BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025467
(252 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 186 bits (471), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 143/243 (58%), Gaps = 42/243 (17%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+HD + HTDLKPEN+L V+S+Y + +L +D +R KS+A++V+DFGS T
Sbjct: 153 LHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSAT 204
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
++ + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E G LFQTH+N EHLAM
Sbjct: 205 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 264
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
MER+LGP+P M+++ + +KY RGRLDW E ++ G +V
Sbjct: 265 MERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSA-------------------GRYV 303
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
+ C R + L + +H L L++ +L Y+P RLT EAL+HPF
Sbjct: 304 --RENCKPLR---------RYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPF 350
Query: 245 FTR 247
F R
Sbjct: 351 FAR 353
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 177 bits (450), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 139/241 (57%), Gaps = 42/241 (17%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + HTDLKPEN+L V S+Y + + K +D +R + IKV+DFGS T
Sbjct: 134 LHSNKLTHTDLKPENILFVQSDYTEAYNPK----IKRD----ERTLINPDIKVVDFGSAT 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
Y+ + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E G +F TH++ EHLAM
Sbjct: 186 YDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
MER+LGPLP+HM+++ + KY RLDW E +++ G +V
Sbjct: 246 MERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSA-------------------GRYV 284
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
R + F ++ Q V+H L L+Q +L YDP R+T REAL+HPF
Sbjct: 285 S--------RACKPLKEF---MLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPF 331
Query: 245 F 245
F
Sbjct: 332 F 332
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 174 bits (440), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 137/241 (56%), Gaps = 42/241 (17%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + HTDLKPEN+L V S+Y + + K +D +R + IKV+DFGS T
Sbjct: 134 LHSNKLTHTDLKPENILFVQSDYTEAYNPK----IKRD----ERTLINPDIKVVDFGSAT 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
Y+ + +V RHYRAPEVIL LGW+ PCD+WS+GCIL+E G +F TH++ EHLAM
Sbjct: 186 YDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
MER+LGPLP+HM+++ + KY RLDW E +++ G +V
Sbjct: 246 MERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSA-------------------GRYV 284
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
R + F ++ Q V+H L L+Q +L YDP R+T REAL+HPF
Sbjct: 285 S--------RACKPLKEF---MLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPF 331
Query: 245 F 245
F
Sbjct: 332 F 332
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 132/242 (54%), Gaps = 42/242 (17%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ + HTDLKPEN+L V+SE+ +L+ S K + K+++I+V DFGS T
Sbjct: 171 LHENQLTHTDLKPENILFVNSEF-------ETLYNEHKSCEEKSV-KNTSIRVADFGSAT 222
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
++ IV+TRHYR PEVIL LGW PCD+WS+GCIL E G LFQTHEN EHL M
Sbjct: 223 FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 282
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
ME++LGP+P HM+ R + +KY +G L W E ++ +K K
Sbjct: 283 MEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKENCK-------------- 326
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
+ S+ ++HV L L++ +L +DP R+T EAL HPF
Sbjct: 327 -------------PLKSYMLQDSLEHV-----QLFDLMRRMLEFDPAQRITLAEALLHPF 368
Query: 245 FT 246
F
Sbjct: 369 FA 370
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 132/242 (54%), Gaps = 42/242 (17%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ + HTDLKPEN+L V+SE+ +L+ S K + K+++I+V DFGS T
Sbjct: 148 LHENQLTHTDLKPENILFVNSEF-------ETLYNEHKSCEEKSV-KNTSIRVADFGSAT 199
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
++ IV+TRHYR PEVIL LGW PCD+WS+GCIL E G LFQTHEN EHL M
Sbjct: 200 FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 259
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
ME++LGP+P HM+ R + +KY +G L W E ++ +K K
Sbjct: 260 MEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKENCK-------------- 303
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
+ S+ ++HV L L++ +L +DP R+T EAL HPF
Sbjct: 304 -------------PLKSYMLQDSLEHV-----QLFDLMRRMLEFDPAQRITLAEALLHPF 345
Query: 245 FT 246
F
Sbjct: 346 FA 347
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 132/242 (54%), Gaps = 42/242 (17%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ + HTDLKPEN+L V+SE+ +L+ S K + K+++I+V DFGS T
Sbjct: 139 LHENQLTHTDLKPENILFVNSEF-------ETLYNEHKSCEEKSV-KNTSIRVADFGSAT 190
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
++ IV+TRHYR PEVIL LGW PCD+WS+GCIL E G LFQTHEN EHL M
Sbjct: 191 FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 250
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
ME++LGP+P HM+ R + +KY +G L W E ++ +K K
Sbjct: 251 MEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKENCK-------------- 294
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
+ S+ ++HV L L++ +L +DP R+T EAL HPF
Sbjct: 295 -------------PLKSYMLQDSLEHV-----QLFDLMRRMLEFDPAQRITLAEALLHPF 336
Query: 245 FT 246
F
Sbjct: 337 FA 338
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 147 bits (370), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 113/180 (62%), Gaps = 14/180 (7%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM----PKSSAIKVIDF 60
+ + + HTDLKPEN+LL P ++ SL T + + K++ KS+ IK+IDF
Sbjct: 153 LRKMSLTHTDLKPENILLDD------PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDF 206
Query: 61 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
G T++ I++TR YRAPEVIL LGW D+WS GC+L EL TG LF+THE++E
Sbjct: 207 GCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHME 266
Query: 121 HLAMMERVLGPLPQHMLKRVDR-HAEKYVRRG--RLDWPEGAASRESIKSVMK-LPRLQV 176
HLAMME ++ P+P++ML + + KYV + +L WPE A+S SIK V K LP ++
Sbjct: 267 HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKI 326
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 47/251 (18%)
Query: 1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
+F +L +IH DLKPEN+LL + PK SAIK++DF
Sbjct: 152 LFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDF 186
Query: 61 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
GS+ + +R YR+PEV+LG+ + D+WS+GCILVE+ TGE LF ++
Sbjct: 187 GSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 246
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR----LQV 176
+ + VLG P H+L + + A K+ + P+G + + K + + ++
Sbjct: 247 QMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTRKL 301
Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
G G A +A + + L+ +L YDP R+
Sbjct: 302 HNILGVETGGPGGRRAGESGHTVADYLK-------------FKDLILRMLDYDPKTRIQP 348
Query: 237 REALRHPFFTR 247
AL+H FF +
Sbjct: 349 YYALQHSFFKK 359
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 47/251 (18%)
Query: 1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
+F +L +IH DLKPEN+LL + PK SAIK++DF
Sbjct: 171 LFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDF 205
Query: 61 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
GS+ + +R YR+PEV+LG+ + D+WS+GCILVE+ TGE LF ++
Sbjct: 206 GSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 265
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR----LQV 176
+ + VLG P H+L + + A K+ + P+G + + K + + ++
Sbjct: 266 QMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTRKL 320
Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
G G A +A + + L+ +L YDP R+
Sbjct: 321 HNILGVETGGPGGRRAGESGHTVADYLK-------------FKDLILRMLDYDPKTRIQP 367
Query: 237 REALRHPFFTR 247
AL+H FF +
Sbjct: 368 YYALQHSFFKK 378
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 47/251 (18%)
Query: 1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
+F +L +IH DLKPEN+LL + PK AIK++DF
Sbjct: 171 LFLATPELSIIHCDLKPENILLCN-------------------------PKRXAIKIVDF 205
Query: 61 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
GS+ + +R YR+PEV+LG+ + D+WS+GCILVE+ TGE LF ++
Sbjct: 206 GSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 265
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR----LQV 176
+ + VLG P H+L + + A K+ + P+G + + K + + ++
Sbjct: 266 QMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTRKL 320
Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
G G A +A + + L+ +L YDP R+
Sbjct: 321 HNILGVETGGPGGRRAGESGHTVADYLK-------------FKDLILRMLDYDPKTRIQP 367
Query: 237 REALRHPFFTR 247
AL+H FF +
Sbjct: 368 YYALQHSFFKK 378
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 100/246 (40%), Gaps = 48/246 (19%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H +IH DLKPEN+LL + S IKVIDFGS+
Sbjct: 215 ALHKNRIIHCDLKPENILL-------------------------KQQGRSGIKVIDFGSS 249
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
YE + +R YRAPEVILG + P D+WS+GCIL EL TG L + + LA
Sbjct: 250 CYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA 309
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR--LQVPFFYG 181
M +LG +P L + A+ +V S PR G
Sbjct: 310 CMIELLG-MPSQKLLDASKRAKNFV------------------SXKGYPRYCTVTTLSDG 350
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
S V G + S ++ D L+ L +DP R+T +ALR
Sbjct: 351 SVVLNGGRSRRGKLRGPPESREWGNALKGCDDPL--FLDFLKQCLEWDPAVRMTPGQALR 408
Query: 242 HPFFTR 247
HP+ R
Sbjct: 409 HPWLRR 414
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 100/246 (40%), Gaps = 48/246 (19%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H +IH DLKPEN+LL + S IKVIDFGS+
Sbjct: 215 ALHKNRIIHCDLKPENILL-------------------------KQQGRSGIKVIDFGSS 249
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
YE + +R YRAPEVILG + P D+WS+GCIL EL TG L + + LA
Sbjct: 250 CYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA 309
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR--LQVPFFYG 181
M +LG +P L + A+ +V S PR G
Sbjct: 310 CMIELLG-MPXQKLLDASKRAKNFV------------------SXKGYPRYCTVTTLSDG 350
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
S V G + S ++ D L+ L +DP R+T +ALR
Sbjct: 351 SVVLNGGRSRRGKLRGPPESREWGNALKGCDDPL--FLDFLKQCLEWDPAVRMTPGQALR 408
Query: 242 HPFFTR 247
HP+ R
Sbjct: 409 HPWLRR 414
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 100/246 (40%), Gaps = 48/246 (19%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H +IH DLKPEN+LL + S IKVIDFGS+
Sbjct: 215 ALHKNRIIHCDLKPENILL-------------------------KQQGRSGIKVIDFGSS 249
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
YE + +R YRAPEVILG + P D+WS+GCIL EL TG L + + LA
Sbjct: 250 CYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA 309
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR--LQVPFFYG 181
M +LG +P L + A+ +V S PR G
Sbjct: 310 CMIELLG-MPSQKLLDASKRAKNFV------------------SXKGYPRYCTVTTLSDG 350
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
S V G + S ++ D L+ L +DP R+T +ALR
Sbjct: 351 SVVLNGGRSRRGKLRGPPESREWGNALKGCDDPL--FLDFLKQCLEWDPAVRMTPGQALR 408
Query: 242 HPFFTR 247
HP+ R
Sbjct: 409 HPWLRR 414
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 67/272 (24%)
Query: 5 MHDLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSLHTPKDSSYFKRMPKSSA--- 54
+H C +IHTD+KPEN+LL V+ +YI+ +++ S P S P ++
Sbjct: 146 LHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFL 205
Query: 55 -------------IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC 101
+K+ D G+ + + TR YR+ EV++G G+ P DIWS C
Sbjct: 206 VNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTAC 265
Query: 102 ILVELCTGEALFQTHENLE------HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW 155
+ EL TG+ LF+ H E H+A++ +LG +P+ ++ E + ++G L
Sbjct: 266 MAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL-- 323
Query: 156 PEGAASRESIKSVMKLPRLQVPFFYGSF-VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS 214
K + KL +G F V + Y +
Sbjct: 324 ----------KHITKLKP------WGLFEVLVEKY-------------------EWSQEE 348
Query: 215 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 246
A T L +L P R TA E LRHP+
Sbjct: 349 AAGFTDFLLPMLELIPEKRATAAECLRHPWLN 380
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 67/272 (24%)
Query: 5 MHDLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSLHTPKDSSYFKRMPKSSA--- 54
+H C +IHTD+KPEN+LL V+ +YI+ +++ S P S P ++
Sbjct: 162 LHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFL 221
Query: 55 -------------IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC 101
+K+ D G+ + + TR YR+ EV++G G+ P DIWS C
Sbjct: 222 VNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTAC 281
Query: 102 ILVELCTGEALFQTHENLE------HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW 155
+ EL TG+ LF+ H E H+A++ +LG +P+ ++ E + ++G L
Sbjct: 282 MAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL-- 339
Query: 156 PEGAASRESIKSVMKLPRLQVPFFYGSF-VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS 214
K + KL +G F V + Y +
Sbjct: 340 ----------KHITKLKP------WGLFEVLVEKY-------------------EWSQEE 364
Query: 215 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 246
A T L +L P R TA E LRHP+
Sbjct: 365 AAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 110/269 (40%), Gaps = 63/269 (23%)
Query: 5 MHDLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSLHTPKDSSYFKRMPKSSA--- 54
+H C +IHTD+KPEN+L+ V Y++ +++ + P S P +
Sbjct: 156 LHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVN 215
Query: 55 -----------IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
+K+ D G+ + + TR YR+ EV++G G++ P DIWS C+
Sbjct: 216 PLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMA 275
Query: 104 VELCTGEALFQTHE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE 157
EL TG+ LF+ H + +H+A + +LG +P+H E + RRG L
Sbjct: 276 FELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGEL---- 331
Query: 158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGD 217
+ +L+ + VE G+ H D A
Sbjct: 332 -----------RHITKLKPWSLFDVLVEKYGW-------------------PHED--AAQ 359
Query: 218 LTHLLQGLLRYDPTDRLTAREALRHPFFT 246
T L +L P R +A E LRHP+
Sbjct: 360 FTDFLIPMLEMVPEKRASAGECLRHPWLN 388
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 117/248 (47%), Gaps = 45/248 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H D+KP N+LL + ++KV D+ S +P S +F
Sbjct: 125 LHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD-- 182
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
++P V+TR YRAPE++LG +T D+WS+GCIL E+ G+ +F + L
Sbjct: 183 -DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL- 240
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
ER++G +D+P S E ++S+ Q P F +
Sbjct: 241 --ERIIGV---------------------IDFP----SNEDVESI------QSP-FAKTM 266
Query: 184 VEFKGYCLAFRCTDCIASFC--QNLIMQHVDHSAG---DLTHLLQGLLRYDPTDRLTARE 238
+E + R ++ F +NL+++ ++ A + LL LL+++P R++A +
Sbjct: 267 IESLKEKVEIRQSNKRDIFTKWKNLLLK-INPKADCNEEALDLLDKLLQFNPNKRISAND 325
Query: 239 ALRHPFFT 246
AL+HPF +
Sbjct: 326 ALKHPFVS 333
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 170 IHSADIIHRDLKPSNLAV---------------------------NEDCELKILDFGLAR 202
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF +++ L
Sbjct: 203 HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQ 262
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
+ R+ G P ++ R+ H +R I S+ ++P+
Sbjct: 263 QIMRLTGTPPASVISRMPSH----------------EARNYINSLPQMPK---------- 296
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ + F + +A VD LL+ +L D R+TA EAL HP
Sbjct: 297 ---RNFADVFIGANPLA----------VD--------LLEKMLVLDTDKRITASEALAHP 335
Query: 244 FFTRDH 249
+F++ H
Sbjct: 336 YFSQYH 341
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 5 MHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
MH C +IHTD+KPENVL+ E + P+ IK+ D G+
Sbjct: 147 MHRRCGIIHTDIKPENVLM---EIVDSPE------------------NLIQIKIADLGNA 185
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE------ 117
+ + TR YR+PEV+LG W DIWS C++ EL TG+ LF+ E
Sbjct: 186 CWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245
Query: 118 NLEHLAMMERVLGPLPQHMLKR 139
+ +H+A + +LG LP ++L+
Sbjct: 246 DDDHIAQIIELLGELPSYLLRN 267
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 101/256 (39%), Gaps = 86/256 (33%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + + H D+KP+N+LL P S +K+IDFG
Sbjct: 154 LAYIHSIGICHRDIKPQNLLL--------------------------DPPSGVLKLIDFG 187
Query: 62 STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ + I S R+YRAPE+I G +T DIWS GC++ EL G+ LF
Sbjct: 188 SAKILIAGEPNVSXICS-RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + +VL G SRE IK+ +
Sbjct: 247 GIDQLVEIIKVL----------------------------GTPSREQIKT------MNPN 272
Query: 178 FFYGSFVEFK--GYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT 235
+ F + + + FR + D L+ LL Y P+ RLT
Sbjct: 273 YMEHKFPQIRPHPFSKVFR-----------------PRTPPDAIDLISRLLEYTPSARLT 315
Query: 236 AREALRHPFFTRDHLR 251
A EAL HPFF D LR
Sbjct: 316 AIEALCHPFF--DELR 329
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 5 MHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
MH C +IHTD+KPENVL+ E + P+ IK+ D G+
Sbjct: 147 MHRRCGIIHTDIKPENVLM---EIVDSPE------------------NLIQIKIADLGNA 185
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE------ 117
+ + TR YR+PEV+LG W DIWS C++ EL TG+ LF+ E
Sbjct: 186 CWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245
Query: 118 NLEHLAMMERVLGPLPQHMLKR 139
+ +H+A + +LG LP ++L+
Sbjct: 246 DDDHIAQIIELLGELPSYLLRN 267
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + S +K++DFG
Sbjct: 143 IHSADIIHRDLKPSNL---------------------------AVNEDSELKILDFGLAR 175
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 176 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 235
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 236 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 270
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 271 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 308
Query: 244 FFTRDH 249
+F + H
Sbjct: 309 YFAQYH 314
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + S +K++DFG
Sbjct: 147 IHSADIIHRDLKPSNL---------------------------AVNEDSELKILDFGLAR 179
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 180 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 239
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 240 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 275 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 312
Query: 244 FFTRDH 249
+F + H
Sbjct: 313 YFAQYH 318
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 98/246 (39%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 144 IHAAGIIHRDLKPGNLAV---------------------------NEDCELKILDFGLAR 176
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ V TR YRAPEVIL + +T DIWSVGCI+ E+ TG+ LF+ ++L+ L
Sbjct: 177 QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
+ +V G P ++R+ K +G LP L+ F
Sbjct: 237 EIMKVTGTPPAEFVQRLQSDEAKNYMKG-------------------LPELEKKDF---- 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
AS N ++ +LL+ +L D R+TA EAL HP
Sbjct: 274 ----------------ASILTN--------ASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309
Query: 244 FFTRDH 249
+F H
Sbjct: 310 YFESLH 315
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + S +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDSELKILDFGLCR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 146 IHSADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLAR 178
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 179 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 238
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 239 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 274 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 311
Query: 244 FFTRDH 249
+F + H
Sbjct: 312 YFAQYH 317
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 152 IHSADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLAR 184
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 185 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 244
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 245 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 279
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 280 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 317
Query: 244 FFTRDH 249
+F + H
Sbjct: 318 YFAQYH 323
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 146 IHSADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLAR 178
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 179 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 238
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 239 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 274 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 311
Query: 244 FFTRDH 249
+F + H
Sbjct: 312 YFAQYH 317
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 148 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 180
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 240
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 241 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 275
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 276 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 313
Query: 244 FFTRDH 249
+F + H
Sbjct: 314 YFAQYH 319
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 152 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 184
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 185 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 244
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 245 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 279
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 280 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 317
Query: 244 FFTRDH 249
+F + H
Sbjct: 318 YFAQYH 323
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 148 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 180
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 240
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 241 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 275
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 276 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 313
Query: 244 FFTRDH 249
+F + H
Sbjct: 314 YFAQYH 319
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 147 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 179
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 180 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 239
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 240 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 275 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 312
Query: 244 FFTRDH 249
+F + H
Sbjct: 313 YFAQYH 318
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 153 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 185
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 186 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 245
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 246 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 280
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 281 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 318
Query: 244 FFTRDH 249
+F + H
Sbjct: 319 YFAQYH 324
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 153 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 185
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 186 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 245
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 246 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 280
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 281 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 318
Query: 244 FFTRDH 249
+F + H
Sbjct: 319 YFAQYH 324
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 153 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 185
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 186 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 245
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 246 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 280
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 281 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 318
Query: 244 FFTRDH 249
+F + H
Sbjct: 319 YFAQYH 324
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 148 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 180
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 240
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 241 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 275
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 276 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 313
Query: 244 FFTRDH 249
+F + H
Sbjct: 314 YFAQYH 319
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 143 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 175
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 176 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 235
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 236 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 270
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 271 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 308
Query: 244 FFTRDH 249
+F + H
Sbjct: 309 YFAQYH 314
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 137 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 169
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 230 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 264
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 265 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 302
Query: 244 FFTRDH 249
+F + H
Sbjct: 303 YFAQYH 308
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 146 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 178
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 179 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 238
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 239 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 274 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 311
Query: 244 FFTRDH 249
+F + H
Sbjct: 312 YFAQYH 317
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 140 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 172
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 173 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 232
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 233 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 267
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 268 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 305
Query: 244 FFTRDH 249
+F + H
Sbjct: 306 YFAQYH 311
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 143 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 175
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 176 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 235
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 236 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 270
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 271 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 308
Query: 244 FFTRDH 249
+F + H
Sbjct: 309 YFAQYH 314
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 138 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 170
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 171 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 230
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 231 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 266 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 303
Query: 244 FFTRDH 249
+F + H
Sbjct: 304 YFAQYH 309
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 147 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 179
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 180 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 239
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 240 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A VD LL+ +L D R+TA +AL H
Sbjct: 275 ----NFANVFIGANPLA----------VD--------LLEKMLVLDSDKRITAAQALAHA 312
Query: 244 FFTRDH 249
+F + H
Sbjct: 313 YFAQYH 318
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 146 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 178
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 179 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 238
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 239 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 274 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 311
Query: 244 FFTRDH 249
+F + H
Sbjct: 312 YFAQYH 317
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 151 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 183
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 184 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 243
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 244 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 278
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 279 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 316
Query: 244 FFTRDH 249
+F + H
Sbjct: 317 YFAQYH 322
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 138 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 170
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 171 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 230
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 231 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 266 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 303
Query: 244 FFTRDH 249
+F + H
Sbjct: 304 YFAQYH 309
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 161 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 193
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 194 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 253
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 254 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 288
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A VD LL+ +L D R+TA +AL H
Sbjct: 289 ----NFANVFIGANPLA----------VD--------LLEKMLVLDSDKRITAAQALAHA 326
Query: 244 FFTRDH 249
+F + H
Sbjct: 327 YFAQYH 332
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 139 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 171
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 172 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 231
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 232 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 266
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 267 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 304
Query: 244 FFTRDH 249
+F + H
Sbjct: 305 YFAQYH 310
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 148 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 180
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 181 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 240
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 241 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 275
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 276 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 313
Query: 244 FFTRDH 249
+F + H
Sbjct: 314 YFAQYH 319
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 164 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 196
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 197 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 256
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 257 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 291
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 292 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 329
Query: 244 FFTRDH 249
+F + H
Sbjct: 330 YFAQYH 335
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 147 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 179
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 180 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 239
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 240 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A VD LL+ +L D R+TA +AL H
Sbjct: 275 ----NFANVFIGANPLA----------VD--------LLEKMLVLDSDKRITAAQALAHA 312
Query: 244 FFTRDH 249
+F + H
Sbjct: 313 YFAQYH 318
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 137 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 169
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 170 HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 230 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 264
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 265 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 302
Query: 244 FFTRDH 249
+F + H
Sbjct: 303 YFAQYH 308
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 160 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 192
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 193 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 252
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 253 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 287
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 288 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 325
Query: 244 FFTRDH 249
+F + H
Sbjct: 326 YFAQYH 331
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 160 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 192
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 193 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 252
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 253 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 287
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A VD LL+ +L D R+TA +AL H
Sbjct: 288 ----NFANVFIGANPLA----------VD--------LLEKMLVLDSDKRITAAQALAHA 325
Query: 244 FFTRDH 249
+F + H
Sbjct: 326 YFAQYH 331
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 161 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 193
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 194 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 253
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 254 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 288
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 289 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 326
Query: 244 FFTRDH 249
+F + H
Sbjct: 327 YFAQYH 332
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 143 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 175
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 176 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 235
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 236 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 270
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 271 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 308
Query: 244 FFTRDH 249
+F + H
Sbjct: 309 YFAQYH 314
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 137 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 169
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 230 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 264
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 265 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 302
Query: 244 FFTRDH 249
+F + H
Sbjct: 303 YFAQYH 308
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 137 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 169
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 230 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 264
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 265 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 302
Query: 244 FFTRDH 249
+F + H
Sbjct: 303 YFAQYH 308
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 164 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 196
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 197 HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 256
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 257 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 291
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 292 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 329
Query: 244 FFTRDH 249
+F + H
Sbjct: 330 YFAQYH 335
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 98/243 (40%), Gaps = 77/243 (31%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+ + + +K++DFG
Sbjct: 142 IHSAGVVHRDLKPGNL---------------------------AVNEDCELKILDFGLAR 174
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V TR YRAPEVIL + + DIWSVGCI+ E+ TG+ LF+ + L+ L
Sbjct: 175 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 234
Query: 124 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
+ +V G P + + K D+ A+ Y I+S+ + PR
Sbjct: 235 QILKVTGVPGTEFVQKLNDKAAKSY-----------------IQSLPQTPR--------- 268
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
F Q + A D LL+ +L D RLTA +AL H
Sbjct: 269 -----------------KDFTQ--LFPRASPQAAD---LLEKMLELDVDKRLTAAQALTH 306
Query: 243 PFF 245
PFF
Sbjct: 307 PFF 309
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++DFG
Sbjct: 161 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 193
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 194 HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 253
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 254 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 288
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 289 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 326
Query: 244 FFTRDH 249
+F + H
Sbjct: 327 YFAQYH 332
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + +K+ DY + HT + + +
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY------------------ 182
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 183 ---------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 98/243 (40%), Gaps = 77/243 (31%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+ + + +K++DFG
Sbjct: 160 IHSAGVVHRDLKPGNLAV---------------------------NEDCELKILDFGLAR 192
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V TR YRAPEVIL + + DIWSVGCI+ E+ TG+ LF+ + L+ L
Sbjct: 193 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 252
Query: 124 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
+ +V G P + + K D+ A+ Y I+S+ + PR
Sbjct: 253 QILKVTGVPGTEFVQKLNDKAAKSY-----------------IQSLPQTPR--------- 286
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
F Q + A D LL+ +L D RLTA +AL H
Sbjct: 287 -----------------KDFTQ--LFPRASPQAAD---LLEKMLELDVDKRLTAAQALTH 324
Query: 243 PFF 245
PFF
Sbjct: 325 PFF 327
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 99/247 (40%), Gaps = 77/247 (31%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP NV + + S ++++DFG
Sbjct: 147 IHSAGIIHRDLKPSNVAV---------------------------NEDSELRILDFGLAR 179
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ V+TR YRAPE++L + + DIWSVGCI+ EL G+ALF + ++ L
Sbjct: 180 QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 239
Query: 124 -MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
+ME V P P+ + K HA Y I+S+ +P+
Sbjct: 240 RIMEVVGTPSPEVLAKISSEHARTY-----------------IQSLPPMPQ--------- 273
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
K FR + +A LL +L D R++A EAL H
Sbjct: 274 ----KDLSSIFRGANPLA------------------IDLLGRMLVLDSDQRVSAAEALAH 311
Query: 243 PFFTRDH 249
+F++ H
Sbjct: 312 AYFSQYH 318
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 99/247 (40%), Gaps = 77/247 (31%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP NV + + S ++++DFG
Sbjct: 147 IHSAGIIHRDLKPSNVAV---------------------------NEDSELRILDFGLAR 179
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ V+TR YRAPE++L + + DIWSVGCI+ EL G+ALF + ++ L
Sbjct: 180 QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 239
Query: 124 -MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
+ME V P P+ + K HA Y I+S+ +P+
Sbjct: 240 RIMEVVGTPSPEVLAKISSEHARTY-----------------IQSLPPMPQ--------- 273
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
K FR + +A LL +L D R++A EAL H
Sbjct: 274 ----KDLSSIFRGANPLA------------------IDLLGRMLVLDSDQRVSAAEALAH 311
Query: 243 PFFTRDH 249
+F++ H
Sbjct: 312 AYFSQYH 318
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ G LF ++++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV P+
Sbjct: 237 VIEQLGTPSPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
+
Sbjct: 320 YIN 322
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + +K+ D+ + HT + + +
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY------------------ 182
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 183 ---------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ G LF ++++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV P+
Sbjct: 237 VIEQLGTPSPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
+
Sbjct: 320 YIN 322
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 103/242 (42%), Gaps = 61/242 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ + ++++ +F T
Sbjct: 140 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG--------------LARTAST---NFMMTP 182
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
Y V TR+YRAPEVILG+G+ DIWSVGCI+ EL G +FQ ++++
Sbjct: 183 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNK 234
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
+ LG + + YV R +P G A E L + + S
Sbjct: 235 VIEQLGTPSAEFMAALQPTVRNYV-ENRPAYP-GIAFEE----------LFPDWIFPSES 282
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
E D I + A D LL +L DP R++ EALRHP+
Sbjct: 283 E----------RDKIKT-----------SQARD---LLSKMLVIDPDKRISVDEALRHPY 318
Query: 245 FT 246
T
Sbjct: 319 IT 320
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ G LF ++++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV P+
Sbjct: 237 VIEQLGTPSPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
+
Sbjct: 320 YIN 322
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++ FG
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILGFGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++D G
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDAGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 98/242 (40%), Gaps = 61/242 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ + +F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------------RTACTNFMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
Y V TR+YRAPEVILG+G+ DIWSVGCI+ EL G +FQ ++++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNK 236
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
+ LG + + YV R +P +K L + + S
Sbjct: 237 VIEQLGTPSAEFMAALQPTVRNYV-ENRPKYPG-----------IKFEELFPDWIFPSES 284
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
E D I + A D LL +L DP R++ EALRHP+
Sbjct: 285 E----------RDKIKT-----------SQARD---LLSKMLVIDPDKRISVDEALRHPY 320
Query: 245 FT 246
T
Sbjct: 321 IT 322
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + + +K++D G
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDGGLAR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ + +K+ D + HT + + +
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY------------------ 182
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
V+TR YRAPE++L + + DIWSVGCI+ EL TG LF ++++ L
Sbjct: 183 ---------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++ R++G +LK++ ++R I+S+ ++P++
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ F + +A LL+ +L D R+TA +AL H
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
+F + H
Sbjct: 307 YFAQYH 312
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 98/247 (39%), Gaps = 77/247 (31%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP NV + + ++++DFG
