Your job contains 1 sequence.
>025472
MIVSYWGVEAPKVNKDDGSEWKWNCFRPWEAYEADLSIDLKKHHAPTTFSDKMALWTVKS
LRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENE
RMHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTE
FLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYASDIHYQGR
QLRESPAPLGYH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025472
(252 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087807 - symbol:AOX1A "alternative oxidase 1A... 1245 8.7e-127 1
TAIR|locus:2087882 - symbol:AOX1B "alternative oxidase 1B... 1219 4.9e-124 1
UNIPROTKB|Q07185 - symbol:AOX1 "Ubiquinol oxidase 1, mito... 1200 5.1e-122 1
TAIR|locus:2089124 - symbol:AOX1C "alternative oxidase 1C... 1190 5.8e-121 1
UNIPROTKB|Q8W855 - symbol:AOX1c "Alternative oxidase" spe... 1109 2.2e-112 1
TAIR|locus:2028311 - symbol:AOX1D "alternative oxidase 1D... 1051 3.1e-106 1
TAIR|locus:2173353 - symbol:AOX2 "alternative oxidase 2" ... 1047 8.3e-106 1
ASPGD|ASPL0000047182 - symbol:AN2099 species:162425 "Emer... 494 6.8e-51 2
UNIPROTKB|O93788 - symbol:AOX1 "Alternative oxidase, mito... 457 1.4e-46 2
DICTYBASE|DDB_G0280819 - symbol:aoxA species:44689 "Dicty... 487 1.8e-46 1
CGD|CAL0004550 - symbol:AOX1 species:5476 "Candida albica... 435 5.9e-41 1
UNIPROTKB|Q5APJ1 - symbol:AOX1 "Alternative oxidase" spec... 435 5.9e-41 1
CGD|CAL0004548 - symbol:AOX2 species:5476 "Candida albica... 427 4.2e-40 1
UNIPROTKB|Q5APJ2 - symbol:AOX2 "Alternative oxidase" spec... 427 4.2e-40 1
TAIR|locus:2005514 - symbol:IM "IMMUTANS" species:3702 "A... 153 8.5e-10 2
>TAIR|locus:2087807 [details] [associations]
symbol:AOX1A "alternative oxidase 1A" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0005740 "mitochondrial envelope"
evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0009916 "alternative oxidase activity"
evidence=IGI;ISS;IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA;TAS] [GO:0045333 "cellular respiration" evidence=IDA]
[GO:0009409 "response to cold" evidence=IMP] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IEP]
InterPro:IPR002680 Pfam:PF01786 PIRSF:PIRSF005229 GO:GO:0016021
GO:GO:0005739 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005743
GO:GO:0046872 GO:GO:0009409 GO:GO:0022900 GO:GO:0031930
GO:GO:0007585 GO:GO:0070469 GO:GO:0045333 KO:K00540 EMBL:D89875
EMBL:AJ131392 EMBL:AB022215 EMBL:AF370166 EMBL:AY059128 EMBL:M96417
EMBL:U85244 IPI:IPI00517055 IPI:IPI00546366 PIR:A46364 PIR:T51615
RefSeq:NP_188876.1 UniGene:At.23475 STRING:Q39219 PaxDb:Q39219
PRIDE:Q39219 EnsemblPlants:AT3G22370.1 GeneID:821806
KEGG:ath:AT3G22370 GeneFarm:1749 TAIR:At3g22370 eggNOG:NOG80852
HOGENOM:HOG000178442 InParanoid:Q39219 OMA:YWRLPAN PhylomeDB:Q39219
ProtClustDB:PLN02478 BioCyc:MetaCyc:AT3G22370-MONOMER
