Query 025464
Match_columns 252
No_of_seqs 176 out of 1441
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 10:52:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025464.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025464hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 2.5E-54 8.6E-59 363.6 22.0 220 17-240 1-223 (223)
2 3iyz_A Aquaporin-4; water tran 100.0 2.4E-54 8.1E-59 379.5 21.9 222 16-241 48-272 (340)
3 1j4n_A Aquaporin 1; membrane p 100.0 3.3E-53 1.1E-57 366.3 21.8 230 12-242 3-237 (271)
4 2w2e_A AQY1, aquaporin, aquapo 100.0 9.2E-53 3.2E-57 364.1 24.5 225 16-242 41-268 (279)
5 2zz9_A Aquaporin-4; water tran 100.0 6.2E-53 2.1E-57 367.6 22.3 225 12-240 5-232 (301)
6 3cn5_A Aquaporin; membrane pro 100.0 2.3E-53 8E-58 371.1 18.0 228 11-241 52-290 (304)
7 2b6o_A Aquaporin-0, lens fiber 100.0 7.7E-52 2.6E-56 356.3 26.2 222 12-241 2-226 (263)
8 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 1.3E-52 4.5E-57 361.1 21.0 221 13-241 5-229 (266)
9 3llq_A Aquaporin Z 2; aquapori 100.0 2.5E-51 8.5E-56 350.3 20.8 218 14-238 24-253 (256)
10 2o9g_A Aquaporin Z; integral m 100.0 5.4E-51 1.9E-55 345.8 22.0 216 18-240 3-232 (234)
11 2f2b_A Aquaporin AQPM; protein 100.0 2.4E-50 8E-55 344.6 22.4 220 18-239 3-245 (246)
12 1ldf_A Glycerol uptake facilit 100.0 7.5E-51 2.6E-55 353.6 18.4 223 15-243 3-260 (281)
13 3c02_A Aquaglyceroporin; membr 100.0 5.1E-51 1.8E-55 350.6 12.3 222 16-243 6-247 (258)
14 2f2b_A Aquaporin AQPM; protein 99.6 5.7E-15 1.9E-19 125.7 12.4 104 13-126 137-245 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.6 2.7E-15 9.3E-20 128.7 8.4 102 140-241 8-111 (263)
16 3d9s_A Aquaporin-5, AQP-5; aqu 99.5 2.4E-14 8.1E-19 122.9 6.3 101 140-240 10-112 (266)
17 3llq_A Aquaporin Z 2; aquapori 99.5 3.9E-14 1.3E-18 120.6 6.4 101 140-240 28-133 (256)
18 2zz9_A Aquaporin-4; water tran 99.5 1E-13 3.5E-18 120.6 8.8 101 140-240 11-117 (301)
19 2o9g_A Aquaporin Z; integral m 99.4 7.8E-14 2.7E-18 117.7 6.3 100 141-240 4-108 (234)
20 3iyz_A Aquaporin-4; water tran 99.4 1E-13 3.6E-18 121.7 6.5 101 140-240 50-156 (340)
21 2w2e_A AQY1, aquaporin, aquapo 99.4 3.7E-13 1.3E-17 116.2 9.5 102 140-241 43-155 (279)
22 3gd8_A Aquaporin-4; proton exc 99.4 1.2E-13 4.1E-18 115.7 5.9 101 140-240 2-108 (223)
23 3c02_A Aquaglyceroporin; membr 99.4 9.7E-14 3.3E-18 118.8 5.4 101 140-240 8-112 (258)
24 1j4n_A Aquaporin 1; membrane p 99.4 1.6E-13 5.4E-18 118.2 6.6 101 140-240 9-120 (271)
25 3cn5_A Aquaporin; membrane pro 99.4 2.1E-13 7.2E-18 118.8 6.8 101 140-240 59-166 (304)
26 1ldf_A Glycerol uptake facilit 99.4 2E-13 6.7E-18 118.3 6.4 101 140-240 6-110 (281)
27 3kcu_A Probable formate transp 91.3 6.2 0.00021 33.5 15.0 102 58-162 68-182 (285)
28 3tds_E Formate/nitrite transpo 71.3 44 0.0015 27.9 13.5 104 56-161 62-176 (268)
29 3kly_A Putative formate transp 61.9 71 0.0024 26.8 14.1 101 58-162 67-181 (280)
30 3s2u_A UDP-N-acetylglucosamine 40.6 5.7 0.0002 34.4 -0.1 20 78-97 10-29 (365)
31 4fc4_A Nitrite transporter NIR 37.5 1.7E+02 0.0059 24.1 12.8 103 58-162 58-171 (261)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-54 Score=363.62 Aligned_cols=220 Identities=35% Similarity=0.623 Sum_probs=193.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHHHHHhc
Q 025464 17 PDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGG 96 (252)
Q Consensus 17 ~~~~~~~~~EfigTfllv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~~~~~g 96 (252)
++.+|++++||+||++|+++++++.+.. .++.+.++.+++.++++||+++++.+++++++||||+|||||+++++.|
T Consensus 1 ~~~~r~~~aEfiGT~~lv~~g~g~~~~~---~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g 77 (223)
T 3gd8_A 1 QAFWKAVTAEFLAMLIFVLLSLGSTINW---GGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR 77 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCCT---TTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcC
Confidence 4689999999999999999999998643 1222233567899999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhhCCC---cccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 025464 97 HITLLRSILYWIAQLLGSVVACLLLKFSTGGL---ETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGT 173 (252)
Q Consensus 97 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~~~~s~~~~~~~E~~~t~~l~~~v~~~~~~~~~~~~~~ 173 (252)
+++|++++.|+++|++||++|+.+++.++++. ....+.+.++.+..++++.|+++|++|+++++. ..|+++.....
T Consensus 78 ~~~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~-~~~~~~~~~~~ 156 (223)
T 3gd8_A 78 KISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFA-SCDSKRTDVTG 156 (223)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHH-HTCTTCSCCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHH-HhccccCCccC
Confidence 99999999999999999999999999988642 123345667789999999999999999999998 46666544445
Q ss_pred chhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhcCCCcceecchhhHHHHHHHHHHHHHHhcC
Q 025464 174 IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 174 ~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
..|+.||+.+...+..++++||++||||||||||++.++|+++|+||++|++|+++++++|++++.|
T Consensus 157 ~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 157 SIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 6899999999888888888899999999999999999999999999999999999999999998764
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-54 Score=379.52 Aligned_cols=222 Identities=35% Similarity=0.633 Sum_probs=194.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHHHHHh
Q 025464 16 HPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVG 95 (252)
Q Consensus 16 ~~~~~~~~~~EfigTfllv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~~~~~ 95 (252)
+++++|++++||+|||+|+|+++++++.. .+.....+.+++.++++||+++++.+++++++||||+|||||+++++.