Sbjct: 139 IHSAGIIHRDLKPSNVAV---------------------------NEDCELRILDFGLAR 171
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ V+TR YRAPE++L + + DIWSVGCI+ EL G+ALF + ++ L
Sbjct: 172 QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 231
Query: 124 -MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
+ME V P P+ + K HA Y I+S+ +P+
Sbjct: 232 RIMEVVGTPSPEVLAKISSEHARTY-----------------IQSLPPMPQ--------- 265
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
K FR + +A LL +L D R++A EAL H
Sbjct: 266 ----KDLSSIFRGANPLA------------------IDLLGRMLVLDSDQRVSAAEALAH 303
Query: 243 PFFTRDH 249
+F++ H
Sbjct: 304 AYFSQYH 310
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
F +L +H+ A LL +L DP R++ +AL
Sbjct: 275 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 241 RHPFFT 246
+HP+
Sbjct: 317 QHPYIN 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ G LF ++++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV P+
Sbjct: 237 VIEQLGTPSPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
+
Sbjct: 320 YIN 322
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
F +L +H+ A LL +L DP R++ +AL
Sbjct: 275 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 241 RHPFFT 246
+HP+
Sbjct: 317 QHPYIN 322
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 96/242 (39%), Gaps = 61/242 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ G LF ++++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
+ LG +K++ YV P+
Sbjct: 237 VIEQLGTPSPEFMKKLQPTVRTYVENR--------------------PK----------- 265
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
+ GY D + F + +H A LL +L D + R++ EAL+HP+
Sbjct: 266 -YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
Query: 245 FT 246
Sbjct: 321 IN 322
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
F +L +H+ A LL +L DP R++ +AL
Sbjct: 275 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 241 RHPFFT 246
+HP+
Sbjct: 317 QHPYIN 322
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
F +L +H+ A LL +L DP R++ +AL
Sbjct: 275 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 241 RHPFFT 246
+HP+
Sbjct: 317 QHPYIN 322
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS------FMMTP 177
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 178 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L
Sbjct: 230 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 267
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
F +L +H+ A LL +L DP R++ +AL
Sbjct: 268 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
Query: 241 RHPFFT 246
+HP+
Sbjct: 310 QHPYIN 315
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ G LF ++++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV P+
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
+
Sbjct: 320 YIN 322
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVG I+ E+ G LF ++++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV P+
Sbjct: 237 VIEQLGTPSPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
+
Sbjct: 320 YIN 322
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ G LF ++++
Sbjct: 186 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 237
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV P+
Sbjct: 238 VIEQLGTPCPEFM-KKLQPTVRTYVENR--------------------PK---------- 266
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 267 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320
Query: 244 FFT 246
+
Sbjct: 321 YIN 323
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVG I+ E+ G LF ++++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV P+
Sbjct: 237 VIEQLGTPSPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
+
Sbjct: 320 YIN 322
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 104/245 (42%), Gaps = 69/245 (28%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H+ ++H DLKP+N+L+ +K+ D+ + ++ I V F
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFG--------------LARAFGIPVNTFS 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
S V T YRAP+V++G ++ DIWS GCIL E+ TG+ LF + E
Sbjct: 167 SE----------VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE 216
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
L ++ ++G P L WP SV KLP+ Y
Sbjct: 217 QLKLIFDIMG-TPNESL-----------------WP----------SVTKLPK------Y 242
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
++ R + Q + +D G+L L GLL+ +P RL+A++AL
Sbjct: 243 NPNIQ-------QRPPRDLRQVLQPHTKEPLD---GNLMDFLHGLLQLNPDMRLSAKQAL 292
Query: 241 RHPFF 245
HP+F
Sbjct: 293 HHPWF 297
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 222
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 223 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L
Sbjct: 275 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 312
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
F +L +H+ A LL +L DP R++ +AL
Sbjct: 313 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354
Query: 241 RHPFFT 246
+HP+
Sbjct: 355 QHPYIN 360
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ + + F +P
Sbjct: 144 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVP-------------- 186
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
V TR+YRAPEVILG+G+ DIWSVGCI+ E+ G LF ++++
Sbjct: 187 --------FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 238
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV +
Sbjct: 239 VIEQLGTPCPEFM-KKLQPTVRTYVE--------------------------------NR 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
++ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 266 PKYAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 321
Query: 244 FFT 246
+
Sbjct: 322 YIN 324
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 222
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 223 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L
Sbjct: 275 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 312
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
F +L +H+ A LL +L DP R++ +AL
Sbjct: 313 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354
Query: 241 RHPFFT 246
+HP+
Sbjct: 355 QHPYIN 360
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 186 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L F S
Sbjct: 238 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL----FPDSL 280
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+H A LL +L DP R++ +AL+HP
Sbjct: 281 FPADS--------------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 320
Query: 244 FFT 246
+
Sbjct: 321 YIN 323
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
F +L +H+ A LL +L DP R++ +AL
Sbjct: 275 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 241 RHPFFT 246
+HP+
Sbjct: 317 QHPYIN 322
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 141 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 183
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 184 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 235
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L F S
Sbjct: 236 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL----FPDSL 278
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+H A LL +L DP R++ +AL+HP
Sbjct: 279 FPADS--------------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 318
Query: 244 FFT 246
+
Sbjct: 319 YIN 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 186 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L
Sbjct: 238 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 275
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
F +L +H+ A LL +L DP R++ +AL
Sbjct: 276 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 317
Query: 241 RHPFFT 246
+HP+
Sbjct: 318 QHPYIN 323
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
F +L +H+ A LL +L DP R++ +AL
Sbjct: 275 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 241 RHPFFT 246
+HP+
Sbjct: 317 QHPYIN 322
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ + G++
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------------------GTSF 180
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
P+ V TR+YRAPEVILG+G+ DIWSVGCI+ E+ G LF ++++
Sbjct: 181 MMTPE----VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV P+
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNALKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
+
Sbjct: 320 YIN 322
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 179 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L F S
Sbjct: 231 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL----FPDSL 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+H A LL +L DP R++ +AL+HP
Sbjct: 274 FPADS--------------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 313
Query: 244 FFT 246
+
Sbjct: 314 YIN 316
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 177
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 178 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L F S
Sbjct: 230 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL----FPDSL 272
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+H A LL +L DP R++ +AL+HP
Sbjct: 273 FPADS--------------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312
Query: 244 FFT 246
+
Sbjct: 313 YIN 315
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 179 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV + P+ A + P+L F S
Sbjct: 231 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL----FPDSL 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+H A LL +L DP R++ +AL+HP
Sbjct: 274 FPADS--------------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 313
Query: 244 FFT 246
+
Sbjct: 314 YIN 316
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 103/245 (42%), Gaps = 81/245 (33%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
H ++H DLKP+N+L+ S A+K+ DFG +
Sbjct: 136 HQHRILHRDLKPQNLLINSD---------------------------GALKLADFGLARA 168
Query: 65 YERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+ P ++Y V T YRAP+V++G ++ DIWS+GCI E+ TG+ LF + +
Sbjct: 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
Query: 122 LAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
L + +LG P P+ +WP+ V +LP + F
Sbjct: 229 LPKIFSILGTPNPR-------------------EWPQ----------VQELPLWKQRTF- 258
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
E K + + I FCQ I LL +L +DP R++AR+A+
Sbjct: 259 -QVFEKKPW------SSIIPGFCQEGI------------DLLSNMLCFDPNKRISARDAM 299
Query: 241 RHPFF 245
HP+F
Sbjct: 300 NHPYF 304
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 76/241 (31%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP+N+L+ SS IK+ D+ + Y +M +S
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLA------RIYSFQMALTS----------- 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
+V T YRAPEV+L + P D+WSVGCI E+ + LF+ +++ L
Sbjct: 179 --------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 230
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
+ V+G LP G DWP A LPR
Sbjct: 231 ILDVIG-LP-----------------GEEDWPRDVA----------LPR----------- 251
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
+ I F + +D D LL L ++P R++A AL HP+
Sbjct: 252 ----QAFHSKSAQPIEKFVTD-----IDELGKD---LLLKCLTFNPAKRISAYSALSHPY 299
Query: 245 F 245
F
Sbjct: 300 F 300
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 81/241 (33%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 68
++H DLKP+N+L+ S A+K+ DFG + + P
Sbjct: 140 ILHRDLKPQNLLINSD---------------------------GALKLADFGLARAFGIP 172
Query: 69 DQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
++Y V T YRAP+V++G ++ DIWS+GCI E+ TG+ LF + + L +
Sbjct: 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232
Query: 126 ERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
+LG P P+ +WP+ V +LP + F
Sbjct: 233 FSILGTPNPR-------------------EWPQ----------VQELPLWKQRTF--QVF 261
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
E K + + I FCQ I LL +L +DP R++AR+A+ HP+
Sbjct: 262 EKKPW------SSIIPGFCQEGI------------DLLSNMLCFDPNKRISARDAMNHPY 303
Query: 245 F 245
F
Sbjct: 304 F 304
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 76/241 (31%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP+N+L+ SS IK+ D+ + Y +M +S
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLA------RIYSFQMALTS----------- 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
+V T YRAPEV+L + P D+WSVGCI E+ + LF+ +++ L
Sbjct: 179 --------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 230
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
+ V+G LP G DWP A LPR
Sbjct: 231 ILDVIG-LP-----------------GEEDWPRDVA----------LPR----------- 251
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
+ I F + +D D LL L ++P R++A AL HP+
Sbjct: 252 ----QAFHSKSAQPIEKFVTD-----IDELGKD---LLLKCLTFNPAKRISAYSALSHPY 299
Query: 245 F 245
F
Sbjct: 300 F 300
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 31/144 (21%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 171 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 204
Query: 62 STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ +YI S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 205 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 263
Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
++ L + +VLG + ++ ++
Sbjct: 264 GVDQLVEIIKVLGTPTREQIREMN 287
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 76/241 (31%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP+N+L+ SS IK+ D+ + Y +M +S
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLA------RIYSFQMALTS----------- 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
+V T YRAPEV+L + P D+WSVGCI E+ + LF+ +++ L
Sbjct: 179 --------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 230
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
+ V+G LP G DWP A LPR
Sbjct: 231 ILDVIG-LP-----------------GEEDWPRDVA----------LPR----------- 251
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
+ I F + +D D LL L ++P R++A AL HP+
Sbjct: 252 ----QAFHSKSAQPIEKFVTD-----IDELGKD---LLLKCLTFNPAKRISAYSALSHPY 299
Query: 245 F 245
F
Sbjct: 300 F 300
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 31/144 (21%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 163 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 196
Query: 62 STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ +YI S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 197 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 255
Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
++ L + +VLG + ++ ++
Sbjct: 256 GVDQLVEIIKVLGTPTREQIREMN 279
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 31/144 (21%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 173 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 206
Query: 62 STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ +YI S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 207 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 265
Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
++ L + +VLG + ++ ++
Sbjct: 266 GVDQLVEIIKVLGTPTREQIREMN 289
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 31/144 (21%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 169 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 202
Query: 62 STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ +YI S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 203 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
++ L + +VLG + ++ ++
Sbjct: 262 GVDQLVEIIKVLGTPTREQIREMN 285
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 31/144 (21%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 214 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 247
Query: 62 STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ +YI S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 248 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 306
Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
++ L + +VLG + ++ ++
Sbjct: 307 GVDQLVEIIKVLGTPTREQIREMN 330
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 148 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 181
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ +YI S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 182 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 240
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 241 GVDQLVEIIKVLG 253
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 31/150 (20%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 140 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 173
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ +YI S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 174 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 232
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKY 147
++ L + +VLG + ++ ++ + ++
Sbjct: 233 GVDQLVEIIKVLGTPTREQIREMNPNYTEF 262
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ +YI S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 169 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ +YI S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 169 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ +YI S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 169 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 35/168 (20%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
+H L + H D+KP+N+L+ S K + +K+ DFGS
Sbjct: 155 GFIHSLGICHRDIKPQNLLVNS--------------------------KDNTLKLCDFGS 188
Query: 63 TTYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + + + +R YRAPE++LG +T D+WS+GC+ EL G+ LF ++
Sbjct: 189 AKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI 248
Query: 120 EHLAMMERVLG-PLPQHMLKRVDRHAE-KYVRRGRLDW----PEGAAS 161
+ L + +++G P + M++ + E ++ DW PEG S
Sbjct: 249 DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPS 296
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 221 LLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 252
LL+ +LRY+P R+ EA+ HPFF DHLR
Sbjct: 301 LLEQILRYEPDLRINPYEAMAHPFF--DHLRN 330
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 101/247 (40%), Gaps = 61/247 (24%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
V+H +IH DLKP N+L+ S+ +KV D+ R+ SA D
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----------LARIIDESA---ADNSEP 172
Query: 64 TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
T ++ V+TR YRAPEV+L ++ D+WS GCIL EL +F + L
Sbjct: 173 TGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
++ ++G H++ +R E +RE IKS+ P + +
Sbjct: 233 LLIFGIIG----------TPHSDNDLR-----CIESPRAREYIKSLPMYPAAPLEKMFPR 277
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
V KG LLQ +L +DP R+TA+EAL H
Sbjct: 278 -VNPKG------------------------------IDLLQRMLVFDPAKRITAKEALEH 306
Query: 243 PFFTRDH 249
P+ H
Sbjct: 307 PYLQTYH 313
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 102/249 (40%), Gaps = 74/249 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
MH +IH DLKP N+L+ + +K+ D+ + +P + YF
Sbjct: 175 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM-------------- 220
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
T Y V+TR YRAPE++L L +T D+WSVGCI E+ LF +
Sbjct: 221 -TEY--------VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH 271
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
L ++ VLG +++ V AE+ R I+S+ PR VP+
Sbjct: 272 QLQLIMMVLGTPSPAVIQAVG--AERV--------------RAYIQSLP--PRQPVPW-- 311
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
+ D A LL +LR++P+ R++A AL
Sbjct: 312 ------------------------ETVYPGADRQA---LSLLGRMLRFEPSARISAAAAL 344
Query: 241 RHPFFTRDH 249
RHPF + H
Sbjct: 345 RHPFLAKYH 353
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 140 IHSANVLHRDLKPSNLLLNTT---------------------------XDLKIXDFGLAR 172
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 233 YLDQL---NHILGIL-------------------------GSPSQEDLNXIINL------ 258
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 259 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 305
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 306 QALAHPYLEQ 315
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 88/244 (36%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH D+KPEN+L+ K S IK+ DFG
Sbjct: 124 IHRDVKPENILIT---------------------------KHSVIKLCDFGFARLLTGPS 156
Query: 71 NYI---VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 126
+Y V+TR YR+PE+++G + P D+W++GC+ EL +G L+ +++ L ++
Sbjct: 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR 216
Query: 127 RVLGPLPQHMLKRVDRHAE-----KYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
+ LG L + RH + +Y ++ PE E +K P + P
Sbjct: 217 KTLGDL-------IPRHQQVFSTNQYFSGVKIPDPEDMEPLE-----LKFPNISYPAL-- 262
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
LL+G L DPT+RLT + L
Sbjct: 263 --------------------------------------GLLKGCLHMDPTERLTCEQLLH 284
Query: 242 HPFF 245
HP+F
Sbjct: 285 HPYF 288
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 27/116 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MHD+ ++H DLKPEN+L D +L IK+IDFG
Sbjct: 122 MHDVGVVHRDLKPENLLFT--------DENDNLE----------------IKIIDFGFAR 157
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ PD + + T HY APE++ G+ CD+WS+G IL + +G+ FQ+H+
Sbjct: 158 LKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 102/249 (40%), Gaps = 74/249 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
MH +IH DLKP N+L+ + +K+ D+ + +P + YF
Sbjct: 174 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM-------------- 219
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
T Y V+TR YRAPE++L L +T D+WSVGCI E+ LF +
Sbjct: 220 -TEY--------VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH 270
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
L ++ VLG +++ V AE+ R I+S+ PR VP+
Sbjct: 271 QLQLIMMVLGTPSPAVIQAVG--AERV--------------RAYIQSLP--PRQPVPW-- 310
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
+ D A LL +LR++P+ R++A AL
Sbjct: 311 ------------------------ETVYPGADRQA---LSLLGRMLRFEPSARISAAAAL 343
Query: 241 RHPFFTRDH 249
RHPF + H
Sbjct: 344 RHPFLAKYH 352
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 101/247 (40%), Gaps = 61/247 (24%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
V+H +IH DLKP N+L+ S+ +KV D+ R+ SA D
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----------LARIIDESA---ADNSEP 172
Query: 64 TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
T ++ V+TR YRAPEV+L ++ D+WS GCIL EL +F + L
Sbjct: 173 TGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
++ ++G H++ +R E +RE IKS+ P + +
Sbjct: 233 LLIFGIIG----------TPHSDNDLR-----CIESPRAREYIKSLPMYPAAPLEKMFPR 277
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
V KG LLQ +L +DP R+TA+EAL H
Sbjct: 278 -VNPKG------------------------------IDLLQRMLVFDPAKRITAKEALEH 306
Query: 243 PFFTRDH 249
P+ H
Sbjct: 307 PYLQTYH 313
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 101/252 (40%), Gaps = 80/252 (31%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A HD ++H DLKP+N+L+ + +K+ DFG
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLI---------------------------NREGELKIADFG 145
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAP+V++G ++ DIWSVGCI E+ G LF
Sbjct: 146 LARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVS 205
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
+ L + R+LG P +WP +V +LP+
Sbjct: 206 EADQLMRIFRILGT-PNSK-----------------NWP----------NVTELPKYDPN 237
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + ++ + ++ +D S D LL +L+ DP R+TA+
Sbjct: 238 FTVYEPLPWESF------------------LKGLDESGID---LLSKMLKLDPNQRITAK 276
Query: 238 EALRHPFFTRDH 249
+AL H +F ++
Sbjct: 277 QALEHAYFKENN 288
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV L+ E+ K +++ID+G +
Sbjct: 148 HSMGIMHRDVKPHNV-LIDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66 ERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
HP+F
Sbjct: 321 HPYF 324
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 101/252 (40%), Gaps = 80/252 (31%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A HD ++H DLKP+N+L+ + +K+ DFG
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLI---------------------------NREGELKIADFG 145
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAP+V++G ++ DIWSVGCI E+ G LF
Sbjct: 146 LARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
+ L + R+LG P +WP +V +LP+
Sbjct: 206 EADQLMRIFRILGT-PNSK-----------------NWP----------NVTELPKYDPN 237
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + ++ + ++ +D S D LL +L+ DP R+TA+
Sbjct: 238 FTVYEPLPWESF------------------LKGLDESGID---LLSKMLKLDPNQRITAK 276
Query: 238 EALRHPFFTRDH 249
+AL H +F ++
Sbjct: 277 QALEHAYFKENN 288
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 140 IHSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLAR 172
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 233 YLDQL---NHILGIL-------------------------GSPSQEDLNXIINL------ 258
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 259 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 305
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 306 QALAHPYLEQ 315
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 147 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 189
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF + ++
Sbjct: 190 Y--------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 241
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV P+
Sbjct: 242 VIEQLGTPCPEFM-KKLQPTVRTYVENR--------------------PK---------- 270
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 271 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 324
Query: 244 FFT 246
+
Sbjct: 325 YIN 327
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 101/247 (40%), Gaps = 61/247 (24%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
V+H +IH DLKP N+L+ S+ +KV D+ R+ SA D
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----------LARIIDESA---ADNSEP 172
Query: 64 TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
T ++ V+TR YRAPEV+L ++ D+WS GCIL EL +F + L
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
++ ++G H++ +R E +RE IKS+ P + +
Sbjct: 233 LLIFGIIG----------TPHSDNDLR-----CIESPRAREYIKSLPMYPAAPLEKMFPR 277
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
V KG LLQ +L +DP R+TA+EAL H
Sbjct: 278 -VNPKG------------------------------IDLLQRMLVFDPAKRITAKEALEH 306
Query: 243 PFFTRDH 249
P+ H
Sbjct: 307 PYLQTYH 313
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKPEN LL+++E AIK+ DFG
Sbjct: 117 LAFCHSHRVLHRDLKPEN-LLINTE--------------------------GAIKLADFG 149
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 210 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 241
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 242 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 280
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 281 AALAHPFF 288
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ R +S F T
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF + ++
Sbjct: 179 Y--------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 230
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV P+
Sbjct: 231 VIEQLGTPCPEFM-KKLQPTVRTYVENR--------------------PK---------- 259
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 260 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 313
Query: 244 FFT 246
+
Sbjct: 314 YIN 316
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ + G++
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------------------GTSF 180
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
P+ V TR+YRAPEVILG+G+ DIWSVGCI+ E+ + LF + ++
Sbjct: 181 MMEPE----VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P M K++ YV P+
Sbjct: 237 VIEQLGTPCPAFM-KKLQPTVRNYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
+
Sbjct: 320 YIN 322
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKPEN LL+++E AIK+ DFG
Sbjct: 119 LAFCHSHRVLHRDLKPEN-LLINTE--------------------------GAIKLADFG 151
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 212 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 243
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 244 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 282
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 283 AALAHPFF 290
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 31/144 (21%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 169 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 202
Query: 62 STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ + I S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 203 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
++ L + +VLG + ++ ++
Sbjct: 262 GVDQLVEIIKVLGTPTREQIREMN 285
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 144 IHSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLAR 176
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 237 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 262
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 263 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 309
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 310 QALAHPYLEQ 319
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKPEN LL+++E AIK+ DFG
Sbjct: 118 LAFCHSHRVLHRDLKPEN-LLINTE--------------------------GAIKLADFG 150
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 211 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 242
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 243 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 281
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 282 AALAHPFF 289
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKPEN LL+++E AIK+ DFG
Sbjct: 117 LAFCHSHRVLHRDLKPEN-LLINTE--------------------------GAIKLADFG 149
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 210 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 241
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 242 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 280
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 281 AALAHPFF 288
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKPEN LL+++E AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPEN-LLINTE--------------------------GAIKLADFG 148
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 280 AALAHPFF 287
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 147 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 180
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ + I S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 181 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 240 GVDQLVEIIKVLG 252
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 109/258 (42%), Gaps = 46/258 (17%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKD-SSYFKRMPKSSAIKVIDFG 61
+H ++H DLKP N L+ +KV D+ ++ P++ +S P+ + ++ F
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231
Query: 62 STTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
T + V TR YRAPE+IL +T D+WS+GCI EL L EN+
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL-----LNMIKENVA 286
Query: 121 HLAMMERVLGPL-------PQHMLKRVDRHAEKYVRRGRLDWPE------GAASRESIKS 167
+ A GPL P ++ K+ RG D G S E I++
Sbjct: 287 YHADR----GPLFPGSSCFPLSPDQKAGNDF-KFHTRGNRDQLNVIFNILGTPSEEDIEA 341
Query: 168 VMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLR 227
L + + F + +G LA R S+ D HLL+ +L
Sbjct: 342 ---LEKEDAKRYIRIFPKREGTDLAER----------------FPASSADAIHLLKRMLV 382
Query: 228 YDPTDRLTAREALRHPFF 245
++P R+T E L HPFF
Sbjct: 383 FNPNKRITINECLAHPFF 400
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
HP+F
Sbjct: 321 HPYF 324
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 140 IHSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLAR 172
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 233 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 258
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 259 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 305
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 306 QALAHPYLEQ 315
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 147 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 180
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ + I S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 181 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 240 GVDQLVEIIKVLG 252
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 80/252 (31%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A HD ++H DLKP+N+L+ + +K+ DFG
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLI---------------------------NREGELKIADFG 145
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y + T YRAP+V++G ++ DIWSVGCI E+ G LF
Sbjct: 146 LARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
+ L + R+LG P +WP +V +LP+
Sbjct: 206 EADQLMRIFRILGT-PNSK-----------------NWP----------NVTELPKYDPN 237
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + ++ + ++ +D S D LL +L+ DP R+TA+
Sbjct: 238 FTVYEPLPWESF------------------LKGLDESGID---LLSKMLKLDPNQRITAK 276
Query: 238 EALRHPFFTRDH 249
+AL H +F ++
Sbjct: 277 QALEHAYFKENN 288
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
HP+F
Sbjct: 321 HPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
HP+F
Sbjct: 321 HPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 153 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 186
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 187 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 246
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 247 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 273
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 274 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 325
Query: 242 HPFF 245
HP+F
Sbjct: 326 HPYF 329
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 143 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 176
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ + I S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 177 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 235
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 236 GVDQLVEIIKVLG 248
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ S +K+ DFG
Sbjct: 142 IHSANVLHRDLKPSNLLLNTT---------------------------SDLKICDFGLAR 174
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E +
Sbjct: 235 YLDQL---NHILGIL-------------------------GSPSQEDLNC---------- 256
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
G ++ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 257 ---GINLKARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 307
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 308 QALAHPYLAQ 317
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 154 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 187
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ + I S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 188 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 246
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 247 GVDQLVEIIKVLG 259
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
HP+F
Sbjct: 321 HPYF 324
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 144 IHSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLAR 176
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 237 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 262
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 263 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 309
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 310 QALAHPYLEQ 319
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
HP+F
Sbjct: 321 HPYF 324
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 160 IHSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLAR 192
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 253 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 278
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 279 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 325
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 326 QALAHPYLEQ 335
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 147 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 180
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 181 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 240
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 241 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 267
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 268 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 319
Query: 242 HPFF 245
HP+F
Sbjct: 320 HPYF 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
HP+F
Sbjct: 321 HPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
HP+F
Sbjct: 321 HPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
HP+F
Sbjct: 321 HPYF 324
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
HP+F
Sbjct: 321 HPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 147 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 180
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 181 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 240
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 241 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 267
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 268 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 319
Query: 242 HPFF 245
HP+F
Sbjct: 320 HPYF 323
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 146 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 179
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 180 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 239
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 240 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 266
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 267 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 318
Query: 242 HPFF 245
HP+F
Sbjct: 319 HPYF 322
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+++ S +K+ D+ + G++
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------------------GTSF 180
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
P+ V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF + ++
Sbjct: 181 MMEPE----VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
++E++ P P+ M K++ YV P+
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
+ GY D + F + +H A LL +L D + R++ EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
+
Sbjct: 320 YIN 322
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 142 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 174
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 235 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 260
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 261 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 307
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 308 QALAHPYLAQ 317
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 139 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 172
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ + I S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 173 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 231
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 232 GVDQLVEIIKVLG 244
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ + I S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 169 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ + I S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 169 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ + I S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 169 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 136 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 169
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ + I S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 170 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 228
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 229 GVDQLVEIIKVLG 241
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H + H D+KP+N+LL P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62 ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
S P+ + I S R+YRAPE+I G +T D+WS GC+L EL G+ +F
Sbjct: 169 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
++ L + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 140 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 172
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 233 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 258
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 259 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 305
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 306 QALAHPYLEQ 315
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H D+KP NV+ + E+ K +++ID+G +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F H+N +
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG + + +D++ ++ PR
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + S Q+L+ + + L LLRYD RLTAREA+
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
HP+F
Sbjct: 321 HPYF 324
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 142 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 174
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 235 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 260
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 261 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 307
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 308 QALAHPYLEQ 317
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 160 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 192
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 253 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 278
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 279 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 325
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 326 QALAHPYLEQ 335
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 92/241 (38%), Gaps = 75/241 (31%)
Query: 12 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 71
H D+KP NVL+ ++ +K+ DFGS P +
Sbjct: 154 HRDIKPHNVLVNEAD--------------------------GTLKLCDFGSAKKLSPSEP 187
Query: 72 YI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 128
+ + +R+YRAPE+I G +T DIWSVGCI E+ GE +F+ + L + RV
Sbjct: 188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247
Query: 129 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKG 188
LG SRE ++ + P Y S KG
Sbjct: 248 LG----------------------------CPSREVLRKLN--PSHTDVDLYNS----KG 273
Query: 189 YCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
+ N+ H A + LL LL+Y P +R+ EAL HP+F
Sbjct: 274 IPWS------------NVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321
Query: 249 H 249
H
Sbjct: 322 H 322
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 144 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 176
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 177 VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 237 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 262
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 263 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 309
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 310 QALAHPYLEQ 319
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 145 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 177
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 178 VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 238 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 263
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 264 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 310