Genevestigator:Q39219 GermOnline:AT3G22370 GO:GO:0009916
Uniprot:Q39219
Length = 354
Score = 1245 (443.3 bits), Expect = 8.7e-127, P = 8.7e-127
Identities = 222/251 (88%), Positives = 238/251 (94%)
Query: 2 IVSYWGVEAPKVNKDDGSEWKWNCFRPWEAYEADLSIDLKKHHAPTTFSDKMALWTVKSL 61
I SYWGVE K+ K+DGSEWKWNCFRPWE Y+AD++IDLKKHH PTTF D++A WTVKSL
Sbjct: 104 IASYWGVEPNKITKEDGSEWKWNCFRPWETYKADITIDLKKHHVPTTFLDRIAYWTVKSL 163
Query: 62 RWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENER 121
RWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFE SGGWIKALLEEAENER
Sbjct: 164 RWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEQSGGWIKALLEEAENER 223
Query: 122 MHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEF 181
MHLMTFMEVAKPKWYERALV VQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEF
Sbjct: 224 MHLMTFMEVAKPKWYERALVITVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEF 283
Query: 182 LKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYASDIHYQGRQ 241
LKELDKGNIENVPAPAIA DYWRLP ++TL+DVV+VVRADEAHHRDVNH+ASDIHYQGR+
Sbjct: 284 LKELDKGNIENVPAPAIAIDYWRLPADATLRDVVMVVRADEAHHRDVNHFASDIHYQGRE 343
Query: 242 LRESPAPLGYH 252
L+E+PAP+GYH
Sbjct: 344 LKEAPAPIGYH 354
>TAIR|locus:2087882 [details] [associations]
symbol:AOX1B "alternative oxidase 1B" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0005740 "mitochondrial envelope"
evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0009916 "alternative oxidase activity"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA;TAS] InterPro:IPR002680 Pfam:PF01786 PIRSF:PIRSF005229
GO:GO:0016021 GO:GO:0005739 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0022900 GO:GO:0007585
GO:GO:0070469 KO:K00540 EMBL:D89875 EMBL:AB022215 eggNOG:NOG80852
HOGENOM:HOG000178442 ProtClustDB:PLN02478 GO:GO:0009916
EMBL:DQ056603 IPI:IPI00529811 RefSeq:NP_188875.1 UniGene:At.53438
STRING:O23913 PaxDb:O23913 PRIDE:O23913 EnsemblPlants:AT3G22360.1
GeneID:821805 KEGG:ath:AT3G22360 GeneFarm:1750 TAIR:At3g22360
InParanoid:O23913 OMA:VPTDIFF PhylomeDB:O23913
Genevestigator:O23913 GermOnline:AT3G22360 Uniprot:O23913
Length = 325
Score = 1219 (434.2 bits), Expect = 4.9e-124, P = 4.9e-124
Identities = 216/252 (85%), Positives = 237/252 (94%)
Query: 1 MIVSYWGVEAPKVNKDDGSEWKWNCFRPWEAYEADLSIDLKKHHAPTTFSDKMALWTVKS 60
+IVSYWGV+ K+ K+DG+EWKW+CFRPWE Y++DL+IDLKKHH P+T DK+A WTVKS
Sbjct: 74 LIVSYWGVKPMKITKEDGTEWKWSCFRPWETYKSDLTIDLKKHHVPSTLPDKLAYWTVKS 133
Query: 61 LRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENE 120
LRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGML+HCKSLRRFE SGGWIKALLEEAENE
Sbjct: 134 LRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLVHCKSLRRFEQSGGWIKALLEEAENE 193
Query: 121 RMHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTE 180
