| .+++.+++..
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK-VEDANRLVEEAVNHF 82 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 457999999999999999999999999999876554 3333222 11123468899999999 6666665543
Q ss_pred -CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHh----cCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 -~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||||.... .++++.+++|+.++.++++++.. .+.++||++||...+...
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 150 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG------------ 150 (247)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC------------
Confidence 48999999987442 23445578999999999998853 345699999997543211
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..+..|+.+|.+.+.+.+ ..++++++++||.+.++.
T Consensus 151 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 193 (247)
T PRK12935 151 FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEM 193 (247)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChh
Confidence 124679999998876653 248999999999998764
No 187
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.83 E-value=6.9e-20 Score=153.34 Aligned_cols=163 Identities=15% Similarity=0.169 Sum_probs=118.5
Q ss_pred ccCCCcEEEEEcCC--ChHHHHHHHHHHHCCCeEEEeecCchhh---hhccccCCCCeEEEEeeCCCChHHHHHHHcC--
Q 025456 62 VSVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKA---KTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-- 134 (252)
Q Consensus 62 ~~~~~~~vlVtGat--G~iG~~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-- 134 (252)
.++++|+++||||+ ++||++++++|+++|++|++.+|+.+.. ++... ......++++|++| .+++.++++.
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~-~~~v~~~~~~~~ 83 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAE-ELDAPIFLPLDVRE-PGQLEAVFARIA 83 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHH-hhccceEEecCcCC-HHHHHHHHHHHH
Confidence 45678999999998 5999999999999999999999875432 22111 11235678999999 6666554421
Q ss_pred ----CCcEEEEcCCCCCC------------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCc
Q 025456 135 ----DSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNP 196 (252)
Q Consensus 135 ----~~d~vi~~ag~~~~------------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~ 196 (252)
++|++|||||.... .+++..+++|+.++.++++.+... .-+++|++||.....
T Consensus 84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~--------- 154 (258)
T PRK07533 84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK--------- 154 (258)
T ss_pred HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc---------
Confidence 49999999996431 134566899999999988876321 125899999864321
Q ss_pred chhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 197 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 197 ~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
+...+..|+.+|++.+.+.+ ..|+++++|.||.+.++..
T Consensus 155 ---~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~ 200 (258)
T PRK07533 155 ---VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAA 200 (258)
T ss_pred ---CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhh
Confidence 01235679999999887654 3689999999999988753
No 188
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.83 E-value=6.2e-20 Score=152.28 Aligned_cols=162 Identities=20% Similarity=0.207 Sum_probs=122.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHc------C
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG------D 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~------~ 134 (252)
+++++++||||+|+||++++++|+++|++|++++|++++..... .....++.++.+|++| .+++.+++. +
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 45799999999999999999999999999999999876554322 1123568999999999 777766553 1
Q ss_pred CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|+||||+|..... +++..+++|+.++.++++++. +.+.++||++||...+... .
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~ 151 (250)
T PRK12939 84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA------------P 151 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC------------C
Confidence 399999999975421 233456799999999988874 3345699999997543211 1
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.+..|..+|.+.+.+++ ..++++++++||.+.++..
T Consensus 152 ~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~ 194 (250)
T PRK12939 152 KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEAT 194 (250)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccc
Confidence 24678999999887664 2589999999999988753
No 189
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.83 E-value=5.1e-20 Score=153.42 Aligned_cols=158 Identities=17% Similarity=0.173 Sum_probs=117.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------CC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~ 136 (252)
+|+++||||+|+||++++++|+++|++|++++|+.+..+... .....++.++++|++| .+++.+++.. ++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCCc
Confidence 479999999999999999999999999999999876554322 1123578899999999 6666654431 38
Q ss_pred cEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 137 d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
|+||||+|.... .+|+..+++|+.++.++++++. +.+ .++||++||...+... ..
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~ 147 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG------------PG 147 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC------------CC
Confidence 999999985321 1245568999999999998883 222 3689999988533211 12
Q ss_pred hhHHHHHHHHHHHHHH--------HcCCcEEEEeCCcccCC
Q 025456 204 FGLTLIAKLQAEQYIR--------KSGINYTIIRPGGLRNE 236 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~--------~~gi~~~~lrPg~i~~~ 236 (252)
...|+.+|.+.+.+.+ ++|++++.|+||.+.+.
T Consensus 148 ~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 148 VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT 188 (252)
T ss_pred CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence 3468889988877654 25899999999999853
No 190
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.83 E-value=7.6e-20 Score=149.07 Aligned_cols=159 Identities=25% Similarity=0.274 Sum_probs=135.9
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc--cCCCCeEEEEeeCCCChHHHHHHHcCCCcEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
+.+|..+.|+|||||+|++++++|.+.|.+|++-.|..+.....++ ++..++-++..|+.| +++++++++. .++||
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~D-edSIr~vvk~-sNVVI 135 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRD-EDSIRAVVKH-SNVVI 135 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCC-HHHHHHHHHh-CcEEE
Confidence 4568999999999999999999999999999999997654332221 244678999999999 9999999998 99999
Q ss_pred EcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHH
Q 025456 141 CATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK 220 (252)
Q Consensus 141 ~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~ 220 (252)
|+.|...+.....+.++|+.+++.+.+.|++.|+.|||++|+.+.. ...-+.|..+|++.|..+++
T Consensus 136 NLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan--------------v~s~Sr~LrsK~~gE~aVrd 201 (391)
T KOG2865|consen 136 NLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN--------------VKSPSRMLRSKAAGEEAVRD 201 (391)
T ss_pred EeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc--------------ccChHHHHHhhhhhHHHHHh
Confidence 9999877777777889999999999999999999999999987421 12346678999999999998
Q ss_pred cCCcEEEEeCCcccCCC
Q 025456 221 SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 221 ~gi~~~~lrPg~i~~~~ 237 (252)
.-...+|+||..|+|..
T Consensus 202 afPeAtIirPa~iyG~e 218 (391)
T KOG2865|consen 202 AFPEATIIRPADIYGTE 218 (391)
T ss_pred hCCcceeechhhhcccc
Confidence 88899999999998864
No 191
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.83 E-value=8.1e-20 Score=154.02 Aligned_cols=160 Identities=18% Similarity=0.192 Sum_probs=116.2
Q ss_pred CCCcEEEEEcCCC--hHHHHHHHHHHHCCCeEEEeecCchhh---hhccccCCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 64 VKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLDKA---KTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG--~iG~~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
+++|+++||||++ +||++++++|+++|++|++.+|+.... ++..... ....++++|++| .+++.+++..
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-g~~~~~~~Dv~d-~~~v~~~~~~~~~~ 82 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL-GSDFVLPCDVED-IASVDAVFEALEKK 82 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc-CCceEEeCCCCC-HHHHHHHHHHHHHH
Confidence 5689999999997 999999999999999999988875322 1111111 123578999999 6666655432
Q ss_pred --CCcEEEEcCCCCCC------------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcch
Q 025456 135 --DSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAY 198 (252)
Q Consensus 135 --~~d~vi~~ag~~~~------------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~ 198 (252)
++|++|||||.... .+|+..+++|+.++.++++++... .-++||++||......
T Consensus 83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~---------- 152 (271)
T PRK06505 83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV---------- 152 (271)
T ss_pred hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc----------
Confidence 49999999996431 234566789999998888776321 1268999998743211
Q ss_pred hccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
...+..|..+|++.+.+.+ .+|++++.|.||.+.++.
T Consensus 153 --~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~ 196 (271)
T PRK06505 153 --MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLA 196 (271)
T ss_pred --CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccc
Confidence 1224679999999887664 368999999999998875
No 192
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.2e-19 Score=151.86 Aligned_cols=161 Identities=17% Similarity=0.289 Sum_probs=122.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc----cCCCCeEEEEeeCCCChHHHHHHHcC--CCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD--DSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~i~~Dl~d~~~~~~~~~~~--~~d 137 (252)
+++++++||||+|+||+++++.|+++|++|++++|++++.+.... ....++.++.+|++| .+++.+++.. ++|
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~g~id 83 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAEAGDID 83 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHhCCCC
Confidence 468999999999999999999999999999999998776543221 123468899999999 7777766542 499
Q ss_pred EEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 138 ~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
++|||+|.... .++...+++|+.+..++++++ ++.+.+++|++||..... +...+.
T Consensus 84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~------------~~~~~~ 151 (259)
T PRK06125 84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN------------PDADYI 151 (259)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC------------CCCCch
Confidence 99999997532 134456789999988887776 444446899999864311 112356
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.|..+|.+.+.+.+ ..|++++.|+||.+.++.
T Consensus 152 ~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 190 (259)
T PRK06125 152 CGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDR 190 (259)
T ss_pred HhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHH
Confidence 78899999877665 258999999999998873
No 193
>PRK05855 short chain dehydrogenase; Validated
Probab=99.83 E-value=6.9e-20 Score=169.44 Aligned_cols=164 Identities=18% Similarity=0.157 Sum_probs=125.8
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
..+.+++++||||+||||++++++|+++|++|++++|+.++.++.. .....++.++.+|++| .+++.+.++.
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~ 389 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAE 389 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 3456799999999999999999999999999999999876654322 1123468899999999 7666665542
Q ss_pred --CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcC-CCEEEEEccceeeccCCCCCCCcchh
Q 025456 135 --DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRG-VNRFILISSILVNGAAMGQILNPAYI 199 (252)
Q Consensus 135 --~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~ 199 (252)
++|+||||||+... .+++..+++|+.|+.++++++ ++.+ .++||++||...|...
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------- 459 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS---------- 459 (582)
T ss_pred cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC----------
Confidence 48999999997542 134456789999999888875 3444 3699999998766432
Q ss_pred ccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.....|+.+|++.+.+.+ +.|+++++|.||.+.++..
T Consensus 460 --~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 503 (582)
T PRK05855 460 --RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIV 503 (582)
T ss_pred --CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccch
Confidence 234679999998887654 3589999999999988753
No 194
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.83 E-value=9.2e-20 Score=153.05 Aligned_cols=159 Identities=21% Similarity=0.245 Sum_probs=119.4
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
.+++++++||||+|+||.+++++|+++|++|++++|+++...+.. .....++.++.+|++| .+++.+.+++
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEF 84 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 346899999999999999999999999999999999876654321 1123457889999999 7766665532
Q ss_pred -CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHh----cCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 -~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||+|.... .++.+.+++|+.++.++++++.. .+ ++||++||...+.. .
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~~------------~ 151 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVP------------M 151 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhccC------------C
Confidence 38999999985331 12334577999999999888743 33 69999999754311 1
Q ss_pred chhhHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccC
Q 025456 202 NVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRN 235 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~ 235 (252)
..+..|..+|.+.+.+.+. .|++++.++||.+.+
T Consensus 152 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~ 192 (264)
T PRK07576 152 PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAG 192 (264)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccC
Confidence 2346789999999887652 589999999999864
No 195
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.83 E-value=2.2e-19 Score=148.66 Aligned_cols=160 Identities=24% Similarity=0.240 Sum_probs=119.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEe-ecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHc------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG------ 133 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~------ 133 (252)
+++++++||||+|+||.+++++|+++|++|+++ .|+++...... .....++.++.+|++| .+++.+.+.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999998 88776543322 1123468899999999 777666554
Q ss_pred -CCCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 134 -DDSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 134 -~~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
+ +|+|||++|..... +++..+++|+.++.++++.+. +.+.+++|++||...+...
T Consensus 82 ~~-id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~----------- 149 (247)
T PRK05565 82 GK-IDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA----------- 149 (247)
T ss_pred CC-CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC-----------
Confidence 4 99999999875321 234557899999888887774 4456789999997543221
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.....|+.+|.+.+.+++ ..|+++++++||.+.++.
T Consensus 150 -~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~ 192 (247)
T PRK05565 150 -SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEM 192 (247)
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcc
Confidence 123568888887766543 358999999999997764
No 196
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.83 E-value=8.2e-20 Score=150.66 Aligned_cols=156 Identities=18% Similarity=0.135 Sum_probs=115.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCcEE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEAV 139 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d~v 139 (252)
+|+++||||+|+||++++++|+++|++|++++|+++...+.+.. .++.++.+|++| .+++.+.+.. ++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ--AGAQCIQADFST-NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH--cCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEE
Confidence 57999999999999999999999999999999987654332221 247889999999 6666554432 39999
Q ss_pred EEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcC--CCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 140 VCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG--VNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 140 i~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~--~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
|||||.... .+++..+++|+.++..+.+.+. +.+ .+++|++||...... ...+.
T Consensus 79 v~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~------------~~~~~ 146 (236)
T PRK06483 79 IHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG------------SDKHI 146 (236)
T ss_pred EECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC------------CCCCc
Confidence 999986422 1244567899999887766653 333 468999998743211 12246
Q ss_pred HHHHHHHHHHHHHHH------cCCcEEEEeCCcccCC
Q 025456 206 LTLIAKLQAEQYIRK------SGINYTIIRPGGLRNE 236 (252)
Q Consensus 206 ~y~~sK~~~e~~~~~------~gi~~~~lrPg~i~~~ 236 (252)
.|+.+|++.+.+.+. .++++++|+||.+.++
T Consensus 147 ~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~ 183 (236)
T PRK06483 147 AYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFN 183 (236)
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecC
Confidence 799999999987652 2699999999998664
No 197
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.7e-19 Score=150.78 Aligned_cols=160 Identities=16% Similarity=0.118 Sum_probs=116.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCc-hhhhhc---cccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~-~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
++|+++||||+|+||++++++|+++|++|+++.++. +..+.. +.....++.++.+|++| .+++.+++.+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAALG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999998877653 332221 11123568899999999 6666665532
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHh----cCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|+||||||.... .+++..+++|+.++.++++++.. .+.+++|+++|...+... .
T Consensus 87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~------------p 154 (258)
T PRK09134 87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN------------P 154 (258)
T ss_pred CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC------------C
Confidence 48999999986432 12345678999999999988753 234688888876433211 1
Q ss_pred hhhHHHHHHHHHHHHHHH------cCCcEEEEeCCcccCCC
Q 025456 203 VFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~~------~gi~~~~lrPg~i~~~~ 237 (252)
.+..|+.+|.+++.+.+. .++++++++||.+.+..
T Consensus 155 ~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~ 195 (258)
T PRK09134 155 DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSG 195 (258)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCc
Confidence 235799999988876652 24999999999987643
No 198
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.83 E-value=2.3e-19 Score=148.37 Aligned_cols=160 Identities=21% Similarity=0.277 Sum_probs=117.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh-hh---ccccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-KT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
+++++++||||+|+||++++++|+++|++|+++.|+.... .. .+.....++.++.+|++| .+++.+++..
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4578999999999999999999999999998888876532 11 122234578889999999 7766665541
Q ss_pred -CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHHh----cCCCEEEEEcccee-eccCCCCCCCcchhc
Q 025456 135 -DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILV-NGAAMGQILNPAYIF 200 (252)
Q Consensus 135 -~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v-~~~~~~~~~~~~~~~ 200 (252)
++|+|||++|..... +++..+++|+.++.++++++.. .+.++||++||... ++..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~----------- 150 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP----------- 150 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC-----------
Confidence 389999999864421 1234467899999999888854 45578999999743 2211
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
....|..+|.+.+.+++ ..++++++++||.+.++.
T Consensus 151 --~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~ 192 (248)
T PRK05557 151 --GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDM 192 (248)
T ss_pred --CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcc
Confidence 23568889988876553 358999999999987664
No 199
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.83 E-value=1.6e-19 Score=151.15 Aligned_cols=163 Identities=16% Similarity=0.154 Sum_probs=117.3
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh-hhh---ccccCCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
.+++++++||||+|+||++++++|+++|++|+++.|+... ... .+.....++.++.+|++| .+++.+.+..
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~ 82 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKE 82 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999988885432 221 121123567889999999 6666655431
Q ss_pred --CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHH----HHhcC-CCEEEEEccceeeccCCCCCCCcchh
Q 025456 135 --DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEA----CRKRG-VNRFILISSILVNGAAMGQILNPAYI 199 (252)
Q Consensus 135 --~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~----~~~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~ 199 (252)
++|++|||+|.... .+++..+++|+.++.++++. +++.+ .+++|++||...+.
T Consensus 83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~------------ 150 (261)
T PRK08936 83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI------------ 150 (261)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC------------
Confidence 48999999997432 12345578998887765544 45544 36899999974321
Q ss_pred ccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
+...+..|+.+|++.+.+.+ ..|+++++|+||.+.++..
T Consensus 151 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~ 196 (261)
T PRK08936 151 PWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPIN 196 (261)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcc
Confidence 11234678899988776553 3589999999999988863
No 200
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.82 E-value=4.5e-19 Score=148.07 Aligned_cols=161 Identities=17% Similarity=0.168 Sum_probs=118.7
Q ss_pred CCCcEEEEEcCCC--hHHHHHHHHHHHCCCeEEEeecCch-----------hh---hhccccCCCCeEEEEeeCCCChHH
Q 025456 64 VKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLD-----------KA---KTTLSKDNPSLQIVKADVTEGSAK 127 (252)
Q Consensus 64 ~~~~~vlVtGatG--~iG~~l~~~L~~~G~~V~~~~r~~~-----------~~---~~~~~~~~~~~~~i~~Dl~d~~~~ 127 (252)
+++++++||||+| +||.+++++|+++|++|++++|++. .. ...+.....+++++.+|++| .++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~ 81 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQ-PYA 81 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCC-HHH
Confidence 4679999999995 8999999999999999999998721 11 11111123468899999999 666
Q ss_pred HHHHHcC------CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHHh----cCCCEEEEEccceeeccC
Q 025456 128 LSEAIGD------DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAA 189 (252)
Q Consensus 128 ~~~~~~~------~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v~~~~ 189 (252)
+.+++.. ++|+||||||..... +++..+++|+.++.++++++.. .+.+++|++||...+...
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~ 161 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM 161 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence 6554431 489999999874321 2334578999999999988743 244699999997554321
Q ss_pred CCCCCCcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 190 MGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 190 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.....|..+|++.+.+++ ..+++++.++||.+.++.
T Consensus 162 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~ 204 (256)
T PRK12748 162 ------------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGW 204 (256)
T ss_pred ------------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCC
Confidence 124679999999998764 258999999999988764
No 201
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.7e-19 Score=169.54 Aligned_cols=164 Identities=21% Similarity=0.275 Sum_probs=126.8
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
.+++|+++||||+|+||++++++|+++|++|++++|+++..++... ....++.++.+|++| .+++.+++..
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD-SAAVDHTVKDILAEH 446 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 4678999999999999999999999999999999999876544321 123568899999999 7777666541
Q ss_pred -CCcEEEEcCCCCCC----------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchh
Q 025456 135 -DSEAVVCATGFQPG----------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYI 199 (252)
Q Consensus 135 -~~d~vi~~ag~~~~----------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~ 199 (252)
++|+||||||.... .+++..+++|+.|+.++++++ ++.+.++||++||..++...
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 516 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA---------- 516 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC----------
Confidence 49999999996421 123455789999988876665 55667899999998765432
Q ss_pred ccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCCC
Q 025456 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~~ 239 (252)
..+..|+.+|++.+.+.+ ..|+++++|+||.+.++...
T Consensus 517 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~ 561 (657)
T PRK07201 517 --PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIA 561 (657)
T ss_pred --CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccC
Confidence 124679999999987764 35899999999999998654
No 202
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.82 E-value=1.3e-19 Score=151.72 Aligned_cols=160 Identities=17% Similarity=0.189 Sum_probs=116.4
Q ss_pred CCCcEEEEEcCC--ChHHHHHHHHHHHCCCeEEEeecCchh------hhhccccCCCCeEEEEeeCCCChHHHHHHHcC-
Q 025456 64 VKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLDK------AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD- 134 (252)
Q Consensus 64 ~~~~~vlVtGat--G~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~- 134 (252)
+++|+++||||+ ++||++++++|+++|++|++..|+.+. .++... ....+.++++|++| .+++.++++.
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d-~~~v~~~~~~~ 81 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTE-PLNPSLFLPCDVQD-DAQIEETFETI 81 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHh-ccCcceEeecCcCC-HHHHHHHHHHH
Confidence 468999999986 899999999999999999887664321 111111 22346788999999 6666655432
Q ss_pred -----CCcEEEEcCCCCCC------------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCC
Q 025456 135 -----DSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILN 195 (252)
Q Consensus 135 -----~~d~vi~~ag~~~~------------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~ 195 (252)
++|++|||||+... .+|+..+++|+.++.++++++... .-++||++||.....
T Consensus 82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~-------- 153 (258)
T PRK07370 82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR-------- 153 (258)
T ss_pred HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc--------
Confidence 49999999996421 234567899999998888876321 126899999974321
Q ss_pred cchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 196 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 196 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+...+..|+.+|++.+.+.+ ..|+++++|.||.+.++.
T Consensus 154 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~ 198 (258)
T PRK07370 154 ----AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLA 198 (258)
T ss_pred ----CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCch
Confidence 11234679999999987765 358999999999998874
No 203
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.82 E-value=1.5e-19 Score=151.23 Aligned_cols=159 Identities=18% Similarity=0.218 Sum_probs=115.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHc------CCCcE
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIG------DDSEA 138 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~------~~~d~ 138 (252)
|+++||||+|+||++++++|+++|++|++++|+++..++.... ...++.++++|++| .+++.+++. +++|+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 4899999999999999999999999999999987665432211 12367889999999 776666553 14999
Q ss_pred EEEcCCCCCC----------CCCCCcceehHHHHHHHHHH----HH-hcCCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 139 VVCATGFQPG----------WDLFAPWKVDNFGTVNLVEA----CR-KRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 139 vi~~ag~~~~----------~~~~~~~~~n~~g~~~ll~~----~~-~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
||||||.... .++.+.+.+|+.++..+... +. +.+.++||++||..+... ...
T Consensus 80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~------------~~~ 147 (259)
T PRK08340 80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP------------MPP 147 (259)
T ss_pred EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC------------CCC
Confidence 9999996421 12223456787776655444 33 334579999999854321 112
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
+..|..+|++.+.+.+ +.|++++.|.||.+.+++.
T Consensus 148 ~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~ 189 (259)
T PRK08340 148 LVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGA 189 (259)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccH
Confidence 4678899998887765 2589999999999988753
No 204
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2.4e-19 Score=146.95 Aligned_cols=161 Identities=17% Similarity=0.243 Sum_probs=119.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC----CCcEEEE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----DSEAVVC 141 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~----~~d~vi~ 141 (252)
+++++||||+|+||++++++|+++|++|++++|+++..+... ...++.++.+|++| .+++++++.. ++|+|||
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~ 77 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ--ALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFV 77 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH--hccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEE
Confidence 478999999999999999999999999999999876554322 12367888999999 6666655542 4999999
Q ss_pred cCCCCCC----------CCCCCcceehHHHHHHHHHHHHhc---CCCEEEEEccceeeccCCCCCCCcchhccchhhHHH
Q 025456 142 ATGFQPG----------WDLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 208 (252)
Q Consensus 142 ~ag~~~~----------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~ 208 (252)
|+|.... .++...+.+|+.++.++++++... +.++++++||.... ... .+...+..|.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~--~~~-------~~~~~~~~Y~ 148 (225)
T PRK08177 78 NAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGS--VEL-------PDGGEMPLYK 148 (225)
T ss_pred cCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccc--ccc-------CCCCCccchH
Confidence 9987421 134456789999999998887532 33578888886321 100 0112345689
Q ss_pred HHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 209 IAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 209 ~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.+|.+.+.+++ ..+++++.++||.+.++..
T Consensus 149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~ 185 (225)
T PRK08177 149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMG 185 (225)
T ss_pred HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCC
Confidence 99999988765 2579999999999988864
No 205
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.82 E-value=5.8e-19 Score=147.34 Aligned_cols=159 Identities=22% Similarity=0.225 Sum_probs=119.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc-CCCCeEEEEeeCCCChHHHHHHHcC------CCcE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d~ 138 (252)
+++++||||+|+||++++++|+++|++|++++|+++..+..... ...+++++++|++| .+++.+.+.+ ++|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 57999999999999999999999999999999987765433221 22468899999999 7777665542 3899
Q ss_pred EEEcCCCCCCCC--------CCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccchhhH
Q 025456 139 VVCATGFQPGWD--------LFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (252)
Q Consensus 139 vi~~ag~~~~~~--------~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~ 206 (252)
|||++|...... +...+.+|+.++.++++++ ++.+.++||++||...+... ....
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------~~~~ 147 (257)
T PRK07074 81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-------------GHPA 147 (257)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-------------CCcc
Confidence 999998653211 2233568999998888887 34566789999996432110 1235
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 207 y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
|+.+|++.+.+++ .+|+++++++||.+.++..
T Consensus 148 y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~ 186 (257)
T PRK07074 148 YSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAW 186 (257)
T ss_pred cHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchh
Confidence 8889998887664 2489999999999988753
No 206
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.82 E-value=5.4e-19 Score=146.04 Aligned_cols=163 Identities=14% Similarity=0.217 Sum_probs=117.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc----cCCCCeEEEEeeCCCC-hHHHHH-------H
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEG-SAKLSE-------A 131 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~i~~Dl~d~-~~~~~~-------~ 131 (252)
+++++++||||+|+||++++++|+++|++|++++|+++..+.... .....+.++.+|+++. .+++.+ .
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 567999999999999999999999999999999999876543221 1223567889999752 223332 2
Q ss_pred HcCCCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcch
Q 025456 132 IGDDSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAY 198 (252)
Q Consensus 132 ~~~~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~ 198 (252)
+.+++|+||||||.... .++...+++|+.++.++++++. +.+.+++|++||.....
T Consensus 84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~----------- 152 (239)
T PRK08703 84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET----------- 152 (239)
T ss_pred hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc-----------
Confidence 31248999999996421 1223457899999888888773 34457999999864211
Q ss_pred hccchhhHHHHHHHHHHHHHHH-------c-CCcEEEEeCCcccCCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIRK-------S-GINYTIIRPGGLRNEPP 238 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~~-------~-gi~~~~lrPg~i~~~~~ 238 (252)
+...+..|+.+|++.+.+.+. . ++++++|+||++.++..
T Consensus 153 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~ 199 (239)
T PRK08703 153 -PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR 199 (239)
T ss_pred -CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc
Confidence 112346799999999877642 2 69999999999999864
No 207
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.8e-19 Score=153.08 Aligned_cols=160 Identities=16% Similarity=0.118 Sum_probs=116.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCc---------hhhhhc---cccCCCCeEEEEeeCCCChHHHHHH
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL---------DKAKTT---LSKDNPSLQIVKADVTEGSAKLSEA 131 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~---------~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~ 131 (252)
+++++++||||+++||++++++|+++|++|++++|+. +..+.. +.....++.++.+|++| .+++.+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHHH
Confidence 4589999999999999999999999999999988764 332221 11123467889999999 6666654
Q ss_pred Hc------CCCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcC------CCEEEEEccceeec
Q 025456 132 IG------DDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG------VNRFILISSILVNG 187 (252)
Q Consensus 132 ~~------~~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~------~~~~v~~SS~~v~~ 187 (252)
++ +++|++|||||+... .+++..+++|+.+++++++++. +.. .++||++||.....
T Consensus 83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 162 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ 162 (286)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence 43 249999999997532 2345668999999988887763 221 25899999975422
Q ss_pred cCCCCCCCcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 188 AAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.. ..+..|+.+|++.+.+.+ +.|++++.|.|| +.++.
T Consensus 163 ~~------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~ 206 (286)
T PRK07791 163 GS------------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM 206 (286)
T ss_pred CC------------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc
Confidence 11 124679999999887654 368999999999 65554
No 208
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2.3e-19 Score=146.74 Aligned_cols=160 Identities=20% Similarity=0.210 Sum_probs=120.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHH---cC-CCcEEEE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI---GD-DSEAVVC 141 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~---~~-~~d~vi~ 141 (252)
|++++||||+|+||++++++|+++|++|++++|+++..++... .+++++.+|++| .+++.+++ .+ ++|+|||
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA---LGAEALALDVAD-PASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh---ccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEE
Confidence 4789999999999999999999999999999998766544322 346789999999 77777653 22 4899999
Q ss_pred cCCCCCC----------CCCCCcceehHHHHHHHHHHHHh---cCCCEEEEEcccee-eccCCCCCCCcchhccchhhHH
Q 025456 142 ATGFQPG----------WDLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILV-NGAAMGQILNPAYIFLNVFGLT 207 (252)
Q Consensus 142 ~ag~~~~----------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~v~~SS~~v-~~~~~~~~~~~~~~~~~~~~~y 207 (252)
++|.... .+++..+++|+.++.++++++.. ...+++|++||... ++... ......|
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~~~~Y 146 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT----------GTTGWLY 146 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc----------CCCcccc
Confidence 9987521 12456689999999999998854 22357999988643 33211 0111358
Q ss_pred HHHHHHHHHHHHH-----cCCcEEEEeCCcccCCCCC
Q 025456 208 LIAKLQAEQYIRK-----SGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 208 ~~sK~~~e~~~~~-----~gi~~~~lrPg~i~~~~~~ 239 (252)
..+|.+.+.+++. .+++++.++||++.++...
T Consensus 147 ~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~ 183 (222)
T PRK06953 147 RASKAALNDALRAASLQARHATCIALHPGWVRTDMGG 183 (222)
T ss_pred HHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC
Confidence 9999999887753 3789999999999988643
No 209
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2e-19 Score=150.71 Aligned_cols=162 Identities=19% Similarity=0.141 Sum_probs=120.5
Q ss_pred CCCcEEEEEcCCC-hHHHHHHHHHHHCCCeEEEeecCchhhhhccc---c--CCCCeEEEEeeCCCChHHHHHHHc----
Q 025456 64 VKQKKIFVAGATG-SSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSEAIG---- 133 (252)
Q Consensus 64 ~~~~~vlVtGatG-~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~--~~~~~~~i~~Dl~d~~~~~~~~~~---- 133 (252)
+++++++||||+| +||+++++.|+++|++|++++|+.++.++... . ...++.++++|+++ .+++.+++.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~ 93 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAAVE 93 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHHHH
Confidence 4579999999997 89999999999999999999988765543221 1 12368889999999 666665553
Q ss_pred --CCCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEccceeeccCCCCCCCcch
Q 025456 134 --DDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAY 198 (252)
Q Consensus 134 --~~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v~~~~~~~~~~~~~ 198 (252)
+++|+||||+|.... .++...+++|+.++.++++++. +.+ .+++|++||...+..
T Consensus 94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~---------- 163 (262)
T PRK07831 94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA---------- 163 (262)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC----------
Confidence 148999999996432 1344567899999988888763 333 468999988643211
Q ss_pred hccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
......|+.+|++.+.+.+ .+|+++++|+||.+.++..
T Consensus 164 --~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~ 208 (262)
T PRK07831 164 --QHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFL 208 (262)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccc
Confidence 1234678999999988765 2589999999999998753
No 210
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.9e-19 Score=147.49 Aligned_cols=152 Identities=15% Similarity=0.123 Sum_probs=116.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC---CCcEEEEcC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---DSEAVVCAT 143 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~---~~d~vi~~a 143 (252)
|+++||||+|+||++++++|+++|++|++++|+.++.+..... .+++++++|++| .+++.+++.. ++|++|||+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~--~~~~~~~~D~~~-~~~v~~~~~~~~~~id~lv~~a 77 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE--LDVDAIVCDNTD-PASLEEARGLFPHHLDTIVNVP 77 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--ccCcEEecCCCC-HHHHHHHHHHHhhcCcEEEECC
Confidence 3699999999999999999999999999999987766543221 246788999999 7777766642 389999998
Q ss_pred CCCC-------------CCCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhccchhhHHH
Q 025456 144 GFQP-------------GWDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 208 (252)
Q Consensus 144 g~~~-------------~~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~ 208 (252)
|... ..+++..+++|+.++.++++++... ..++||++||.. . .....|.
T Consensus 78 g~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~------------~~~~~Y~ 141 (223)
T PRK05884 78 APSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----P------------PAGSAEA 141 (223)
T ss_pred CccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----C------------CCccccH
Confidence 7421 1234566799999999999987431 226899999863 0 0135689
Q ss_pred HHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 209 IAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 209 ~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.+|++.+.+.+ ..|++++.|.||.+.++.
T Consensus 142 asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~ 177 (223)
T PRK05884 142 AIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG 177 (223)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh
Confidence 99998887654 368999999999998764
No 211
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2.6e-19 Score=153.39 Aligned_cols=165 Identities=17% Similarity=0.104 Sum_probs=116.4
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCch----------hhh---hccccCCCCeEEEEeeCCCChHHHH
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD----------KAK---TTLSKDNPSLQIVKADVTEGSAKLS 129 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~----------~~~---~~~~~~~~~~~~i~~Dl~d~~~~~~ 129 (252)
++++|+++||||+++||++++++|+++|++|++++|+.. ..+ +.+.....++.++++|++| .++++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~ 83 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLV-PEQVR 83 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCC-HHHHH
Confidence 356899999999999999999999999999999999742 221 1122123457789999999 66666
Q ss_pred HHHcC------CCcEEEEcC-CCCC-----C-------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceee
Q 025456 130 EAIGD------DSEAVVCAT-GFQP-----G-------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVN 186 (252)
Q Consensus 130 ~~~~~------~~d~vi~~a-g~~~-----~-------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~ 186 (252)
+++.. ++|++|||| |... . .++.+.+++|+.+++.+++++ ++.+-++||++||....
T Consensus 84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~ 163 (305)
T PRK08303 84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAE 163 (305)
T ss_pred HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccc
Confidence 55431 499999999 7421 0 123345688999988877766 33434699999986431
Q ss_pred ccCCCCCCCcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 187 GAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
-... +......|..+|++...+.+ ..|+++++|.||.+.++.
T Consensus 164 ~~~~---------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~ 212 (305)
T PRK08303 164 YNAT---------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM 212 (305)
T ss_pred ccCc---------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH
Confidence 1000 01123569999999887764 358999999999998875
No 212
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.82 E-value=2.2e-19 Score=150.18 Aligned_cols=161 Identities=14% Similarity=0.178 Sum_probs=116.4
Q ss_pred CCCcEEEEEcCC--ChHHHHHHHHHHHCCCeEEEeecCc---hhhhhccccC-CCCeEEEEeeCCCChHHHHHHHc----
Q 025456 64 VKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDL---DKAKTTLSKD-NPSLQIVKADVTEGSAKLSEAIG---- 133 (252)
Q Consensus 64 ~~~~~vlVtGat--G~iG~~l~~~L~~~G~~V~~~~r~~---~~~~~~~~~~-~~~~~~i~~Dl~d~~~~~~~~~~---- 133 (252)
+++|+++||||+ ++||++++++|+++|++|++++|+. +..++..... ..++.++++|++| .+++.++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 468999999997 8999999999999999999987753 2222222211 3467889999999 666665543
Q ss_pred --CCCcEEEEcCCCCCC----C--------CCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcc
Q 025456 134 --DDSEAVVCATGFQPG----W--------DLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPA 197 (252)
Q Consensus 134 --~~~d~vi~~ag~~~~----~--------~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~ 197 (252)
+++|++|||||+... . ++...+++|+.+..++++++... ..++||++||....-
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~---------- 153 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER---------- 153 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc----------
Confidence 259999999986431 0 12345688999988877776431 126899999974321
Q ss_pred hhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+...+..|+.+|++.+.+.+ ..|++++.|.||.+.++.
T Consensus 154 --~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 198 (257)
T PRK08594 154 --VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLS 198 (257)
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHh
Confidence 11224679999999987764 358999999999998864
No 213
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.82 E-value=3.8e-19 Score=145.48 Aligned_cols=157 Identities=17% Similarity=0.241 Sum_probs=116.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC--CCcEEEEc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVCA 142 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--~~d~vi~~ 142 (252)
++|+++||||+|+||+++++.|+++ ++|++++|+.+..++... ...+++++++|++| .+++.+++.. ++|+|||+
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAA-ELPGATPFPVDLTD-PEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHH-HhccceEEecCCCC-HHHHHHHHHhcCCCCEEEEC
Confidence 3689999999999999999999999 999999998766543322 12358899999999 8888887763 49999999
Q ss_pred CCCCCCC--------CCCCcceehHHHHHH----HHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHH
Q 025456 143 TGFQPGW--------DLFAPWKVDNFGTVN----LVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA 210 (252)
Q Consensus 143 ag~~~~~--------~~~~~~~~n~~g~~~----ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~s 210 (252)
+|..... ++...+++|+.+..+ +++.+++.+ +++|++||...++.. .....|+.+
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~------------~~~~~y~~~ 145 (227)
T PRK08219 79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRAN------------PGWGSYAAS 145 (227)
T ss_pred CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcC------------CCCchHHHH
Confidence 9875422 123346788888544 444445544 689999998654322 124578899
Q ss_pred HHHHHHHHHH-----cC-CcEEEEeCCcccCCC
Q 025456 211 KLQAEQYIRK-----SG-INYTIIRPGGLRNEP 237 (252)
Q Consensus 211 K~~~e~~~~~-----~g-i~~~~lrPg~i~~~~ 237 (252)
|.+.+.+++. .+ ++++.++||.+.++.
T Consensus 146 K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~ 178 (227)
T PRK08219 146 KFALRALADALREEEPGNVRVTSVHPGRTDTDM 178 (227)
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEecCCccchH
Confidence 9988876542 24 999999999887764
No 214
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2.4e-19 Score=148.69 Aligned_cols=160 Identities=19% Similarity=0.225 Sum_probs=115.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecC-chhhhhc---cccCCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~-~~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
+++++||||+|+||.+++++|+++|++|++..++ ++..... +.....++.++.+|++| .+++.+++.. +
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVAD-EADVLRLFEAVDRELGR 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCC-HHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999998877644 3332221 22123467889999999 7766665541 4
Q ss_pred CcEEEEcCCCCCCC---------CCCCcceehHHHHHHHHHHHHhc----C---CCEEEEEcccee-eccCCCCCCCcch
Q 025456 136 SEAVVCATGFQPGW---------DLFAPWKVDNFGTVNLVEACRKR----G---VNRFILISSILV-NGAAMGQILNPAY 198 (252)
Q Consensus 136 ~d~vi~~ag~~~~~---------~~~~~~~~n~~g~~~ll~~~~~~----~---~~~~v~~SS~~v-~~~~~~~~~~~~~ 198 (252)
+|+||||+|..... ++...+++|+.++.++++++.+. . -+++|++||... ++..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------- 151 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP--------- 151 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC---------
Confidence 89999999875321 23355889999999988887432 1 247999999754 2211
Q ss_pred hccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..+..|+.+|++.+.+++ +.|+++++++||+++|+..
T Consensus 152 ---~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~ 195 (248)
T PRK06123 152 ---GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIH 195 (248)
T ss_pred ---CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchh
Confidence 112359999999987654 2489999999999999853
No 215
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.82 E-value=3.6e-19 Score=151.03 Aligned_cols=158 Identities=18% Similarity=0.104 Sum_probs=108.8
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCCCCCC
Q 025456 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPG 148 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~ 148 (252)
|+||||+||||++++++|+++|++|++++|++........ .. ..|+.. ..+.+.+.+ +|+|||+||....
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~--~~~~~~--~~~~~~~~~-~D~Vvh~a~~~~~ 70 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----EG--YKPWAP--LAESEALEG-ADAVINLAGEPIA 70 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----ee--eecccc--cchhhhcCC-CCEEEECCCCCcc
Confidence 6899999999999999999999999999998765432110 11 112222 334556677 9999999986432
Q ss_pred -CCC-----CCcceehHHHHHHHHHHHHhcCCC--EEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHH--
Q 025456 149 -WDL-----FAPWKVDNFGTVNLVEACRKRGVN--RFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI-- 218 (252)
Q Consensus 149 -~~~-----~~~~~~n~~g~~~ll~~~~~~~~~--~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~-- 218 (252)
.++ ...+++|+.++.+++++|++.+++ +||++|+..+|+...+.+..+... ..+...|...+...|+.+
T Consensus 71 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~-~~~~~~~~~~~~~~e~~~~~ 149 (292)
T TIGR01777 71 DKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDS-PAGDDFLAELCRDWEEAAQA 149 (292)
T ss_pred cccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccC-CCCCChHHHHHHHHHHHhhh
Confidence 112 345688999999999999999863 566677777888654444444331 122233444444445443
Q ss_pred -HHcCCcEEEEeCCcccCCC
Q 025456 219 -RKSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 219 -~~~gi~~~~lrPg~i~~~~ 237 (252)
++.+++++++||+.++|+.
T Consensus 150 ~~~~~~~~~ilR~~~v~G~~ 169 (292)
T TIGR01777 150 AEDLGTRVVLLRTGIVLGPK 169 (292)
T ss_pred chhcCCceEEEeeeeEECCC
Confidence 3468999999999999985
No 216
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.81 E-value=1.8e-19 Score=149.83 Aligned_cols=159 Identities=16% Similarity=0.194 Sum_probs=115.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCc-hhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC--------CC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--------DS 136 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--------~~ 136 (252)
||+++||||+|+||++++++|+++|++|++++|++ +...........+++++.+|++| .+++.+.++. ..
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQD-VHELETNFNEILSSIQEDNV 79 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCC-HHHHHHHHHHHHHhcCcccC
Confidence 47999999999999999999999999999999987 33333222234578899999999 7777665542 01
Q ss_pred --cEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHH----Hhc-CCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 137 --EAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKR-GVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 137 --d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~----~~~-~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
+++|||+|.... .++...+++|+.++.++++.+ ++. +.++||++||..++. +
T Consensus 80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~ 147 (251)
T PRK06924 80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN------------P 147 (251)
T ss_pred CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC------------C
Confidence 278999986431 123355788998876666555 333 346899999975421 1
Q ss_pred cchhhHHHHHHHHHHHHHH---------HcCCcEEEEeCCcccCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~---------~~gi~~~~lrPg~i~~~~ 237 (252)
......|+.+|++.+.+.+ ..+++++.|+||.+.++.
T Consensus 148 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~ 193 (251)
T PRK06924 148 YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM 193 (251)
T ss_pred CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHh
Confidence 2345789999999988764 247999999999998764
No 217
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.81 E-value=3.7e-19 Score=147.34 Aligned_cols=161 Identities=16% Similarity=0.179 Sum_probs=115.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEe-ecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
|++++||||+|+||++++++|+++|++|+++ .|+++...+.. .....++.++++|++| .+++.+++.. +
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD-ENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC-HHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999874 46554433221 1123468889999999 7767665542 4
Q ss_pred CcEEEEcCCCCCCC---------CCCCcceehHHHHHHHHHHHHhc-------CCCEEEEEccceeeccCCCCCCCcchh
Q 025456 136 SEAVVCATGFQPGW---------DLFAPWKVDNFGTVNLVEACRKR-------GVNRFILISSILVNGAAMGQILNPAYI 199 (252)
Q Consensus 136 ~d~vi~~ag~~~~~---------~~~~~~~~n~~g~~~ll~~~~~~-------~~~~~v~~SS~~v~~~~~~~~~~~~~~ 199 (252)
+|+||||+|..... ++...+++|+.++.++++++... ..++||++||...+....
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~--------- 150 (247)
T PRK09730 80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP--------- 150 (247)
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC---------
Confidence 89999999964321 12356789999998887776321 135799999975432111
Q ss_pred ccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..+..|+.+|.+.+.+++ +.++++++++||.++++..
T Consensus 151 --~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~ 194 (247)
T PRK09730 151 --GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMH 194 (247)
T ss_pred --CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccc
Confidence 112358899998887654 3589999999999999853
No 218
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=2.9e-19 Score=149.31 Aligned_cols=161 Identities=19% Similarity=0.164 Sum_probs=116.0
Q ss_pred CCCcEEEEEcCCC--hHHHHHHHHHHHCCCeEEEeecCc-----------hhhh---hccccCCCCeEEEEeeCCCChHH
Q 025456 64 VKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDL-----------DKAK---TTLSKDNPSLQIVKADVTEGSAK 127 (252)
Q Consensus 64 ~~~~~vlVtGatG--~iG~~l~~~L~~~G~~V~~~~r~~-----------~~~~---~~~~~~~~~~~~i~~Dl~d~~~~ 127 (252)
+++|+++||||+| +||.+++++|+++|++|+++.|.. +... +.+.....++.++++|++| .++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~-~~~ 82 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQ-NDA 82 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHH
Confidence 5689999999995 899999999999999998875321 1111 1111123568889999999 666
Q ss_pred HHHHHcC------CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccC
Q 025456 128 LSEAIGD------DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAA 189 (252)
Q Consensus 128 ~~~~~~~------~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~ 189 (252)
+.+++.. ++|+||||||.... .+++..+++|+.++..+.+++ ++.+.++||++||.....
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-- 160 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG-- 160 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC--
Confidence 6655532 48999999986432 124455789999988775444 444456999999975321
Q ss_pred CCCCCCcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 190 MGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 190 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+...+..|+.+|++.+.+.+ .+|++++.|+||.+.++.
T Consensus 161 ----------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~ 205 (256)
T PRK12859 161 ----------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGW 205 (256)
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCC
Confidence 11235789999999987654 368999999999998864
No 219
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.81 E-value=2.3e-19 Score=151.32 Aligned_cols=160 Identities=14% Similarity=0.169 Sum_probs=117.0
Q ss_pred CCCcEEEEEcCC--ChHHHHHHHHHHHCCCeEEEeecCch---hhhhccccCCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 64 VKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 64 ~~~~~vlVtGat--G~iG~~l~~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
+++|+++||||+ ++||++++++|+++|++|++..|+.. ..++... .......+++|++| .+++++++..
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~-~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAA-ELGAFVAGHCDVTD-EASIDAVFETLEKK 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHH-hcCCceEEecCCCC-HHHHHHHHHHHHHh
Confidence 467999999997 89999999999999999998887632 2222211 11235678999999 6666655432
Q ss_pred --CCcEEEEcCCCCCC------------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcch
Q 025456 135 --DSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAY 198 (252)
Q Consensus 135 --~~d~vi~~ag~~~~------------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~ 198 (252)
++|++|||||+... .+++..+++|+.++.++++.+... +-+++|++||.....
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~----------- 154 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK----------- 154 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc-----------
Confidence 49999999996431 135566899999999999887532 226899999864321
Q ss_pred hccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+...+..|+.+|++.+.+.+ ..|+++++|.||.+.++.
T Consensus 155 -~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~ 199 (272)
T PRK08159 155 -VMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLA 199 (272)
T ss_pred -CCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHH
Confidence 11234679999999887664 358999999999998864
No 220
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.81 E-value=2.6e-19 Score=148.68 Aligned_cols=161 Identities=19% Similarity=0.243 Sum_probs=117.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---c-CCCCeEEEEeeCCC-ChHHHHH-------H
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K-DNPSLQIVKADVTE-GSAKLSE-------A 131 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~-~~~~~~~i~~Dl~d-~~~~~~~-------~ 131 (252)
+++++++||||+|+||.+++++|+++|++|++++|+.+..+.... . ...++.++.+|+++ ..+++.+ .
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999765443221 1 22467788888863 1333333 3
Q ss_pred HcCCCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcch
Q 025456 132 IGDDSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAY 198 (252)
Q Consensus 132 ~~~~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~ 198 (252)
+.. +|+||||||.... .+++..+++|+.++.++++++ ++.+.++||++||......
T Consensus 90 ~~~-id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~---------- 158 (247)
T PRK08945 90 FGR-LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG---------- 158 (247)
T ss_pred hCC-CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC----------
Confidence 334 9999999986421 123456789999988888876 4566789999999753211
Q ss_pred hccchhhHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~~~ 237 (252)
...+..|+.+|.+++.+++. .++++++++||.+.++.
T Consensus 159 --~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~ 202 (247)
T PRK08945 159 --RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAM 202 (247)
T ss_pred --CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcc
Confidence 11235689999998877642 47999999999997764
No 221
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.81 E-value=3.4e-19 Score=149.53 Aligned_cols=160 Identities=19% Similarity=0.307 Sum_probs=115.8
Q ss_pred CCCcEEEEEcCCC--hHHHHHHHHHHHCCCeEEEeecCch---hhhhccccCCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 64 VKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG--~iG~~l~~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
+++|+++||||++ +||++++++|+++|++|++.+|+.. ..++... ....+.++.+|++| .+++++++..
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 81 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAA-QLGSDIVLPCDVAE-DASIDAMFAELGKV 81 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHh-ccCCceEeecCCCC-HHHHHHHHHHHHhh
Confidence 4689999999985 9999999999999999998888731 1122111 22346788999999 7777665532
Q ss_pred --CCcEEEEcCCCCCCC-------------CCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcc
Q 025456 135 --DSEAVVCATGFQPGW-------------DLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPA 197 (252)
Q Consensus 135 --~~d~vi~~ag~~~~~-------------~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~ 197 (252)
++|++|||||+.... +++..+++|+.+...+.+++... +-++||++||.+...