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 311 QALAHPYLEQ 320
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 138 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 170
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 231 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 256
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 257 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 303
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 304 QALAHPYLEQ 313
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 144 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 176
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 237 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 262
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 263 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 309
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 310 QALAHPYLEQ 319
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 145 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 177
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 178 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 238 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 263
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 264 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 310
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 311 QALAHPYLEQ 320
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 146 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 178
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 179 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 239 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 264
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 265 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 311
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 312 QALAHPYLEQ 321
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 137 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 169
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 170 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 230 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 255
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 256 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 302
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 303 QALAHPYLEQ 312
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 144 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 176
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 237 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 262
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 263 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 309
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 310 QALAHPYLEQ 319
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 120 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 152
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 153 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 212
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 213 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 244
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 245 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 283
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 284 AALAHPFF 291
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 280 AALAHPFF 287
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 148 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 180
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 181 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 241 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 266
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 267 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 313
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 314 QALAHPYLEQ 323
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 140 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 172
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 233 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 258
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 259 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 305
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 306 QALAHPYLEQ 315
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 117 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 149
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 150 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 210 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 241
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 242 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 280
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 281 AALAHPFF 288
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 119 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 151
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 212 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 243
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 244 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 282
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 283 AALAHPFF 290
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 118 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 150
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 211 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 242
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 243 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 281
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 282 AALAHPFF 289
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 144 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 176
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ S+E + ++ L
Sbjct: 237 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 262
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 263 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 309
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 310 QALAHPYLEQ 319
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 115 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 147
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 208 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 239
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 240 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 278
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 279 AALAHPFF 286
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 119 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 151
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 212 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 243
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 244 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 282
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 283 AALAHPFF 290
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 118 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 150
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 211 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 242
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 243 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 281
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 282 AALAHPFF 289
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 119 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 151
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 212 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 243
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 244 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 282
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 283 AALAHPFF 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 118 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 150
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 211 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 242
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 243 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 281
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 282 AALAHPFF 289
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 119 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 151
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 212 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 243
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 244 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 282
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 283 AALAHPFF 290
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 115 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 147
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 208 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 239
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 240 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 278
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 279 AALAHPFF 286
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 119 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 151
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 212 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 243
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D D LL +L YDP R++A+
Sbjct: 244 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 282
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 283 AALAHPFF 290
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 280 AALAHPFF 287
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 123 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 155
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 156 LARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 215
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 216 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 247
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 248 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 286
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 287 AALAHPFF 294
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 115 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 147
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 148 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 208 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 239
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 240 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 278
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 279 AALAHPFF 286
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 280 AALAHPFF 287
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 115 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 147
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 208 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 239
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 240 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 278
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 279 AALAHPFF 286
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 280 AALAHPFF 287
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 280 AALAHPFF 287
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 115 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 147
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 208 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 239
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 240 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 278
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 279 AALAHPFF 286
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 123 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 155
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 156 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 215
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 216 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 247
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 248 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 286
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 287 AALAHPFF 294
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 280 AALAHPFF 287
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 103/253 (40%), Gaps = 61/253 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
+H ++H DLKP N+L++ P+ +K+ D G +
Sbjct: 144 LHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADMGFAR 180
Query: 64 TYERP-----DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ P D + +V T YRAPE++LG +T DIW++GCI EL T E +F +
Sbjct: 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
E + P H ++DR DW E IK + + L
Sbjct: 241 --------EDIKTSNPYHH-DQLDRIFNVMGFPADKDW-------EDIKKMPEHSTLMKD 284
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F ++ T+C S + + V + HLLQ LL DP R+T+
Sbjct: 285 FRRNTY------------TNC--SLIKYMEKHKVKPDSKAF-HLLQKLLTMDPIKRITSE 329
Query: 238 EALRHPFFTRDHL 250
+A++ P+F D L
Sbjct: 330 QAMQDPYFLEDPL 342
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 280 AALAHPFF 287
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 117 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 149
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 210 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 241
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 242 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 280
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 281 AALAHPFF 288
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 120 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 152
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 153 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 212
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 213 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 244
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 245 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 283
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 284 AALAHPFF 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 280 AALAHPFF 287
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 115 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 147
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 148 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 208 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 239
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 240 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 278
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 279 AALAHPFF 286
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N LL+++E AIK+ DFG
Sbjct: 117 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 149
Query: 62 -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
+ + P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
++ L + R LG P ++ WP V +P +
Sbjct: 210 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 241
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
F + +F ++ +D L L +L YDP R++A+
Sbjct: 242 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 280
Query: 238 EALRHPFF 245
AL HPFF
Sbjct: 281 AALAHPFF 288
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 98/250 (39%), Gaps = 81/250 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+LL ++ +K+ DFG
Sbjct: 138 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 170
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
PD ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
L+ L +LG L G+ +E + ++ L
Sbjct: 231 YLDQL---NHILGIL-------------------------GSPEQEDLNCIINL------ 256
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
+ + Y L+ + + N + + D A D LL +L ++P R+
Sbjct: 257 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 303
Query: 238 EALRHPFFTR 247
+AL HP+ +
Sbjct: 304 QALAHPYLEQ 313
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 97/244 (39%), Gaps = 80/244 (32%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
H ++H DLKP+N LL+++E AIK+ DFG +
Sbjct: 120 HSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFGLARA 152
Query: 65 YERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+ P + Y V T YRAPE++LG + + DIWS+GCI E+ T ALF ++
Sbjct: 153 FGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + R LG P ++ WP V +P + F
Sbjct: 213 LFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPSFPKW 244
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
+ +F ++ +D L L +L YDP R++A+ AL
Sbjct: 245 ARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAKAALA 283
Query: 242 HPFF 245
HPFF
Sbjct: 284 HPFF 287
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 97/248 (39%), Gaps = 83/248 (33%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
+H ++H DLKP N+LL ++ +K+ DFG +
Sbjct: 128 LHQHWILHRDLKPNNLLL---------------------------DENGVLKLADFGLAK 160
Query: 64 TYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLE 120
++ P++ Y V TR YRAPE++ G + D+W+VGCIL EL +L+
Sbjct: 161 SFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD 220
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
L + LG + WP+ + LP Y
Sbjct: 221 QLTRIFETLGTPTEE------------------QWPD----------MCSLPD------Y 246
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAG-DLTHLLQGLLRYDPTDRLTAREA 239
+F F G L H+ +AG DL L+QGL ++P R+TA +A
Sbjct: 247 VTFKSFPGIPL-----------------HHIFSAAGDDLLDLIQGLFLFNPCARITATQA 289
Query: 240 LRHPFFTR 247
L+ +F+
Sbjct: 290 LKMKYFSN 297
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 25/130 (19%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H C++H DLKPEN+L+ S +K+ D+ + + F
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP----------------- 170
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
+V T YRAPEV+L + P D+WSVGCI E+ + LF + + L
Sbjct: 171 --------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 222
Query: 125 MERVLGPLPQ 134
+ ++G P+
Sbjct: 223 IFDLIGLPPE 232
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 32/135 (23%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
H +IH D+KPEN+L+ +S +K+ DFG + T
Sbjct: 141 HSHNIIHRDIKPENILV---------------------------SQSGVVKLCDFGFART 173
Query: 65 YERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
P + Y V+TR YRAPE+++G + + D+W++GC++ E+ GE LF +++
Sbjct: 174 LAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ 233
Query: 122 LAMMERVLGPL-PQH 135
L + LG L P+H
Sbjct: 234 LYHIMMCLGNLIPRH 248
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 25/130 (19%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H C++H DLKPEN+L+ S +K+ D+ + + SY +
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMAL--------------- 168
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
+ +V T YRAPEV+L + P D+WSVGCI E+ + LF + + L
Sbjct: 169 ------DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 222
Query: 125 MERVLGPLPQ 134
+ ++G P+
Sbjct: 223 IFDLIGLPPE 232
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 95/245 (38%), Gaps = 73/245 (29%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKP+N+L+ +K+ D+ + ++ +I
Sbjct: 113 LAYCHRQKVLHRDLKPQNLLINERGELKLADFG--------------LARAKSIP----- 153
Query: 62 STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
+ TY+ V T YR P+++LG ++ D+W VGCI E+ TG LF E
Sbjct: 154 TKTYDNE-----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
L + R+LG + WP G S E
Sbjct: 209 QLHFIFRILGTPTEET------------------WP-GILSNE----------------- 232
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
EFK Y + ++ H D LL LL+++ +R++A +A+
Sbjct: 233 ----EFKTY--------NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAM 280
Query: 241 RHPFF 245
+HPFF
Sbjct: 281 KHPFF 285
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 83/251 (33%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+L+ ++ +K+ DFG
Sbjct: 160 IHSANVLHRDLKPSNLLINTT---------------------------CDLKICDFGLAR 192
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
P+ ++ V+TR YRAPE++L G+T DIWSVGCIL E+ + +F
Sbjct: 193 IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 118 NLEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQV 176
L+ L + +LG Q L ++ A Y+ +S+ S K+
Sbjct: 253 YLDQLNHILGILGSPSQEDLNCIINMKARNYL--------------QSLPSKTKV----- 293
Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
+ F +D A LL +L ++P R+T
Sbjct: 294 -----------AWAKLFPKSDSKA------------------LDLLDRMLTFNPNKRITV 324
Query: 237 REALRHPFFTR 247
EAL HP+ +
Sbjct: 325 EEALAHPYLEQ 335
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 25/130 (19%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H C++H DLKPEN+L+ S +K+ D+ + Y +M +
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLA------RIYSYQMALAP----------- 170
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
+V T YRAPEV+L + P D+WSVGCI E+ + LF + + L
Sbjct: 171 --------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 222
Query: 125 MERVLGPLPQ 134
+ ++G P+
Sbjct: 223 IFDLIGLPPE 232
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 25/130 (19%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H C++H DLKPEN+L+ S +K+ D+ + Y +M +
Sbjct: 136 LHANCIVHRDLKPENILVTSGGTVKLADFGLA------RIYSYQMALTP----------- 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
+V T YRAPEV+L + P D+WSVGCI E+ + LF + + L
Sbjct: 179 --------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 230
Query: 125 MERVLGPLPQ 134
+ ++G P+
Sbjct: 231 IFDLIGLPPE 240
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +++ DLKPEN+LL +I++ D ++H P+ G T
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE-------------------GQTI 342
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
R V T Y APEV+ +T+ D W++GC+L E+ G++ FQ +
Sbjct: 343 KGR------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 396
Query: 125 MERVLGPLPQHMLKRVDRHA 144
+ER++ +P+ +R A
Sbjct: 397 VERLVKEVPEEYSERFSPQA 416
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H D+KP NV++ + +++ID+G +
Sbjct: 154 HSKGIMHRDVKPHNVMIDHQQ--------------------------KKLRLIDWGLAEF 187
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F +N +
Sbjct: 188 YHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQ 247
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG Y+++ +D
Sbjct: 248 LVRIAKVLGT----------EELYGYLKKYHIDLDP------------------------ 273
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + I S ++L+ + + LL LLRYD RLTA+EA+
Sbjct: 274 HFNDILGQHSRKRWENFIHSENRHLV-------SPEALDLLDKLLRYDHQQRLTAKEAME 326
Query: 242 HPFF 245
HP+F
Sbjct: 327 HPYF 330
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 71/244 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H D+KP NV++ + +++ID+G +
Sbjct: 149 HSKGIMHRDVKPHNVMIDHQQ--------------------------KKLRLIDWGLAEF 182
Query: 66 ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P Q Y V ++R+++ PE+++ + Y D+WS+GC+L + E F +N +
Sbjct: 183 YHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQ 242
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
L + +VLG Y+++ +D
Sbjct: 243 LVRIAKVLGT----------EELYGYLKKYHIDLDP------------------------ 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
F + G R + I S ++L+ + + LL LLRYD RLTA+EA+
Sbjct: 269 HFNDILGQHSRKRWENFIHSENRHLV-------SPEALDLLDKLLRYDHQQRLTAKEAME 321
Query: 242 HPFF 245
HP+F
Sbjct: 322 HPYF 325
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +++ DLKPEN+LL +I++ D ++H P+ G T
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE-------------------GQTI 342
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
R V T Y APEV+ +T+ D W++GC+L E+ G++ FQ +
Sbjct: 343 KGR------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 396
Query: 125 MERVLGPLPQHMLKRVDRHA 144
+ER++ +P+ +R A
Sbjct: 397 VERLVKEVPEEYSERFSPQA 416
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 92/244 (37%), Gaps = 74/244 (30%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
V+H+ ++H DL P N+LL + I + D+ + D+
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA-------------------- 188
Query: 64 TYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
++ + V+ R YRAPE+++ G+T D+WS GC++ E+ +ALF+ L
Sbjct: 189 -----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 123 AMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
+ V+G P + ++ A Y+R + P
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA------------------------ 279
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
+ + D +A L+ +L ++P R++ +ALR
Sbjct: 280 -----RAWTAVVPTADPVA------------------LDLIAKMLEFNPQRRISTEQALR 316
Query: 242 HPFF 245
HP+F
Sbjct: 317 HPYF 320
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 92/244 (37%), Gaps = 74/244 (30%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
V+H+ ++H DL P N+LL + I + D+ + D+
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA-------------------- 188
Query: 64 TYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
++ + V+ R YRAPE+++ G+T D+WS GC++ E+ +ALF+ L
Sbjct: 189 -----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 123 AMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
+ V+G P + ++ A Y+R + P
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA------------------------ 279
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
+ + D +A L+ +L ++P R++ +ALR
Sbjct: 280 -----RAWTAVVPTADPVA------------------LDLIAKMLEFNPQRRISTEQALR 316
Query: 242 HPFF 245
HP+F
Sbjct: 317 HPYF 320
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 24/132 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H L +I+ DLKPEN+LL +IK+ D+ S K+S ID
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKKA 183
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
Y T Y APEV+ G T D WS G ++ E+ TG FQ + E + M
Sbjct: 184 YS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
Query: 125 MERVLGPLPQHM 136
+ + +PQ +
Sbjct: 238 ILKAKLGMPQFL 249
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H D+KP NV+ + E K +++ID+G +
Sbjct: 163 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 196
Query: 66 ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P + Y V ++R+++ PE+++ L + Y D+WS+GC+ + E F H+N +
Sbjct: 197 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 256
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
L + +VLG ++ + KY R LD E R S K +K
Sbjct: 257 LVKIAKVLGT------DGLNAYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 299
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
N QH+ + + L LLRYD +RLTA EA+
Sbjct: 300 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 334
Query: 241 RHPFFTR 247
HP+F +
Sbjct: 335 THPYFQQ 341
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 24/132 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H L +I+ DLKPEN+LL +IK+ D+ S K+S ID
Sbjct: 143 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKKA 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
Y T Y APEV+ G T D WS G ++ E+ TG FQ + E + M
Sbjct: 185 YS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 238
Query: 125 MERVLGPLPQHM 136
+ + +PQ +
Sbjct: 239 ILKAKLGMPQFL 250
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 24/132 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H L +I+ DLKPEN+LL +IK+ D+ S K+S ID
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKKA 183
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
Y T Y APEV+ G T D WS G ++ E+ TG FQ + E + M
Sbjct: 184 YS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
Query: 125 MERVLGPLPQHM 136
+ + +PQ +
Sbjct: 238 ILKAKLGMPQFL 249
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 48/255 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSA----IKVI 58
+H+ +IH DLKP N LL +KV D+ ++++ KD++ + ++ K +
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 59 DFGSTTYERPDQNYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
T++ V TR YRAPE+I L +T DIWS GCI EL + Q+H
Sbjct: 205 KKQLTSH--------VVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN---MLQSHI 253
Query: 118 NLEHLAMMERV-LGPLPQHMLKRVDRHAEKYVRRGRLDWPE------GAASRESIKSVMK 170
N R L P DR+++K + D G + + +K++ K
Sbjct: 254 N----DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINK 309
Query: 171 LPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDP 230
E Y F I + Q + D +LL+ +L+++P
Sbjct: 310 -------------PEVIKYIKLFPHRKPIN------LKQKYPSISDDGINLLESMLKFNP 350
Query: 231 TDRLTAREALRHPFF 245
R+T +AL HP+
Sbjct: 351 NKRITIDQALDHPYL 365
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H D+KP NV+ + E K +++ID+G +
Sbjct: 143 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 176
Query: 66 ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P + Y V ++R+++ PE+++ L + Y D+WS+GC+ + E F H+N +
Sbjct: 177 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 236
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
L + +VLG ++ + KY R LD E R S K +K
Sbjct: 237 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 279
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
N QH+ + + L LLRYD +RLTA EA+
Sbjct: 280 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 241 RHPFFTR 247
HP+F +
Sbjct: 315 THPYFQQ 321
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H D+KP NV+ + E K +++ID+G +
Sbjct: 142 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 175
Query: 66 ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P + Y V ++R+++ PE+++ L + Y D+WS+GC+ + E F H+N +
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
L + +VLG ++ + KY R LD E R S K +K
Sbjct: 236 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 278
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
N QH+ + + L LLRYD +RLTA EA+
Sbjct: 279 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 241 RHPFFTR 247
HP+F +
Sbjct: 314 THPYFQQ 320
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H D+KP NV+ + E K +++ID+G +
Sbjct: 142 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 175
Query: 66 ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P + Y V ++R+++ PE+++ L + Y D+WS+GC+ + E F H+N +
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
L + +VLG ++ + KY R LD E R S K +K
Sbjct: 236 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 278
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
N QH+ + + L LLRYD +RLTA EA+
Sbjct: 279 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 241 RHPFFTR 247
HP+F +
Sbjct: 314 THPYFQQ 320
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H D+KP NV+ + E K +++ID+G +
Sbjct: 142 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 175
Query: 66 ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P + Y V ++R+++ PE+++ L + Y D+WS+GC+ + E F H+N +
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
L + +VLG ++ + KY R LD E R S K +K
Sbjct: 236 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 278
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
N QH+ + + L LLRYD +RLTA EA+
Sbjct: 279 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 241 RHPFFTR 247
HP+F +
Sbjct: 314 THPYFQQ 320
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H D+KP NV+ + E K +++ID+G +
Sbjct: 143 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 176
Query: 66 ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P + Y V ++R+++ PE+++ L + Y D+WS+GC+ + E F H+N +
Sbjct: 177 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 236
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
L + +VLG ++ + KY R LD E R S K +K
Sbjct: 237 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 279
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
N QH+ + + L LLRYD +RLTA EA+
Sbjct: 280 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 241 RHPFFTR 247
HP+F +
Sbjct: 315 THPYFQQ 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H D+KP NV+ + E K +++ID+G +
Sbjct: 144 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 177
Query: 66 ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P + Y V ++R+++ PE+++ L + Y D+WS+GC+ + E F H+N +
Sbjct: 178 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 237
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
L + +VLG ++ + KY R LD E R S K +K
Sbjct: 238 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 280
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
N QH+ + + L LLRYD +RLTA EA+
Sbjct: 281 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 315
Query: 241 RHPFFTR 247
HP+F +
Sbjct: 316 THPYFQQ 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H D+KP NV+ + E K +++ID+G +
Sbjct: 142 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 175
Query: 66 ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P + Y V ++R+++ PE+++ L + Y D+WS+GC+ + E F H+N +
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
L + +VLG ++ + KY R LD E R S K +K
Sbjct: 236 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 278
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
N QH+ + + L LLRYD +RLTA EA+
Sbjct: 279 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 241 RHPFFTR 247
HP+F +
Sbjct: 314 THPYFQQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H D+KP NV+ + E K +++ID+G +
Sbjct: 142 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 175
Query: 66 ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P + Y V ++R+++ PE+++ L + Y D+WS+GC+ + E F H+N +
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
L + +VLG ++ + KY R LD E R S K +K
Sbjct: 236 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 278
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
N QH+ + + L LLRYD +RLTA EA+
Sbjct: 279 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 241 RHPFFTR 247
HP+F +
Sbjct: 314 THPYFQQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H D+KP NV+ + E K +++ID+G +
Sbjct: 142 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 175
Query: 66 ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
P + Y V ++R+++ PE+++ L + Y D+WS+GC+ + E F H+N +
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
L + +VLG ++ + KY R LD E R S K +K
Sbjct: 236 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 278
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
N QH+ + + L LLRYD +RLTA EA+
Sbjct: 279 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 241 RHPFFTR 247
HP+F +
Sbjct: 314 THPYFQQ 320
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 24/132 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H L +I+ DLKPEN+LL +IK+ D+ S + ID
Sbjct: 146 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS------------------KEAIDHEKKA 187
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
Y T Y APEV+ G ++ D WS G ++ E+ TG FQ + E + +
Sbjct: 188 YS------FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL 241
Query: 125 MERVLGPLPQHM 136
+ + +PQ +
Sbjct: 242 ILKAKLGMPQFL 253
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 27/148 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH ++H DLKPEN+LL S K + I++IDFG +T
Sbjct: 166 MHKNKIVHRDLKPENLLLESK------------------------SKDANIRIIDFGLST 201
Query: 65 YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+ + + T +Y APEV+ G + CD+WS G IL L +G F + L
Sbjct: 202 HFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 260
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
+E+ K+V A+ +R+
Sbjct: 261 KKVEKGKYTFELPQWKKVSESAKDLIRK 288
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 31/150 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH ++H DLKPEN+LL S K + I++IDFG +T
Sbjct: 142 MHKNKIVHRDLKPENLLLESK------------------------SKDANIRIIDFGLST 177
Query: 65 YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+ + + T +Y APEV+ G + CD+WS G IL L +G F + L
Sbjct: 178 HFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 236
Query: 123 AMME--RVLGPLPQHMLKRVDRHAEKYVRR 150
+E + LPQ K+V A+ +R+
Sbjct: 237 KKVEKGKYTFELPQ--WKKVSESAKDLIRK 264
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 27/148 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH ++H DLKPEN+LL S K + I++IDFG +T
Sbjct: 148 MHKNKIVHRDLKPENLLLESK------------------------SKDANIRIIDFGLST 183
Query: 65 YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+ + + T +Y APEV+ G + CD+WS G IL L +G F + L
Sbjct: 184 HFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 242
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
+E+ K+V A+ +R+
Sbjct: 243 KKVEKGKYTFELPQWKKVSESAKDLIRK 270
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 27/148 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH ++H DLKPEN+LL S K + I++IDFG +T
Sbjct: 165 MHKNKIVHRDLKPENLLLESK------------------------SKDANIRIIDFGLST 200
Query: 65 YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+ + + T +Y APEV+ G + CD+WS G IL L +G F + L
Sbjct: 201 HFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 259
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
+E+ K+V A+ +R+
Sbjct: 260 KKVEKGKYTFELPQWKKVSESAKDLIRK 287
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 27/107 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH ++H DLKPEN+LL S E K IK+IDFG +T
Sbjct: 137 MHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLST 172
Query: 65 --YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ + T +Y APEV+ G + CD+WS G IL L +G
Sbjct: 173 CFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSG 218
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 27/148 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH+ ++H D+KPEN++ + K+S++K+IDFG T
Sbjct: 165 MHEHSIVHLDIKPENIMCETK-------------------------KASSVKIIDFGLAT 199
Query: 65 YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
PD+ +T + APE++ + D+W++G + L +G + F ++LE L
Sbjct: 200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL 259
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
++R + V A+ +++
Sbjct: 260 QNVKRCDWEFDEDAFSSVSPEAKDFIKN 287
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 221 LLQGLLRYDPTDRLTAREALRHPFFTRDH 249
++ LL+ +P RLT +AL HP+ DH
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPWLKGDH 312
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 75/243 (30%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLKP+N+L+ + +K+ ++ + ++ I V + +
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFG--------------LARAFGIPVRCYSAE-- 161
Query: 66 ERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA 123
V T YR P+V+ G ++ D+WS GCI EL G LF ++ + L
Sbjct: 162 --------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK 213
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
+ R+LG + WP S+ KLP
Sbjct: 214 RIFRLLGTPTEEQ------------------WP----------SMTKLP----------- 234
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
++K Y + T + ++ ++ + D LLQ LL+ +P R++A EAL+HP
Sbjct: 235 -DYKPYPMYPATTSLVN------VVPKLNATGRD---LLQNLLKCNPVQRISAEEALQHP 284
Query: 244 FFT 246
+F+
Sbjct: 285 YFS 287
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 58/134 (43%), Gaps = 29/134 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH ++H DLKPEN+LL S E K IK+IDFG +T
Sbjct: 137 MHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLST 172
Query: 65 --YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+ + T +Y APEV+ G + CD+WS G IL L +G F + L
Sbjct: 173 CFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL 231
Query: 123 AMME--RVLGPLPQ 134
+E + LPQ
Sbjct: 232 KRVETGKYAFDLPQ 245
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 58/134 (43%), Gaps = 29/134 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH ++H DLKPEN+LL S E K IK+IDFG +T
Sbjct: 137 MHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLST 172
Query: 65 --YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+ + T +Y APEV+ G + CD+WS G IL L +G F + L
Sbjct: 173 CFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL 231
Query: 123 AMME--RVLGPLPQ 134
+E + LPQ
Sbjct: 232 KRVETGKYAFDLPQ 245
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 75/243 (30%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLKP+N+L+ + +K+ D+ + ++ I V + +
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFG--------------LARAFGIPVRCYSAE-- 161
Query: 66 ERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA 123
V T YR P+V+ G ++ D+WS GCI EL LF ++ + L
Sbjct: 162 --------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLK 213
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
+ R+LG + WP S+ KLP
Sbjct: 214 RIFRLLGTPTEEQ------------------WP----------SMTKLP----------- 234
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
++K Y + T + ++ ++ + D LLQ LL+ +P R++A EAL+HP
Sbjct: 235 -DYKPYPMYPATTSLVN------VVPKLNATGRD---LLQNLLKCNPVQRISAEEALQHP 284
Query: 244 FFT 246
+F+
Sbjct: 285 YFS 287
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 30/153 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+ +H+ +IH D+K +++LL S IK+ D+ K
Sbjct: 154 LSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-------------------- 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
E P + +V T ++ APEVI L + DIWS+G +++E+ GE + N
Sbjct: 194 ----EVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYFNEPP 246
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 154
L M R+ LP + D H V RG LD
Sbjct: 247 LQAMRRIRDSLPPRV---KDLHKVSSVLRGFLD 276
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLKPEN+LL S K + I++IDFG +T+
Sbjct: 143 HKNKIVHRDLKPENLLLESK------------------------SKDANIRIIDFGLSTH 178
Query: 66 ERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
+ + T +Y APEV+ G + CD+WS G IL L +G F + L
Sbjct: 179 FEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 237
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRR 150
+E+ K+V A+ +R+
Sbjct: 238 KVEKGKYTFELPQWKKVSESAKDLIRK 264
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 92/242 (38%), Gaps = 74/242 (30%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 69
+H DLKP+N+LL S+ + P +K+ DFG + + P
Sbjct: 154 LHRDLKPQNLLLSVSDASETP----------------------VLKIGDFGLARAFGIPI 191
Query: 70 QNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 126
+ + + T YR PE++LG ++ DIWS+ CI E+ LF ++ L +
Sbjct: 192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIF 251
Query: 127 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEF 186
VLG LP WP A +P + SF +F
Sbjct: 252 EVLG-LPDDT-----------------TWPGVTA---------------LPDWKQSFPKF 278
Query: 187 KGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 246
+G L R + LL +L DP R++A+ AL HP+F+
Sbjct: 279 RGKTLK-RVLGALLDDEG--------------LDLLTAMLEMDPVKRISAKNALEHPYFS 323
Query: 247 RD 248
+
Sbjct: 324 HN 325
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 27/148 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH + ++H DLKPEN+L V+ + + IK+IDFG
Sbjct: 203 MHQMYILHLDLKPENILCVNRD-------------------------AKQIKIIDFGLAR 237
Query: 65 YERPDQNYIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+P + V+ T + APEV+ ++P D+WSVG I L +G + F + E L
Sbjct: 238 RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL 297
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
+ L + + A++++ +
Sbjct: 298 NNILACRWDLEDEEFQDISEEAKEFISK 325
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 27/125 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
+H ++H DLKPEN+LL S E K + IK++DFG S
Sbjct: 152 LHKHNIVHRDLKPENLLLESKE------------------------KDALIKIVDFGLSA 187
Query: 64 TYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+E + + T +Y APEV L + CD+WS+G IL L G F + E L
Sbjct: 188 VFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEIL 246
Query: 123 AMMER 127
+E+
Sbjct: 247 RKVEK 251
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 27/148 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH+ +H DLKPEN++ + +S+ +K+IDFG T
Sbjct: 165 MHENNYVHLDLKPENIMFTTK-------------------------RSNELKLIDFGLTA 199