RMHLMTFMEVAKP WYERALV AVQG+FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTE
Sbjct: 194 RMHLMTFMEVAKPNWYERALVIAVQGIFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTE 253
Query: 181 FLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYASDIHYQGR 240
FLKELD GNIENVPAPAIA DYWRL ++TL+DVV+VVRADEAHHRDVNHYASDIHYQGR
Sbjct: 254 FLKELDNGNIENVPAPAIAIDYWRLEADATLRDVVMVVRADEAHHRDVNHYASDIHYQGR 313
Query: 241 QLRESPAPLGYH 252
+L+E+PAP+GYH
Sbjct: 314 ELKEAPAPIGYH 325
>UNIPROTKB|Q07185 [details] [associations]
symbol:AOX1 "Ubiquinol oxidase 1, mitochondrial"
species:3847 "Glycine max" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002680 Pfam:PF01786 PIRSF:PIRSF005229
GO:GO:0016021 GO:GO:0005743 GO:GO:0046872 GO:GO:0022900
GO:GO:0007585 GO:GO:0070469 GO:GO:0009916 EMBL:X68702 EMBL:S81466
RefSeq:NP_001236166.1 UniGene:Gma.8204 IntAct:Q07185 GeneID:547924
KEGG:gmx:547924 Genevestigator:Q07185 Uniprot:Q07185
Length = 321
Score = 1200 (427.5 bits), Expect = 5.1e-122, P = 5.1e-122
Identities = 215/252 (85%), Positives = 232/252 (92%)
Query: 1 MIVSYWGVEAPKVNKDDGSEWKWNCFRPWEAYEADLSIDLKKHHAPTTFSDKMALWTVKS 60
+IVSYWG++ K+ K DG+EWKWNCF PW Y+ADLSIDL+KH PTTF DKMA WTVK
Sbjct: 70 VIVSYWGIQPSKITKKDGTEWKWNCFSPWGTYKADLSIDLEKHMPPTTFLDKMAFWTVKV 129
Query: 61 LRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENE 120
LR+PTD+FFQRRYGCRAMMLETVAAVPGMV GMLLHCKSLRRFEHSGGW KALLEEAENE
Sbjct: 130 LRYPTDVFFQRRYGCRAMMLETVAAVPGMVAGMLLHCKSLRRFEHSGGWFKALLEEAENE 189
Query: 121 RMHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTE 180
RMHLMTFMEVAKPKWYERALV VQGVFFNAYFLGYL+SPKFAHRM GYLEEEAIHSYTE
Sbjct: 190 RMHLMTFMEVAKPKWYERALVITVQGVFFNAYFLGYLLSPKFAHRMFGYLEEEAIHSYTE 249
Query: 181 FLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYASDIHYQGR 240
FLKELDKGNIENVPAPAIA DYW+LPP STL+DVV+VVRADEAHHRDVNH+ASDIHYQGR
Sbjct: 250 FLKELDKGNIENVPAPAIAIDYWQLPPGSTLRDVVMVVRADEAHHRDVNHFASDIHYQGR 309
Query: 241 QLRESPAPLGYH 252
+LRE+ AP+GYH
Sbjct: 310 ELREAAAPIGYH 321
>TAIR|locus:2089124 [details] [associations]
symbol:AOX1C "alternative oxidase 1C" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0005740 "mitochondrial envelope"
evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0009916 "alternative oxidase activity"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA;TAS] InterPro:IPR002680 Pfam:PF01786 PIRSF:PIRSF005229
GO:GO:0016021 GO:GO:0005739 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0022900 GO:GO:0007585
GO:GO:0070469 KO:K00540 eggNOG:NOG80852 HOGENOM:HOG000178442
ProtClustDB:PLN02478 GO:GO:0009916 EMBL:AB003175 EMBL:AB018114
EMBL:BT004153 EMBL:BT005467 IPI:IPI00523909 RefSeq:NP_189399.1
UniGene:At.42928 STRING:O22048 PaxDb:O22048
EnsemblPlants:AT3G27620.1 GeneID:822384 KEGG:ath:AT3G27620
GeneFarm:1751 TAIR:At3g27620 InParanoid:O22048 OMA:DIHYQGH