T Consensus 48 ~~~l~r~~lAEflGT~lLV~~G~Gs~a~~---~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~ 124 (340)
T 3iyz_A 48 TQAFWKAVTAEFLAMLIFVLLSVGSTINW---GGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCT 124 (340)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHc
Confidence 45789999999999999999999998743 122223346788999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCc---ccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 025464 96 GHITLLRSILYWIAQLLGSVVACLLLKFSTGGLE---TSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLG 172 (252)
Q Consensus 96 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~E~~~t~~l~~~v~~~~~~~~~~~~~ 172 (252)
|+++|++++.|+++|++||++|+++++.++++.. ...+.+.++.+..++++.|+++||+|+++++.+ .|+++....
T Consensus 125 G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~-~d~~~~~~~ 203 (340)
T 3iyz_A 125 RKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDKRTDVT 203 (340)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHh-hcCccCCcc
Confidence 9999999999999999999999999999886432 223445667889999999999999999999984 665554334
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhcCCCcceecchhhHHHHHHHHHHHHHHhcCC
Q 025464 173 TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDD 241 (252)
Q Consensus 173 ~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~la~~l~~~~~~~~ 241 (252)
...|+.||+++.+.+..++++||++|||||||||+++.++|.++|+||++|++|+++|+++|++++.|+
T Consensus 204 ~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~ 272 (340)
T 3iyz_A 204 GSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 272 (340)
T ss_pred cchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCC
Confidence 568999999998888888899999999999999999999999999999999999999999999998764
No 3
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=3.3e-53 Score=366.25 Aligned_cols=230 Identities=36% Similarity=0.627 Sum_probs=197.5
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcccc--cCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHH
Q 025464 12 GEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKL--TDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVT 89 (252)
Q Consensus 12 ~~~~~~~~~~~~~~EfigTfllv~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavT 89 (252)
+|.++++++|++++||+||++|+|+++++.+..... .+.......+++.++++||+++++.+++++++||||+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 466678899999999999999999999988653321 111122234688999999999999999999999999999999
Q ss_pred HHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCc---ccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhcCC
Q 025464 90 FGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLE---TSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDP 166 (252)
Q Consensus 90 l~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~E~~~t~~l~~~v~~~~~~~ 166 (252)
+++++.|+++|++++.|+++|++||++|+++++.++++.. ...+.+.++.+..++++.|+++|++|+++++. ..|+
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~-~~d~ 161 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLA-TTDR 161 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHH-HTCS
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHh-hccc
Confidence 9999999999999999999999999999999999985432 22344556778889999999999999999998 4676
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhcCCCcceecchhhHHHHHHHHHHHHHHhcCCC
Q 025464 167 KKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDN 242 (252)
Q Consensus 167 ~~~~~~~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~la~~l~~~~~~~~~ 242 (252)
++...+.+.|+.||+.+.+.+..++++||+++||||||||++++++|+++|+||++|++|+++|+++|++++.+++
T Consensus 162 ~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 162 RRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp SCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5544446799999999998888888899999999999999999999999999999999999999999999987643
No 4
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=9.2e-53 Score=364.14 Aligned_cols=225 Identities=31% Similarity=0.435 Sum_probs=190.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhhccc-c-cCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHHHH
Q 025464 16 HPDALKAALAEFFSMIIFVFAGQGSGMAFSK-L-TDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAF 93 (252)
Q Consensus 16 ~~~~~~~~~~EfigTfllv~~~~~~~~~~~~-~-~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~~~ 93 (252)
-++.+|++++||+|||+|+|+++++....+. . .++.+.+..+++.++++||+++++.+++++++||||+|||||++++
T Consensus 41 ~~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~ 120 (279)
T 2w2e_A 41 VRNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALV 120 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHH
Confidence 3578899999999999999999987432111 1 1111223457889999999999999999999999999999999999
Q ss_pred HhcccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 025464 94 VGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGT 173 (252)
Q Consensus 94 ~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~~l~~~v~~~~~~~~~~~~~~ 173 (252)
+.|+++|++++.|+++|++||++|+++++.++++.......+.++.+..++++.|+++|++|+++++.+..++++ ...
T Consensus 121 ~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~--~~~ 198 (279)
T 2w2e_A 121 LARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR--ATW 198 (279)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST--TGG
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC--CcC
Confidence 999999999999999999999999999999997644322334456788999999999999999999985444332 235
Q ss_pred chhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhcCC-CcceecchhhHHHHHHHHHHHHHHhcCCC
Q 025464 174 IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTW-TNHWVYWLGPFIGAAIAAIVYDHIFIDDN 242 (252)
Q Consensus 174 ~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~~~-~~~~vy~~~p~~Ga~la~~l~~~~~~~~~ 242 (252)
+.|+.||+.+.+.+++.+++||++|||||||||+++++.| +++|+||++|++|+++|+++|+++...++
T Consensus 199 ~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~ 268 (279)
T 2w2e_A 199 FAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNY 268 (279)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 7899999999999999999999999999999999998765 68999999999999999999999987744
No 5
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=6.2e-53 Score=367.61 Aligned_cols=225 Identities=34% Similarity=0.613 Sum_probs=194.4
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHH
Q 025464 12 GEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFG 91 (252)
Q Consensus 12 ~~~~~~~~~~~~~~EfigTfllv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~ 91 (252)
++..+++++|++++||+|||+|+|+++++.+.... .....+.+++.++++||+++++.+++++++||||+|||||++
T Consensus 5 ~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~---~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla 81 (301)
T 2zz9_A 5 KGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGG---SENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVA 81 (301)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTC---C-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---CCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHH
Confidence 46678899999999999999999999998865321 112234578899999999999999999999999999999999
Q ss_pred HHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCcc---cccccCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 025464 92 AFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLET---SAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK 168 (252)
Q Consensus 92 ~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~---~~~~~~~~~s~~~~~~~E~~~t~~l~~~v~~~~~~~~~ 168 (252)
+++.|+++|++++.|+++|++||++|+++++.++++... ..+.+.++.+..++++.|+++||+|+++++.+ .|+++
T Consensus 82 ~~~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~-~d~~~ 160 (301)