T Consensus 82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~---------- 151 (262)
T PRK07984 82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER---------- 151 (262)
T ss_pred cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC----------
Confidence 499999999964321 22345688999988888876321 226899999874321
Q ss_pred hhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+...+..|+.+|.+.+.+.+ ..|+++++|.||.+.++.
T Consensus 152 --~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~ 196 (262)
T PRK07984 152 --AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 196 (262)
T ss_pred --CCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchH
Confidence 11124679999999987765 358999999999998864
No 222
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.81 E-value=3.8e-19 Score=150.21 Aligned_cols=170 Identities=18% Similarity=0.156 Sum_probs=119.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHc-----CCCc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG-----DDSE 137 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~-----~~~d 137 (252)
+|+++|||| |+||++++++|+ +|++|++++|+.++.++.. .....++.++++|++| .+++.+++. +++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 578999998 799999999996 8999999999876554322 1123468889999999 666665553 2499
Q ss_pred EEEEcCCCCC-CCCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCC-C----CC--C-Ccc----hh---
Q 025456 138 AVVCATGFQP-GWDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAM-G----QI--L-NPA----YI--- 199 (252)
Q Consensus 138 ~vi~~ag~~~-~~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~-~----~~--~-~~~----~~--- 199 (252)
+||||||+.. ..+++..+++|+.++.++++++... .-+++|++||........ . .. . ... ..
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQ 158 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccc
Confidence 9999999754 3467788999999999999988532 114677787765432110 0 00 0 000 00
Q ss_pred c---cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 200 F---LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 200 ~---~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
+ ...+..|..+|++.+.+.+ +.|+++++|.||.+.++..
T Consensus 159 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~ 207 (275)
T PRK06940 159 PDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLA 207 (275)
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccc
Confidence 0 0235679999999887654 3589999999999998853
No 223
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.81 E-value=1.6e-19 Score=139.54 Aligned_cols=162 Identities=19% Similarity=0.193 Sum_probs=120.0
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
..+.+.++||||+++||++|+..|++.|++|.+.+++....++.... ...+...+.+|+++ +++++..+++
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~-a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSK-AHDVQNTLEEMEKSLG 89 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCc-HHHHHHHHHHHHHhcC
Confidence 34579999999999999999999999999999999887665543322 22356678999999 6655554432
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHhc------CCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR------GVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~------~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
.+++++||||+..+ .+|++.+.+|+.|++.+.+++.+. +..+||++||+-..-...+
T Consensus 90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G--------- 160 (256)
T KOG1200|consen 90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG--------- 160 (256)
T ss_pred CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc---------
Confidence 49999999998763 478899999999999998887432 1238999999843211112
Q ss_pred cchhhHHHHHH--------HHHHHHHHHcCCcEEEEeCCcccCCCC
Q 025456 201 LNVFGLTLIAK--------LQAEQYIRKSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 201 ~~~~~~y~~sK--------~~~e~~~~~~gi~~~~lrPg~i~~~~~ 238 (252)
..+|+++| .++.++.+ .+|+++.+-||+|.+|+.
T Consensus 161 ---QtnYAAsK~GvIgftktaArEla~-knIrvN~VlPGFI~tpMT 202 (256)
T KOG1200|consen 161 ---QTNYAASKGGVIGFTKTAARELAR-KNIRVNVVLPGFIATPMT 202 (256)
T ss_pred ---chhhhhhcCceeeeeHHHHHHHhh-cCceEeEeccccccChhh
Confidence 24455544 45555444 589999999999999874
No 224
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.81 E-value=2.8e-19 Score=146.77 Aligned_cols=155 Identities=16% Similarity=0.201 Sum_probs=121.0
Q ss_pred EEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcC--CCcEEEEcCCC
Q 025456 70 FVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVCATGF 145 (252)
Q Consensus 70 lVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~--~~d~vi~~ag~ 145 (252)
+||||+|+||++++++|+++|++|++++|+++..+..... ...+++++.+|++| .+++.+++.. ++|++||++|.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~id~li~~ag~ 79 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITD-EAAVDAFFAEAGPFDHVVITAAD 79 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHhcCCCCEEEECCCC
Confidence 5999999999999999999999999999987665432211 13568899999999 7888877754 48999999986
Q ss_pred CCC--------CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHH
Q 025456 146 QPG--------WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY 217 (252)
Q Consensus 146 ~~~--------~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~ 217 (252)
... .+++..+++|+.++.+++++.+..+.++||++||...+... .+...|+.+|++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~------------~~~~~Y~~sK~a~~~~ 147 (230)
T PRK07041 80 TPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS------------ASGVLQGAINAALEAL 147 (230)
T ss_pred CCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC------------CcchHHHHHHHHHHHH
Confidence 432 12445678999999999996665566799999998665321 2346799999999887
Q ss_pred HHH-----cCCcEEEEeCCcccCCC
Q 025456 218 IRK-----SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 218 ~~~-----~gi~~~~lrPg~i~~~~ 237 (252)
.+. .++++++++||.+.++.
T Consensus 148 ~~~la~e~~~irv~~i~pg~~~t~~ 172 (230)
T PRK07041 148 ARGLALELAPVRVNTVSPGLVDTPL 172 (230)
T ss_pred HHHHHHHhhCceEEEEeecccccHH
Confidence 753 36899999999987764
No 225
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.81 E-value=2.3e-19 Score=149.94 Aligned_cols=159 Identities=18% Similarity=0.237 Sum_probs=114.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCch----hhhhc---cccCCCCeEEEEeeCCCChHHHHHHHcC--
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD----KAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD-- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~----~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-- 134 (252)
+++++++||||+|+||.++++.|+++|++|+++.++.. ..++. +.....++.++++|++| .+++.+++..
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~ 84 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTT-AAAVEKLFDDAK 84 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCC-HHHHHHHHHHHH
Confidence 45799999999999999999999999999777765432 11111 11123468889999999 7777665542
Q ss_pred ----CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEE-ccc-eeeccCCCCCCCcch
Q 025456 135 ----DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILI-SSI-LVNGAAMGQILNPAY 198 (252)
Q Consensus 135 ----~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~-SS~-~v~~~~~~~~~~~~~ 198 (252)
++|+||||||.... .+++..+++|+.++..+++++... ..++++++ ||. +.+.
T Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~----------- 153 (257)
T PRK12744 85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT----------- 153 (257)
T ss_pred HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-----------
Confidence 49999999996321 134456789999999999988542 12467665 443 2111
Q ss_pred hccchhhHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~~~ 237 (252)
..+..|+.+|++.|.+.+. .|+++++++||.+.++.
T Consensus 154 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~ 196 (257)
T PRK12744 154 ---PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPF 196 (257)
T ss_pred ---CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence 1246789999999987652 47999999999998864
No 226
>PRK08017 oxidoreductase; Provisional
Probab=99.81 E-value=5.8e-19 Score=147.13 Aligned_cols=156 Identities=22% Similarity=0.299 Sum_probs=116.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc-------CCCcE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-------DDSEA 138 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~-------~~~d~ 138 (252)
+++++||||+|+||.++++.|+++|++|++++|+.++.+.... .+++.+.+|++| .+++.+.+. +++|.
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ 77 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS---LGFTGILLDLDD-PESVERAADEVIALTDNRLYG 77 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh---CCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeE
Confidence 3689999999999999999999999999999998876544322 357889999999 665544332 23899
Q ss_pred EEEcCCCCCCC--------CCCCcceehHHHHHHH----HHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhH
Q 025456 139 VVCATGFQPGW--------DLFAPWKVDNFGTVNL----VEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (252)
Q Consensus 139 vi~~ag~~~~~--------~~~~~~~~n~~g~~~l----l~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~ 206 (252)
+||++|..... +++..+++|+.|+.++ ++.+++.+.+++|++||...+.. ......
T Consensus 78 ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------~~~~~~ 145 (256)
T PRK08017 78 LFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS------------TPGRGA 145 (256)
T ss_pred EEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC------------CCCccH
Confidence 99999864321 2335678999887775 56667777789999999743211 122467
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 207 y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
|+.+|.+.|.+.+ ..++++++++||.+.++.
T Consensus 146 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 183 (256)
T PRK08017 146 YAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRF 183 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccch
Confidence 9999999987643 468999999999887753
No 227
>PRK06484 short chain dehydrogenase; Validated
Probab=99.81 E-value=2.9e-19 Score=163.71 Aligned_cols=161 Identities=17% Similarity=0.217 Sum_probs=122.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCcE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d~ 138 (252)
++|+++||||+++||.+++++|+++|++|++++|+.+..++.......++.++++|++| .+++.+++.. ++|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCCE
Confidence 57999999999999999999999999999999998877655443233567889999999 6666555432 4999
Q ss_pred EEEcCCCCC----------CCCCCCcceehHHHHHHHHHHHH----hcCCC-EEEEEccceeeccCCCCCCCcchhccch
Q 025456 139 VVCATGFQP----------GWDLFAPWKVDNFGTVNLVEACR----KRGVN-RFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 139 vi~~ag~~~----------~~~~~~~~~~n~~g~~~ll~~~~----~~~~~-~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
||||||+.. ..+++..+++|+.++.++++++. +.+.+ +||++||....... ..
T Consensus 83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~------------~~ 150 (520)
T PRK06484 83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL------------PK 150 (520)
T ss_pred EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC------------CC
Confidence 999998731 12345668999999999888874 33333 89999997543211 12
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
...|..+|++.+.+.+ ..+++++.|.||.+.++..
T Consensus 151 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~ 192 (520)
T PRK06484 151 RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMV 192 (520)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhh
Confidence 4679999999987654 3589999999999988753
No 228
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.81 E-value=6.5e-19 Score=151.56 Aligned_cols=173 Identities=18% Similarity=0.211 Sum_probs=119.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHc------C
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG------D 134 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~------~ 134 (252)
++++++||||+++||.+++++|+++| ++|++++|+.++.++... .....+.++.+|++| .+++.+++. +
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR 80 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999 999999998766543221 123467889999999 666655442 1
Q ss_pred CCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHH----HhcC--CCEEEEEccceeeccCCC----CCCC
Q 025456 135 DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRG--VNRFILISSILVNGAAMG----QILN 195 (252)
Q Consensus 135 ~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~----~~~~--~~~~v~~SS~~v~~~~~~----~~~~ 195 (252)
++|++|||||+... .+++..+++|+.++.++++.+ ++.+ .++||++||...+..... .+.+
T Consensus 81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~ 160 (314)
T TIGR01289 81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN 160 (314)
T ss_pred CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence 49999999996421 123455789999988886665 3442 369999999876532110 0000
Q ss_pred -----------------cchhccchhhHHHHHHHHHHHHH----HH----cCCcEEEEeCCcc-cCCCC
Q 025456 196 -----------------PAYIFLNVFGLTLIAKLQAEQYI----RK----SGINYTIIRPGGL-RNEPP 238 (252)
Q Consensus 196 -----------------~~~~~~~~~~~y~~sK~~~e~~~----~~----~gi~~~~lrPg~i-~~~~~ 238 (252)
....+..++..|..||++...+. ++ .|+++++++||.+ .++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~ 229 (314)
T TIGR01289 161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLF 229 (314)
T ss_pred ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccc
Confidence 00012345677999999865433 22 4799999999998 46553
No 229
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=4e-19 Score=152.38 Aligned_cols=161 Identities=18% Similarity=0.103 Sum_probs=117.1
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCch-hhhh---ccccCCCCeEEEEeeCCCChHHHHHHHc----
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIG---- 133 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-~~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~---- 133 (252)
.++++++++||||+|+||++++++|+++|++|++.++... ..++ .+.....++.++.+|++| .+++.++++
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~ 86 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVG 86 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999887532 2222 122124568899999999 666655443
Q ss_pred -CCCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHh----c-------CCCEEEEEccceeeccCCCCC
Q 025456 134 -DDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----R-------GVNRFILISSILVNGAAMGQI 193 (252)
Q Consensus 134 -~~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~----~-------~~~~~v~~SS~~v~~~~~~~~ 193 (252)
+++|+||||||.... .+++..+++|+.++.++++++.. . ..++||++||...+...
T Consensus 87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 162 (306)
T PRK07792 87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP---- 162 (306)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC----
Confidence 249999999997542 23455678999999999887631 1 12589999997543211
Q ss_pred CCcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCC
Q 025456 194 LNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNE 236 (252)
Q Consensus 194 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~ 236 (252)
.....|+.+|++.+.+.+ ++|+++++|.||. .++
T Consensus 163 --------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~ 203 (306)
T PRK07792 163 --------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA 203 (306)
T ss_pred --------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc
Confidence 123579999999887654 3689999999984 444
No 230
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=7.2e-19 Score=146.06 Aligned_cols=161 Identities=18% Similarity=0.178 Sum_probs=118.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++++++||||+|+||+++++.|+++|++|++++|+.++.+... .....++.++++|++| .+++.+.+..
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 45799999999999999999999999999999999876554322 1124568889999999 6665544432
Q ss_pred CCcEEEEcCCCCCCC-----------------CCCCcceehHHHHHHHHHHH----Hhc-CCCEEEEEccceeeccCCCC
Q 025456 135 DSEAVVCATGFQPGW-----------------DLFAPWKVDNFGTVNLVEAC----RKR-GVNRFILISSILVNGAAMGQ 192 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~-----------------~~~~~~~~n~~g~~~ll~~~----~~~-~~~~~v~~SS~~v~~~~~~~ 192 (252)
++|+||||+|..... ++...+++|+.++.++++.+ .+. .-+++|++||...++..
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~--- 158 (253)
T PRK08217 82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM--- 158 (253)
T ss_pred CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC---
Confidence 389999999863311 12234678999998777654 232 23579999997655321
Q ss_pred CCCcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 193 ILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 193 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
....|..+|++.+.+++ +.+++++.++||.+.++..
T Consensus 159 ----------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~ 201 (253)
T PRK08217 159 ----------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMT 201 (253)
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccc
Confidence 24678999998887654 3589999999999988753
No 231
>PRK07069 short chain dehydrogenase; Validated
Probab=99.81 E-value=4.9e-19 Score=147.07 Aligned_cols=158 Identities=15% Similarity=0.133 Sum_probs=114.9
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCeEEEeecC-chhhhhccc---cC--CCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTLS---KD--NPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~-~~~~~~~~~---~~--~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
+++||||+|+||.++++.|+++|++|++++|+ .+..++... .. ...+.++++|++| .+++.+++.. +
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD-EAQWQALLAQAADAMGG 79 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 48999999999999999999999999999998 444332211 11 1234568899999 6666555431 3
Q ss_pred CcEEEEcCCCCCCC--------CCCCcceehHH----HHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 136 SEAVVCATGFQPGW--------DLFAPWKVDNF----GTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 136 ~d~vi~~ag~~~~~--------~~~~~~~~n~~----g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
+|+||||+|..... ++...+++|+. ++..+++.+++.+.++||++||...+... ..
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~------------~~ 147 (251)
T PRK07069 80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE------------PD 147 (251)
T ss_pred ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC------------CC
Confidence 89999999875421 23345678888 56677777777777899999998655322 12
Q ss_pred hhHHHHHHHHHHHHHHH---------cCCcEEEEeCCcccCCCC
Q 025456 204 FGLTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~~---------~gi~~~~lrPg~i~~~~~ 238 (252)
+..|+.+|.+.+.+.+. .+++++.++||.+.++..
T Consensus 148 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~ 191 (251)
T PRK07069 148 YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIV 191 (251)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcch
Confidence 35688999988876542 258999999999998864
No 232
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=6.7e-19 Score=146.33 Aligned_cols=161 Identities=16% Similarity=0.099 Sum_probs=117.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCch-hhhhc---cccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
+++++++||||+||||++++++|+++|++|++..|+.. ..... ......++.++.+|+++ .+++.+.++.
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRY 82 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHc
Confidence 45799999999999999999999999999988776432 22211 11123457788999999 6655555431
Q ss_pred -CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 135 -DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 135 -~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
++|+||||||..... +++..+++|+.++.++++++.+. ..++||++||...+.. ..+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~ 150 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP------------AYG 150 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC------------CCC
Confidence 389999999963321 12355789999999988888643 2358999999865532 234
Q ss_pred hhHHHHHHHHHHHHHHH------cCCcEEEEeCCcccCCC
Q 025456 204 FGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~~------~gi~~~~lrPg~i~~~~ 237 (252)
...|+.+|++.+.+++. .++++++++||.+.++.
T Consensus 151 ~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~ 190 (252)
T PRK06077 151 LSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKL 190 (252)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChH
Confidence 57899999999877652 37999999999998875
No 233
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.81 E-value=4e-19 Score=148.98 Aligned_cols=159 Identities=19% Similarity=0.280 Sum_probs=113.7
Q ss_pred CCCcEEEEEcC--CChHHHHHHHHHHHCCCeEEEeecCch---hhhhccccCCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 64 VKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 64 ~~~~~vlVtGa--tG~iG~~l~~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
+++|+++|||| +++||++++++|+++|++|++..|... ..++... .......+++|++| .+++.+++..
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~ 81 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAA-ELDSELVFRCDVAS-DDEINQVFADLGKH 81 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHh-ccCCceEEECCCCC-HHHHHHHHHHHHHH
Confidence 46899999997 679999999999999999998776532 1222211 11235678999999 7666655532
Q ss_pred --CCcEEEEcCCCCCCC-------------CCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCC
Q 025456 135 --DSEAVVCATGFQPGW-------------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILN 195 (252)
Q Consensus 135 --~~d~vi~~ag~~~~~-------------~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~ 195 (252)
++|++|||||+.... +++..+++|+.++.++.+.+. +.+ ++||++||......
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g~Iv~iss~~~~~~------- 153 (261)
T PRK08690 82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-SAIVALSYLGAVRA------- 153 (261)
T ss_pred hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-cEEEEEcccccccC-------
Confidence 499999999975321 123346789999888777652 333 68999998753211
Q ss_pred cchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 196 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 196 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
...+..|..+|++.+.+.+ ++|+++++|.||.+.++.
T Consensus 154 -----~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~ 197 (261)
T PRK08690 154 -----IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLA 197 (261)
T ss_pred -----CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchh
Confidence 1224678999999887654 468999999999998875
No 234
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.81 E-value=3.7e-19 Score=149.12 Aligned_cols=161 Identities=12% Similarity=0.148 Sum_probs=115.4
Q ss_pred cCCCcEEEEEcCCC--hHHHHHHHHHHHCCCeEEEeecCchh---hhhccccCCCCeEEEEeeCCCChHHHHHHHcC---
Q 025456 63 SVKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLDK---AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG--~iG~~l~~~L~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--- 134 (252)
.+++|+++||||++ +||++++++|+++|++|++.+|+... .+++.. ......++++|++| .++++++++.
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~-~~g~~~~~~~Dv~~-~~~v~~~~~~~~~ 82 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAE-EIGCNFVSELDVTN-PKSISNLFDDIKE 82 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHH-hcCCceEEEccCCC-HHHHHHHHHHHHH
Confidence 35689999999997 89999999999999999988887321 112211 11223467899999 6666655532
Q ss_pred ---CCcEEEEcCCCCCC------------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcc
Q 025456 135 ---DSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPA 197 (252)
Q Consensus 135 ---~~d~vi~~ag~~~~------------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~ 197 (252)
++|++|||+|.... .+|+..+++|+.++..+++.+... .-++||++||......
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~--------- 153 (260)
T PRK06603 83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV--------- 153 (260)
T ss_pred HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC---------
Confidence 49999999986421 134456789999999988876321 1268999999743210
Q ss_pred hhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
...+..|+.+|++.+.+.+ ..|+++++|.||.+.++.
T Consensus 154 ---~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~ 197 (260)
T PRK06603 154 ---IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLA 197 (260)
T ss_pred ---CCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchh
Confidence 1124678999999887654 368999999999998874
No 235
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.81 E-value=4.8e-19 Score=148.11 Aligned_cols=160 Identities=18% Similarity=0.199 Sum_probs=115.1
Q ss_pred CCCcEEEEEcC--CChHHHHHHHHHHHCCCeEEEeecCc--hhhhhccccCCCCeEEEEeeCCCChHHHHHHHc------
Q 025456 64 VKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDL--DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG------ 133 (252)
Q Consensus 64 ~~~~~vlVtGa--tG~iG~~l~~~L~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~------ 133 (252)
+++|+++|||| +++||.+++++|+++|++|++++|+. +..++.......++.++++|++| .+++++++.
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 45799999999 89999999999999999999988764 22222222122357789999999 666665543
Q ss_pred CCCcEEEEcCCCCCC------------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchh
Q 025456 134 DDSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYI 199 (252)
Q Consensus 134 ~~~d~vi~~ag~~~~------------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~ 199 (252)
+++|++|||||+... +++...+++|+.++.++++.+... .-+++|++|+....
T Consensus 84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~------------- 150 (256)
T PRK07889 84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV------------- 150 (256)
T ss_pred CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc-------------
Confidence 249999999997531 112335789999998888776421 22589988754210
Q ss_pred ccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
....+..|+.+|++.+.+.+ +.|+++++|.||.+.++.
T Consensus 151 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 195 (256)
T PRK07889 151 AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLA 195 (256)
T ss_pred cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChh
Confidence 01235678999999887654 368999999999999875
No 236
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.81 E-value=5.8e-19 Score=148.09 Aligned_cols=164 Identities=20% Similarity=0.156 Sum_probs=122.4
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---c---CCCCeEEEEeeCCCChHHHHHHH---
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K---DNPSLQIVKADVTEGSAKLSEAI--- 132 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~---~~~~~~~i~~Dl~d~~~~~~~~~--- 132 (252)
..+++|+++||||+.+||++++++|++.|++|++.+|+.+..+.... . ...++..+.+|+++ .+++++.+
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~l~~~~ 82 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK-EVDVEKLVEFA 82 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC-HHHHHHHHHHH
Confidence 45679999999999999999999999999999999999876543221 1 23568899999998 44433332
Q ss_pred ----cCCCcEEEEcCCCCCC---------CCCCCcceehHHH-HHHHHHHH----HhcCCCEEEEEccceeeccCCCCCC
Q 025456 133 ----GDDSEAVVCATGFQPG---------WDLFAPWKVDNFG-TVNLVEAC----RKRGVNRFILISSILVNGAAMGQIL 194 (252)
Q Consensus 133 ----~~~~d~vi~~ag~~~~---------~~~~~~~~~n~~g-~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~ 194 (252)
.+++|++|||||.... ++|+..+++|+.| ..++.+++ ++.+.+.++++||...+.....
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~--- 159 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG--- 159 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC---
Confidence 2359999999997542 2466778999995 66666665 3445578999998854322111
Q ss_pred CcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 195 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 195 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
....|+.+|.+.+++.+ ++|+|+++|.||.+.++.
T Consensus 160 --------~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 160 --------SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred --------CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 11568899999998775 469999999999999986
No 237
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.81 E-value=5.5e-19 Score=145.87 Aligned_cols=159 Identities=21% Similarity=0.258 Sum_probs=114.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeec-Cchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------CC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~ 136 (252)
|+++||||+|+||++++++|+++|++|+++.| +++...+.. .....++.++.+|++| .+++.+.+.+ ++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999999999888 433332211 1123468899999999 6666554431 38
Q ss_pred cEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHH----HHhcCCCEEEEEccceeeccCCCCCCCcchhccchh
Q 025456 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEA----CRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (252)
Q Consensus 137 d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~ 204 (252)
|+||||+|.... .++...+++|+.++.++++. +++.+.++||++||....... ..+
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~------------~~~ 147 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ------------FGQ 147 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC------------CCc
Confidence 999999986532 12344568899997775554 456677899999997432111 123
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..|..+|.+.+.+++ ..+++++.++||.+.++..
T Consensus 148 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~ 188 (242)
T TIGR01829 148 TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMV 188 (242)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccc
Confidence 568889987765543 3589999999999988753
No 238
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.81 E-value=2.9e-19 Score=148.32 Aligned_cols=160 Identities=19% Similarity=0.251 Sum_probs=113.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEee-cCchhhhhc---cccCCCCeEEEEeeCCCChHHHHHHHc------CC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGV-RDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIG------DD 135 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~-r~~~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~------~~ 135 (252)
+|+++||||+|+||.++++.|+++|++|+++. |+++..+.. +.....++.++++|++| .+++.+++. ++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN-EADVIAMFDAVQSAFGR 80 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCC-HHHHHHHHHHHHHhcCC
Confidence 57999999999999999999999999998765 444433322 11123468899999999 666655443 14
Q ss_pred CcEEEEcCCCCCCC---------CCCCcceehHHHHHHHHHHHH-h---cC---CCEEEEEccceee-ccCCCCCCCcch
Q 025456 136 SEAVVCATGFQPGW---------DLFAPWKVDNFGTVNLVEACR-K---RG---VNRFILISSILVN-GAAMGQILNPAY 198 (252)
Q Consensus 136 ~d~vi~~ag~~~~~---------~~~~~~~~n~~g~~~ll~~~~-~---~~---~~~~v~~SS~~v~-~~~~~~~~~~~~ 198 (252)
+|+||||||..... ++...+.+|+.++.++++.+. . .+ -++||++||...+ +..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~--------- 151 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP--------- 151 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC---------
Confidence 99999999964321 123457899999988876542 2 11 2469999987532 211
Q ss_pred hccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
..+..|+.+|.+.+.+++ ..|+++++++||.+.++..
T Consensus 152 ---~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~ 195 (248)
T PRK06947 152 ---NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIH 195 (248)
T ss_pred ---CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccc
Confidence 113468899998886653 2489999999999998853
No 239
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.80 E-value=1.7e-18 Score=147.56 Aligned_cols=174 Identities=17% Similarity=0.245 Sum_probs=125.5
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc----c-cCCCCeEEEEeeCCCChHHHHHHHcC--
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----S-KDNPSLQIVKADVTEGSAKLSEAIGD-- 134 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~-- 134 (252)
.++.+++++||||+++||.+++++|+.+|.+|++..|+..+.++.. . ....++.++++|+++ .+++.+....
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLss-l~SV~~fa~~~~ 109 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSS-LKSVRKFAEEFK 109 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC-HHHHHHHHHHHH
Confidence 4456899999999999999999999999999999999986554322 1 134578889999999 7777665432
Q ss_pred ----CCcEEEEcCCCCC------CCCCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccC-CCCCCCcchh
Q 025456 135 ----DSEAVVCATGFQP------GWDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAA-MGQILNPAYI 199 (252)
Q Consensus 135 ----~~d~vi~~ag~~~------~~~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~-~~~~~~~~~~ 199 (252)
++|++|||||+.. .+..+..+.+|+.|.+.+.+.+ +.....|||++||... +.. .-...+....
T Consensus 110 ~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~ 188 (314)
T KOG1208|consen 110 KKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKA 188 (314)
T ss_pred hcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhc
Confidence 5999999999754 2345677899999988777765 4444369999999864 111 0001111111
Q ss_pred c-cchhhHHHHHHHHHHHHHH----H--cCCcEEEEeCCcccCCC
Q 025456 200 F-LNVFGLTLIAKLQAEQYIR----K--SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 200 ~-~~~~~~y~~sK~~~e~~~~----~--~gi~~~~lrPg~i~~~~ 237 (252)
. ......|+.||.+...+.. + .|+.++.+.||.+.+..
T Consensus 189 ~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~ 233 (314)
T KOG1208|consen 189 KLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG 233 (314)
T ss_pred cCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence 1 3444569999998764442 2 28999999999998873
No 240
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.80 E-value=5.3e-19 Score=148.97 Aligned_cols=158 Identities=18% Similarity=0.214 Sum_probs=114.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cC-CCCeEEEEeeCCCChHHHHHHHcC------CC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KD-NPSLQIVKADVTEGSAKLSEAIGD------DS 136 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~-~~~~~~i~~Dl~d~~~~~~~~~~~------~~ 136 (252)
|+++||||+|+||.+++++|+++|++|++++|+.+..+.... .. ...+.++.+|++| .+++.+.+.. ++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence 479999999999999999999999999999998765443221 11 1234567899999 6665544432 38
Q ss_pred cEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hc-CCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KR-GVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 137 d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~-~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
|+||||+|.... .+++..+++|+.++.++++++. +. ..++||++||...+.. ...
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~------------~~~ 147 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA------------LPW 147 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC------------CCC
Confidence 999999986432 1234567899999999999873 22 2368999999753211 112
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
+..|+.+|.+.+.+.+ .+++++++++||.+.++.
T Consensus 148 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 148 HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL 188 (272)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 3568888987765543 468999999999998875
No 241
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.80 E-value=3.6e-19 Score=147.00 Aligned_cols=165 Identities=15% Similarity=0.198 Sum_probs=122.8
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHH-------HHHHH
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAK-------LSEAI 132 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~-------~~~~~ 132 (252)
.+.++++|+||||++|+|++++.+++++|..+++.+.+.+..++..+. ...+++.+.+|++| .++ +++.+
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEV 112 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhc
Confidence 456799999999999999999999999999999999987665543221 11368999999999 444 44444
Q ss_pred cCCCcEEEEcCCCCCC--------CCCCCcceehHHHHHHH----HHHHHhcCCCEEEEEccceeeccCCCCCCCcchhc
Q 025456 133 GDDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNL----VEACRKRGVNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 133 ~~~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~l----l~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
+. +|++|||||+... ++.+..+++|+.|.+.. +..+.+.+-+++|.++|...+-..
T Consensus 113 G~-V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~----------- 180 (300)
T KOG1201|consen 113 GD-VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGP----------- 180 (300)
T ss_pred CC-ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCC-----------
Confidence 44 9999999998652 22345689999996665 444566666899999998654222
Q ss_pred cchhhHHHHHHHHHHHHHH----------HcCCcEEEEeCCcccCCCCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR----------KSGINYTIIRPGGLRNEPPTG 240 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~----------~~gi~~~~lrPg~i~~~~~~~ 240 (252)
.....|..||+++..+.+ ..|++.+.+-|+.+.+.+-.+
T Consensus 181 -~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~ 229 (300)
T KOG1201|consen 181 -AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG 229 (300)
T ss_pred -ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence 234678899998865443 247999999999998876543
No 242
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.80 E-value=5.1e-19 Score=147.30 Aligned_cols=158 Identities=23% Similarity=0.289 Sum_probs=117.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
|+++||||+|+||.+++++|+++|++|+++.|+.+..++.. .....++.++.+|++| .+++.+++.. ++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCCC
Confidence 58999999999999999999999999999999865543322 1134568899999999 7776665432 389
Q ss_pred EEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEccceeeccCCCCCCCcchhccchh
Q 025456 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (252)
Q Consensus 138 ~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~ 204 (252)
+||||+|.... .+++..+++|+.++.++++++. +.+ .+++|++||....... ..+
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~ 147 (254)
T TIGR02415 80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN------------PIL 147 (254)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC------------CCC
Confidence 99999987432 1234567899999988777663 333 2689999986432111 124
Q ss_pred hHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccCCC
Q 025456 205 GLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 205 ~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~~~ 237 (252)
..|+.+|++.+.+++. .++++++++||.+.++.
T Consensus 148 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~ 187 (254)
T TIGR02415 148 SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPM 187 (254)
T ss_pred cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChh
Confidence 6788999998877642 48999999999998775
No 243
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.4e-18 Score=142.87 Aligned_cols=158 Identities=11% Similarity=0.033 Sum_probs=115.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHc------C
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG------D 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~------~ 134 (252)
+++++++||||+++||++++++|+++|++|++++|+.+..++... ....++..+.+|++| .+++.+++. +
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFN 81 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 468999999999999999999999999999999999876654322 123457788899999 666655442 2
Q ss_pred -CCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHH----HhcC-CCEEEEEccceeeccCCCCCCCcchh
Q 025456 135 -DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRG-VNRFILISSILVNGAAMGQILNPAYI 199 (252)
Q Consensus 135 -~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~----~~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~ 199 (252)
++|++|||+|.... .++.+.+++|+.++..+++.+ ++.+ .+.||++||...+
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------------- 148 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH------------- 148 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-------------
Confidence 49999999974321 122334567777776665543 4433 4689999986321
Q ss_pred ccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..+..|..+|++.+.+.+ .+|++++.|.||.+.++.
T Consensus 149 --~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 149 --QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG 191 (227)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence 124568899999887664 368999999999998874
No 244
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.80 E-value=6.3e-19 Score=147.29 Aligned_cols=161 Identities=18% Similarity=0.211 Sum_probs=121.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCe-EEEeecCchhhhhc---cccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
+++++++||||+|+||.+++++|+++|++ |++++|+.+..... +.....++.++.+|+++ .+++.+++..
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAF 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 46899999999999999999999999998 99999986554321 11133467889999999 7766665532
Q ss_pred -CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEccceeeccCCCCCCCcchhc
Q 025456 135 -DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 135 -~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
++|+||||+|..... +++..+++|+.++.++++++. +.+ .+++|++||...++..
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------- 151 (260)
T PRK06198 83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ----------- 151 (260)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-----------
Confidence 389999999875421 223457899999999888773 222 3689999998765422
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.....|+.+|.+.|.+.+ ..+++++.++||++.++.
T Consensus 152 -~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~ 194 (260)
T PRK06198 152 -PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG 194 (260)
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence 124678999999987765 247999999999998875
No 245
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.80 E-value=5.5e-19 Score=148.08 Aligned_cols=160 Identities=16% Similarity=0.190 Sum_probs=114.4
Q ss_pred CCCcEEEEEcC--CChHHHHHHHHHHHCCCeEEEeecC---chhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 64 VKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRD---LDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 64 ~~~~~vlVtGa--tG~iG~~l~~~L~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
+++|+++|||| +++||++++++|+++|++|++++|. .+..+...... .....+++|++| .+++.++++.
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d-~~~v~~~~~~~~~~ 81 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-GSDLVFPCDVAS-DEQIDALFASLGQH 81 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc-CCcceeeccCCC-HHHHHHHHHHHHHH
Confidence 46899999996 6799999999999999999987654 22222222111 223468899999 6666655532
Q ss_pred --CCcEEEEcCCCCCC-------------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcc
Q 025456 135 --DSEAVVCATGFQPG-------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPA 197 (252)
Q Consensus 135 --~~d~vi~~ag~~~~-------------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~ 197 (252)
++|++|||||.... .+|+..+++|+.++.++++++... +-+++|++||..... +
T Consensus 82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~---~------ 152 (260)
T PRK06997 82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER---V------ 152 (260)
T ss_pred hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc---C------
Confidence 49999999997431 123456789999999888887432 226899999875321 1
Q ss_pred hhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
...+..|..+|++.+.+.+ ++|++++.|.||.+.++.
T Consensus 153 ---~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~ 196 (260)
T PRK06997 153 ---VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLA 196 (260)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccch
Confidence 1124569999999887664 358999999999998864
No 246
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.4e-18 Score=144.35 Aligned_cols=158 Identities=16% Similarity=0.213 Sum_probs=112.7
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
++++++++||||+|+||++++++|+++|++|++++|+......... . .....+.+|++| .+++.+.+++ +|++|||
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~-~~~~~~~~D~~~-~~~~~~~~~~-iDilVnn 86 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-E-SPNEWIKWECGK-EESLDKQLAS-LDVLILN 86 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-c-CCCeEEEeeCCC-HHHHHHhcCC-CCEEEEC
Confidence 4568999999999999999999999999999999998622211111 1 123678899999 8888888887 9999999
Q ss_pred CCCCCC-----CCCCCcceehHHHHHHHHHHHHh----c---CCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHH
Q 025456 143 TGFQPG-----WDLFAPWKVDNFGTVNLVEACRK----R---GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA 210 (252)
Q Consensus 143 ag~~~~-----~~~~~~~~~n~~g~~~ll~~~~~----~---~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~s 210 (252)
||.... .++++.+++|+.++.++++++.. . +.+.++..||..... + .....|+.+
T Consensus 87 AG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~--------~-----~~~~~Y~aS 153 (245)
T PRK12367 87 HGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ--------P-----ALSPSYEIS 153 (245)
T ss_pred CccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC--------C-----CCCchhHHH
Confidence 997432 24556789999999999988732 1 122343444432111 0 013569999
Q ss_pred HHHHHHHH---H-------HcCCcEEEEeCCcccCCC
Q 025456 211 KLQAEQYI---R-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 211 K~~~e~~~---~-------~~gi~~~~lrPg~i~~~~ 237 (252)
|++.+.+. + +.++.++.+.||.+.++.
T Consensus 154 Kaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~ 190 (245)
T PRK12367 154 KRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL 190 (245)
T ss_pred HHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc
Confidence 99874322 1 358999999999987764
No 247
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.79 E-value=8.5e-19 Score=144.71 Aligned_cols=157 Identities=20% Similarity=0.214 Sum_probs=114.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEeecCch-hhhhc---cccCCCCeEEEEeeCCCChHHHHHHHcC------CCcE
Q 025456 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d~ 138 (252)
++||||+|+||.+++++|+++|++|++++|..+ ..+.. +.....++.++.+|++| .+++.+++.. ++|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVAD-RVACRTLLEADIAEHGAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999998887643 22221 12234568999999999 7666655432 4899
Q ss_pred EEEcCCCCCC--------CCCCCcceehHHHHHHHHHHH-----HhcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 139 VVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC-----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 139 vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~-----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
+|||+|.... .++...+++|+.++.++++++ ++.+.++||++||...+... ....
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~~ 147 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN------------RGQV 147 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCC------------CCCc
Confidence 9999986432 234556889999999998875 23445789999997532211 1235
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.|..+|++.+.+.+ ..|++++.++||.+.++..
T Consensus 148 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 187 (239)
T TIGR01831 148 NYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEML 187 (239)
T ss_pred chHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccc
Confidence 68888887765543 3589999999999988864
No 248
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.79 E-value=2.6e-18 Score=141.70 Aligned_cols=162 Identities=18% Similarity=0.100 Sum_probs=117.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcC------C
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------D 135 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~------~ 135 (252)
+++++|+||||+|+||.++++.|+++|++|++++|+++..+..... ...+++++++|++| .+++.+.+++ +
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4579999999999999999999999999999999987765432111 12368899999999 6666554432 3
Q ss_pred CcEEEEcCCCCCCC------CCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhccchhhHH
Q 025456 136 SEAVVCATGFQPGW------DLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (252)
Q Consensus 136 ~d~vi~~ag~~~~~------~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y 207 (252)
+|.+||++|..... +++..+++|+.+..++++.+... ..+++|++||...... +......|
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~~Y 150 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK-----------ASPDQLSY 150 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc-----------CCCCchHH
Confidence 79999999854321 12344678888888887777432 2258999998643110 01234679
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 208 ~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
..+|.+.+.+++ ..++++++++||+++++.
T Consensus 151 ~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~ 187 (238)
T PRK05786 151 AVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDF 187 (238)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence 999998876543 358999999999999874
No 249
>PRK08324 short chain dehydrogenase; Validated
Probab=99.79 E-value=1.6e-18 Score=163.27 Aligned_cols=159 Identities=23% Similarity=0.293 Sum_probs=121.7
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccC--CCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD--NPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
.+.+++++||||+|+||+++++.|+++|++|++++|+.+..+...... ..++.++.+|++| .+++.+++..
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFG 497 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999999999987654332211 1478899999999 7766665531
Q ss_pred CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHH----HhcCC-CEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGV-NRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~----~~~~~-~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
++|+||||||..... ++...+++|+.++.++++++ ++.+. ++||++||...+...
T Consensus 498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~------------ 565 (681)
T PRK08324 498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG------------ 565 (681)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC------------
Confidence 399999999965421 24456789999999997776 44454 699999997543211
Q ss_pred chhhHHHHHHHHHHHHHHH-------cCCcEEEEeCCccc
Q 025456 202 NVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLR 234 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~ 234 (252)
.....|+.+|.+.+.+++. .|+++++++|+.++
T Consensus 566 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~ 605 (681)
T PRK08324 566 PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVV 605 (681)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceee
Confidence 2247899999999887652 47999999999995
No 250
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.78 E-value=3.2e-18 Score=160.72 Aligned_cols=161 Identities=20% Similarity=0.245 Sum_probs=119.1
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc-----CCCCeEEEEeeCCCChHHHHHHHcC--
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD-- 134 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~i~~Dl~d~~~~~~~~~~~-- 134 (252)
..+++|+++||||+|+||++++++|+++|++|++++|+.+..+..... ...++..+++|++| .+++.+++..
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~ 488 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVA 488 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHH
Confidence 446789999999999999999999999999999999987655432211 12357789999999 7777766642
Q ss_pred ----CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHH----HhcC-CCEEEEEccceeeccCCCCCCCcc
Q 025456 135 ----DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRG-VNRFILISSILVNGAAMGQILNPA 197 (252)
Q Consensus 135 ----~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~----~~~~-~~~~v~~SS~~v~~~~~~~~~~~~ 197 (252)
++|+||||||..... ++...+++|+.+...+++.+ ++.+ .++||++||...+..
T Consensus 489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~--------- 559 (676)
T TIGR02632 489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYA--------- 559 (676)
T ss_pred HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCC---------
Confidence 399999999975421 23455678888877765444 4444 358999999743211
Q ss_pred hhccchhhHHHHHHHHHHHHHHH-------cCCcEEEEeCCcccC
Q 025456 198 YIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRN 235 (252)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~~-------~gi~~~~lrPg~i~~ 235 (252)
......|+.+|++.+.+++. .|++++.|+||.+.+
T Consensus 560 ---~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~ 601 (676)
T TIGR02632 560 ---GKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQ 601 (676)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceec
Confidence 11247899999999887652 589999999998864
No 251
>PRK05599 hypothetical protein; Provisional
Probab=99.78 E-value=4.7e-18 Score=141.25 Aligned_cols=158 Identities=19% Similarity=0.168 Sum_probs=112.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc---cC-CCCeEEEEeeCCCChHHHHHHHc------CCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KD-NPSLQIVKADVTEGSAKLSEAIG------DDS 136 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~-~~~~~~i~~Dl~d~~~~~~~~~~------~~~ 136 (252)
|+++||||+++||.+++++|+ +|++|++++|+.++.++... .. ...+.++++|++| .+++++++. +++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQD-LDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCC-HHHHHHHHHHHHHhcCCC
Confidence 579999999999999999998 59999999998876654321 11 2347889999999 666655432 249
Q ss_pred cEEEEcCCCCCCCC--------CCCcceehHHHHHHHHHH----HHhcC-CCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 137 EAVVCATGFQPGWD--------LFAPWKVDNFGTVNLVEA----CRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 137 d~vi~~ag~~~~~~--------~~~~~~~n~~g~~~ll~~----~~~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
|++|||+|...... +.+.+++|+.+..+++.. +++.+ -++||++||...+-. ...
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~------------~~~ 146 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA------------RRA 146 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC------------CcC
Confidence 99999999753211 113356788887765544 44443 368999999753211 112
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
...|..+|++.+.+.+ ..|++++.+.||.+.++..
T Consensus 147 ~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~ 188 (246)
T PRK05599 147 NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT 188 (246)
T ss_pred CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh
Confidence 4578999998876654 3589999999999988753
No 252
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.78 E-value=2.1e-18 Score=162.49 Aligned_cols=148 Identities=18% Similarity=0.168 Sum_probs=111.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT 143 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~a 143 (252)
..|+||||||+||||++|++.|.++|++|... .+|++| .+.+.+.+.. ++|+|||+|
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~---------------------~~~l~d-~~~v~~~i~~~~pd~Vih~A 436 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG---------------------KGRLED-RSSLLADIRNVKPTHVFNAA 436 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEee---------------------cccccc-HHHHHHHHHhhCCCEEEECC
Confidence 45799999999999999999999999987311 135777 6777777764 599999999
Q ss_pred CCCCC-------CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCC------CCCCCcchhccchhhHHHHH
Q 025456 144 GFQPG-------WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAM------GQILNPAYIFLNVFGLTLIA 210 (252)
Q Consensus 144 g~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~------~~~~~~~~~~~~~~~~y~~s 210 (252)
+.... .++...+++|+.|+.+++++|++.++ ++|++||.++|+... +.+..++..+..+.+.|+.+
T Consensus 437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~s 515 (668)
T PLN02260 437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKT 515 (668)
T ss_pred cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHH
Confidence 87531 24556788999999999999999998 577888888875321 22444444333344789999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCcccCC
Q 025456 211 KLQAEQYIRKSGINYTIIRPGGLRNE 236 (252)
Q Consensus 211 K~~~e~~~~~~gi~~~~lrPg~i~~~ 236 (252)
|.++|++++.+ .++.++|+.++++.
T Consensus 516 K~~~E~~~~~~-~~~~~~r~~~~~~~ 540 (668)
T PLN02260 516 KAMVEELLREY-DNVCTLRVRMPISS 540 (668)
T ss_pred HHHHHHHHHhh-hhheEEEEEEeccc
Confidence 99999999875 36667777777753
No 253
>PRK12320 hypothetical protein; Provisional
Probab=99.78 E-value=5.8e-18 Score=157.08 Aligned_cols=137 Identities=26% Similarity=0.357 Sum_probs=109.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~ 146 (252)
|+|+||||+||||++++++|+++|++|++++|.+... ...+++++.+|++| .. +.+++.+ +|+|||+|+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------~~~~ve~v~~Dl~d-~~-l~~al~~-~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------LDPRVDYVCASLRN-PV-LQELAGE-ADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------ccCCceEEEccCCC-HH-HHHHhcC-CCEEEEcCccC
Confidence 4799999999999999999999999999999875431 12468999999998 54 7778888 99999999864
Q ss_pred CCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHcCCcEE
Q 025456 147 PGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYT 226 (252)
Q Consensus 147 ~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ 226 (252)
.. ....+|+.|+.+++++|++.++ ++||+||. +|.. . .|. .+|.++..++++++
T Consensus 72 ~~----~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~------~---------~~~----~aE~ll~~~~~p~~ 125 (699)
T PRK12320 72 TS----APGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRP------E---------LYR----QAETLVSTGWAPSL 125 (699)
T ss_pred cc----chhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCC------c---------ccc----HHHHHHHhcCCCEE
Confidence 32 1235899999999999999997 89999986 2211 0 011 35777777789999
Q ss_pred EEeCCcccCCCC
Q 025456 227 IIRPGGLRNEPP 238 (252)
Q Consensus 227 ~lrPg~i~~~~~ 238 (252)
++|++++||+..
T Consensus 126 ILR~~nVYGp~~ 137 (699)
T PRK12320 126 VIRIAPPVGRQL 137 (699)
T ss_pred EEeCceecCCCC
Confidence 999999999854
No 254
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.78 E-value=3.9e-18 Score=143.33 Aligned_cols=156 Identities=21% Similarity=0.189 Sum_probs=109.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecC-chhhhhc---ccc-CCCCeEEEEeeCCCChHHH----HHHH-----
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTT---LSK-DNPSLQIVKADVTEGSAKL----SEAI----- 132 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~-~~~~~~~---~~~-~~~~~~~i~~Dl~d~~~~~----~~~~----- 132 (252)
++++||||+|+||++++++|+++|++|+++.|+ .+..+.. +.. ...++.++.+|++| .+++ .+.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSN-SATLFSRCEAIIDACFR 80 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCC-chhhHHHHHHHHHHHHH
Confidence 689999999999999999999999999988764 3333322 111 12356778999999 5432 2222
Q ss_pred --cCCCcEEEEcCCCCCC-----CC--------------CCCcceehHHHHHHHHHHHHhc----------CCCEEEEEc
Q 025456 133 --GDDSEAVVCATGFQPG-----WD--------------LFAPWKVDNFGTVNLVEACRKR----------GVNRFILIS 181 (252)
Q Consensus 133 --~~~~d~vi~~ag~~~~-----~~--------------~~~~~~~n~~g~~~ll~~~~~~----------~~~~~v~~S 181 (252)
.+ +|+||||||.... .+ +...+++|+.++.++++++... ..+++|++|
T Consensus 81 ~~g~-iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~ 159 (267)
T TIGR02685 81 AFGR-CDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC 159 (267)
T ss_pred ccCC-ceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence 34 9999999996431 11 2245789999999998876321 123688888
Q ss_pred cceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCC
Q 025456 182 SILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNE 236 (252)
Q Consensus 182 S~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~ 236 (252)
|..... +...+..|+.+|++.+.+.+ ..|+++++|+||.+.++
T Consensus 160 s~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~ 209 (267)
T TIGR02685 160 DAMTDQ------------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP 209 (267)
T ss_pred hhhccC------------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence 763211 12335679999999987765 35899999999998655
No 255
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.77 E-value=3.1e-17 Score=142.32 Aligned_cols=174 Identities=43% Similarity=0.591 Sum_probs=127.9
Q ss_pred hcccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccc--cCCCCeEEEEeeCCCChHHHHHHHcC---
Q 025456 60 ENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (252)
Q Consensus 60 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~--- 134 (252)
.....+.++|+|+||||.+|+-+++.|+++|+.|++++|+..+..+.+. ..+.....+..|...+.+.+......