Query: 65 YERPDQNYIVST--RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+ P Q+ V+T + APEV G Y D+WSVG + L +G + F + E L
Sbjct: 200 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 259
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
++ + + + ++R+
Sbjct: 260 RNVKSCDWNMDDSAFSGISEDGKDFIRK 287
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFT 246
D ++ LL DP R+T +AL HP+ T
Sbjct: 280 DGKDFIRKLLLADPNTRMTIHQALEHPWLT 309
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 27/148 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH+ +H DLKPEN++ + +S+ +K+IDFG T
Sbjct: 271 MHENNYVHLDLKPENIMFTTK-------------------------RSNELKLIDFGLTA 305
Query: 65 YERPDQNYIVST--RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+ P Q+ V+T + APEV G Y D+WSVG + L +G + F + E L
Sbjct: 306 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 365
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
++ + + + ++R+
Sbjct: 366 RNVKSCDWNMDDSAFSGISEDGKDFIRK 393
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFT 246
D ++ LL DP R+T +AL HP+ T
Sbjct: 386 DGKDFIRKLLLADPNTRMTIHQALEHPWLT 415
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YIKV D+ + KR+ G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------G 194
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YIKV D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YIKV D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YIKV D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ ++
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVKGATWT------ 218
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 219 -----------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+++ YIKV D+ + KR+ G
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------G 194
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+++ YIKV D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+++ YIKV D+ + KR+ G
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------G 194
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+++ YIKV D+ + KR+ G
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------G 194
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+++ YIKV D+ + KR+ G
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------G 194
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+++ YIKV D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 194
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 149 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 188
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 189 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 194
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ +
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVKGRTWT------ 198
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 199 -----------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 194
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 194
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 194
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+++ YIKV DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKV---------------------------TDFG 186
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 194
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 214
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 215 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 214
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 215 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 186
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 187 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 186
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 187 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 141 FEYLHSLDLIYRDLKPENLLIDEQGYIQVTDF----------GFAKRVK----------G 180
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 181 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 37/251 (14%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
+H+ +IH DLKP N LL +K+ D+ ++++ KD + + + +
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 63 TTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHEN--L 119
++ +++V TR YRAPE+IL +T DIWS GCI EL + ++H N
Sbjct: 207 KNLKKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIFAELLN---MMKSHINNPT 262
Query: 120 EHLAMME-RVLGPL-PQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMKLPRL 174
+ PL P H K+V + R +L+ G E +K + K
Sbjct: 263 NRFPLFPGSSCFPLSPDHNSKKVHEKS----NRDQLNIIFNVIGTPPEEDLKCITK---- 314
Query: 175 QVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL 234
E Y F D I + + + + LL+ +LR++ R+
Sbjct: 315 ---------QEVIKYIKLFPTRDGID------LSKKYSSISKEGIDLLESMLRFNAQKRI 359
Query: 235 TAREALRHPFF 245
T +AL HP+
Sbjct: 360 TIDKALSHPYL 370
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H DLKPEN+L +S H+P IK+IDFG
Sbjct: 137 LAYFHSQHVVHKDLKPENILF----------QDTSPHSP--------------IKIIDFG 172
Query: 62 STTYERPDQNYI--VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ D++ T Y APEV T+ CDIWS G ++ L TG
Sbjct: 173 LAELFKSDEHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ +
Sbjct: 140 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVKGRTWT------ 183
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 184 -----------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ + D+W++GCI+ +L G
Sbjct: 186 SKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+++ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+IL G+ D W++G ++ ++ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+++ YI+V DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQV---------------------------TDFG 186
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ + T Y APE+IL G+ D W++G ++ E+ G
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 151 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 188
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 189 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 183
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 184 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 183
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 184 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 183
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 184 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 27/150 (18%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A H L + H DLKPEN L ++ PD S +K+IDFG
Sbjct: 137 AYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLIDFGL 172
Query: 63 TTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
+P + V T +Y +P+V+ GL + CD WS G ++ L G F + E
Sbjct: 173 AARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXE 231
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
+ + P+ V AE +RR
Sbjct: 232 VMLKIREGTFTFPEKDWLNVSPQAESLIRR 261
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 186
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 187 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+++ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLIIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y APE+I+ G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 190
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 191 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 182
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 183 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 27/150 (18%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A H L + H DLKPEN L ++ PD S +K+IDFG
Sbjct: 120 AYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLIDFGL 155
Query: 63 TTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
+P + V T +Y +P+V+ GL + CD WS G ++ L G F + E
Sbjct: 156 AARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXE 214
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
+ + P+ V AE +RR
Sbjct: 215 VMLKIREGTFTFPEKDWLNVSPQAESLIRR 244
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 183
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 184 SKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 186
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 187 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 161
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 162 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 125 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 162
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 163 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 123 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 160
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 161 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+V+H +IH D+K +++LL +K+ D+ K
Sbjct: 260 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 299
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
E P + +V T ++ APE+I L + DIWS+G +++E+ GE + L+
Sbjct: 300 ----EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 355
Query: 122 LAMMERVLGP 131
+ M+ L P
Sbjct: 356 MKMIRDNLPP 365
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 208 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++++ + L L LL DP R TA E L+HPF +
Sbjct: 367 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 406
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 167
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 168 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55 IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
+K+ DFG T Y+ + + T +Y APEV+ G ++ D+WS+GCI+ L G+
Sbjct: 178 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 237
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
F+T E +++ +P+H+
Sbjct: 238 PFETSCLKETYLRIKKNEYSIPKHI 262
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 207 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 250
I +H++ A L +Q +L+ DPT R T E L FFT ++
Sbjct: 258 IPKHINPVAASL---IQKMLQTDPTARPTINELLNDEFFTSGYI 298
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 126 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 163
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 164 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55 IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
+K+ DFG T Y+ + + T +Y APEV+ G ++ D+WS+GCI+ L G+
Sbjct: 180 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 239
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
F+T E +++ +P+H+
Sbjct: 240 PFETSCLKETYLRIKKNEYSIPKHI 264
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 207 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 250
I +H++ A L +Q +L+ DPT R T E L FFT ++
Sbjct: 260 IPKHINPVAASL---IQKMLQTDPTARPTINELLNDEFFTSGYI 300
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+V+H +IH D+K +++LL +K+ D+ K
Sbjct: 183 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 222
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
E P + +V T ++ APE+I L + DIWS+G +++E+ GE + L+
Sbjct: 223 ----EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 278
Query: 122 LAMMERVLGP 131
+ M+ L P
Sbjct: 279 MKMIRDNLPP 288
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 218 LTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
L L LL DP R TA E L+HPF +
Sbjct: 300 LKGFLDRLLVRDPAQRATAAELLKHPFLAK 329
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55 IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
+K+ DFG T Y+ + + T +Y APEV+ G ++ D+WS+GCI+ L G+
Sbjct: 154 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 213
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
F+T E +++ +P+H+
Sbjct: 214 PFETSCLKETYLRIKKNEYSIPKHI 238
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 207 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 250
I +H++ A L +Q +L+ DPT R T E L FFT ++
Sbjct: 234 IPKHINPVAASL---IQKMLQTDPTARPTINELLNDEFFTSGYI 274
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKPEN+LL +I++ D+ ++ KV+ S
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 182
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++ N V T Y +PE++ D+W++GCI+ +L G
Sbjct: 183 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55 IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
+K+ DFG T Y+ + + T +Y APEV+ G ++ D+WS+GCI+ L G+
Sbjct: 160 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 219
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
F+T E +++ +P+H+
Sbjct: 220 PFETSCLKETYLRIKKNEYSIPKHI 244
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 207 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 250
I +H++ A L +Q +L+ DPT R T E L FFT ++
Sbjct: 240 IPKHINPVAASL---IQKMLQTDPTARPTINELLNDEFFTSGYI 280
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+V+H +IH D+K +++LL +K+ D+ K
Sbjct: 138 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 177
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
E P + +V T ++ APE+I L + DIWS+G +++E+ GE + L+
Sbjct: 178 ----EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 233
Query: 122 LAMMERVLGP 131
+ M+ L P
Sbjct: 234 MKMIRDNLPP 243
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 208 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++++ + L L LL DP R TA E L+HPF +
Sbjct: 245 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 284
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+V+H +IH D+K +++LL +K+ D+ K
Sbjct: 140 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 179
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
E P + +V T ++ APE+I L + DIWS+G +++E+ GE + L+
Sbjct: 180 ----EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 235
Query: 122 LAMMERVLGP 131
+ M+ L P
Sbjct: 236 MKMIRDNLPP 245
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 208 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++++ + L L LL DP R TA E L+HPF +
Sbjct: 247 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 286
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55 IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
+K+ DFG T Y+ + + T +Y APEV+ G ++ D+WS+GCI+ L G+
Sbjct: 156 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
F+T E +++ +P+H+
Sbjct: 216 PFETSCLKETYLRIKKNEYSIPKHI 240
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 207 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 250
I +H++ A L +Q +L+ DPT R T E L FFT ++
Sbjct: 236 IPKHINPVAASL---IQKMLQTDPTARPTINELLNDEFFTSGYI 276
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KP N+L+ ++ +KV D+ A + D G++
Sbjct: 133 HQNGIIHRDVKPANILISATNAVKVVDF------------------GIARAIADSGNSVX 174
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
+ ++ T Y +PE G D++S+GC+L E+ TGE F
Sbjct: 175 Q---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55 IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
+K+ DFG T Y+ + + T +Y APEV+ G ++ D+WS+GCI+ L G+
Sbjct: 156 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
F+T E +++ +P+H+
Sbjct: 216 PFETSCLKETYLRIKKNEYSIPKHI 240
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 207 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 250
I +H++ A L +Q +L+ DPT R T E L FFT ++
Sbjct: 236 IPKHINPVAASL---IQKMLQTDPTARPTINELLNDEFFTSGYI 276
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T Y AP +IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+V+H +IH D+K +++LL +K+ D+ K
Sbjct: 129 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 168
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
E P + +V T ++ APE+I L + DIWS+G +++E+ GE + L+
Sbjct: 169 ----EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 224
Query: 122 LAMMERVLGP 131
+ M+ L P
Sbjct: 225 MKMIRDNLPP 234
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 208 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++++ + L L LL DP R TA E L+HPF +
Sbjct: 236 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 275
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 27/107 (25%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + ++H DLKPEN+LL S K +A+K+ DFG
Sbjct: 120 HQMGVVHRDLKPENLLLASK------------------------CKGAAVKLADFGLAIE 155
Query: 66 ERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ DQ T Y +PEV+ + P DIW+ G IL L G
Sbjct: 156 VQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPF 244
+ +L+ +L +P R+TA EAL+HP+
Sbjct: 236 EAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
HD +IH D+KPENVLL S E S+ +K+ DFG
Sbjct: 147 HDNNIIHRDVKPENVLLASKE------------------------NSAPVKLGDFG-VAI 181
Query: 66 ERPDQNYI----VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ + + V T H+ APEV+ + P D+W G IL L +G
Sbjct: 182 QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 209 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
H+ SA DL ++ +L DP +R+T EAL HP+
Sbjct: 257 SHISESAKDL---VRRMLMLDPAERITVYEALNHPWL 290
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55 IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
+K+ DFG T ++ + + T +Y APEV+ G ++ DIWS+GCIL L G+
Sbjct: 181 VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
F+T E +++ +P+H+
Sbjct: 241 PFETSCLKETYIRIKKNEYSVPRHI 265
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+V+H +IH D+K +++LL +K+ D+ K
Sbjct: 133 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 172
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
E P + +V T ++ APE+I L + DIWS+G +++E+ GE + L+
Sbjct: 173 ----EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 228
Query: 122 LAMMERVLGP 131
+ M+ L P
Sbjct: 229 MKMIRDNLPP 238
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 218 LTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
L L LL DP R TA E L+HPF +
Sbjct: 250 LKGFLDRLLVRDPAQRATAAELLKHPFLAK 279
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55 IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
+K+ DFG T ++ + + T +Y APEV+ G ++ DIWS+GCIL L G+
Sbjct: 181 VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
F+T E +++ +P+H+
Sbjct: 241 PFETSCLKETYIRIKKNEYSVPRHI 265
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 26/112 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+L Y +I++ DFG
Sbjct: 132 LHAQGVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGFAK 168
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
R + +++ T ++ APEV+ G+ CDIWS+G +L + TG F
Sbjct: 169 QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---------------------- 166
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
++ + T Y PE+I G D+WS+G + E G F+ H E +
Sbjct: 167 ----RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
Query: 126 ERVLGPLP 133
RV P
Sbjct: 223 SRVEFTFP 230
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 22/128 (17%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KP N+++ ++ +KV D+ A + D G++
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDF------------------GIARAIADSGNSVT 174
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ ++ T Y +PE G D++S+GC+L E+ TGE F T ++ + +A
Sbjct: 175 Q---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPDSVAYQ 230
Query: 126 ERVLGPLP 133
P+P
Sbjct: 231 HVREDPIP 238
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55 IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
+K+ DFG T ++ + + T +Y APEV+ G ++ DIWS+GCIL L G+
Sbjct: 181 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
F+T E +++ +P+H+
Sbjct: 241 PFETSCLKETYIRIKKNEYSVPRHI 265
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KP N+++ ++ +KV D+ A + D G++
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDF------------------GIARAIADSGNSVT 174
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
+ ++ T Y +PE G D++S+GC+L E+ TGE F
Sbjct: 175 Q---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 27/108 (25%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
F +H L +I+ DLKPEN+L+ YI+V D+ + KR+ G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
T + T APE+IL G+ D W++G ++ E+ G
Sbjct: 194 RTWX-------LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KP N+++ ++ +KV D+ A + D G++
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDF------------------GIARAIADSGNSVT 174
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
+ ++ T Y +PE G D++S+GC+L E+ TGE F
Sbjct: 175 Q---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KP N+++ ++ +KV D+ A + D G++
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDF------------------GIARAIADSGNSVT 174
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
+ ++ T Y +PE G D++S+GC+L E+ TGE F
Sbjct: 175 Q---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H D+K NVL+ +K+ D+ + +
Sbjct: 141 IHRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARAFSLAKNS 181
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
N +V T YR PE++LG + P D+W GCI+ E+ T + Q + LA
Sbjct: 182 QPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
Query: 124 MMERVLGPLPQHMLKRVDRH 143
++ ++ G + + VD +
Sbjct: 241 LISQLCGSITPEVWPNVDNY 260
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55 IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
+K+ DFG T ++ + + T +Y APEV+ G ++ DIWS+GCIL L G+
Sbjct: 165 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 224
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
F+T E +++ +P+H+
Sbjct: 225 PFETSCLKETYIRIKKNEYSVPRHI 249
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KP N+++ ++ +KV D+ A + D G++
Sbjct: 150 HQNGIIHRDVKPANIMISATNAVKVMDF------------------GIARAIADSGNSVT 191
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
+ ++ T Y +PE G D++S+GC+L E+ TGE F
Sbjct: 192 Q---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 163
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
++ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 164 ----RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 126 ERVLGPLP 133
RV P
Sbjct: 220 SRVEFTFP 227
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---------------------- 166
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G F+ H E +
Sbjct: 167 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
Query: 126 ERVLGPLP 133
RV P
Sbjct: 223 SRVEFTFP 230
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P +
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 162
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
R D + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 163 RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 126 ERVLGPLP 133
RV P
Sbjct: 220 SRVEFTFP 227
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H D+K NVL+ +K+ D+ + +
Sbjct: 140 IHRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARAFSLAKNS 180
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
N +V T YR PE++LG + P D+W GCI+ E+ T + Q + LA
Sbjct: 181 QPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 239
Query: 124 MMERVLGPLPQHMLKRVDRH 143
++ ++ G + + VD +
Sbjct: 240 LISQLCGSITPEVWPNVDNY 259
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DLKP NV L + +K+ D+ + D+S+ K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--------------------- 175
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
V T +Y +PE + + + DIWS+GC+L ELC
Sbjct: 176 ---FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 166
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
R D + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 167 RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 126 ERVLGPLP 133
RV P
Sbjct: 224 SRVEFTFP 231
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 161
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
R D + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 162 RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
RV P
Sbjct: 219 SRVEFTFP 226
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H D+K NVL+ +K+ D+ + +
Sbjct: 141 IHRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARAFSLAKNS 181
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
N +V T YR PE++LG + P D+W GCI+ E+ T + Q + LA
Sbjct: 182 QPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
Query: 124 MMERVLGPLPQHMLKRVDRH 143
++ ++ G + + VD +
Sbjct: 241 LISQLCGSITPEVWPNVDNY 260
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DLKP NV L + +K+ D+ + D+S+ K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA--------------------- 175
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
V T +Y +PE + + + DIWS+GC+L ELC
Sbjct: 176 ---FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H D+K NVL+ +K+ D+ + +
Sbjct: 141 IHRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARAFSLAKNS 181
Query: 65 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
N +V T YR PE++LG + P D+W GCI+ E+ T + Q + LA
Sbjct: 182 QPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
Query: 124 MMERVLGPLPQHMLKRVDRH 143
++ ++ G + + VD +
Sbjct: 241 LISQLCGSITPEVWPNVDNY 260
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H + IH D+KP+N+LL S ++K+ D+ + + +M K ++
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------ 226
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 113
+ V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 227 -------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 167
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 168 ----RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 126 ERVLGPLP 133
RV P
Sbjct: 224 SRVEFTFP 231
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 129 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 165
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 166 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 220
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 221 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 161
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
R D + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 162 RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
RV P
Sbjct: 219 SRVEFTFP 226
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 163 ----RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
RV P
Sbjct: 219 SRVEFTFP 226
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 167
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 168 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 126 ERVLGPLP 133
RV P
Sbjct: 224 SRVEFTFP 231
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H + IH D+KP+N+LL S ++K+ D+ + + +M K ++
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------ 231
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 113
+ V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 232 -------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 129 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 165
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 166 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 220
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 221 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H + IH D+KP+N+LL S ++K+ D+ + + +M K ++
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------ 231
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 113
+ V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 232 -------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 166
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 167 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 222
Query: 126 ERVLGPLP 133
RV P
Sbjct: 223 SRVEFTFP 230
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 23/109 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
HD+ ++H D+KP+N+L+ S++ +K+ D+ K + ++S +
Sbjct: 128 HDMRIVHRDIKPQNILIDSNKTLKIFDF----------GIAKALSETSLTQT-------- 169
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
N+++ T Y +PE G DI+S+G +L E+ GE F
Sbjct: 170 -----NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 161
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 162 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 217
Query: 126 ERVLGPLP 133
RV P
Sbjct: 218 SRVEFTFP 225
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 166 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 126 ERVLGPLP 133
RV P
Sbjct: 222 SRVEFTFP 229
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 26/123 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P +
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 187
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
R D + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 188 RRDD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
Query: 126 ERV 128
RV
Sbjct: 245 SRV 247
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 26/123 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 164
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
R D + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 165 RRDD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 126 ERV 128
RV
Sbjct: 222 SRV 224
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 167
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 168 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 126 ERVLGPLP 133
RV P
Sbjct: 224 SRVEFTFP 231
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 163 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
RV P
Sbjct: 219 SRVEFTFP 226
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 166 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 126 ERVLGPLP 133
RV P
Sbjct: 222 SRVEFTFP 229
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 159
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 160 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 215
Query: 126 ERVLGPLP 133
RV P
Sbjct: 216 SRVEFTFP 223
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 164
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 165 ----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
Query: 126 ERVLGPLP 133
RV P
Sbjct: 221 SRVEFTFP 228
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 166 ----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 126 ERVLGPLP 133
RV P
Sbjct: 222 SRVEFTFP 229
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 167
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE I G D+WS+G + E G+ F+ + E +
Sbjct: 168 ----RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 126 ERVLGPLP 133
RV P
Sbjct: 224 SRVEFTFP 231
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 163 ----RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
RV P
Sbjct: 219 SRVEFTFP 226
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 163 ----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
RV P
Sbjct: 219 SRVEFTFP 226
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 31/114 (27%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 63
+HD ++H D+K +NVL+ ++Y S +K+ DFG++
Sbjct: 138 LHDNQIVHRDIKGDNVLI--------------------NTY------SGVLKISDFGTSK 171
Query: 64 --TYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALF 113
P T Y APE+I G+ DIWS+GC ++E+ TG+ F
Sbjct: 172 RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 179
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 180 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 235
Query: 126 ERVLGPLP 133
RV P
Sbjct: 236 SRVEFTFP 243
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 26/123 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 188
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 189 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
Query: 126 ERV 128
RV
Sbjct: 245 SRV 247
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 166 ----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 126 ERVLGPLP 133
RV P
Sbjct: 222 SRVEFTFP 229
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 163 ----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
RV P
Sbjct: 219 SRVEFTFP 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+L Y +I++ DFG
Sbjct: 132 LHAQGVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGFAK 168
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
R + + + T ++ APEV+ G+ CDIWS+G +L TG F
Sbjct: 169 QLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 26/129 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +++ DLK +N+LL +IK+ D+ M K + + G
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFG--------------MCKENML-----GDAK 174
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
N T Y APE++LG + + D WS G +L E+ G++ F Q E L H
Sbjct: 175 -----TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS 229
Query: 123 AMMERVLGP 131
M+ P
Sbjct: 230 IRMDNPFYP 238
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 31/114 (27%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 63
+HD ++H D+K +NVL+ ++Y S +K+ DFG++
Sbjct: 124 LHDNQIVHRDIKGDNVLI--------------------NTY------SGVLKISDFGTSK 157
Query: 64 --TYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALF 113
P T Y APE+I G+ DIWS+GC ++E+ TG+ F
Sbjct: 158 RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 26/129 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +++ DLK +N+LL +IK+ D+ M K + + G
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFG--------------MCKENML-----GDAK 175
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
N T Y APE++LG + + D WS G +L E+ G++ F Q E L H
Sbjct: 176 -----TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS 230
Query: 123 AMMERVLGP 131
M+ P
Sbjct: 231 IRMDNPFYP 239
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H L + H DLKPEN++L+ + +PK IK+IDFG
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62 STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+ +N I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 KIDFGNEFKN-IFGTPAFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H IH D+K NVLL +K+ D+ + G T
Sbjct: 132 LHSERKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLT 167
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
+ +N V T + APEVI + + DIWS+G +EL GE
Sbjct: 168 DTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ +IH DLKPENVLL S E + IK+ DFG +
Sbjct: 136 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 171
Query: 65 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
E + T Y APEV++ + G+ D WS+G IL +G F H
Sbjct: 172 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 228
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 197 DCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 252
D I S N I + + L++ LL DP R T EALRHP+ + ++R
Sbjct: 236 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 291
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S H P
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---------------------- 163
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 164 ----RTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 126 ERVLGPLP 133
RV P
Sbjct: 220 SRVEFTFP 227
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ +IH DLKPENVLL S E + IK+ DFG +
Sbjct: 130 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 165
Query: 65 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
E + T Y APEV++ + G+ D WS+G IL +G F H
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 197 DCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 252
D I S N I + + L++ LL DP R T EALRHP+ + ++R
Sbjct: 230 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ +IH DLKPENVLL S E + IK+ DFG +
Sbjct: 130 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 165
Query: 65 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
E + T Y APEV++ + G+ D WS+G IL +G F H
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 197 DCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 252
D I S N I + + L++ LL DP R T EALRHP+ + ++R
Sbjct: 230 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ +IH DLKPENVLL S E + IK+ DFG +
Sbjct: 129 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 164
Query: 65 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
E + T Y APEV++ + G+ D WS+G IL +G F H
Sbjct: 165 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 221
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 197 DCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 252
D I S N I + + L++ LL DP R T EALRHP+ + ++R
Sbjct: 229 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 284
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ +IH DLKPENVLL S E + IK+ DFG +
Sbjct: 130 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 165
Query: 65 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
E + T Y APEV++ + G+ D WS+G IL +G F H
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 197 DCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 252
D I S N I + + L++ LL DP R T EALRHP+ + ++R
Sbjct: 230 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H D+KP N+L+ S IK+ D+ S ++ID + ++
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 173
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
V TR Y APE + G ++ DIWS+G LVEL G
Sbjct: 174 ----VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 24/99 (24%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DLKP NV L + +K+ D+ + D + K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE--------------------- 175
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
V T +Y +PE + + + DIWS+GC+L ELC
Sbjct: 176 ---FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ +IH DLKPENVLL S E + IK+ DFG +
Sbjct: 255 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 290
Query: 65 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
E + T Y APEV++ + G+ D WS+G IL +G F H
Sbjct: 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 197 DCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 252
D I S N I + + L++ LL DP R T EALRHP+ + ++R
Sbjct: 355 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ +IH DLKPENVLL S E + IK+ DFG +
Sbjct: 269 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 304
Query: 65 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
E + T Y APEV++ + G+ D WS+G IL +G F H
Sbjct: 305 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 361
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 197 DCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 252
D I S N I + + L++ LL DP R T EALRHP+ + ++R
Sbjct: 369 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 424
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 27/125 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H D+KPEN+LL + K+SL IK++DFG ++
Sbjct: 162 LHKHNIVHRDIKPENILLEN---------KNSLLN---------------IKIVDFGLSS 197
Query: 65 YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+ D + T +Y APEV L + CD+WS G I+ L G F + + +
Sbjct: 198 FFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII 256
Query: 123 AMMER 127
+E+
Sbjct: 257 KKVEK 261
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 33/128 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+ + + + + +K+ DFG
Sbjct: 136 IHSANVLHRDLKPANLFINTEDLV--------------------------LKIGDFGLAR 169
Query: 65 YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
P ++ + T+ YR+P ++L +T D+W+ GCI E+ TG+ LF
Sbjct: 170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229
Query: 118 NLEHLAMM 125
LE + ++
Sbjct: 230 ELEQMQLI 237
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 222 LQGLLRYDPTDRLTAREALRHPFFT 246
L+ +L + P DRLTA EAL HP+ +
Sbjct: 286 LEQILTFSPMDRLTAEEALSHPYMS 310
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 29/126 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSE---YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+H ++H DLKPEN+LL S IK+ D+ S H + G
Sbjct: 137 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-------------------FEVG 177
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
ER + T +Y APEV L + CD+WS G IL L G F + E
Sbjct: 178 GKMKER------LGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI 230
Query: 122 LAMMER 127
L +E+
Sbjct: 231 LKRVEK 236
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTR 247
L++ +L Y+P+ R++A EAL HP+ +
Sbjct: 255 QLVKLMLTYEPSKRISAEEALNHPWIVK 282
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ D+ S+H P
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + + +
Sbjct: 163 ----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI 218
Query: 126 ERVLGPLP 133
RV P
Sbjct: 219 SRVEFTFP 226
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ ++ S+H P
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---------------------- 164
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 165 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
Query: 126 ERVLGPLP 133
RV P
Sbjct: 221 SRVEFTFP 228
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL S+ +K+ ++ S+H P
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---------------------- 165
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
+ + T Y PE+I G D+WS+G + E G+ F+ + E +
Sbjct: 166 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 126 ERVLGPLP 133
RV P
Sbjct: 222 SRVEFTFP 229
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+HDL ++H DLKPEN+L S + + S I + DFG +
Sbjct: 132 LHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSK 167
Query: 65 YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
E P + T Y APEV+ ++ D WS+G I L G
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+HDL ++H DLKPEN+L S + + S I + DFG +
Sbjct: 132 LHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSK 167
Query: 65 YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
E P + T Y APEV+ ++ D WS+G I L G
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+HDL ++H DLKPEN+L S + + S I + DFG +
Sbjct: 132 LHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSK 167
Query: 65 YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
E P + T Y APEV+ ++ D WS+G I L G
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 24/109 (22%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H +IH D+K +++LL +K+ D+ KD
Sbjct: 154 LAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV------------------ 195
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
P + +V T ++ APEVI + DIWS+G +++E+ GE
Sbjct: 196 ------PKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 218 LTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 250
L L+ +L DP +R TA+E L HPF + L
Sbjct: 271 LRDFLERMLVRDPQERATAQELLDHPFLLQTGL 303
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 29/126 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSE---YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+H ++H DLKPEN+LL S IK+ D+ S H + G
Sbjct: 120 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-------------------FEVG 160
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
ER + T +Y APEV L + CD+WS G IL L G F + E
Sbjct: 161 GKMKER------LGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI 213
Query: 122 LAMMER 127
L +E+
Sbjct: 214 LKRVEK 219
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTR 247
L++ +L Y+P+ R++A EAL HP+ +
Sbjct: 238 QLVKLMLTYEPSKRISAEEALNHPWIVK 265
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+HDL ++H DLKPEN+L S + + S I + DFG +
Sbjct: 132 LHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSK 167
Query: 65 YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
E P + T Y APEV+ ++ D WS+G I L G
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 24/106 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + IH D+K N+LL + + K+ D+ + G T
Sbjct: 141 LHFMRKIHRDIKAGNILLNTEGHAKLADFGVA------------------------GQLT 176
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
+N ++ T + APEVI +G+ DIWS+G +E+ G+
Sbjct: 177 DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 24/106 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H IH D+K NVLL +K+ D+ + G T
Sbjct: 136 LHSEKKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLT 171
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
+ +N V T + APEVI + DIWS+G +EL GE
Sbjct: 172 DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 31/135 (22%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