PhylomeDB:O22048 Genevestigator:O22048 GermOnline:AT3G27620
Uniprot:O22048
Length = 329
Score = 1190 (424.0 bits), Expect = 5.8e-121, P = 5.8e-121
Identities = 211/252 (83%), Positives = 234/252 (92%)
Query: 1 MIVSYWGVEAPKVNKDDGSEWKWNCFRPWEAYEADLSIDLKKHHAPTTFSDKMALWTVKS 60
+IVSYWGV+ K+ K+DG+EWKW+CFRPWE Y+ADL+IDLKKHH P+T DK+A W VKS
Sbjct: 78 LIVSYWGVKPMKITKEDGTEWKWSCFRPWETYKADLTIDLKKHHVPSTLPDKIAYWMVKS 137
Query: 61 LRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENE 120
LRWPTDLFFQRRYGCRA+MLETVAAVPGMVGGML+H KSLRRFE SGGWIKALLEEAENE
Sbjct: 138 LRWPTDLFFQRRYGCRAIMLETVAAVPGMVGGMLMHFKSLRRFEQSGGWIKALLEEAENE 197
Query: 121 RMHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTE 180
RMHLMTFMEVAKPKWYERALV +VQGVFFNAY +GY+ISPKFAHRMVGYLEEEAIHSYTE
Sbjct: 198 RMHLMTFMEVAKPKWYERALVISVQGVFFNAYLIGYIISPKFAHRMVGYLEEEAIHSYTE 257
Query: 181 FLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYASDIHYQGR 240
FLKELD GNIENVPAPAIA DYWRL ++TL+DVV+VVRADEAHHRDVNHYASDIHYQG
Sbjct: 258 FLKELDNGNIENVPAPAIAVDYWRLEADATLRDVVMVVRADEAHHRDVNHYASDIHYQGH 317
Query: 241 QLRESPAPLGYH 252
+L+E+PAP+GYH
Sbjct: 318 ELKEAPAPIGYH 329
>UNIPROTKB|Q8W855 [details] [associations]
symbol:AOX1c "Alternative oxidase" species:39947 "Oryza
sativa Japonica Group" [GO:0005739 "mitochondrion" evidence=IC]
InterPro:IPR002680 Pfam:PF01786 PIRSF:PIRSF005229 GO:GO:0016021
GO:GO:0005739 GO:GO:0046872 GO:GO:0022900 GO:GO:0007585
GO:GO:0070469 EMBL:AP008208 ProtClustDB:PLN02478 GO:GO:0009916
OMA:VPTDIFF EMBL:AP003994 EMBL:AP004778 EMBL:AB074004 EMBL:AB074005
RefSeq:NP_001047839.1 UniGene:Os.57772
EnsemblPlants:LOC_Os02g47200.1 GeneID:4330432 KEGG:osa:4330432
Uniprot:Q8W855
Length = 345
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 197/249 (79%), Positives = 220/249 (88%)
Query: 4 SYWGVEAPKVNKDDGSEWKWNCFRPWEAYEADLSIDLKKHHAPTTFSDKMALWTVKSLRW 63
SYWG+EA K+ DG EWKW+CFRPWE Y D +IDLKKHH P DK+A WTVK+LR
Sbjct: 97 SYWGIEASKLASKDGVEWKWSCFRPWETYSPDTTIDLKKHHEPKVLLDKVAYWTVKALRV 156
Query: 64 PTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMH 123
PTD+FFQRRYGCRAMMLETVAAVPGMVGGMLLH +SLRRFEHSGGWI+ALLEEAENERMH
Sbjct: 157 PTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMH 216
Query: 124 LMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLK 183
LMTFMEVAKP+WYERALV AVQGVFFNAYFLGYL+SPK AHR+VGYLEEEAIHSYTE+LK
Sbjct: 217 LMTFMEVAKPRWYERALVLAVQGVFFNAYFLGYLLSPKLAHRVVGYLEEEAIHSYTEYLK 276
Query: 184 ELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYASDIHYQGRQLR 243
+++ G IENVPAP IA DYWRLP +TLKDVV+VVRADEAHHRDVNH+ASD+H+QG L+
Sbjct: 277 DIEAGKIENVPAPPIAIDYWRLPAGATLKDVVVVVRADEAHHRDVNHFASDVHFQGMDLK 336
Query: 244 ESPAPLGYH 252
+ PAPL YH
Sbjct: 337 DIPAPLDYH 345
>TAIR|locus:2028311 [details] [associations]