T Consensus 73 ~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~ 152 (411)
T KOG1203|consen 73 NNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPK 152 (411)
T ss_pred CCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccc
Confidence 3345567999999999999999999999999999999999887766543 12445666777766634444444433
Q ss_pred CCcEEEEcCCCCCCC-CCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHH
Q 025456 135 DSEAVVCATGFQPGW-DLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQ 213 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~-~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~ 213 (252)
...+++-|+|..++. |....+.++..|+.|++++|+.+|++|+|++||++.-- .+..+........+..+|..
T Consensus 153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~------~~~~~~~~~~~~~~~~~k~~ 226 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTK------FNQPPNILLLNGLVLKAKLK 226 (411)
T ss_pred cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcc------cCCCchhhhhhhhhhHHHHh
Confidence 134666677655543 34455689999999999999999999999999875311 11222222224566789999
Q ss_pred HHHHHHHcCCcEEEEeCCcccCCCCC
Q 025456 214 AEQYIRKSGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 214 ~e~~~~~~gi~~~~lrPg~i~~~~~~ 239 (252)
+|+++++.|+++++||||....+...
T Consensus 227 ~e~~~~~Sgl~ytiIR~g~~~~~~~~ 252 (411)
T KOG1203|consen 227 AEKFLQDSGLPYTIIRPGGLEQDTGG 252 (411)
T ss_pred HHHHHHhcCCCcEEEeccccccCCCC
Confidence 99999999999999999987775443
No 256
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.77 E-value=4.6e-18 Score=140.01 Aligned_cols=155 Identities=21% Similarity=0.234 Sum_probs=114.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEeecCch-hhhh---ccccCCCCeEEEEeeCCCChHHHHHHHcC------CCcE
Q 025456 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-~~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d~ 138 (252)
++|||++|+||++++++|+++|++|++++|+.. .... .+.....++.++.+|++| .+++.+.+.+ ++|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSD-REDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCCE
Confidence 589999999999999999999999999988752 2211 122123458899999999 7766665532 3899
Q ss_pred EEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHh----cCCCEEEEEcccee-eccCCCCCCCcchhccchhh
Q 025456 139 VVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILV-NGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 139 vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~----~~~~~~v~~SS~~v-~~~~~~~~~~~~~~~~~~~~ 205 (252)
|||++|.... .+++..+++|+.++.++++.+.. .+.++||++||... ++.. ...
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~-------------~~~ 146 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA-------------GQA 146 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC-------------CCc
Confidence 9999997532 12345678999999999998854 45579999999754 3321 235
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
.|+.+|.+.+.+++ ..|+++++++||.+.++.
T Consensus 147 ~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~ 185 (239)
T TIGR01830 147 NYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDM 185 (239)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChh
Confidence 68889987776543 258999999999987754
No 257
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.77 E-value=1.8e-18 Score=144.57 Aligned_cols=157 Identities=15% Similarity=0.196 Sum_probs=114.9
Q ss_pred EEEEEcCCChHHHHHHHHHHH----CCCeEEEeecCchhhhhccc---c--CCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 68 KIFVAGATGSSGKRIVEQLLA----KGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~----~G~~V~~~~r~~~~~~~~~~---~--~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
+++||||+++||.+++++|++ +|++|+++.|+.+..++... . ...++.++.+|++| .+++.+++..
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGA-EAGLEQLLKALREL 80 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCC-HHHHHHHHHHHHhc
Confidence 689999999999999999997 79999999998776543221 1 12368889999999 7766655432
Q ss_pred --C----CcEEEEcCCCCCC-----C------CCCCcceehHHHHHHHHHHHH----hc-C-CCEEEEEccceeeccCCC
Q 025456 135 --D----SEAVVCATGFQPG-----W------DLFAPWKVDNFGTVNLVEACR----KR-G-VNRFILISSILVNGAAMG 191 (252)
Q Consensus 135 --~----~d~vi~~ag~~~~-----~------~~~~~~~~n~~g~~~ll~~~~----~~-~-~~~~v~~SS~~v~~~~~~ 191 (252)
. .|+||||||.... . +++..+++|+.++.++++.+. +. + .++||++||...+..
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~--- 157 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP--- 157 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC---
Confidence 1 2699999986321 1 123467899999888777663 32 2 258999999754321
Q ss_pred CCCCcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 192 QILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 192 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
...+..|+.+|++.+.+.+ ..|++++++.||++.++.
T Consensus 158 ---------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~ 201 (256)
T TIGR01500 158 ---------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM 201 (256)
T ss_pred ---------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH
Confidence 1234679999999987764 258999999999998875
No 258
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.77 E-value=2.6e-18 Score=146.57 Aligned_cols=165 Identities=17% Similarity=0.151 Sum_probs=112.9
Q ss_pred ccCCCcEEEEEcC--CChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc------------C----CCCeEEEEeeC--
Q 025456 62 VSVKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK------------D----NPSLQIVKADV-- 121 (252)
Q Consensus 62 ~~~~~~~vlVtGa--tG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~------------~----~~~~~~i~~Dl-- 121 (252)
.++++|+++|||| +++||.++++.|+++|++|++ .|+.+++++.... . ......+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 3467999999999 899999999999999999988 6665443221100 0 01246788898
Q ss_pred CCCh-----------------HHHHHHHc------CCCcEEEEcCCCCC----------CCCCCCcceehHHHHHHHHHH
Q 025456 122 TEGS-----------------AKLSEAIG------DDSEAVVCATGFQP----------GWDLFAPWKVDNFGTVNLVEA 168 (252)
Q Consensus 122 ~d~~-----------------~~~~~~~~------~~~d~vi~~ag~~~----------~~~~~~~~~~n~~g~~~ll~~ 168 (252)
++.. +++.+++. +++|++|||||... ..+|+..+++|+.++++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~ 163 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH 163 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 3311 13343332 14999999997421 124566789999999888887
Q ss_pred HHhc--CCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHH-------H-cCCcEEEEeCCcccCCCC
Q 025456 169 CRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 169 ~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~-~gi~~~~lrPg~i~~~~~ 238 (252)
+... .-+++|++||....... + .....|..+|++.+.+.+ + .|++++.|.||.+.++..
T Consensus 164 ~~p~m~~~G~II~isS~a~~~~~------p-----~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~ 232 (303)
T PLN02730 164 FGPIMNPGGASISLTYIASERII------P-----GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAA 232 (303)
T ss_pred HHHHHhcCCEEEEEechhhcCCC------C-----CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchh
Confidence 6321 11699999997432110 0 112469999999987654 2 489999999999999864
No 259
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.77 E-value=3.9e-18 Score=153.64 Aligned_cols=160 Identities=18% Similarity=0.132 Sum_probs=118.4
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh--hhhccccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK--AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
.+++++++||||+|+||.++++.|+++|++|++++|.... ..+... ..+..++.+|++| .+++.+.+..
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 283 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVAN--RVGGTALALDITA-PDAPARIAEHLAERHG 283 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHH--HcCCeEEEEeCCC-HHHHHHHHHHHHHhCC
Confidence 4568999999999999999999999999999999885322 222111 1234678999999 6666655431
Q ss_pred CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHhcC----CCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKRG----VNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 135 ~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~~----~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
++|+||||+|+... .+++..+++|+.++.++.+++.... .++||++||...+... .
T Consensus 284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~------------~ 351 (450)
T PRK08261 284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN------------R 351 (450)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC------------C
Confidence 38999999997542 2345567899999999999986532 2689999997543211 1
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCC
Q 025456 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~ 237 (252)
....|+.+|.+.+.+++ +.|++++++.||.+.++.
T Consensus 352 ~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~ 393 (450)
T PRK08261 352 GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQM 393 (450)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchh
Confidence 24679999997766553 368999999999988764
No 260
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.77 E-value=1.4e-17 Score=146.79 Aligned_cols=159 Identities=18% Similarity=0.253 Sum_probs=116.1
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
++++|+++||||+|+||++++++|+++|++|++++|+.++..........++..+.+|++| .+++.+.+++ +|++|||
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd-~~~v~~~l~~-IDiLInn 252 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ-EAALAELLEK-VDILIIN 252 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC-HHHHHHHhCC-CCEEEEC
Confidence 4568999999999999999999999999999999998765543322122357788999999 8889888888 9999999
Q ss_pred CCCCCC-----CCCCCcceehHHHHHHHHHHHH----hcC----CCEEEEEccceeeccCCCCCCCcchhccchhhHHHH
Q 025456 143 TGFQPG-----WDLFAPWKVDNFGTVNLVEACR----KRG----VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI 209 (252)
Q Consensus 143 ag~~~~-----~~~~~~~~~n~~g~~~ll~~~~----~~~----~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~ 209 (252)
||.... +++++.+++|+.|+.++++++. +.+ .+.+|++|+... . + .....|..
T Consensus 253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-~--------~-----~~~~~Y~A 318 (406)
T PRK07424 253 HGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-N--------P-----AFSPLYEL 318 (406)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-c--------C-----CCchHHHH
Confidence 986532 1345668999999999998873 222 123555554311 0 0 11256999
Q ss_pred HHHHHHHHHH----HcCCcEEEEeCCcccCCC
Q 025456 210 AKLQAEQYIR----KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 210 sK~~~e~~~~----~~gi~~~~lrPg~i~~~~ 237 (252)
+|.+.+.+.. +.++.+..+.||.+.++.
T Consensus 319 SKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~ 350 (406)
T PRK07424 319 SKRALGDLVTLRRLDAPCVVRKLILGPFKSNL 350 (406)
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEeCCCcCCC
Confidence 9999887532 246677788888877654
No 261
>PLN00015 protochlorophyllide reductase
Probab=99.76 E-value=9.3e-18 Score=144.01 Aligned_cols=168 Identities=18% Similarity=0.232 Sum_probs=114.8
Q ss_pred EEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHc------CCCcEE
Q 025456 70 FVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG------DDSEAV 139 (252)
Q Consensus 70 lVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~------~~~d~v 139 (252)
+||||+++||.+++++|+++| ++|++++|+.+..++... ....++.++++|++| .+++.+++. +++|+|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLAS-LDSVRQFVDNFRRSGRPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCC-HHHHHHHHHHHHhcCCCCCEE
Confidence 599999999999999999999 999999998766543221 123467889999999 776665543 148999
Q ss_pred EEcCCCCCC---------CCCCCcceehHHHHHHHHHHH----HhcC--CCEEEEEccceeeccCC-C--CC---C-C--
Q 025456 140 VCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRG--VNRFILISSILVNGAAM-G--QI---L-N-- 195 (252)
Q Consensus 140 i~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~----~~~~--~~~~v~~SS~~v~~~~~-~--~~---~-~-- 195 (252)
|||||+... .+++..+++|+.|++++++.+ ++.+ .++||++||...+-... + .+ . +
T Consensus 80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~ 159 (308)
T PLN00015 80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR 159 (308)
T ss_pred EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence 999997421 123456789999988876665 4443 46999999986531100 0 00 0 0
Q ss_pred --------c------chhccchhhHHHHHHHHHHHHH----HH----cCCcEEEEeCCcc-cCCCC
Q 025456 196 --------P------AYIFLNVFGLTLIAKLQAEQYI----RK----SGINYTIIRPGGL-RNEPP 238 (252)
Q Consensus 196 --------~------~~~~~~~~~~y~~sK~~~e~~~----~~----~gi~~~~lrPg~i-~~~~~ 238 (252)
. .......+..|..+|++.+.+. ++ .|+++++++||++ .++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~ 225 (308)
T PLN00015 160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLF 225 (308)
T ss_pred hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccc
Confidence 0 0011235677999999855432 22 4799999999999 45543
No 262
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.76 E-value=7.6e-18 Score=135.44 Aligned_cols=143 Identities=25% Similarity=0.308 Sum_probs=110.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC--CCcEEEEcCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVCATG 144 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--~~d~vi~~ag 144 (252)
|+++||||+|+||.+++++|+++ ++|++++|+.. .+++|++| .+++++.++. ++|+||||+|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------~~~~D~~~-~~~~~~~~~~~~~id~lv~~ag 64 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------DVQVDITD-PASIRALFEKVGKVDAVVSAAG 64 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------ceEecCCC-hHHHHHHHHhcCCCCEEEECCC
Confidence 47999999999999999999999 99999988642 35789999 7777776653 4999999998
Q ss_pred CCCC--------CCCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHH
Q 025456 145 FQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA 214 (252)
Q Consensus 145 ~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~ 214 (252)
.... .++.+.+++|+.++.++++++... +.++|+++||...... ...+..|+.+|++.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~------------~~~~~~Y~~sK~a~ 132 (199)
T PRK07578 65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP------------IPGGASAATVNGAL 132 (199)
T ss_pred CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC------------CCCchHHHHHHHHH
Confidence 6431 134455789999999999887532 2358999998743211 12246789999988
Q ss_pred HHHHH------HcCCcEEEEeCCcccCCC
Q 025456 215 EQYIR------KSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 215 e~~~~------~~gi~~~~lrPg~i~~~~ 237 (252)
+.+.+ +.|++++.|.||.+.++.
T Consensus 133 ~~~~~~la~e~~~gi~v~~i~Pg~v~t~~ 161 (199)
T PRK07578 133 EGFVKAAALELPRGIRINVVSPTVLTESL 161 (199)
T ss_pred HHHHHHHHHHccCCeEEEEEcCCcccCch
Confidence 87654 358999999999998874
No 263
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.76 E-value=8.3e-18 Score=169.84 Aligned_cols=174 Identities=21% Similarity=0.257 Sum_probs=126.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCC----CeEEEeecCchhhhh---cc----------ccCCCCeEEEEeeCCCC----
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKG----FAVKAGVRDLDKAKT---TL----------SKDNPSLQIVKADVTEG---- 124 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G----~~V~~~~r~~~~~~~---~~----------~~~~~~~~~i~~Dl~d~---- 124 (252)
.++|+|||||||+|.+++++|++++ ++|+++.|..+.... .. .....+++++.+|++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5899999999999999999999887 789999997543211 10 00124789999999862
Q ss_pred -hHHHHHHHcCCCcEEEEcCCCCCCCC-CCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCC-----------
Q 025456 125 -SAKLSEAIGDDSEAVVCATGFQPGWD-LFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMG----------- 191 (252)
Q Consensus 125 -~~~~~~~~~~~~d~vi~~ag~~~~~~-~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~----------- 191 (252)
.+...++..+ +|+|||||+...... .......|+.|+.+++++|++.++++|+|+||.++|+....
T Consensus 1051 ~~~~~~~l~~~-~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443 1051 SDEKWSDLTNE-VDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred CHHHHHHHHhc-CCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhcc
Confidence 3445556666 999999998654322 22333579999999999999988899999999999864210
Q ss_pred -CCCCcch----hccchhhHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCC
Q 025456 192 -QILNPAY----IFLNVFGLTLIAKLQAEQYIRK---SGINYTIIRPGGLRNEPPTG 240 (252)
Q Consensus 192 -~~~~~~~----~~~~~~~~y~~sK~~~e~~~~~---~gi~~~~lrPg~i~~~~~~~ 240 (252)
....+.. ........|+.+|+.+|.++.. .|++++++|||.|+|+...+
T Consensus 1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g 1186 (1389)
T TIGR03443 1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTG 1186 (1389)
T ss_pred CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcC
Confidence 0011110 1122345699999999988753 58999999999999986554
No 264
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.76 E-value=1.2e-17 Score=141.72 Aligned_cols=134 Identities=22% Similarity=0.351 Sum_probs=103.8
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc-----CC-CcEEEE
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-----DD-SEAVVC 141 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~-----~~-~d~vi~ 141 (252)
+|+||||||++|++++++|+++|++|++++|++++.. ..+++.+.+|+.| .+++.+++. .. +|.|+|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~------~~~~~~~~~d~~d-~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA------GPNEKHVKFDWLD-EDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc------CCCCccccccCCC-HHHHHHHHhcccCcCCceeEEEE
Confidence 4899999999999999999999999999999986532 2467778899999 899998883 12 899999
Q ss_pred cCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHc
Q 025456 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS 221 (252)
Q Consensus 142 ~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~ 221 (252)
+++.... ......+++++|+++|+++||++||..++... ..+...|+++++.
T Consensus 74 ~~~~~~~---------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------------------~~~~~~~~~l~~~ 125 (285)
T TIGR03649 74 VAPPIPD---------LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG-------------------PAMGQVHAHLDSL 125 (285)
T ss_pred eCCCCCC---------hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC-------------------chHHHHHHHHHhc
Confidence 9874321 12356789999999999999999987442110 1123346677775
Q ss_pred -CCcEEEEeCCcccCC
Q 025456 222 -GINYTIIRPGGLRNE 236 (252)
Q Consensus 222 -gi~~~~lrPg~i~~~ 236 (252)
|++++++||+++++.
T Consensus 126 ~gi~~tilRp~~f~~~ 141 (285)
T TIGR03649 126 GGVEYTVLRPTWFMEN 141 (285)
T ss_pred cCCCEEEEeccHHhhh
Confidence 999999999988764
No 265
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.76 E-value=4.6e-18 Score=134.69 Aligned_cols=161 Identities=22% Similarity=0.294 Sum_probs=122.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh--cccc--CCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT--TLSK--DNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
.+||++++|||.|+||+++.++|+++|..+.++..+.+..+. .+.. ....+.|+++|+++ ..+++++++.
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~-~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTN-RGDLEAAFDKILATF 81 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEecccc-HHHHHHHHHHHHHHh
Confidence 458999999999999999999999999988887776655442 1211 34578999999999 7667766653
Q ss_pred -CCcEEEEcCCCCCCCCCCCcceehHHH----HHHHHHHHHh-cC--CCEEEEEccceeeccCCCCCCCcchhccchhhH
Q 025456 135 -DSEAVVCATGFQPGWDLFAPWKVDNFG----TVNLVEACRK-RG--VNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (252)
Q Consensus 135 -~~d~vi~~ag~~~~~~~~~~~~~n~~g----~~~ll~~~~~-~~--~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~ 206 (252)
.+|++||+||+..+.||+.++.+|+.| |...+.++.+ .| -+-+|++||.....+ ......
T Consensus 82 g~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P------------~p~~pV 149 (261)
T KOG4169|consen 82 GTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP------------MPVFPV 149 (261)
T ss_pred CceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc------------cccchh
Confidence 499999999999999999999999987 5666777743 32 257999999853211 112356
Q ss_pred HHHHHHHH---------HHHHHHcCCcEEEEeCCcccCCC
Q 025456 207 TLIAKLQA---------EQYIRKSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 207 y~~sK~~~---------e~~~~~~gi~~~~lrPg~i~~~~ 237 (252)
|+++|+.. +.+.++.|++++.+.||.+.+..
T Consensus 150 Y~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l 189 (261)
T KOG4169|consen 150 YAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDL 189 (261)
T ss_pred hhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHH
Confidence 77888733 34566789999999999887753
No 266
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.76 E-value=7.1e-18 Score=133.54 Aligned_cols=173 Identities=21% Similarity=0.328 Sum_probs=122.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHC-CCeEEE-eecCchhhhhcccc---CCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAK-GFAVKA-GVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~-~~r~~~~~~~~~~~---~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
.+.|+||||+.|||..|+++|++. |.++++ ..|++++....+.. .+.++++++.|+++ .+++.+...+
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~-deS~~~~~~~V~~iVg 81 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTC-DESIDNFVQEVEKIVG 81 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEeccc-HHHHHHHHHHHHhhcc
Confidence 467999999999999999999975 666554 45667764332221 46899999999998 4444443321
Q ss_pred --CCcEEEEcCCCCCCC---------CCCCcceehHHHHHHHHHHH----HhcCC-----------CEEEEEccceeecc
Q 025456 135 --DSEAVVCATGFQPGW---------DLFAPWKVDNFGTVNLVEAC----RKRGV-----------NRFILISSILVNGA 188 (252)
Q Consensus 135 --~~d~vi~~ag~~~~~---------~~~~~~~~n~~g~~~ll~~~----~~~~~-----------~~~v~~SS~~v~~~ 188 (252)
.+|++|+|||+.... .|.+.+++|..|+..+.+.+ +++.. ..+|++||.+.-
T Consensus 82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s-- 159 (249)
T KOG1611|consen 82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS-- 159 (249)
T ss_pred cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc--
Confidence 389999999975421 14456899999987777665 33222 268999987532
Q ss_pred CCCCCCCcchhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCCCCceEeeccc
Q 025456 189 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEV 248 (252)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~~~~~~~~~~~ 248 (252)
.+. ....++..|..||.+...+.+ +.++-++.++||+|.|++..++-.+.+|+
T Consensus 160 -~~~------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a~ltvee 219 (249)
T KOG1611|consen 160 -IGG------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKAALTVEE 219 (249)
T ss_pred -cCC------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCcccchhh
Confidence 111 112446889999999988765 35788999999999999987766555543
No 267
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.76 E-value=9.9e-18 Score=139.11 Aligned_cols=161 Identities=24% Similarity=0.389 Sum_probs=124.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccC-CCCeEEEEeeCCCChHHHHHHHc-------C-
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD-NPSLQIVKADVTEGSAKLSEAIG-------D- 134 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~i~~Dl~d~~~~~~~~~~-------~- 134 (252)
...|.|+|||+-.+.|..++++|.++|+.|.+....++..+.+.... .++...++.|+++ +++++++.+ +
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~-~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK-PESVKEAAQWVKKHLGED 105 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCC-HHHHHHHHHHHHHhcccc
Confidence 45799999999999999999999999999999887776666555444 6889999999999 777776653 1
Q ss_pred CCcEEEEcCCCCC---CCC------CCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 DSEAVVCATGFQP---GWD------LFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 ~~d~vi~~ag~~~---~~~------~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
..-.||||||+.. +.+ +...+++|+.|+..+..++ |++. +|+|++||...- . +.
T Consensus 106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR---~---------~~ 172 (322)
T KOG1610|consen 106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGR---V---------AL 172 (322)
T ss_pred cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccC---c---------cC
Confidence 3789999999643 333 4456799999988777776 4544 699999998531 1 11
Q ss_pred chhhHHHHHHHHHHHHH-------HHcCCcEEEEeCCcccCCCC
Q 025456 202 NVFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~-------~~~gi~~~~lrPg~i~~~~~ 238 (252)
...++|..||++.|.+. +.+|++|.+|.||.+.++..
T Consensus 173 p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~ 216 (322)
T KOG1610|consen 173 PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLA 216 (322)
T ss_pred cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccC
Confidence 23578899999999764 35899999999997777654
No 268
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=2.3e-17 Score=128.78 Aligned_cols=160 Identities=14% Similarity=0.197 Sum_probs=120.5
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc---C---CC
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG---D---DS 136 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~---~---~~ 136 (252)
++++-+||||||+.|||.+++++|++.|-+|++..|+..++++... ..+.+....+|+.| .++.++.++ . .+
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~-~~p~~~t~v~Dv~d-~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA-ENPEIHTEVCDVAD-RDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHh-cCcchheeeecccc-hhhHHHHHHHHHhhCCch
Confidence 3468899999999999999999999999999999999988876554 44678888999998 555444332 1 48
Q ss_pred cEEEEcCCCCCCCC----------CCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 137 EAVVCATGFQPGWD----------LFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 137 d~vi~~ag~~~~~~----------~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
+++|||||+....| .++.+.+|+.++.++..++ .+..-.-+|.+||-..+- |..
T Consensus 80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv------------Pm~ 147 (245)
T COG3967 80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV------------PMA 147 (245)
T ss_pred heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC------------ccc
Confidence 99999999876322 2234678999988887776 344445899999964332 223
Q ss_pred hhhHHHHHHHHHHHH-------HHHcCCcEEEEeCCcccCC
Q 025456 203 VFGLTLIAKLQAEQY-------IRKSGINYTIIRPGGLRNE 236 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~-------~~~~gi~~~~lrPg~i~~~ 236 (252)
....|..+|++..-| ++..+++|+-+-|..|.++
T Consensus 148 ~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 148 STPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred ccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 345677888877644 3456899999999998886
No 269
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.74 E-value=1.1e-17 Score=131.16 Aligned_cols=160 Identities=18% Similarity=0.237 Sum_probs=122.1
Q ss_pred CCcEEEEEcCC-ChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc-------CCC
Q 025456 65 KQKKIFVAGAT-GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-------DDS 136 (252)
Q Consensus 65 ~~~~vlVtGat-G~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~-------~~~ 136 (252)
+.++|+|||++ |+||.++++++.+.|+.|++..|+.+...++. ...++...+.|+++ ++.+.+..+ |++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~--~~~gl~~~kLDV~~-~~~V~~v~~evr~~~~Gkl 82 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLA--IQFGLKPYKLDVSK-PEEVVTVSGEVRANPDGKL 82 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHH--HhhCCeeEEeccCC-hHHHHHHHHHHhhCCCCce
Confidence 35888888865 79999999999999999999999987665543 23568999999999 666665543 269
Q ss_pred cEEEEcCCCCC-----C---CCCCCcceehHHHHHHHHHHHHhc---CCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 137 EAVVCATGFQP-----G---WDLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 137 d~vi~~ag~~~-----~---~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
|.++||||..- + .+-+..+++|+.|..++.++.... ..+.||+++|..+|-.. ...+
T Consensus 83 d~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpf------------pf~~ 150 (289)
T KOG1209|consen 83 DLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPF------------PFGS 150 (289)
T ss_pred EEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEecc------------chhh
Confidence 99999999632 1 123456899999988877776421 22689999999776422 2347
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCCC
Q 025456 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~~ 239 (252)
.|.++|++..+|.+ .+|++++.+-+|+|.++-.+
T Consensus 151 iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~ 191 (289)
T KOG1209|consen 151 IYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIAD 191 (289)
T ss_pred hhhHHHHHHHHhhhhcEEeeeccccEEEEecccceeccccc
Confidence 79999999998764 47999999999999886543
No 270
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.74 E-value=3.3e-17 Score=128.14 Aligned_cols=155 Identities=21% Similarity=0.164 Sum_probs=115.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhh------ccccCCCCeEEEEeeCCCChHHHHHHHcC-----
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT------TLSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~------~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~----- 134 (252)
++++||||+|+||.+++++|+++|+ .|+++.|+...... .+.....++.++.+|+++ .+++.+.+..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVAD-RAALAAALAAIPARL 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 5799999999999999999999996 68878887543221 111123567889999998 6666655432
Q ss_pred -CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhh
Q 025456 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 135 -~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~ 205 (252)
++|.|||++|.... .+++..+++|+.++.++++++++.+.+++|++||....-. ...+.
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~------------~~~~~ 147 (180)
T smart00822 80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLG------------NPGQA 147 (180)
T ss_pred CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcC------------CCCch
Confidence 37999999986432 2344568899999999999998878789999998743211 11246
Q ss_pred HHHHHHHHHHHHHH---HcCCcEEEEeCCccc
Q 025456 206 LTLIAKLQAEQYIR---KSGINYTIIRPGGLR 234 (252)
Q Consensus 206 ~y~~sK~~~e~~~~---~~gi~~~~lrPg~i~ 234 (252)
.|..+|.+.+.+.+ ..+++++.+.||.+.
T Consensus 148 ~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 148 NYAAANAFLDALAAHRRARGLPATSINWGAWA 179 (180)
T ss_pred hhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence 78899999888764 468999999998764
No 271
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.74 E-value=3.5e-17 Score=134.89 Aligned_cols=146 Identities=32% Similarity=0.415 Sum_probs=107.9
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhh-hccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCCCCC
Q 025456 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK-TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQP 147 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~ 147 (252)
|+|+||||.+|+.+++.|++.+++|+++.|++++.. +.+. ..+++++.+|+.| .+++.+++.+ +|+||.+.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~--~~g~~vv~~d~~~-~~~l~~al~g-~d~v~~~~~~~~ 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ--ALGAEVVEADYDD-PESLVAALKG-VDAVFSVTPPSH 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH--HTTTEEEES-TT--HHHHHHHHTT-CSEEEEESSCSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh--cccceEeecccCC-HHHHHHHHcC-CceEEeecCcch
Confidence 799999999999999999999999999999985422 2221 2467899999999 8999999999 999999887543
Q ss_pred CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHcCCcEEE
Q 025456 148 GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTI 227 (252)
Q Consensus 148 ~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~~ 227 (252)
..-.....+++++|+++|+++||+.|....+... ....+.......|...|+++++.++++++
T Consensus 77 --------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~---------~~~~p~~~~~~~k~~ie~~l~~~~i~~t~ 139 (233)
T PF05368_consen 77 --------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDES---------SGSEPEIPHFDQKAEIEEYLRESGIPYTI 139 (233)
T ss_dssp --------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTT---------TTSTTHHHHHHHHHHHHHHHHHCTSEBEE
T ss_pred --------hhhhhhhhhHHHhhhccccceEEEEEeccccccc---------ccccccchhhhhhhhhhhhhhhcccccee
Confidence 2235567899999999999999864432211100 00111233446799999999999999999
Q ss_pred EeCCcccC
Q 025456 228 IRPGGLRN 235 (252)
Q Consensus 228 lrPg~i~~ 235 (252)
||||.++.
T Consensus 140 i~~g~f~e 147 (233)
T PF05368_consen 140 IRPGFFME 147 (233)
T ss_dssp EEE-EEHH
T ss_pred ccccchhh
Confidence 99997654
No 272
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.74 E-value=1e-17 Score=130.68 Aligned_cols=140 Identities=18% Similarity=0.253 Sum_probs=107.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecC--chhhhhc---cccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRD--LDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~--~~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
|+++||||+++||++++++|+++| +.|+++.|+ .+...+. ++....++.++++|+++ .+++++.++.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 689999999999999999999995 578888888 3333332 22245789999999999 6666655532
Q ss_pred CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhH
Q 025456 135 DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~ 206 (252)
++|++|||+|..... ++++.+++|+.+..++.+++...+-++||++||..... +...+..
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------~~~~~~~ 147 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVR------------GSPGMSA 147 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTS------------SSTTBHH
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhcc------------CCCCChh
Confidence 499999999976532 34456889999999999999776667999999985321 1233578
Q ss_pred HHHHHHHHHHHHH
Q 025456 207 TLIAKLQAEQYIR 219 (252)
Q Consensus 207 y~~sK~~~e~~~~ 219 (252)
|..+|++.+.+.+
T Consensus 148 Y~askaal~~~~~ 160 (167)
T PF00106_consen 148 YSASKAALRGLTQ 160 (167)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998775
No 273
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.73 E-value=6.2e-17 Score=133.29 Aligned_cols=156 Identities=17% Similarity=0.246 Sum_probs=109.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHH---HcCCCcEEEE
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA---IGDDSEAVVC 141 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~---~~~~~d~vi~ 141 (252)
|+|+||||+||||++++++|+++| +.|....|+.... . ...++.++++|++| .++++++ +++ +|+|||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~--~~~~~~~~~~Dls~-~~~~~~~~~~~~~-id~li~ 73 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---F--QHDNVQWHALDVTD-EAEIKQLSEQFTQ-LDWLIN 73 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---c--ccCceEEEEecCCC-HHHHHHHHHhcCC-CCEEEE
Confidence 589999999999999999999985 5566555644321 1 23578899999999 6666554 345 999999
Q ss_pred cCCCCCCC--------------CCCCcceehHHHHHHHHHHHH----hcCCCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 142 ATGFQPGW--------------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 142 ~ag~~~~~--------------~~~~~~~~n~~g~~~ll~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
|+|..... ++...+++|+.++..+++.+. +.+.++++++||.. +..... +..+
T Consensus 74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~~-------~~~~ 144 (235)
T PRK09009 74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISDN-------RLGG 144 (235)
T ss_pred CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--cccccC-------CCCC
Confidence 99975321 122346889998887777763 33446899998742 111100 1123
Q ss_pred hhHHHHHHHHHHHHHHH---------cCCcEEEEeCCcccCCCC
Q 025456 204 FGLTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~~---------~gi~~~~lrPg~i~~~~~ 238 (252)
+..|+.+|++.+.+.+. .+++++.+.||.+.++..
T Consensus 145 ~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~ 188 (235)
T PRK09009 145 WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALS 188 (235)
T ss_pred cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCC
Confidence 56799999999876641 379999999999988764
No 274
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.73 E-value=2.5e-16 Score=120.93 Aligned_cols=168 Identities=23% Similarity=0.330 Sum_probs=122.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~ 146 (252)
|+|.|.||||-+|++|+++++++||+|++++|++.+.... +++.+++.|+.| .+++.+.+.+ .|+||.+.|..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----~~~~i~q~Difd-~~~~a~~l~g-~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----QGVTILQKDIFD-LTSLASDLAG-HDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----ccceeecccccC-hhhhHhhhcC-CceEEEeccCC
Confidence 6899999999999999999999999999999999876532 568899999999 8888999999 99999988765
Q ss_pred CCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCC-CCCcchhccchhhHHHHHHHHHH--HHHH-HcC
Q 025456 147 PGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQ-ILNPAYIFLNVFGLTLIAKLQAE--QYIR-KSG 222 (252)
Q Consensus 147 ~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~-~~~~~~~~~~~~~~y~~sK~~~e--~~~~-~~g 222 (252)
...+. .........+++..+.+++.|++.++..+..--..+. ..+. |.-|...|..++..+| +.++ +..
T Consensus 74 ~~~~~----~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~---p~fP~ey~~~A~~~ae~L~~Lr~~~~ 146 (211)
T COG2910 74 ASDND----ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDT---PDFPAEYKPEALAQAEFLDSLRAEKS 146 (211)
T ss_pred CCChh----HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecC---CCCchhHHHHHHHHHHHHHHHhhccC
Confidence 32211 2234457788899999999999999876542211111 1111 1112233445566555 3344 356
Q ss_pred CcEEEEeCCcccCCC-CCCceEeeccc
Q 025456 223 INYTIIRPGGLRNEP-PTGNIIMETEV 248 (252)
Q Consensus 223 i~~~~lrPg~i~~~~-~~~~~~~~~~~ 248 (252)
++|+.+.|..++.|+ .+|+|+++.|.
T Consensus 147 l~WTfvSPaa~f~PGerTg~yrlggD~ 173 (211)
T COG2910 147 LDWTFVSPAAFFEPGERTGNYRLGGDQ 173 (211)
T ss_pred cceEEeCcHHhcCCccccCceEeccce
Confidence 999999999888875 46788887654
No 275
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.72 E-value=1.1e-17 Score=127.25 Aligned_cols=165 Identities=15% Similarity=0.132 Sum_probs=129.9
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC--CCcEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV 140 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--~~d~vi 140 (252)
++.|+.|+|||+.-+||++++..|++.|.+|+++.|++..+..+......-+.-+.+|+++ .+.+.+.+.. .+|.++
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~-wea~~~~l~~v~pidgLV 82 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSA-WEALFKLLVPVFPIDGLV 82 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccH-HHHHHHhhcccCchhhhh
Confidence 4568999999999999999999999999999999999988877666444558889999998 7778877765 589999
Q ss_pred EcCCCCC--------CCCCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEccceeeccCCCCCCCcchhccchhhHH
Q 025456 141 CATGFQP--------GWDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (252)
Q Consensus 141 ~~ag~~~--------~~~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y 207 (252)
||||+.. .++.+..|++|+.+..++.+... ..+ .+.||++||.+... +......|
T Consensus 83 NNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R------------~~~nHtvY 150 (245)
T KOG1207|consen 83 NNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR------------PLDNHTVY 150 (245)
T ss_pred ccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc------------ccCCceEE
Confidence 9999743 34677889999999888877743 222 25799999975321 12224667
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCCCC
Q 025456 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG 240 (252)
Q Consensus 208 ~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~~~ 240 (252)
..+|++.+.+.+ ..+|+++.+.|..++++++.+
T Consensus 151 catKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~d 190 (245)
T KOG1207|consen 151 CATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRD 190 (245)
T ss_pred eecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEeccccc
Confidence 888888876554 247999999999999987644
No 276
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.71 E-value=1.8e-16 Score=131.72 Aligned_cols=162 Identities=20% Similarity=0.193 Sum_probs=114.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh--hhhccccCC----CCeEEEEeeCCCChHHHHH-------
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK--AKTTLSKDN----PSLQIVKADVTEGSAKLSE------- 130 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--~~~~~~~~~----~~~~~i~~Dl~d~~~~~~~------- 130 (252)
+++++++||||+++||.++++.|+++|++|+++.|+.+. .+....... ..+.+..+|+++..+++..
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999998888887553 111111111 3577888999961233333
Q ss_pred HHcCCCcEEEEcCCCCCC---------CCCCCcceehHHHHHHHHHHHHhcC-CCEEEEEccceeeccCCCCCCCcchhc
Q 025456 131 AIGDDSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 131 ~~~~~~d~vi~~ag~~~~---------~~~~~~~~~n~~g~~~ll~~~~~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
.+++ +|++|||||.... .+++..+++|+.+...+.+.+...- .++||++||.... ....
T Consensus 83 ~~g~-id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~--------- 151 (251)
T COG1028 83 EFGR-IDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPP--------- 151 (251)
T ss_pred HcCC-CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCC---------
Confidence 3334 9999999997532 2455668999999888888442111 1289999998543 2111
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccCCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~~~~ 238 (252)
.+..|..+|++.+.+.+ +.|++++.|.||.+.++..
T Consensus 152 --~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~ 194 (251)
T COG1028 152 --GQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMT 194 (251)
T ss_pred --CcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcch
Confidence 04789999998876543 3689999999998777654
No 277
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.70 E-value=4.5e-16 Score=127.16 Aligned_cols=159 Identities=23% Similarity=0.220 Sum_probs=124.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhh----hccc---cCCCCeEEEEeeCCCChHHHHHHHcC-CCc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK----TTLS---KDNPSLQIVKADVTEGSAKLSEAIGD-DSE 137 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~----~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d 137 (252)
+|++||||-||+-|++|++.|+++||+|+++.|+.+... .+.. ....+++++.+|++| ...+.+++.. ++|
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD-~~~l~r~l~~v~Pd 80 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTD-SSNLLRILEEVQPD 80 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccc-hHHHHHHHHhcCch
Confidence 689999999999999999999999999999999743221 1111 123458999999999 8888888876 689
Q ss_pred EEEEcCCCCC----CCCCCCcceehHHHHHHHHHHHHhcCC--CEEEEEccceeeccCCCCCCCcchhccchhhHHHHHH
Q 025456 138 AVVCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGV--NRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAK 211 (252)
Q Consensus 138 ~vi~~ag~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~--~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK 211 (252)
-|+|+|+... ..++..+.+++..|+.+++|+++..+. -||...||...||.....|.++ ..|..|.++|+.+|
T Consensus 81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E-~TPFyPrSPYAvAK 159 (345)
T COG1089 81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKE-TTPFYPRSPYAVAK 159 (345)
T ss_pred hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCcccc-CCCCCCCCHHHHHH
Confidence 9999998654 346777889999999999999997653 4899999999999876655554 34677889999999
Q ss_pred HHHHHHH----HHcCCcEE
Q 025456 212 LQAEQYI----RKSGINYT 226 (252)
Q Consensus 212 ~~~e~~~----~~~gi~~~ 226 (252)
..+.-.. +.+|+-.+
T Consensus 160 lYa~W~tvNYResYgl~Ac 178 (345)
T COG1089 160 LYAYWITVNYRESYGLFAC 178 (345)
T ss_pred HHHHheeeehHhhcCceee
Confidence 9887543 34565443
No 278
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.66 E-value=1.9e-15 Score=123.39 Aligned_cols=158 Identities=20% Similarity=0.194 Sum_probs=108.1
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc-CCCcEEEEcCCCCC
Q 025456 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-DDSEAVVCATGFQP 147 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~-~~~d~vi~~ag~~~ 147 (252)
|+||||||+||++|+.+|.+.||+|++++|++.+....+. ..+.. .+.+.+... + +|+|||+||..-
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~---~~v~~--------~~~~~~~~~~~-~DavINLAG~~I 68 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH---PNVTL--------WEGLADALTLG-IDAVINLAGEPI 68 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC---ccccc--------cchhhhcccCC-CCEEEECCCCcc
Confidence 6899999999999999999999999999999876654321 12221 122223333 5 999999999654
Q ss_pred CCC-CC-----CcceehHHHHHHHHHHHHh--cCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHH-H
Q 025456 148 GWD-LF-----APWKVDNFGTVNLVEACRK--RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY-I 218 (252)
Q Consensus 148 ~~~-~~-----~~~~~n~~g~~~ll~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~ 218 (252)
... |. ..++.-+..|..++++..+ .+.+.+|.-|.++.||......+.|...+.+.+..-.+..+.-|.+ +
T Consensus 69 ~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a 148 (297)
T COG1090 69 AERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQA 148 (297)
T ss_pred ccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhh
Confidence 222 22 3345667789999999874 4556778888888899887777666654444444333333332322 2
Q ss_pred HHcCCcEEEEeCCcccCCCC
Q 025456 219 RKSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 219 ~~~gi~~~~lrPg~i~~~~~ 238 (252)
+..|.|++++|.|.|.++.+
T Consensus 149 ~~~gtRvvllRtGvVLs~~G 168 (297)
T COG1090 149 QQLGTRVVLLRTGVVLSPDG 168 (297)
T ss_pred hhcCceEEEEEEEEEecCCC
Confidence 34599999999999888643
No 279
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.66 E-value=2.6e-15 Score=124.64 Aligned_cols=171 Identities=19% Similarity=0.232 Sum_probs=125.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc-----CCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
.++++||||+.+||..++.++..+|++|+++.|+..+..+.... ....+.+..+|+.| -+++...+++
T Consensus 33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~-Y~~v~~~~~~l~~~~~ 111 (331)
T KOG1210|consen 33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVID-YDSVSKVIEELRDLEG 111 (331)
T ss_pred cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEecccccc-HHHHHHHHhhhhhccC
Confidence 37999999999999999999999999999999998877543321 22336788899988 7777766654
Q ss_pred CCcEEEEcCCCCCCC--------CCCCcceehHHHHHHHHHHHH----hcC-CCEEEEEccceeeccCCCCCCCcchhcc
Q 025456 135 DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFL 201 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~--------~~~~~~~~n~~g~~~ll~~~~----~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~~ 201 (252)
.+|.+|+|||..-.. +.+..+++|..|+.+++.++. +.. .++|+.+||... ..+.
T Consensus 112 ~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a------------~~~i 179 (331)
T KOG1210|consen 112 PIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLA------------MLGI 179 (331)
T ss_pred CcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhh------------hcCc
Confidence 489999999975432 233457999999999988873 222 358999998743 1123
Q ss_pred chhhHHHHHHHHHHHHH-------HHcCCcEEEEeCCcccCCCCCCceEeecccc
Q 025456 202 NVFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPTGNIIMETEVR 249 (252)
Q Consensus 202 ~~~~~y~~sK~~~e~~~-------~~~gi~~~~lrPg~i~~~~~~~~~~~~~~~~ 249 (252)
..++.|..+|.+...+. .++++.++..-|+.+.+|+-.......|+.+
T Consensus 180 ~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t 234 (331)
T KOG1210|consen 180 YGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEET 234 (331)
T ss_pred ccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchhe
Confidence 44677777777665433 2369999999999999987555444455544
No 280
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.65 E-value=3.4e-15 Score=124.00 Aligned_cols=162 Identities=20% Similarity=0.215 Sum_probs=121.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc----CCCCeEEEEeeCCCCh---HHHHHHHcC-CC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGS---AKLSEAIGD-DS 136 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~i~~Dl~d~~---~~~~~~~~~-~~ 136 (252)
.+.+++|||||.+||++.+++|+++|.+|++++|+.++++....+ .+-.+.++..|.+++. +.+.+.+.+ ++
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V 127 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV 127 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence 369999999999999999999999999999999999988653322 2356888999999832 235555555 57
Q ss_pred cEEEEcCCCCCCC----------CCCCcceehHHHHHHHHHHH----HhcCCCEEEEEccceeeccCCCCCCCcchhccc
Q 025456 137 EAVVCATGFQPGW----------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (252)
Q Consensus 137 d~vi~~ag~~~~~----------~~~~~~~~n~~g~~~ll~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~ 202 (252)
.++|||+|+..+. .....+.+|+.++..+.+.. .+.+.+-+|++||.+.. .+..
T Consensus 128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~------------~p~p 195 (312)
T KOG1014|consen 128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL------------IPTP 195 (312)
T ss_pred EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc------------ccCh
Confidence 7999999986521 23456789999877766654 45566789999997421 1233
Q ss_pred hhhHHHHHHHHHHHHH-------HHcCCcEEEEeCCcccCCCC
Q 025456 203 VFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~~-------~~~gi~~~~lrPg~i~~~~~ 238 (252)
.++.|.++|...+.+- +.+||.+=.+-|..|.+++.
T Consensus 196 ~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~ 238 (312)
T KOG1014|consen 196 LLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA 238 (312)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence 4688999999665432 34699999999999998874
No 281
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.65 E-value=2.1e-15 Score=128.57 Aligned_cols=164 Identities=19% Similarity=0.198 Sum_probs=103.8
Q ss_pred cCCCcEEEEEcCC--ChHHHHHHHHHHHCCCeEEEeecCc---------hhhh--hcc-ccCCC-----CeEEEEeeCCC
Q 025456 63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDL---------DKAK--TTL-SKDNP-----SLQIVKADVTE 123 (252)
Q Consensus 63 ~~~~~~vlVtGat--G~iG~~l~~~L~~~G~~V~~~~r~~---------~~~~--~~~-~~~~~-----~~~~i~~Dl~d 123 (252)
.+++|+++||||+ .+||+++++.|+++|++|++.++.+ +..+ ... ..... ++..+..|+++
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~ 84 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT 84 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence 3568999999995 9999999999999999999876542 0000 000 00000 01111233322
Q ss_pred C-----------------hHHHHHH-------HcCCCcEEEEcCCCCC----------CCCCCCcceehHHHHHHHHHHH
Q 025456 124 G-----------------SAKLSEA-------IGDDSEAVVCATGFQP----------GWDLFAPWKVDNFGTVNLVEAC 169 (252)
Q Consensus 124 ~-----------------~~~~~~~-------~~~~~d~vi~~ag~~~----------~~~~~~~~~~n~~g~~~ll~~~ 169 (252)
. ..++.+. ++ ++|++|||||... ..+|+..+++|+.|++++++++
T Consensus 85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G-~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~ 163 (299)
T PRK06300 85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFG-HIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF 163 (299)
T ss_pred CEEeecccCccccccCCCHHHHHHHHHHHHHHcC-CCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 1 0123322 23 4999999998532 1235566899999999988887
Q ss_pred Hhc--CCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHH-------H-cCCcEEEEeCCcccCCCC
Q 025456 170 RKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 170 ~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~-~gi~~~~lrPg~i~~~~~ 238 (252)
... .-+++|++||....... + .....|..+|++.+.+.+ + +||+++.|.||.+.++..
T Consensus 164 ~p~m~~~G~ii~iss~~~~~~~------p-----~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~ 231 (299)
T PRK06300 164 GPIMNPGGSTISLTYLASMRAV------P-----GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAG 231 (299)
T ss_pred HHHhhcCCeEEEEeehhhcCcC------C-----CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhh
Confidence 431 12589999886432110 1 111369999999887654 2 489999999999988753
No 282
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.64 E-value=4.1e-16 Score=129.09 Aligned_cols=151 Identities=21% Similarity=0.290 Sum_probs=109.3
Q ss_pred cCC--ChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHH-------H-cCCCcEEE
Q 025456 73 GAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEA-------I-GDDSEAVV 140 (252)
Q Consensus 73 Gat--G~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~-------~-~~~~d~vi 140 (252)
|++ ++||++++++|+++|++|++++|+.++.++.+.. ...+.+++++|++| +++++++ + +. +|++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~g~-iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSD-EESVEALFDEAVERFGGR-IDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTS-HHHHHHHHHHHHHHHCSS-ESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcc-hHHHHHHHHHHHhhcCCC-eEEEE
Confidence 666 9999999999999999999999998874321111 11224479999999 6555544 4 44 99999
Q ss_pred EcCCCCCC----C--------CCCCcceehHHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCcchhccchhhH
Q 025456 141 CATGFQPG----W--------DLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (252)
Q Consensus 141 ~~ag~~~~----~--------~~~~~~~~n~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~ 206 (252)
||+|.... . ++...+++|+.+...+++++.+. .-+++|++||..... +...+..