T 2zz9_A 82 MVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDKR 160 (301)
T ss_dssp HHHTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-SCSSS
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHh-cCCCC
Confidence 999999999999999999999999999999999875322 23344567788999999999999999999984 66555
Q ss_pred CCCCcchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhcCCCcceecchhhHHHHHHHHHHHHHHhcC
Q 025464 169 GNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 169 ~~~~~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
.....+.|+.||+.+.+.+..++++||++|||||||||+++.+.|.++|+||++|++|+++|+++|++++.+
T Consensus 161 ~~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~ 232 (301)
T 2zz9_A 161 TDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP 232 (301)
T ss_dssp SCCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred CCccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCC
Confidence 444457899999999888888888999999999999999999999999999999999999999999999865
No 6
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=2.3e-53 Score=371.08 Aligned_cols=228 Identities=39% Similarity=0.616 Sum_probs=195.3
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHH
Q 025464 11 PGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTF 90 (252)
Q Consensus 11 ~~~~~~~~~~~~~~~EfigTfllv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl 90 (252)
.+|..+++++|++++||+|||+|+|+++++.+...... ++....+++.++++||+++++.+|+++++||||+|||||+
T Consensus 52 ~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~--~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTl 129 (304)
T 3cn5_A 52 LGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKET--VVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTF 129 (304)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC--STTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEecccc--CCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHH
Confidence 35677889999999999999999999999987543222 1223468899999999999999999999999999999999
Q ss_pred HHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhhCCC----cccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhcCC
Q 025464 91 GAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGL----ETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDP 166 (252)
Q Consensus 91 ~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~~~~~~~~~s~~~~~~~E~~~t~~l~~~v~~~~~~~ 166 (252)
++++.|+++|++++.|+++|++||++|+++++.++++. ......+.++.+..++++.|+++||+|+++++. +.|+
T Consensus 130 a~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~-~~d~ 208 (304)
T 3cn5_A 130 GLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFS-ATDP 208 (304)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TEEE
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhh-eecC
Confidence 99999999999999999999999999999999987532 111222455678899999999999999999996 6775
Q ss_pred CCCCCCc----chhHHHHHHHHHHHHHcCCCCCccccccchHHHHHh---hcCCCcceecchhhHHHHHHHHHHHHHHhc
Q 025464 167 KKGNLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV---SWTWTNHWVYWLGPFIGAAIAAIVYDHIFI 239 (252)
Q Consensus 167 ~~~~~~~----~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~---~~~~~~~~vy~~~p~~Ga~la~~l~~~~~~ 239 (252)
++...+. +.|+.||+++++..++.+++||+++|||||||||++ ++.|+++|+||++|++|+++|+++|++++.
T Consensus 209 ~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~ 288 (304)
T 3cn5_A 209 KRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLR 288 (304)
T ss_dssp EEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSC
T ss_pred ccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhC
Confidence 5433322 789999999999999999999999999999999999 568999999999999999999999999987
Q ss_pred CC
Q 025464 240 DD 241 (252)
Q Consensus 240 ~~ 241 (252)
++
T Consensus 289 ~~ 290 (304)
T 3cn5_A 289 AA 290 (304)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 7
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=7.7e-52 Score=356.27 Aligned_cols=222 Identities=38% Similarity=0.648 Sum_probs=196.1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHH
Q 025464 12 GEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFG 91 (252)
Q Consensus 12 ~~~~~~~~~~~~~~EfigTfllv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~ 91 (252)
+|.++++.+|++++||+|||+|+++++++.+.. +..+.+++.+++++|+++++.+++++++||+|+|||||++
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~-------~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla 74 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFA 74 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-------CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHH
Confidence 466788999999999999999999999888521 1123578899999999999999999999999999999999
Q ss_pred HHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhhCCC---cccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 025464 92 AFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGL---ETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK 168 (252)
Q Consensus 92 ~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~~~~s~~~~~~~E~~~t~~l~~~v~~~~~~~~~ 168 (252)
+++.|+++|++++.|+++|++||++|+.+++.++++. ....+.+.++.+..++++.|+++|++|+++++.+ .|+++
T Consensus 75 ~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~ 153 (263)
T 2b6o_A 75 FLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERR 153 (263)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTS
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccC
Confidence 9999999999999999999999999999999998753 2234456677889999999999999999999984 77665
Q ss_pred CCCCcchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhcCCCcceecchhhHHHHHHHHHHHHHHhcCC
Q 025464 169 GNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDD 241 (252)
Q Consensus 169 ~~~~~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~la~~l~~~~~~~~ 241 (252)
.....+.|+.||+.+.+.+++.+++||++|||||||||+++.++|+++|+||++|++|+++|+++|++++.++
T Consensus 154 ~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 154 NGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred CCCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4444679999999999999999999999999999999999999999999999999999999999999998763
No 8
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-52 Score=361.13 Aligned_cols=221 Identities=36% Similarity=0.605 Sum_probs=194.9
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHHH
Q 025464 13 EASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGA 92 (252)
Q Consensus 13 ~~~~~~~~~~~~~EfigTfllv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~~ 92 (252)
|.++++++|++++||+||++|+|+++++.+.. . ..+.+++.++++||+++++.+++++++||||+|||||+++
T Consensus 5 e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~---~----~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~ 77 (266)
T 3d9s_A 5 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKW---P----SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLAL 77 (266)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCC---S----SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred hhhChHHHHHHHHHHHHHHHHHHHHHHHHhCC---C----CCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHH
Confidence 45678899999999999999999999988521 1 1134788999999999999999999999999999999999
Q ss_pred HHhcccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCc---ccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 025464 93 FVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLE---TSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKG 169 (252)
Q Consensus 93 ~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~E~~~t~~l~~~v~~~~~~~~~~ 169 (252)
++.|+++|++++.|+++|++||++|+.+++.++++.. ...+.+.++.+..++++.|+++|++|+++++.+ .|+++.