+++ DLK EN++L +IK+ D+ KD + K
Sbjct: 130 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--------------------- 168
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME- 126
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME
Sbjct: 169 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 225
Query: 127 ----RVLGPLPQHML 137
R LGP + +L
Sbjct: 226 IRFPRTLGPEAKSLL 240
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 27/103 (26%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DLKPEN+LL S K +A+K+ DFG + D
Sbjct: 124 IVHRDLKPENLLLASKS------------------------KGAAVKLADFGLAIEVQGD 159
Query: 70 QNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
Q T Y +PEV+ + P D+W+ G IL L G
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 221 LLQGLLRYDPTDRLTAREALRHPFF 245
L+ +L +P R+TA EAL+HP+
Sbjct: 240 LINKMLTINPAKRITASEALKHPWI 264
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+L Y +++ DFG
Sbjct: 137 LHSQGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAK 173
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
R + +++ T ++ APEV+ G+ CDIWS+G +L + G F
Sbjct: 174 QLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 211 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
V +A DL + +L DP RLTA++ L+HP+ T+
Sbjct: 255 VSETAKDL---VSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 31/135 (22%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
+++ DLK EN++L +IK+ D+ KD + K
Sbjct: 132 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--------------------- 170
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME- 126
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME
Sbjct: 171 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 227
Query: 127 ----RVLGPLPQHML 137
R LGP + +L
Sbjct: 228 IRFPRTLGPEAKSLL 242
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 31/135 (22%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
+++ DLK EN++L +IK+ D+ KD + K
Sbjct: 131 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--------------------- 169
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME- 126
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME
Sbjct: 170 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 226
Query: 127 ----RVLGPLPQHML 137
R LGP + +L
Sbjct: 227 IRFPRTLGPEAKSLL 241
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 31/117 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+H +I+ DLKPEN++L ++K+ D+ K S+H G
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD---------------------G 175
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
+ T+ T Y APE+++ G D WS+G ++ ++ TG F T EN
Sbjct: 176 TVTH------XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGEN 225
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 27/103 (26%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DLKPEN+LL S K +A+K+ DFG + D
Sbjct: 124 IVHRDLKPENLLLASKS------------------------KGAAVKLADFGLAIEVQGD 159
Query: 70 QNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
Q T Y +PEV+ + P D+W+ G IL L G
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 221 LLQGLLRYDPTDRLTAREALRHPFF 245
L+ +L +P R+TA EAL+HP+
Sbjct: 240 LINKMLTINPAKRITASEALKHPWI 264
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 27/107 (25%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
H + ++H DLKPEN+LL S K +A+K+ DFG +
Sbjct: 138 HQMGVVHRDLKPENLLLASK------------------------LKGAAVKLADFGLAIE 173
Query: 65 YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
E Q + T Y +PEV+ + P D+W+ G IL L G
Sbjct: 174 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 221 LLQGLLRYDPTDRLTAREALRHPFFT 246
L+ +L +P+ R+TA EAL+HP+ +
Sbjct: 258 LINKMLTINPSKRITAAEALKHPWIS 283
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 28/121 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H L +H D+KP+NVLL + +I++ D+ S L D + +SS
Sbjct: 191 IHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-----QSSV---------- 235
Query: 65 YERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHENL 119
V T Y +PE++ G+G P CD WS+G + E+ GE F +
Sbjct: 236 --------AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 120 E 120
E
Sbjct: 288 E 288
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H L +H D+KP+NVLL + +I++ D+ S L D + +SS
Sbjct: 207 IHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-----QSSV---------- 251
Query: 65 YERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALF 113
V T Y +PE++ G+G P CD WS+G + E+ GE F
Sbjct: 252 --------AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 31/117 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+H +I+ DLKPEN++L ++K+ D+ K S+H G
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD---------------------G 175
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
+ T+ T Y APE+++ G D WS+G ++ ++ TG F T EN
Sbjct: 176 TVTHT------FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGEN 225
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+L Y +++ DFG
Sbjct: 137 LHSQGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAK 173
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
R + +++ T ++ APEV+ G+ CDIWS+G +L + G F
Sbjct: 174 QLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
Score = 30.8 bits (68), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 221 LLQGLLRYDPTDRLTAREALRHPFFTR 247
L+ +L DP RLTA++ L+HP+ T+
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 30/112 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+H+ +I+ DLK +NVLL S +IK+ DY K L +S F P
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP----------- 185
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
NYI APE++ G + + D W++G ++ E+ G + F
Sbjct: 186 ---------NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 29/110 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +I+ DLKPEN+LL K+ IK+ DFG
Sbjct: 122 LHSKDIIYRDLKPENILL---------------------------DKNGHIKITDFGFAK 154
Query: 65 YERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
Y PD Y + T Y APEV+ + D WS G ++ E+ G F
Sbjct: 155 Y-VPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 31/135 (22%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
+++ DLK EN++L +IK+ D+ KD + K
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--------------------- 308
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME- 126
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME
Sbjct: 309 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 365
Query: 127 ----RVLGPLPQHML 137
R LGP + +L
Sbjct: 366 IRFPRTLGPEAKSLL 380
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 31/135 (22%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
+++ DLK EN++L +IK+ D+ KD + K
Sbjct: 273 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--------------------- 311
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME- 126
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME
Sbjct: 312 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 368
Query: 127 ----RVLGPLPQHML 137
R LGP + +L
Sbjct: 369 IRFPRTLGPEAKSLL 383
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 30/112 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+H+ +I+ DLK +NVLL S +IK+ DY K L +S F P
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP----------- 217
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
NYI APE++ G + + D W++G ++ E+ G + F
Sbjct: 218 ---------NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 30/112 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+H+ +I+ DLK +NVLL S +IK+ DY K L +S F P
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP----------- 170
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
NYI APE++ G + + D W++G ++ E+ G + F
Sbjct: 171 ---------NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H D+KP N+L+ S IK+ D+ S ++ID + ++
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 190
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
V TR Y +PE + G ++ DIWS+G LVE+ G
Sbjct: 191 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 30/112 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+H+ +I+ DLK +NVLL S +IK+ DY K L +S F P
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP----------- 174
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
NYI APE++ G + + D W++G ++ E+ G + F
Sbjct: 175 ---------NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H D+KP N+L+ S IK+ D+ S ++ID + ++
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 182
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
V TR Y +PE + G ++ DIWS+G LVE+ G
Sbjct: 183 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 24/108 (22%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLKPENVLL + K+ D+ S + D + + GS Y
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLR----------TSCGSPNY 176
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
P+ ++S R Y PEV DIWS G IL L G F
Sbjct: 177 AAPE---VISGRLYAGPEV----------DIWSCGVILYALLCGTLPF 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H D+KP N+L+ S IK+ D+ S ++ID + ++
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 225
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
V TR Y +PE + G ++ DIWS+G LVE+ G
Sbjct: 226 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 24/109 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH ++H D+KP NV + ++ +K+ D F S T
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF---------------------FSSKT 190
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
+ +V T +Y +PE I G+ + DIWS+GC+L E+ ++ F
Sbjct: 191 TA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 26/110 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H +LKPEN+LL S K +A+K+ DFG
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADFG 176
Query: 62 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ + T Y +PEV+ ++ P DIW+ G IL L G
Sbjct: 177 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 27/108 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKPEN+LL S K +A+K+ DFG
Sbjct: 146 IHQHDIVHRDLKPENLLLASK------------------------CKGAAVKLADFGLAI 181
Query: 65 YERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ +Q T Y +PEV+ + P DIW+ G IL L G
Sbjct: 182 EVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 24/108 (22%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLKPENVLL + K+ D+ S + D + + GS Y
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRD----------SCGSPNY 176
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
P+ ++S R Y PEV DIWS G IL L G F
Sbjct: 177 AAPE---VISGRLYAGPEV----------DIWSCGVILYALLCGTLPF 211
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H + +IH D+KP+N+LL ++K+ D+ + + +M ++ +
Sbjct: 189 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCM----------KMDETGMVHC------ 232
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 113
+ V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 233 -------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH+ +++ DLKP N+LL ++++ D + + K+ P +S
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS----------- 350
Query: 65 YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
V T Y APEV+ G+ + D +S+GC+L +L G + F+ H+
Sbjct: 351 ---------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 24/106 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H IH D+K NVLL +K+ D+ + G T
Sbjct: 135 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLT 170
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
+ +N V T + APEVI + DIWS+G +EL GE
Sbjct: 171 DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H D+KP N+L+ S IK+ D+ S ++ID + ++
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 163
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
V TR Y +PE + G ++ DIWS+G LVE+ G
Sbjct: 164 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH+ +++ DLKP N+LL ++++ D + + K+ P +S
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS----------- 349
Query: 65 YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
V T Y APEV+ G+ + D +S+GC+L +L G + F+ H+
Sbjct: 350 ---------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 33/152 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + H DLKPEN++L+ VP+ P+ IK+IDFG
Sbjct: 131 LHSKRIAHFDLKPENIMLLDK---NVPN-------PR-------------IKLIDFGIAH 167
Query: 65 YERPDQNY--IVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
+ I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 168 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGETK 223
Query: 119 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E L + V + A+ ++RR
Sbjct: 224 QETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 24/106 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H IH D+K NVLL +K+ D+ + G T
Sbjct: 120 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLT 155
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
+ +N V T + APEVI + DIWS+G +EL GE
Sbjct: 156 DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 33/152 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + H DLKPEN++L+ VP+ P+ IK+IDFG
Sbjct: 145 LHSKRIAHFDLKPENIMLLDK---NVPN-------PR-------------IKLIDFGIAH 181
Query: 65 YERPDQNY--IVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
+ I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 182 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGETK 237
Query: 119 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E L + V + A+ ++RR
Sbjct: 238 QETLTNISAVNYDFDEEYFSNTSELAKDFIRR 269
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H D+KP N+L+ S IK+ D+ S ++ID + ++
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 163
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
V TR Y +PE + G ++ DIWS+G LVE+ G
Sbjct: 164 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H D+KP N+L+ S IK+ D+ S ++ID + ++
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 163
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
V TR Y +PE + G ++ DIWS+G LVE+ G
Sbjct: 164 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H D+KP N+L+ S IK+ D+ S ++ID + ++
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 163
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
V TR Y +PE + G ++ DIWS+G LVE+ G
Sbjct: 164 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH+ +++ DLKP N+LL ++++ D + + K+ P +S
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS----------- 350
Query: 65 YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
V T Y APEV+ G+ + D +S+GC+L +L G + F+ H+
Sbjct: 351 ---------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
MH+ +++ DLKP N+LL ++++ D + + K+ P +S
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS----------- 350
Query: 65 YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
V T Y APEV+ G+ + D +S+GC+L +L G + F+ H+
Sbjct: 351 ---------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H D+KP N+L+ S IK+ D+ S ++ID + ++
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 163
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
V TR Y +PE + G ++ DIWS+G LVE+ G
Sbjct: 164 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 26/110 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H +LKPEN+LL S K +A+K+ DFG
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADFG 153
Query: 62 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ + T Y +PEV+ ++ P DIW+ G IL L G
Sbjct: 154 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 24/106 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H IH D+K NVLL +K+ D+ + G T
Sbjct: 120 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLT 155
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
+ +N V T + APEVI + DIWS+G +EL GE
Sbjct: 156 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 26/110 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H +LKPEN+LL S K +A+K+ DFG
Sbjct: 117 IAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADFG 152
Query: 62 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ + T Y +PEV+ ++ P DIW+ G IL L G
Sbjct: 153 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 26/110 (23%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A H ++H +LKPEN+LL S K +A+K+ DFG
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADFG 153
Query: 62 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ + T Y +PEV+ ++ P DIW+ G IL L G
Sbjct: 154 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 33/152 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + H DLKPEN++L+ VP+ P+ IK+IDFG
Sbjct: 124 LHSKRIAHFDLKPENIMLLDK---NVPN-------PR-------------IKLIDFGIAH 160
Query: 65 YERPDQNY--IVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
+ I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGETK 216
Query: 119 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E L + V + A+ ++RR
Sbjct: 217 QETLTNISAVNYDFDEEYFSNTSELAKDFIRR 248
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + H DLKPEN++L+ I +P IK+IDFG
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDFG-LA 166
Query: 65 YERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+E D I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 222
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V + + A+ ++R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 24/106 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H IH D+K NVLL +K+ D+ + G T
Sbjct: 140 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLT 175
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
+ +N V T + APEVI + DIWS+G +EL GE
Sbjct: 176 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 31/109 (28%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ ++H DLKPEN+L ++ E ++S I + DFG +
Sbjct: 122 LHENGIVHRDLKPENLLYLTPE------------------------ENSKIMITDFGLSK 157
Query: 65 YERPDQNYIVSTR----HYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
E QN I+ST Y APEV+ ++ D WS+G I L G
Sbjct: 158 ME---QNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + H DLKPEN++L+ I +P IK+IDFG
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDFG-LA 166
Query: 65 YERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+E D I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 222
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V + + A+ ++R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 26/100 (26%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H D+KP N+L+ S IK+ D+ S + +
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA------------------------- 163
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
N V TR Y +PE + G ++ DIWS+G LVE+ G
Sbjct: 164 -NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 22/128 (17%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 68
+IH DLK N+L++ KV + S + +K+ DFG + + R
Sbjct: 129 IIHRDLKSSNILILQ----KVENGDLS---------------NKILKITDFGLAREWHRT 169
Query: 69 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL--EHLAMME 126
+ + APEVI ++ D+WS G +L EL TGE F+ + L + M
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN 229
Query: 127 RVLGPLPQ 134
++ P+P
Sbjct: 230 KLALPIPS 237
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + H DLKPEN++L+ I +P IK+IDFG
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDFG-LA 166
Query: 65 YERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+E D I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 222
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V + + A+ ++R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 30/109 (27%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H +IH D+K +N+LL ++K+ DFG
Sbjct: 132 LHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCA 164
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
T E+ ++ +V T ++ APEV+ + DIWS+G + +E+ GE
Sbjct: 165 QITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 30/109 (27%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H +IH D+K +N+LL ++K+ DFG
Sbjct: 133 LHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCA 165
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
T E+ ++ +V T ++ APEV+ + DIWS+G + +E+ GE
Sbjct: 166 QITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 24/108 (22%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLKPENVLL + K+ D+ S + D + + GS Y
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRX----------SCGSPNY 181
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
P+ ++S R Y PEV DIWS G IL L G F
Sbjct: 182 AAPE---VISGRLYAGPEV----------DIWSSGVILYALLCGTLPF 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 30/124 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H +IH D+K +N+LL ++K+ DFG
Sbjct: 132 LHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCA 164
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
T E+ ++ +V T ++ APEV+ + DIWS+G + +E+ GE + L
Sbjct: 165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224
Query: 122 LAMM 125
L ++
Sbjct: 225 LYLI 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + H DLKPEN++L+ I +P IK+IDFG
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDFG-LA 166
Query: 65 YERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+E D I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 222
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V + A+ ++R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 21/104 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
HD +IH D+KP VLL S E +S+ K AI++ + G
Sbjct: 149 HDNNIIHRDVKPHCVLLASKE---------------NSAPVKLGGFGVAIQLGESGLVAG 193
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
R V T H+ APEV+ + P D+W G IL L +G
Sbjct: 194 GR------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 209 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
H+ SA DL ++ +L DP +R+T EAL HP+
Sbjct: 259 SHISESAKDL---VRRMLMLDPAERITVYEALNHPWL 292
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 63
+H ++H DLKP+N+LL SS++ D IK++DFG +
Sbjct: 147 LHQNNIVHLDLKPQNILL------------SSIYPLGD------------IKIVDFGMSR 182
Query: 64 -TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+ I+ T Y APE++ T D+W++G I L T + F +N E
Sbjct: 183 KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE 163
+ +V + V + A +++ + PE + E
Sbjct: 243 LNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAE 283
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 30/124 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H +IH D+K +N+LL ++K+ DFG
Sbjct: 132 LHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCA 164
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
T E+ ++ +V T ++ APEV+ + DIWS+G + +E+ GE + L
Sbjct: 165 QITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224
Query: 122 LAMM 125
L ++
Sbjct: 225 LYLI 228
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 27/107 (25%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
H + ++H +LKPEN+LL S K +A+K+ DFG +
Sbjct: 127 HQMGVVHRNLKPENLLLASK------------------------LKGAAVKLADFGLAIE 162
Query: 65 YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
E Q + T Y +PEV+ + P D+W+ G IL L G
Sbjct: 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 221 LLQGLLRYDPTDRLTAREALRHPFFT 246
L+ +L +P+ R+TA EAL+HP+ +
Sbjct: 247 LINKMLTINPSKRITAAEALKHPWIS 272
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 30/178 (16%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
M +IH DLKP N+LLV+ + +K+ DFG+
Sbjct: 121 MQPKALIHRDLKPPNLLLVAG--------------------------GTVLKICDFGTAC 154
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
+ + + APEV G ++ CD++S G IL E+ T F M
Sbjct: 155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 214
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
G P ++K + + E + R W + + R S++ ++K+ + +F G+
Sbjct: 215 WAVHNGTRPP-LIKNLPKPIESLMTRC---WSKDPSQRPSMEEIVKIMTHLMRYFPGA 268
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 31/109 (28%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H MIH D+K N+LL + +K+ DFG
Sbjct: 167 LAYLHSHNMIHRDVKAGNILL---------------------------SEPGLVKLGDFG 199
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELC 107
S + P N V T ++ APEVIL + + D+WS+G +EL
Sbjct: 200 SASIMAP-ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 21/104 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
HD +IH D+KP VLL S E +S+ K AI++ + G
Sbjct: 147 HDNNIIHRDVKPHCVLLASKE---------------NSAPVKLGGFGVAIQLGESGLVAG 191
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
R V T H+ APEV+ + P D+W G IL L +G
Sbjct: 192 GR------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 209 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
H+ SA DL ++ +L DP +R+T EAL HP+
Sbjct: 257 SHISESAKDL---VRRMLMLDPAERITVYEALNHPWL 290
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + H DLKPEN++L+ I +P IK+IDFG
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDFG-LA 166
Query: 65 YERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+E D I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 222
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V + A+ ++R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 30/178 (16%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
M +IH DLKP N+LLV+ + +K+ DFG+
Sbjct: 122 MQPKALIHRDLKPPNLLLVAG--------------------------GTVLKICDFGTAC 155
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
+ + + APEV G ++ CD++S G IL E+ T F M
Sbjct: 156 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 215
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
G P ++K + + E + R W + + R S++ ++K+ + +F G+
Sbjct: 216 WAVHNGTRPP-LIKNLPKPIESLMTRC---WSKDPSQRPSMEEIVKIMTHLMRYFPGA 269
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 54/178 (30%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H ++H+DLKP N L+V +K+IDFG
Sbjct: 170 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 201
Query: 64 TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 107
+PD + V T +Y PE I + + D+WS+GCIL +
Sbjct: 202 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261
Query: 108 TGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
G+ FQ + + ++ + ++ P +P+ L+ V + K + R+ PE
Sbjct: 262 YGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 35/153 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + H DLKPEN++L+ I +P IK+IDFG
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDFG-LA 166
Query: 65 YERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
+E D I T + APE++ LGL D+WS+G I L +G + F
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 222
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
E LA + V + A+ ++R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 29/125 (23%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF-GSTT 64
H ++H DLK EN+LL + IK+ D+ S + K+ +F GS
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF------------TFGNKLDEFCGSPP 177
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
Y P+ + + Y PEV D+WS+G IL L +G F +NL+ L
Sbjct: 178 YAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR- 222
Query: 125 MERVL 129
ERVL
Sbjct: 223 -ERVL 226
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 31/109 (28%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H MIH D+K N+LL + +K+ DFG
Sbjct: 128 LAYLHSHNMIHRDVKAGNILL---------------------------SEPGLVKLGDFG 160
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELC 107
S + P N V T ++ APEVIL + + D+WS+G +EL
Sbjct: 161 SASIMAP-ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H L +I+ D+K EN+LL S+ ++ + D+ S K + DF T
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLS----------KEFVADETERAYDFCGTI 224
Query: 65 YERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEH 121
Y AP+++ G G D WS+G ++ EL TG + F E
Sbjct: 225 -------------EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ 271
Query: 122 LAMMERVLG---PLPQHM 136
+ R+L P PQ M
Sbjct: 272 AEISRRILKSEPPYPQEM 289
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +I+ DLKPENVLL +++ D ++ K+ K + T
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLA 123
+ APE++LG + + D +++G L E+ F+ E +E+
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 124 MMERVL 129
+ +RVL
Sbjct: 401 LKQRVL 406
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 54/178 (30%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H ++H+DLKP N L+V +K+IDFG
Sbjct: 170 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 201
Query: 64 TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 107
+PD + V T +Y PE I + + D+WS+GCIL +
Sbjct: 202 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261
Query: 108 TGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
G+ FQ + + ++ + ++ P +P+ L+ V + K + R+ PE
Sbjct: 262 YGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +I+ DLKPENVLL +++ D ++ K+ K + T
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLA 123
+ APE++LG + + D +++G L E+ F+ E +E+
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 124 MMERVL 129
+ +RVL
Sbjct: 401 LKQRVL 406
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +I+ DLKPENVLL +++ D ++ K+ K + T
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLA 123
+ APE++LG + + D +++G L E+ F+ E +E+
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 124 MMERVL 129
+ +RVL
Sbjct: 401 LKQRVL 406
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 54/178 (30%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H ++H+DLKP N L+V +K+IDFG
Sbjct: 123 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 154
Query: 64 TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 107
+PD + V T +Y PE I + + D+WS+GCIL +
Sbjct: 155 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 214
Query: 108 TGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
G+ FQ + + ++ + ++ P +P+ L+ V + K + R+ PE
Sbjct: 215 YGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 270
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +I+ DLKPENVLL +++ D ++ K+ K + T
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLA 123
+ APE++LG + + D +++G L E+ F+ E +E+
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 124 MMERVL 129
+ +RVL
Sbjct: 401 LKQRVL 406
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 12 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 71
H D+KPEN+L+ + ++ + D+ + T + K+ G+T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDE-------------KLTQLGNT-------- 195
Query: 72 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP 131
V T +Y APE TY DI+++ C+L E TG +Q + A + + + P
Sbjct: 196 --VGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAI-P 252
Query: 132 LPQHMLKRVDRHAEKYVRRGRLDWPE 157
P + + + + RG PE
Sbjct: 253 RPSTVRPGIPVAFDAVIARGXAKNPE 278
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 54/177 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H+DLKP N L+V +K+IDFG
Sbjct: 143 IHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIAN 174
Query: 65 YERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELCT 108
+PD + V T +Y PE I + + D+WS+GCIL +
Sbjct: 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234
Query: 109 GEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
G+ FQ + + ++ + ++ P +P+ L+ V + K + R+ PE
Sbjct: 235 GKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 54/177 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H+DLKP N L+V +K+IDFG
Sbjct: 127 IHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIAN 158
Query: 65 YERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELCT 108
+PD + V T +Y PE I + + D+WS+GCIL +
Sbjct: 159 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 218
Query: 109 GEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
G+ FQ + + ++ + ++ P +P+ L+ V + K + R+ PE
Sbjct: 219 GKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 273
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+ + +KV D+ M + + +
Sbjct: 134 LHSKGLMHRDLKPSNIFFTMDDVVKVGDF----------GLVTAMDQDEEEQTVLTPMPA 183
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
Y R V T+ Y +PE I G +++ DI+S+G IL EL
Sbjct: 184 YAR--HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 54/177 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H+DLKP N L+V +K+IDFG
Sbjct: 143 IHQHGIVHSDLKPANFLIVDG----------------------------MLKLIDFGIAN 174
Query: 65 YERPDQNYIV-----STRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELCT 108
+PD +V T +Y PE I + + D+WS+GCIL +
Sbjct: 175 QMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234
Query: 109 GEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
G+ FQ + + ++ + ++ P +P+ L+ V + K + R+ PE
Sbjct: 235 GKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 54/177 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H+DLKP N L+V +K+IDFG
Sbjct: 123 IHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIAN 154
Query: 65 YERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELCT 108
+PD + V T +Y PE I + + D+WS+GCIL +
Sbjct: 155 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 214
Query: 109 GEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
G+ FQ + + ++ + ++ P +P+ L+ V + K + R+ PE
Sbjct: 215 GKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 269
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 27/124 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLK EN+LL + IK+ D+ S+ F K A G+ Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADXNIKIADFGF-------SNEFTFGNKLDAF----CGAPPY 178
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
P+ + + Y PEV D+WS+G IL L +G F +NL+ L
Sbjct: 179 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKEL--R 222
Query: 126 ERVL 129
ERVL
Sbjct: 223 ERVL 226
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 34/116 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+HD ++H D+K +N+ L K +++ DFG
Sbjct: 141 VHDRKILHRDIKSQNIFLT---------------------------KDGTVQLGDFGIAR 173
Query: 62 --STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 115
++T E + T +Y +PE+ + DIW++GC+L ELCT + F+
Sbjct: 174 VLNSTVELA--RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 27/124 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLK EN+LL + IK+ D+ S + ++ ++ GS Y
Sbjct: 123 HQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-------GSPPY 171
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
P+ + + Y PEV D+WS+G IL L +G F +NL+ L
Sbjct: 172 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR-- 215
Query: 126 ERVL 129
ERVL
Sbjct: 216 ERVL 219
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 27/124 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLK EN+LL + IK+ D+ S + ++ ++ GS Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-------GSPPY 178
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
P+ + + Y PEV D+WS+G IL L +G F +NL+ L
Sbjct: 179 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR-- 222
Query: 126 ERVL 129
ERVL
Sbjct: 223 ERVL 226
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 25/99 (25%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DLKPEN+LL +K+ D+ S + D ++ K GS Y P+
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSPNYAAPE 181
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 107
++S + Y PEV D+WS G IL V LC
Sbjct: 182 ---VISGKLYAGPEV----------DVWSCGVILYVMLC 207
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 27/124 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLK EN+LL + IK+ D+ S + ++ ++ GS Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-------GSPPY 178
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
P+ + + Y PEV D+WS+G IL L +G F +NL+ L
Sbjct: 179 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR-- 222
Query: 126 ERVL 129
ERVL
Sbjct: 223 ERVL 226
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 25/99 (25%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DLKPEN+LL +K+ D+ S + D ++ K GS Y P+
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSPNYAAPE 182
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 107
++S + Y PEV D+WS G IL V LC
Sbjct: 183 ---VISGKLYAGPEV----------DVWSCGVILYVMLC 208
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 27/124 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLK EN+LL + IK+ D+ S + ++ ++ GS Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-------GSPPY 178
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
P+ + + Y PEV D+WS+G IL L +G F +NL+ L
Sbjct: 179 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR-- 222
Query: 126 ERVL 129
ERVL
Sbjct: 223 ERVL 226
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 35/155 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H L +H D+KP+N+L+ + +I++ D+ S L +D + +SS
Sbjct: 191 VHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-----QSSV---------- 235
Query: 65 YERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHENL 119
V T Y +PE++ G G P CD WS+G + E+ GE F +
Sbjct: 236 --------AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 120 EHLAMM----ERVLGPLPQHMLKRVDRHAEKYVRR 150
E + ER P + V +A+ +RR
Sbjct: 288 ETYGKIMNHKERFQFPT---QVTDVSENAKDLIRR 319
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 25/99 (25%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DLKPEN+LL +K+ D+ S + D ++ K GS Y P+
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSPNYAAPE 176
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 107
++S + Y PEV D+WS G IL V LC
Sbjct: 177 ---VISGKLYAGPEV----------DVWSCGVILYVMLC 202
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 53 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
++K+ DFG T E+ ++ +V T ++ APEV+ + DIWS+G + +E+ G
Sbjct: 154 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
Query: 110 E 110
E
Sbjct: 214 E 214
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 25/99 (25%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DLKPEN+LL +K+ D+ S + D ++ K GS Y P+
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSPNYAAPE 172
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 107
++S + Y PEV D+WS G IL V LC
Sbjct: 173 ---VISGKLYAGPEV----------DVWSCGVILYVMLC 198
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 24/104 (23%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DLKPEN+LL + +K+ D+ S + D ++ K GS Y P+
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLK----------TSCGSPNYAAPE 177
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
+++ + Y PEV D+WS G +L + G F
Sbjct: 178 ---VINGKLYAGPEV----------DVWSCGIVLYVMLVGRLPF 208
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 27/124 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLK EN+LL + IK+ D+ S+ F K A G+ Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTFGNKLDAF----CGAPPY 178
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
P+ + + Y PEV D+WS+G IL L +G F +NL+ L
Sbjct: 179 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR-- 222
Query: 126 ERVL 129
ERVL
Sbjct: 223 ERVL 226
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 17/102 (16%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
+IH DLK EN+LL + IK+ D+ S+ Y + + ++ E
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE---------EEIT 209
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPC----DIWSVGCILVELC 107
+N +T YR PE+I L +P DIW++GCIL LC
Sbjct: 210 RN---TTPMYRTPEII-DLYSNFPIGEKQDIWALGCILYLLC 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +++ D+K EN++L +IK+ D+ D + K
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX---------------- 164
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
T Y APEV+ + D W +G ++ E+ G F Q HE L L
Sbjct: 165 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Query: 123 AMMERVLGP 131
+ME + P
Sbjct: 217 ILMEEIRFP 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + H D+KPEN+L S E K + +K+ DFG
Sbjct: 125 LHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFA- 159
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ QN + + T +Y APEV+ + CD+WS+G I+ L G
Sbjct: 160 -KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
D L++ LL+ DPT+RLT + + HP+ +
Sbjct: 244 DAKQLIRLLLKTDPTERLTITQFMNHPWINQ 274
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + H D+KPEN+L S E K + +K+ DFG
Sbjct: 144 LHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFA- 178
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ QN + + T +Y APEV+ + CD+WS+G I+ L G
Sbjct: 179 -KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
D L++ LL+ DPT+RLT + + HP+ +
Sbjct: 263 DAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +++ D+K EN++L +IK+ D+ D + K
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX---------------- 169
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
T Y APEV+ + D W +G ++ E+ G F Q HE L L
Sbjct: 170 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 221
Query: 123 AMMERVLGP 131
+ME + P
Sbjct: 222 ILMEEIRFP 230
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +++ D+K EN++L +IK+ D+ D + K
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX---------------- 164
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
T Y APEV+ + D W +G ++ E+ G F Q HE L L
Sbjct: 165 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Query: 123 AMMERVLGP 131
+ME + P
Sbjct: 217 ILMEEIRFP 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 31/131 (23%)
Query: 1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
+ +H L ++H DLKPEN+LL IK+ D+ S +D
Sbjct: 123 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ-------------------LDP 163
Query: 61 GSTTYERPDQNYIVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEALFQ 114
G E + T Y APE+I G+ D+WS G I+ L G F
Sbjct: 164 GEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 217
Query: 115 THENLEHLAMM 125
+ + L M+
Sbjct: 218 HRKQMLMLRMI 228
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 212 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
D + + L+ L P R TA EAL HPFF +
Sbjct: 241 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +++ D+K EN++L +IK+ D+ D + K
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---------------- 164
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
T Y APEV+ + D W +G ++ E+ G F Q HE L L
Sbjct: 165 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Query: 123 AMMERVLGP 131
+ME + P
Sbjct: 217 ILMEEIRFP 225
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +++ D+K EN++L +IK+ D+ D + K
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX---------------- 164
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
T Y APEV+ + D W +G ++ E+ G F Q HE L L
Sbjct: 165 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Query: 123 AMMERVLGP 131
+ME + P
Sbjct: 217 ILMEEIRFP 225
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +++ D+K EN++L +IK+ D+ D + K
Sbjct: 124 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---------------- 167
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
T Y APEV+ + D W +G ++ E+ G F Q HE L L
Sbjct: 168 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 219
Query: 123 AMMERVLGP 131
+ME + P
Sbjct: 220 ILMEEIRFP 228
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ +IH DLKPEN++L P + +H D Y K + D G
Sbjct: 138 LHENRIIHRDLKPENIVLQ-------PGPQRLIHKIIDLGYAKEL---------DQGELC 181
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
E V T Y APE++ +T D WS G + E TG
Sbjct: 182 TE------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 27/124 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H ++H DLK EN+LL + IK+ D+ S+ F K A G+ Y
Sbjct: 131 HQKRIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTVGGKLDAF----CGAPPY 179
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
P+ + + Y PEV D+WS+G IL L +G F +NL+ L
Sbjct: 180 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR-- 223
Query: 126 ERVL 129
ERVL
Sbjct: 224 ERVL 227
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 31/131 (23%)
Query: 1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
+ +H L ++H DLKPEN+LL IK+ D+ S +D
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ-------------------LDP 176
Query: 61 GSTTYERPDQNYIVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEALFQ 114
G E + T Y APE+I G+ D+WS G I+ L G F
Sbjct: 177 GEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230
Query: 115 THENLEHLAMM 125
+ + L M+
Sbjct: 231 HRKQMLMLRMI 241
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 212 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
D + + L+ L P R TA EAL HPFF +
Sbjct: 254 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 22/105 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ +IH DLKPEN++L P + +H D Y K + D G
Sbjct: 137 LHENRIIHRDLKPENIVLQ-------PGPQRLIHKIIDLGYAKEL---------DQGELC 180
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
E V T Y APE++ +T D WS G + E TG
Sbjct: 181 TE------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 54/178 (30%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H ++H+DLKP N L+V +K+IDFG
Sbjct: 170 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 201
Query: 64 TYERPDQNYIVSTR-----HYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 107
+PD +V +Y PE I + + D+WS+GCIL +
Sbjct: 202 NQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261
Query: 108 TGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
G+ FQ + + ++ + ++ P +P+ L+ V + K + R+ PE
Sbjct: 262 YGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 29/125 (23%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF-GSTT 64
H ++H DLK EN+LL IK+ D+ S + K+ F GS
Sbjct: 131 HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF------------TVGNKLDTFCGSPP 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
Y P+ + + Y PEV D+WS+G IL L +G F +NL+ L
Sbjct: 179 YAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR- 223
Query: 125 MERVL 129
ERVL
Sbjct: 224 -ERVL 227
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +++ D+K EN++L +IK+ D+ D + K
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---------------- 164
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
T Y APEV+ + D W +G ++ E+ G F Q HE L L
Sbjct: 165 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Query: 123 AMMERVLGP 131
+ME + P
Sbjct: 217 ILMEEIRFP 225
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+L S K P+ + +K+ DFG
Sbjct: 138 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 173
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
E N + + T +Y APEV+ + CD+WS+G I+ L G F ++ L
Sbjct: 174 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 230
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++ L++ LL+ +PT R+T E + HP+ +
Sbjct: 258 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 288
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 34/130 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ + +H DL NVLLV+ Y K+ DFG +
Sbjct: 485 LEESNFVHRDLAARNVLLVTQHYAKIS---------------------------DFGLSK 517
Query: 65 YERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE 117
R D+NY + H + APE I ++ D+WS G ++ E + G+ ++ +
Sbjct: 518 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 577
Query: 118 NLEHLAMMER 127
E AM+E+
Sbjct: 578 GSEVTAMLEK 587
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+L S K P+ + +K+ DFG
Sbjct: 147 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 182
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
E N + + T +Y APEV+ + CD+WS+G I+ L G F ++ L
Sbjct: 183 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 239
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++ L++ LL+ +PT R+T E + HP+ +
Sbjct: 267 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 297
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+L S K P+ + +K+ DFG
Sbjct: 177 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 212
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
E N + + T +Y APEV+ + CD+WS+G I+ L G F ++ L
Sbjct: 213 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 269
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++ L++ LL+ +PT R+T E + HP+ +
Sbjct: 297 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 29/125 (23%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF-GSTT 64
H ++H DLK EN+LL + IK+ D+ S + K+ F GS
Sbjct: 128 HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF------------TVGGKLDTFCGSPP 175
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
Y P+ + + Y PEV D+WS+G IL L +G F +NL+ L
Sbjct: 176 YAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR- 220
Query: 125 MERVL 129
ERVL
Sbjct: 221 -ERVL 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+L S K P+ + +K+ DFG
Sbjct: 137 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 172
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
E N + + T +Y APEV+ + CD+WS+G I+ L G F ++ L
Sbjct: 173 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 229
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++ L++ LL+ +PT R+T E + HP+ +
Sbjct: 257 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 287
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+L S K P+ + +K+ DFG
Sbjct: 139 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 174
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
E N + + T +Y APEV+ + CD+WS+G I+ L G F ++ L
Sbjct: 175 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 231
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++ L++ LL+ +PT R+T E + HP+ +
Sbjct: 259 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 289
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 34/130 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ + +H DL NVLLV+ Y K+ DFG +
Sbjct: 486 LEESNFVHRDLAARNVLLVTQHYAKIS---------------------------DFGLSK 518
Query: 65 YERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE 117
R D+NY + H + APE I ++ D+WS G ++ E + G+ ++ +
Sbjct: 519 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 578
Query: 118 NLEHLAMMER 127
E AM+E+
Sbjct: 579 GSEVTAMLEK 588
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+L S K P+ + +K+ DFG
Sbjct: 133 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 168
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
E N + + T +Y APEV+ + CD+WS+G I+ L G F ++ L
Sbjct: 169 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 225
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFF 245
++ L++ LL+ +PT R+T E + HP+
Sbjct: 253 EVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+L S K P+ + +K+ DFG
Sbjct: 183 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 218
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
E N + + T +Y APEV+ + CD+WS+G I+ L G F ++ L
Sbjct: 219 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 275
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++ L++ LL+ +PT R+T E + HP+ +
Sbjct: 303 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 333
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL NVLLV+ Y K+ DFG + R D+
Sbjct: 129 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 161
Query: 71 NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
NY + H + APE I ++ D+WS G ++ E G+ ++ + E A
Sbjct: 162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 221
Query: 124 MMER 127
M+E+
Sbjct: 222 MLEK 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 22/107 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H DLKP N+ + +KV D+ L T D D T
Sbjct: 180 LHSKGLMHRDLKPSNIFFTMDDVVKVGDF--GLVTAMDQ---------------DEEEQT 222
Query: 65 YERPDQNYI-----VSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
P Y V T+ Y +PE I G +++ DI+S+G IL EL
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+L S K P+ + +K+ DFG
Sbjct: 132 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 167
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
E N + + T +Y APEV+ + CD+WS+G I+ L G F ++ L
Sbjct: 168 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 224
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++ L++ LL+ +PT R+T E + HP+ +
Sbjct: 252 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 282
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL NVLLV+ Y K+ DFG + R D+
Sbjct: 127 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 159
Query: 71 NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
NY + H + APE I ++ D+WS G ++ E G+ ++ + E A
Sbjct: 160 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 219
Query: 124 MMER 127
M+E+
Sbjct: 220 MLEK 223
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+L S K P+ + +K+ DFG
Sbjct: 133 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 168
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
E N + + T +Y APEV+ + CD+WS+G I+ L G F ++ L
Sbjct: 169 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 225
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++ L++ LL+ +PT R+T E + HP+ +
Sbjct: 253 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 283
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL NVLLV+ Y K+ DFG + R D+
Sbjct: 133 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 165
Query: 71 NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
NY + H + APE I ++ D+WS G ++ E G+ ++ + E A
Sbjct: 166 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
Query: 124 MMER 127
M+E+
Sbjct: 226 MLEK 229
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL NVLLV+ Y K+ DFG + R D+
Sbjct: 147 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 179
Query: 71 NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
NY + H + APE I ++ D+WS G ++ E G+ ++ + E A
Sbjct: 180 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 239
Query: 124 MMER 127
M+E+
Sbjct: 240 MLEK 243
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+L S K P+ + +K+ DFG
Sbjct: 131 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 166
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
E N + + T +Y APEV+ + CD+WS+G I+ L G F ++ L
Sbjct: 167 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 223
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++ L++ LL+ +PT R+T E + HP+ +
Sbjct: 251 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 281
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL NVLLV+ Y K+ DFG + R D+
Sbjct: 139 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 171
Query: 71 NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
NY + H + APE I ++ D+WS G ++ E G+ ++ + E A
Sbjct: 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 231
Query: 124 MMER 127
M+E+
Sbjct: 232 MLEK 235
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL NVLLV+ Y K+ DFG + R D+
Sbjct: 149 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 181
Query: 71 NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
NY + H + APE I ++ D+WS G ++ E G+ ++ + E A
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
Query: 124 MMER 127
M+E+
Sbjct: 242 MLEK 245
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL NVLLV+ Y K+ DFG + R D+
Sbjct: 149 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 181
Query: 71 NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
NY + H + APE I ++ D+WS G ++ E G+ ++ + E A
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
Query: 124 MMER 127
M+E+
Sbjct: 242 MLEK 245
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 28/103 (27%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
+IH D+KP+N+LL ++ + D+ + P+++ TT
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI-----------------TT----- 173
Query: 70 QNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILVELCTG 109
+ T+ Y APE+ G G+++ D WS+G EL G
Sbjct: 174 ---MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D +FK + P S I
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI-------------- 181
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 182 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 35/133 (26%)
Query: 1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
+ +H L ++H DLKPEN+LL IK+ DF
Sbjct: 136 VICALHKLNIVHRDLKPENILL---------------------------DDDMNIKLTDF 168
Query: 61 GSTTYERPDQNY--IVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEAL 112
G + P + + T Y APE+I G+ D+WS G I+ L G
Sbjct: 169 GFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
Query: 113 FQTHENLEHLAMM 125
F + + L M+
Sbjct: 229 FWHRKQMLMLRMI 241
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 212 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
D + + L+ L P R TA EAL HPFF +
Sbjct: 254 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 20/108 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H IH D+K N+LL +++ D+ S + G T
Sbjct: 137 LHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF------------------LATGGDIT 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEA 111
+ + + V T + APEV+ + G+ + DIWS G +EL TG A
Sbjct: 179 RNKVRKTF-VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 225
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+L S K P+ + +K+ DFG
Sbjct: 131 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 166
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
E N + T +Y APEV+ + CD+WS+G I+ L G F ++ L
Sbjct: 167 -ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 223
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++ L++ LL+ +PT R+T E + HP+ +
Sbjct: 251 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 281
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 20/108 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H IH D+K N+LL +++ D+ S + G T
Sbjct: 132 LHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF------------------LATGGDIT 173
Query: 65 YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEA 111
+ + + V T + APEV+ + G+ + DIWS G +EL TG A
Sbjct: 174 RNKVRKTF-VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 34/113 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H D+K +NVLL S D S+ + DFG
Sbjct: 201 LHSRRILHGDVKADNVLLSS-----------------DGSH---------AALCDFGHAV 234
Query: 65 YERPDQ--------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+PD +YI T + APEV+LG D+WS C+++ + G
Sbjct: 235 CLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 34/113 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H D+K +NVLL S S + DFG
Sbjct: 182 LHSRRILHGDVKADNVLLSSD--------------------------GSHAALCDFGHAV 215
Query: 65 YERPDQ--------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+PD +YI T + APEV+LG D+WS C+++ + G
Sbjct: 216 CLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 24/116 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H L +++ DLKPEN+LL S +I + D+ + I+ STT
Sbjct: 155 LHSLNIVYRDLKPENILLDSQGHIVLTDF------------------GLCKENIEHNSTT 196
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
+ T Y APEV+ + D W +G +L E+ G F + E
Sbjct: 197 ------STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 26/109 (23%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 61
A +H+ ++H DLKPEN+L + PD + +K+ DFG
Sbjct: 162 AYLHENGIVHRDLKPENLLYATP----APD--------------------APLKIADFGL 197
Query: 62 -STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ + T Y APE++ G + D+WSVG I L G
Sbjct: 198 SKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 212 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 246
D + + L++ L+ DP RLT +AL+HP+ T
Sbjct: 276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT 310
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 27/148 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + H D++PEN++ Y++ +SS IK+I+FG
Sbjct: 118 LHSHNIGHFDIRPENII-----------YQTR--------------RSSTIKIIEFGQAR 152
Query: 65 YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
+P N+ + + Y APEV + D+WS+G ++ L +G F N + +
Sbjct: 153 QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII 212
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
+ + K + A +V R
Sbjct: 213 ENIMNAEYTFDEEAFKEISIEAMDFVDR 240
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 21/104 (20%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
+L +IH D+KP N+LL S IK+ D+ S S K D G Y
Sbjct: 143 ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL-----------VDSIAKTRDAGCRPY 191
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
P++ ++R G+ D+WS+G L EL TG
Sbjct: 192 MAPERIDPSASRQ----------GYDVRSDVWSLGITLYELATG 225
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H+ +IH D+KPEN+L+ +K+ D+ S+H P S +R
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRX---------------- 171
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
+ T Y PE+I G D+W G + E G F + + E
Sbjct: 172 -------MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL K+ D+ + H DS+Y + +K
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVK-------------- 235
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T+ D+WS G L EL
Sbjct: 236 --------WMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+ +H +IH DLKP N+ + S +K+ D+ + K + +S I +D
Sbjct: 129 LSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKLDSQ 178
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELC 107
+ + + T Y A EV+ G G + D++S+G I E+
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H+ +IH D+KPEN+L+ +K+ D+ S+H P S +R
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRX---------------- 172
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
+ T Y PE+I G D+W G + E G F + + E
Sbjct: 173 -------MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+ +H +IH DLKP N+ + S +K+ D+ + K + +S I +D
Sbjct: 129 LSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKLDSQ 178
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELC 107
+ + + T Y A EV+ G G + D++S+G I E+
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 29/111 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+HD +IH DLK N+L IK+ D+ S + T
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR----------------------T 188
Query: 65 YERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 110
+R D + T ++ APEV++ + Y D+WS+G L+E+ E
Sbjct: 189 IQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H+ +IH D+KPEN+L+ +K+ D+ S+H P S +R
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRX---------------- 171
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
+ T Y PE+I G D+W G + E G F + + E
Sbjct: 172 -------MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 28/118 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+L S K P+ + +K+ DFG
Sbjct: 177 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 212
Query: 65 YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
E N + + T +Y APEV+ + CD WS+G I L G F ++ L
Sbjct: 213 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL 269
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH +L N+L+ + +K+ D+ + P+D Y+K + P S I
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI-------------- 182
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 183 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 24/111 (21%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
+I+ DLK +NV+L S +IK+ D+ D G TT
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD------------------GVTT----- 178
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
T Y APE+I + D W+ G +L E+ G+A F+ + E
Sbjct: 179 -KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 29/111 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+HD +IH DLK N+L IK+ D+ S K++ +R
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQR---------------- 191
Query: 65 YERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 110
++ + T ++ APEV++ + Y D+WS+G L+E+ E
Sbjct: 192 -----RDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 28/111 (25%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+HD +IH DLK N+L IK+ D+ S + T
Sbjct: 124 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR---------------------TX 162
Query: 65 YERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 110
+R D + T ++ APEV++ + Y D+WS+G L+E+ E
Sbjct: 163 IQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 211
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 29/111 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+HD +IH DLK N+L IK+ D+ S K++ +R
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQR---------------- 191
Query: 65 YERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 110
++ + T ++ APEV++ + Y D+WS+G L+E+ E
Sbjct: 192 -----RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 26/132 (19%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
+I+ DLK +NV+L S +IK+ D+ D G TT
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD------------------GVTT----- 499
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-AMMERV 128
T Y APE+I + D W+ G +L E+ G+A F+ + E ++ME
Sbjct: 500 -KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN 558
Query: 129 LGPLPQHMLKRV 140
+ P+ M K
Sbjct: 559 VA-YPKSMSKEA 569
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 26/107 (24%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + ++H DLKPEN+L S + + S I + DFG +
Sbjct: 136 LHRMGIVHRDLKPENLLYYSQD------------------------EESKIMISDFGLSK 171
Query: 65 YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
E + T Y APEV+ ++ D WS+G I L G
Sbjct: 172 MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 29/104 (27%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLKP N+ LV ++ +K+ DFG T
Sbjct: 152 IHSKKLIHRDLKPSNIFLVDTKQVKIG---------------------------DFGLVT 184
Query: 65 YERPDQNYIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ D S T Y +PE I + D++++G IL EL
Sbjct: 185 SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 24/116 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +I+ DLK +NV+L S +IK+ D+ D G TT
Sbjct: 136 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD------------------GVTT 177
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
E T Y APE+I + D W+ G +L E+ G+ F + E
Sbjct: 178 RE------FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 31/117 (26%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ +H ++H DLKPEN+LL + I++ D+ S H ++ G
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCH-------------------LEPGE 254
Query: 63 TTYERPDQNYIVSTRHYRAPEVI-LGLGWTYP-----CDIWSVGCILVELCTGEALF 113
E + T Y APE++ + T+P D+W+ G IL L G F
Sbjct: 255 KLRE------LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 212 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
D + + L+ LL+ DP RLTA +AL+HPFF R
Sbjct: 330 DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 120 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 152
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 153 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 120 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 152
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 153 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 121 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 153
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 154 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 29/110 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH D+K +NVLL + +K+ D+ S D + +R
Sbjct: 145 LHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRR---------------- 186
Query: 65 YERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTG 109
N + T ++ APEVI + + D+WS+G +E+ G
Sbjct: 187 ------NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 34/113 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H D+K +NVLL S S + DFG
Sbjct: 182 LHTRRILHGDVKADNVLLSSD--------------------------GSRAALCDFGHAL 215
Query: 65 YERPDQ--------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+PD +YI T + APEV++G DIWS C+++ + G
Sbjct: 216 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 34/113 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H D+K +NVLL S S + DFG
Sbjct: 180 LHTRRILHGDVKADNVLLSSD--------------------------GSRAALCDFGHAL 213
Query: 65 YERPDQ--------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+PD +YI T + APEV++G DIWS C+++ + G
Sbjct: 214 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 34/118 (28%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ + H D+KPEN L ++ KS IK++DFG +
Sbjct: 184 LHNQGICHRDIKPENFLFSTN-------------------------KSFEIKLVDFGLSK 218
Query: 65 --YERPDQNYI-----VSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALF 113
Y+ + Y T ++ APEV+ +Y CD WS G +L L G F
Sbjct: 219 EFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL NVLLV+ Y K+ DFG + R D+
Sbjct: 133 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 165
Query: 71 NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
N + H + APE I ++ D+WS G ++ E G+ ++ + E A
Sbjct: 166 NXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
Query: 124 MMER 127
M+E+
Sbjct: 226 MLEK 229
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 120 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 152
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 153 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 34/113 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H ++H D+K +NVLL S S + DFG
Sbjct: 166 LHTRRILHGDVKADNVLLSSD--------------------------GSRAALCDFGHAL 199
Query: 65 YERPDQ--------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+PD +YI T + APEV++G DIWS C+++ + G
Sbjct: 200 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 56 KVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVEL 106
K+ DFG + D NY+V + APE I +T+ D+WS G L EL
Sbjct: 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 21/100 (21%)
Query: 8 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 67
L +IH D+KP NVL+ + +K+ D+ S + S K ID G Y
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYL-----------VDSVAKTIDAGCKPYMA 221
Query: 68 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 107
P+ R + G++ DIWS+G ++EL
Sbjct: 222 PE----------RINPELNQKGYSVKSDIWSLGITMIELA 251
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 56 KVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVEL 106
K+ DFG + D NY+V + APE I +T+ D+WS G L EL
Sbjct: 201 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 256
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 120 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 152
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 121 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 153
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 120 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 152
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 120 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 152
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 120 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 152
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 153 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 56 KVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVEL 106
K+ DFG + D NY+V + APE I +T+ D+WS G L EL
Sbjct: 203 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 258
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 119 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 151
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 152 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 121 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 153
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 121 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 153
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 121 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 153
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 56 KVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVEL 106
K+ DFG + D NY+V + APE I +T+ D+WS G L EL
Sbjct: 208 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 120 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 152
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 121 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 153
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 49 MPKSSAIKVIDFG-STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 105
+ ++ IK+ DFG +T + P + + + T +Y +PE+ D+WS+GC+
Sbjct: 145 LTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYT 204
Query: 106 LCTGEALFQT 115
L G F T
Sbjct: 205 LLIGRPPFDT 214
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 221 LLQGLLRYDPTDRLTAREALRHPFFTRD 248
L+ LLR +P DRL+ L HPF +R+
Sbjct: 242 LIHQLLRRNPADRLSLSSVLDHPFMSRN 269
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 120 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 152
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 121 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 153
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 120 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 152
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 120 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 152
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 121 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 153
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 33/112 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + + H D+KPEN+LL D + +L K+ DFG T
Sbjct: 120 LHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLAT 152
Query: 65 YERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 110
R + N + T Y APE++ + P D+WS G +L + GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 21/107 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H IH +L NVLL + +K+ D+ + P+ Y++
Sbjct: 130 MAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV------------- 176
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
R D + S + APE + + Y D+WS G L EL T
Sbjct: 177 -----REDGD---SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 32/112 (28%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A +H H DLKPEN+L EY K +K+IDFG
Sbjct: 122 AYVHSQGYAHRDLKPENLLF--DEYHK-------------------------LKLIDFGL 154
Query: 63 TTYERPDQNYIVST----RHYRAPEVILGLGW-TYPCDIWSVGCILVELCTG 109
+ +++Y + T Y APE+I G + D+WS+G +L L G
Sbjct: 155 CAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 221 LLQGLLRYDPTDRLTAREALRHPFFTRDH 249
LLQ +L+ DP R++ + L HP+ +D+
Sbjct: 240 LLQQMLQVDPKKRISMKNLLNHPWIMQDY 268
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 21/100 (21%)
Query: 8 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 67
L +IH D+KP NVL+ + +K+ D+ S + D + K ID G Y
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA-----------KDIDAGCKPYMA 177
Query: 68 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 107
P+ R + G++ DIWS+G ++EL
Sbjct: 178 PE----------RINPELNQKGYSVKSDIWSLGITMIELA 207
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD Y ++ +K
Sbjct: 166 IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK-------------- 211
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE I +T D+WS G +L E+ +
Sbjct: 212 --------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A +H L +IH DLKP+N+L+ +S + + S F K +D G
Sbjct: 147 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF------GLCKKLDSGQ 200
Query: 63 TTYERPDQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCIL 103
+ R + N T +RAPE++ T DI+S+GC+
Sbjct: 201 XXF-RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 216 GDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
+ T L+ ++ +DP R TA + LRHP F
Sbjct: 284 AEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A +H L +IH DLKP+N+L+ +S + + S F K +D G
Sbjct: 147 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF------GLCKKLDSGQ 200
Query: 63 TTYERPDQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCIL 103
+ R + N T +RAPE++ T DI+S+GC+
Sbjct: 201 XXF-RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 216 GDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
+ T L+ ++ +DP R TA + LRHP F
Sbjct: 284 AEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 23/105 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ IH D+K N+LL + K+ D+ + + K F T
Sbjct: 149 LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQTV 190
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
+ IV T Y APE + G T DI+S G +L+E+ TG
Sbjct: 191 M----XSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A +H L +IH DLKP+N+L+ +S + + S F K +D G
Sbjct: 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF------GLCKKLDSGQ 182
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLG-------WTYPCDIWSVGCIL 103
+++ R + N T +RAPE++ T DI+S+GC+
Sbjct: 183 SSF-RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 216 GDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
+ T L+ ++ +DP R TA + LRHP F
Sbjct: 270 AEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH D+K N+ L +K+ D+ + +K GS
Sbjct: 148 LHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA-----------------TVKSRWSGSQQ 190
Query: 65 YERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
E+P + + + APEVI +++ D++S G +L EL TGE + N +
Sbjct: 191 VEQPTGSVL-----WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ 245
Query: 122 LAMM 125
+ M
Sbjct: 246 IIFM 249
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL NVLLV+ Y K+ D+ S D SY+ + + P +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT-------------ARSAGKWPLK 178
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 127
Y APE I ++ D+WS G + E L G+ ++ + E +A +E+
Sbjct: 179 WY--------APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 21/107 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H IH +L NVLL + +K+ D+ + P+ Y++
Sbjct: 130 MAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV------------- 176
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
R D + S + APE + + Y D+WS G L EL T
Sbjct: 177 -----REDGD---SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 29/111 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK NVL+ I++ D+ S K T
Sbjct: 133 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK----------------------T 170
Query: 65 YERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 110
++ D + T ++ APEV++ + Y DIWS+G L+E+ E
Sbjct: 171 LQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 21/98 (21%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL N+L+ S ++K+ D+ + P D Y+ P Q
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY-----------------VVREPGQ 178
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ I + APE + ++ D+WS G +L EL T
Sbjct: 179 SPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 30/103 (29%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H + +++ DLKPEN++L + +K+ID G+ +
Sbjct: 198 LHSIGLVYNDLKPENIMLTEEQ----------------------------LKLIDLGAVS 229
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 107
Y+ T ++APE++ G T DI++VG L L
Sbjct: 230 RIN-SFGYLYGTPGFQAPEIVR-TGPTVATDIYTVGRTLAALT 270
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 21/98 (21%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL N+L+ S ++K+ D+ + P D Y+ P Q
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY-----------------VVREPGQ 191
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ I + APE + ++ D+WS G +L EL T
Sbjct: 192 SPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 23/105 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ IH D+K N+LL + K+ D+ + + K F T
Sbjct: 149 LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQTV 190
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
IV T Y APE + G T DI+S G +L+E+ TG
Sbjct: 191 MXX----RIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 29/111 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK NVL+ I++ D+ S K T
Sbjct: 125 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK----------------------T 162
Query: 65 YERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 110
++ D + T ++ APEV++ + Y DIWS+G L+E+ E
Sbjct: 163 LQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 21/98 (21%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL N+L+ S ++K+ D+ + P D Y+ P Q
Sbjct: 137 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY-----------------VVREPGQ 179
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ I + APE + ++ D+WS G +L EL T
Sbjct: 180 SPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 33/172 (19%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A + + IH DL+ N+L+ + K+ D+ + +D+ Y R IK
Sbjct: 118 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK------ 170
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 121
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 171 ----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 214
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 215 IQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD Y ++ +K
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------------- 258
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 259 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 286
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD Y ++ +K
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------------- 206
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 207 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 29/104 (27%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +I+ DLKP N+ LV ++ +K+ DFG T
Sbjct: 138 IHSKKLINRDLKPSNIFLVDTKQVKIG---------------------------DFGLVT 170
Query: 65 YERPDQNYIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ D S T Y +PE I + D++++G IL EL
Sbjct: 171 SLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD Y ++ +K
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------------- 265
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 266 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 293
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD Y ++ +K
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------------- 260
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 261 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 288
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + IH DL+ N+L+ +S K+ D+ + +D+ Y R IK
Sbjct: 297 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIK----- 350
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L+E+ T G + N E
Sbjct: 351 -----------------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 393
Query: 121 HLAMMER 127
+ +ER
Sbjct: 394 VIRALER 400
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD Y ++ +K
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------------- 206
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 207 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD Y ++ +K
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------------- 267
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 268 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 295
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
+ +H +IH +LKP N+ + S +K+ D+ + K + +S I +D
Sbjct: 129 LSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA----------KNVHRSLDILKLDSQ 178
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVE 105
+ + + T Y A EV+ G G + D +S+G I E
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 39/127 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF--GS 62
+H + H DLKPEN+L S E K S +K+ DF GS
Sbjct: 127 LHTKGIAHRDLKPENILCESPE------------------------KVSPVKICDFDLGS 162
Query: 63 --------TTYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCILVELCTG 109
T P+ + Y APEV+ + CD+WS+G +L + +G
Sbjct: 163 GMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
Query: 110 EALFQTH 116
F H
Sbjct: 223 YPPFVGH 229
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD Y ++ +K
Sbjct: 166 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------------- 211
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 212 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 24/118 (20%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL+ N+L+ +S K+ D+ + +D+ Y R IK
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIK-------------- 177
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 127
+ APE I +T D+WS G +L+E+ T G + N E + +ER
Sbjct: 178 --------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 227
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 33/172 (19%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A + + IH DL+ N+L+ + K+ D+ + +D+ Y R IK
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK------ 175
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 121
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 176 ----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 220 IQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 23/105 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ IH D+K N+LL + K+ D+ + S F + S
Sbjct: 140 LHENHHIHRDIKSANILLDEAFTAKISDFG----LARASEKFAQXVXXS----------- 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
IV T Y APE + G T DI+S G +L+E+ TG
Sbjct: 185 -------RIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG 221
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 33/173 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH DL+ N+L+ + K+ D+ + +D+ Y R IK
Sbjct: 128 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK----- 181
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 182 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 224
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 225 VIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + + S GS
Sbjct: 136 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-----------------GSHQ 178
Query: 65 YERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 179 FEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
Query: 122 LAMM 125
+ M
Sbjct: 234 IIEM 237
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + + S GS
Sbjct: 136 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-----------------GSHQ 178
Query: 65 YERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 179 FEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
Query: 122 LAMM 125
+ M
Sbjct: 234 IIEM 237
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD Y ++ +K
Sbjct: 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------------- 252
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 253 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 280
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD Y ++ +K
Sbjct: 172 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------------- 217
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 218 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 245
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 33/173 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH DL+ N+L+ + K+ D+ + +D+ Y R IK
Sbjct: 127 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK----- 180
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 181 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 223
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 224 VIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD Y ++ +K
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------------- 215
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 216 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 43/141 (30%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY-ERP 68
+IH D+K EN+++ D+ IK+IDFGS Y ER
Sbjct: 151 IIHRDIKDENIVIAE-------DF--------------------TIKLIDFGSAAYLERG 183
Query: 69 DQNY-IVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALF-QTHENLEH---- 121
Y T Y APEV++G + P ++WS+G L L E F + E +E
Sbjct: 184 KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHP 243
Query: 122 --------LAMMERVLGPLPQ 134
++++ +L P+P+
Sbjct: 244 PYLVSKELMSLVSGLLQPVPE 264
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 184
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 185 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 184
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 185 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 212