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~------------~~~~~~~ 146 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR------------PMPGYSA 146 (241)
T ss_dssp EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS------------BSTTTHH
T ss_pred ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc------------cCccchh
Confidence 99987543 1 23445788888888888877321 115899999874221 1223568
Q ss_pred HHHHHHHHHHHHH-------H-cCCcEEEEeCCcccCCC
Q 025456 207 TLIAKLQAEQYIR-------K-SGINYTIIRPGGLRNEP 237 (252)
Q Consensus 207 y~~sK~~~e~~~~-------~-~gi~~~~lrPg~i~~~~ 237 (252)
|..+|.+.+.+.+ + +||++++|.||.+.++.
T Consensus 147 y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~ 185 (241)
T PF13561_consen 147 YSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPM 185 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHH
T ss_pred hHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccc
Confidence 9999999987764 4 79999999999999864
No 283
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.63 E-value=1.2e-14 Score=122.17 Aligned_cols=147 Identities=28% Similarity=0.334 Sum_probs=114.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~ 146 (252)
++|+||||||++|++++++|+++|++|+++.|+++...... .++++..+|+.+ .+.+...+.+ +|.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----~~v~~~~~d~~~-~~~l~~a~~G-~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----GGVEVVLGDLRD-PKSLVAGAKG-VDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----CCcEEEEeccCC-HhHHHHHhcc-ccEEEEEeccc
Confidence 57999999999999999999999999999999998776543 679999999999 8999999999 99999988765
Q ss_pred CCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHcCCcEE
Q 025456 147 PGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYT 226 (252)
Q Consensus 147 ~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ 226 (252)
. .+. ...........+..+.+. .++++++++|...... .....|..+|...|+.+...|++++
T Consensus 75 ~-~~~-~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~--------------~~~~~~~~~~~~~e~~l~~sg~~~t 137 (275)
T COG0702 75 D-GSD-AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADA--------------ASPSALARAKAAVEAALRSSGIPYT 137 (275)
T ss_pred c-ccc-chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCC--------------CCccHHHHHHHHHHHHHHhcCCCeE
Confidence 4 332 233333444444444444 4467888888774221 1236688999999999999999999
Q ss_pred EEeCCcccCC
Q 025456 227 IIRPGGLRNE 236 (252)
Q Consensus 227 ~lrPg~i~~~ 236 (252)
++||..++..
T Consensus 138 ~lr~~~~~~~ 147 (275)
T COG0702 138 TLRRAAFYLG 147 (275)
T ss_pred EEecCeeeec
Confidence 9997665554
No 284
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.63 E-value=1.5e-15 Score=125.80 Aligned_cols=148 Identities=16% Similarity=0.063 Sum_probs=109.3
Q ss_pred HHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC---CCcEEEEcCCCCCCCCCCCcceeh
Q 025456 82 IVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---DSEAVVCATGFQPGWDLFAPWKVD 158 (252)
Q Consensus 82 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~---~~d~vi~~ag~~~~~~~~~~~~~n 158 (252)
++++|+++|++|++++|+.++.. ..+++++|++| .+++.++++. ++|+||||||.....+++..+++|
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~--------~~~~~~~Dl~~-~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN 71 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT--------LDGFIQADLGD-PASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVN 71 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh--------hhHhhcccCCC-HHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhc
Confidence 47899999999999999876431 13567899999 7777777652 499999999987656777889999
Q ss_pred HHHHHHHHHHHHhc--CCCEEEEEccceeeccCCCCCCCc---------c------hhccchhhHHHHHHHHHHHHHH--
Q 025456 159 NFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNP---------A------YIFLNVFGLTLIAKLQAEQYIR-- 219 (252)
Q Consensus 159 ~~g~~~ll~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~---------~------~~~~~~~~~y~~sK~~~e~~~~-- 219 (252)
+.++..+++.+... +.++||++||...|+.....+..+ . ..+......|+.+|++.+.+.+
T Consensus 72 ~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l 151 (241)
T PRK12428 72 FLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQ 151 (241)
T ss_pred hHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHH
Confidence 99999999998643 236999999998765221100000 0 0123345789999999876542
Q ss_pred ------HcCCcEEEEeCCcccCCCC
Q 025456 220 ------KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 220 ------~~gi~~~~lrPg~i~~~~~ 238 (252)
+.|+++++|+||.+.+++.
T Consensus 152 a~~e~~~~girvn~v~PG~v~T~~~ 176 (241)
T PRK12428 152 AQPWFGARGIRVNCVAPGPVFTPIL 176 (241)
T ss_pred HHHhhhccCeEEEEeecCCccCccc
Confidence 3589999999999999864
No 285
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=2.8e-15 Score=118.75 Aligned_cols=155 Identities=18% Similarity=0.157 Sum_probs=120.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCC--eEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCA 142 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ 142 (252)
+++|+|||++|.+|++|++.+.++|. +=+++.-+. .+|+++ .++.++.+.. ++..|||+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-----------------d~DLt~-~a~t~~lF~~ekPthVIhl 62 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-----------------DADLTN-LADTRALFESEKPTHVIHL 62 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-----------------cccccc-hHHHHHHHhccCCceeeeh
Confidence 47999999999999999999999875 222221111 378999 7888888876 79999999
Q ss_pred CCCCC-----CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchh----ccchhhHHHHHHHH
Q 025456 143 TGFQP-----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI----FLNVFGLTLIAKLQ 213 (252)
Q Consensus 143 ag~~~-----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~----~~~~~~~y~~sK~~ 213 (252)
|+... ...+.++++.|+....|++..|-++|++++|+..|.++|.+....|.++... +....-.|..+|.+
T Consensus 63 AAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~ 142 (315)
T KOG1431|consen 63 AAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRM 142 (315)
T ss_pred HhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHH
Confidence 86432 2345577889999999999999999999999999999999888888776542 22333457778866
Q ss_pred HH----HHHHHcCCcEEEEeCCcccCCCC
Q 025456 214 AE----QYIRKSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 214 ~e----~~~~~~gi~~~~lrPg~i~~~~~ 238 (252)
+. .|..++|..++.+-|++++||..
T Consensus 143 idv~n~aY~~qhg~~~tsviPtNvfGphD 171 (315)
T KOG1431|consen 143 IDVQNQAYRQQHGRDYTSVIPTNVFGPHD 171 (315)
T ss_pred HHHHHHHHHHHhCCceeeeccccccCCCC
Confidence 54 34457899999999999999864
No 286
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=99.62 E-value=6.2e-15 Score=129.99 Aligned_cols=172 Identities=21% Similarity=0.234 Sum_probs=120.4
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCC---CeEEEeecCchhhh------hc------------cccCCCCeEEEEeeC
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKG---FAVKAGVRDLDKAK------TT------------LSKDNPSLQIVKADV 121 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~------~~------------~~~~~~~~~~i~~Dl 121 (252)
-.++|+|+|||||||+|.-+++.|++.- -+++++.|.....+ .+ .++...++..+.||+
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 3568999999999999999999999852 26888888653321 00 011235788899999
Q ss_pred CCC-----hHHHHHHHcCCCcEEEEcCCCCCCCC-CCCcceehHHHHHHHHHHHHhcC-CCEEEEEccceeeccC---CC
Q 025456 122 TEG-----SAKLSEAIGDDSEAVVCATGFQPGWD-LFAPWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAA---MG 191 (252)
Q Consensus 122 ~d~-----~~~~~~~~~~~~d~vi~~ag~~~~~~-~~~~~~~n~~g~~~ll~~~~~~~-~~~~v~~SS~~v~~~~---~~ 191 (252)
+++ +.+......+ +|+|||+|+.....+ .+....+|..|+.++++.|++.. .+-+|++|++.+.-.. ..
T Consensus 89 ~~~~LGis~~D~~~l~~e-V~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E 167 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLADE-VNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEE 167 (467)
T ss_pred cCcccCCChHHHHHHHhc-CCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccc
Confidence 884 2445545566 999999998766443 33457899999999999998864 5789999998775111 01
Q ss_pred CCCC------cc------------h-------hccchhhHHHHHHHHHHHHHHH--cCCcEEEEeCCcccC
Q 025456 192 QILN------PA------------Y-------IFLNVFGLTLIAKLQAEQYIRK--SGINYTIIRPGGLRN 235 (252)
Q Consensus 192 ~~~~------~~------------~-------~~~~~~~~y~~sK~~~e~~~~~--~gi~~~~lrPg~i~~ 235 (252)
.++. +. . ......+.|..+|+.+|+++.+ .+++++|+||+.|..
T Consensus 168 ~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~s 238 (467)
T KOG1221|consen 168 KPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITS 238 (467)
T ss_pred cccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceec
Confidence 1110 00 0 0012235688999999999865 589999999987654
No 287
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.61 E-value=6.4e-15 Score=152.45 Aligned_cols=161 Identities=12% Similarity=0.041 Sum_probs=120.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHC-CCeEEEeecCchh--------------h--------------------------
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDK--------------A-------------------------- 103 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~--------------~-------------------------- 103 (252)
++++++||||+++||.+++++|+++ |++|++++|++.. .
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4789999999999999999999998 6999999998210 0
Q ss_pred -------hh---ccccCCCCeEEEEeeCCCChHHHHHHHcC-----CCcEEEEcCCCCCC--------CCCCCcceehHH
Q 025456 104 -------KT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD-----DSEAVVCATGFQPG--------WDLFAPWKVDNF 160 (252)
Q Consensus 104 -------~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-----~~d~vi~~ag~~~~--------~~~~~~~~~n~~ 160 (252)
.+ .+...+..+.++.+|++| .+++.+++.. ++|+||||||+... .++...+++|+.
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD-~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTN-SVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence 00 001123467889999999 7766665542 49999999997542 245567899999
Q ss_pred HHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHH----H-cCCcEEEEeCCcccC
Q 025456 161 GTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR----K-SGINYTIIRPGGLRN 235 (252)
Q Consensus 161 g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~----~-~gi~~~~lrPg~i~~ 235 (252)
|++++++++.....++||++||...+-.. .....|+.+|...+.+.+ + .++++++|.||.+.+
T Consensus 2155 G~~~Ll~al~~~~~~~IV~~SSvag~~G~------------~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813 2155 GLLSLLAALNAENIKLLALFSSAAGFYGN------------TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred HHHHHHHHHHHhCCCeEEEEechhhcCCC------------CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence 99999999987776789999998543111 124678999988776553 2 368999999999887
Q ss_pred CCC
Q 025456 236 EPP 238 (252)
Q Consensus 236 ~~~ 238 (252)
++.
T Consensus 2223 gm~ 2225 (2582)
T TIGR02813 2223 GMV 2225 (2582)
T ss_pred Ccc
Confidence 653
No 288
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.58 E-value=1.1e-15 Score=116.30 Aligned_cols=162 Identities=21% Similarity=0.205 Sum_probs=122.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC------CCc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d 137 (252)
.++...+||||.+++|++.+++|+++|..|++++-..++..+..++...++.+..+|++. ++++..++.. ++|
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvts-ekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTS-EKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCc-HHHHHHHHHHHHhhcccee
Confidence 358899999999999999999999999999999988776655444456789999999999 7777766542 599
Q ss_pred EEEEcCCCCC--------------CCCCCCcceehHHHHHHHHHHHH--------hc-C-CCEEEEEccceeeccCCCCC
Q 025456 138 AVVCATGFQP--------------GWDLFAPWKVDNFGTVNLVEACR--------KR-G-VNRFILISSILVNGAAMGQI 193 (252)
Q Consensus 138 ~vi~~ag~~~--------------~~~~~~~~~~n~~g~~~ll~~~~--------~~-~-~~~~v~~SS~~v~~~~~~~~ 193 (252)
+.+||||+.. .++....+++|+.|++|+++... .+ | -+.+|++.|...+....+
T Consensus 86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g-- 163 (260)
T KOG1199|consen 86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG-- 163 (260)
T ss_pred eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc--
Confidence 9999999743 13566778999999999988752 11 1 246788888876654333
Q ss_pred CCcchhccchhhHHHHHHHHHHH----HHH---HcCCcEEEEeCCcccCCCC
Q 025456 194 LNPAYIFLNVFGLTLIAKLQAEQ----YIR---KSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 194 ~~~~~~~~~~~~~y~~sK~~~e~----~~~---~~gi~~~~lrPg~i~~~~~ 238 (252)
...|..+|.+.-. +.+ ..||+++.|.||.+.+|..
T Consensus 164 ----------qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpll 205 (260)
T KOG1199|consen 164 ----------QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLL 205 (260)
T ss_pred ----------hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhh
Confidence 3567777775432 223 3589999999999888754
No 289
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=99.56 E-value=6.4e-14 Score=107.05 Aligned_cols=157 Identities=23% Similarity=0.279 Sum_probs=122.4
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
..++++.++|.||||-.|+.+++++++++ .+|+++.|+.... +.....+.....|... .++....+.+ +|+.
T Consensus 14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d----~at~k~v~q~~vDf~K-l~~~a~~~qg-~dV~ 87 (238)
T KOG4039|consen 14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD----PATDKVVAQVEVDFSK-LSQLATNEQG-PDVL 87 (238)
T ss_pred HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC----ccccceeeeEEechHH-HHHHHhhhcC-CceE
Confidence 45679999999999999999999999998 4899999884211 1133567777888877 6777888888 9999
Q ss_pred EEcCCCCCC-CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHH
Q 025456 140 VCATGFQPG-WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI 218 (252)
Q Consensus 140 i~~ag~~~~-~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~ 218 (252)
|.|.|.+.. ...+.+++++......+.+++++.|+++|+.+||.++... +.-.|...|...|+-+
T Consensus 88 FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~s--------------SrFlY~k~KGEvE~~v 153 (238)
T KOG4039|consen 88 FCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPS--------------SRFLYMKMKGEVERDV 153 (238)
T ss_pred EEeecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcc--------------cceeeeeccchhhhhh
Confidence 999987663 2356778999999999999999999999999999854211 1234667788888766
Q ss_pred HHcCC-cEEEEeCCcccCCCC
Q 025456 219 RKSGI-NYTIIRPGGLRNEPP 238 (252)
Q Consensus 219 ~~~gi-~~~~lrPg~i~~~~~ 238 (252)
.+.++ +++++|||.+.++..
T Consensus 154 ~eL~F~~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 154 IELDFKHIIILRPGPLLGERT 174 (238)
T ss_pred hhccccEEEEecCcceecccc
Confidence 65443 688999999988654
No 290
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.54 E-value=1.8e-13 Score=108.62 Aligned_cols=152 Identities=23% Similarity=0.247 Sum_probs=103.5
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCch-hh--h---hccccCCCCeEEEEeeCCCChHHHHHHHcC------
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLD-KA--K---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~-~~--~---~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------ 134 (252)
+++||||.|+||..+++.|+++|. +|+++.|+.. .. . +.+......+.++.+|++| .+++.+++..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d-~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTD-PEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTS-HHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccC-HHHHHHHHHHHHhccC
Confidence 689999999999999999999974 7999999832 11 1 1122245679999999999 8888888754
Q ss_pred CCcEEEEcCCCCCCCC--------CCCcceehHHHHHHHHHHHHhcCCCEEEEEcccee-eccCCCCCCCcchhccchhh
Q 025456 135 DSEAVVCATGFQPGWD--------LFAPWKVDNFGTVNLVEACRKRGVNRFILISSILV-NGAAMGQILNPAYIFLNVFG 205 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~~--------~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v-~~~~~~~~~~~~~~~~~~~~ 205 (252)
+++.|||+||...+.. ....+..-+.|+.++.++........||.+||+.. +|.. ...
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~-------------gq~ 147 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP-------------GQS 147 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T-------------TBH
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc-------------chH
Confidence 5899999999754321 22334566788999999998888889999999854 2221 246
Q ss_pred HHHHHHHHHHHHHH---HcCCcEEEEeCCcc
Q 025456 206 LTLIAKLQAEQYIR---KSGINYTIIRPGGL 233 (252)
Q Consensus 206 ~y~~sK~~~e~~~~---~~gi~~~~lrPg~i 233 (252)
.|..+....+.+.+ ..|.++.+|.-|..
T Consensus 148 ~YaaAN~~lda~a~~~~~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 148 AYAAANAFLDALARQRRSRGLPAVSINWGAW 178 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred hHHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence 78888887776653 46899998887644
No 291
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=99.45 E-value=3.8e-13 Score=107.45 Aligned_cols=165 Identities=15% Similarity=0.179 Sum_probs=122.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHC-CCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCA 142 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ 142 (252)
+..+|+|||+-|.+|..+++.|..+ |.+-++++.-....+..+ ..-.++..|+.| ...+++++-+ ++|.+||.
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~----~~GPyIy~DILD-~K~L~eIVVn~RIdWL~Hf 117 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT----DVGPYIYLDILD-QKSLEEIVVNKRIDWLVHF 117 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc----ccCCchhhhhhc-cccHHHhhcccccceeeeH
Confidence 4689999999999999999988876 765443332111111111 233567889999 7888888755 79999997
Q ss_pred CCC---CCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHH-
Q 025456 143 TGF---QPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI- 218 (252)
Q Consensus 143 ag~---~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~- 218 (252)
.+. ..+.+.....++|+.|..|+++.+++++. ++..-|+++++|........+....+.+...|+.+|..+|-+-
T Consensus 118 SALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GE 196 (366)
T KOG2774|consen 118 SALLSAVGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGE 196 (366)
T ss_pred HHHHHHhcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHH
Confidence 543 23456667789999999999999999998 6777899999987765544455556788899999999888543
Q ss_pred ---HHcCCcEEEEeCCcccC
Q 025456 219 ---RKSGINYTIIRPGGLRN 235 (252)
Q Consensus 219 ---~~~gi~~~~lrPg~i~~ 235 (252)
.++|+++.++|...+..
T Consensus 197 y~~hrFg~dfr~~rfPg~is 216 (366)
T KOG2774|consen 197 YFNHRFGVDFRSMRFPGIIS 216 (366)
T ss_pred HHHhhcCccceecccCcccc
Confidence 35799999999766544
No 292
>PRK06720 hypothetical protein; Provisional
Probab=99.43 E-value=2.1e-12 Score=101.11 Aligned_cols=121 Identities=13% Similarity=0.047 Sum_probs=81.0
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhc---cccCCCCeEEEEeeCCCChHHHHHHHc------
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIG------ 133 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~------ 133 (252)
.+++++++||||+++||.++++.|+++|++|++++|+.+..... +........++.+|+++ .+++.+.+.
T Consensus 13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK-QGDWQRVISITLNAF 91 (169)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 35689999999999999999999999999999999886654321 11123457788999999 666655432
Q ss_pred CCCcEEEEcCCCCCCC----C--CCCcceehHHHHHHHHHHH----Hhc-------CCCEEEEEccce
Q 025456 134 DDSEAVVCATGFQPGW----D--LFAPWKVDNFGTVNLVEAC----RKR-------GVNRFILISSIL 184 (252)
Q Consensus 134 ~~~d~vi~~ag~~~~~----~--~~~~~~~n~~g~~~ll~~~----~~~-------~~~~~v~~SS~~ 184 (252)
+++|++|||||..... + .+..-.+|+.++......+ ++. +.+||..+||.+
T Consensus 92 G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (169)
T PRK06720 92 SRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKG 159 (169)
T ss_pred CCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccc
Confidence 1499999999975411 1 0011134555444333333 332 346888888864
No 293
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.40 E-value=3.8e-13 Score=106.89 Aligned_cols=161 Identities=17% Similarity=0.169 Sum_probs=107.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEee--cCchhhhhccccCCCCeEEEEeeCCCChHHHHHHH---c---CCC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGV--RDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI---G---DDS 136 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~--r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~---~---~~~ 136 (252)
+++.++|||+|.+||..++..+.+++.+..... |.....+.+.....+......+|++. ...+.+.. . ++.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e-~~~l~al~e~~r~k~gkr 83 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITE-EQLLGALREAPRKKGGKR 83 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHH-HHHHHHHHhhhhhcCCce
Confidence 468899999999999999999998876543333 33222211111111223334455554 22222222 1 158
Q ss_pred cEEEEcCCCCCC-----------CCCCCcceehHHHHHHHHHHH----HhcC-CCEEEEEccceeeccCCCCCCCcchhc
Q 025456 137 EAVVCATGFQPG-----------WDLFAPWKVDNFGTVNLVEAC----RKRG-VNRFILISSILVNGAAMGQILNPAYIF 200 (252)
Q Consensus 137 d~vi~~ag~~~~-----------~~~~~~~~~n~~g~~~ll~~~----~~~~-~~~~v~~SS~~v~~~~~~~~~~~~~~~ 200 (252)
|.||||||...+ .+|..+|++|+.+...+...+ ++.. .+-+|++||... ..|
T Consensus 84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aa------------v~p 151 (253)
T KOG1204|consen 84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAA------------VRP 151 (253)
T ss_pred eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhh------------hcc
Confidence 999999996431 246678899999977776655 3333 267899999743 234
Q ss_pred cchhhHHHHHHHHHHHHHH-----H-cCCcEEEEeCCcccCCCC
Q 025456 201 LNVFGLTLIAKLQAEQYIR-----K-SGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-----~-~gi~~~~lrPg~i~~~~~ 238 (252)
.+.|+.|..+|++.+.|.+ + .++++..++||.+.|++.
T Consensus 152 ~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq 195 (253)
T KOG1204|consen 152 FSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQ 195 (253)
T ss_pred ccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhH
Confidence 5678999999999988764 3 389999999999999874
No 294
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=99.38 E-value=7.3e-13 Score=105.33 Aligned_cols=163 Identities=20% Similarity=0.174 Sum_probs=122.0
Q ss_pred hcccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 60 ENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 60 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
+..+++-.+.++.|+.||.|.++++.....|+.|.++.|+.. ++.+......+.++.+|... .+-.+..+.+ +..+
T Consensus 46 ~~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~--k~~l~sw~~~vswh~gnsfs-sn~~k~~l~g-~t~v 121 (283)
T KOG4288|consen 46 DKQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENEN--KQTLSSWPTYVSWHRGNSFS-SNPNKLKLSG-PTFV 121 (283)
T ss_pred chhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccC--cchhhCCCcccchhhccccc-cCcchhhhcC-Cccc
Confidence 334445578999999999999999999999999999999865 33333344678888888766 4445566677 8888
Q ss_pred EEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHH-HH
Q 025456 140 VCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQ-YI 218 (252)
Q Consensus 140 i~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~-~~ 218 (252)
+.++|... +...+.++|-....+..++++++|+++|+|+|.... |- +......|..+|.++|. ++
T Consensus 122 ~e~~ggfg--n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~-~~-----------~~~i~rGY~~gKR~AE~Ell 187 (283)
T KOG4288|consen 122 YEMMGGFG--NIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF-GL-----------PPLIPRGYIEGKREAEAELL 187 (283)
T ss_pred HHHhcCcc--chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc-CC-----------CCccchhhhccchHHHHHHH
Confidence 88876432 344566788888999999999999999999996521 10 01112468899999995 45
Q ss_pred HHcCCcEEEEeCCcccCCCCCC
Q 025456 219 RKSGINYTIIRPGGLRNEPPTG 240 (252)
Q Consensus 219 ~~~gi~~~~lrPg~i~~~~~~~ 240 (252)
+.++.+-+++|||++|+...-+
T Consensus 188 ~~~~~rgiilRPGFiyg~R~v~ 209 (283)
T KOG4288|consen 188 KKFRFRGIILRPGFIYGTRNVG 209 (283)
T ss_pred HhcCCCceeeccceeecccccC
Confidence 6688999999999999985433
No 295
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=99.33 E-value=1.6e-11 Score=98.82 Aligned_cols=148 Identities=23% Similarity=0.249 Sum_probs=114.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh-----hhcccc----CCCCeEEEEeeCCCChHHHHHHHcC-C
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-----KTTLSK----DNPSLQIVKADVTEGSAKLSEAIGD-D 135 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-----~~~~~~----~~~~~~~i~~Dl~d~~~~~~~~~~~-~ 135 (252)
.|.+||||-||.=|++|++.|+..||+|.++.|+.+.- +.+... .........+|++| ...+.+++.. +
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTD-ss~L~k~I~~ik 106 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTD-SSCLIKLISTIK 106 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccc-hHHHHHHHhccC
Confidence 57899999999999999999999999999999976432 223221 23567889999999 8888888876 6
Q ss_pred CcEEEEcCCCCC---CCC-CCCcceehHHHHHHHHHHHHhcCC---CEEEEEccceeeccCCCCCCCcchhccchhhHHH
Q 025456 136 SEAVVCATGFQP---GWD-LFAPWKVDNFGTVNLVEACRKRGV---NRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 208 (252)
Q Consensus 136 ~d~vi~~ag~~~---~~~-~~~~~~~n~~g~~~ll~~~~~~~~---~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~ 208 (252)
++-|+|+|+..+ ..| ++-..+++..|+.+++++.+..+. -||...|+...||+....|..+ ..|..|.++|+
T Consensus 107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE-~TPFyPRSPYa 185 (376)
T KOG1372|consen 107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSE-TTPFYPRSPYA 185 (376)
T ss_pred chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCccc-CCCCCCCChhH
Confidence 889999998655 223 334467889999999999987653 2788899999999876655444 34566778999
Q ss_pred HHHHHHH
Q 025456 209 IAKLQAE 215 (252)
Q Consensus 209 ~sK~~~e 215 (252)
++|..+-
T Consensus 186 ~aKmy~~ 192 (376)
T KOG1372|consen 186 AAKMYGY 192 (376)
T ss_pred Hhhhhhe
Confidence 9998763
No 296
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.33 E-value=8e-12 Score=100.87 Aligned_cols=169 Identities=18% Similarity=0.223 Sum_probs=115.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCC-----eEEEeecCchhhhhccc-------cCCCCeEEEEeeCCCChHHHHHHH
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGF-----AVKAGVRDLDKAKTTLS-------KDNPSLQIVKADVTEGSAKLSEAI 132 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~-----~V~~~~r~~~~~~~~~~-------~~~~~~~~i~~Dl~d~~~~~~~~~ 132 (252)
..|.++|||++++||.+|+.+|++... .+++..|+.++.++... ....+++++.+|+++ ..++.++.
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sN-m~Sv~~A~ 80 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSN-MQSVFRAS 80 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhh-HHHHHHHH
Confidence 468999999999999999999998643 47778899887764321 123468899999999 55554443
Q ss_pred cC------CCcEEEEcCCCCCC-----------------------------------CCCCCcceehHHHHHHHHHHHHh
Q 025456 133 GD------DSEAVVCATGFQPG-----------------------------------WDLFAPWKVDNFGTVNLVEACRK 171 (252)
Q Consensus 133 ~~------~~d~vi~~ag~~~~-----------------------------------~~~~~~~~~n~~g~~~ll~~~~~ 171 (252)
.+ ++|.|+.|||.... ++-.+.++.|+.|.+.+++....
T Consensus 81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p 160 (341)
T KOG1478|consen 81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP 160 (341)
T ss_pred HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence 32 39999999987541 12235579999999888877643
Q ss_pred c----CCCEEEEEccceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHH-------HHcCCcEEEEeCCcccCCC
Q 025456 172 R----GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEP 237 (252)
Q Consensus 172 ~----~~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~-------~~~gi~~~~lrPg~i~~~~ 237 (252)
. ....+|++||......... -++....+...+|..||.+.+-+- ++.|+.-.++.||...+..
T Consensus 161 ll~~~~~~~lvwtSS~~a~kk~ls---leD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~ 234 (341)
T KOG1478|consen 161 LLCHSDNPQLVWTSSRMARKKNLS---LEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNS 234 (341)
T ss_pred HhhcCCCCeEEEEeecccccccCC---HHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecch
Confidence 2 2348999999865322211 122222334456778898877432 1347888899999776654
No 297
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.23 E-value=7.2e-11 Score=93.07 Aligned_cols=99 Identities=21% Similarity=0.209 Sum_probs=75.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcC------CCcE
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~------~~d~ 138 (252)
|+++||||||++|. +++.|+++|++|++++|+++..+..... ...++.++.+|++| .+++.+++.+ ++|.
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d-~~sv~~~i~~~l~~~g~id~ 78 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHD-DDALKLAIKSTIEKNGPFDL 78 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCeE
Confidence 47999999987765 9999999999999999987665443221 23468889999999 7777766643 3677
Q ss_pred EEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCC----EEEEEc
Q 025456 139 VVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVN----RFILIS 181 (252)
Q Consensus 139 vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~----~~v~~S 181 (252)
+|+.+ +..++.++.++|++.+++ +|+++=
T Consensus 79 lv~~v--------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~ 111 (177)
T PRK08309 79 AVAWI--------------HSSAKDALSVVCRELDGSSETYRLFHVL 111 (177)
T ss_pred EEEec--------------cccchhhHHHHHHHHccCCCCceEEEEe
Confidence 77554 344688999999999998 888864
No 298
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.15 E-value=1.5e-09 Score=94.31 Aligned_cols=81 Identities=15% Similarity=0.119 Sum_probs=58.3
Q ss_pred CCcEEEEEcCCChHHHH--HHHHHHHCCCeEEEeecCchh---------------hhhccccCCCCeEEEEeeCCCChHH
Q 025456 65 KQKKIFVAGATGSSGKR--IVEQLLAKGFAVKAGVRDLDK---------------AKTTLSKDNPSLQIVKADVTEGSAK 127 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~--l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~~~~~~~i~~Dl~d~~~~ 127 (252)
.+|++|||||++++|.+ +++.| ++|++|+++.+..+. ..+.....+..+..+.+|+++ .++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss-~E~ 117 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS-DEI 117 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC-HHH
Confidence 47999999999999999 89999 999998888753311 111222123346788999999 655
Q ss_pred HHHHHc------CCCcEEEEcCCCCC
Q 025456 128 LSEAIG------DDSEAVVCATGFQP 147 (252)
Q Consensus 128 ~~~~~~------~~~d~vi~~ag~~~ 147 (252)
+.+.+. +++|+||||+|...
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCC
Confidence 554443 14999999998654
No 299
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=99.07 E-value=1.3e-09 Score=94.96 Aligned_cols=98 Identities=24% Similarity=0.329 Sum_probs=79.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
|++|+|.|| |+||+.+++.|+++| .+|++.+|+.++..+.......+++.++.|+.| .+++.+++.+ .|+|||++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-~~al~~li~~-~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-VDALVALIKD-FDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-hHHHHHHHhc-CCEEEEeCC
Confidence 579999998 999999999999998 899999999888776554344589999999999 8999999999 899999987
Q ss_pred CCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEc
Q 025456 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILIS 181 (252)
Q Consensus 145 ~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~S 181 (252)
... ...++++|.++|+ .+|=+|
T Consensus 78 ~~~--------------~~~i~ka~i~~gv-~yvDts 99 (389)
T COG1748 78 PFV--------------DLTILKACIKTGV-DYVDTS 99 (389)
T ss_pred chh--------------hHHHHHHHHHhCC-CEEEcc
Confidence 532 2366777777775 344333
No 300
>PTZ00325 malate dehydrogenase; Provisional
Probab=99.05 E-value=1.4e-09 Score=93.40 Aligned_cols=118 Identities=16% Similarity=0.074 Sum_probs=88.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhh-ccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKT-TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~-~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
.+|++|.|+|++|.||+.++..|+.++ +++++++++....+. .+.+... .....+.+| ..++.+.+.+ .|+||
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~--~~~v~~~td-~~~~~~~l~g-aDvVV 81 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDT--PAKVTGYAD-GELWEKALRG-ADLVL 81 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCc--CceEEEecC-CCchHHHhCC-CCEEE
Confidence 358899999999999999999998655 689999883221111 1111111 233446666 4555778899 99999
Q ss_pred EcCCCCCC--CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEcccee
Q 025456 141 CATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILV 185 (252)
Q Consensus 141 ~~ag~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v 185 (252)
+++|.... .++.+.+..|+..+.++++++++++.+++|+++|.-+
T Consensus 82 itaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPv 128 (321)
T PTZ00325 82 ICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV 128 (321)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence 99997543 4566778899999999999999999999999999754
No 301
>PLN00106 malate dehydrogenase
Probab=98.89 E-value=1.2e-08 Score=87.78 Aligned_cols=115 Identities=15% Similarity=0.077 Sum_probs=85.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~a 143 (252)
..+|.|+|++|.||..++..|+.++ .+++++++++.... .++-.+........++++ .+++.+.+.+ +|+|||+|
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~-a~Dl~~~~~~~~i~~~~~-~~d~~~~l~~-aDiVVitA 94 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV-AADVSHINTPAQVRGFLG-DDQLGDALKG-ADLVIIPA 94 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee-EchhhhCCcCceEEEEeC-CCCHHHHcCC-CCEEEEeC
Confidence 4799999999999999999998766 47999988762111 111011111222335444 4557788999 99999999
Q ss_pred CCCCC--CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 144 GFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 144 g~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
|.... .++.+.+..|.....++.+.+++++...+|+++|.
T Consensus 95 G~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSN 136 (323)
T PLN00106 95 GVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISN 136 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 97553 46667788999999999999999998889888885
No 302
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=98.89 E-value=4.1e-08 Score=78.59 Aligned_cols=159 Identities=16% Similarity=0.261 Sum_probs=98.0
Q ss_pred cCCCcEEEEEcCCC--hHHHHHHHHHHHCCCeEEEeecCchhhhhcc---ccCCCCeEEEEeeCCCChHHHHHHHcC---
Q 025456 63 SVKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (252)
Q Consensus 63 ~~~~~~vlVtGatG--~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~--- 134 (252)
.++||+++|+|-.. .|+-.|++.|.++|.++......+ +.++.. ........++++|+++ .+++++.+..
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~-d~~i~~~f~~i~~ 80 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTN-DESIDALFATIKK 80 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCC-HHHHHHHHHHHHH
Confidence 46799999999754 899999999999999998877665 333211 1122235678999999 6666655542
Q ss_pred ---CCcEEEEcCCCCCCCCCC-CcceehH--------HHHHHHHHHHHhcC-----CCEEEEEccceeeccCCCCCCCcc
Q 025456 135 ---DSEAVVCATGFQPGWDLF-APWKVDN--------FGTVNLVEACRKRG-----VNRFILISSILVNGAAMGQILNPA 197 (252)
Q Consensus 135 ---~~d~vi~~ag~~~~~~~~-~~~~~n~--------~g~~~ll~~~~~~~-----~~~~v~~SS~~v~~~~~~~~~~~~ 197 (252)
++|.|||+.+..+..+.. .++++.- .++..++..+++.. -+.+|-.+=. | ..
T Consensus 81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYl---g-s~------- 149 (259)
T COG0623 81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYL---G-SE------- 149 (259)
T ss_pred hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEec---c-ce-------
Confidence 499999999876621100 1111111 12344444444321 2345544321 1 10
Q ss_pred hhccchhhHHHHHHHHHHHHHH-------HcCCcEEEEeCCcccC
Q 025456 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRN 235 (252)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~~~lrPg~i~~ 235 (252)
.....|+.-+.+|++.|.-+| +.|+|++.|.-|.|.+
T Consensus 150 -r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrT 193 (259)
T COG0623 150 -RVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRT 193 (259)
T ss_pred -eecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHH
Confidence 011124566789999986443 3689999999998866
No 303
>PRK09620 hypothetical protein; Provisional
Probab=98.83 E-value=1.4e-08 Score=83.26 Aligned_cols=81 Identities=21% Similarity=0.281 Sum_probs=55.0
Q ss_pred CCcEEEEEcCC----------------ChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHH
Q 025456 65 KQKKIFVAGAT----------------GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128 (252)
Q Consensus 65 ~~~~vlVtGat----------------G~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~ 128 (252)
++++|+||+|. ||+|++|+++|+++|++|+++++.......... ....+..+..|... .+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~-~~~~~~~V~s~~d~-~~~l 79 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN-NQLELHPFEGIIDL-QDKM 79 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC-CceeEEEEecHHHH-HHHH
Confidence 58999999886 999999999999999999988764321111111 11223334443322 3567
Q ss_pred HHHHcC-CCcEEEEcCCCCC
Q 025456 129 SEAIGD-DSEAVVCATGFQP 147 (252)
Q Consensus 129 ~~~~~~-~~d~vi~~ag~~~ 147 (252)
.+.+.. ++|+|||+|++..
T Consensus 80 ~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 80 KSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HHHhcccCCCEEEECccccc
Confidence 777752 4899999999754
No 304
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.81 E-value=2.7e-08 Score=81.75 Aligned_cols=75 Identities=20% Similarity=0.273 Sum_probs=52.2
Q ss_pred EEEEE-cCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC-hHHHHHHHcCCCcEEEEcCCC
Q 025456 68 KIFVA-GATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAKLSEAIGDDSEAVVCATGF 145 (252)
Q Consensus 68 ~vlVt-GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~-~~~~~~~~~~~~d~vi~~ag~ 145 (252)
.=.|| .+||++|++|+++|+++|++|+++.|+..... . ...+++++.++..+. .+.+.+.+.+ +|+||||||+
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~--~~~~v~~i~v~s~~~m~~~l~~~~~~-~DivIh~AAv 91 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--E--PHPNLSIIEIENVDDLLETLEPLVKD-HDVLIHSMAV 91 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--C--CCCCeEEEEEecHHHHHHHHHHHhcC-CCEEEeCCcc
Confidence 33445 56788999999999999999999987643211 0 124577777654331 2456666777 9999999998
Q ss_pred CC
Q 025456 146 QP 147 (252)
Q Consensus 146 ~~ 147 (252)
..
T Consensus 92 sd 93 (229)
T PRK06732 92 SD 93 (229)
T ss_pred CC
Confidence 64
No 305
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.80 E-value=4.6e-08 Score=86.62 Aligned_cols=93 Identities=28% Similarity=0.434 Sum_probs=69.1
Q ss_pred EEEEcCCChHHHHHHHHHHHCC-C-eEEEeecCchhhhhcccc-CCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCCC
Q 025456 69 IFVAGATGSSGKRIVEQLLAKG-F-AVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF 145 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G-~-~V~~~~r~~~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~ 145 (252)
|+|.|| |++|+.+++.|++++ . +|++.+|+.++.++.... ...++..+++|+.| .+++.+.+.+ .|+||||+|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~-~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-PESLAELLRG-CDVVINCAGP 77 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-HHHHHHHHTT-SSEEEE-SSG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-HHHHHHHHhc-CCEEEECCcc
Confidence 789999 999999999999986 4 899999999987766543 45789999999999 8889999999 9999999985
Q ss_pred CCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEE
Q 025456 146 QPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFIL 179 (252)
Q Consensus 146 ~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~ 179 (252)
.. ...++++|.+.|+ ++|-
T Consensus 78 ~~--------------~~~v~~~~i~~g~-~yvD 96 (386)
T PF03435_consen 78 FF--------------GEPVARACIEAGV-HYVD 96 (386)
T ss_dssp GG--------------HHHHHHHHHHHT--EEEE
T ss_pred ch--------------hHHHHHHHHHhCC-Ceec
Confidence 41 2355566666554 4444
No 306
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.78 E-value=3.4e-08 Score=85.27 Aligned_cols=114 Identities=11% Similarity=0.039 Sum_probs=75.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCC-------CeEEEeecCchh--hhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCc
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKG-------FAVKAGVRDLDK--AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSE 137 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~--~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d 137 (252)
.+|+||||+|++|++++..|+..+ ++|+++++++.. .+....+..+-......|+.. ..++.+.+.+ +|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~-~~~~~~~l~~-aD 80 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVA-TTDPEEAFKD-VD 80 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCcee-cCCHHHHhCC-CC
Confidence 579999999999999999998844 589999986532 111000000000011224433 3456678888 99
Q ss_pred EEEEcCCCCCC--CCCCCcceehHHHHHHHHHHHHhcC-C-CEEEEEcc
Q 025456 138 AVVCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRG-V-NRFILISS 182 (252)
Q Consensus 138 ~vi~~ag~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~-~-~~~v~~SS 182 (252)
+|||+||.... .+..+.++.|+.-...+.+.++++. . ..+|.+|.
T Consensus 81 iVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 81 VAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred EEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 99999998653 3445678899988889988887773 2 34555553
No 307
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.73 E-value=7.2e-08 Score=77.22 Aligned_cols=81 Identities=25% Similarity=0.277 Sum_probs=64.0
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccC--CCCeEEEEeeCCCChHHHHHHHcCCCcEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD--NPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
++++++++|+||+|++|+.+++.|+++|++|+++.|+.++.+...... ..+..+...|..+ .+++.+.+.+ .|+||
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~-~diVi 102 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-DAARAAAIKG-ADVVF 102 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-HHHHHHHHhc-CCEEE
Confidence 346899999999999999999999999999999999987665432211 1245566778888 7888888988 99999
Q ss_pred EcCCC
Q 025456 141 CATGF 145 (252)
Q Consensus 141 ~~ag~ 145 (252)
++...
T Consensus 103 ~at~~ 107 (194)
T cd01078 103 AAGAA 107 (194)
T ss_pred ECCCC
Confidence 97653
No 308
>PRK05086 malate dehydrogenase; Provisional
Probab=98.66 E-value=2e-07 Score=80.08 Aligned_cols=113 Identities=19% Similarity=0.156 Sum_probs=78.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHH-C--CCeEEEeecCchhhhhccccCC-CCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 67 KKIFVAGATGSSGKRIVEQLLA-K--GFAVKAGVRDLDKAKTTLSKDN-PSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~-~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
|+++|+||+|.+|++++..|.. . ++++++++|++......++-.+ .....+.+ .+ .+++.+.+.+ +|+||.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~-~~d~~~~l~~-~DiVIit 76 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FS-GEDPTPALEG-ADVVLIS 76 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eC-CCCHHHHcCC-CCEEEEc
Confidence 6899999999999999988855 2 4578888876432100011011 11122333 22 2345667788 9999999
Q ss_pred CCCCCC--CCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 143 TGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 143 ag~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
+|.... .+..+.+..|......+++.+++.+.+++|.+.|.
T Consensus 77 aG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN 119 (312)
T PRK05086 77 AGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN 119 (312)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 997543 34456678899999999999999998888888874
No 309
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.66 E-value=1.1e-07 Score=84.13 Aligned_cols=77 Identities=12% Similarity=0.250 Sum_probs=58.3
Q ss_pred ccCCCcEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCCh
Q 025456 62 VSVKQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS 125 (252)
Q Consensus 62 ~~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~ 125 (252)
..+++++|+|||| +|++|.+++++|+++|++|++++++.+ .. ...+ +...|+++ .
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~~~~--~~~~dv~~-~ 254 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----TPAG--VKRIDVES-A 254 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----CCCC--cEEEccCC-H
Confidence 4578999999999 888999999999999999999988653 11 1112 34578888 6
Q ss_pred HHHHHHHcC---CCcEEEEcCCCCC
Q 025456 126 AKLSEAIGD---DSEAVVCATGFQP 147 (252)
Q Consensus 126 ~~~~~~~~~---~~d~vi~~ag~~~ 147 (252)
+++.+.+.. ++|++|||||+..
T Consensus 255 ~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 255 QEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHHHHHHHhcCCCCEEEEcccccc
Confidence 555555432 3999999999754
No 310
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.56 E-value=6e-07 Score=74.77 Aligned_cols=74 Identities=18% Similarity=0.202 Sum_probs=56.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF 145 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ag~ 145 (252)
|+|+|+||||. |+.|++.|.++|++|++..+.....+.... .+..-+..+..| .+++.+.+.+ ++|+||+++..
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~---~g~~~v~~g~l~-~~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI---HQALTVHTGALD-PQELREFLKRHSIDILVDATHP 75 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc---cCCceEEECCCC-HHHHHHHHHhcCCCEEEEcCCH
Confidence 58999999999 999999999999999999988764433221 223334566667 6778788765 59999998754
No 311
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.45 E-value=9.5e-07 Score=75.18 Aligned_cols=79 Identities=28% Similarity=0.300 Sum_probs=60.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCe-EEEeecCc---hhhhhccc---cCCCCeEEEEeeCCCChHHHHHHHcCCC
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDL---DKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGDDS 136 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~---~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 136 (252)
+++++++|+|| |++|++++..|++.|++ |+++.|+. ++.+++.. .....+.+...|+.+ .+++.+.+.. .
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~-~~~~~~~~~~-~ 200 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLND-TEKLKAEIAS-S 200 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhh-hhHHHhhhcc-C
Confidence 46789999999 89999999999999986 99999986 44433221 122345566788887 6777777877 9
Q ss_pred cEEEEcCCC
Q 025456 137 EAVVCATGF 145 (252)
Q Consensus 137 d~vi~~ag~ 145 (252)
|+||||..+
T Consensus 201 DilINaTp~ 209 (289)
T PRK12548 201 DILVNATLV 209 (289)
T ss_pred CEEEEeCCC
Confidence 999998743
No 312
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=98.44 E-value=6.6e-07 Score=76.06 Aligned_cols=79 Identities=29% Similarity=0.397 Sum_probs=65.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHH----CCCeEEEeecCchhhhhcccc-------CCCCeEEEEeeCCCChHHHHHHHcCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLA----KGFAVKAGVRDLDKAKTTLSK-------DNPSLQIVKADVTEGSAKLSEAIGDD 135 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~----~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~i~~Dl~d~~~~~~~~~~~~ 135 (252)
--++|.|||||-|..++++++. .|...-+..|++.++.+.+.. ......++.+|..| ++++.+....
T Consensus 6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n-~~Sl~emak~- 83 (423)
T KOG2733|consen 6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSAN-EASLDEMAKQ- 83 (423)
T ss_pred eeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCC-HHHHHHHHhh-
Confidence 4689999999999999999999 688888899999888764431 11233488899999 8999999988
Q ss_pred CcEEEEcCCCCC
Q 025456 136 SEAVVCATGFQP 147 (252)
Q Consensus 136 ~d~vi~~ag~~~ 147 (252)
..+|+||+|+..
T Consensus 84 ~~vivN~vGPyR 95 (423)
T KOG2733|consen 84 ARVIVNCVGPYR 95 (423)
T ss_pred hEEEEeccccce
Confidence 999999999754
No 313
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.35 E-value=4.7e-06 Score=71.92 Aligned_cols=104 Identities=13% Similarity=0.156 Sum_probs=73.4
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCC-------eEEEeecCchhhhhccccCCCCeEEEEeeCCCCh----------HHHHH
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS----------AKLSE 130 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~----------~~~~~ 130 (252)
+|.|+||+|.+|..++..|+..|. ++++++++... +..+....|+.|.. ....+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~---------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~ 72 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM---------KALEGVVMELQDCAFPLLKGVVITTDPEE 72 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc---------CccceeeeehhhhcccccCCcEEecChHH
Confidence 789999999999999999987652 48888886520 12233344444410 34567
Q ss_pred HHcCCCcEEEEcCCCCC--CCCCCCcceehHHHHHHHHHHHHhcC-CC-EEEEEc
Q 025456 131 AIGDDSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRG-VN-RFILIS 181 (252)
Q Consensus 131 ~~~~~~d~vi~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~-~~-~~v~~S 181 (252)
.+.+ +|+|||+||... ..+..+.+..|..-.+.+.+.+++.. .. .+|.+|
T Consensus 73 ~~~~-aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 73 AFKD-VDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred HhCC-CCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 7888 999999999754 23455667889998999999998873 43 455554
No 314
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.34 E-value=1.5e-06 Score=74.93 Aligned_cols=74 Identities=22% Similarity=0.328 Sum_probs=55.1
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHC-C-CeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAK-G-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
++++++|+||||+|+||+.++++|+++ | .+++++.|+..+...+.. ++..+|+. .+.+.+.+ +|+||
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~------el~~~~i~----~l~~~l~~-aDiVv 220 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA------ELGGGKIL----SLEEALPE-ADIVV 220 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH------HhccccHH----hHHHHHcc-CCEEE
Confidence 467899999999999999999999865 5 589999998766554321 11123333 35678888 99999
Q ss_pred EcCCCCC
Q 025456 141 CATGFQP 147 (252)
Q Consensus 141 ~~ag~~~ 147 (252)
|+++...
T Consensus 221 ~~ts~~~ 227 (340)
T PRK14982 221 WVASMPK 227 (340)
T ss_pred ECCcCCc
Confidence 9998643
No 315
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.34 E-value=3.5e-06 Score=74.33 Aligned_cols=103 Identities=13% Similarity=0.188 Sum_probs=70.7
Q ss_pred ccCCCcEEEEEcC---------------C-ChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCCh
Q 025456 62 VSVKQKKIFVAGA---------------T-GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS 125 (252)
Q Consensus 62 ~~~~~~~vlVtGa---------------t-G~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~ 125 (252)
..+++++++|||| | |.+|.+++++|..+|++|+++.++.... . ...+ ...|+.+ .