T Consensus 78 ~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~ 156 (266)
T 3d9s_A 78 LVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFAS-TDSRRT 156 (266)
T ss_dssp HHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCTTCC
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccCC
Confidence 9999999999999999999999999999999986421 223344567788999999999999999999985 676654
Q ss_pred CCCcchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhcCCCc-ceecchhhHHHHHHHHHHHHHHhcCC
Q 025464 170 NLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTN-HWVYWLGPFIGAAIAAIVYDHIFIDD 241 (252)
Q Consensus 170 ~~~~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~~~~~-~~vy~~~p~~Ga~la~~l~~~~~~~~ 241 (252)
......|+.||+.+.+.++.++++||++|||||||||+++.++|++ +|+||++|++|+++|+++|++++.++
T Consensus 157 ~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 229 (266)
T 3d9s_A 157 SPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 229 (266)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 4445799999999999999999999999999999999999999998 99999999999999999999998764
No 9
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.5e-51 Score=350.33 Aligned_cols=218 Identities=28% Similarity=0.413 Sum_probs=184.5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHHHH
Q 025464 14 ASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAF 93 (252)
Q Consensus 14 ~~~~~~~~~~~~EfigTfllv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~~~ 93 (252)
..+++++|++++||+||++|++++|++++..... +....+++.++++||+++++.+++++++||||+|||||++++
T Consensus 24 ~~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~----~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~ 99 (256)
T 3llq_A 24 FQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAF----PELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLT 99 (256)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHTTC----TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHH
Confidence 3467889999999999999999999987543221 122457899999999999999999999999999999999999
Q ss_pred HhcccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCc---------ccccccCC-CCchHHHHHHHHHHHHHHHHHHHHHh
Q 025464 94 VGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLE---------TSAFALSS-GVSSWNAVVFEIVMTFGLVYTVYATA 163 (252)
Q Consensus 94 ~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---------~~~~~~~~-~~s~~~~~~~E~~~t~~l~~~v~~~~ 163 (252)
+.|+++|++++.|+++|++||++|+++++.++++.. ...+++.+ ..+..++++.|+++|++|+++++. .
T Consensus 100 ~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~-~ 178 (256)
T 3llq_A 100 VAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILG-S 178 (256)
T ss_dssp HTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHH-h
Confidence 999999999999999999999999999999875321 11122223 568889999999999999999998 5
Q ss_pred cCCCCCCCCcchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhcC--CCcceecchhhHHHHHHHHHHHHHHh
Q 025464 164 VDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWT--WTNHWVYWLGPFIGAAIAAIVYDHIF 238 (252)
Q Consensus 164 ~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~~--~~~~~vy~~~p~~Ga~la~~l~~~~~ 238 (252)
.|+++. ..+.|+.||+.+.++.++.+++||++||||||||||++.++ |+++|+||++|++|+++|+++|+++.
T Consensus 179 ~d~~~~--~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 179 THGRVP--AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HSTTSC--TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCC--ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 776542 34789999999999999999999999999999999999764 56899999999999999999999985
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=5.4e-51 Score=345.81 Aligned_cols=216 Identities=29% Similarity=0.456 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHHHHHhcc
Q 025464 18 DALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGH 97 (252)
Q Consensus 18 ~~~~~~~~EfigTfllv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~~~~~g~ 97 (252)
+++|++++||+||++|+++++++.+.... .+....+++.++++||+++++.+++++++||||+|||||+++++.|+
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~----~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~ 78 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAG----FPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGR 78 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTT----CTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccC----CCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCC
Confidence 36899999999999999999998753211 11123578899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhCCCc-----------ccccccCC-CCchHHHHHHHHHHHHHHHHHHHHHhcC
Q 025464 98 ITLLRSILYWIAQLLGSVVACLLLKFSTGGLE-----------TSAFALSS-GVSSWNAVVFEIVMTFGLVYTVYATAVD 165 (252)
Q Consensus 98 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-----------~~~~~~~~-~~s~~~~~~~E~~~t~~l~~~v~~~~~~ 165 (252)
++|++++.|+++|++||++|+.+++.++++.. ...+.+.+ +.+..++++.|+++|++|+++++. ..|
T Consensus 79 ~~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~-~~d 157 (234)
T 2o9g_A 79 FPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHG-ATD 157 (234)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHH-HTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 99999999999999999999999999986431 01122222 568899999999999999999998 567
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhcC--CCcceecchhhHHHHHHHHHHHHHHhcC
Q 025464 166 PKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWT--WTNHWVYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 166 ~~~~~~~~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~~--~~~~~vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
+++ ...+.|+.||+.+.+..++.+++||++||||||||||++.++ |+++|+||++|++|+++++++|++++.+
T Consensus 158 ~~~--~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 158 KFA--PAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp TTS--CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCC--ccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 543 235799999999999999999999999999999999999875 5599999999999999999999999765
No 11
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=2.4e-50 Score=344.60 Aligned_cols=220 Identities=33% Similarity=0.492 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCC-------CC-----CCchhHHHHHHHHHHHHHHHHHhhcccCCcCc
Q 025464 18 DALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGG-------AS-----TPAGLISASLAHAFALFVAVSVGANISGGHVN 85 (252)
Q Consensus 18 ~~~~~~~~EfigTfllv~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~a~~~g~~~~~~i~~~~~isGah~N 85 (252)
+.+|++++||+||++|+|+++++.+....+.+++ .. +..+++.++++||+++++.+++++++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 5789999999999999999999887643222110 00 23457789999999999999999999999999
Q ss_pred hHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCc---cccccc--CCCCchHHHHHHHHHHHHHHHHHHH
Q 025464 86 PAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLE---TSAFAL--SSGVSSWNAVVFEIVMTFGLVYTVY 160 (252)
Q Consensus 86 PavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~--~~~~s~~~~~~~E~~~t~~l~~~v~ 160 (252)
||||+++++.|+++|++++.|+++|++||++|+.+++.+++++. ...+.+ .++.+..+.++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 99999999999999999999999999999999999999997621 222333 3477889999999999999999999
Q ss_pred HHhcCCCCCCCCcchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHh--h----cCCCcceecchhhHHHHHHHHHHH
Q 025464 161 ATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV--S----WTWTNHWVYWLGPFIGAAIAAIVY 234 (252)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~--~----~~~~~~~vy~~~p~~Ga~la~~l~ 234 (252)
.+..|+++. ....|+.+|+.+.+.+++.+++||+++||||||||++. . +.|++.|+||++|++|+++++++|
T Consensus 163 ~~~~~~~~~--~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y 240 (246)
T 2f2b_A 163 GIAVDERAP--KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTY 240 (246)
T ss_dssp HHTTSTTSC--TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCC--CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHH
Confidence 854454432 35789999999999999999999999999999999993 2 368888999999999999999999
Q ss_pred HHHhc
Q 025464 235 DHIFI 239 (252)
Q Consensus 235 ~~~~~ 239 (252)
+.+++
T Consensus 241 ~~l~~ 245 (246)
T 2f2b_A 241 QYLTS 245 (246)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 99865
No 12
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=7.5e-51 Score=353.61 Aligned_cols=223 Identities=26% Similarity=0.414 Sum_probs=185.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHHHHH
Q 025464 15 SHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFV 94 (252)
Q Consensus 15 ~~~~~~~~~~~EfigTfllv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~~~~ 94 (252)
++++++|++++||+|||+|+|+++++..... ..+. ..+.+.++++||+++++.+++++++||||+|||||+++++
T Consensus 3 ~~~~~~~~~laEflGT~~Lv~~G~g~~~~~~-l~~~----~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 77 (281)
T 1ldf_A 3 QTSTLKGQCIAEFLGTGLLIFFGVGCVAALK-VAGA----SFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWL 77 (281)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSCC----CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCC----CCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHH
Confidence 4567899999999999999999999876432 2221 1244568999999999999999999999999999999999
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCc-------------------cccccc--CCCCchHHHHHHHHHHHH
Q 025464 95 GGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLE-------------------TSAFAL--SSGVSSWNAVVFEIVMTF 153 (252)
Q Consensus 95 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-------------------~~~~~~--~~~~s~~~~~~~E~~~t~ 153 (252)
.|+++|++++.|+++|++||++|+++++.++++.. ...+++ .++.+..++++.|+++|+
T Consensus 78 ~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf 157 (281)
T 1ldf_A 78 FACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITA 157 (281)
T ss_dssp HSCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999998874210 112333 345788999999999999
Q ss_pred HHHHHHHHHhcCCCCCC-CCcchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhc-------CC------Ccceec
Q 025464 154 GLVYTVYATAVDPKKGN-LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-------TW------TNHWVY 219 (252)
Q Consensus 154 ~l~~~v~~~~~~~~~~~-~~~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~-------~~------~~~~vy 219 (252)
+|+++++.+ .|+++.. .+.+.|+.||+.+.+..++.+++||++||||||||||++.. .| .++|+|
T Consensus 158 ~Lv~~il~~-~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy 236 (281)
T 1ldf_A 158 ILMGLILAL-TDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVP 236 (281)
T ss_dssp HHHHHHHHH-HCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHH
T ss_pred HHHHHHHHH-hccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHH
Confidence 999999984 6665543 24679999999999999999999999999999999999862 12 279999
Q ss_pred chhhHHHHHHHHHHHHHHhcCCCC
Q 025464 220 WLGPFIGAAIAAIVYDHIFIDDNA 243 (252)
Q Consensus 220 ~~~p~~Ga~la~~l~~~~~~~~~~ 243 (252)
|++|++|+++|+++|++++.++.+
T Consensus 237 ~vgPi~Ga~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 237 LFGPIVGAIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGC-
T ss_pred hHHHHHHHHHHHHHHHHHhCccCC
Confidence 999999999999999999876444
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=5.1e-51 Score=350.63 Aligned_cols=222 Identities=23% Similarity=0.369 Sum_probs=184.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHHHHHh
Q 025464 16 HPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVG 95 (252)
Q Consensus 16 ~~~~~~~~~~EfigTfllv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~~~~~ 95 (252)
+++++|++++||+||++|+|+++++..... .. + ...+++.++++||+++++.+++++++||||+|||||+++++.
T Consensus 6 ~~~~~~~~~aEflGT~~lv~~G~g~~~~~~-~~-~---~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~ 80 (258)
T 3c02_A 6 YKSYVREFIGEFLGTFVLMFLGEGATANFH-TT-G---LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSI 80 (258)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHH-HS-S---STTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cC-C---CCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHh
Confidence 357899999999999999999999876432 11 1 134688999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhCCC----cccc----cccCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 025464 96 GHITLLRSILYWIAQLLGSVVACLLLKFSTGGL----ETSA----FALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPK 167 (252)
Q Consensus 96 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~~----~~~~~~~s~~~~~~~E~~~t~~l~~~v~~~~~~~~ 167 (252)
|+++|++++.|+++|++||++|+.+++.++++. ..+. .......+..++++.|+++|++|+++++.+ .|+|
T Consensus 81 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~-~d~~ 159 (258)
T 3c02_A 81 NKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVV-VDEN 159 (258)
T ss_dssp TSSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHH-hCcc
Confidence 999999999999999999999999999987521 0010 111123455679999999999999999984 6655
Q ss_pred CC-CCCcch-hHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhc------CC----CcceecchhhHHHHHHHHHHHH
Q 025464 168 KG-NLGTIA-PIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW------TW----TNHWVYWLGPFIGAAIAAIVYD 235 (252)
Q Consensus 168 ~~-~~~~~~-~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~------~~----~~~~vy~~~p~~Ga~la~~l~~ 235 (252)
++ ....+. |+.||+.+.+..++.+++||++||||||||||++.+ .| +++|+||++|++|+++++++|+
T Consensus 160 ~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~ 239 (258)
T 3c02_A 160 ICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYD 239 (258)
T ss_dssp HHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHH
Confidence 43 233567 999999999999999999999999999999999873 34 6799999999999999999999
Q ss_pred HHhcCCCC
Q 025464 236 HIFIDDNA 243 (252)
Q Consensus 236 ~~~~~~~~ 243 (252)
+++.++++
T Consensus 240 ~~~~~~~~ 247 (258)
T 3c02_A 240 KVICPLVD 247 (258)
T ss_dssp HTHHHHHH
T ss_pred HHhcccCC
Confidence 99876443
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.60 E-value=5.7e-15 Score=125.68 Aligned_cols=104 Identities=25% Similarity=0.360 Sum_probs=84.9
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHHH
Q 025464 13 EASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGA 92 (252)
Q Consensus 13 ~~~~~~~~~~~~~EfigTfllv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~~ 92 (252)
+....+..+.++.|+++||+|++..++..... +. +.+ ..++.+|+.+....+..+++||+|+|||+|++.