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 213 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 21/107 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H IH DL NVLL + +K+ D+ + P+ ++
Sbjct: 147 MAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV------------- 193
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
R D + S + APE + + Y D+WS G L EL T
Sbjct: 194 -----REDGD---SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 33/173 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH DL+ N+L+ + K+ D+ + +D+ Y R IK
Sbjct: 132 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK----- 185
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 186 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 228
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 229 VIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 187
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 188 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 186
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 187 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 188
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 189 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 22/119 (18%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H L +H D+KP+N+LL +I++ D+ S L D + ++ G+
Sbjct: 178 VHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD---------GTVRSLVAVGTPD 228
Query: 65 YERPDQNYIV---STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
Y P+ V PE CD W++G E+ G+ F E
Sbjct: 229 YLSPEILQAVGGGPGTGSYGPE----------CDWWALGVFAYEMFYGQTPFYADSTAE 277
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 185
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 186 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 199
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 200 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 181
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 182 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 184
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 185 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 180
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 181 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 199
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 200 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 179
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 180 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
IH DL N+L+ + +K+ D+ + P+D K + P S I
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------------- 181
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + ++ D+WS G +L EL T
Sbjct: 182 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H +IH D+KPEN+LL +K+ D+ S+H P +R
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRR----------------- 178
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 115
+ T Y PE+I G D+W +G + EL G F++
Sbjct: 179 -----KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFES 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 21/100 (21%)
Query: 8 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 67
L +IH D+KP NVL+ + +K D+ S + D + K ID G Y
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVA-----------KDIDAGCKPYXA 204
Query: 68 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 107
P+ R + G++ DIWS+G +EL
Sbjct: 205 PE----------RINPELNQKGYSVKSDIWSLGITXIELA 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 32/134 (23%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
+IH D+KP N+LL IK+ D+ S D +
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA------------------------- 180
Query: 70 QNYIVSTRHYRAPEVILGLGWTYP-----CDIWSVGCILVELCTGEALFQT-HENLEHLA 123
++ Y APE I T P D+WS+G LVEL TG+ ++ + E L
Sbjct: 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLT 240
Query: 124 MMERVLGP-LPQHM 136
+ + P LP HM
Sbjct: 241 KVLQEEPPLLPGHM 254
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + + S GS
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSHQ 190
Query: 65 YERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 191 FEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
Query: 122 LAMM 125
+ M
Sbjct: 246 IIFM 249
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 346
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 347 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389
Query: 121 HLAMMER 127
L +ER
Sbjct: 390 VLDQVER 396
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + + S GS
Sbjct: 140 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSHQ 182
Query: 65 YERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 183 FEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 237
Query: 122 LAMM 125
+ M
Sbjct: 238 IIFM 241
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 346
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 347 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389
Query: 121 HLAMMER 127
L +ER
Sbjct: 390 VLDQVER 396
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 346
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 347 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389
Query: 121 HLAMMER 127
L +ER
Sbjct: 390 VLDQVER 396
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 21/107 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H IH L NVLL + +K+ D+ + P+ Y++
Sbjct: 124 MAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV------------- 170
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
R D + S + APE + + Y D+WS G L EL T
Sbjct: 171 -----REDGD---SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 376 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 429
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 430 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 472
Query: 121 HLAMMER 127
L +ER
Sbjct: 473 VLDQVER 479
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 21/107 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A +H IH L NVLL + +K+ D+ + P+ Y++
Sbjct: 125 MAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV------------- 171
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
R D + S + APE + + Y D+WS G L EL T
Sbjct: 172 -----REDGD---SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 180
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 181 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 121 HLAMMER 127
L +ER
Sbjct: 224 VLDQVER 230
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 180
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 181 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 121 HLAMMER 127
L +ER
Sbjct: 224 VLDQVER 230
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 180
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 181 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 121 HLAMMER 127
L +ER
Sbjct: 224 VLDQVER 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 23/105 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H+ IH D+K N+LL + K+ D+ R + A V+
Sbjct: 143 LHENHHIHRDIKSANILLDEAFTAKISDFG-----------LARASEKFAQXVM------ 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
IV T Y APE + G T DI+S G +L+E+ TG
Sbjct: 186 -----XXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 224
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 25/118 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+HD +I+ DLK +NVLL + K+ D+ M K G TT
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFG--------------MCKEGICN----GVTT 181
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
T Y APE++ + + D W++G +L E+ G A F+ EN + L
Sbjct: 182 AT------FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA-ENEDDL 232
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 177
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 178 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 220
Query: 121 HLAMMER 127
L +ER
Sbjct: 221 VLDQVER 227
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 180
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 181 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 121 HLAMMER 127
L +ER
Sbjct: 224 VLDQVER 230
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 118 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 171
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 172 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 214
Query: 121 HLAMMER 127
L +ER
Sbjct: 215 VLDQVER 221
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + + S GS
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSHQ 162
Query: 65 YERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 163 FEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
Query: 122 LAMM 125
+ M
Sbjct: 218 IIFM 221
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 180
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 181 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 121 HLAMMER 127
L +ER
Sbjct: 224 VLDQVER 230
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ ++ ++H DL N+L+ +K+ D+ S ++ SY KR +K
Sbjct: 166 LAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVK-------- 217
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E + +T D+WS G +L E+ T
Sbjct: 218 --------------WMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A +H L +IH DLKP+N+L+ +S + + S F K +D G
Sbjct: 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF------GLCKKLDSGQ 182
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLG-------WTYPCDIWSVGCIL 103
+ R + N T +RAPE++ T DI+S+GC+
Sbjct: 183 XXF-RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 216 GDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
+ T L+ ++ +DP R TA + LRHP F
Sbjct: 270 AEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 38/180 (21%)
Query: 74 VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGE-ALFQTHENLEHLAMMERVLGP 131
T +RAPEV+ T D+WS G I + L +G ++ ++L LA + + G
Sbjct: 207 AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRG- 265
Query: 132 LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCL 191
SRE+I++ + + + + C
Sbjct: 266 -----------------------------SRETIQAAKTFGKSILCSKEVPAQDLRKLCE 296
Query: 192 AFRCTDCIASFCQNLIMQHVDHSAG------DLTHLLQGLLRYDPTDRLTAREALRHPFF 245
R D + I H + G + LL LL +P R+TA EAL HPFF
Sbjct: 297 RLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFF 356
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 180
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 181 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 121 HLAMMER 127
L +ER
Sbjct: 224 VLDQVER 230
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ +D+ Y R IK
Sbjct: 294 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLG-RLIEDNEYTARQGAKFPIK----- 347
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 348 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 390
Query: 121 HLAMMER 127
L +ER
Sbjct: 391 VLDQVER 397
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 116 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 169
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 170 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 212
Query: 121 HLAMMER 127
L +ER
Sbjct: 213 VLDQVER 219
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ Y R IK
Sbjct: 120 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 173
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 174 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 216
Query: 121 HLAMMER 127
L +ER
Sbjct: 217 VLDQVER 223
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + +K GS
Sbjct: 124 LHAKSIIHRDLKSNNIFLHEDNTVKIGDF-----------------GLATVKSRWSGSHQ 166
Query: 65 YERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 167 FEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 221
Query: 122 LAMM 125
+ M
Sbjct: 222 IIEM 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH D+ NVLL + K+ D+ + DS+Y + +K
Sbjct: 182 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-------------- 227
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 228 --------WMAPESIFDCVYTVQSDVWSYGILLWEI 255
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH D+ NVLL + K+ D+ + DS+Y + +K
Sbjct: 186 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-------------- 231
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 232 --------WMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH D+ NVLL + K+ D+ + DS+Y + +K
Sbjct: 174 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-------------- 219
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 220 --------WMAPESIFDCVYTVQSDVWSYGILLWEI 247
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH D+ NVLL + K+ D+ + DS+Y + +K
Sbjct: 186 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-------------- 231
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 232 --------WMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 70/173 (40%), Gaps = 33/173 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH +L+ N+L+ + K+ D+ + +D+ Y R IK
Sbjct: 118 MAFIEERNYIHRNLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK----- 171
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 172 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 214
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 215 VIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH D+ NVLL + K+ D+ + DS+Y + +K
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-------------- 225
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 226 --------WMAPESIFDCVYTVQSDVWSYGILLWEI 253
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + +K GS
Sbjct: 147 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----------------TVKSRWSGSHQ 189
Query: 65 YERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 190 FEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 244
Query: 122 LAMM 125
+ M
Sbjct: 245 IIFM 248
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + +K GS
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----------------TVKSRWSGSHQ 190
Query: 65 YERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 191 FEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
Query: 122 LAMM 125
+ M
Sbjct: 246 IIFM 249
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH D+ NVLL + K+ D+ + DS+Y + +K
Sbjct: 188 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-------------- 233
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 234 --------WMAPESIFDCVYTVQSDVWSYGILLWEI 261
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H +L NVLLV+ Y K+ D+ S D SY+ + + P +
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT-------------ARSAGKWPLK 504
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 127
Y APE I ++ D+WS G + E L G+ ++ + E +A +E+
Sbjct: 505 WY--------APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 44/120 (36%), Gaps = 39/120 (32%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
+H+ + H DLKPEN+L + S +K+ DFG
Sbjct: 127 LHNKGIAHRDLKPENILCEHPNQV------------------------SPVKICDFGLGS 162
Query: 62 -------STTYERPDQNYIVSTRHYRAPEVILGLG-----WTYPCDIWSVGCILVELCTG 109
+ P+ + Y APEV+ + CD+WS+G IL L +G
Sbjct: 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL N+L+ + KV D+ + +D+ Y R IK
Sbjct: 127 MAYVERMNYVHRDLAAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----- 180
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 181 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 121 HLAMMER 127
L +ER
Sbjct: 224 VLDQVER 230
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + +K GS
Sbjct: 122 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----------------TVKSRWSGSHQ 164
Query: 65 YERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 165 FEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 219
Query: 122 LAMM 125
+ M
Sbjct: 220 IIFM 223
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + +K GS
Sbjct: 125 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----------------TVKSRWSGSHQ 167
Query: 65 YERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 168 FEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
Query: 122 LAMM 125
+ M
Sbjct: 223 IIFM 226
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 34.3 bits (77), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH DL+ N+L+ + K+ D+ + +D+ R IK
Sbjct: 118 MAYIERMNYIHRDLRSANILVGNGLICKIADFGLA-RLIEDNEXTARQGAKFPIK----- 171
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 172 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE 214
Query: 121 HLAMMER 127
L +ER
Sbjct: 215 VLEQVER 221
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD ++ +K
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-------------- 206
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 207 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD ++ +K
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-------------- 206
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 207 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A + + C+IH DL N L+ ++ IKV DFG
Sbjct: 117 AYLEEACVIHRDLAARNCLV---------------------------GENQVIKVSDFGM 149
Query: 63 TTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 116
T + DQ Y ST + +PEV ++ D+WS G ++ E+ + G+ ++
Sbjct: 150 TRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 208
Query: 117 ENLE 120
N E
Sbjct: 209 SNSE 212
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD ++ +K
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-------------- 215
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 216 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + + S GS
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQ 162
Query: 65 YERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 163 FEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
Query: 122 LAMM 125
+ M
Sbjct: 218 IIFM 221
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 30/127 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ DL +H DL NVL+ S+ KV D+ S +V++
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS-------------------RVLE----- 202
Query: 65 YERPDQNYIVSTR----HYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENL 119
+ PD Y + + APE I ++ D+WS G ++ E L GE + N
Sbjct: 203 -DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR 261
Query: 120 EHLAMME 126
+ ++ +E
Sbjct: 262 DVISSVE 268
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + + S GS
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQ 162
Query: 65 YERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 163 FEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
Query: 122 LAMM 125
+ M
Sbjct: 218 IIFM 221
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A + + C+IH DL N L+ ++ IKV DFG
Sbjct: 120 AYLEEACVIHRDLAARNCLV---------------------------GENQVIKVSDFGM 152
Query: 63 TTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 116
T + DQ Y ST + +PEV ++ D+WS G ++ E+ + G+ ++
Sbjct: 153 TRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 211
Query: 117 ENLE 120
N E
Sbjct: 212 SNSE 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A + + C+IH DL N L+ ++ IKV DFG
Sbjct: 115 AYLEEACVIHRDLAARNCLV---------------------------GENQVIKVSDFGM 147
Query: 63 TTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 116
T + DQ Y ST + +PEV ++ D+WS G ++ E+ + G+ ++
Sbjct: 148 TRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 206
Query: 117 ENLE 120
N E
Sbjct: 207 SNSE 210
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD ++ +K
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-------------- 215
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 216 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A + + C+IH DL N L+ ++ IKV DFG
Sbjct: 118 AYLEEACVIHRDLAARNCLV---------------------------GENQVIKVSDFGM 150
Query: 63 TTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 116
T + DQ Y ST + +PEV ++ D+WS G ++ E+ + G+ ++
Sbjct: 151 TRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 209
Query: 117 ENLE 120
N E
Sbjct: 210 SNSE 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH DLK N+ L +K+ D+ + +K GS
Sbjct: 125 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----------------TVKSRWSGSHQ 167
Query: 65 YERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
+E+ + + + APEVI +++ D+++ G +L EL TG+ + N +
Sbjct: 168 FEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
Query: 122 LAMM 125
+ M
Sbjct: 223 IIFM 226
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 33.9 bits (76), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A + + C+IH DL N L+ ++ IKV DFG
Sbjct: 137 AYLEEACVIHRDLAARNCLV---------------------------GENQVIKVSDFGM 169
Query: 63 TTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 116
T + DQ Y ST + +PEV ++ D+WS G ++ E+ + G+ ++
Sbjct: 170 TRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 228
Query: 117 ENLE 120
N E
Sbjct: 229 SNSE 232
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 33.9 bits (76), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD ++ +K
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-------------- 215
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 216 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ + R IK
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEWTARQGAKFPIK----- 177
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 178 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 220
Query: 121 HLAMMER 127
L +ER
Sbjct: 221 VLDQVER 227
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 26/125 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 147 LSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK----------- 195
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 121
+ R + APE I +T D+WS G ++ E+ + GE + N +
Sbjct: 196 -----------IPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 243
Query: 122 LAMME 126
+ +E
Sbjct: 244 IKAIE 248
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 29/115 (25%)
Query: 5 MHDLCMIHTDLKPENVLL-----VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 59
+H+ + H DLKPEN+L VS I D S + D S P S+ +
Sbjct: 127 LHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS-----PISTPELLTP 181
Query: 60 FGSTTYERPDQNYIVSTRHYRAPEVILGLG-----WTYPCDIWSVGCILVELCTG 109
GS Y APEV+ + CD+WS+G IL L +G
Sbjct: 182 CGSA--------------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D+ ++H DL NVL+ S ++K+ D+ + +++D T
Sbjct: 135 LEDVRLVHRDLAARNVLVKSPNHVKITDFGLA-------------------RLLDIDETE 175
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
Y + + A E IL +T+ D+WS G + EL T
Sbjct: 176 YHADGGKVPI---KWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL NVL+ + +K+ D+ + DS+Y R +K
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK-------------- 239
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE + +T D+WS G +L E+
Sbjct: 240 --------WMAPESLFEGIYTIKSDVWSYGILLWEI 267
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 45/115 (39%), Gaps = 28/115 (24%)
Query: 6 HDLCMIHTDLKPENVLLVSSEY--IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
H + + H DLK EN LL S +K+ D+ S +S PKS+
Sbjct: 132 HAMQVAHRDLKLENTLLDGSPAPRLKIADFGYS-----KASVLHSQPKSA---------- 176
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 117
V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 177 ----------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 33/173 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH DL+ N+L+ + K+ D+ + +D+ R IK
Sbjct: 131 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK----- 184
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 185 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 227
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 228 VIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 33/173 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH DL+ N+L+ + K+ D+ + +D+ R IK
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK----- 175
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 176 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 219 VIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 33/173 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH DL+ N+L+ + K+ D+ + +D+ R IK
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK----- 175
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 176 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 219 VIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL +K+ D+ + KD ++ +K
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLK-------------- 215
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I +T D+WS G +L E+
Sbjct: 216 --------WMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 33/173 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH DL+ N+L+ + K+ D+ + +D+ R IK
Sbjct: 124 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK----- 177
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 178 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 220
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 221 VIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ ++ ++H DL N+L+ +K+ D+ S ++ S KR +K
Sbjct: 166 LAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK-------- 217
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E + +T D+WS G +L E+ T
Sbjct: 218 --------------WMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 26/125 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 132 LSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK----------- 180
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 121
+ R + APE I +T D+WS G ++ E+ + GE + N +
Sbjct: 181 -----------IPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 228
Query: 122 LAMME 126
+ +E
Sbjct: 229 IKAIE 233
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 33/173 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH DL+ N+L+ + K+ D+ + +D+ R IK
Sbjct: 128 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK----- 181
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 182 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 224
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 225 VIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 33/173 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH DL+ N+L+ + K+ D+ + +D+ R IK
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDAEXTAREGAKFPIK----- 175
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 176 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 219 VIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 33/173 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH DL+ N+L+ + K+ D+ + +D+ R IK
Sbjct: 123 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK----- 176
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 177 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 219
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 220 VIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 33/173 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + IH DL+ N+L+ + K+ D+ + +D+ R IK
Sbjct: 130 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK----- 183
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE I +T D+WS G +L E+ T G + N E
Sbjct: 184 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 226
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 170
+ +ER + + R D E+ + RL W PE + + ++SV++
Sbjct: 227 VIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 26/125 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 126 LSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK----------- 174
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 121
+ R + APE I +T D+WS G ++ E+ + GE + N +
Sbjct: 175 -----------IPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 222
Query: 122 LAMME 126
+ +E
Sbjct: 223 IKAIE 227
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 24/117 (20%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H D+ NVL+ S++ +K+ D+ S + +DS+Y+K IK
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK-------------- 182
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVG-CILVELCTGEALFQTHENLEHLAMME 126
+ APE I +T D+W G C+ L G FQ +N + + +E
Sbjct: 183 --------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 231
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 53 SAIKVIDFGSTTYERPDQNYIVSTR------HYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+KV DFG + Y D+ S+R + PEV++ ++ DIW+ G ++ E+
Sbjct: 142 GVVKVSDFGLSRYVLDDE--YTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
Query: 107 CTGEAL----FQTHENLEHLAMMERVLGP 131
+ + F E EH+A R+ P
Sbjct: 200 YSLGKMPYERFTNSETAEHIAQGLRLYRP 228
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 24/117 (20%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H D+ NVL+ S++ +K+ D+ S + +DS+Y+K IK
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK-------------- 180
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVG-CILVELCTGEALFQTHENLEHLAMME 126
+ APE I +T D+W G C+ L G FQ +N + + +E
Sbjct: 181 --------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 229
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 24/117 (20%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H D+ NVL+ S++ +K+ D+ S + +DS+Y+K IK
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK-------------- 177
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVG-CILVELCTGEALFQTHENLEHLAMME 126
+ APE I +T D+W G C+ L G FQ +N + + +E
Sbjct: 178 --------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 24/117 (20%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H D+ NVL+ S++ +K+ D+ S + +DS+Y+K IK
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK-------------- 557
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVG-CILVELCTGEALFQTHENLEHLAMME 126
+ APE I +T D+W G C+ L G FQ +N + + +E
Sbjct: 558 --------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 606
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 24/117 (20%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H D+ NVL+ S++ +K+ D+ S + +DS+Y+K IK
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK-------------- 179
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVG-CILVELCTGEALFQTHENLEHLAMME 126
+ APE I +T D+W G C+ L G FQ +N + + +E
Sbjct: 180 --------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 228
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 24/117 (20%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H D+ NVL+ S++ +K+ D+ S + +DS+Y+K IK
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK-------------- 205
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVG-CILVELCTGEALFQTHENLEHLAMME 126
+ APE I +T D+W G C+ L G FQ +N + + +E
Sbjct: 206 --------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 254
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 21/98 (21%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL N+L+ S ++K+ D+ + P +D P Q
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLAKLLP-----------------LDKDXXVVREPGQ 175
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ I + APE + ++ D+WS G +L EL T
Sbjct: 176 SPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 24/117 (20%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H D+ NVL+ S++ +K+ D+ S + +DS+Y+K IK
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK-------------- 177
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVG-CILVELCTGEALFQTHENLEHLAMME 126
+ APE I +T D+W G C+ L G FQ +N + + +E
Sbjct: 178 --------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 52/129 (40%), Gaps = 29/129 (22%)
Query: 6 HDLCMIHTDLKPENVLLVSSEY--IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
H + + H DLK EN LL S +K+ D+ S SS PKS+
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPRLKICDFGYS-----KSSVLHSQPKST---------- 177
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQT-HENLEH 121
V T Y APEV+L + D+WS G L + G F+ E ++
Sbjct: 178 ----------VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY 227
Query: 122 LAMMERVLG 130
++R+L
Sbjct: 228 RKTIQRILS 236
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 55 IKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT- 108
+KV DFG T Y DQ Y+ S + APEV ++ D+W+ G ++ E+ +
Sbjct: 143 VKVSDFGMTRYVLDDQ-YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSL 201
Query: 109 GEALFQTHENLE 120
G+ + + N E
Sbjct: 202 GKMPYDLYTNSE 213
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 218 LTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
L+ LL+G+L Y+P R + R+ +H +F + H
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL N L+ ++ +K+ D+ S D ST Y R
Sbjct: 155 VHRDLATRNCLVGANLLVKIGDFGMSR---------------------DVYSTDYYRVGG 193
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ ++ R + PE I+ +T D+WS G IL E+ T
Sbjct: 194 HTMLPIR-WMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 24/117 (20%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H D+ NVL+ S++ +K+ D+ S + +DS+Y+K IK
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK-------------- 174
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVG-CILVELCTGEALFQTHENLEHLAMME 126
+ APE I +T D+W G C+ L G FQ +N + + +E
Sbjct: 175 --------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 223
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 21/106 (19%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI-KVIDF 60
A +H L ++H DLKP N+L + P K M + K +
Sbjct: 131 LAHLHSLNIVHRDLKPHNIL---------------ISMPNAHGKIKAMISDFGLCKKLAV 175
Query: 61 GSTTYERPDQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCIL 103
G ++ R ++ + T + APE++ TY DI+S GC+
Sbjct: 176 GRHSFSR--RSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF 219
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 221 LLQGLLRYDPTDRLTAREALRHPFF 245
L++ ++ DP R +A+ L+HPFF
Sbjct: 263 LIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 53 SAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELC 107
+KV DFG + Y D+ Y S + PEV++ ++ DIW+ G ++ E+
Sbjct: 137 GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195
Query: 108 TGEAL----FQTHENLEHLAMMERVLGP 131
+ + F E EH+A R+ P
Sbjct: 196 SLGKMPYERFTNSETAEHIAQGLRLYRP 223
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +K+ D+ + D + Y +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR---------------------DINNIDYYKKTT 217
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G ++ E+ T
Sbjct: 218 NGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 28/115 (24%)
Query: 6 HDLCMIHTDLKPENVLLVSSEY--IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
H + + H DLK EN LL S +K+ D+ S SS PKS+
Sbjct: 131 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-----KSSVLHSQPKST---------- 175
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 117
V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 176 ----------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 53 SAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELC 107
+KV DFG + Y D+ Y S + PEV++ ++ DIW+ G ++ E+
Sbjct: 141 GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 199
Query: 108 TGEAL----FQTHENLEHLAMMERVLGP 131
+ + F E EH+A R+ P
Sbjct: 200 SLGKMPYERFTNSETAEHIAQGLRLYRP 227
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 23/98 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL+ NVL+ S K+ D+ + +D+ Y R IK
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIK-------------- 176
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE I +T D+WS G +L E+ T
Sbjct: 177 --------WTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ R IK
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEXTARQGAKFPIK----- 180
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 181 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 121 HLAMMER 127
L +ER
Sbjct: 224 VLDQVER 230
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 26/125 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 140 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------- 188
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 121
+ R + APE I +T D+WS G ++ E+ + GE + N +
Sbjct: 189 -----------IPIR-WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDV 236
Query: 122 LAMME 126
+ +E
Sbjct: 237 IKAVE 241
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 28/115 (24%)
Query: 6 HDLCMIHTDLKPENVLLVSSEY--IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
H + + H DLK EN LL S +K+ D+ S SS PKS+
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-----KSSVLHSQPKST---------- 176
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 117
V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 177 ----------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +K+ D+ + D + Y +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR---------------------DINNIDYYKKTT 217
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G ++ E+ T
Sbjct: 218 NGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ ++ ++H DL N+L+ +K+ D+ S ++ S KR +K
Sbjct: 166 LAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK-------- 217
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E + +T D+WS G +L E+ T
Sbjct: 218 --------------WMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ L +H DL N L+ +K+ D+ S D ST
Sbjct: 174 LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR---------------------DIYSTD 212
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
Y R ++ R + PE IL +T D+WS G +L E+ T
Sbjct: 213 YYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 53 SAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELC 107
+KV DFG + Y D+ Y S + PEV++ ++ DIW+ G ++ E+
Sbjct: 142 GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 200
Query: 108 TGEAL----FQTHENLEHLAMMERVLGP 131
+ + F E EH+A R+ P
Sbjct: 201 SLGKMPYERFTNSETAEHIAQGLRLYRP 228
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +K+ D+ + D + Y +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR---------------------DINNIDYYKKTT 217
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G ++ E+ T
Sbjct: 218 NGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ L +H DL N L+ +K+ D+ S D ST
Sbjct: 151 LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR---------------------DIYSTD 189
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
Y R ++ R + PE IL +T D+WS G +L E+ T
Sbjct: 190 YYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 53 SAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELC 107
+KV DFG + Y D+ Y S + PEV++ ++ DIW+ G ++ E+
Sbjct: 157 GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 215
Query: 108 TGEAL----FQTHENLEHLAMMERVLGP 131
+ + F E EH+A R+ P
Sbjct: 216 SLGKMPYERFTNSETAEHIAQGLRLYRP 243
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +K+ D+ + D + Y +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR---------------------DINNIDYYKKTT 217
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G ++ E+ T
Sbjct: 218 NGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H DL+ N+L+ + KV D+ + +D+ R IK
Sbjct: 117 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEXTARQGAKFPIK----- 170
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ APE L +T D+WS G +L EL T G + N E
Sbjct: 171 -----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 213
Query: 121 HLAMMER 127
L +ER
Sbjct: 214 VLDQVER 220
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ L +H DL N L+ +K+ D+ S D ST
Sbjct: 145 LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR---------------------DIYSTD 183
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
Y R ++ R + PE IL +T D+WS G +L E+ T
Sbjct: 184 YYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +K+ D+ + D + Y +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR---------------------DINNIDYYKKTT 217
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G ++ E+ T
Sbjct: 218 NGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 18/140 (12%)
Query: 41 KDSSYFKRMPKSSAIKVIDFGSTT--YERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIW 97
KD + + + A K+IDFGS ++ P ++ TR Y PE I + P +W
Sbjct: 166 KDENILIDLRRGCA-KLIDFGSGALLHDEPYTDFD-GTRVYSPPEWISRHQYHALPATVW 223
Query: 98 SVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE 157
S+G +L ++ G+ F+ + + + H V +RR P
Sbjct: 224 SLGILLYDMVCGDIPFERDQEILEAEL----------HFPAHVSPDCCALIRRCLAPKP- 272
Query: 158 GAASRESIKSVMKLPRLQVP 177
+SR S++ ++ P +Q P
Sbjct: 273 --SSRPSLEEILLDPWMQTP 290
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 53 SAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELC 107
+KV DFG + Y D+ Y S + PEV++ ++ DIW+ G ++ E+
Sbjct: 148 GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 206
Query: 108 TGEAL----FQTHENLEHLAMMERVLGP 131
+ + F E EH+A R+ P
Sbjct: 207 SLGKMPYERFTNSETAEHIAQGLRLYRP 234
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +K+ D+ + D + Y +
Sbjct: 171 IHRDLAARNVLVTENNVMKIADFGLAR---------------------DINNIDYYKKTT 209
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G ++ E+ T
Sbjct: 210 NGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +K+ D+ + D + Y +
Sbjct: 168 IHRDLAARNVLVTENNVMKIADFGLAR---------------------DINNIDYYKKTT 206
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G ++ E+ T
Sbjct: 207 NGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 53 SAIKVIDFGSTTYERPDQ-NYIVSTR---HYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+KV DFG + Y D+ V ++ + PEV++ ++ DIW+ G ++ E+ +
Sbjct: 157 GVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
Query: 109 GEAL----FQTHENLEHLAMMERVLGP 131
+ F E EH+A R+ P
Sbjct: 217 LGKMPYERFTNSETAEHIAQGLRLYRP 243
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +K+ D+ + D + Y +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR---------------------DINNIDYYKNTT 217
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G ++ E+ T
Sbjct: 218 NGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +K+ D+ + D + Y +
Sbjct: 166 IHRDLTARNVLVTENNVMKIADFGLAR---------------------DINNIDYYKKTT 204
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G ++ E+ T
Sbjct: 205 NGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +K+ D+ + D + Y +
Sbjct: 225 IHRDLAARNVLVTENNVMKIADFGLAR---------------------DINNIDYYKKTT 263
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G ++ E+ T
Sbjct: 264 NGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1YQ3|A Chain A, Avian Respiratory Complex Ii With Oxaloacetate And
Ubiquinone
pdb|1YQ4|A Chain A, Avian Respiratory Complex Ii With 3-Nitropropionate And
Ubiquinone
pdb|2FBW|A Chain A, Avian Respiratory Complex Ii With Carboxin Bound
pdb|2FBW|N Chain N, Avian Respiratory Complex Ii With Carboxin Bound
pdb|2H88|A Chain A, Avian Mitochondrial Respiratory Complex Ii At 1.8 Angstrom
Resolution
pdb|2H88|N Chain N, Avian Mitochondrial Respiratory Complex Ii At 1.8 Angstrom
Resolution
pdb|2H89|A Chain A, Avian Respiratory Complex Ii With Malonate Bound
pdb|2WQY|A Chain A, Remodelling Of Carboxin Binding To The Q-Site Of Avian
Respiratory Complex Ii
pdb|2WQY|N Chain N, Remodelling Of Carboxin Binding To The Q-Site Of Avian
Respiratory Complex Ii
Length = 621
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 92 YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKR--VDRHAEKYVR 149
+P I+ GC++ E C GE + E MER P+ + + R V R +R
Sbjct: 253 HPTGIYGAGCLITEGCRGEGGILINSQGERF--MER-YAPVAKDLASRDVVSRSMTIEIR 309
Query: 150 RGRLDWPE 157
GR PE
Sbjct: 310 EGRGCGPE 317
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 41/113 (36%), Gaps = 24/113 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + + H DLK EN LL S P K SS PKS+
Sbjct: 132 HAMQVCHRDLKLENTLLDGS---PAPRLKICAFGYSKSSVLHSQPKST------------ 176
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 117