symbol:AOX1D "alternative oxidase 1D" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0007585 "respiratory gaseous exchange" evidence=IEA]
[GO:0009916 "alternative oxidase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA;TAS]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR002680 Pfam:PF01786 PIRSF:PIRSF005229
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005743
GO:GO:0046872 EMBL:AC007767 GO:GO:0022900 GO:GO:0007585
GO:GO:0070469 eggNOG:NOG80852 HOGENOM:HOG000178442
ProtClustDB:PLN02478 GO:GO:0009916 EMBL:AC084110 EMBL:AY072541
EMBL:AY085459 IPI:IPI00519918 PIR:C86448 RefSeq:NP_564395.1
UniGene:At.40153 STRING:Q8LEE7 PaxDb:Q8LEE7 PRIDE:Q8LEE7
EnsemblPlants:AT1G32350.1 GeneID:840127 KEGG:ath:AT1G32350
GeneFarm:1755 TAIR:At1g32350 InParanoid:Q8LEE7 OMA:HAMLLET
PhylomeDB:Q8LEE7 Genevestigator:Q8LEE7 GermOnline:AT1G32350
Uniprot:Q8LEE7
Length = 318
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 180/252 (71%), Positives = 220/252 (87%)
Query: 1 MIVSYWGVEAPKVNKDDGSEWKWNCFRPWEAYEADLSIDLKKHHAPTTFSDKMALWTVKS 60
+I +YWG+ K+ K DGS WKWNCF+PW++Y+ D+SID+ KHH P+ F+DK A WTV++
Sbjct: 67 VISTYWGIPPTKITKPDGSAWKWNCFQPWDSYKPDVSIDVTKHHKPSNFTDKFAYWTVQT 126
Query: 61 LRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENE 120
L+ P LFFQR++ C AM+LETVAAVPGMVGGMLLH KSLRRFEHSGGWIKALLEEAENE
Sbjct: 127 LKIPVQLFFQRKHMCHAMLLETVAAVPGMVGGMLLHLKSLRRFEHSGGWIKALLEEAENE 186
Query: 121 RMHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTE 180
RMHLMTF+E+++PKWYERA+VF VQGVFFNAYFL Y+ISPK AHR+ GYLEEEA++SYTE
Sbjct: 187 RMHLMTFIELSQPKWYERAIVFTVQGVFFNAYFLAYVISPKLAHRITGYLEEEAVNSYTE 246
Query: 181 FLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYASDIHYQGR 240
FLK++D G EN PAPAIA DYWRLP ++TL+DVV V+RADEAHHRD+NHYASDI ++G
Sbjct: 247 FLKDIDAGKFENSPAPAIAIDYWRLPKDATLRDVVYVIRADEAHHRDINHYASDIQFKGH 306
Query: 241 QLRESPAPLGYH 252
+L+E+PAP+GYH
Sbjct: 307 ELKEAPAPIGYH 318
>TAIR|locus:2173353 [details] [associations]
symbol:AOX2 "alternative oxidase 2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0005740 "mitochondrial envelope"
evidence=IEA;IDA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0009916 "alternative oxidase activity"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA;TAS] [GO:0010230 "alternative respiration"
evidence=ISS] InterPro:IPR002680 Pfam:PF01786 PIRSF:PIRSF005229
GO:GO:0016021 GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0022900 GO:GO:0007585
GO:GO:0070469 EMBL:AB008268 KO:K00540 eggNOG:NOG80852
HOGENOM:HOG000178442 ProtClustDB:PLN02478 GO:GO:0009916
EMBL:AB003176 EMBL:DQ056738 IPI:IPI00542540 RefSeq:NP_201226.2
UniGene:At.55697 STRING:O22049 PaxDb:O22049
EnsemblPlants:AT5G64210.1 GeneID:836542 KEGG:ath:AT5G64210
GeneFarm:1754 TAIR:At5g64210 InParanoid:O22049 OMA:RIPTDIF
PhylomeDB:O22049 Genevestigator:O22049 GermOnline:AT5G64210