T Consensus 181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~---~~~~--~~~~v~~-~ 251 (390)
T TIGR00521 181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---T---PPGV--KSIKVST-A 251 (390)
T ss_pred cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---C---CCCc--EEEEecc-H
Confidence 3478999999999 3 4599999999999999999988765321 1 1222 4578877 5
Q ss_pred HHH-HHHHc---CCCcEEEEcCCCCCCCC----------CCCcceehHHHHHHHHHHHHhcC
Q 025456 126 AKL-SEAIG---DDSEAVVCATGFQPGWD----------LFAPWKVDNFGTVNLVEACRKRG 173 (252)
Q Consensus 126 ~~~-~~~~~---~~~d~vi~~ag~~~~~~----------~~~~~~~n~~g~~~ll~~~~~~~ 173 (252)
+++ .+.++ +++|++|+|||+..... ....+.+|+.-+..+++..++..
T Consensus 252 ~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~ 313 (390)
T TIGR00521 252 EEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK 313 (390)
T ss_pred HHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence 555 33331 13899999999864211 12234577777778888877644
No 316
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.29 E-value=5.7e-06 Score=71.41 Aligned_cols=104 Identities=12% Similarity=0.071 Sum_probs=73.8
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCC-------eEEEeecCchhhhhccccCCCCeEEEEeeCCCCh----------HHHHH
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS----------AKLSE 130 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~----------~~~~~ 130 (252)
+|.|+|++|.+|..++..|+..|. ++++++++++.. ..+....|+.|.. ....+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~ 71 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------VLEGVVMELMDCAFPLLDGVVPTHDPAV 71 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------ccceeEeehhcccchhcCceeccCChHH
Confidence 589999999999999999987553 588888765421 1333345555521 13456
Q ss_pred HHcCCCcEEEEcCCCCCC--CCCCCcceehHHHHHHHHHHHHhcC-C-CEEEEEc
Q 025456 131 AIGDDSEAVVCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRG-V-NRFILIS 181 (252)
Q Consensus 131 ~~~~~~d~vi~~ag~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~-~-~~~v~~S 181 (252)
.+.+ +|+||++||.... .++.+.+..|+.-...+.+.++++. . ..+|.+|
T Consensus 72 ~~~~-aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs 125 (324)
T TIGR01758 72 AFTD-VDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG 125 (324)
T ss_pred HhCC-CCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 7788 9999999997653 3456677899999999999998873 4 3555555
No 317
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=98.29 E-value=1.2e-05 Score=65.88 Aligned_cols=74 Identities=36% Similarity=0.529 Sum_probs=61.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHH-HcCCCcEEEEcCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG 144 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-~~~~~d~vi~~ag 144 (252)
|+++|.|+ |-+|+.+++.|.++|++|++++++++...+... .......+.+|-+| ++.++++ +.+ +|++|-+.|
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~-~~~~~~~v~gd~t~-~~~L~~agi~~-aD~vva~t~ 75 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLA-DELDTHVVIGDATD-EDVLEEAGIDD-ADAVVAATG 75 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh-hhcceEEEEecCCC-HHHHHhcCCCc-CCEEEEeeC
Confidence 57888997 999999999999999999999999887665332 23568899999999 8888877 555 999997765
No 318
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.26 E-value=1.8e-06 Score=70.82 Aligned_cols=69 Identities=17% Similarity=0.266 Sum_probs=46.1
Q ss_pred EEEEEc-CCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHH-------HcCCCcEE
Q 025456 68 KIFVAG-ATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-------IGDDSEAV 139 (252)
Q Consensus 68 ~vlVtG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-------~~~~~d~v 139 (252)
.=.||. ++|+||++++++|+++|++|+++++... .. . . . ...+|+.+ .+++.+. ++. +|++
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~---~-~-~---~~~~Dv~d-~~s~~~l~~~v~~~~g~-iDiL 84 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK---P-E-P---HPNLSIRE-IETTKDLLITLKELVQE-HDIL 84 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc---c-c-c---CCcceeec-HHHHHHHHHHHHHHcCC-CCEE
Confidence 334454 4889999999999999999998876321 11 0 0 1 13467777 4444433 344 9999
Q ss_pred EEcCCCCC
Q 025456 140 VCATGFQP 147 (252)
Q Consensus 140 i~~ag~~~ 147 (252)
|||||+..
T Consensus 85 VnnAgv~d 92 (227)
T TIGR02114 85 IHSMAVSD 92 (227)
T ss_pred EECCEecc
Confidence 99999754
No 319
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.20 E-value=3.9e-06 Score=63.19 Aligned_cols=76 Identities=22% Similarity=0.365 Sum_probs=56.3
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCe-EEEeecCchhhhhccccC-CCCeEEEEeeCCCChHHHHHHHcCCCcEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKD-NPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~-~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
++++++++|.|+ |+.|+.++..|++.|.+ |+++.|+.++.+++.... ...+.++ ++.+ +.+.+.. .|+||
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~--~~~~----~~~~~~~-~DivI 80 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAI--PLED----LEEALQE-ADIVI 80 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEE--EGGG----HCHHHHT-ESEEE
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCcccccee--eHHH----HHHHHhh-CCeEE
Confidence 457899999997 99999999999999975 999999988876654322 2234443 3333 4466777 99999
Q ss_pred EcCCCC
Q 025456 141 CATGFQ 146 (252)
Q Consensus 141 ~~ag~~ 146 (252)
++.+..
T Consensus 81 ~aT~~~ 86 (135)
T PF01488_consen 81 NATPSG 86 (135)
T ss_dssp E-SSTT
T ss_pred EecCCC
Confidence 998754
No 320
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.13 E-value=1.1e-05 Score=69.58 Aligned_cols=157 Identities=11% Similarity=0.072 Sum_probs=95.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCC-------eEEEeecCchh--hhhcc---ccCC----CCeEEEEeeCCCChHHHHH
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLDK--AKTTL---SKDN----PSLQIVKADVTEGSAKLSE 130 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~~--~~~~~---~~~~----~~~~~i~~Dl~d~~~~~~~ 130 (252)
++|.|+|++|.+|..++-.|+..|. ++++++...+. ++... .+.. .++.+ +. ...+
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~~---~~~~ 74 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-----TD---DPNV 74 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-----ec---CcHH
Confidence 6999999999999999999998774 68888875432 22110 0000 11111 11 1235
Q ss_pred HHcCCCcEEEEcCCCCC--CCCCCCcceehHHHHHHHHHHHHhcCC-C-EEEEEccce---eeccCCCCCCCcchhc-cc
Q 025456 131 AIGDDSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGV-N-RFILISSIL---VNGAAMGQILNPAYIF-LN 202 (252)
Q Consensus 131 ~~~~~~d~vi~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~-~-~~v~~SS~~---v~~~~~~~~~~~~~~~-~~ 202 (252)
.+.+ .|+||.+||... ..+..+.+..|..-...+.+.+++.+. . .+|.+|--. .|-- -...+ ..
T Consensus 75 ~~~d-aDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~-------~k~sg~~p 146 (322)
T cd01338 75 AFKD-ADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA-------MKNAPDIP 146 (322)
T ss_pred HhCC-CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH-------HHHcCCCC
Confidence 6777 999999999754 334556678899889999999987762 3 455555310 0000 00000 11
Q ss_pred hhhHHHHHHHHHHHH----HHHcCCcEEEEeCCcccCCCCC
Q 025456 203 VFGLTLIAKLQAEQY----IRKSGINYTIIRPGGLRNEPPT 239 (252)
Q Consensus 203 ~~~~y~~sK~~~e~~----~~~~gi~~~~lrPg~i~~~~~~ 239 (252)
+...|+.++...+++ .+..|++...++...|+|+...
T Consensus 147 ~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~ 187 (322)
T cd01338 147 PDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP 187 (322)
T ss_pred hHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence 223444555554433 2457888888888788887754
No 321
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=98.12 E-value=1.6e-05 Score=60.27 Aligned_cols=106 Identities=20% Similarity=0.236 Sum_probs=72.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhhcc---cc----CCCCeEEEEeeCCCChHHHHHHHcCCCc
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTL---SK----DNPSLQIVKADVTEGSAKLSEAIGDDSE 137 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~---~~----~~~~~~~i~~Dl~d~~~~~~~~~~~~~d 137 (252)
++|.|+|++|.+|++++-.|+..+ .++++++++.+..+... .+ ......+.. .+ .+.+.+ .|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~-----~~~~~~-aD 71 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GD-----YEALKD-AD 71 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SS-----GGGGTT-ES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cc-----cccccc-cc
Confidence 589999999999999999999886 58999999876543211 10 111222222 12 234667 99
Q ss_pred EEEEcCCCCC--CCCCCCcceehHHHHHHHHHHHHhcCCC-EEEEEc
Q 025456 138 AVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (252)
Q Consensus 138 ~vi~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~S 181 (252)
+||.++|... ..+..+.+..|..-...+.+.+++.+.. .++.+|
T Consensus 72 ivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 72 IVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp EEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred EEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 9999999754 3344566788888899999998887643 444443
No 322
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=98.06 E-value=2e-05 Score=62.45 Aligned_cols=76 Identities=16% Similarity=0.307 Sum_probs=48.3
Q ss_pred CCcEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCC-ChHH
Q 025456 65 KQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE-GSAK 127 (252)
Q Consensus 65 ~~~~vlVtGa----------------tG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d-~~~~ 127 (252)
++++||||+| ||..|.+|+++++.+|++|+++..... .. ...++..+.++=.+ ..+.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~-----~p~~~~~i~v~sa~em~~~ 75 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP-----PPPGVKVIRVESAEEMLEA 75 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----------TTEEEEE-SSHHHHHHH
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc-----ccccceEEEecchhhhhhh
Confidence 4677777765 799999999999999999999887632 11 12467777765332 1245
Q ss_pred HHHHHcCCCcEEEEcCCCCC
Q 025456 128 LSEAIGDDSEAVVCATGFQP 147 (252)
Q Consensus 128 ~~~~~~~~~d~vi~~ag~~~ 147 (252)
+.+.+.. .|++|++|++..
T Consensus 76 ~~~~~~~-~Di~I~aAAVsD 94 (185)
T PF04127_consen 76 VKELLPS-ADIIIMAAAVSD 94 (185)
T ss_dssp HHHHGGG-GSEEEE-SB--S
T ss_pred hccccCc-ceeEEEecchhh
Confidence 5566666 899999999865
No 323
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=98.04 E-value=8.7e-05 Score=64.51 Aligned_cols=108 Identities=22% Similarity=0.299 Sum_probs=71.4
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchh---------------------hh---hccccC--CCCe
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---------------------AK---TTLSKD--NPSL 114 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~---------------------~~---~~~~~~--~~~~ 114 (252)
..+++++|+|.|+ |++|.++++.|++.|. ++++++++.-. .+ +.+... .-++
T Consensus 20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i 98 (338)
T PRK12475 20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI 98 (338)
T ss_pred HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence 3456789999997 8999999999999997 78888886411 00 111111 2234
Q ss_pred EEEEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeec
Q 025456 115 QIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNG 187 (252)
Q Consensus 115 ~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~ 187 (252)
+.+..|++. +.+.+.+.+ +|+||.+.. |...-..+-+.|++.++ .+|+.+..+.+|
T Consensus 99 ~~~~~~~~~--~~~~~~~~~-~DlVid~~D-------------~~~~r~~in~~~~~~~i-p~i~~~~~g~~G 154 (338)
T PRK12475 99 VPVVTDVTV--EELEELVKE-VDLIIDATD-------------NFDTRLLINDLSQKYNI-PWIYGGCVGSYG 154 (338)
T ss_pred EEEeccCCH--HHHHHHhcC-CCEEEEcCC-------------CHHHHHHHHHHHHHcCC-CEEEEEecccEE
Confidence 556666653 557778888 999998863 22233456677888887 567766554433
No 324
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=98.03 E-value=0.00011 Score=71.92 Aligned_cols=77 Identities=22% Similarity=0.284 Sum_probs=61.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCC-Ce-------------EEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHH
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKG-FA-------------VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSE 130 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~ 130 (252)
.+++|+|.|+ |++|+.+++.|++.+ ++ |.+.+++.+..++... ..++++.++.|+.| .+++.+
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~-~~~~~~~v~lDv~D-~e~L~~ 644 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVE-GIENAEAVQLDVSD-SESLLK 644 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHH-hcCCCceEEeecCC-HHHHHH
Confidence 4789999997 999999999998753 33 7777887766654433 22367889999999 888999
Q ss_pred HHcCCCcEEEEcCCC
Q 025456 131 AIGDDSEAVVCATGF 145 (252)
Q Consensus 131 ~~~~~~d~vi~~ag~ 145 (252)
.+.+ +|+||++...
T Consensus 645 ~v~~-~DaVIsalP~ 658 (1042)
T PLN02819 645 YVSQ-VDVVISLLPA 658 (1042)
T ss_pred hhcC-CCEEEECCCc
Confidence 9998 9999999864
No 325
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.99 E-value=0.00014 Score=63.18 Aligned_cols=108 Identities=23% Similarity=0.311 Sum_probs=73.6
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhh---------------------h---hccccCCC--Ce
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKA---------------------K---TTLSKDNP--SL 114 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~---------------------~---~~~~~~~~--~~ 114 (252)
..++..+|+|.|+ |++|.++++.|++.|. ++++++++.-.. + +.+....+ ++
T Consensus 20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v 98 (339)
T PRK07688 20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV 98 (339)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence 3456789999998 9999999999999997 888888763110 0 01111122 34
Q ss_pred EEEEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeec
Q 025456 115 QIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNG 187 (252)
Q Consensus 115 ~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~ 187 (252)
+.+..+++. +.+.+.+.+ .|+||.+.. |...-..+-++|.+.++ .+|+.++.+.||
T Consensus 99 ~~~~~~~~~--~~~~~~~~~-~DlVid~~D-------------n~~~r~~ln~~~~~~~i-P~i~~~~~g~~G 154 (339)
T PRK07688 99 EAIVQDVTA--EELEELVTG-VDLIIDATD-------------NFETRFIVNDAAQKYGI-PWIYGACVGSYG 154 (339)
T ss_pred EEEeccCCH--HHHHHHHcC-CCEEEEcCC-------------CHHHHHHHHHHHHHhCC-CEEEEeeeeeee
Confidence 555556643 556777888 999998853 33345567788888886 677877666544
No 326
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.98 E-value=3.6e-05 Score=67.90 Aligned_cols=101 Identities=20% Similarity=0.310 Sum_probs=65.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHC-CCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHH-HHHcCCCcEEEEc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLS-EAIGDDSEAVVCA 142 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~-~~~~~~~d~vi~~ 142 (252)
+.++|.|.||||++|+.+++.|+++ ..+|..+.++....+.... . ...+...|+.+ .++++ +.+.+ +|+||.+
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~-~--~~~l~~~~~~~-~~~~~~~~~~~-~DvVf~A 111 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGS-V--FPHLITQDLPN-LVAVKDADFSD-VDAVFCC 111 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchh-h--CccccCccccc-eecCCHHHhcC-CCEEEEc
Confidence 4679999999999999999999998 5789988876543322111 1 11222234432 22222 22567 9999998
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceee
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVN 186 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~ 186 (252)
.+.. ....++..+ +.+ .++|-.|+..-+
T Consensus 112 lp~~--------------~s~~i~~~~-~~g-~~VIDlSs~fRl 139 (381)
T PLN02968 112 LPHG--------------TTQEIIKAL-PKD-LKIVDLSADFRL 139 (381)
T ss_pred CCHH--------------HHHHHHHHH-hCC-CEEEEcCchhcc
Confidence 7631 456677776 356 489999987643
No 327
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.98 E-value=5.1e-05 Score=68.60 Aligned_cols=75 Identities=25% Similarity=0.325 Sum_probs=54.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCch-hhhhcccc-CCCCeEEEEeeCCCChHHHHHHHcCCCcEEEE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~ 141 (252)
+++|+|+|+|+++ +|..+++.|+++|++|++.+++.. ..++.... ...+++++..|..+ +...+ +|+||+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~-~d~vv~ 74 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE------EFLEG-VDLVVV 74 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch------hHhhc-CCEEEE
Confidence 4589999999866 999999999999999999998752 22211110 12356777777765 23456 999999
Q ss_pred cCCCC
Q 025456 142 ATGFQ 146 (252)
Q Consensus 142 ~ag~~ 146 (252)
++|..
T Consensus 75 ~~g~~ 79 (450)
T PRK14106 75 SPGVP 79 (450)
T ss_pred CCCCC
Confidence 99874
No 328
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.95 E-value=1.9e-05 Score=66.82 Aligned_cols=78 Identities=21% Similarity=0.253 Sum_probs=61.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCCC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF 145 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~ 145 (252)
-..++|-||+||.|..++++|+.+|.+-.+..|+..++..+-...++.... .++-+ ++.+.+...+ ..+|+||+|+
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~--~p~~~-p~~~~~~~~~-~~VVlncvGP 81 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAV--FPLGV-PAALEAMASR-TQVVLNCVGP 81 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccc--cCCCC-HHHHHHHHhc-ceEEEecccc
Confidence 367899999999999999999999998888899998877544323333443 34444 7788888888 9999999997
Q ss_pred CC
Q 025456 146 QP 147 (252)
Q Consensus 146 ~~ 147 (252)
..
T Consensus 82 yt 83 (382)
T COG3268 82 YT 83 (382)
T ss_pred cc
Confidence 54
No 329
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.92 E-value=0.0002 Score=57.71 Aligned_cols=107 Identities=19% Similarity=0.225 Sum_probs=69.6
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchh-------------------hh---hccccCCCCe--EE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK-------------------AK---TTLSKDNPSL--QI 116 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-------------------~~---~~~~~~~~~~--~~ 116 (252)
..++..+|+|.|+ |++|.++++.|+..|. ++++++++.-. .+ +.+....+.+ +.
T Consensus 17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 95 (202)
T TIGR02356 17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA 95 (202)
T ss_pred HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence 3456899999996 9999999999999996 78888876211 00 0111122333 33
Q ss_pred EEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceee
Q 025456 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVN 186 (252)
Q Consensus 117 i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~ 186 (252)
+..++. .+.+.+.+.+ .|+||.+.. |...-..+-+.|++.++ .+|+.+..+.+
T Consensus 96 ~~~~i~--~~~~~~~~~~-~D~Vi~~~d-------------~~~~r~~l~~~~~~~~i-p~i~~~~~g~~ 148 (202)
T TIGR02356 96 LKERVT--AENLELLINN-VDLVLDCTD-------------NFATRYLINDACVALGT-PLISAAVVGFG 148 (202)
T ss_pred ehhcCC--HHHHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEeccCe
Confidence 333443 3556777888 999998863 23334567788888886 57777655443
No 330
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.90 E-value=0.00015 Score=63.05 Aligned_cols=93 Identities=18% Similarity=0.192 Sum_probs=58.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCC---eEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
+++|+|.||||++|+++++.|.++|+ ++..+.++.+..+.. . . .+.++...|+.+ . .+.+ +|+||.+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l-~-~-~g~~i~v~d~~~-~-----~~~~-vDvVf~A 70 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKEL-S-F-KGKELKVEDLTT-F-----DFSG-VDIALFS 70 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCee-e-e-CCceeEEeeCCH-H-----HHcC-CCEEEEC
Confidence 46899999999999999999999876 457777665433322 1 1 123344445543 1 2357 9999988
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
+|.. .+..+.+...++|+ ++|=.|+.
T Consensus 71 ~g~g--------------~s~~~~~~~~~~G~-~VIDlS~~ 96 (334)
T PRK14874 71 AGGS--------------VSKKYAPKAAAAGA-VVIDNSSA 96 (334)
T ss_pred CChH--------------HHHHHHHHHHhCCC-EEEECCch
Confidence 8632 23445555555665 55555553
No 331
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.85 E-value=7.5e-05 Score=64.19 Aligned_cols=110 Identities=13% Similarity=0.170 Sum_probs=70.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCC--eEEEeecCc--hhhhhccccC-C----CCeEEEEeeCCCChHHHHHHHcCCCc
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDL--DKAKTTLSKD-N----PSLQIVKADVTEGSAKLSEAIGDDSE 137 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~--~~~~~~~~~~-~----~~~~~i~~Dl~d~~~~~~~~~~~~~d 137 (252)
++|.|+|++|.+|..++..|+..|. +|++++|+. ++++...... + .... .....++ + . +.+.+ .|
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~--d-~-~~l~~-aD 74 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISS--D-L-SDVAG-SD 74 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECC--C-H-HHhCC-CC
Confidence 5899999999999999999999986 599999854 2222111000 0 0011 0122222 1 2 34778 99
Q ss_pred EEEEcCCCCCC--CCCCCcceehHHHHHHHHHHHHhcCC-CEEEEEcc
Q 025456 138 AVVCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGV-NRFILISS 182 (252)
Q Consensus 138 ~vi~~ag~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~v~~SS 182 (252)
+||.++|.... .+..+.+..|..-...+.+.+++... .++|.+++
T Consensus 75 iViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 75 IVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 99999997543 23345567788888888888876643 35666665
No 332
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.84 E-value=0.0002 Score=64.73 Aligned_cols=73 Identities=22% Similarity=0.299 Sum_probs=59.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHH-HcCCCcEEEEcCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG 144 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-~~~~~d~vi~~ag 144 (252)
|+|+|+|+ |.+|+++++.|.++|++|++++++++..+.... ..++.++.+|.++ .+.+.++ +.+ +|.||.+..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~--~~~~~~~~gd~~~-~~~l~~~~~~~-a~~vi~~~~ 74 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD--RLDVRTVVGNGSS-PDVLREAGAED-ADLLIAVTD 74 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh--hcCEEEEEeCCCC-HHHHHHcCCCc-CCEEEEecC
Confidence 47999997 999999999999999999999998876654321 2468899999998 7777777 666 999987754
No 333
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.83 E-value=4.9e-05 Score=65.29 Aligned_cols=105 Identities=18% Similarity=0.217 Sum_probs=71.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhhccccC-------CCCeEEEEeeCCCChHHHHHHHcCCCc
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKD-------NPSLQIVKADVTEGSAKLSEAIGDDSE 137 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~~-------~~~~~~i~~Dl~d~~~~~~~~~~~~~d 137 (252)
++|.|.|+ |++|+.++..|+..| ++|++++|++++.+....+. .....+.. .+ . +.+.+ .|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~-~----~~l~~-aD 70 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GD-Y----SDCKD-AD 70 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CC-H----HHhCC-CC
Confidence 47899996 999999999999998 58999999887654322110 11222221 12 2 23567 99
Q ss_pred EEEEcCCCCC--CCCCCCcceehHHHHHHHHHHHHhcCCC-EEEEEc
Q 025456 138 AVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (252)
Q Consensus 138 ~vi~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~S 181 (252)
+||+++|... ..+..+.+..|..-...+.+.+++.+.. .++.+|
T Consensus 71 IVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs 117 (306)
T cd05291 71 IVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS 117 (306)
T ss_pred EEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 9999999754 2344566778888888888888877643 455555
No 334
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.76 E-value=0.00069 Score=50.86 Aligned_cols=103 Identities=20% Similarity=0.360 Sum_probs=67.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhh----------------------ccccCCC--CeEEEEee
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSKDNP--SLQIVKAD 120 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~----------------------~~~~~~~--~~~~i~~D 120 (252)
.++|+|.|+ |++|+++++.|+..|. ++++++.+.=.... .+....+ +++.+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 479999997 9999999999999997 68887765311110 0110112 34455555
Q ss_pred CCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceee
Q 025456 121 VTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVN 186 (252)
Q Consensus 121 l~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~ 186 (252)
+. .+...+.+++ +|+||.+.. |...-..+.+.|++.+. .+|+.+..+.+
T Consensus 81 ~~--~~~~~~~~~~-~d~vi~~~d-------------~~~~~~~l~~~~~~~~~-p~i~~~~~g~~ 129 (135)
T PF00899_consen 81 ID--EENIEELLKD-YDIVIDCVD-------------SLAARLLLNEICREYGI-PFIDAGVNGFY 129 (135)
T ss_dssp CS--HHHHHHHHHT-SSEEEEESS-------------SHHHHHHHHHHHHHTT--EEEEEEEETTE
T ss_pred cc--cccccccccC-CCEEEEecC-------------CHHHHHHHHHHHHHcCC-CEEEEEeecCE
Confidence 52 4667777888 999998864 23445677788999886 78887765433
No 335
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.75 E-value=0.00011 Score=63.20 Aligned_cols=107 Identities=19% Similarity=0.224 Sum_probs=73.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCC--eEEEeecCchhhhhcc---ccC---CCCeEEEEeeCCCChHHHHHHHcCCC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTL---SKD---NPSLQIVKADVTEGSAKLSEAIGDDS 136 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~---~~~---~~~~~~i~~Dl~d~~~~~~~~~~~~~ 136 (252)
.+++|.|+|+ |.+|..++-.|+..|. ++.+++++.+..+... .+. ..++.+. . .+ .+.+.+ .
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~-----~~~~~~-a 74 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GD-----YSDCKD-A 74 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CC-----HHHhCC-C
Confidence 5789999998 9999999999998886 7999998776543211 111 1122222 1 11 234678 9
Q ss_pred cEEEEcCCCCC--CCCCCCcceehHHHHHHHHHHHHhcCCC-EEEEEc
Q 025456 137 EAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (252)
Q Consensus 137 d~vi~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~S 181 (252)
|+||.++|... ..+..+.+..|..-.+.+++.+++.+.. .++.+|
T Consensus 75 divIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 75 DLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred CEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 99999999754 2345566788888888888888876643 445544
No 336
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.73 E-value=0.0011 Score=48.82 Aligned_cols=94 Identities=19% Similarity=0.255 Sum_probs=55.1
Q ss_pred EEEEEcCCChHHHHHHHHHHHCC-CeEEEe-ecCchhhhh---ccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKG-FAVKAG-VRDLDKAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G-~~V~~~-~r~~~~~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
+|.|+||||++|+.+++.|+++. ++++.+ .++.+..+. ..+..........-| .+ .+ .+.+ +|+||.|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~-~~----~~~~-~Dvvf~a 73 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-AD-PE----ELSD-VDVVFLA 73 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TS-GH----HHTT-ESEEEE-
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cc-hh----Hhhc-CCEEEec
Confidence 68999999999999999999974 465544 444422221 111001111222222 23 22 3466 9999999
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
.+- .....+.+.+.+.|+ ++|=.|+.
T Consensus 74 ~~~--------------~~~~~~~~~~~~~g~-~ViD~s~~ 99 (121)
T PF01118_consen 74 LPH--------------GASKELAPKLLKAGI-KVIDLSGD 99 (121)
T ss_dssp SCH--------------HHHHHHHHHHHHTTS-EEEESSST
T ss_pred Cch--------------hHHHHHHHHHhhCCc-EEEeCCHH
Confidence 752 234566677777887 66666654
No 337
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.71 E-value=0.00076 Score=55.82 Aligned_cols=104 Identities=21% Similarity=0.247 Sum_probs=65.1
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhc----------------------cccCCCCeEEEEe
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSKDNPSLQIVKA 119 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~i~~ 119 (252)
.+++.+|+|.|+ |++|.++++.|++.|. ++++++.+.-....+ +....+.+++...
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~ 99 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI 99 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence 456789999997 9999999999999995 677777653221110 0011233333332
Q ss_pred --eCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 120 --DVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 120 --Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
.++ .+.+.+.+.+ .|+||.+.. |...-..+-++|.+.++ .+|+.++.+
T Consensus 100 ~~~i~--~~~~~~~~~~-~DlVvd~~D-------------~~~~r~~ln~~~~~~~i-p~v~~~~~g 149 (240)
T TIGR02355 100 NAKLD--DAELAALIAE-HDIVVDCTD-------------NVEVRNQLNRQCFAAKV-PLVSGAAIR 149 (240)
T ss_pred eccCC--HHHHHHHhhc-CCEEEEcCC-------------CHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence 232 3456667777 898888764 22334556688888886 566655443
No 338
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.71 E-value=0.00079 Score=48.90 Aligned_cols=92 Identities=26% Similarity=0.349 Sum_probs=65.0
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHH-HcCCCcEEEEcCCCCC
Q 025456 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATGFQP 147 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-~~~~~d~vi~~ag~~~ 147 (252)
|+|.|. |-+|..+++.|.+.+.+|+++.++++..+.... .++.++.+|.+| .+.++++ +.+ .+.||-+..
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~---~~~~~i~gd~~~-~~~l~~a~i~~-a~~vv~~~~--- 71 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE---EGVEVIYGDATD-PEVLERAGIEK-ADAVVILTD--- 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH---TTSEEEES-TTS-HHHHHHTTGGC-ESEEEEESS---
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh---cccccccccchh-hhHHhhcCccc-cCEEEEccC---
Confidence 578887 799999999999977799999999887665443 458899999999 7777765 344 888887654
Q ss_pred CCCCCCcceehHHHHHHHHHHHHhcC-CCEEEE
Q 025456 148 GWDLFAPWKVDNFGTVNLVEACRKRG-VNRFIL 179 (252)
Q Consensus 148 ~~~~~~~~~~n~~g~~~ll~~~~~~~-~~~~v~ 179 (252)
|-.....++..+++.+ ..+++.
T Consensus 72 ----------~d~~n~~~~~~~r~~~~~~~ii~ 94 (116)
T PF02254_consen 72 ----------DDEENLLIALLARELNPDIRIIA 94 (116)
T ss_dssp ----------SHHHHHHHHHHHHHHTTTSEEEE
T ss_pred ----------CHHHHHHHHHHHHHHCCCCeEEE
Confidence 1223445666677643 345554
No 339
>PRK05442 malate dehydrogenase; Provisional
Probab=97.70 E-value=0.0003 Score=60.79 Aligned_cols=107 Identities=11% Similarity=0.074 Sum_probs=71.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCC-------eEEEeecCchh--hhhc---cccC----CCCeEEEEeeCCCChHHHH
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLDK--AKTT---LSKD----NPSLQIVKADVTEGSAKLS 129 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~~--~~~~---~~~~----~~~~~~i~~Dl~d~~~~~~ 129 (252)
.++|.|+|++|.+|..++-.|+..|. ++++++.+++. ++.. +.+. ..++.+ + ....
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~---~~~y 75 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----T---DDPN 75 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----e---cChH
Confidence 57999999999999999999988663 68888875432 2111 0000 011111 1 1123
Q ss_pred HHHcCCCcEEEEcCCCCC--CCCCCCcceehHHHHHHHHHHHHhcC--CCEEEEEc
Q 025456 130 EAIGDDSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRG--VNRFILIS 181 (252)
Q Consensus 130 ~~~~~~~d~vi~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~--~~~~v~~S 181 (252)
+.+.+ .|+||.+||... ..+..+.+..|..-...+.+.+++.. -..++.+|
T Consensus 76 ~~~~d-aDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 76 VAFKD-ADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred HHhCC-CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 56777 999999999644 34555667889988999999998843 34566665
No 340
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.69 E-value=0.00056 Score=61.84 Aligned_cols=102 Identities=22% Similarity=0.371 Sum_probs=71.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHH-HcCCCcEEEEc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCA 142 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-~~~~~d~vi~~ 142 (252)
..+++++|.|+ |.+|+.+++.|.+.|++|++++++++..+.... ...++.++.+|.++ .+.+.++ +.+ .|+||-+
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~-~~~~~~~i~gd~~~-~~~L~~~~~~~-a~~vi~~ 304 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE-ELPNTLVLHGDGTD-QELLEEEGIDE-ADAFIAL 304 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH-HCCCCeEEECCCCC-HHHHHhcCCcc-CCEEEEC
Confidence 34689999998 999999999999999999999999876654332 22467889999998 6766544 344 8988865
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEcc
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS 182 (252)
..- + ..|+. +...+++.+..+++....
T Consensus 305 ~~~----~-----~~n~~----~~~~~~~~~~~~ii~~~~ 331 (453)
T PRK09496 305 TND----D-----EANIL----SSLLAKRLGAKKVIALVN 331 (453)
T ss_pred CCC----c-----HHHHH----HHHHHHHhCCCeEEEEEC
Confidence 431 1 23443 233455556656555443
No 341
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.69 E-value=0.00028 Score=61.59 Aligned_cols=99 Identities=18% Similarity=0.205 Sum_probs=60.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHC-CCeEEEeecCchhhhhccccCCCCeEEE-EeeCCCChHHHHHHHcCCCcEEEEcC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIV-KADVTEGSAKLSEAIGDDSEAVVCAT 143 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~i-~~Dl~d~~~~~~~~~~~~~d~vi~~a 143 (252)
|++|+|+||||++|+.+++.|++. +++++.+.++.+..+.... ....+..+ ..++.+ .+.. ...+ +|+||.|.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~-~~~~~~~~~~~~~~~-~~~~--~~~~-vD~Vf~al 76 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSD-VHPHLRGLVDLVLEP-LDPE--ILAG-ADVVFLAL 76 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHH-hCcccccccCceeec-CCHH--HhcC-CCEEEECC
Confidence 589999999999999999999987 6788777664332211110 11112111 122333 2222 3456 99999887
Q ss_pred CCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 144 GFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 144 g~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
... ....++..+.++|+ ++|=.|+..
T Consensus 77 P~~--------------~~~~~v~~a~~aG~-~VID~S~~f 102 (343)
T PRK00436 77 PHG--------------VSMDLAPQLLEAGV-KVIDLSADF 102 (343)
T ss_pred CcH--------------HHHHHHHHHHhCCC-EEEECCccc
Confidence 531 23456666666774 777777654
No 342
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.67 E-value=6.7e-05 Score=72.63 Aligned_cols=155 Identities=17% Similarity=0.211 Sum_probs=100.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCe-EEEeecCchhh--hh----ccccCCCCeEEEEeeCCCChHHHHHHHcC----
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKA--KT----TLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~--~~----~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~---- 134 (252)
.|.++|+||-|+.|.++++.|..+|.+ +++.+|+.-+. .. .....+-++.+-..|++. .....+.+..
T Consensus 1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt-~~ga~~Li~~s~kl 1846 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITT-AEGARGLIEESNKL 1846 (2376)
T ss_pred cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchh-hhhHHHHHHHhhhc
Confidence 589999999999999999999999975 66667764221 11 111123344555566766 4445555543
Q ss_pred -CCcEEEEcCCCCCC--------CCCCCcceehHHHHHHHHHHHHhcC--CCEEEEEccceeeccCCCCCCCcchhccch
Q 025456 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYIFLNV 203 (252)
Q Consensus 135 -~~d~vi~~ag~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~~--~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~ 203 (252)
.+..|||.|.+-.+ .++.+.-+.-+.||.|+=+..++.- .+.||..||+..-....+
T Consensus 1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~G------------ 1914 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAG------------ 1914 (2376)
T ss_pred ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCc------------
Confidence 37789999876442 2223333444556777766666653 468999999865322222
Q ss_pred hhHHHHHHHHHHHHHHH---cCCcEEEEeCCcc
Q 025456 204 FGLTLIAKLQAEQYIRK---SGINYTIIRPGGL 233 (252)
Q Consensus 204 ~~~y~~sK~~~e~~~~~---~gi~~~~lrPg~i 233 (252)
..+|+.+..++|++.++ +|++-+.|.=|.|
T Consensus 1915 QtNYG~aNS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1915 QTNYGLANSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred ccccchhhHHHHHHHHHhhhcCCCcceeeeecc
Confidence 36788888899988753 5777777776654
No 343
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.67 E-value=0.00027 Score=60.67 Aligned_cols=109 Identities=19% Similarity=0.157 Sum_probs=72.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhhc---cccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEE
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~ 141 (252)
++|.|+|++|.+|++++-.|+.+| .++++++.+ ..+.. +.+......+.... . .+++.+.+.+ .|+||.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~-~~~~y~~~~d-aDivvi 74 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--G-PEELKKALKG-ADVVVI 74 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--C-CCchHHhcCC-CCEEEE
Confidence 489999999999999999998887 478888876 22111 11011111222110 1 1235567888 999999
Q ss_pred cCCCCC--CCCCCCcceehHHHHHHHHHHHHhcCCC-EEEEEc
Q 025456 142 ATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (252)
Q Consensus 142 ~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~S 181 (252)
+||... ..+..+.++.|..-...+.+..++.+.. .+|.+|
T Consensus 75 taG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvt 117 (310)
T cd01337 75 PAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIIS 117 (310)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 999754 3455567788998899999988877653 455555
No 344
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.64 E-value=0.00018 Score=55.12 Aligned_cols=75 Identities=21% Similarity=0.311 Sum_probs=51.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
.++++++|+|+ |.+|..+++.|++.| ++|++.+|+++..++....... ..+..+..+ ..+.+.+ +|+||++
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~-~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGE--LGIAIAYLD----LEELLAE-ADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh--cccceeecc----hhhcccc-CCEEEeC
Confidence 35789999997 999999999999986 7899999988766543321111 112233334 2233666 9999999
Q ss_pred CCCC
Q 025456 143 TGFQ 146 (252)
Q Consensus 143 ag~~ 146 (252)
....
T Consensus 89 ~~~~ 92 (155)
T cd01065 89 TPVG 92 (155)
T ss_pred cCCC
Confidence 8654
No 345
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.64 E-value=0.0009 Score=54.97 Aligned_cols=104 Identities=21% Similarity=0.251 Sum_probs=66.9
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhh----------------------ccccCCC--CeEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSKDNP--SLQIV 117 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~----------------------~~~~~~~--~~~~i 117 (252)
.+++.+|+|.|+ |++|.++++.|+..|. ++++++.+.-.... .+....+ +++.+
T Consensus 18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 456789999996 9999999999999996 67766554211110 0111112 34455
Q ss_pred EeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 118 ~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
..+++ .+.+.+.+.+ +|+||.|... ...-..+-+.|++.++ .+|+.+..+
T Consensus 97 ~~~i~--~~~~~~~~~~-~DvVi~~~d~-------------~~~r~~l~~~~~~~~i-p~i~~g~~g 146 (228)
T cd00757 97 NERLD--AENAEELIAG-YDLVLDCTDN-------------FATRYLINDACVKLGK-PLVSGAVLG 146 (228)
T ss_pred cceeC--HHHHHHHHhC-CCEEEEcCCC-------------HHHHHHHHHHHHHcCC-CEEEEEecc
Confidence 55553 3556777888 9999988642 2234567788888886 566665443
No 346
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.62 E-value=0.00089 Score=59.19 Aligned_cols=104 Identities=24% Similarity=0.286 Sum_probs=66.5
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCc-------------------hhhh---hccccCCCCeE--EE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL-------------------DKAK---TTLSKDNPSLQ--IV 117 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~-------------------~~~~---~~~~~~~~~~~--~i 117 (252)
.++..+|+|.|+ |++|.+++..|+..|. ++++++++. .+.+ +.+....+.++ .+
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 210 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV 210 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 356789999986 9999999999999996 688888762 1111 11111123333 33
Q ss_pred EeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 118 ~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
...+. .+.+.+.+.+ +|+||++... ...-..+-++|++.++ .+|+.+..+
T Consensus 211 ~~~~~--~~~~~~~~~~-~D~Vv~~~d~-------------~~~r~~ln~~~~~~~i-p~i~~~~~g 260 (376)
T PRK08762 211 QERVT--SDNVEALLQD-VDVVVDGADN-------------FPTRYLLNDACVKLGK-PLVYGAVFR 260 (376)
T ss_pred eccCC--hHHHHHHHhC-CCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEEecc
Confidence 33333 3456677777 9999988641 2223456778888886 677765443
No 347
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.61 E-value=0.00029 Score=60.81 Aligned_cols=107 Identities=13% Similarity=0.122 Sum_probs=71.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCC-------eEEEeecCch--hhhhc---cccCC----CCeEEEEeeCCCChHHHH
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLD--KAKTT---LSKDN----PSLQIVKADVTEGSAKLS 129 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~--~~~~~---~~~~~----~~~~~i~~Dl~d~~~~~~ 129 (252)
-.+|.|+|++|++|+.++-.|+..|. ++++++.... ..+.. +.+.. .+..+. ....
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--------~~~~ 74 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--------TDPE 74 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--------cChH
Confidence 36899999999999999999998873 7888887542 12211 10000 111111 1123
Q ss_pred HHHcCCCcEEEEcCCCCC--CCCCCCcceehHHHHHHHHHHHHhcCC-C-EEEEEc
Q 025456 130 EAIGDDSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGV-N-RFILIS 181 (252)
Q Consensus 130 ~~~~~~~d~vi~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~-~-~~v~~S 181 (252)
+.+.+ .|+||.+||... ..+..+.+..|..-...+.+.+++... . .++.+|
T Consensus 75 ~~~~d-aDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 75 EAFKD-VDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred HHhCC-CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 56777 999999999754 345556678899989999999988754 3 444554
No 348
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.61 E-value=0.00019 Score=60.72 Aligned_cols=75 Identities=24% Similarity=0.351 Sum_probs=51.6
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~ 141 (252)
..++++++|+|+ |++|++++..|++.| .+|+++.|+.++.+++........ .+..++ + ..+.+.+ .|+|||
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~~~-~----~~~~~~~-~DivIn 191 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAELDL-E----LQEELAD-FDLIIN 191 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceeecc-c----chhcccc-CCEEEE
Confidence 456899999997 999999999999999 789999999877654432111110 011111 1 2234566 999999
Q ss_pred cCCC
Q 025456 142 ATGF 145 (252)
Q Consensus 142 ~ag~ 145 (252)
+...
T Consensus 192 aTp~ 195 (278)
T PRK00258 192 ATSA 195 (278)
T ss_pred CCcC
Confidence 8754
No 349
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.59 E-value=0.0014 Score=54.46 Aligned_cols=104 Identities=20% Similarity=0.260 Sum_probs=66.3
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhh----------------------hccccCCCCe--EE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAK----------------------TTLSKDNPSL--QI 116 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~--~~ 116 (252)
..++..+|+|.|+ |++|.++++.|+..|. ++++++.+.=... +.+....+.+ +.
T Consensus 28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~ 106 (245)
T PRK05690 28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET 106 (245)
T ss_pred HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence 3456899999998 9999999999999995 6777766421110 0111112333 33
Q ss_pred EEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 117 i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
+...++ .+.+.+.+.+ +|+||.+.. |...-..+-++|++.++ .+|+.++.
T Consensus 107 ~~~~i~--~~~~~~~~~~-~DiVi~~~D-------------~~~~r~~ln~~~~~~~i-p~v~~~~~ 156 (245)
T PRK05690 107 INARLD--DDELAALIAG-HDLVLDCTD-------------NVATRNQLNRACFAAKK-PLVSGAAI 156 (245)
T ss_pred EeccCC--HHHHHHHHhc-CCEEEecCC-------------CHHHHHHHHHHHHHhCC-EEEEeeec
Confidence 444443 3456677888 999998863 22334457788888886 56665443
No 350
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=97.56 E-value=0.0017 Score=52.11 Aligned_cols=110 Identities=23% Similarity=0.382 Sum_probs=68.5
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhc------------------------cccCCCC--eE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT------------------------LSKDNPS--LQ 115 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~------------------------~~~~~~~--~~ 115 (252)
.++..+|+|.|+ |++|.++++.|+..|. ++++++.+.-....+ +....+. ++
T Consensus 16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~ 94 (198)
T cd01485 16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS 94 (198)
T ss_pred HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence 345789999997 5699999999999996 577777652111100 1111233 33
Q ss_pred EEEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeecc
Q 025456 116 IVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGA 188 (252)
Q Consensus 116 ~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~ 188 (252)
.+..++.+..+...+.+.. +|+||.+.. |......+-+.|++.++ .+|+.++.+.+|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~-~dvVi~~~d-------------~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~ 152 (198)
T cd01485 95 IVEEDSLSNDSNIEEYLQK-FTLVIATEE-------------NYERTAKVNDVCRKHHI-PFISCATYGLIGY 152 (198)
T ss_pred EEecccccchhhHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEeecCEEE
Confidence 3444443212345556666 888886632 23334567788999987 6888887766654
No 351
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.56 E-value=0.00067 Score=58.28 Aligned_cols=110 Identities=18% Similarity=0.167 Sum_probs=71.3
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCC--eEEEeecCchhhhh-ccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKT-TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~-~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
+|.|+|++|.+|..++-.|+..+. +++++++++..... .+.+......+.... + .++..+.+.+ .|+||.+||
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~-~~~~~~~~~d-aDivvitaG 76 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--G-EEGLENALKG-ADVVVIPAG 76 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--C-CCchHHHcCC-CCEEEEeCC
Confidence 589999999999999999988874 78888887621111 011011111222101 1 1224567888 999999999
Q ss_pred CCC--CCCCCCcceehHHHHHHHHHHHHhcCCC-EEEEEc
Q 025456 145 FQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (252)
Q Consensus 145 ~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~S 181 (252)
... ..+..+.+..|..-...+.+.+++.+.. .+|.+|
T Consensus 77 ~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs 116 (312)
T TIGR01772 77 VPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT 116 (312)
T ss_pred CCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence 754 3455566788888888888888777643 444444
No 352
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.54 E-value=0.002 Score=52.37 Aligned_cols=106 Identities=25% Similarity=0.315 Sum_probs=66.3
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCc---hhhh------------------hccccCCC--CeEEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL---DKAK------------------TTLSKDNP--SLQIVK 118 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~---~~~~------------------~~~~~~~~--~~~~i~ 118 (252)
.++..+|+|.|+ |++|.++++.|++.|. ++++++.+. +.+. +.+....+ +++.+.
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~ 103 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN 103 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 456789999996 9999999999999996 588887762 1110 00111112 334444
Q ss_pred eeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhc-CCCEEEEEccceee
Q 025456 119 ADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVN 186 (252)
Q Consensus 119 ~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~~v~ 186 (252)
..+++ +.+.+.+.+ +|+||.|.. |...-..+.+.|.+. ++ .+|+.+....|
T Consensus 104 ~~i~~--~~~~~~~~~-~DvVI~a~D-------------~~~~r~~l~~~~~~~~~~-p~I~~~~~~~~ 155 (212)
T PRK08644 104 EKIDE--DNIEELFKD-CDIVVEAFD-------------NAETKAMLVETVLEHPGK-KLVAASGMAGY 155 (212)
T ss_pred eecCH--HHHHHHHcC-CCEEEECCC-------------CHHHHHHHHHHHHHhCCC-CEEEeehhhcc
Confidence 44543 445667777 899888742 233344566777777 65 57776554433
No 353
>PRK08223 hypothetical protein; Validated
Probab=97.53 E-value=0.0014 Score=55.34 Aligned_cols=106 Identities=14% Similarity=0.251 Sum_probs=66.3
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhh----------------------ccccCCCC--eEE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSKDNPS--LQI 116 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~----------------------~~~~~~~~--~~~ 116 (252)
..+++.+|+|.|+ |++|.+++..|+..|. ++.+++.+.=.... .+....+. ++.
T Consensus 23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~ 101 (287)
T PRK08223 23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRA 101 (287)
T ss_pred HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEE
Confidence 3456899999997 9999999999999996 67777665211110 01111233 344
Q ss_pred EEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 117 i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
+...++. +.+.+.+.+ +|+||.+.-. .++..-..+-++|++.++ .+|+.+..
T Consensus 102 ~~~~l~~--~n~~~ll~~-~DlVvD~~D~-----------~~~~~r~~ln~~c~~~~i-P~V~~~~~ 153 (287)
T PRK08223 102 FPEGIGK--ENADAFLDG-VDVYVDGLDF-----------FEFDARRLVFAACQQRGI-PALTAAPL 153 (287)
T ss_pred EecccCc--cCHHHHHhC-CCEEEECCCC-----------CcHHHHHHHHHHHHHcCC-CEEEEecc
Confidence 4444543 446677777 8988865421 012334567788899886 56676543
No 354
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=97.53 E-value=0.00051 Score=60.00 Aligned_cols=99 Identities=20% Similarity=0.247 Sum_probs=58.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHC-CCeEEEe-ecCchhhhhccccCCCCeEEE-EeeCCCChHHHHHHHcCCCcEEEEcC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAK-GFAVKAG-VRDLDKAKTTLSKDNPSLQIV-KADVTEGSAKLSEAIGDDSEAVVCAT 143 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~-~r~~~~~~~~~~~~~~~~~~i-~~Dl~d~~~~~~~~~~~~~d~vi~~a 143 (252)
++|.|.||||++|..+++.|.++ +.+++.+ +++....+. +....+.+... ..++.+ . +..+...+ +|+||.|.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~-~~~~~~~l~~~~~~~~~~-~-~~~~~~~~-~DvVf~al 76 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKP-VSEVHPHLRGLVDLNLEP-I-DEEEIAED-ADVVFLAL 76 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCC-hHHhCccccccCCceeec-C-CHHHhhcC-CCEEEECC
Confidence 47999999999999999999987 5677744 443322211 11001111111 112221 1 12334456 99999988
Q ss_pred CCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 144 GFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 144 g~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
+.. ....++..+.++|+ ++|=.|+..