V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 177 --------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 24/117 (20%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H D+ NVL+ +++ +K+ D+ S + +DS+Y+K IK
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK-------------- 557
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVG-CILVELCTGEALFQTHENLEHLAMME 126
+ APE I +T D+W G C+ L G FQ +N + + +E
Sbjct: 558 --------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 606
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 24/117 (20%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H D+ NVL+ +++ +K+ D+ S + +DS+Y+K IK
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK-------------- 177
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVG-CILVELCTGEALFQTHENLEHLAMME 126
+ APE I +T D+W G C+ L G FQ +N + + +E
Sbjct: 178 --------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H DL N L+ + +K+ D+ S D ST Y R
Sbjct: 150 VHRDLATRNCLVGENLLVKIGDFGMSR---------------------DVYSTDYYRVGG 188
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ ++ R + PE I+ +T D+WS+G +L E+ T
Sbjct: 189 HTMLPIR-WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 22/96 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N+LL + +K+ D+ + K+ Y ++ +K
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLK-------------- 266
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ APE I ++ D+WS G +L E+
Sbjct: 267 --------WMAPESIFDKIYSTKSDVWSYGVLLWEI 294
>pdb|1ZOY|A Chain A, Crystal Structure Of Mitochondrial Respiratory Complex Ii
From Porcine Heart At 2.4 Angstroms
pdb|1ZP0|A Chain A, Crystal Structure Of Mitochondrial Respiratory Complex Ii
Bound With 3-Nitropropionate And
2-Thenoyltrifluoroacetone
pdb|3ABV|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-Biphenyl-3-Yl-2-Trifluoromethyl-Benzamide
pdb|3AE1|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With N-Phenyl-2-(Trifluoromethyl)-Benzamide
pdb|3AE2|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Hydroxy-N-Phenyl-Benzamide
pdb|3AE3|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Nitro-N-Phenyl-Benzamide
pdb|3AE4|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-Methyl-Benzamide
pdb|3AE5|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Methyl-N-(3-Isopropoxy-Phenyl)-Benzamide
pdb|3AE6|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With N-(3-Isopropoxy-Phenyl)-Phthalamicacid
pdb|3AE7|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-(3-Isopropoxy-Phenyl)-Benzamide
pdb|3AE8|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Isopropoxy-Phenyl)-2-Trifluoromethylbenzamide
pdb|3AE9|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Pentafluorophenyloxy-Phenyl)-2-Trifluoromethyl-
Benzamide
pdb|3AEA|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Dimethylaminomethyl-Phenyl)-2-Trifluoromethyl-
Benzamide
pdb|3AEB|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Phenoxy-Phenyl)-2-Trifluoromethyl-Benzamide
pdb|3AEC|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-(1-Methylethyl)-Benzamid
pdb|3AED|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-Phenyl-Benzamide
pdb|3AEE|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With Atpenin A5
pdb|3AEF|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii With An Empty Quinone-Binding Pocket
pdb|3AEG|A Chain A, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With N-Biphenyl-3-Yl-2-Iodo-Benzamide
pdb|3SFD|A Chain A, Crystal Structure Of Porcine Mitochondrial Respiratory
Complex Ii Bound With Oxaloacetate And Pentachlorophenol
pdb|3SFE|A Chain A, Crystal Structure Of Porcine Mitochondrial Respiratory
Complex Ii Bound With Oxaloacetate And Thiabendazole
Length = 622
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 92 YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKR--VDRHAEKYVR 149
+P I+ GC++ E C GE + E MER P+ + + R V R +R
Sbjct: 254 HPTGIYGAGCLITEGCRGEGGILINSQGERF--MER-YAPVAKDLASRDVVSRSMTLEIR 310
Query: 150 RGRLDWPE 157
GR PE
Sbjct: 311 EGRGCGPE 318
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 22/123 (17%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ DL +H DL NVL+ S+ KV D+ S D P ++ +T
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD-------PDAAXT------TTG 213
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
+ P + + APE I ++ D+WS G ++ E L GE + N + ++
Sbjct: 214 GKIPIR--------WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS 265
Query: 124 MME 126
+E
Sbjct: 266 SVE 268
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 29/51 (56%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 52
A + H D++P NV++ + ++ ++ D+ S + TP+D S+ + +S
Sbjct: 352 LAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQS 402
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 29/51 (56%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 52
A + H D++P NV++ + ++ ++ D+ S + TP+D S+ + +S
Sbjct: 352 LAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQS 402
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 163 LSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------- 211
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ R + +PE I +T D+WS G +L E+ +
Sbjct: 212 -----------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 163 LSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------- 211
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ R + +PE I +T D+WS G +L E+ +
Sbjct: 212 -----------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +++ D+ + D + Y +
Sbjct: 179 IHRDLAARNVLVTENNVMRIADFGLAR---------------------DINNIDYYKKTT 217
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G ++ E+ T
Sbjct: 218 NGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 29/51 (56%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 52
A + H D++P NV++ + ++ ++ D+ S + TP+D S+ + +S
Sbjct: 352 LAALEKKGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQS 402
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 22/99 (22%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
M+H +L NVLL S ++V D+ + P D + IK + S + +
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK-- 193
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+T+ D+WS G + EL T
Sbjct: 194 --------------------YTHQSDVWSYGVTVWELMT 212
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 79 YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 127
+ APE I +T D+WS G +L+E+ T G + N E + +ER
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 384
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 23/98 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL+ NVL+ S K+ D+ + +D+ Y R IK
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIK-------------- 175
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE I +T ++WS G +L E+ T
Sbjct: 176 --------WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------- 211
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ R + +PE I +T D+WS G +L E+ +
Sbjct: 212 -----------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------- 211
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ R + +PE I +T D+WS G +L E+ +
Sbjct: 212 -----------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------- 211
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ R + +PE I +T D+WS G +L E+ +
Sbjct: 212 -----------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 22/99 (22%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
M+H +L NVLL S ++V D+ + P D + IK + S + +
Sbjct: 154 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK-- 211
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+T+ D+WS G + EL T
Sbjct: 212 --------------------YTHQSDVWSYGVTVWELMT 230
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 161 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------- 209
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ R + +PE I +T D+WS G +L E+ +
Sbjct: 210 -----------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------- 211
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ R + +PE I +T D+WS G +L E+ +
Sbjct: 212 -----------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 51 KSSAIKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILV 104
++ +K+ DFG S Y + D N + R + PE I +T D+W+ G +L
Sbjct: 209 ENMVVKIADFGLSRNIYSADYYKADGNDAIPIR-WMPPESIFYNRYTTESDVWAYGVVLW 267
Query: 105 EL 106
E+
Sbjct: 268 EI 269
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------- 211
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ R + +PE I +T D+WS G +L E+ +
Sbjct: 212 -----------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 134 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------- 182
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ R + +PE I +T D+WS G +L E+ +
Sbjct: 183 -----------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 134 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------- 182
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ R + +PE I +T D+WS G +L E+ +
Sbjct: 183 -----------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 31/153 (20%)
Query: 10 MIHTDLKPENVLLVSSE----YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
++H ++KP N++ V E K+ D+ ++ D + V +G+ Y
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF-----------VXLYGTEEY 181
Query: 66 ERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN-LEHL 122
PD + ++ H + + D+WS+G TG F+ E +
Sbjct: 182 LHPDMYERAVLRKDHQKK--------YGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK 233
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW 155
+M +++ P + V + G +DW
Sbjct: 234 EVMYKIITGKPSGAISGVQK-----AENGPIDW 261
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ S L +++Y R K
Sbjct: 151 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------- 199
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ R + +PE I +T D+WS G +L E+ +
Sbjct: 200 -----------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A + + +IH DL N L+ ++ IKV DFG
Sbjct: 117 AYLEEASVIHRDLAARNCLV---------------------------GENQVIKVSDFGM 149
Query: 63 TTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 116
T + DQ Y ST + +PEV ++ D+WS G ++ E+ + G+ ++
Sbjct: 150 TRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 208
Query: 117 ENLE 120
N E
Sbjct: 209 SNSE 212
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 49 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ + + KV DFG T Q+ + APE + ++ D+WS G +L E+
Sbjct: 141 VSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 40/113 (35%), Gaps = 24/113 (21%)
Query: 6 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
H + + H DLK EN LL S P K SS PK +
Sbjct: 132 HAMQVCHRDLKLENTLLDGS---PAPRLKICAFGYSKSSVLHSQPKDT------------ 176
Query: 66 ERPDQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 117
V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 177 --------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 52/127 (40%), Gaps = 30/127 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D+ +H DL N+L+ S+ KV D+ S +VI+
Sbjct: 161 LADMGYVHRDLAARNILVNSNLVCKVSDFGLS-------------------RVIE----- 196
Query: 65 YERPDQNYIVSTR----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL 119
+ P+ Y + + APE I +T D+WS G ++ E+ + GE + N
Sbjct: 197 -DDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ 255
Query: 120 EHLAMME 126
+ + +E
Sbjct: 256 DVIKAIE 262
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +K+ D+ + +D + K++ ++
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLA----RDINNIDXXKKTTNGRL------------- 221
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + +T+ D+WS G ++ E+ T
Sbjct: 222 -----PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ + +K+ D+ + +D + K++ ++
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLA----RDINNIDXXKKTTNGRL------------- 221
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + +T+ D+WS G ++ E+ T
Sbjct: 222 -----PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 29/108 (26%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ ++ +H DL N+L+ S+ KV D+ S +V++
Sbjct: 163 LANMNYVHRDLAARNILVNSNLVCKVSDFGLS-------------------RVLE----- 198
Query: 65 YERPDQNYIVSTR----HYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ P+ Y S + APE I +T D+WS G ++ E+ T
Sbjct: 199 -DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ +K+ D+ + +D + K++ ++
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLA----RDIHHIDXXKKTTNGRL------------- 214
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE + +T+ D+WS G +L E+ T
Sbjct: 215 -----PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ +K+ D+ + D Y +
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLAR---------------------DIHHIDYYKKTT 210
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G +L E+ T
Sbjct: 211 NGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ +K+ D+ + D Y +
Sbjct: 157 IHRDLAARNVLVTEDNVMKIADFGLAR---------------------DIHHIDYYKKTT 195
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G +L E+ T
Sbjct: 196 NGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ +K+ D+ + D Y +
Sbjct: 165 IHRDLAARNVLVTEDNVMKIADFGLAR---------------------DIHHIDYYKKTT 203
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G +L E+ T
Sbjct: 204 NGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ +K+ D+ + D Y +
Sbjct: 164 IHRDLAARNVLVTEDNVMKIADFGLAR---------------------DIHHIDYYKKTT 202
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G +L E+ T
Sbjct: 203 NGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ +K+ D+ + D Y +
Sbjct: 161 IHRDLAARNVLVTEDNVMKIADFGLAR---------------------DIHHIDYYKKTT 199
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G +L E+ T
Sbjct: 200 NGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 31/153 (20%)
Query: 10 MIHTDLKPENVLLVSSE----YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
++H ++KP N++ V E K+ D+ ++ D + V +G+ Y
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF-----------VSLYGTEEY 181
Query: 66 ERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN-LEHL 122
PD + ++ H + + D+WS+G TG F+ E +
Sbjct: 182 LHPDMYERAVLRKDHQKK--------YGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK 233
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW 155
+M +++ P + V + G +DW
Sbjct: 234 EVMYKIITGKPSGAISGVQK-----AENGPIDW 261
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ +K+ D+ + D Y +
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLAR---------------------DIHHIDYYKKTT 210
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G +L E+ T
Sbjct: 211 NGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ +K+ D+ + D Y +
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLAR---------------------DIHHIDYYKKTT 210
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G +L E+ T
Sbjct: 211 NGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 22/99 (22%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DL NVL+ S ++K+ D+ + D ++ + + P
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK--------------EYNADGGKMPI 183
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ + HYR +T+ D+WS G + EL T
Sbjct: 184 KWMALECIHYRK--------FTHQSDVWSYGVTIWELMT 214
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 62
+ D+ +H DL N+L+ S+ KV D+ + L +++Y R K
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGK----------- 211
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ R + +PE I +T D+WS G +L E+ +
Sbjct: 212 -----------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 22/98 (22%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL NVL+ +K+ D+ + D Y +
Sbjct: 213 IHRDLAARNVLVTEDNVMKIADFGLAR---------------------DIHHIDYYKKTT 251
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
N + + + APE + +T+ D+WS G +L E+ T
Sbjct: 252 NGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 22/99 (22%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DL NVL+ S ++K+ D+ + D ++ + + P
Sbjct: 161 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK--------------EYNADGGKMPI 206
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ + HYR +T+ D+WS G + EL T
Sbjct: 207 KWMALECIHYRK--------FTHQSDVWSYGVTIWELMT 237
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 33/110 (30%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D+ +H DL N+L+ S+ KV D+ G
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFG-------------------------LGRVL 197
Query: 65 YERPDQNYIVSTR------HYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ P+ Y +TR + +PE I +T D+WS G +L E+ +
Sbjct: 198 EDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 25/113 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H +IH D+K N+LL + K+ D+ S T D ++ + K
Sbjct: 155 LHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK------------ 202
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQT 115
T Y PE + T D++S G +L E LC A+ Q+
Sbjct: 203 -----------GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 15/89 (16%)
Query: 55 IKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+KV DFG TY P + APE + ++ D+W+ G +L E+ T
Sbjct: 152 VKVADFGLSRLMTGDTYTAPAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
Query: 109 -------GEALFQTHENLEHLAMMERVLG 130
G L Q +E LE MER G
Sbjct: 210 YGMSPYPGIDLSQVYELLEKDYRMERPEG 238
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 15/89 (16%)
Query: 55 IKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+KV DFG TY P + APE + ++ D+W+ G +L E+ T
Sbjct: 151 VKVADFGLSRLMTGDTYTAPAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
Query: 109 -------GEALFQTHENLEHLAMMERVLG 130
G L Q +E LE MER G
Sbjct: 209 YGMSPYPGIDLSQVYELLEKDYRMERPEG 237
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 54 AIKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 107
+K+ DFG T Y R ++ R + +PE + +T D+WS G +L E+
Sbjct: 163 TVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
Query: 108 T-GEALFQTHENLEHLA-MMERVLGPLPQH---MLKRVDRHAEKYVRRGRLDWPEGAASR 162
T E +Q N + L +ME L P + ML + R +Y + R P
Sbjct: 222 TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMR---PSFLEII 278
Query: 163 ESIKSVMKLPRLQVPFFY 180
SIK M+ +V F+Y
Sbjct: 279 SSIKEEMEPGFREVSFYY 296
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 49 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ + + KV DFG T Q+ + APE + ++ D+WS G +L E+
Sbjct: 135 VSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 55 IKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+K+ DFG T Y R ++ R + +PE + +T D+WS G +L E+ T
Sbjct: 171 VKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
Query: 109 -GEALFQTHENLEHLA-MMERVLGPLPQH---MLKRVDRHAEKYVRRGRLDWPEGAASRE 163
E +Q N + L +ME L P + ML + R +Y + R + E +
Sbjct: 230 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS--- 286
Query: 164 SIKSVMKLPRLQVPFFY 180
SIK M+ +V F+Y
Sbjct: 287 SIKEEMEPGFREVSFYY 303
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 15/137 (10%)
Query: 55 IKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+K+ DFG T Y R ++ R + +PE + +T D+WS G +L E+ T
Sbjct: 168 VKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
Query: 109 -GEALFQTHENLEHLA-MMERVLGPLPQH---MLKRVDRHAEKYVRRGRLDWPEGAASRE 163
E +Q N + L +ME L P + ML + R +Y + R P
Sbjct: 227 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMR---PSFLEIIS 283
Query: 164 SIKSVMKLPRLQVPFFY 180
SIK M+ +V F+Y
Sbjct: 284 SIKEEMEPGFREVSFYY 300
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 49 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ + + KV DFG T Q+ + APE + ++ D+WS G +L E+
Sbjct: 150 VSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 54 AIKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 107
+K+ DFG T Y R ++ R + +PE + +T D+WS G +L E+
Sbjct: 198 TVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIA 256
Query: 108 T-GEALFQTHENLEHLA-MMERVLGPLPQH---MLKRVDRHAEKYVRRGRLDWPEGAASR 162
T E +Q N + L +ME L P + ML + R +Y + R + E +
Sbjct: 257 TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS-- 314
Query: 163 ESIKSVMKLPRLQVPFFY 180
SIK M+ +V F+Y
Sbjct: 315 -SIKEEMEPGFREVSFYY 331
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 15/137 (10%)
Query: 55 IKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+K+ DFG T Y R ++ R + +PE + +T D+WS G +L E+ T
Sbjct: 167 VKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
Query: 109 -GEALFQTHENLEHLA-MMERVLGPLPQH---MLKRVDRHAEKYVRRGRLDWPEGAASRE 163
E +Q N + L +ME L P + ML + R +Y + R P
Sbjct: 226 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMR---PSFLEIIS 282
Query: 164 SIKSVMKLPRLQVPFFY 180
SIK M+ +V F+Y
Sbjct: 283 SIKEEMEPGFREVSFYY 299
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 181
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 182 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 233
Query: 124 MMERVLG 130
MER G
Sbjct: 234 RMERPEG 240
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 177
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 178 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 124 MMERVLG 130
MER G
Sbjct: 230 RMERPEG 236
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 182
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 183 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
Query: 124 MMERVLG 130
MER G
Sbjct: 235 RMERPEG 241
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 182
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 183 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
Query: 124 MMERVLG 130
MER G
Sbjct: 235 RMERPEG 241
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 177
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 178 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 124 MMERVLG 130
MER G
Sbjct: 230 RMERPEG 236
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 24/105 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY-KSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+ D ++H DL NVL+ + +++K+ D+ ++ L ++ Y K
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI--------- 185
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 186 --------------KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 19/91 (20%)
Query: 55 IKVIDFGSTTYERPDQNYIVSTRH--------YRAPEVILGLGWTYPCDIWSVGCILVEL 106
+KV DFG + D T H + APE + ++ D+W+ G +L E+
Sbjct: 155 VKVADFGLSRLMTGD----TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 107 CT-------GEALFQTHENLEHLAMMERVLG 130
T G L Q +E LE MER G
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 24/105 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY-KSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+ D ++H DL NVL+ + +++K+ D+ ++ L ++ Y K
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI--------- 185
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 186 --------------KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 55 IKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+K+ DFG T Y R ++ R + +PE + +T D+WS G +L E+ T
Sbjct: 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
Query: 109 -GEALFQTHENLEHLA-MMERVLGPLPQH---MLKRVDRHAEKYVRRGRLDWPEGAASRE 163
E +Q N + L +ME L P + ML + R +Y + R + E +
Sbjct: 236 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS--- 292
Query: 164 SIKSVMKLPRLQVPFFY 180
SIK M+ +V F+Y
Sbjct: 293 SIKEEMEPGFREVSFYY 309
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 15/137 (10%)
Query: 55 IKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+K+ DFG T Y R ++ R + +PE + +T D+WS G +L E+ T
Sbjct: 170 VKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
Query: 109 -GEALFQTHENLEHLA-MMERVLGPLPQH---MLKRVDRHAEKYVRRGRLDWPEGAASRE 163
E +Q N + L +ME L P + ML + R +Y + R P
Sbjct: 229 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMR---PSFLEIIS 285
Query: 164 SIKSVMKLPRLQVPFFY 180
SIK M+ +V F+Y
Sbjct: 286 SIKEEMEPGFREVSFYY 302
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 55 IKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+K+ DFG T Y R ++ R + +PE + +T D+WS G +L E+ T
Sbjct: 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
Query: 109 -GEALFQTHENLEHLA-MMERVLGPLPQH---MLKRVDRHAEKYVRRGRLDWPEGAASRE 163
E +Q N + L +ME L P + ML + R +Y + R + E +
Sbjct: 236 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS--- 292
Query: 164 SIKSVMKLPRLQVPFFY 180
SIK M+ +V F+Y
Sbjct: 293 SIKEEMEPGFREVSFYY 309
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 190
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 191 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 242
Query: 124 MMERVLG 130
MER G
Sbjct: 243 RMERPEG 249
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 177
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 178 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 124 MMERVLG 130
MER G
Sbjct: 230 RMERPEG 236
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 182
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 183 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
Query: 124 MMERVLG 130
MER G
Sbjct: 235 RMERPEG 241
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 182
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 183 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
Query: 124 MMERVLG 130
MER G
Sbjct: 235 RMERPEG 241
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 177
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 178 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 124 MMERVLG 130
MER G
Sbjct: 230 RMERPEG 236
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 15/137 (10%)
Query: 55 IKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+K+ DFG T Y R ++ R + +PE + +T D+WS G +L E+ T
Sbjct: 170 VKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
Query: 109 -GEALFQTHENLEHLA-MMERVLGPLPQH---MLKRVDRHAEKYVRRGRLDWPEGAASRE 163
E +Q N + L +ME L P + ML + R +Y + R P
Sbjct: 229 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMR---PSFLEIIS 285
Query: 164 SIKSVMKLPRLQVPFFY 180
SIK M+ +V F+Y
Sbjct: 286 SIKEEMEPGFREVSFYY 302
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 19/91 (20%)
Query: 55 IKVIDFGSTTYERPDQNYIVSTRH--------YRAPEVILGLGWTYPCDIWSVGCILVEL 106
+KV DFG + D T H + APE + ++ D+W+ G +L E+
Sbjct: 151 VKVADFGLSRLMTGD----TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 107 CT-------GEALFQTHENLEHLAMMERVLG 130
T G L Q +E LE MER G
Sbjct: 207 ATYGMSPYPGIDLSQVYELLEKDYRMERPEG 237
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 24/105 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY-KSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+ D ++H DL NVL+ + +++K+ D+ ++ L ++ Y K
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI--------- 185
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 186 --------------KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 54 AIKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 107
+K+ DFG T Y R ++ R + +PE + +T D+WS G +L E+
Sbjct: 163 TVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
Query: 108 T-GEALFQTHENLEHLA-MMERVLGPLPQH---MLKRVDRHAEKYVRRGRLDWPEGAASR 162
T E +Q N + L +ME L P + ML + R +Y + R + E +
Sbjct: 222 TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS-- 279
Query: 163 ESIKSVMKLPRLQVPFFY 180
SIK M+ +V F+Y
Sbjct: 280 -SIKEEMEPGFREVSFYY 296
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 177
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 178 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 124 MMERVLG 130
MER G
Sbjct: 230 RMERPEG 236
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 179
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 180 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 231
Query: 124 MMERVLG 130
MER G
Sbjct: 232 RMERPEG 238
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 24/105 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY-KSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+ D ++H DL NVL+ + +++K+ D+ ++ L ++ Y K
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI--------- 187
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 188 --------------KWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 24/105 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY-KSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+ D ++H DL NVL+ + +++K+ D+ ++ L ++ Y K
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI--------- 190
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 191 --------------KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 49 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
+ + + KV DFG T Q+ + APE + ++ D+WS G +L E+
Sbjct: 322 VSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 177
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 178 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 124 MMERVLG 130
MER G
Sbjct: 230 RMERPEG 236
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 30/127 (23%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
IH DL N L+ + +KV D+ S D+ Y IK
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK-------------- 179
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLA 123
+ APE + ++ D+W+ G +L E+ T G L Q +E LE
Sbjct: 180 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 231
Query: 124 MMERVLG 130
MER G
Sbjct: 232 RMERPEG 238
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 24/105 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDY-KSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+ D ++H DL NVL+ + +++K+ D+ ++ L ++ Y K
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI--------- 183
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 184 --------------KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H D+ N+L+ S E +K+ D+ S + +D Y+K IK
Sbjct: 126 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIK----- 179
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ +PE I +T D+W + E+ + G+ F EN +
Sbjct: 180 -----------------WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 222
Query: 121 HLAMMER 127
+ ++E+
Sbjct: 223 VIGVLEK 229
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
A + + +H D+ N+L+ S E +K+ D+ S + +D Y+K IK
Sbjct: 138 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIK----- 191
Query: 62 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
+ +PE I +T D+W + E+ + G+ F EN +
Sbjct: 192 -----------------WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 234
Query: 121 HLAMMER 127
+ ++E+
Sbjct: 235 VIGVLEK 241
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 24/126 (19%)
Query: 3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
A + + +H D+ N+L+ S E +K+ D+ S + +D Y+K IK
Sbjct: 123 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIK------ 175
Query: 63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 121
+ +PE I +T D+W + E+ + G+ F EN +
Sbjct: 176 ----------------WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 219
Query: 122 LAMMER 127
+ ++E+
Sbjct: 220 IGVLEK 225
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 19/91 (20%)
Query: 55 IKVIDFGSTTYERPDQNYIVSTRH--------YRAPEVILGLGWTYPCDIWSVGCILVEL 106
+KV DFG + D T H + APE + ++ D+W+ G +L E+
Sbjct: 396 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
Query: 107 CT-------GEALFQTHENLEHLAMMERVLG 130
T G L Q +E LE MER G
Sbjct: 452 ATYGMSPYPGIDLSQVYELLEKDYRMERPEG 482
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 24/114 (21%)
Query: 4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+H H DLKP N+LL + D S + + A+ + D+ +
Sbjct: 149 AIHAKGYAHRDLKPTNILLGDEGQPVLMDLGS-----MNQACIHVEGSRQALTLQDWAAQ 203
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPC------DIWSVGCILVELCTGEA 111
T YRAPE+ C D+WS+GC+L + GE
Sbjct: 204 R----------CTISYRAPEL---FSVQSHCVIDERTDVWSLGCVLYAMMFGEG 244
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 174 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 216
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 19/91 (20%)
Query: 55 IKVIDFGSTTYERPDQNYIVSTRH--------YRAPEVILGLGWTYPCDIWSVGCILVEL 106
+KV DFG + D T H + APE + ++ D+W+ G +L E+
Sbjct: 357 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 107 CT-------GEALFQTHENLEHLAMMERVLG 130
T G L Q +E LE MER G
Sbjct: 413 ATYGMSPYPGIDLSQVYELLEKDYRMERPEG 443
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 19/91 (20%)
Query: 55 IKVIDFGSTTYERPDQNYIVSTRH--------YRAPEVILGLGWTYPCDIWSVGCILVEL 106
+KV DFG + D T H + APE + ++ D+W+ G +L E+
Sbjct: 354 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
Query: 107 CT-------GEALFQTHENLEHLAMMERVLG 130
T G L Q +E LE MER G
Sbjct: 410 ATYGMSPYPGIDLSQVYELLEKDYRMERPEG 440
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 23/112 (20%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH D+K N+LL + K+ D+ S K + G T
Sbjct: 155 LHTRAIIHRDVKSINILLDENFVPKITDFGISK------------------KGTELGQTH 196
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQT 115
+ T Y PE + T D++S G +L E LC A+ Q+
Sbjct: 197 L----XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 37/100 (37%), Gaps = 25/100 (25%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 68
+H DL NVL+ S +K+ D+ ++ T K+ K S
Sbjct: 136 VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF------------- 182
Query: 69 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE ++ + D+WS G L EL T
Sbjct: 183 ----------WYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 154 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 200
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 201 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 243
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+H +IH D+KP N+L+ +IK+ D+ S+ FK S A+ G+
Sbjct: 153 LHYQKIIHRDIKPSNLLVGEDGHIKIADFGV-------SNEFK---GSDALLSNTVGTPA 202
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
+ P+ + TR + + + D+W++G L G+ F
Sbjct: 203 FMAPES--LSETRKIFSGKAL---------DVWAMGVTLYCFVFGQCPF 240
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 179 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 225
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 226 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 268
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 130 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 176
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 177 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 219
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 37/100 (37%), Gaps = 25/100 (25%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 68
+H DL NVL+ S +K+ D+ ++ T K+ K S
Sbjct: 148 VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF------------- 194
Query: 69 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ APE ++ + D+WS G L EL T
Sbjct: 195 ----------WYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 220
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 221 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 263
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 166 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 212
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 213 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 255
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 174 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 173
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 174 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 216
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 205
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 206 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 248
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 193
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 194 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 236
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 193
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 194 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 236
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 220
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 221 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 263
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 206
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 207 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 179 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 221
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 205
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 206 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 248
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 205
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 206 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 248
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 177
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 178 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 220
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 179 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 221
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 205
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 206 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 192
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 193 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 235
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 206
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 207 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 206
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 207 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 193
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 194 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 236
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 220
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 221 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 263
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 192
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 193 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 235
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 24/117 (20%)
Query: 11 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
+H D+ NVL+ S++ +K+ D+ S + +DS+ K IK
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPIK-------------- 177
Query: 71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVG-CILVELCTGEALFQTHENLEHLAMME 126
+ APE I +T D+W G C+ L G FQ +N + + +E
Sbjct: 178 --------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 177
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 178 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 220
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 206
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 207 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 6 HDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
H+ ++H D+K EN+L+ ++ +K+ D+ S KD+ Y DF T
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTR 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
P + H R+ V WS+G +L ++ G+ F+ E +
Sbjct: 179 VYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 24/105 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+ D ++H DL NVL+ + +++K+ D+ + L ++ Y K
Sbjct: 167 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI--------- 217
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 218 --------------KWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 187
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 188 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 22/97 (22%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DL NVL+ +K+ D F+ + + K++
Sbjct: 166 VVHKDLATRNVLVYDKLNVKISDL----------GLFREVYAADYYKLLG---------- 205
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
N ++ R + APE I+ ++ DIWS G +L E+
Sbjct: 206 -NSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
++ L++ LL+ +PT R+T E + HP+ +
Sbjct: 232 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 262
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 194
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 195 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 190
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 191 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 22/97 (22%)
Query: 10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
++H DL NVL+ +K+ D F+ + + K++
Sbjct: 149 VVHKDLATRNVLVYDKLNVKISDL----------GLFREVYAADYYKLLG---------- 188
Query: 70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
N ++ R + APE I+ ++ DIWS G +L E+
Sbjct: 189 -NSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 186 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 185 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 191
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 192 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 181
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 182 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 186
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 187 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 187
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 188 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 185 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 24/105 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+ D ++H DL NVL+ + +++K+ D+ + L ++ Y K
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI--------- 190
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 191 --------------KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 187
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 188 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 186
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 187 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 209
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 210 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 191
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 192 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 185
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 186 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 185 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 178
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 179 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 187
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 188 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 184
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 185 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 24/105 (22%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
+ D ++H DL NVL+ + +++K+ D+ + L ++ Y K
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI--------- 183
Query: 64 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 184 --------------KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
+ D ++H DL NVL+ + +++K+ D+ + + + IK
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------- 188
Query: 65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
+ A E IL +T+ D+WS G + EL T
Sbjct: 189 --------------WMALESILHRIYTHQSDVWSYGVTVWELMT 218
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.139 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,687,418
Number of Sequences: 62578
Number of extensions: 302017
Number of successful extensions: 3481
Number of sequences better than 100.0: 990
Number of HSP's better than 100.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 1149
Number of HSP's gapped (non-prelim): 1742
length of query: 252
length of database: 14,973,337
effective HSP length: 97
effective length of query: 155
effective length of database: 8,903,271
effective search space: 1380007005
effective search space used: 1380007005
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)