T Consensus 137 p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~-----~~---~~~--~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp 206 (246)
T 2f2b_A 137 PFPGISYWQAMLAEVVGTFLLMITIMGIAVDE-----RA---PKG--FAGIIIGLTVAGIITTLGNISGSSLNPARTFGP 206 (246)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHTTST-----TS---CTT--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred CccccchHHHHHHHHHHHHHHHheeeEEecCC-----CC---CCc--eeeHHHHHHHHHHHhcccccCCCccCHHHHHHH
Confidence 33466789999999999999999988654311 00 111 246888999999999999999999999999998
Q ss_pred HH-----hcccchhHHHHHHHHHHHHHHHHHHHHHHhhC
Q 025464 93 FV-----GGHITLLRSILYWIAQLLGSVVACLLLKFSTG 126 (252)
Q Consensus 93 ~~-----~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 126 (252)
.+ .++..|.+.++||++|++|+++|+++.+.+.+
T Consensus 207 ~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 207 YLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 88 34667999999999999999999999887754
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.58 E-value=2.7e-15 Score=128.68 Aligned_cols=102 Identities=25% Similarity=0.319 Sum_probs=86.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-cchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhc-CCCcce
Q 025464 140 SSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLG-TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWTNHW 217 (252)
Q Consensus 140 s~~~~~~~E~~~t~~l~~~v~~~~~~~~~~~~~-~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~-~~~~~~ 217 (252)
+..+.++.|+++|++|++..+.+....+....+ ...++.+|+.+++.+++.+++||+|+|||++++.++.+. .|.+.|
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~ 87 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAI 87 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHH
Confidence 567889999999999999998865432221111 135678899999999999999999999999999999876 788999
Q ss_pred ecchhhHHHHHHHHHHHHHHhcCC
Q 025464 218 VYWLGPFIGAAIAAIVYDHIFIDD 241 (252)
Q Consensus 218 vy~~~p~~Ga~la~~l~~~~~~~~ 241 (252)
+||++|++|+++|+.+.+.+++++
T Consensus 88 ~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 88 CYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc
Confidence 999999999999999999998763
No 16
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.49 E-value=2.4e-14 Score=122.89 Aligned_cols=101 Identities=20% Similarity=0.216 Sum_probs=84.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-cchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhc-CCCcce
Q 025464 140 SSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLG-TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWTNHW 217 (252)
Q Consensus 140 s~~~~~~~E~~~t~~l~~~v~~~~~~~~~~~~~-~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~-~~~~~~ 217 (252)
+..+.++.|+++|++|++....++....+...+ ....+.+|+.+++.+++.+++||+|+|||++++.++.+. .|.+.+
T Consensus 10 ~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~ 89 (266)
T 3d9s_A 10 AFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAF 89 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHHH
Confidence 567889999999999999988865432222212 135678899999999999999999999999999999876 689999
Q ss_pred ecchhhHHHHHHHHHHHHHHhcC
Q 025464 218 VYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 218 vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
.|+++|++|+++|+.+.+.++++
T Consensus 90 ~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 90 FYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999998854
No 17
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.47 E-value=3.9e-14 Score=120.61 Aligned_cols=101 Identities=28% Similarity=0.270 Sum_probs=82.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcC-CCCC--CCC-cchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhc-CCC
Q 025464 140 SSWNAVVFEIVMTFGLVYTVYATAVD-PKKG--NLG-TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWT 214 (252)
Q Consensus 140 s~~~~~~~E~~~t~~l~~~v~~~~~~-~~~~--~~~-~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~-~~~ 214 (252)
+..+.+++|+++|++|++..+.++.. ...+ ..+ ....+.+|+.|++.+++.+++||+|+|||++++.++.+. .|.
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 107 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPAS 107 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHH
Confidence 56789999999999999987775321 1111 111 124577899999999999999999999999999999876 799
Q ss_pred cceecchhhHHHHHHHHHHHHHHhcC
Q 025464 215 NHWVYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 215 ~~~vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
+.+.|+++|++|+++|+.+.+.+++.
T Consensus 108 ~~~~YiiAQ~lGA~~ga~lv~~~~~~ 133 (256)
T 3llq_A 108 SLVPYVIAQVAGAIVAAAALYVIATG 133 (256)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999988853
No 18
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.47 E-value=1e-13 Score=120.59 Aligned_cols=101 Identities=17% Similarity=0.227 Sum_probs=84.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CCC--cchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhc-CC
Q 025464 140 SSWNAVVFEIVMTFGLVYTVYATAVDPKKG---NLG--TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW 213 (252)
Q Consensus 140 s~~~~~~~E~~~t~~l~~~v~~~~~~~~~~---~~~--~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~-~~ 213 (252)
+.++.++.|+++|++|++..+.++...... ... ....+..|+.+++.+++.+++||+|+|||++++..+.+. .|
T Consensus 11 ~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 90 (301)
T 2zz9_A 11 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 90 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCH
Confidence 568999999999999999888754321111 111 135677899999999999999999999999999999876 79
Q ss_pred CcceecchhhHHHHHHHHHHHHHHhcC
Q 025464 214 TNHWVYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 214 ~~~~vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
.....|+++|++|+++|+.+.+.++++
T Consensus 91 ~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 117 (301)
T 2zz9_A 91 AKSVFYITAQCLGAIIGAGILYLVTPP 117 (301)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999998876
No 19
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.45 E-value=7.8e-14 Score=117.71 Aligned_cols=100 Identities=25% Similarity=0.248 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCC--C-cchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhc-CCCc
Q 025464 141 SWNAVVFEIVMTFGLVYTVYATAVDPK-KGNL--G-TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWTN 215 (252)
Q Consensus 141 ~~~~~~~E~~~t~~l~~~v~~~~~~~~-~~~~--~-~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~-~~~~ 215 (252)
..+.++.|+++|++|++..+..+..++ .+.. + ....+..|+.+++.+++.+++||+|+|||++++..+.+. .|.+
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 468899999999999998776433222 1111 1 124577899999999999999999999999999999876 7889
Q ss_pred ceecchhhHHHHHHHHHHHHHHhcC
Q 025464 216 HWVYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 216 ~~vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
...|+++|++|+++|+.+.+.++++
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~ 108 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASG 108 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999875
No 20
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.43 E-value=1e-13 Score=121.74 Aligned_cols=101 Identities=17% Similarity=0.238 Sum_probs=83.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCC--CCC-CCC--cchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhc-CC
Q 025464 140 SSWNAVVFEIVMTFGLVYTVYATAVDP--KKG-NLG--TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW 213 (252)
Q Consensus 140 s~~~~~~~E~~~t~~l~~~v~~~~~~~--~~~-~~~--~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~-~~ 213 (252)
+.++.+++|+++|++|++..+.++... +.. ... ....+..|+.|++.+++.+++||+|+|||++++.++.+. .|
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~ 129 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 129 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCH
Confidence 457899999999999999887754321 111 111 235677899999999999999999999999999999876 68
Q ss_pred CcceecchhhHHHHHHHHHHHHHHhcC
Q 025464 214 TNHWVYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 214 ~~~~vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
.....|+++|++|+++|+.+.+.++++
T Consensus 130 ~~~~~YiiAQ~lGA~~GA~lv~~~~~~ 156 (340)
T 3iyz_A 130 AKSVFYITAQCLGAIIGAGILYLVTPP 156 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 899999999999999999999888765
No 21
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.43 E-value=3.7e-13 Score=116.17 Aligned_cols=102 Identities=17% Similarity=0.195 Sum_probs=82.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHh---cCCC----CCCC-C--cchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHh
Q 025464 140 SSWNAVVFEIVMTFGLVYTVYATA---VDPK----KGNL-G--TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 209 (252)
Q Consensus 140 s~~~~~~~E~~~t~~l~~~v~~~~---~~~~----~~~~-~--~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~ 209 (252)
+..+.++.|+++|++|++..+..+ .... .... . ....+..|+.+++.+++.+++||+|+|||++++..+.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 456789999999999998766532 1111 0111 1 1356778999999999999999999999999999998
Q ss_pred hc-CCCcceecchhhHHHHHHHHHHHHHHhcCC
Q 025464 210 SW-TWTNHWVYWLGPFIGAAIAAIVYDHIFIDD 241 (252)
Q Consensus 210 ~~-~~~~~~vy~~~p~~Ga~la~~l~~~~~~~~ 241 (252)
+. .|.+...|+++|++|+++|+.+.+.+++..