T Consensus 77 P~~--------------~s~~~~~~~~~~G~-~VIDlS~~f 102 (346)
T TIGR01850 77 PHG--------------VSAELAPELLAAGV-KVIDLSADF 102 (346)
T ss_pred Cch--------------HHHHHHHHHHhCCC-EEEeCChhh
Confidence 632 34566677767774 788888764
No 355
>PRK08328 hypothetical protein; Provisional
Probab=97.51 E-value=0.0017 Score=53.52 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=66.3
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhc-----------------------cccCCCC--eEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT-----------------------LSKDNPS--LQI 116 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~-----------------------~~~~~~~--~~~ 116 (252)
.+++.+|+|.|+ |++|.++++.|+..|. ++++++.+.-....+ +....+. ++.
T Consensus 24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~ 102 (231)
T PRK08328 24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET 102 (231)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence 456789999997 9999999999999995 677776542111100 0001122 333
Q ss_pred EEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeec
Q 025456 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNG 187 (252)
Q Consensus 117 i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~ 187 (252)
+...++ ++.+.+.+++ .|+||.+.. |...-..+-++|++.++ .+|+.+..+.+|
T Consensus 103 ~~~~~~--~~~~~~~l~~-~D~Vid~~d-------------~~~~r~~l~~~~~~~~i-p~i~g~~~g~~G 156 (231)
T PRK08328 103 FVGRLS--EENIDEVLKG-VDVIVDCLD-------------NFETRYLLDDYAHKKGI-PLVHGAVEGTYG 156 (231)
T ss_pred EeccCC--HHHHHHHHhc-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEeeccCEE
Confidence 333443 3446667777 888887763 22233455677888886 577766655444
No 356
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=97.50 E-value=0.0026 Score=53.39 Aligned_cols=105 Identities=18% Similarity=0.204 Sum_probs=65.1
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhh----------------------ccccCCCCeEEEEe
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKT----------------------TLSKDNPSLQIVKA 119 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~----------------------~~~~~~~~~~~i~~ 119 (252)
.+++.+|+|.|+ |++|+++++.|++.| -++++++.+.-.... .+....+.+++...
T Consensus 27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i 105 (268)
T PRK15116 27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV 105 (268)
T ss_pred HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence 456789999997 999999999999999 578887765211110 01112233333332
Q ss_pred e-CCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 120 D-VTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 120 D-l~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
+ ..+ .+.+.+.+..++|+||.+... +..-..+.+.|++.++ .+|.++..
T Consensus 106 ~~~i~-~e~~~~ll~~~~D~VIdaiD~-------------~~~k~~L~~~c~~~~i-p~I~~gGa 155 (268)
T PRK15116 106 DDFIT-PDNVAEYMSAGFSYVIDAIDS-------------VRPKAALIAYCRRNKI-PLVTTGGA 155 (268)
T ss_pred ecccC-hhhHHHHhcCCCCEEEEcCCC-------------HHHHHHHHHHHHHcCC-CEEEECCc
Confidence 2 222 345555554238888887652 2334568888999887 56666554
No 357
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.50 E-value=0.0015 Score=57.26 Aligned_cols=38 Identities=29% Similarity=0.331 Sum_probs=31.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchh
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK 102 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~ 102 (252)
++++|+|+||||++|+++++.|+++.. +++.+.++...
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~ 40 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERS 40 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence 468999999999999999999998764 88877565543
No 358
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.49 E-value=0.0018 Score=56.82 Aligned_cols=105 Identities=16% Similarity=0.145 Sum_probs=67.9
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhh----------------------hccccCCCC--eEE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAK----------------------TTLSKDNPS--LQI 116 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~--~~~ 116 (252)
..+++.+|+|.|+ |++|.++++.|+..|. ++++++.+.=... +.+....+. ++.
T Consensus 24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~ 102 (355)
T PRK05597 24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV 102 (355)
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence 3456799999997 9999999999999996 6777776531110 011111233 344
Q ss_pred EEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 117 i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
+...++. +...+.+.+ +|+||.+.. |...-..+-++|++.++ .+|+.+..+
T Consensus 103 ~~~~i~~--~~~~~~~~~-~DvVvd~~d-------------~~~~r~~~n~~c~~~~i-p~v~~~~~g 153 (355)
T PRK05597 103 SVRRLTW--SNALDELRD-ADVILDGSD-------------NFDTRHLASWAAARLGI-PHVWASILG 153 (355)
T ss_pred EEeecCH--HHHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEEec
Confidence 4455543 455667788 999998864 23333456678888886 577765543
No 359
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.49 E-value=0.00098 Score=57.89 Aligned_cols=94 Identities=22% Similarity=0.298 Sum_probs=55.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCC---eEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
+++|.|+||||++|+.+++.|.++++ ++..+. +.+...+.+. . .+ ...++.+ .+.. + +.+ +|+||.+
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~-s~~~aG~~l~-~-~~---~~l~~~~-~~~~-~-~~~-vD~vFla 73 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLA-SSESAGHSVP-F-AG---KNLRVRE-VDSF-D-FSQ-VQLAFFA 73 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEE-CcccCCCeec-c-CC---cceEEee-CChH-H-hcC-CCEEEEc
Confidence 57999999999999999999997765 333433 3222221111 1 11 2234433 2211 2 467 9999988
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
.+.. ....+++.+.++|+ ++|=.|+..
T Consensus 74 ~p~~--------------~s~~~v~~~~~~G~-~VIDlS~~f 100 (336)
T PRK05671 74 AGAA--------------VSRSFAEKARAAGC-SVIDLSGAL 100 (336)
T ss_pred CCHH--------------HHHHHHHHHHHCCC-eEEECchhh
Confidence 7521 13446677777776 566666653
No 360
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=97.45 E-value=0.00056 Score=58.35 Aligned_cols=112 Identities=18% Similarity=0.190 Sum_probs=71.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhhccccCCCCeEE--EEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQI--VKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~--i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
++|.|+|+ |+||+.++-.|+.++ .+++++++..+..+-...+......+ ....+.. ... .+.+.+ .|+|+-.
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~-~~~-y~~~~~-aDiVvit 76 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITG-DGD-YEDLKG-ADIVVIT 76 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEec-CCC-hhhhcC-CCEEEEe
Confidence 58999999 999999999998875 48999998844332111000000000 0111111 011 345778 9999999
Q ss_pred CCCCC--CCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEcc
Q 025456 143 TGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (252)
Q Consensus 143 ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS 182 (252)
||... ..+..+.++.|..-...+.+...+.+..-++.+-|
T Consensus 77 AG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt 118 (313)
T COG0039 77 AGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT 118 (313)
T ss_pred CCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence 98754 34566778899988888988888776544444443
No 361
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.45 E-value=0.0046 Score=46.75 Aligned_cols=99 Identities=20% Similarity=0.290 Sum_probs=63.5
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhh----------------------hccccCCCC--eEEEEeeCC
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAK----------------------TTLSKDNPS--LQIVKADVT 122 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~--~~~i~~Dl~ 122 (252)
+|+|.|+ |++|.++++.|+..|. ++++++.+.-... +.+....+. ++.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 5889997 9999999999999997 6887776521110 001111223 334444443
Q ss_pred CChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 123 EGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 123 d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
+ +...+.+.+ .|+||.+.. |......+.+.|++.++ .++..++.+
T Consensus 80 ~--~~~~~~~~~-~diVi~~~d-------------~~~~~~~l~~~~~~~~i-~~i~~~~~g 124 (143)
T cd01483 80 E--DNLDDFLDG-VDLVIDAID-------------NIAVRRALNRACKELGI-PVIDAGGLG 124 (143)
T ss_pred h--hhHHHHhcC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEcCCC
Confidence 3 233566677 999988764 23345678888999886 677777654
No 362
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=97.45 E-value=0.01 Score=45.52 Aligned_cols=154 Identities=18% Similarity=0.174 Sum_probs=84.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeC--CCChHH----HHHHHcC-CCcE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADV--TEGSAK----LSEAIGD-DSEA 138 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl--~d~~~~----~~~~~~~-~~d~ 138 (252)
..+|+|-||-|-+|+++++.+.+++|-|.-++....... +.-.++..|- ++.+++ +.+.+.+ ++|.
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDa 75 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDA 75 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-------cceEEecCCcchhHHHHHHHHHHHHhhcccccce
Confidence 578999999999999999999999998887766543211 1112222221 111222 3334444 7999
Q ss_pred EEEcCCCCCCCC---------CCCcceehHHHHHHHHHHH-HhcCCCEEEEEccc-eeeccCCCCCCCcchhccchhhHH
Q 025456 139 VVCATGFQPGWD---------LFAPWKVDNFGTVNLVEAC-RKRGVNRFILISSI-LVNGAAMGQILNPAYIFLNVFGLT 207 (252)
Q Consensus 139 vi~~ag~~~~~~---------~~~~~~~n~~g~~~ll~~~-~~~~~~~~v~~SS~-~v~~~~~~~~~~~~~~~~~~~~~y 207 (252)
||..||.....+ .+.+++-.+....--...+ ...+.+-++..... ...+. ...+-.|
T Consensus 76 v~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~g------------TPgMIGY 143 (236)
T KOG4022|consen 76 VFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGG------------TPGMIGY 143 (236)
T ss_pred EEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCC------------CCcccch
Confidence 999887533221 1122222222111111111 12223344444332 22211 2234679
Q ss_pred HHHHHHHHHHHH-----HcCC----cEEEEeCCcccCCCC
Q 025456 208 LIAKLQAEQYIR-----KSGI----NYTIIRPGGLRNEPP 238 (252)
Q Consensus 208 ~~sK~~~e~~~~-----~~gi----~~~~lrPg~i~~~~~ 238 (252)
+.+|.+..++.+ +.|+ -+..|-|-.+.+|+.
T Consensus 144 GMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMN 183 (236)
T KOG4022|consen 144 GMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMN 183 (236)
T ss_pred hHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccc
Confidence 999999998875 2444 366677777777764
No 363
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.45 E-value=0.0026 Score=51.34 Aligned_cols=73 Identities=18% Similarity=0.300 Sum_probs=52.9
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
++++++++|.|| |-+|..-++.|++.|++|++++......-..+. ...+++++..+... ..+.+ .+.||-+
T Consensus 6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~~~~~~~------~dl~~-~~lVi~a 76 (205)
T TIGR01470 6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWLARCFDA------DILEG-AFLVIAA 76 (205)
T ss_pred EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEEeCCCCH------HHhCC-cEEEEEC
Confidence 456899999997 999999999999999999998876542221121 22378888877653 23566 8888765
Q ss_pred CC
Q 025456 143 TG 144 (252)
Q Consensus 143 ag 144 (252)
.+
T Consensus 77 t~ 78 (205)
T TIGR01470 77 TD 78 (205)
T ss_pred CC
Confidence 44
No 364
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.43 E-value=0.00041 Score=58.45 Aligned_cols=72 Identities=18% Similarity=0.275 Sum_probs=49.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCC--CCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN--PSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
++++++|+|+ |++|++++..|++.|++|++..|+.++.++...... ..+.. .++.+ ....+ +|+||++
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~--~~~~~------~~~~~-~DivIna 185 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQA--FSMDE------LPLHR-VDLIINA 185 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEE--echhh------hcccC-ccEEEEC
Confidence 4789999998 899999999999999999999998876654332111 11121 11111 12345 8999999
Q ss_pred CCCC
Q 025456 143 TGFQ 146 (252)
Q Consensus 143 ag~~ 146 (252)
.+..
T Consensus 186 tp~g 189 (270)
T TIGR00507 186 TSAG 189 (270)
T ss_pred CCCC
Confidence 8754
No 365
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.43 E-value=0.00085 Score=57.05 Aligned_cols=71 Identities=21% Similarity=0.279 Sum_probs=53.0
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
.+.+++++|+|. |.+|+.+++.|...|++|++..|++++...... .+...+ + .+.+.+.+.+ .|+||++
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~---~g~~~~-----~-~~~l~~~l~~-aDiVint 216 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE---MGLIPF-----P-LNKLEEKVAE-IDIVINT 216 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---CCCeee-----c-HHHHHHHhcc-CCEEEEC
Confidence 567899999997 889999999999999999999998765443221 122211 1 3446677777 9999998
Q ss_pred CC
Q 025456 143 TG 144 (252)
Q Consensus 143 ag 144 (252)
..
T Consensus 217 ~P 218 (287)
T TIGR02853 217 IP 218 (287)
T ss_pred CC
Confidence 64
No 366
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.40 E-value=0.0021 Score=55.77 Aligned_cols=100 Identities=17% Similarity=0.124 Sum_probs=61.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCC---ChHHHHHHHcCCCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE---GSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d---~~~~~~~~~~~~~d~vi~ 141 (252)
.+.+|+|+||+|.+|..+++.+...|.+|++++++.++.+...... +++.+ .|..+ ..+.+.+...+.+|+||+
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l--Ga~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d 227 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL--GFDDA-FNYKEEPDLDAALKRYFPNGIDIYFD 227 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCcee-EEcCCcccHHHHHHHhCCCCcEEEEE
Confidence 4789999999999999999888888999999888876654332101 12211 23221 012333333223999999
Q ss_pred cCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 142 ~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
+.|.. .....++.++.. ++++.++..
T Consensus 228 ~~g~~--------------~~~~~~~~l~~~--G~iv~~G~~ 253 (338)
T cd08295 228 NVGGK--------------MLDAVLLNMNLH--GRIAACGMI 253 (338)
T ss_pred CCCHH--------------HHHHHHHHhccC--cEEEEeccc
Confidence 87721 123445555544 478877643
No 367
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.39 E-value=0.0011 Score=59.84 Aligned_cols=75 Identities=19% Similarity=0.178 Sum_probs=49.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhh---hccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
+++++++|+|+++ +|.++++.|++.|++|++.+++..... +.+. ..++.+..++. ...+. -.+ +|.||
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~--~~g~~~~~~~~---~~~~~--~~~-~d~vV 73 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELL--EEGIKVICGSH---PLELL--DED-FDLMV 73 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHH--hcCCEEEeCCC---CHHHh--cCc-CCEEE
Confidence 3579999999966 999999999999999999887643211 1111 12445543321 11111 124 89999
Q ss_pred EcCCCCC
Q 025456 141 CATGFQP 147 (252)
Q Consensus 141 ~~ag~~~ 147 (252)
.+.|+..
T Consensus 74 ~s~gi~~ 80 (447)
T PRK02472 74 KNPGIPY 80 (447)
T ss_pred ECCCCCC
Confidence 9999764
No 368
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=97.39 E-value=0.00071 Score=56.17 Aligned_cols=112 Identities=22% Similarity=0.194 Sum_probs=68.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEe---ecC-chhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG---VRD-LDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~---~r~-~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
.+.+|.|.||+|+||+-|.- |++....|.-+ +-. .......+...+.+..+ ...+- ++++.+++.+ .|+||
T Consensus 27 ~~~KVAvlGAaGGIGQPLSL-LlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V--~g~~g-~~~L~~al~~-advVv 101 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSL-LLKLNPLVSELALYDIANTPGVAADLSHINTNSSV--VGFTG-ADGLENALKG-ADVVV 101 (345)
T ss_pred CcceEEEEecCCccCccHHH-HHhcCcccceeeeeecccCCcccccccccCCCCce--eccCC-hhHHHHHhcC-CCEEE
Confidence 47899999999999999965 44554433222 111 11111111100111111 11111 5789999999 99999
Q ss_pred EcCCCCC--CCCCCCcceehHHHHHHHHHHHHhcCCC-EEEEEc
Q 025456 141 CATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (252)
Q Consensus 141 ~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~S 181 (252)
--||+.+ .-..++.|++|..-...+..++.+...+ .+.++|
T Consensus 102 IPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs 145 (345)
T KOG1494|consen 102 IPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS 145 (345)
T ss_pred ecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence 9999865 3456678999998889998888766433 344444
No 369
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=97.39 E-value=0.0029 Score=54.25 Aligned_cols=102 Identities=18% Similarity=0.177 Sum_probs=64.6
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhc----------------------cccCC--CCeEEEEeeCC
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSKDN--PSLQIVKADVT 122 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~----------------------~~~~~--~~~~~i~~Dl~ 122 (252)
+|+|.|+ |++|.++++.|+..|. ++++++.+.-....+ +.... -+++.+..++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 5899997 9999999999999996 677777653221110 00011 23445555665
Q ss_pred CChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceee
Q 025456 123 EGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVN 186 (252)
Q Consensus 123 d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~ 186 (252)
+ .+...+.+.+ +|+||.+.. |...-..+-+.|++.++ .+|..++.+.+
T Consensus 80 ~-~~~~~~f~~~-~DvVv~a~D-------------n~~ar~~in~~c~~~~i-p~I~~gt~G~~ 127 (312)
T cd01489 80 D-PDFNVEFFKQ-FDLVFNALD-------------NLAARRHVNKMCLAADV-PLIESGTTGFL 127 (312)
T ss_pred C-ccchHHHHhc-CCEEEECCC-------------CHHHHHHHHHHHHHCCC-CEEEEecCcce
Confidence 5 3333456677 888887753 34445667788888886 57777665543
No 370
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.38 E-value=0.0023 Score=55.17 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=61.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCC--Ch-HHHHHHHcCCCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GS-AKLSEAIGDDSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d--~~-~~~~~~~~~~~d~vi~ 141 (252)
.+.+|+|+||+|.+|..+++.+...|.+|++++++.++.+.... . +++.+ .|..+ .. +.+.+...+.+|+||.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~-l--Ga~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d 213 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK-L--GFDVA-FNYKTVKSLEETLKKASPDGYDCYFD 213 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--CCCEE-EeccccccHHHHHHHhCCCCeEEEEE
Confidence 47899999999999999998888889999998888766544322 2 22211 22222 01 2222222213999999
Q ss_pred cCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 142 ~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
+.|.. .....++.++.. +++|.++..
T Consensus 214 ~~G~~--------------~~~~~~~~l~~~--G~iv~~G~~ 239 (325)
T TIGR02825 214 NVGGE--------------FSNTVIGQMKKF--GRIAICGAI 239 (325)
T ss_pred CCCHH--------------HHHHHHHHhCcC--cEEEEecch
Confidence 88731 123344544444 478887754
No 371
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=97.38 E-value=0.0015 Score=56.97 Aligned_cols=68 Identities=15% Similarity=0.255 Sum_probs=44.1
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCeE---EEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGFAV---KAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~~V---~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
+|+|.||||++|+.+++.|.++++.+ ..+.+..+..+... ..+......|+.. ..+.+ +|+||.++|
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~---~~~~~~~~~~~~~------~~~~~-~D~v~~a~g 70 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT---FKGKELEVNEAKI------ESFEG-IDIALFSAG 70 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee---eCCeeEEEEeCCh------HHhcC-CCEEEECCC
Confidence 58999999999999999999988754 34445543322211 1123444455532 23466 999999887
Q ss_pred C
Q 025456 145 F 145 (252)
Q Consensus 145 ~ 145 (252)
.
T Consensus 71 ~ 71 (339)
T TIGR01296 71 G 71 (339)
T ss_pred H
Confidence 3
No 372
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=97.37 E-value=0.005 Score=56.55 Aligned_cols=161 Identities=20% Similarity=0.196 Sum_probs=95.4
Q ss_pred CCCcEEEEEcCC-ChHHHHHHHHHHHCCCeEEEeecCchhhh-h----cccc---CCCCeEEEEeeCCCC--hHHHHHHH
Q 025456 64 VKQKKIFVAGAT-GSSGKRIVEQLLAKGFAVKAGVRDLDKAK-T----TLSK---DNPSLQIVKADVTEG--SAKLSEAI 132 (252)
Q Consensus 64 ~~~~~vlVtGat-G~iG~~l~~~L~~~G~~V~~~~r~~~~~~-~----~~~~---~~~~~~~i~~Dl~d~--~~~~~~~~ 132 (252)
...+.++||||+ |-||..++..|++.|..|++..-+.++.. + ++.. ....+-++.++.... .+.+.+++
T Consensus 394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI 473 (866)
T COG4982 394 YGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI 473 (866)
T ss_pred cccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence 467999999987 68999999999999999998776544321 1 2211 233456677776541 34455554
Q ss_pred cC-----------------CCcEEEEcCCCCCCCCC-------CCcceehHHHHHHHHHHHHhcCCC-------EEEEEc
Q 025456 133 GD-----------------DSEAVVCATGFQPGWDL-------FAPWKVDNFGTVNLVEACRKRGVN-------RFILIS 181 (252)
Q Consensus 133 ~~-----------------~~d~vi~~ag~~~~~~~-------~~~~~~n~~g~~~ll~~~~~~~~~-------~~v~~S 181 (252)
.. .+|.+|-.|++.-..+. +..+++-++...+++-..++.+.. ++|.-.
T Consensus 474 g~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPg 553 (866)
T COG4982 474 GDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPG 553 (866)
T ss_pred ccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecC
Confidence 32 25677766665432221 122456666677777776654421 455555
Q ss_pred cceeeccCCCCCCCcchhccchhhHHHHHHHHHHHHHHHc--------CCcEEEEeCCcccCCC
Q 025456 182 SILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS--------GINYTIIRPGGLRNEP 237 (252)
Q Consensus 182 S~~v~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~--------gi~~~~lrPg~i~~~~ 237 (252)
|-. .-....-+.|+.+|.+.|.++.+. .+.++--+.|++.|.+
T Consensus 554 SPN-------------rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTG 604 (866)
T COG4982 554 SPN-------------RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTG 604 (866)
T ss_pred CCC-------------CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecccc
Confidence 431 101122377999999999877431 2344445566666543
No 373
>PRK04148 hypothetical protein; Provisional
Probab=97.37 E-value=0.0032 Score=47.04 Aligned_cols=94 Identities=19% Similarity=0.151 Sum_probs=68.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
+++++++.|. | .|.+++..|.+.|++|++++.++...+.... ..++++.+|+.++.- ++.++ +|.|+..=
T Consensus 16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~---~~~~~v~dDlf~p~~---~~y~~-a~liysir- 85 (134)
T PRK04148 16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK---LGLNAFVDDLFNPNL---EIYKN-AKLIYSIR- 85 (134)
T ss_pred cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH---hCCeEEECcCCCCCH---HHHhc-CCEEEEeC-
Confidence 3588999997 5 8889999999999999999999886654332 357899999998422 34456 88887442
Q ss_pred CCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEE
Q 025456 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILI 180 (252)
Q Consensus 145 ~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~ 180 (252)
+. ..-...+++.+++.++.-+|..
T Consensus 86 --pp----------~el~~~~~~la~~~~~~~~i~~ 109 (134)
T PRK04148 86 --PP----------RDLQPFILELAKKINVPLIIKP 109 (134)
T ss_pred --CC----------HHHHHHHHHHHHHcCCCEEEEc
Confidence 11 2234578899999998655554
No 374
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.36 E-value=0.0036 Score=48.56 Aligned_cols=66 Identities=21% Similarity=0.297 Sum_probs=47.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
|++|.+.|- |-+|+.+++.|++.|++|++.+|++++.+++.. .+++. .++..++... .|+||-+..
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~g~~~--------~~s~~e~~~~-~dvvi~~v~ 66 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE---AGAEV--------ADSPAEAAEQ-ADVVILCVP 66 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH---TTEEE--------ESSHHHHHHH-BSEEEE-SS
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH---hhhhh--------hhhhhhHhhc-ccceEeecc
Confidence 579999996 999999999999999999999999888776553 12211 1234456666 788887754
No 375
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=97.35 E-value=0.0031 Score=56.09 Aligned_cols=108 Identities=17% Similarity=0.203 Sum_probs=67.7
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhh----------------------ccccCCCC--eEE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSKDNPS--LQI 116 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~----------------------~~~~~~~~--~~~ 116 (252)
..++..+|+|.|+ |++|.++++.|+..|. ++++++.+.=.... .+....+. ++.
T Consensus 38 ~~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~ 116 (392)
T PRK07878 38 KRLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRL 116 (392)
T ss_pred HHHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEE
Confidence 3456789999997 9999999999999996 67776654211110 01111223 333
Q ss_pred EEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeec
Q 025456 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNG 187 (252)
Q Consensus 117 i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~ 187 (252)
+...++. +...+.+.+ +|+||.+.. |...-..+-++|++.++ .+|+.+..+.+|
T Consensus 117 ~~~~i~~--~~~~~~~~~-~D~Vvd~~d-------------~~~~r~~ln~~~~~~~~-p~v~~~~~g~~G 170 (392)
T PRK07878 117 HEFRLDP--SNAVELFSQ-YDLILDGTD-------------NFATRYLVNDAAVLAGK-PYVWGSIYRFEG 170 (392)
T ss_pred EeccCCh--hHHHHHHhc-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence 4444443 445667777 898887753 23333456678888886 577776655444
No 376
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.35 E-value=0.001 Score=57.41 Aligned_cols=113 Identities=21% Similarity=0.168 Sum_probs=68.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhhc-ccc-CCCCeEEEEeeCCCChHHHHHHHcCCCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTT-LSK-DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~-~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~ 141 (252)
+.++|.|+|| |.+|..++..|+..| .++++++++.+..+.. ++. ......-....+.. ..+.+ .+.+ .|+||.
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d~~-~l~~-ADiVVi 79 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNNYE-DIKD-SDVVVI 79 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCCHH-HhCC-CCEEEE
Confidence 3679999997 999999999998888 6899999876543211 100 00000000011111 12233 6678 999999
Q ss_pred cCCCCCC--CCCCCcceehHHHHHHHHHHHHhcCCCE-EEEEc
Q 025456 142 ATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVNR-FILIS 181 (252)
Q Consensus 142 ~ag~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~~~~-~v~~S 181 (252)
++|.... .+..+.+..|..-...+.+.+.+...+. ++++|
T Consensus 80 tag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs 122 (319)
T PTZ00117 80 TAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVT 122 (319)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9986542 3334455667766677777777665433 55554
No 377
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.35 E-value=0.0042 Score=51.07 Aligned_cols=104 Identities=23% Similarity=0.303 Sum_probs=64.3
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhh----------------------ccccCCCC--eEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSKDNPS--LQIV 117 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~----------------------~~~~~~~~--~~~i 117 (252)
.+++.+|+|.|. |++|+++++.|++.|. ++++++.+.=.... .+....+. ++.+
T Consensus 8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~ 86 (231)
T cd00755 8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV 86 (231)
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence 346789999997 9999999999999996 77777765311100 01111223 3334
Q ss_pred EeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 118 ~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
...++ .+...+.+..++|+||.+.. |...-..+.+.|++.++ .+|...+.
T Consensus 87 ~~~i~--~~~~~~l~~~~~D~VvdaiD-------------~~~~k~~L~~~c~~~~i-p~I~s~g~ 136 (231)
T cd00755 87 EEFLT--PDNSEDLLGGDPDFVVDAID-------------SIRAKVALIAYCRKRKI-PVISSMGA 136 (231)
T ss_pred eeecC--HhHHHHHhcCCCCEEEEcCC-------------CHHHHHHHHHHHHHhCC-CEEEEeCC
Confidence 43443 24455555423888888753 23345568889999886 56665444
No 378
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=97.31 E-value=0.00063 Score=57.13 Aligned_cols=110 Identities=19% Similarity=0.131 Sum_probs=68.7
Q ss_pred EEEEcCCChHHHHHHHHHHHCC----CeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 69 IFVAGATGSSGKRIVEQLLAKG----FAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
|.|+||+|.+|..++..|+..| .+|+++++++++++..... ...... ....+.- .++..+.+.+ .|+||..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~-~~d~~~~~~~-aDiVv~t 77 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSI-TDDPYEAFKD-ADVVIIT 77 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEE-CCchHHHhCC-CCEEEEC
Confidence 5789999999999999999988 6899999887554321110 000000 1112221 2235667888 9999999
Q ss_pred CCCCCCC--CCCCcceehHHHHHHHHHHHHhcCCC-EEEEEc
Q 025456 143 TGFQPGW--DLFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (252)
Q Consensus 143 ag~~~~~--~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~S 181 (252)
+|..... +......-|+.-.+.+.+.+++.... .++.+|
T Consensus 78 ~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 78 AGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9865432 22234556777777778877766533 444443
No 379
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.30 E-value=0.0029 Score=55.24 Aligned_cols=100 Identities=15% Similarity=0.121 Sum_probs=61.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCC---ChHHHHHHHcCCCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE---GSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d---~~~~~~~~~~~~~d~vi~ 141 (252)
.+.+|+|.||+|.+|..+++.+...|.+|++++++.++.+...... +++.+ .|..+ ..+.+.+...+.+|++|.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l--Ga~~v-i~~~~~~~~~~~i~~~~~~gvD~v~d 234 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL--GFDEA-FNYKEEPDLDAALKRYFPEGIDIYFD 234 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc--CCCEE-EECCCcccHHHHHHHHCCCCcEEEEE
Confidence 4789999999999999999888888999998888776654322111 12211 23222 012333332223999999
Q ss_pred cCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 142 ~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
+.|.. .....++.++.. ++++.++..
T Consensus 235 ~vG~~--------------~~~~~~~~l~~~--G~iv~~G~~ 260 (348)
T PLN03154 235 NVGGD--------------MLDAALLNMKIH--GRIAVCGMV 260 (348)
T ss_pred CCCHH--------------HHHHHHHHhccC--CEEEEECcc
Confidence 98721 123344444444 478877653
No 380
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.30 E-value=0.0012 Score=51.51 Aligned_cols=57 Identities=25% Similarity=0.350 Sum_probs=45.2
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
++.+++++|+|+++.+|..+++.|.++|.+|+++.|+.+ ++.+.+.+ .|+||.+
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~-------------------------~l~~~l~~-aDiVIsa 94 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK-------------------------NLKEHTKQ-ADIVIVA 94 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch-------------------------hHHHHHhh-CCEEEEc
Confidence 467999999999767899999999999999998887531 24456666 8888887
Q ss_pred CCC
Q 025456 143 TGF 145 (252)
Q Consensus 143 ag~ 145 (252)
.+.
T Consensus 95 t~~ 97 (168)
T cd01080 95 VGK 97 (168)
T ss_pred CCC
Confidence 764
No 381
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.30 E-value=0.00091 Score=56.77 Aligned_cols=78 Identities=17% Similarity=0.129 Sum_probs=53.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
.++++++|.|+ |+.|++++..|++.|. +|+++.|+.++.+.+.........+.. +.. .+++.+.+.+ .|+|||+
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~-~~~~~~~~~~-~DiVIna 197 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEG-DSGGLAIEKA-AEVLVST 197 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccc-hhhhhhcccC-CCEEEEC
Confidence 46789999996 9999999999999996 799999998877654432111111111 111 1233445566 9999999
Q ss_pred CCCC
Q 025456 143 TGFQ 146 (252)
Q Consensus 143 ag~~ 146 (252)
....
T Consensus 198 Tp~g 201 (282)
T TIGR01809 198 VPAD 201 (282)
T ss_pred CCCC
Confidence 7654
No 382
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.30 E-value=0.00054 Score=58.20 Aligned_cols=72 Identities=21% Similarity=0.288 Sum_probs=50.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhccccC---CCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKD---NPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
..+++|+|.|+ |+.|++++..|++.|. +|++++|+.++.+.+.... .....+.. . +++.+.+.+ .|+|
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~----~~~~~~~~~-aDiV 196 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA--G----SDLAAALAA-ADGL 196 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe--c----cchHhhhCC-CCEE
Confidence 45789999997 8999999999999997 7999999987766543211 11222211 1 223445667 9999
Q ss_pred EEcC
Q 025456 140 VCAT 143 (252)
Q Consensus 140 i~~a 143 (252)
||+.
T Consensus 197 InaT 200 (284)
T PRK12549 197 VHAT 200 (284)
T ss_pred EECC
Confidence 9994
No 383
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=97.29 E-value=0.0045 Score=50.98 Aligned_cols=100 Identities=15% Similarity=0.090 Sum_probs=62.2
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhc----------------------cccCC--CCeEEEEeeCC
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSKDN--PSLQIVKADVT 122 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~----------------------~~~~~--~~~~~i~~Dl~ 122 (252)
+|+|.|+ |++|.++++.|+..|. ++++++.+.=....+ +.... -+++.+..++.
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 4789985 9999999999999996 677777653111100 00011 23444555564
Q ss_pred CChHH-HHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 123 EGSAK-LSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 123 d~~~~-~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
+ ... -.+.+.+ +|+||.+.. |...-..+-+.|.+.++ .+|..++.+
T Consensus 80 ~-~~~~~~~f~~~-~DvVi~a~D-------------n~~aR~~ln~~c~~~~i-plI~~g~~G 126 (234)
T cd01484 80 P-EQDFNDTFFEQ-FHIIVNALD-------------NIIARRYVNGMLIFLIV-PLIESGTEG 126 (234)
T ss_pred h-hhhchHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEcccC
Confidence 4 222 2345666 888887753 34455667788888876 577766654
No 384
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=97.29 E-value=0.0036 Score=55.14 Aligned_cols=104 Identities=14% Similarity=0.234 Sum_probs=67.8
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhh----------------------ccccCCC--CeEE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSKDNP--SLQI 116 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~----------------------~~~~~~~--~~~~ 116 (252)
..++..+|+|.|+ |++|.++++.|+..|. ++++++.+.=.... .+....+ +++.
T Consensus 37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 115 (370)
T PRK05600 37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA 115 (370)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence 4456889999997 9999999999999995 78887776211100 0111122 3444
Q ss_pred EEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 117 i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
+...++ .+.+.+.+.+ +|+||.|.. |...-..+-++|++.++ .+|+.+..
T Consensus 116 ~~~~i~--~~~~~~~~~~-~DlVid~~D-------------n~~~r~~in~~~~~~~i-P~v~~~~~ 165 (370)
T PRK05600 116 LRERLT--AENAVELLNG-VDLVLDGSD-------------SFATKFLVADAAEITGT-PLVWGTVL 165 (370)
T ss_pred eeeecC--HHHHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEEe
Confidence 444554 3456677888 999998864 23334456677888886 46666543
No 385
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.28 E-value=0.0026 Score=47.03 Aligned_cols=93 Identities=20% Similarity=0.328 Sum_probs=55.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHH-CCCeEEEe-ecCchhhh-hccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLA-KGFAVKAG-VRDLDKAK-TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~-~G~~V~~~-~r~~~~~~-~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~a 143 (252)
++|+|.|++|.+|+.+++.+.+ .+.++... +|+++... +..... .+.. ...+.- .+++.+.+.. +|++|.+.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~-~~~~--~~~~~v-~~~l~~~~~~-~DVvIDfT 75 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGEL-AGIG--PLGVPV-TDDLEELLEE-ADVVIDFT 75 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHH-CTSS--T-SSBE-BS-HHHHTTH--SEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhh-hCcC--Cccccc-chhHHHhccc-CCEEEEcC
Confidence 5899999999999999999999 57886655 45442111 111000 0000 011111 2456777777 99999875
Q ss_pred CCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEE
Q 025456 144 GFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFIL 179 (252)
Q Consensus 144 g~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~ 179 (252)
. -.++...++.|.++++ .+|.
T Consensus 76 ~--------------p~~~~~~~~~~~~~g~-~~Vi 96 (124)
T PF01113_consen 76 N--------------PDAVYDNLEYALKHGV-PLVI 96 (124)
T ss_dssp ---------------HHHHHHHHHHHHHHT--EEEE
T ss_pred C--------------hHHhHHHHHHHHhCCC-CEEE
Confidence 2 3456778888888886 4433
No 386
>PRK06223 malate dehydrogenase; Reviewed
Probab=97.28 E-value=0.0013 Score=56.57 Aligned_cols=112 Identities=18% Similarity=0.165 Sum_probs=66.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
|++|.|+|+ |.+|..++..++..|. +|++++++++..+..... ...........++. ..+. +.+.+ .|+||.+
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~-~~d~-~~~~~-aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITG-TNDY-EDIAG-SDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEe-CCCH-HHHCC-CCEEEEC
Confidence 579999998 9999999999998875 899999977654321110 00000000011111 1112 34677 9999999
Q ss_pred CCCCCCCC--CCCcceehHHHHHHHHHHHHhcCCC-EEEEEc
Q 025456 143 TGFQPGWD--LFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (252)
Q Consensus 143 ag~~~~~~--~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~S 181 (252)
+|.....+ ..+.+.-|+.-...+++.+++...+ .+|.++
T Consensus 78 ~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t 119 (307)
T PRK06223 78 AGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT 119 (307)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 98654222 2233445666667777777665433 455554
No 387
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.28 E-value=0.0032 Score=54.02 Aligned_cols=97 Identities=23% Similarity=0.290 Sum_probs=61.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
.+.+++|+||+|.+|.++++.+...|.+|+++.+++++.+.. ..... -.++ |..+..+.+.+. .+ +|+|++++|
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~-~~~~--~~~~~~~~~~~~-~~-~d~v~~~~g 235 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGA-DYVI--DGSKFSEDVKKL-GG-ADVVIELVG 235 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCC-cEEE--ecHHHHHHHHhc-cC-CCEEEECCC
Confidence 468999999999999999999999999999998877654432 11111 1112 221101223322 35 999999987
Q ss_pred CCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 145 ~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
.. ....+++.++.. +++|.++..
T Consensus 236 ~~--------------~~~~~~~~~~~~--g~~v~~g~~ 258 (332)
T cd08259 236 SP--------------TIEESLRSLNKG--GRLVLIGNV 258 (332)
T ss_pred hH--------------HHHHHHHHhhcC--CEEEEEcCC
Confidence 32 122344444433 478887764
No 388
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=97.27 E-value=0.0058 Score=50.78 Aligned_cols=73 Identities=15% Similarity=0.184 Sum_probs=55.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcCC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG 144 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ag 144 (252)
+++|+|.||| .=|+.|++.|.++|++|++..-..... . ....+.++.+-+.+ .+.+.+.+.+ ++++||.+..
T Consensus 2 ~~~IlvlgGT-~egr~la~~L~~~g~~v~~Svat~~g~----~-~~~~~~v~~G~l~~-~~~l~~~l~~~~i~~VIDATH 74 (248)
T PRK08057 2 MPRILLLGGT-SEARALARALAAAGVDIVLSLAGRTGG----P-ADLPGPVRVGGFGG-AEGLAAYLREEGIDLVIDATH 74 (248)
T ss_pred CceEEEEech-HHHHHHHHHHHhCCCeEEEEEccCCCC----c-ccCCceEEECCCCC-HHHHHHHHHHCCCCEEEECCC
Confidence 6789999998 679999999999999887765544222 1 22456777787767 7889988875 5999998765
Q ss_pred C
Q 025456 145 F 145 (252)
Q Consensus 145 ~ 145 (252)
+
T Consensus 75 P 75 (248)
T PRK08057 75 P 75 (248)
T ss_pred c
Confidence 4
No 389
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.27 E-value=0.0011 Score=57.57 Aligned_cols=99 Identities=20% Similarity=0.225 Sum_probs=62.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCC--ChHHHHHHHcC-CCcEEEEc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVVCA 142 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d--~~~~~~~~~~~-~~d~vi~~ 142 (252)
+.+|||+||+|++|...++.+...|+.++++..+.++.+ .+........ .|..+ -.+.+++...+ .+|+|+..
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~v---i~y~~~~~~~~v~~~t~g~gvDvv~D~ 218 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHV---INYREEDFVEQVRELTGGKGVDVVLDT 218 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEE---EcCCcccHHHHHHHHcCCCCceEEEEC
Confidence 799999999999999999988888977776666666555 3322222111 12222 13455556554 49999998
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
.|... ....+..++.. ++++.++...
T Consensus 219 vG~~~--------------~~~~l~~l~~~--G~lv~ig~~~ 244 (326)
T COG0604 219 VGGDT--------------FAASLAALAPG--GRLVSIGALS 244 (326)
T ss_pred CCHHH--------------HHHHHHHhccC--CEEEEEecCC
Confidence 87321 12234444443 5888877654
No 390
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.26 E-value=0.00041 Score=56.58 Aligned_cols=39 Identities=41% Similarity=0.571 Sum_probs=34.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT 105 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~ 105 (252)
|+|.|+||+|.+|..+++.|++.|++|++.+|++++.+.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~ 39 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEE 39 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHH
Confidence 479999999999999999999999999999998876543
No 391
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.25 E-value=0.00074 Score=60.52 Aligned_cols=107 Identities=12% Similarity=0.082 Sum_probs=73.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHC-------CC--eEEEeecCchhhhhcc---ccC----CCCeEEEEeeCCCChHHHH
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAK-------GF--AVKAGVRDLDKAKTTL---SKD----NPSLQIVKADVTEGSAKLS 129 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~-------G~--~V~~~~r~~~~~~~~~---~~~----~~~~~~i~~Dl~d~~~~~~ 129 (252)
--+|.|+|++|.+|.+++-.|+.. |. ++++++++.+.++... .+. ..++.+... + .
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~-----y 171 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P-----Y 171 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C-----H
Confidence 468999999999999999999987 64 7888888877654211 100 011211111 1 3
Q ss_pred HHHcCCCcEEEEcCCCCC--CCCCCCcceehHHHHHHHHHHHHh-cCC-CEEEEEc
Q 025456 130 EAIGDDSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRK-RGV-NRFILIS 181 (252)
Q Consensus 130 ~~~~~~~d~vi~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~-~~~-~~~v~~S 181 (252)
+.+.+ .|+||..||... ..+..+.++.|..-...+.+.+++ ++. .++|.+|
T Consensus 172 e~~kd-aDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs 226 (444)
T PLN00112 172 EVFQD-AEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG 226 (444)
T ss_pred HHhCc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence 45777 999999999754 335556678899989999999988 454 3555555
No 392
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.24 E-value=0.01 Score=47.75 Aligned_cols=76 Identities=18% Similarity=0.275 Sum_probs=51.8
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecC---chhhhhc------------------cccCC--CCeEEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRD---LDKAKTT------------------LSKDN--PSLQIVK 118 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~---~~~~~~~------------------~~~~~--~~~~~i~ 118 (252)
.++..+|+|.|+ |++|+.++..|++.|. ++++++++ .+.+... +.... .+++.+.
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~ 96 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD 96 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence 456789999998 8999999999999998 69988887 3222110 00011 2344444
Q ss_pred eeCCCChHHHHHHHcCCCcEEEEc
Q 025456 119 ADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 119 ~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
.+++. +.+.+.+.+ +|+||.+
T Consensus 97 ~~i~~--~~~~~~~~~-~DlVi~a 117 (200)
T TIGR02354 97 EKITE--ENIDKFFKD-ADIVCEA 117 (200)
T ss_pred eeCCH--hHHHHHhcC-CCEEEEC
Confidence 55543 556777777 8999877
No 393
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=97.23 E-value=0.00072 Score=54.57 Aligned_cols=160 Identities=13% Similarity=0.054 Sum_probs=91.2
Q ss_pred CCcEEEEEcCCChHHHHHHH-----HHHHCC----CeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCC
Q 025456 65 KQKKIFVAGATGSSGKRIVE-----QLLAKG----FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDD 135 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~-----~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 135 (252)
+++..+.-+++|+|+..|.. ++-+.+ |+|+++.|.+.+.. +++-+.|..--+-++. .+
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r---------itw~el~~~Gip~sc~---a~- 77 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR---------ITWPELDFPGIPISCV---AG- 77 (315)
T ss_pred ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcc---------cccchhcCCCCceehH---HH-
Confidence 45778888999999988876 444444 78999999876543 3333333222010111 11
Q ss_pred CcEEEEcCCCCCCCCCCCcceehH-----HHHHHHHHHHHhcC--CCEEEEEccceeeccCCCCCCCcchhccch-hhHH
Q 025456 136 SEAVVCATGFQPGWDLFAPWKVDN-----FGTVNLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYIFLNV-FGLT 207 (252)
Q Consensus 136 ~d~vi~~ag~~~~~~~~~~~~~n~-----~g~~~ll~~~~~~~--~~~~v~~SS~~v~~~~~~~~~~~~~~~~~~-~~~y 207 (252)
++++.+|+.-.. ..|...++-|+ ..+..+.++..++. .+.+|.+|..++|-......+++....... +-.-
T Consensus 78 vna~g~n~l~P~-rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~sr 156 (315)
T KOG3019|consen 78 VNAVGNNALLPI-RRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDILSR 156 (315)
T ss_pred HhhhhhhccCch-hhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHHHHH
Confidence 333334443211 12333333333 34788888888765 357999999999977655555544322211 1111
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCcccCCCC
Q 025456 208 LIAKLQAEQYIRKSGINYTIIRPGGLRNEPP 238 (252)
Q Consensus 208 ~~sK~~~e~~~~~~gi~~~~lrPg~i~~~~~ 238 (252)
.+.|+....+.....+++++||.|.+.|.++
T Consensus 157 L~l~WE~aA~~~~~~~r~~~iR~GvVlG~gG 187 (315)
T KOG3019|consen 157 LCLEWEGAALKANKDVRVALIRIGVVLGKGG 187 (315)
T ss_pred HHHHHHHHhhccCcceeEEEEEEeEEEecCC
Confidence 2234433333333469999999999988764
No 394
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.22 E-value=0.0019 Score=56.98 Aligned_cols=75 Identities=11% Similarity=0.164 Sum_probs=55.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
...+|+|+|+ |.+|...++.|...|.+|++++|++++.+........ .+..+..+ .+.+.+.+.+ .|+||++++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~---~v~~~~~~-~~~l~~~l~~-aDvVI~a~~ 239 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG---RIHTRYSN-AYEIEDAVKR-ADLLIGAVL 239 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc---eeEeccCC-HHHHHHHHcc-CCEEEEccc
Confidence 4577999987 9999999999999999999999987765443211111 12334555 6778888888 999999886
Q ss_pred C
Q 025456 145 F 145 (252)
Q Consensus 145 ~ 145 (252)
.
T Consensus 240 ~ 240 (370)
T TIGR00518 240 I 240 (370)
T ss_pred c
Confidence 5
No 395
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.21 E-value=0.0019 Score=55.50 Aligned_cols=105 Identities=15% Similarity=0.118 Sum_probs=67.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhh----cccc--CCCCeEEEEeeCCCChHHHHHHHcCCCcE
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKT----TLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEA 138 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~----~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~ 138 (252)
|+|.|.|+ |.+|..++..|+.+| .+|++++++.+..+. +... ......+.. .| . +.+.+ .|+
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d----~-~~l~~-aDi 70 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GD----Y-ADCKG-ADV 70 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CC----H-HHhCC-CCE
Confidence 47999998 999999999999998 589999998765432 1110 001111111 12 1 34777 999
Q ss_pred EEEcCCCCCC--CCCCCcceehHHHHHHHHHHHHhcCCC-EEEEEc
Q 025456 139 VVCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (252)
Q Consensus 139 vi~~ag~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~S 181 (252)
||.+++.... .+..+.+..|..-...+.+.+++.+.+ .++.++
T Consensus 71 Viita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t 116 (308)
T cd05292 71 VVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT 116 (308)
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999987542 233344566777777788877776543 444443
No 396
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=97.21 E-value=0.0046 Score=53.39 Aligned_cols=96 Identities=22% Similarity=0.210 Sum_probs=65.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
.+++|+|+|+. ++|...++.+...|.+|++++|++++.+...+ -+.+.+ .|-+| ++...+.-+. +|++|.+++
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~---lGAd~~-i~~~~-~~~~~~~~~~-~d~ii~tv~ 238 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK---LGADHV-INSSD-SDALEAVKEI-ADAIIDTVG 238 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH---hCCcEE-EEcCC-chhhHHhHhh-CcEEEECCC
Confidence 48999999985 99999888888899999999999988764332 122222 22224 4444444444 899999987
Q ss_pred CCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 145 ~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
... ....++.++..| +++.++-.
T Consensus 239 -~~~-------------~~~~l~~l~~~G--~~v~vG~~ 261 (339)
T COG1064 239 -PAT-------------LEPSLKALRRGG--TLVLVGLP 261 (339)
T ss_pred -hhh-------------HHHHHHHHhcCC--EEEEECCC
Confidence 321 234556666554 78888754
No 397
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=97.21 E-value=0.0046 Score=49.63 Aligned_cols=107 Identities=22% Similarity=0.309 Sum_probs=65.5
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhc----------------------cccCCCC--eEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSKDNPS--LQIV 117 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~----------------------~~~~~~~--~~~i 117 (252)
.+++.+|+|.|+ |++|.++++.|+..|. ++++++.+.-....+ +....+. ++.+
T Consensus 18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~ 96 (197)
T cd01492 18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD 96 (197)
T ss_pred HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 456789999986 6699999999999996 577776542111110 1111222 3333
Q ss_pred EeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeecc
Q 025456 118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGA 188 (252)
Q Consensus 118 ~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~ 188 (252)
...+.+ ...+.+.+ +|+||.+.. |...-..+-+.|++.++ .+|+.++.+.+|.