T Consensus 123 g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~ 155 (279)
T 2w2e_A 123 RAIPPFRGILMAFTQIVAGMAAAGAASAMTPGE 155 (279)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 76 788999999999999999999999998764
No 22
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.42 E-value=1.2e-13 Score=115.70 Aligned_cols=101 Identities=17% Similarity=0.237 Sum_probs=82.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCC--CCC-CCC--cchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhc-CC
Q 025464 140 SSWNAVVFEIVMTFGLVYTVYATAVDP--KKG-NLG--TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW 213 (252)
Q Consensus 140 s~~~~~~~E~~~t~~l~~~v~~~~~~~--~~~-~~~--~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~-~~ 213 (252)
+.+|.++.|+++|++|++..+.++... +.+ +.. ....+..|+.+++.+++.+++||+|+|||.+++..+.+. .|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 357899999999999999888754421 111 111 234567899999999999999999999999999999876 68
Q ss_pred CcceecchhhHHHHHHHHHHHHHHhcC
Q 025464 214 TNHWVYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 214 ~~~~vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
.+...|+++|++|+++|+.+.+.++++
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~ 108 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPP 108 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 899999999999999999999888764
No 23
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.42 E-value=9.7e-14 Score=118.77 Aligned_cols=101 Identities=20% Similarity=0.212 Sum_probs=82.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCC-cchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhc-CCCc
Q 025464 140 SSWNAVVFEIVMTFGLVYTVYATAVD--PKKGNLG-TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWTN 215 (252)
Q Consensus 140 s~~~~~~~E~~~t~~l~~~v~~~~~~--~~~~~~~-~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~-~~~~ 215 (252)
+..+.++.|+++|++|++....++.. +.+...+ ....+..|+.+++.+++.+++||+|+|||++++..+.+. .|.+
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 87 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKK 87 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHH
Confidence 56789999999999999986654321 1111111 124567789999999999999999999999999999876 7999
Q ss_pred ceecchhhHHHHHHHHHHHHHHhcC
Q 025464 216 HWVYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 216 ~~vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
...|+++|++|+++|+.+.+.++++
T Consensus 88 ~~~Yi~AQ~lGa~~ga~l~~~~~~~ 112 (258)
T 3c02_A 88 IPVYFFAQLLGAFVGTSTVYGLYHG 112 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcch
Confidence 9999999999999999999998875
No 24
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.42 E-value=1.6e-13 Score=118.15 Aligned_cols=101 Identities=22% Similarity=0.367 Sum_probs=82.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCC-------CC-CCCC--cchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHh
Q 025464 140 SSWNAVVFEIVMTFGLVYTVYATAVDP-------KK-GNLG--TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 209 (252)
Q Consensus 140 s~~~~~~~E~~~t~~l~~~v~~~~~~~-------~~-~~~~--~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~ 209 (252)
+.++.++.|+++|++|++..+.++... +. .... ....+..|+.+++.+++.+++||+|+|||++++..+.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 457889999999999999877653210 11 1111 2356778999999999999999999999999999998
Q ss_pred hc-CCCcceecchhhHHHHHHHHHHHHHHhcC
Q 025464 210 SW-TWTNHWVYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 210 ~~-~~~~~~vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
+. .|.+...|+++|++|+++|+.+.+.++.+
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 76 68899999999999999999999988864
No 25
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.41 E-value=2.1e-13 Score=118.84 Aligned_cols=101 Identities=21% Similarity=0.279 Sum_probs=82.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcC---CCC-CCCC--cchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhc-C
Q 025464 140 SSWNAVVFEIVMTFGLVYTVYATAVD---PKK-GNLG--TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-T 212 (252)
Q Consensus 140 s~~~~~~~E~~~t~~l~~~v~~~~~~---~~~-~~~~--~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~-~ 212 (252)
+..+.+++|+++|++|++....++.. .++ .... ....+..|+.+++.+++.+++||+|+|||++++..+.+. .