T Consensus 97 ~~~~~~---~~~~~~~~-~dvVi~~~~-------------~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~ 149 (197)
T cd01492 97 TDDISE---KPEEFFSQ-FDVVVATEL-------------SRAELVKINELCRKLGV-KFYATGVHGLFGF 149 (197)
T ss_pred ecCccc---cHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEecCCEEE
Confidence 333332 13445667 888886642 22334566788899987 6788777665543
No 398
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.21 E-value=0.001 Score=61.41 Aligned_cols=44 Identities=30% Similarity=0.357 Sum_probs=37.9
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL 107 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~ 107 (252)
.+++++++|+|+ |++|++++..|++.|++|+++.|+.++.+.+.
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la 419 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELA 419 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 356799999998 89999999999999999999999877665543
No 399
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=97.20 E-value=0.0038 Score=58.60 Aligned_cols=73 Identities=21% Similarity=0.282 Sum_probs=58.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHH-HcCCCcEEEEcCC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG 144 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-~~~~~d~vi~~ag 144 (252)
..+|+|.|. |.+|+.+++.|.++|+++++++.+++..+...+ .+..++.+|.+| ++.++++ +++ .|++|-+.+
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~---~g~~v~~GDat~-~~~L~~agi~~-A~~vv~~~~ 473 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRK---YGYKVYYGDATQ-LELLRAAGAEK-AEAIVITCN 473 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh---CCCeEEEeeCCC-HHHHHhcCCcc-CCEEEEEeC
Confidence 467999996 999999999999999999999999887665432 468899999999 7767655 334 888886653
No 400
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.20 E-value=0.0054 Score=52.61 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=64.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC--hHHHHHHHcC-CCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~--~~~~~~~~~~-~~d~vi~ 141 (252)
.+.+++|+|+++.+|..+++.+...|.+|++++++.++.+.... .. ... ..|..+. .+.+.+...+ .+|.+++
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~--~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~ 241 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LG--ADY-VIDYRKEDFVREVRELTGKRGVDVVVE 241 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC--CCe-EEecCChHHHHHHHHHhCCCCCcEEEE
Confidence 46899999999999999999999999999999888765543211 11 111 2344441 1223333322 4899999
Q ss_pred cCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 142 ~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
++|.. .....++.++.. ++++.+++..
T Consensus 242 ~~g~~--------------~~~~~~~~l~~~--G~~v~~~~~~ 268 (342)
T cd08266 242 HVGAA--------------TWEKSLKSLARG--GRLVTCGATT 268 (342)
T ss_pred CCcHH--------------HHHHHHHHhhcC--CEEEEEecCC
Confidence 98731 122344545443 5899887653
No 401
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.19 E-value=0.0013 Score=55.71 Aligned_cols=77 Identities=21% Similarity=0.299 Sum_probs=50.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhccccCCC--CeEEEEeeCCCChHHHHHHHcCCCcEEE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNP--SLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~i~~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
.++++++|.|+ ||.|++++-.|++.|. +|+++.|+.++.+.+...... +...+. ..+ ...+.+.+.. +|+||
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~-~~~~~~~~~~-~divI 199 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVD-ARGIEDVIAA-ADGVV 199 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecC-HhHHHHHHhh-cCEEE
Confidence 45789999997 9999999999999996 788999998777654321111 111111 112 2223334455 89999
Q ss_pred EcCCC
Q 025456 141 CATGF 145 (252)
Q Consensus 141 ~~ag~ 145 (252)
|+...
T Consensus 200 NaTp~ 204 (283)
T PRK14027 200 NATPM 204 (283)
T ss_pred EcCCC
Confidence 98754
No 402
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.19 E-value=0.0024 Score=57.27 Aligned_cols=41 Identities=17% Similarity=0.085 Sum_probs=36.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT 106 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 106 (252)
..++|.|.|. |.+|..++..|+++|++|++.++++++.+.+
T Consensus 2 ~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v~~l 42 (415)
T PRK11064 2 SFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAVDTI 42 (415)
T ss_pred CccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence 3578999985 9999999999999999999999998877653
No 403
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.19 E-value=0.0023 Score=54.65 Aligned_cols=71 Identities=20% Similarity=0.323 Sum_probs=52.6
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
...+++++|+|. |.+|+.++..|.+.|.+|++.+|+++....... .+++++ + .+.+.+.+.+ .|+||++
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~---~G~~~~-----~-~~~l~~~l~~-aDiVI~t 217 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE---MGLSPF-----H-LSELAEEVGK-IDIIFNT 217 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---cCCeee-----c-HHHHHHHhCC-CCEEEEC
Confidence 346899999997 889999999999999999999999765433221 223322 1 2346667777 9999998
Q ss_pred CC
Q 025456 143 TG 144 (252)
Q Consensus 143 ag 144 (252)
+.
T Consensus 218 ~p 219 (296)
T PRK08306 218 IP 219 (296)
T ss_pred CC
Confidence 64
No 404
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.18 E-value=0.0016 Score=58.26 Aligned_cols=75 Identities=17% Similarity=0.307 Sum_probs=55.5
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~ 141 (252)
++.+++++|.|+ |++|+.+++.|.+.|. ++++..|+.++...+..... ... ... .+++.+.+.. .|+||+
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~-~~~-----~~~-~~~l~~~l~~-aDiVI~ 248 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR-NAS-----AHY-LSELPQLIKK-ADIIIA 248 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc-CCe-----Eec-HHHHHHHhcc-CCEEEE
Confidence 467899999997 9999999999999995 79999999877655433111 111 112 3456677888 999999
Q ss_pred cCCCC
Q 025456 142 ATGFQ 146 (252)
Q Consensus 142 ~ag~~ 146 (252)
|.+..
T Consensus 249 aT~a~ 253 (414)
T PRK13940 249 AVNVL 253 (414)
T ss_pred CcCCC
Confidence 98754
No 405
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.17 E-value=0.0079 Score=47.25 Aligned_cols=98 Identities=24% Similarity=0.307 Sum_probs=60.0
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCc---hhhh------------------hccccCCC--CeEEEEeeCCC
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL---DKAK------------------TTLSKDNP--SLQIVKADVTE 123 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~---~~~~------------------~~~~~~~~--~~~~i~~Dl~d 123 (252)
+|+|.|+ |++|.++++.|++.|. ++++++.+. +.+. +.+....+ +++.+...+..
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 5889996 9999999999999997 588888764 1111 00111122 33444444433
Q ss_pred ChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhc-CCCEEEEEccc
Q 025456 124 GSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSI 183 (252)
Q Consensus 124 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~ 183 (252)
+.+.+.+++ +|+||.+.. |...-..+.+.+.+. ++ .+|+.+..
T Consensus 80 --~~~~~~l~~-~DlVi~~~d-------------~~~~r~~i~~~~~~~~~i-p~i~~~~~ 123 (174)
T cd01487 80 --NNLEGLFGD-CDIVVEAFD-------------NAETKAMLAESLLGNKNK-PVVCASGM 123 (174)
T ss_pred --hhHHHHhcC-CCEEEECCC-------------CHHHHHHHHHHHHHHCCC-CEEEEehh
Confidence 456677777 999988743 222234466666665 65 56665433
No 406
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.17 E-value=0.0021 Score=51.78 Aligned_cols=72 Identities=18% Similarity=0.257 Sum_probs=49.0
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh-hhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-KTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~ 141 (252)
++++++++|.|| |-+|...++.|++.|++|+++.+..... .+... ...+.+..-++.. ..+.+ .|+||-
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~--~~~i~~~~~~~~~------~~l~~-adlVia 76 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVE--EGKIRWKQKEFEP------SDIVD-AFLVIA 76 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh--CCCEEEEecCCCh------hhcCC-ceEEEE
Confidence 457999999998 9999999999999999999988764322 22221 1345554433322 23556 888876
Q ss_pred cCC
Q 025456 142 ATG 144 (252)
Q Consensus 142 ~ag 144 (252)
+.+
T Consensus 77 aT~ 79 (202)
T PRK06718 77 ATN 79 (202)
T ss_pred cCC
Confidence 643
No 407
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=97.17 E-value=0.0026 Score=57.52 Aligned_cols=77 Identities=13% Similarity=0.283 Sum_probs=55.0
Q ss_pred ccCCCcEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCCh
Q 025456 62 VSVKQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS 125 (252)
Q Consensus 62 ~~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~ 125 (252)
.+++|++|+||+| ||-.|.+|++.+..+|++|+++.-..+ . . ...+++++.++= .
T Consensus 252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~----~-~p~~v~~i~V~t---a 322 (475)
T PRK13982 252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L----A-DPQGVKVIHVES---A 322 (475)
T ss_pred cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C----C-CCCCceEEEecC---H
Confidence 3578999999987 799999999999999999998874322 1 1 224577766543 3
Q ss_pred HHHHHHHcC--CCcEEEEcCCCCC
Q 025456 126 AKLSEAIGD--DSEAVVCATGFQP 147 (252)
Q Consensus 126 ~~~~~~~~~--~~d~vi~~ag~~~ 147 (252)
+++.+++.. +.|++|++|++..
T Consensus 323 ~eM~~av~~~~~~Di~I~aAAVaD 346 (475)
T PRK13982 323 RQMLAAVEAALPADIAIFAAAVAD 346 (475)
T ss_pred HHHHHHHHhhCCCCEEEEeccccc
Confidence 333333322 3799999998754
No 408
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.17 E-value=0.0017 Score=55.83 Aligned_cols=37 Identities=19% Similarity=0.202 Sum_probs=33.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhh
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK 104 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~ 104 (252)
++|.|+| .|.+|..++..|+++|++|++.+|+++..+
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~ 39 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAA 39 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHH
Confidence 5799999 699999999999999999999999976544
No 409
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.14 E-value=0.004 Score=57.98 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=57.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
..+++|.|+ |-+|++++++|.++|++|++++.++++.++..+ .+...+.+|.+| ++.++++--++.|.++-+.+
T Consensus 417 ~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~---~g~~~i~GD~~~-~~~L~~a~i~~a~~viv~~~ 490 (558)
T PRK10669 417 CNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE---RGIRAVLGNAAN-EEIMQLAHLDCARWLLLTIP 490 (558)
T ss_pred CCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---CCCeEEEcCCCC-HHHHHhcCccccCEEEEEcC
Confidence 357888986 999999999999999999999999887665432 478999999999 67666542223888775543
No 410
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.14 E-value=0.0036 Score=53.74 Aligned_cols=105 Identities=16% Similarity=0.180 Sum_probs=71.1
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCC--eEEEeecCchhhhhc---ccc-C----CCCeEEEEeeCCCChHHHHHHHcCCCc
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTT---LSK-D----NPSLQIVKADVTEGSAKLSEAIGDDSE 137 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~---~~~-~----~~~~~~i~~Dl~d~~~~~~~~~~~~~d 137 (252)
+|.|.|+ |.+|..++..|+.+|. ++++++.+.+..+.. +.+ . ..++.+...| .+.+.+ .|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~--------y~~~~~-aD 70 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD--------YDDCAD-AD 70 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC--------HHHhCC-CC
Confidence 5789998 9999999999998874 799999876544321 111 0 1133333222 245777 99
Q ss_pred EEEEcCCCCCC--CC--CCCcceehHHHHHHHHHHHHhcCCCEEEEEcc
Q 025456 138 AVVCATGFQPG--WD--LFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (252)
Q Consensus 138 ~vi~~ag~~~~--~~--~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS 182 (252)
+||.+||.... .+ ..+.+..|..-.+.+.+.+++.+..-++.+-|
T Consensus 71 ivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs 119 (307)
T cd05290 71 IIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT 119 (307)
T ss_pred EEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 99999997542 23 35667889988999999998887544444433
No 411
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.13 E-value=0.0074 Score=52.65 Aligned_cols=26 Identities=23% Similarity=0.521 Sum_probs=24.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGF 91 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~ 91 (252)
..+|.|.||||++|+++++.|.++++
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~h 32 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDF 32 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCC
Confidence 57899999999999999999999776
No 412
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=97.12 E-value=0.0097 Score=48.61 Aligned_cols=104 Identities=23% Similarity=0.317 Sum_probs=65.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhh----------------------hhccccCCCCeEEEEee
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKA----------------------KTTLSKDNPSLQIVKAD 120 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~----------------------~~~~~~~~~~~~~i~~D 120 (252)
++.-+|+|.|. |++|++.++.|++-|. ++++++.+.=.. ++.+....+.+++...|
T Consensus 28 l~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~ 106 (263)
T COG1179 28 LKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN 106 (263)
T ss_pred HhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH
Confidence 35679999997 9999999999999985 677666542110 00111123444444433
Q ss_pred -CCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEcccee
Q 025456 121 -VTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILV 185 (252)
Q Consensus 121 -l~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v 185 (252)
.-. ++.+.+.+...+|.||.+.- |+..-..|++.|+++++ . ++||.++
T Consensus 107 ~f~t-~en~~~~~~~~~DyvIDaiD-------------~v~~Kv~Li~~c~~~ki-~--vIss~Ga 155 (263)
T COG1179 107 DFIT-EENLEDLLSKGFDYVIDAID-------------SVRAKVALIAYCRRNKI-P--VISSMGA 155 (263)
T ss_pred hhhC-HhHHHHHhcCCCCEEEEchh-------------hhHHHHHHHHHHHHcCC-C--EEeeccc
Confidence 223 56666666555888887753 34455688999999886 3 4555544
No 413
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.11 E-value=0.0022 Score=55.60 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=60.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhccccCCCCeEEEEeeCCCC--hHHHHHHHcCCCcEEEEc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~--~~~~~~~~~~~~d~vi~~ 142 (252)
+.+|+|+||+|.+|..+++.+...|. +|+++++++++.+...... +++.+ .|..+. .+.+.+...+.+|+||++
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l--Ga~~v-i~~~~~~~~~~i~~~~~~gvd~vid~ 231 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL--GFDAA-INYKTDNVAERLRELCPEGVDVYFDN 231 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc--CCcEE-EECCCCCHHHHHHHHCCCCceEEEEC
Confidence 38999999999999999988888898 7999888876654322111 12221 232221 233443332239999998
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
.|.. .....++.++.. +++|.++..
T Consensus 232 ~g~~--------------~~~~~~~~l~~~--G~iv~~G~~ 256 (345)
T cd08293 232 VGGE--------------ISDTVISQMNEN--SHIILCGQI 256 (345)
T ss_pred CCcH--------------HHHHHHHHhccC--CEEEEEeee
Confidence 8731 112344444444 478877643
No 414
>PRK07411 hypothetical protein; Validated
Probab=97.11 E-value=0.0073 Score=53.65 Aligned_cols=105 Identities=15% Similarity=0.177 Sum_probs=66.2
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhh----------------------ccccCCC--CeEE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSKDNP--SLQI 116 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~----------------------~~~~~~~--~~~~ 116 (252)
..++..+|+|.|+ |++|.++++.|+..|. ++++++.+.=.... .+....+ +++.
T Consensus 34 ~~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~ 112 (390)
T PRK07411 34 KRLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDL 112 (390)
T ss_pred HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEE
Confidence 3456789999997 8999999999999996 57776664211110 0111122 3444
Q ss_pred EEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 117 i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
+...++. +...+.+.+ +|+||.|.. |...-..+-++|.+.++ .+|+.+..+
T Consensus 113 ~~~~~~~--~~~~~~~~~-~D~Vvd~~d-------------~~~~r~~ln~~~~~~~~-p~v~~~~~g 163 (390)
T PRK07411 113 YETRLSS--ENALDILAP-YDVVVDGTD-------------NFPTRYLVNDACVLLNK-PNVYGSIFR 163 (390)
T ss_pred EecccCH--HhHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEEcc
Confidence 4444543 445667787 999998864 23333456677888875 566655443
No 415
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=97.10 E-value=0.0024 Score=55.69 Aligned_cols=78 Identities=14% Similarity=0.117 Sum_probs=49.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc--C-CCcEEE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--D-DSEAVV 140 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~-~~d~vi 140 (252)
.+++.|||.||+|++|++.++.+...|..+++..++.+..+.... . +.+ ...|..+ ++-+++..+ + .+|+|+
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~-l--GAd-~vvdy~~-~~~~e~~kk~~~~~~DvVl 230 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK-L--GAD-EVVDYKD-ENVVELIKKYTGKGVDVVL 230 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH-c--CCc-EeecCCC-HHHHHHHHhhcCCCccEEE
Confidence 358899999999999999999888889444444555444332211 1 111 1346666 443443333 2 499999
Q ss_pred EcCCCC
Q 025456 141 CATGFQ 146 (252)
Q Consensus 141 ~~ag~~ 146 (252)
.|+|..
T Consensus 231 D~vg~~ 236 (347)
T KOG1198|consen 231 DCVGGS 236 (347)
T ss_pred ECCCCC
Confidence 999864
No 416
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=97.08 E-value=0.0058 Score=57.61 Aligned_cols=74 Identities=23% Similarity=0.288 Sum_probs=58.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
..+|+|.|. |.+|+.+++.|.++|.++++++.+++..+.... .+..++.+|.+| ++-++++=-++.|.||-+..
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~---~g~~v~~GDat~-~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK---FGMKVFYGDATR-MDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh---cCCeEEEEeCCC-HHHHHhcCCCcCCEEEEEeC
Confidence 468999997 999999999999999999999999887765432 468899999999 77666542224888887653
No 417
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.06 E-value=0.0036 Score=53.12 Aligned_cols=101 Identities=15% Similarity=0.163 Sum_probs=65.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
.++++.|+|+.| +|.--++...+.|++|+++++...+.++.+.. -+.+.+ .|-+++++.++++.+. .|.++|++.
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~--LGAd~f-v~~~~d~d~~~~~~~~-~dg~~~~v~ 255 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKS--LGADVF-VDSTEDPDIMKAIMKT-TDGGIDTVS 255 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHh--cCccee-EEecCCHHHHHHHHHh-hcCcceeee
Confidence 589999999977 99877776667899999999987665554432 233333 3445226777777665 666666654
Q ss_pred CCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 145 ~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
..... ....+++.+|..| ++|+++-.
T Consensus 256 ~~a~~-----------~~~~~~~~lk~~G--t~V~vg~p 281 (360)
T KOG0023|consen 256 NLAEH-----------ALEPLLGLLKVNG--TLVLVGLP 281 (360)
T ss_pred ecccc-----------chHHHHHHhhcCC--EEEEEeCc
Confidence 11110 1234566667654 78888754
No 418
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.04 E-value=0.0051 Score=55.49 Aligned_cols=67 Identities=28% Similarity=0.353 Sum_probs=46.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
|+|.|.||+|.+|..+++.|.+.|++|++.+|+++...+.... .++. ..+ ...+.+.+ .|+||.+..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~--~gv~-----~~~---~~~e~~~~-aDvVIlavp 67 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE--LGVE-----YAN---DNIDAAKD-ADIVIISVP 67 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH--cCCe-----ecc---CHHHHhcc-CCEEEEecC
Confidence 4799999999999999999999999999999987654322211 1221 111 13344556 788887764
No 419
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.03 E-value=0.005 Score=53.03 Aligned_cols=107 Identities=19% Similarity=0.162 Sum_probs=69.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhhc---cccCC---CCeEEEEeeCCCChHHHHHHHcCCCc
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTT---LSKDN---PSLQIVKADVTEGSAKLSEAIGDDSE 137 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~---~~~~~---~~~~~i~~Dl~d~~~~~~~~~~~~~d 137 (252)
.++|.|+|+ |.+|..++-.|+..| .++++++.+.+..+.. +.+.. ....+... .| .+ .+.+ .|
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~d----y~-~~~~-ad 73 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KD----YS-VTAN-SK 73 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CC----HH-HhCC-CC
Confidence 469999996 999999999998877 4788888876544321 11110 11122210 12 22 3677 99
Q ss_pred EEEEcCCCCCC--CCCCCcceehHHHHHHHHHHHHhcCC-CEEEEEc
Q 025456 138 AVVCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGV-NRFILIS 181 (252)
Q Consensus 138 ~vi~~ag~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~v~~S 181 (252)
+||.+||.... .+..+.+..|..-.+.+.+.+++.+. ..++.+|
T Consensus 74 ivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 120 (312)
T cd05293 74 VVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS 120 (312)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence 99999997542 34445567888878888888877754 3455555
No 420
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=97.03 E-value=0.011 Score=49.06 Aligned_cols=75 Identities=27% Similarity=0.399 Sum_probs=52.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF 145 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ag~ 145 (252)
|+|+|.||| .=|+.|++.|.++|+ |++.+-..- ..+........+.++.+-+.+ .+.+.+.+.+ .++.||.+..+
T Consensus 1 m~ILvlgGT-tE~r~la~~L~~~g~-v~~sv~t~~-g~~~~~~~~~~~~v~~G~lg~-~~~l~~~l~~~~i~~vIDATHP 76 (249)
T PF02571_consen 1 MKILVLGGT-TEGRKLAERLAEAGY-VIVSVATSY-GGELLKPELPGLEVRVGRLGD-EEGLAEFLRENGIDAVIDATHP 76 (249)
T ss_pred CEEEEEech-HHHHHHHHHHHhcCC-EEEEEEhhh-hHhhhccccCCceEEECCCCC-HHHHHHHHHhCCCcEEEECCCc
Confidence 689999998 678999999999998 554333222 222221122456777787767 7888888864 59999987644
No 421
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.03 E-value=0.0029 Score=53.66 Aligned_cols=56 Identities=23% Similarity=0.296 Sum_probs=44.5
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
+.++++|+|.|++|.+|+.++..|+++|..|++..|.. ..+.+.+.+ .|+||++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-------------------------~~L~~~~~~-aDIvI~A 209 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-------------------------QNLPELVKQ-ADIIVGA 209 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-------------------------hhHHHHhcc-CCEEEEc
Confidence 46799999999998999999999999999888776521 123344566 8889888
Q ss_pred CC
Q 025456 143 TG 144 (252)
Q Consensus 143 ag 144 (252)
.|
T Consensus 210 tG 211 (283)
T PRK14192 210 VG 211 (283)
T ss_pred cC
Confidence 86
No 422
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.02 E-value=0.0061 Score=52.69 Aligned_cols=108 Identities=18% Similarity=0.186 Sum_probs=68.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhh-ccc---c---CCCCeEEEEeeCCCChHHHHHHHcCCC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT-TLS---K---DNPSLQIVKADVTEGSAKLSEAIGDDS 136 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~-~~~---~---~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 136 (252)
+.++|.|.|+ |.+|..++..++..|. +|++++++++.... .++ . ......+.. -+| . +.+.+ .
T Consensus 5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d----~-~~l~~-a 75 (321)
T PTZ00082 5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNN----Y-EDIAG-S 75 (321)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCC----H-HHhCC-C
Confidence 3579999995 9999999999999895 89999988764321 010 0 011122221 012 2 35678 9
Q ss_pred cEEEEcCCCCCCC-------CCCCcceehHHHHHHHHHHHHhcCCC-EEEEEc
Q 025456 137 EAVVCATGFQPGW-------DLFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (252)
Q Consensus 137 d~vi~~ag~~~~~-------~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~S 181 (252)
|+||.++|..... +..+.+..|..-...+.+.+.+...+ .++.+|
T Consensus 76 DiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s 128 (321)
T PTZ00082 76 DVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT 128 (321)
T ss_pred CEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999999875421 22234456776677777777766544 566655
No 423
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=97.02 E-value=0.0034 Score=53.87 Aligned_cols=112 Identities=17% Similarity=0.099 Sum_probs=68.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhc-cccCCCC-eEEEEeeCCCChHHHHHHHcCCCcEEEEcC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT-LSKDNPS-LQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~-~~~~~~~-~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~a 143 (252)
++|.|.|+ |.+|..++..|+.+|. +|+++++..+..... .+..... .......+.- ..+..+ +.+ .|+||.++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~-t~d~~~-~~~-aDiVIita 77 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG-TNNYAD-TAN-SDIVVITA 77 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe-cCCHHH-hCC-CCEEEEcC
Confidence 58999997 9999999999999886 899999865533211 1000000 0000111110 112333 567 99999999
Q ss_pred CCCCCC--CCCCcceehHHHHHHHHHHHHhcCC-CEEEEEcc
Q 025456 144 GFQPGW--DLFAPWKVDNFGTVNLVEACRKRGV-NRFILISS 182 (252)
Q Consensus 144 g~~~~~--~~~~~~~~n~~g~~~ll~~~~~~~~-~~~v~~SS 182 (252)
|..... +..+.+..|..-.+.+++.+++.+. ..+|.+|-
T Consensus 78 g~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 78 GLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 965422 2334456788888888888876653 34555553
No 424
>PLN02602 lactate dehydrogenase
Probab=97.01 E-value=0.0023 Score=55.85 Aligned_cols=106 Identities=17% Similarity=0.242 Sum_probs=69.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCC--eEEEeecCchhhhhcc---ccC---CCCeEEEEeeCCCChHHHHHHHcCCCcE
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTL---SKD---NPSLQIVKADVTEGSAKLSEAIGDDSEA 138 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~---~~~---~~~~~~i~~Dl~d~~~~~~~~~~~~~d~ 138 (252)
++|.|+|+ |.+|..++-.|+..|. ++++++.+.+..+... .+. .....+ ..+ .| . +.+.+ .|+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~d----y-~~~~d-aDi 108 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TD----Y-AVTAG-SDL 108 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CC----H-HHhCC-CCE
Confidence 69999996 9999999999988774 7898998776543211 100 111222 211 12 1 23677 999
Q ss_pred EEEcCCCCC--CCCCCCcceehHHHHHHHHHHHHhcCC-CEEEEEc
Q 025456 139 VVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGV-NRFILIS 181 (252)
Q Consensus 139 vi~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~v~~S 181 (252)
||.+||... ..+..+.+..|..-...+.+.+++.+. ..+|.+|
T Consensus 109 VVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 109 CIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 999999754 234445667788778888888877754 3455555
No 425
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=97.01 E-value=0.0055 Score=51.29 Aligned_cols=66 Identities=24% Similarity=0.317 Sum_probs=42.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHC-CCeEEEee-cCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAK-GFAVKAGV-RDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~-r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
++|.|+|++|.+|+.+++.+.+. +.+++.+. ++++..... -..++.. .+++.+.+.+ +|+||.++.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~----------~~~~i~~-~~dl~~ll~~-~DvVid~t~ 69 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ----------GALGVAI-TDDLEAVLAD-ADVLIDFTT 69 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc----------CCCCccc-cCCHHHhccC-CCEEEECCC
Confidence 68999999999999999988874 67877654 443322111 1112222 2335555666 899988764
No 426
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=97.00 E-value=0.0031 Score=50.09 Aligned_cols=110 Identities=23% Similarity=0.236 Sum_probs=54.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCC----CCeE-EEE-----eeCCCChHHHHHHHcCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN----PSLQ-IVK-----ADVTEGSAKLSEAIGDDS 136 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~-~i~-----~Dl~d~~~~~~~~~~~~~ 136 (252)
|+|.|.| .|++|..++..|++.|++|++++.++++.+.+..+.. +++. .+. +.+.- ..+..+++.. .
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~-t~~~~~ai~~-a 77 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRA-TTDIEEAIKD-A 77 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEE-ESEHHHHHHH--
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchh-hhhhhhhhhc-c
Confidence 6888997 5999999999999999999999999887665433211 0000 000 00000 1223344555 8
Q ss_pred cEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhc-CCCEEEEEccc
Q 025456 137 EAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSI 183 (252)
Q Consensus 137 d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~ 183 (252)
|++|-|.+.....+. ..|+.....+++...+. .-+.+|.+-|.
T Consensus 78 dv~~I~VpTP~~~~~----~~Dls~v~~a~~~i~~~l~~~~lvV~~ST 121 (185)
T PF03721_consen 78 DVVFICVPTPSDEDG----SPDLSYVESAIESIAPVLRPGDLVVIEST 121 (185)
T ss_dssp SEEEE----EBETTT----SBETHHHHHHHHHHHHHHCSCEEEEESSS
T ss_pred ceEEEecCCCccccC----CccHHHHHHHHHHHHHHHhhcceEEEccE
Confidence 999999876443221 22344444444444322 22355555443
No 427
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.00 E-value=0.011 Score=42.07 Aligned_cols=90 Identities=20% Similarity=0.301 Sum_probs=58.8
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
++++++++|+|| |-+|..=++.|++.|.+|++++......+ ..+++..-++ .+.+.+ .+.||-+
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~~-------~~i~~~~~~~-------~~~l~~-~~lV~~a 67 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFSE-------GLIQLIRREF-------EEDLDG-ADLVFAA 67 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHHH-------TSCEEEESS--------GGGCTT-ESEEEE-
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhhh-------hHHHHHhhhH-------HHHHhh-heEEEec
Confidence 457999999998 99999999999999999999988751111 2344433222 234667 8888855
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
.+- -.-...+.+.|++.+ .+|++...
T Consensus 68 t~d-------------~~~n~~i~~~a~~~~--i~vn~~D~ 93 (103)
T PF13241_consen 68 TDD-------------PELNEAIYADARARG--ILVNVVDD 93 (103)
T ss_dssp SS--------------HHHHHHHHHHHHHTT--SEEEETT-
T ss_pred CCC-------------HHHHHHHHHHHhhCC--EEEEECCC
Confidence 431 122356777888776 47787654
No 428
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.99 E-value=0.0018 Score=54.78 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=65.9
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhhccccCCCCeEEEE-eeCCCChHHHHHHHcCCCcEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVK-ADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~i~-~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
..++++++|.|| ||.+++++..|++.| .+|+++.|+.++.+++..........+. .++.+ .+... . .|+||
T Consensus 123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~-~~~~~----~-~dliI 195 (283)
T COG0169 123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALAD-LEGLE----E-ADLLI 195 (283)
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccc-ccccc----c-cCEEE
Confidence 335799999997 999999999999999 5799999999887665432111111111 22222 11111 4 89999
Q ss_pred EcCCCCCCCC--C-----------CCcceehHHH-HHHHHHHHHhcCCC
Q 025456 141 CATGFQPGWD--L-----------FAPWKVDNFG-TVNLVEACRKRGVN 175 (252)
Q Consensus 141 ~~ag~~~~~~--~-----------~~~~~~n~~g-~~~ll~~~~~~~~~ 175 (252)
|+........ . .-.+++++.- -..+++.|+++|.+
T Consensus 196 NaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~ 244 (283)
T COG0169 196 NATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK 244 (283)
T ss_pred ECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence 9875432111 0 0123444442 45688889988874
No 429
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=96.96 E-value=0.0039 Score=53.57 Aligned_cols=99 Identities=19% Similarity=0.151 Sum_probs=61.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC--hHHHHHHHcCCCcEEEEc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~--~~~~~~~~~~~~d~vi~~ 142 (252)
.+.+|+|+||+|.+|..+++.+...|.+|+++++++++.+.... . +++.+ .|..++ .+.+.+...+.+|+|+++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~--Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~ 218 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L--GFDAV-FNYKTVSLEEALKEAAPDGIDCYFDN 218 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--CCCEE-EeCCCccHHHHHHHHCCCCcEEEEEC
Confidence 47899999999999999998888899999998888766544322 1 22211 233321 223333332238999998
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
.|.. .....++.++.. ++++.++..
T Consensus 219 ~g~~--------------~~~~~~~~l~~~--G~iv~~g~~ 243 (329)
T cd08294 219 VGGE--------------FSSTVLSHMNDF--GRVAVCGSI 243 (329)
T ss_pred CCHH--------------HHHHHHHhhccC--CEEEEEcch
Confidence 7721 122334444433 478887654
No 430
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=96.95 E-value=0.01 Score=54.29 Aligned_cols=104 Identities=14% Similarity=0.103 Sum_probs=66.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC-------------h--HHHH
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-------------S--AKLS 129 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~-------------~--~~~~ 129 (252)
.+.+|+|+|+ |-+|...+..+...|.+|+++++++++.+.... -+.+++..|..+. . +...
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes---lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES---MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---cCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 4789999997 999999999999999999999999877654322 2344443333220 0 1112
Q ss_pred HH----HcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEcc
Q 025456 130 EA----IGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (252)
Q Consensus 130 ~~----~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS 182 (252)
+. .++ +|+||.+++......+. . -+...++.++.- +.+|.++.
T Consensus 240 ~~~~~~~~g-aDVVIetag~pg~~aP~-l------it~~~v~~mkpG--gvIVdvg~ 286 (509)
T PRK09424 240 ALFAEQAKE-VDIIITTALIPGKPAPK-L------ITAEMVASMKPG--SVIVDLAA 286 (509)
T ss_pred HHHHhccCC-CCEEEECCCCCcccCcc-h------HHHHHHHhcCCC--CEEEEEcc
Confidence 22 245 99999999874422221 1 134455555533 36888775
No 431
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.94 E-value=0.0036 Score=56.29 Aligned_cols=73 Identities=26% Similarity=0.443 Sum_probs=53.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
..+++|+|+|+ |.+|..+++.|...|. +|++..|++++...+....+ . +..+ .+++.+.+.+ .|+||.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g--~-----~~~~-~~~~~~~l~~-aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG--G-----EAIP-LDELPEALAE-ADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC--C-----cEee-HHHHHHHhcc-CCEEEEC
Confidence 56899999997 9999999999999997 79999998877654332111 1 1222 3445666777 9999999
Q ss_pred CCCC
Q 025456 143 TGFQ 146 (252)
Q Consensus 143 ag~~ 146 (252)
.+..
T Consensus 250 T~s~ 253 (423)
T PRK00045 250 TGAP 253 (423)
T ss_pred CCCC
Confidence 7643
No 432
>PRK14852 hypothetical protein; Provisional
Probab=96.91 E-value=0.01 Score=57.88 Aligned_cols=107 Identities=15% Similarity=0.151 Sum_probs=68.3
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhh----------------------hccccCCC--CeEE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAK----------------------TTLSKDNP--SLQI 116 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~--~~~~ 116 (252)
..+++.+|+|.|+ ||+|..++..|+..|. ++++++.+.=... +.+....+ +++.
T Consensus 328 ~kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~ 406 (989)
T PRK14852 328 RRLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRS 406 (989)
T ss_pred HHHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEE
Confidence 4567899999996 8999999999999986 5666665421110 00111223 3444
Q ss_pred EEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 117 i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
+...++ .+.+.+.+.+ +|+||.+.... ....-..+.+.|++.++ .+|+.++.+
T Consensus 407 ~~~~I~--~en~~~fl~~-~DiVVDa~D~~-----------~~~~rr~l~~~c~~~~I-P~I~ag~~G 459 (989)
T PRK14852 407 FPEGVA--AETIDAFLKD-VDLLVDGIDFF-----------ALDIRRRLFNRALELGI-PVITAGPLG 459 (989)
T ss_pred EecCCC--HHHHHHHhhC-CCEEEECCCCc-----------cHHHHHHHHHHHHHcCC-CEEEeeccc
Confidence 444453 4667788888 99999775321 12233567777888887 577766643
No 433
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=96.89 E-value=0.0063 Score=52.13 Aligned_cols=104 Identities=21% Similarity=0.206 Sum_probs=68.6
Q ss_pred EEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhhcccc---C-C--CCeEEEEeeCCCChHHHHHHHcCCCcEEE
Q 025456 69 IFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSK---D-N--PSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~---~-~--~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
|.|.|+ |.+|..++-.|+..| .++++++++.+..+....+ . . ....+. .++ + .+.+.+ .|+||
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~---~~~--~--~~~l~~-aDiVI 71 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIV---RGG--D--YADAAD-ADIVV 71 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEE---ECC--C--HHHhCC-CCEEE
Confidence 468886 899999999999988 6899999987655432111 0 0 111221 122 1 246778 99999
Q ss_pred EcCCCCC--CCCCCCcceehHHHHHHHHHHHHhcCCC-EEEEEc
Q 025456 141 CATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (252)
Q Consensus 141 ~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~S 181 (252)
.++|... ..+..+.+..|+.-...+.+.+++.+.+ .++.+|
T Consensus 72 itag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s 115 (300)
T cd00300 72 ITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS 115 (300)
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 9999754 2344455677888888888888877643 455544
No 434
>PRK14851 hypothetical protein; Provisional
Probab=96.88 E-value=0.012 Score=55.86 Aligned_cols=104 Identities=13% Similarity=0.166 Sum_probs=66.5
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhh---h-------------------hccccCC--CCeEE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKA---K-------------------TTLSKDN--PSLQI 116 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~---~-------------------~~~~~~~--~~~~~ 116 (252)
..+++.+|+|.|+ |++|.+++..|+..|. ++++++.+.=.. . +.+.... .+++.
T Consensus 39 ~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~ 117 (679)
T PRK14851 39 ERLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITP 117 (679)
T ss_pred HHHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEE
Confidence 3456899999996 9999999999999996 566666542111 0 0011112 24555
Q ss_pred EEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEc
Q 025456 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILIS 181 (252)
Q Consensus 117 i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~S 181 (252)
+...++. +.+.+.+.+ +|+||.+.-.. .+..-..+.+.|++.++ .+|+.+
T Consensus 118 ~~~~i~~--~n~~~~l~~-~DvVid~~D~~-----------~~~~r~~l~~~c~~~~i-P~i~~g 167 (679)
T PRK14851 118 FPAGINA--DNMDAFLDG-VDVVLDGLDFF-----------QFEIRRTLFNMAREKGI-PVITAG 167 (679)
T ss_pred EecCCCh--HHHHHHHhC-CCEEEECCCCC-----------cHHHHHHHHHHHHHCCC-CEEEee
Confidence 5556643 567788888 99999775310 12233467778888887 465554
No 435
>PLN00203 glutamyl-tRNA reductase
Probab=96.88 E-value=0.004 Score=57.15 Aligned_cols=75 Identities=20% Similarity=0.338 Sum_probs=54.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
+.+++|+|.|+ |.+|..+++.|...|. +|+++.|+.++...+.... .+..+...+ .+++.+.+.+ .|+||.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~-~g~~i~~~~----~~dl~~al~~-aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF-PDVEIIYKP----LDEMLACAAE-ADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh-CCCceEeec----HhhHHHHHhc-CCEEEEc
Confidence 56899999998 9999999999999996 7999999987766543311 122221112 3345667777 9999988
Q ss_pred CCC
Q 025456 143 TGF 145 (252)
Q Consensus 143 ag~ 145 (252)
.+.
T Consensus 337 T~s 339 (519)
T PLN00203 337 TSS 339 (519)
T ss_pred cCC
Confidence 754
No 436
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.87 E-value=0.0047 Score=53.16 Aligned_cols=73 Identities=27% Similarity=0.392 Sum_probs=52.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
..+++|+|.|+ |.+|..+++.|...| .+|+++.|++++........+ ... .+ .+++.+.+.+ .|+||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g--~~~-----~~-~~~~~~~l~~-aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG--GNA-----VP-LDELLELLNE-ADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC--CeE-----Ee-HHHHHHHHhc-CCEEEEC
Confidence 46899999997 999999999999876 689999998876654332111 122 22 3446667777 9999999
Q ss_pred CCCC
Q 025456 143 TGFQ 146 (252)
Q Consensus 143 ag~~ 146 (252)
.+..
T Consensus 246 t~~~ 249 (311)
T cd05213 246 TGAP 249 (311)
T ss_pred CCCC
Confidence 8743
No 437
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.86 E-value=0.017 Score=50.70 Aligned_cols=74 Identities=22% Similarity=0.227 Sum_probs=49.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
.+.+|+|.|+ |.+|..+++.+...|.+|++++.+.++........ +++.+ .|..+ .+.+.+...+ +|+||.+.|
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~--Ga~~v-i~~~~-~~~~~~~~~~-~D~vid~~g 256 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL--GADSF-LVSTD-PEKMKAAIGT-MDYIIDTVS 256 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC--CCcEE-EcCCC-HHHHHhhcCC-CCEEEECCC
Confidence 4789999775 99999999988888999888777665433222111 22221 23333 3445555556 999999987
No 438
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=96.85 E-value=0.0057 Score=51.92 Aligned_cols=76 Identities=13% Similarity=0.170 Sum_probs=52.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC--hHHHHHHHcC-CCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~--~~~~~~~~~~-~~d~vi~ 141 (252)
.+++++|+|++|.+|..+++.+...|.+|++++++.++.+.... . ++.. ..|..+. .+.+.+...+ .+|.+++
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~--g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~ 219 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-A--GADA-VFNYRAEDLADRILAATAGQGVDVIIE 219 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--CCCE-EEeCCCcCHHHHHHHHcCCCceEEEEE
Confidence 47899999999999999999999999999999888765543321 1 2221 1343331 1334344332 4999999
Q ss_pred cCC
Q 025456 142 ATG 144 (252)
Q Consensus 142 ~ag 144 (252)
++|
T Consensus 220 ~~~ 222 (325)
T cd08253 220 VLA 222 (325)
T ss_pred CCc
Confidence 986
No 439
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.84 E-value=0.0075 Score=51.33 Aligned_cols=80 Identities=21% Similarity=0.284 Sum_probs=50.2
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCch---hhhhccccCCC--CeEEEEeeCCCChHHHHHHHcCCC
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLD---KAKTTLSKDNP--SLQIVKADVTEGSAKLSEAIGDDS 136 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~---~~~~~~~~~~~--~~~~i~~Dl~d~~~~~~~~~~~~~ 136 (252)
+.++++++|.|+ |+.+++++-.|+..|. +|+++.|+.+ +.+.+...... ...+...++.+ .+.+.+.+.+ .
T Consensus 121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-a 197 (288)
T PRK12749 121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD-QQAFAEALAS-A 197 (288)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhh-hhhhhhhccc-C
Confidence 346789999997 8889999999999985 7999999853 44333221111 11111122222 2234445566 9
Q ss_pred cEEEEcCCC
Q 025456 137 EAVVCATGF 145 (252)
Q Consensus 137 d~vi~~ag~ 145 (252)
|+|||+..+
T Consensus 198 DivINaTp~ 206 (288)
T PRK12749 198 DILTNGTKV 206 (288)
T ss_pred CEEEECCCC
Confidence 999998643
No 440
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.83 E-value=0.0053 Score=55.05 Aligned_cols=73 Identities=27% Similarity=0.400 Sum_probs=53.3
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~ 141 (252)
...+++++|+|+ |.+|..+++.|...| .+|+++.|+.++......... ...+ + .+++.+.+.+ .|+||.
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g--~~~i-----~-~~~l~~~l~~-aDvVi~ 246 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG--GEAV-----K-FEDLEEYLAE-ADIVIS 246 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--CeEe-----e-HHHHHHHHhh-CCEEEE
Confidence 356899999997 999999999999999 789999998876544332111 1111 2 2446667777 999999
Q ss_pred cCCC
Q 025456 142 ATGF 145 (252)
Q Consensus 142 ~ag~ 145 (252)
+.+.
T Consensus 247 aT~s 250 (417)
T TIGR01035 247 STGA 250 (417)
T ss_pred CCCC
Confidence 8764
No 441
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=96.83 E-value=0.013 Score=48.48 Aligned_cols=98 Identities=19% Similarity=0.205 Sum_probs=60.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC--hHHHHHHHc-CCCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIG-DDSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~--~~~~~~~~~-~~~d~vi~ 141 (252)
.+.+|+|+|+++ +|..+++.+...|.+|+++++++++.+.... ... -.+ .|..+. .+.+. ... +.+|++|+
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~-~~~--~~~~~~~~~~~~~-~~~~~~~d~vi~ 207 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKE-LGA-DHV--IDYKEEDLEEELR-LTGGGGADVVID 207 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-hCC-cee--ccCCcCCHHHHHH-HhcCCCCCEEEE
Confidence 578999999988 9999999888899999999888765443211 111 111 232220 12222 222 14999999
Q ss_pred cCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 142 ~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
+++.. .....+++.++.. ++++.++..
T Consensus 208 ~~~~~-------------~~~~~~~~~l~~~--G~~v~~~~~ 234 (271)
T cd05188 208 AVGGP-------------ETLAQALRLLRPG--GRIVVVGGT 234 (271)
T ss_pred CCCCH-------------HHHHHHHHhcccC--CEEEEEccC
Confidence 98732 1234455555544 478888765
No 442
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=96.82 E-value=0.016 Score=49.70 Aligned_cols=98 Identities=19% Similarity=0.134 Sum_probs=60.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC-hHHHHHHHcCCCcEEEEcCC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~-~~~~~~~~~~~~d~vi~~ag 144 (252)
+.+|+|.|++|.+|..+++.+...|.+|+++++++++.+.... . ++..+ .|..+. .+.+.+.-.+.+|+|+++.|
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~--g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~~g 222 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-L--GAKEV-IPREELQEESIKPLEKQRWAGAVDPVG 222 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-c--CCCEE-EcchhHHHHHHHhhccCCcCEEEECCc
Confidence 5799999999999999999888899999999888776544321 1 22111 122220 22233332224899998876
Q ss_pred CCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 145 ~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
.. .....++.++.. ++++.++..
T Consensus 223 ~~--------------~~~~~~~~l~~~--G~~i~~g~~ 245 (326)
T cd08289 223 GK--------------TLAYLLSTLQYG--GSVAVSGLT 245 (326)
T ss_pred HH--------------HHHHHHHHhhcC--CEEEEEeec
Confidence 21 123344444444 478887653
No 443
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=96.82 E-value=0.0023 Score=56.47 Aligned_cols=107 Identities=10% Similarity=0.087 Sum_probs=69.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCC-e----EEE----eecCchhhhhcc---ccC----CCCeEEEEeeCCCChHHHH
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGF-A----VKA----GVRDLDKAKTTL---SKD----NPSLQIVKADVTEGSAKLS 129 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~-~----V~~----~~r~~~~~~~~~---~~~----~~~~~~i~~Dl~d~~~~~~ 129 (252)
--+|.|+|++|.+|.+++-.|+..|. . |.+ ++++.+..+... .+. ..++.+.. + -.
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~----~----~y 115 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI----D----PY 115 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec----C----CH
Confidence 47999999999999999999998763 2 333 355555543211 100 01121111 1 13
Q ss_pred HHHcCCCcEEEEcCCCCC--CCCCCCcceehHHHHHHHHHHHHhcC-C-CEEEEEc
Q 025456 130 EAIGDDSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRG-V-NRFILIS 181 (252)
Q Consensus 130 ~~~~~~~d~vi~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~-~-~~~v~~S 181 (252)
+.+.+ .|+||.+||... ..+..+.+..|..-...+.+.++++. . .++|.+|
T Consensus 116 ~~~kd-aDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs 170 (387)
T TIGR01757 116 EVFED-ADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG 170 (387)
T ss_pred HHhCC-CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 45777 999999999754 33555667888888899999888743 3 3555555
No 444
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=96.80 E-value=0.0079 Score=52.63 Aligned_cols=109 Identities=25% Similarity=0.197 Sum_probs=66.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCC----CCeE-EEE---ee--CCCChHHHHHHHcCCC
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN----PSLQ-IVK---AD--VTEGSAKLSEAIGDDS 136 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~-~i~---~D--l~d~~~~~~~~~~~~~ 136 (252)
|+|.|.| +|++|.-.+-.|++.||+|++++.++++.+.+..+.. ++++ +++ .+ +.- ..+.++++.+ .
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~f-Ttd~~~a~~~-a 77 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRF-TTDYEEAVKD-A 77 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEE-EcCHHHHHhc-C
Confidence 5788898 6999999999999999999999999988765433211 1110 000 00 111 2335567777 8
Q ss_pred cEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCC-EEEEEcc
Q 025456 137 EAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILISS 182 (252)
Q Consensus 137 d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~SS 182 (252)
|++|-+.|+....+. ..++...+.+++...+.-.+ ++|.+=|
T Consensus 78 dv~fIavgTP~~~dg----~aDl~~V~ava~~i~~~~~~~~vvV~KS 120 (414)
T COG1004 78 DVVFIAVGTPPDEDG----SADLSYVEAVAKDIGEILDGKAVVVIKS 120 (414)
T ss_pred CEEEEEcCCCCCCCC----CccHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence 999999987654322 22344444444444433222 5555433
No 445
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=96.80 E-value=0.012 Score=52.78 Aligned_cols=40 Identities=28% Similarity=0.233 Sum_probs=34.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL 107 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~ 107 (252)
++|.|.|. |.+|..++..|++.|++|++.++++++.+.+.
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~ 40 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKLN 40 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHhh
Confidence 36889985 99999999999999999999999988766543
No 446
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.80 E-value=0.0016 Score=58.40 Aligned_cols=108 Identities=15% Similarity=0.129 Sum_probs=69.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHC---CC----eEEEeecC--chhhhhc---ccc----CCCCeEEEEeeCCCChHHHH
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAK---GF----AVKAGVRD--LDKAKTT---LSK----DNPSLQIVKADVTEGSAKLS 129 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~---G~----~V~~~~r~--~~~~~~~---~~~----~~~~~~~i~~Dl~d~~~~~~ 129 (252)
-.+|+||||+|.||.+|+-.++.- |. .+++++.. .+.++.. +.+ ...++.+. . + ..
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~---~----~~ 194 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T---D----LD 194 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E---C----CH
Confidence 368999999999999999998872 42 25555552 3322210 110 01123222 1 1 23
Q ss_pred HHHcCCCcEEEEcCCCCC--CCCCCCcceehHHHHHHHHHHHHhcCC--CEEEEEcc
Q 025456 130 EAIGDDSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGV--NRFILISS 182 (252)
Q Consensus 130 ~~~~~~~d~vi~~ag~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~--~~~v~~SS 182 (252)
+.+.+ +|+||..+|... ..+..+.++.|..-...+.+++.+... .+++.+.|
T Consensus 195 ea~~d-aDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 195 VAFKD-AHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred HHhCC-CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 56788 999999999754 334556678888888888888877654 46666654
No 447
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.79 E-value=0.0062 Score=51.52 Aligned_cols=58 Identities=21% Similarity=0.283 Sum_probs=46.4
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
++.+++++|+|.++.+|+.++..|+++|..|+++.++. ..+.+.+.. .|+||.+
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-------------------------~~l~~~~~~-ADIVIsA 208 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-------------------------KDMASYLKD-ADVIVSA 208 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------------------hhHHHHHhh-CCEEEEC
Confidence 57899999999999999999999999999999876532 124455666 8888888
Q ss_pred CCCC
Q 025456 143 TGFQ 146 (252)
Q Consensus 143 ag~~ 146 (252)
.|..
T Consensus 209 vg~p 212 (286)
T PRK14175 209 VGKP 212 (286)
T ss_pred CCCC
Confidence 7753
No 448
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=96.78 E-value=0.024 Score=50.10 Aligned_cols=75 Identities=23% Similarity=0.267 Sum_probs=50.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
.+.+|+|.|+ |.+|..+++.+...|.+|++++++.++..+..... +++.+ .|..+ .+.+.+...+ +|+||.++|
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l--Ga~~~-i~~~~-~~~v~~~~~~-~D~vid~~G 251 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL--GADSF-LVTTD-SQKMKEAVGT-MDFIIDTVS 251 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC--CCcEE-EcCcC-HHHHHHhhCC-CcEEEECCC
Confidence 4789999986 99999999988888999988887655432222111 22221 23334 3455555566 999999987
Q ss_pred C
Q 025456 145 F 145 (252)
Q Consensus 145 ~ 145 (252)
.
T Consensus 252 ~ 252 (375)
T PLN02178 252 A 252 (375)
T ss_pred c
Confidence 3
No 449
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=96.78 E-value=0.006 Score=51.70 Aligned_cols=77 Identities=14% Similarity=0.188 Sum_probs=51.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCC--ChHHHHHHHcC-CCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d--~~~~~~~~~~~-~~d~vi~ 141 (252)
.+.+++|+|++|.+|..+++.+...|++|+++.++.+..+.. .... ++. ..|..+ ..+.+.+...+ .+|.+|+
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g--~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALG--ADV-AINYRTEDFAEEVKEATGGRGVDVILD 214 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcC--CCE-EEeCCchhHHHHHHHHhCCCCeEEEEE
Confidence 478999999999999999999999999999988876654432 1111 111 123222 02334444432 4999999
Q ss_pred cCCC
Q 025456 142 ATGF 145 (252)
Q Consensus 142 ~ag~ 145 (252)
++|.
T Consensus 215 ~~g~ 218 (323)
T cd05276 215 MVGG 218 (323)
T ss_pred CCch
Confidence 9873
No 450
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.77 E-value=0.0054 Score=54.38 Aligned_cols=74 Identities=30% Similarity=0.462 Sum_probs=57.7
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~ 141 (252)
++++++++|.|+ |=+|.-++++|.++| .+|+++.|..++..++....+ ++... .+.+.+.+.. .|+||.
T Consensus 175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-------~~~~~-l~el~~~l~~-~DvVis 244 (414)
T COG0373 175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-------AEAVA-LEELLEALAE-ADVVIS 244 (414)
T ss_pred ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-------Ceeec-HHHHHHhhhh-CCEEEE
Confidence 468899999997 899999999999999 689999999888776543222 33333 4567788888 999999
Q ss_pred cCCCC
Q 025456 142 ATGFQ 146 (252)
Q Consensus 142 ~ag~~ 146 (252)
+.|-.
T Consensus 245 sTsa~ 249 (414)
T COG0373 245 STSAP 249 (414)
T ss_pred ecCCC
Confidence 87643
No 451
>PRK07877 hypothetical protein; Provisional
Probab=96.76 E-value=0.014 Score=55.59 Aligned_cols=102 Identities=20% Similarity=0.260 Sum_probs=67.7
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCC--eEEEeecCchh---hhh------------------ccccCCC--CeEE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDK---AKT------------------TLSKDNP--SLQI 116 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~---~~~------------------~~~~~~~--~~~~ 116 (252)
..++..+|+|.|+ | +|++++..|++.|. ++++++.+.=. +.. .+....+ +++.
T Consensus 103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~ 180 (722)
T PRK07877 103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEV 180 (722)
T ss_pred HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEE
Confidence 4567899999999 7 99999999999984 78887765211 100 0111122 3444
Q ss_pred EEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEcc
Q 025456 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (252)
Q Consensus 117 i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS 182 (252)
+...++ .+.+.+.+.+ +|+||.|.- |+..-..+-++|.+.++ .+|+-++
T Consensus 181 ~~~~i~--~~n~~~~l~~-~DlVvD~~D-------------~~~~R~~ln~~a~~~~i-P~i~~~~ 229 (722)
T PRK07877 181 FTDGLT--EDNVDAFLDG-LDVVVEECD-------------SLDVKVLLREAARARRI-PVLMATS 229 (722)
T ss_pred EeccCC--HHHHHHHhcC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEcC
Confidence 555554 4668888888 999998863 33334456678888887 5666664
No 452
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.75 E-value=0.0093 Score=46.02 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=32.2
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeec
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR 98 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r 98 (252)
.++++++|+|.|| |-+|...++.|++.|++|++++.
T Consensus 9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence 4567999999998 99999999999999999998853
No 453
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=96.74 E-value=0.025 Score=49.32 Aligned_cols=34 Identities=29% Similarity=0.405 Sum_probs=28.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCC-CeEEEeecCc
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDL 100 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~ 100 (252)
++|.|+|++|++|+++++.|.+++ .+|..+.++.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~ 35 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP 35 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence 479999999999999999998876 5887775443
No 454
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=96.73 E-value=0.021 Score=49.71 Aligned_cols=96 Identities=14% Similarity=0.165 Sum_probs=59.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHc--CCCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--DDSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~~~d~vi~ 141 (252)
.+.+|+|+|+ |.+|...++.+...|. +|+++++++++.+...+ . +++.+ .|..+ . ++.+... +.+|+||.
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-l--Ga~~v-i~~~~-~-~~~~~~~~~g~~D~vid 241 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-M--GADKL-VNPQN-D-DLDHYKAEKGYFDVSFE 241 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-c--CCcEE-ecCCc-c-cHHHHhccCCCCCEEEE
Confidence 5789999986 9999999988888898 68888888776653322 1 22221 23332 1 1222221 13899999
Q ss_pred cCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEcc
Q 025456 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (252)
Q Consensus 142 ~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS 182 (252)
++|.. ......++.++.. ++++.++.
T Consensus 242 ~~G~~-------------~~~~~~~~~l~~~--G~iv~~G~ 267 (343)
T PRK09880 242 VSGHP-------------SSINTCLEVTRAK--GVMVQVGM 267 (343)
T ss_pred CCCCH-------------HHHHHHHHHhhcC--CEEEEEcc
Confidence 98831 1123445555544 47888764
No 455
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=96.73 E-value=0.021 Score=50.00 Aligned_cols=99 Identities=14% Similarity=0.093 Sum_probs=60.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCe-EEEeecCchhhhhccccCCCCeEEEEeeCCCC--hHHHHHHHcC-CCcEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVV 140 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~--~~~~~~~~~~-~~d~vi 140 (252)
.+.+|+|.|+ |.+|...++.+...|.+ |+++++++++.+.... . +++. ..|..++ .+.+.+...+ .+|+||
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~-~--Ga~~-~i~~~~~~~~~~i~~~~~~~g~d~vi 250 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWARE-F--GATH-TVNSSGTDPVEAIRALTGGFGADVVI 250 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-c--CCce-EEcCCCcCHHHHHHHHhCCCCCCEEE
Confidence 4789999985 99999999888888985 8888887766543321 1 1211 1233221 2344444442 399999
Q ss_pred EcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 141 CATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 141 ~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
.+.|.. ......++.++.. +++|.++..
T Consensus 251 d~~g~~-------------~~~~~~~~~~~~~--G~iv~~G~~ 278 (358)
T TIGR03451 251 DAVGRP-------------ETYKQAFYARDLA--GTVVLVGVP 278 (358)
T ss_pred ECCCCH-------------HHHHHHHHHhccC--CEEEEECCC
Confidence 998731 1122334444444 478887753
No 456
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.71 E-value=0.021 Score=49.01 Aligned_cols=100 Identities=18% Similarity=0.142 Sum_probs=60.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC--hHHHHHHHcCCCcEEEEc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~--~~~~~~~~~~~~d~vi~~ 142 (252)
.+.+++|.|++|.+|..+++.+...|.+|+++.+++++.+.... . ++..+ .|..+. .+.+.+...+.+|.||++
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~--g~~~v-~~~~~~~~~~~~~~~~~~~vd~v~~~ 214 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-L--GCDRP-INYKTEDLGEVLKKEYPKGVDVVYES 214 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-c--CCceE-EeCCCccHHHHHHHhcCCCCeEEEEC
Confidence 47899999999999999999888889999998887665443211 1 12111 222220 122332222238999998
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccce
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~ 184 (252)
.|.. .....++.++.. +++|.+++..
T Consensus 215 ~g~~--------------~~~~~~~~l~~~--g~~v~~g~~~ 240 (329)
T cd08250 215 VGGE--------------MFDTCVDNLALK--GRLIVIGFIS 240 (329)
T ss_pred CcHH--------------HHHHHHHHhccC--CeEEEEeccc
Confidence 7621 123344444443 4788887653
No 457
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=96.71 E-value=0.0077 Score=51.69 Aligned_cols=100 Identities=16% Similarity=0.095 Sum_probs=60.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC--hHHHHHHHcCCCcEEEEc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~--~~~~~~~~~~~~d~vi~~ 142 (252)
.+.+|+|.|++|.+|..+++.+.+.|.+|+++++++++.+........ -.++ |..+. .+.+.+...+.+|++|++
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~-~~~~--~~~~~~~~~~v~~~~~~~~d~vi~~ 221 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF-DAAI--NYKTPDLAEALKEAAPDGIDVYFDN 221 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC-ceEE--ecCChhHHHHHHHhccCCceEEEEc
Confidence 468999999999999999999999999999988877655432210111 1122 22220 223333332249999998
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
+|.. .....++.++.. ++++.+++.
T Consensus 222 ~g~~--------------~~~~~~~~l~~~--G~~v~~g~~ 246 (329)
T cd05288 222 VGGE--------------ILDAALTLLNKG--GRIALCGAI 246 (329)
T ss_pred chHH--------------HHHHHHHhcCCC--ceEEEEeec
Confidence 7731 122334444433 478877654
No 458
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=96.70 E-value=0.0036 Score=57.07 Aligned_cols=72 Identities=15% Similarity=0.176 Sum_probs=49.7
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
.+++++++|+|+ |++|++++..|++.|++|++..|+.++.+....... ... .++.+ +. .+.+ +|+||+|
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~--~~~--~~~~~----~~-~l~~-~DiVIna 397 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ--GKA--FPLES----LP-ELHR-IDIIINC 397 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--cce--echhH----hc-ccCC-CCEEEEc
Confidence 356789999996 899999999999999999999998776554332111 111 12212 11 1455 9999999
Q ss_pred CCC
Q 025456 143 TGF 145 (252)
Q Consensus 143 ag~ 145 (252)
...
T Consensus 398 tP~ 400 (477)
T PRK09310 398 LPP 400 (477)
T ss_pred CCC
Confidence 754
No 459
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.70 E-value=0.004 Score=50.06 Aligned_cols=43 Identities=23% Similarity=0.342 Sum_probs=37.2
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT 105 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~ 105 (252)
.++++|+++|+|. |.+|+++++.|.+.|++|++.+++++....
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~ 66 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVAR 66 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 3567899999998 799999999999999999998888766544
No 460
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.66 E-value=0.023 Score=51.33 Aligned_cols=76 Identities=21% Similarity=0.279 Sum_probs=51.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh-hhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-KTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
+.+++++|+|+ |+.|.++++.|+++|++|.+.+...... ...+.....++.+..++..+ ..+.+ .|.||..
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~~------~~~~~-~d~vv~s 74 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLKD------ALDNG-FDILALS 74 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCCH------HHHhC-CCEEEEC
Confidence 35789999997 6999999999999999999988654321 11121111356655543221 13356 8999999
Q ss_pred CCCCC
Q 025456 143 TGFQP 147 (252)
Q Consensus 143 ag~~~ 147 (252)
.|+.+
T Consensus 75 pgi~~ 79 (445)
T PRK04308 75 PGISE 79 (445)
T ss_pred CCCCC
Confidence 88864
No 461
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.64 E-value=0.021 Score=52.10 Aligned_cols=74 Identities=22% Similarity=0.324 Sum_probs=51.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcC
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~a 143 (252)
..+++|+|.|. |+.|.++++.|++.|++|.+.+++.....+.+. ..++.++.++-. . +.+.+ +|.||...
T Consensus 13 ~~~~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~--~~gi~~~~~~~~--~----~~~~~-~d~vV~Sp 82 (473)
T PRK00141 13 ELSGRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETARHKLIE--VTGVADISTAEA--S----DQLDS-FSLVVTSP 82 (473)
T ss_pred ccCCeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHHHHHHHH--hcCcEEEeCCCc--h----hHhcC-CCEEEeCC
Confidence 35789999995 999999999999999999998876554332221 125555543211 1 23456 89999998
Q ss_pred CCCC
Q 025456 144 GFQP 147 (252)
Q Consensus 144 g~~~ 147 (252)
|+..
T Consensus 83 gi~~ 86 (473)
T PRK00141 83 GWRP 86 (473)
T ss_pred CCCC
Confidence 8764
No 462
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.63 E-value=0.016 Score=44.69 Aligned_cols=71 Identities=28% Similarity=0.368 Sum_probs=46.3
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~ 141 (252)
..+.+|+++|+|= |.+|+.+++.|...|.+|++...+|-+.-+... +++++. . +.+++.. .|++|.
T Consensus 19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~---dGf~v~-----~----~~~a~~~-adi~vt 84 (162)
T PF00670_consen 19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAM---DGFEVM-----T----LEEALRD-ADIFVT 84 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH---TT-EEE----------HHHHTTT--SEEEE
T ss_pred eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhh---cCcEec-----C----HHHHHhh-CCEEEE
Confidence 3457999999995 999999999999999999999998865533221 344432 1 4456677 899998
Q ss_pred cCCCC
Q 025456 142 ATGFQ 146 (252)
Q Consensus 142 ~ag~~ 146 (252)
+.|..
T Consensus 85 aTG~~ 89 (162)
T PF00670_consen 85 ATGNK 89 (162)
T ss_dssp -SSSS
T ss_pred CCCCc
Confidence 88753
No 463
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=96.62 E-value=0.036 Score=47.00 Aligned_cols=104 Identities=17% Similarity=0.302 Sum_probs=64.5
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhc----------------------cccCCCCeE--EE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSKDNPSLQ--IV 117 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~--~i 117 (252)
.++..+|+|.|+ |++|.++++.|+..|. +|++++.+.-...++ +....+.+. .+
T Consensus 16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~ 94 (286)
T cd01491 16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS 94 (286)
T ss_pred HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 345789999997 8999999999999996 577766543111111 111122222 22
Q ss_pred EeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeecc
Q 025456 118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGA 188 (252)
Q Consensus 118 ~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~ 188 (252)
..++ ..+.+.+ +|+||.+.. |......+-++|++.++ .||...+.+.+|.
T Consensus 95 ~~~~------~~~~l~~-fdvVV~~~~-------------~~~~~~~in~~c~~~~i-pfI~a~~~G~~G~ 144 (286)
T cd01491 95 TGPL------TTDELLK-FQVVVLTDA-------------SLEDQLKINEFCHSPGI-KFISADTRGLFGS 144 (286)
T ss_pred eccC------CHHHHhc-CCEEEEecC-------------CHHHHHHHHHHHHHcCC-EEEEEeccccEEE
Confidence 2221 1234556 787776642 33445567788999887 7888887766553
No 464
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=96.61 E-value=0.027 Score=49.57 Aligned_cols=99 Identities=15% Similarity=0.091 Sum_probs=59.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhccccCCCCeEEEEeeCCC--ChHHHHHHHcCCCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d--~~~~~~~~~~~~~d~vi~ 141 (252)
.+.+|+|.|+ |.+|..+++.+...|. +|+++++++++.+.... . +++. ..|..+ ..+.+.+...+.+|+||.
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~-~--Ga~~-~i~~~~~~~~~~i~~~~~~g~d~vid 265 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-L--GATA-TVNAGDPNAVEQVRELTGGGVDYAFE 265 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-c--CCce-EeCCCchhHHHHHHHHhCCCCCEEEE
Confidence 4789999985 9999999888888898 68888888766543221 1 2221 123222 123344443324899999
Q ss_pred cCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 142 ~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
+.|.. ......++.++.. ++++.++..
T Consensus 266 ~~G~~-------------~~~~~~~~~l~~~--G~iv~~G~~ 292 (371)
T cd08281 266 MAGSV-------------PALETAYEITRRG--GTTVTAGLP 292 (371)
T ss_pred CCCCh-------------HHHHHHHHHHhcC--CEEEEEccC
Confidence 98732 1223344555544 478877643
No 465
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.59 E-value=0.032 Score=48.47 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=27.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCC---CeEEEeecC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKG---FAVKAGVRD 99 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r~ 99 (252)
+.++|.|.||||++|..+++.|.++. .++..+...
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 46799999999999999999999843 366655443
No 466
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.59 E-value=0.0035 Score=50.21 Aligned_cols=35 Identities=26% Similarity=0.279 Sum_probs=28.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK 102 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 102 (252)
|++.|. |+|-||..++++|++.|++|++..|+.++
T Consensus 2 ~~~~i~-GtGniG~alA~~~a~ag~eV~igs~r~~~ 36 (211)
T COG2085 2 MIIAII-GTGNIGSALALRLAKAGHEVIIGSSRGPK 36 (211)
T ss_pred cEEEEe-ccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence 455554 57999999999999999999998666544
No 467
>PRK06849 hypothetical protein; Provisional
Probab=96.57 E-value=0.009 Score=53.03 Aligned_cols=38 Identities=13% Similarity=0.173 Sum_probs=34.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchh
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK 102 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 102 (252)
+.|+|||||+...+|..+++.|.+.|++|++++.++..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 46999999999999999999999999999999887643
No 468
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.56 E-value=0.0078 Score=47.43 Aligned_cols=71 Identities=17% Similarity=0.208 Sum_probs=48.6
Q ss_pred ccCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEE
Q 025456 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~ 141 (252)
..+.+++|.|.|. |.||+++++.|..-|.+|++.+|.......... ..+ . ..++++.+.. .|+|+.
T Consensus 32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~---~~~-----~----~~~l~ell~~-aDiv~~ 97 (178)
T PF02826_consen 32 RELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE---FGV-----E----YVSLDELLAQ-ADIVSL 97 (178)
T ss_dssp S-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH---TTE-----E----ESSHHHHHHH--SEEEE
T ss_pred cccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccc---ccc-----e----eeehhhhcch-hhhhhh
Confidence 3457999999995 999999999999999999999998875431110 111 1 2235667777 898888
Q ss_pred cCCCC
Q 025456 142 ATGFQ 146 (252)
Q Consensus 142 ~ag~~ 146 (252)
+....
T Consensus 98 ~~plt 102 (178)
T PF02826_consen 98 HLPLT 102 (178)
T ss_dssp -SSSS
T ss_pred hhccc
Confidence 76543
No 469
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=96.55 E-value=0.034 Score=48.09 Aligned_cols=98 Identities=15% Similarity=0.196 Sum_probs=60.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCe-EEEeecCchhhhhccccCCCCeEEEEeeCCCC-hHHHHHHHcC-CCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAKLSEAIGD-DSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~-~~~~~~~~~~-~~d~vi~ 141 (252)
.+.+|+|+|+ |.+|..+++.+...|.+ |+++++++++.+.... . +++. ..|..+. .+.+.+...+ .+|+||.
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~-~--ga~~-~i~~~~~~~~~~~~~~~~~~~d~vid 237 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKA-L--GADF-VINSGQDDVQEIRELTSGAGADVAIE 237 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h--CCCE-EEcCCcchHHHHHHHhCCCCCCEEEE
Confidence 4789999986 99999999988888988 9988887766543221 1 1221 1233221 2334444443 4999999
Q ss_pred cCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEcc
Q 025456 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (252)
Q Consensus 142 ~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS 182 (252)
+.|... .....++.++.. ++++.++.
T Consensus 238 ~~g~~~-------------~~~~~~~~l~~~--G~~v~~g~ 263 (339)
T cd08239 238 CSGNTA-------------ARRLALEAVRPW--GRLVLVGE 263 (339)
T ss_pred CCCCHH-------------HHHHHHHHhhcC--CEEEEEcC
Confidence 987321 112344545544 37877765
No 470
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=96.55 E-value=0.0085 Score=51.39 Aligned_cols=74 Identities=24% Similarity=0.291 Sum_probs=53.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC-----hHHHHHHHcCCCcEEE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-----SAKLSEAIGDDSEAVV 140 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~-----~~~~~~~~~~~~d~vi 140 (252)
+++|.|.|+ |--|.+|+..|++.|++|++..|+++...+... ...+.++.. ++.-+ ..++.+++++ .|.|+
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~-~~~N~~yLp-~i~lp~~l~at~Dl~~a~~~-ad~iv 76 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINE-TRENPKYLP-GILLPPNLKATTDLAEALDG-ADIIV 76 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHh-cCcCccccC-CccCCcccccccCHHHHHhc-CCEEE
Confidence 368999997 899999999999999999999999887766443 223344443 22221 3457777777 88777
Q ss_pred EcC
Q 025456 141 CAT 143 (252)
Q Consensus 141 ~~a 143 (252)
...
T Consensus 77 ~av 79 (329)
T COG0240 77 IAV 79 (329)
T ss_pred EEC
Confidence 654
No 471
>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.
Probab=96.54 E-value=0.038 Score=49.54 Aligned_cols=103 Identities=15% Similarity=0.206 Sum_probs=60.3
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCC------eEEEeecCchhhhhc----------------------cccCCCC--eEEE
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGF------AVKAGVRDLDKAKTT----------------------LSKDNPS--LQIV 117 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~------~V~~~~r~~~~~~~~----------------------~~~~~~~--~~~i 117 (252)
+|+|.|+ |++|.++++.|+..|. ++++++.+.=....+ +....+. ++.+
T Consensus 1 kVlvVGa-GGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~ 79 (435)
T cd01490 1 KVFLVGA-GAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITAL 79 (435)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEE
Confidence 5889996 9999999999999987 788777653211110 0001122 3333
Q ss_pred EeeCCCChHH-H-HHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceee
Q 025456 118 KADVTEGSAK-L-SEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVN 186 (252)
Q Consensus 118 ~~Dl~d~~~~-~-~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~ 186 (252)
...+..+.+. + .+.+.+ +|+||++.- |+..-..+-+.|...++ .+|..++.+.+
T Consensus 80 ~~~v~~~~~~~~~~~f~~~-~DvVi~alD-------------n~~aR~~vn~~C~~~~i-Pli~~gt~G~~ 135 (435)
T cd01490 80 QNRVGPETEHIFNDEFWEK-LDGVANALD-------------NVDARMYVDRRCVYYRK-PLLESGTLGTK 135 (435)
T ss_pred ecccChhhhhhhhHHHhcC-CCEEEECCC-------------CHHHHHHHHHHHHHhCC-CEEEEecccce
Confidence 3333220011 1 234455 777776642 45556678888888886 57777665543
No 472
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.54 E-value=0.014 Score=49.72 Aligned_cols=78 Identities=19% Similarity=0.249 Sum_probs=51.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEcC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT 143 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~a 143 (252)
++.+++|+|++|.+|..+++.+...|++|++++++.++.+.... ... -.++..+..+..+.+.+...+ .+|.+++++
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 221 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGA-AHVIVTDEEDLVAEVLRITGGKGVDVVFDPV 221 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCC-CEEEecCCccHHHHHHHHhCCCCceEEEECC
Confidence 46799999999999999999999999999999888765543321 111 122222211212334444432 499999987
Q ss_pred C
Q 025456 144 G 144 (252)
Q Consensus 144 g 144 (252)
|
T Consensus 222 ~ 222 (328)
T cd08268 222 G 222 (328)
T ss_pred c
Confidence 7
No 473
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.54 E-value=0.0036 Score=43.76 Aligned_cols=66 Identities=29% Similarity=0.346 Sum_probs=44.6
Q ss_pred EEEEEcCCChHHHHHHHHHHHCC---CeEEEe-ecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcC
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKG---FAVKAG-VRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G---~~V~~~-~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~a 143 (252)
++.|.| +|-+|.+|++.|++.| ++|.+. .|++++..+..... ++.+...| ..++++. .|+||.+.
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~--~~~~~~~~-------~~~~~~~-advvilav 69 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY--GVQATADD-------NEEAAQE-ADVVILAV 69 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC--TTEEESEE-------HHHHHHH-TSEEEE-S
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh--ccccccCC-------hHHhhcc-CCEEEEEE
Confidence 467775 6999999999999999 899965 89988776654322 22332222 2334555 89999886
Q ss_pred C
Q 025456 144 G 144 (252)
Q Consensus 144 g 144 (252)
-
T Consensus 70 ~ 70 (96)
T PF03807_consen 70 K 70 (96)
T ss_dssp -
T ss_pred C
Confidence 4
No 474
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=96.53 E-value=0.023 Score=51.75 Aligned_cols=115 Identities=14% Similarity=0.060 Sum_probs=65.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCC--CeEEEeecCchhhhhccccCC----CCeEEE----Eee-CCCChHHHHHHHcC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDN----PSLQIV----KAD-VTEGSAKLSEAIGD 134 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~~~----~~~~~i----~~D-l~d~~~~~~~~~~~ 134 (252)
+|+|.|.| .|++|..++-.|++.| ++|++++.++++.+.+..+.. +++.-+ ... ++- ..++.+++.+
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~-t~~~~~~i~~ 78 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFF-STDVEKHVAE 78 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEE-EcCHHHHHhc
Confidence 46799997 4999999999999884 789999999888766433210 111000 000 100 1223445666
Q ss_pred CCcEEEEcCCCCCCCCC-CCcceehHHHHHHHHHHHHhc-CCCEEEEEccc
Q 025456 135 DSEAVVCATGFQPGWDL-FAPWKVDNFGTVNLVEACRKR-GVNRFILISSI 183 (252)
Q Consensus 135 ~~d~vi~~ag~~~~~~~-~~~~~~n~~g~~~ll~~~~~~-~~~~~v~~SS~ 183 (252)
.|++|-|.++....+- ...-..++.....+++.+.+. .-+.+|.+.|.
T Consensus 79 -advi~I~V~TP~~~~g~~~~~~~Dls~v~~a~~~i~~~l~~~~lVv~~ST 128 (473)
T PLN02353 79 -ADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (473)
T ss_pred -CCEEEEEeCCCCCCCCCcCCCCCcHHHHHHHHHHHHhhCCCCcEEEEeCC
Confidence 9999999986543221 111233454455555544332 22356555554
No 475
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.53 E-value=0.013 Score=52.51 Aligned_cols=39 Identities=31% Similarity=0.277 Sum_probs=35.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA 103 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~ 103 (252)
+.+++|+|+|. |.||+.+++.|...|.+|++.++++.+.
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra 248 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA 248 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence 46899999996 9999999999999999999998887654
No 476
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=96.51 E-value=0.036 Score=46.76 Aligned_cols=99 Identities=19% Similarity=0.189 Sum_probs=58.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCe-EEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcC-CCcEEEEc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCA 142 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~d~vi~~ 142 (252)
.+.+|+|.|+ |.+|...++.+...|.+ |+++++++++.+.... . +++.+ .|..+..+.+.+...+ .+|+||.+
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~-~--Ga~~~-i~~~~~~~~~~~~~~~~g~d~vid~ 194 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALS-F--GATAL-AEPEVLAERQGGLQNGRGVDVALEF 194 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-c--CCcEe-cCchhhHHHHHHHhCCCCCCEEEEC
Confidence 5789999986 89999998888788986 8877777665443221 1 12111 1222212333333332 38999999
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccc
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~ 183 (252)
.|... .....++.++.. ++++.++..
T Consensus 195 ~G~~~-------------~~~~~~~~l~~~--G~iv~~G~~ 220 (280)
T TIGR03366 195 SGATA-------------AVRACLESLDVG--GTAVLAGSV 220 (280)
T ss_pred CCChH-------------HHHHHHHHhcCC--CEEEEeccC
Confidence 87321 123344444443 478887753
No 477
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=96.50 E-value=0.027 Score=48.37 Aligned_cols=33 Identities=24% Similarity=0.442 Sum_probs=27.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeec
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVR 98 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r 98 (252)
+.+|.|.||||++|..+++.|.++.+ ++..+..
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s 35 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPE 35 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEec
Confidence 57899999999999999999999874 5555443
No 478
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.47 E-value=0.0098 Score=52.57 Aligned_cols=36 Identities=19% Similarity=0.390 Sum_probs=32.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL 100 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 100 (252)
..++|.|.||.|.+|..+++.|.+.|++|++.+|+.
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 458999999999999999999999999999998753
No 479
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.47 E-value=0.0093 Score=51.06 Aligned_cols=104 Identities=19% Similarity=0.161 Sum_probs=64.1
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhc---cccC----CCCeEEEEeeCCCChHHHHHHHcCCCcEEE
Q 025456 69 IFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT---LSKD----NPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 69 vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~---~~~~----~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
|.|.|+ |.+|..++..|+.+|. +|++++++++..... +... .....+ . .+. + . +.+.+ .|+||
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I-~--~t~--d-~-~~l~d-ADiVI 71 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKV-T--GTN--D-Y-EDIAG-SDVVV 71 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEE-E--EcC--C-H-HHhCC-CCEEE
Confidence 468998 9999999999998876 999999987643211 1000 011111 1 111 1 2 34678 99999
Q ss_pred EcCCCCCCCC--CCCcceehHHHHHHHHHHHHhcCCC-EEEEEc
Q 025456 141 CATGFQPGWD--LFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (252)
Q Consensus 141 ~~ag~~~~~~--~~~~~~~n~~g~~~ll~~~~~~~~~-~~v~~S 181 (252)
.++|.....+ ..+.+.-|+.-.+.+++.+.+...+ .+|.+|
T Consensus 72 it~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 72 ITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred EecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9998754322 2233455777777777777766543 444544
No 480
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=96.44 E-value=0.014 Score=51.61 Aligned_cols=67 Identities=21% Similarity=0.285 Sum_probs=51.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEE
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi 140 (252)
+++|+|.|| |.+|+.++..+.+.|++|++++.+++....... -..+.+|..| .+.+.+.... +|+|.
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a-----d~~~~~~~~D-~~~l~~~a~~-~dvit 68 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA-----DEVIVADYDD-VAALRELAEQ-CDVIT 68 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC-----ceEEecCCCC-HHHHHHHHhc-CCEEE
Confidence 578999998 799999999999999999999877654322111 1345578877 8888888887 88775
No 481
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=96.44 E-value=0.14 Score=43.25 Aligned_cols=108 Identities=17% Similarity=0.108 Sum_probs=68.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC---hHHHHHHHcCCCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG---SAKLSEAIGDDSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~---~~~~~~~~~~~~d~vi~ 141 (252)
++++|+|-||+|-+|+-+-+...-.|+.|++.+-+.++..-+....+-.. ..|.-++ ...+.+.+...+|+.|.
T Consensus 153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~---afNYK~e~~~~~aL~r~~P~GIDiYfe 229 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDD---AFNYKEESDLSAALKRCFPEGIDIYFE 229 (343)
T ss_pred CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCcc---ceeccCccCHHHHHHHhCCCcceEEEe
Confidence 57999999999999996665555579999999888776554332111110 1222221 23444444334999999
Q ss_pred cCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccCCC
Q 025456 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMG 191 (252)
Q Consensus 142 ~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~~~ 191 (252)
|.|-. ....++..++.++ |++.-+-++.|.....
T Consensus 230 NVGG~--------------~lDavl~nM~~~g--ri~~CG~ISqYN~~~~ 263 (343)
T KOG1196|consen 230 NVGGK--------------MLDAVLLNMNLHG--RIAVCGMISQYNLENP 263 (343)
T ss_pred ccCcH--------------HHHHHHHhhhhcc--ceEeeeeehhccccCC
Confidence 98742 1234555666665 8888887777765433
No 482
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=96.44 E-value=0.015 Score=49.71 Aligned_cols=76 Identities=20% Similarity=0.170 Sum_probs=51.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCC--ChHHHHHHHcC-CCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d--~~~~~~~~~~~-~~d~vi~ 141 (252)
.+.+++|.||+|.+|..+++.+...|.+|+++.++.++.+.... . +++.+ .+..+ ..+.+.+...+ .+|+||+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~--g~~~~-~~~~~~~~~~~i~~~~~~~~~d~v~d 214 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L--GIGPV-VSTEQPGWQDKVREAAGGAPISVALD 214 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c--CCCEE-EcCCCchHHHHHHHHhCCCCCcEEEE
Confidence 47899999999999999999888899999998887765544322 1 22211 12222 02334445443 4999999
Q ss_pred cCC
Q 025456 142 ATG 144 (252)
Q Consensus 142 ~ag 144 (252)
+.|
T Consensus 215 ~~g 217 (324)
T cd08292 215 SVG 217 (324)
T ss_pred CCC
Confidence 887
No 483
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.44 E-value=0.017 Score=44.65 Aligned_cols=58 Identities=29% Similarity=0.365 Sum_probs=40.4
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
++.+|+++|.|.+..+|+.++..|.++|..|++..... .++++.+.. .|+||.+
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T-------------------------~~l~~~~~~-ADIVVsa 86 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT-------------------------KNLQEITRR-ADIVVSA 86 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS-------------------------SSHHHHHTT-SSEEEE-
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC-------------------------Ccccceeee-ccEEeee
Confidence 46799999999999999999999999999998754332 123445555 7788877
Q ss_pred CCCC
Q 025456 143 TGFQ 146 (252)
Q Consensus 143 ag~~ 146 (252)
+|..
T Consensus 87 ~G~~ 90 (160)
T PF02882_consen 87 VGKP 90 (160)
T ss_dssp SSST
T ss_pred eccc
Confidence 7754
No 484
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=96.44 E-value=0.015 Score=49.46 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=50.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCC--ChHHHHHHHcC-CCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d--~~~~~~~~~~~-~~d~vi~ 141 (252)
.+.+++|+|++|.+|..+++.+...|++|+++.++.+..+.. ... ++..+ .+..+ ..+.+.+...+ .+|.+|+
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~--g~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i~ 214 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL--GADIA-INYREEDFVEVVKAETGGKGVDVILD 214 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc--CCcEE-EecCchhHHHHHHHHcCCCCeEEEEE
Confidence 478999999999999999998889999999988877654422 211 12111 12222 01333333332 4999999
Q ss_pred cCC
Q 025456 142 ATG 144 (252)
Q Consensus 142 ~ag 144 (252)
++|
T Consensus 215 ~~~ 217 (325)
T TIGR02824 215 IVG 217 (325)
T ss_pred CCc
Confidence 887
No 485
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.43 E-value=0.037 Score=48.27 Aligned_cols=34 Identities=32% Similarity=0.439 Sum_probs=26.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHC-CCe---EEEeecC
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAK-GFA---VKAGVRD 99 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~-G~~---V~~~~r~ 99 (252)
..+|.|.||||++|+.+++.|.++ ..+ +..+...
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~ 42 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSK 42 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence 579999999999999999999964 455 5555433
No 486
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=96.42 E-value=0.017 Score=45.87 Aligned_cols=80 Identities=16% Similarity=0.136 Sum_probs=52.1
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
+++||+|+|.|-+.-+|+-++..|+++|+.|++...+..... . .............|.+..+.+.+.. .|+||.+
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~---~-~~~~~~hs~t~~~~~~~~l~~~~~~-ADIVIsA 133 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVF---T-RGESIRHEKHHVTDEEAMTLDCLSQ-SDVVITG 133 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCccccc---c-cccccccccccccchhhHHHHHhhh-CCEEEEc
Confidence 567999999999999999999999999999998754332110 0 0000000011111212346677777 9999999
Q ss_pred CCCCC
Q 025456 143 TGFQP 147 (252)
Q Consensus 143 ag~~~ 147 (252)
+|...
T Consensus 134 vG~~~ 138 (197)
T cd01079 134 VPSPN 138 (197)
T ss_pred cCCCC
Confidence 88643
No 487
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=96.40 E-value=0.018 Score=51.41 Aligned_cols=68 Identities=25% Similarity=0.267 Sum_probs=48.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcC
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~a 143 (252)
..+++|+|.|+ |.||..+++.+...|.+|+++++++.+...... .+++.+ + . .+.+.+ .|+||.+.
T Consensus 200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~---~G~~~~-----~-~---~e~v~~-aDVVI~at 265 (413)
T cd00401 200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAM---EGYEVM-----T-M---EEAVKE-GDIFVTTT 265 (413)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh---cCCEEc-----c-H---HHHHcC-CCEEEECC
Confidence 46899999997 899999999999999999998888766543221 223222 2 1 234556 88888877
Q ss_pred CC
Q 025456 144 GF 145 (252)
Q Consensus 144 g~ 145 (252)
|.
T Consensus 266 G~ 267 (413)
T cd00401 266 GN 267 (413)
T ss_pred CC
Confidence 63
No 488
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=96.40 E-value=0.018 Score=49.20 Aligned_cols=76 Identities=21% Similarity=0.267 Sum_probs=51.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCC--hHHHHHHHcC-CCcEEEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVC 141 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~--~~~~~~~~~~-~~d~vi~ 141 (252)
.+.+++|+|++|.+|..+++.+...|.+|++++++.++.+.. ... ++.. ..|..+. .+.+.+...+ .+|.|++
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl~ 217 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL--GADV-AVDYTRPDWPDQVREALGGGGVTVVLD 217 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc--CCCE-EEecCCccHHHHHHHHcCCCCceEEEE
Confidence 468999999999999999998889999999998887665432 211 1211 1232221 2334444443 4999999
Q ss_pred cCC
Q 025456 142 ATG 144 (252)
Q Consensus 142 ~ag 144 (252)
+.|
T Consensus 218 ~~g 220 (324)
T cd08244 218 GVG 220 (324)
T ss_pred CCC
Confidence 976
No 489
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=96.37 E-value=0.01 Score=50.11 Aligned_cols=106 Identities=15% Similarity=0.109 Sum_probs=66.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcccc--CCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEc
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ 142 (252)
.+.+|+|.||+|-+|+-+.+...-+|++|+.+.-.+++.+-+... .+..+.+..-|+ .+.+.++..+.+|+.|-|
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~---~~~L~~a~P~GIDvyfeN 226 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDF---AQALKEACPKGIDVYFEN 226 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccH---HHHHHHHCCCCeEEEEEc
Confidence 589999999999999976665555799999999888776543321 122222222222 345555554349999999
Q ss_pred CCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEEccceeeccC
Q 025456 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAA 189 (252)
Q Consensus 143 ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~SS~~v~~~~ 189 (252)
.|-.. ...++..++.. .||+..+-++-|...
T Consensus 227 VGg~v--------------~DAv~~~ln~~--aRi~~CG~IS~YN~~ 257 (340)
T COG2130 227 VGGEV--------------LDAVLPLLNLF--ARIPVCGAISQYNAP 257 (340)
T ss_pred CCchH--------------HHHHHHhhccc--cceeeeeehhhcCCC
Confidence 87421 01122222222 488888888777665
No 490
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.35 E-value=0.054 Score=49.49 Aligned_cols=73 Identities=23% Similarity=0.289 Sum_probs=50.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhh-h---hccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEE
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-K---TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~---~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~v 139 (252)
.++++|+|.|+ |++|..+++.|.++|++|++++++.... . +.+. ..+++++.++-. . ...+ +|.|
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~--~~gv~~~~~~~~---~----~~~~-~D~V 82 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILE--ALGATVRLGPGP---T----LPED-TDLV 82 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHH--HcCCEEEECCCc---c----ccCC-CCEE
Confidence 35789999997 8999999999999999999988654321 1 1121 235666554321 1 2334 8999
Q ss_pred EEcCCCCC
Q 025456 140 VCATGFQP 147 (252)
Q Consensus 140 i~~ag~~~ 147 (252)
|...|+.+
T Consensus 83 v~s~Gi~~ 90 (480)
T PRK01438 83 VTSPGWRP 90 (480)
T ss_pred EECCCcCC
Confidence 99988765
No 491
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.34 E-value=0.0095 Score=51.34 Aligned_cols=39 Identities=36% Similarity=0.384 Sum_probs=33.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh
Q 025456 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT 105 (252)
Q Consensus 66 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~ 105 (252)
|++|.|.|+ |.+|..++..|++.|++|.+.+|+++..+.
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~ 39 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAE 39 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 368999996 999999999999999999999998766543
No 492
>PRK06153 hypothetical protein; Provisional
Probab=96.34 E-value=0.053 Score=47.72 Aligned_cols=99 Identities=12% Similarity=0.144 Sum_probs=60.8
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhh------------hh-------------ccccCCCCeEE
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKA------------KT-------------TLSKDNPSLQI 116 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~------------~~-------------~~~~~~~~~~~ 116 (252)
.+++.+|+|.|+ |++|++++..|++.|. ++++++.+.=.. ++ .+.....++..
T Consensus 173 kL~~~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~I~~ 251 (393)
T PRK06153 173 KLEGQRIAIIGL-GGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRGIVP 251 (393)
T ss_pred HHhhCcEEEEcC-CccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCeEEE
Confidence 456789999997 9999999999999985 677766541000 00 00001223444
Q ss_pred EEeeCCCChHHHHHHHcCCCcEEEEcCCCCCCCCCCCcceehHHHHHHHHHHHHhcCCCEEEEE
Q 025456 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILI 180 (252)
Q Consensus 117 i~~Dl~d~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~v~~ 180 (252)
+...+ + ++.+. .+.+ +|+||.|.. |..+-..+.++|.+.+++ +|.+
T Consensus 252 ~~~~I-~-~~n~~-~L~~-~DiV~dcvD-------------n~~aR~~ln~~a~~~gIP-~Id~ 297 (393)
T PRK06153 252 HPEYI-D-EDNVD-ELDG-FTFVFVCVD-------------KGSSRKLIVDYLEALGIP-FIDV 297 (393)
T ss_pred EeecC-C-HHHHH-HhcC-CCEEEEcCC-------------CHHHHHHHHHHHHHcCCC-EEEe
Confidence 44445 3 34443 5667 899998875 333445566777777753 4443
No 493
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.34 E-value=0.022 Score=48.46 Aligned_cols=76 Identities=21% Similarity=0.175 Sum_probs=50.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhccccCCCCeEEEEeeCCCChHHHHHHHcCCCcEEEEcCC
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~d~vi~~ag 144 (252)
.+.+++|.|++|.+|..+++.+...|.+|+++.+++++.+.... . +++.+..+-.+..+.+.+. ++.+|.++++.|
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~--g~~~~~~~~~~~~~~i~~~-~~~~d~vl~~~~ 217 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKE-L--GADEVVIDDGAIAEQLRAA-PGGFDKVLELVG 217 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c--CCcEEEecCccHHHHHHHh-CCCceEEEECCC
Confidence 47899999999999999999888999999998888765543321 1 2222211211112334444 335999999876
No 494
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=96.33 E-value=0.04 Score=48.94 Aligned_cols=38 Identities=21% Similarity=0.049 Sum_probs=31.8
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhhcc
Q 025456 68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL 107 (252)
Q Consensus 68 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~ 107 (252)
+|.|.| .|++|..++..|+ .|++|++.++++++.+.+.
T Consensus 2 kI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~ 39 (388)
T PRK15057 2 KITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAMLN 39 (388)
T ss_pred EEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHH
Confidence 688887 5999999997666 5999999999998876544
No 495
>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=96.33 E-value=0.031 Score=47.35 Aligned_cols=35 Identities=26% Similarity=0.426 Sum_probs=28.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecC
Q 025456 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRD 99 (252)
Q Consensus 64 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 99 (252)
.++.-|+|.|+ |++|++++..|++-|. ++.+++.+
T Consensus 72 l~~syVVVVG~-GgVGSwv~nmL~RSG~qKi~iVDfd 107 (430)
T KOG2018|consen 72 LTNSYVVVVGA-GGVGSWVANMLLRSGVQKIRIVDFD 107 (430)
T ss_pred hcCcEEEEEec-CchhHHHHHHHHHhcCceEEEechh
Confidence 45678899997 9999999999999997 46666554
No 496
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.32 E-value=0.045 Score=49.51 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=29.4
Q ss_pred CcEEE----EEcCCChHHHHHHHHHHHCCCeEEEeecCch
Q 025456 66 QKKIF----VAGATGSSGKRIVEQLLAKGFAVKAGVRDLD 101 (252)
Q Consensus 66 ~~~vl----VtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 101 (252)
+..++ |+||+|++|.++++.|...|++|+...+.+.
T Consensus 34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~ 73 (450)
T PRK08261 34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGL 73 (450)
T ss_pred CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccc
Confidence 34555 7888999999999999999999998765543
No 497
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.30 E-value=0.021 Score=43.14 Aligned_cols=36 Identities=25% Similarity=0.303 Sum_probs=32.8
Q ss_pred cCCCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeec
Q 025456 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR 98 (252)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r 98 (252)
++++++|.|.|.+.-+|..++..|.++|..|++..+
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~ 60 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDW 60 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCC
Confidence 457999999999999999999999999999988754
No 498
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=96.28 E-value=0.043 Score=46.98 Aligned_cols=31 Identities=26% Similarity=0.458 Sum_probs=25.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHCCC-eEEEee
Q 025456 67 KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGV 97 (252)
Q Consensus 67 ~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~ 97 (252)
.+|.|.||+|+.|..+++.|+++.+ ++..+.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~ 33 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIA 33 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEe
Confidence 4799999999999999999999863 555543
No 499
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.26 E-value=0.057 Score=47.02 Aligned_cols=40 Identities=35% Similarity=0.335 Sum_probs=34.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCCeEEEeecCchhhhh
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT 105 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~ 105 (252)
.+.+|+|.|+ |.+|...++.+...|.+|+++++++++.+.
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~ 205 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEM 205 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4789999999 999999999888889999998888776653
No 500
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=96.25 E-value=0.067 Score=47.06 Aligned_cols=76 Identities=11% Similarity=-0.003 Sum_probs=48.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHHCCC-eEEEeecCchhhhhccccCCCCeEEEEeeCCCC----hHHHHHHHcCCCcEE
Q 025456 65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG----SAKLSEAIGDDSEAV 139 (252)
Q Consensus 65 ~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~i~~Dl~d~----~~~~~~~~~~~~d~v 139 (252)
.+.+|+|+|+ |.+|...++.+...|. +|+++++++++.+.... . +++. ..|..+. .+.+.+...+.+|++
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~-~--Ga~~-~i~~~~~~~~~~~~v~~~~~~g~d~v 259 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKK-L--GATD-CVNPNDYDKPIQEVIVEITDGGVDYS 259 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-h--CCCe-EEcccccchhHHHHHHHHhCCCCCEE
Confidence 4789999985 9999999888888898 79988888766543321 1 1211 1232220 133444433239999
Q ss_pred EEcCCC
Q 025456 140 VCATGF 145 (252)
Q Consensus 140 i~~ag~ 145 (252)
|.++|.
T Consensus 260 id~~G~ 265 (368)
T TIGR02818 260 FECIGN 265 (368)
T ss_pred EECCCC
Confidence 999873
Done!