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 56789999999999999987664322 111 1111 124567889999999999999999999999999999876 6
Q ss_pred CCcceecchhhHHHHHHHHHHHHHHhcC
Q 025464 213 WTNHWVYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 213 ~~~~~vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
|.+...|+++|++|+++|+.+.+.++++
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 166 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKG 166 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8899999999999999999999998865
No 26
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.41 E-value=2e-13 Score=118.27 Aligned_cols=101 Identities=16% Similarity=0.119 Sum_probs=82.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCcchhHHHHHHHHHHHHHcCCCCCccccccchHHHHHhhc-CCCc
Q 025464 140 SSWNAVVFEIVMTFGLVYTVYATAVD---PKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWTN 215 (252)
Q Consensus 140 s~~~~~~~E~~~t~~l~~~v~~~~~~---~~~~~~~~~~~~~ig~~v~~~~~~~~~~tg~~lNPA~~l~~~~~~~-~~~~ 215 (252)
+..+.++.|+++|++|++....++.. ++.........+..|+.+++.+++.+++||+|+|||++++..+.+. .|.+
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 85 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK 85 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHH
Confidence 56789999999999999976653221 1111111235677899999999999999999999999999999876 7999
Q ss_pred ceecchhhHHHHHHHHHHHHHHhcC
Q 025464 216 HWVYWLGPFIGAAIAAIVYDHIFID 240 (252)
Q Consensus 216 ~~vy~~~p~~Ga~la~~l~~~~~~~ 240 (252)
...|+++|++|+++|+.+.+.++++
T Consensus 86 ~~~Yi~AQ~lGA~~ga~l~~~~~~~ 110 (281)
T 1ldf_A 86 VIPFIVSQVAGAFCAAALVYGLYYN 110 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999888865
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=91.28 E-value=6.2 Score=33.49 Aligned_cols=102 Identities=18% Similarity=0.263 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhh--CCC----c--
Q 025464 58 LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFST--GGL----E-- 129 (252)
Q Consensus 58 ~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~--~~~----~-- 129 (252)
-+..++.+.+++...+...+..-=+ |=-.+ ...+.||.+|++.+--|.-=.+|=++|++++-++. .+. +
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTg--n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTS--TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTT--THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTH
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc--chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchH
Confidence 3455677778877777766554322 42223 33457888988876555555555555555443331 110 0
Q ss_pred cc-----ccccCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 025464 130 TS-----AFALSSGVSSWNAVVFEIVMTFGLVYTVYAT 162 (252)
Q Consensus 130 ~~-----~~~~~~~~s~~~~~~~E~~~t~~l~~~v~~~ 162 (252)
.. .....-+.+..+.|+-=++|-.+..+++...
T Consensus 145 ~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 182 (285)
T 3kcu_A 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0001224467788888888888888888763
No 28
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=71.29 E-value=44 Score=27.89 Aligned_cols=104 Identities=16% Similarity=0.233 Sum_probs=59.6
Q ss_pred chhHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhh--CCCc-ccc
Q 025464 56 AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFST--GGLE-TSA 132 (252)
Q Consensus 56 ~~~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~--~~~~-~~~ 132 (252)
...+..++.+.+++...+...+..-=+ |=.......+.||.+|++.+--|.-=.+|=++|+++.-++. .+.. .+.
T Consensus 62 ~~~ll~g~~F~~Gl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~ 139 (268)
T 3tds_E 62 MTKIVMGLSFAIALSLVIMTGTELFTG--NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGP 139 (268)
T ss_dssp THHHHHHHTCTHHHHHHHHHTCCCHHH--HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcH
Confidence 344556677777777776654332111 33322234578889998887777766677777666554433 1111 100
Q ss_pred c-----c---cCCCCchHHHHHHHHHHHHHHHHHHHH
Q 025464 133 F-----A---LSSGVSSWNAVVFEIVMTFGLVYTVYA 161 (252)
Q Consensus 133 ~-----~---~~~~~s~~~~~~~E~~~t~~l~~~v~~ 161 (252)
. . ..-+.+..+.|+-=++|-.+...++..
T Consensus 140 ~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~ 176 (268)
T 3tds_E 140 VAEFFANTAASKASMPFTALFFRGILCNILVCVSVLC 176 (268)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 011346677777777888888888776
No 29
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=61.86 E-value=71 Score=26.79 Aligned_cols=101 Identities=15% Similarity=0.261 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhcc-cCCcCchHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhh--CCC---ccc
Q 025464 58 LISASLAHAFALFVAVSVGANI-SGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFST--GGL---ETS 131 (252)
Q Consensus 58 ~~~~a~~~g~~~~~~i~~~~~i-sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~--~~~---~~~ 131 (252)
-+..++.+.+++...+...+.. +|--+ .++ ..+.+|.+|++.+--|.-=.+|=++|++++-++. .+. ..+
T Consensus 67 ~ll~g~~F~vGL~lVvl~g~ELFTgn~l---~~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~ 142 (280)
T 3kly_A 67 KLLGGLAFSLGLILVVITGGELFTSSVL---ILV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGG 142 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCTTTTCC---CCS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTT
T ss_pred HHHHHHHHHHHHHHHHHccccccccchH---HHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCch
Confidence 3456777788888777766553 33323 222 2457888988877777666666666666554332 110 000
Q ss_pred --------ccccCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 025464 132 --------AFALSSGVSSWNAVVFEIVMTFGLVYTVYAT 162 (252)
Q Consensus 132 --------~~~~~~~~s~~~~~~~E~~~t~~l~~~v~~~ 162 (252)
.....-+.+..+.|+-=++|-.+..+++...
T Consensus 143 ~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 181 (280)
T 3kly_A 143 QLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMT 181 (280)
T ss_dssp HHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011124467788888888888888888763
No 30
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=40.61 E-value=5.7 Score=34.41 Aligned_cols=20 Identities=30% Similarity=0.413 Sum_probs=16.3
Q ss_pred cccCCcCchHHHHHHHHhcc
Q 025464 78 NISGGHVNPAVTFGAFVGGH 97 (252)
Q Consensus 78 ~isGah~NPavTl~~~~~g~ 97 (252)
.-||||++|+++++-.+..+
T Consensus 10 GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 10 GGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CSSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHhC
Confidence 34789999999999888643
No 31
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=37.51 E-value=1.7e+02 Score=24.08 Aligned_cols=103 Identities=11% Similarity=0.147 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccCCcCchHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhh--CCCc-ccc--
Q 025464 58 LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFST--GGLE-TSA-- 132 (252)
Q Consensus 58 ~~~~a~~~g~~~~~~i~~~~~isGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~--~~~~-~~~-- 132 (252)
.+..++.+.+++...+...+..-=+ |=.......+.||.+|++.+--|.-=.+|=++|++++-++. .+.. .+.
T Consensus 58 ~ll~g~~F~vGl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~ 135 (261)
T 4fc4_A 58 PLVMGATFGIALTLVIIAGSELFTG--HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDT 135 (261)
T ss_dssp HHHHHHHTTHHHHHHHHTCCCCHHH--HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHHcCCccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHH
Confidence 4555677777777666543332101 43322234457889998888777666666666665543332 1110 000
Q ss_pred -c--cc---CCCCchHHHHHHHHHHHHHHHHHHHHH
Q 025464 133 -F--AL---SSGVSSWNAVVFEIVMTFGLVYTVYAT 162 (252)
Q Consensus 133 -~--~~---~~~~s~~~~~~~E~~~t~~l~~~v~~~ 162 (252)
. .. .-+.+..+.|+-=++|-++...++...
T Consensus 136 ~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 171 (261)
T 4fc4_A 136 SIVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMA 171 (261)
T ss_dssp SHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 012245666766677787777777663
Done!