GO:GO:0010230 Uniprot:O22049
Length = 353
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 187/253 (73%), Positives = 217/253 (85%)
Query: 2 IVSYWGVEAPK--VNKDDGSEWKWNCFRPWEAYEADLSIDLKKHHAPTTFSDKMALWTVK 59
+ SYWG+E K + + DGS+W WNCF PWE Y+A+LSIDLKKHH P +DK+A VK
Sbjct: 101 VPSYWGIETAKMKITRKDGSDWPWNCFMPWETYQANLSIDLKKHHVPKNIADKVAYRIVK 160
Query: 60 SLRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAEN 119
LR PTD+FFQRRYGCRAMMLETVAAVPGMVGGMLLH KS+R+FEHSGGWIKALLEEAEN
Sbjct: 161 LLRIPTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSIRKFEHSGGWIKALLEEAEN 220
Query: 120 ERMHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYT 179
ERMHLMT ME+ KPKWYER LV VQG+FFN++F+ Y+ISP+ AHR+VGYLEEEAIHSYT
Sbjct: 221 ERMHLMTMMELVKPKWYERLLVMLVQGIFFNSFFVCYVISPRLAHRVVGYLEEEAIHSYT 280
Query: 180 EFLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYASDIHYQG 239
EFLK++D G IENV APAIA DYWRLP ++TLKDVV V+RADEAHHRDVNH+ASDI QG
Sbjct: 281 EFLKDIDNGKIENVAAPAIAIDYWRLPKDATLKDVVTVIRADEAHHRDVNHFASDIRNQG 340
Query: 240 RQLRESPAPLGYH 252
++LRE+ AP+GYH
Sbjct: 341 KELREAAAPIGYH 353
>ASPGD|ASPL0000047182 [details] [associations]
symbol:AN2099 species:162425 "Emericella nidulans"
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009916 "alternative
oxidase activity" evidence=IEA] [GO:0005740 "mitochondrial
envelope" evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0010230 "alternative respiration" evidence=IEA]
[GO:0034599 "cellular response to oxidative stress" evidence=IEA]
InterPro:IPR002680 Pfam:PF01786 PIRSF:PIRSF005229 GO:GO:0016021
GO:GO:0005743 GO:GO:0046872 EMBL:BN001307 GO:GO:0022900
GO:GO:0007585 EMBL:AACD01000032 GO:GO:0070469 eggNOG:NOG80852
HOGENOM:HOG000178442 GO:GO:0009916 EMBL:AB039832 EMBL:AY140654
RefSeq:XP_659703.1 EnsemblFungi:CADANIAT00008772 GeneID:2874947
KEGG:ani:AN2099.2 OMA:VNHTLGN OrthoDB:EOG42NN8B Uniprot:Q9P959
Length = 354
Score = 494 (179.0 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 92/159 (57%), Positives = 119/159 (74%)
Query: 76 RAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVAKPKW 135
R + LE+VA VPGMVGGML H +SLRR + GWI+ LLEEA NERMHL+TF+++A+P W
Sbjct: 152 RFVFLESVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKMAEPGW 211
Query: 136 YERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNI---EN 192
+ R +V QGVFFN +FL YLISP+ HR VGYLEEEA+ +YT +K+L+ G + E
Sbjct: 212 FMRLMVLGAQGVFFNGFFLSYLISPRTCHRFVGYLEEEAVLTYTRAIKDLESGRLPHWEK 271
Query: 193 VPAPAIATDYWRLPP-NSTLKDVVLVVRADEAHHRDVNH 230
+ AP IA YW++P N T+KD++L VRADEA HR+VNH
Sbjct: 272 LEAPEIAVKYWKMPEGNRTMKDLLLYVRADEAKHREVNH 310
Score = 52 (23.4 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 43 HHAPTTFSDKMALWTVKSLRWPTDL 67
H +SD +AL +V+ LRW DL
Sbjct: 101 HREAKNWSDWVALGSVRLLRWGMDL 125
>UNIPROTKB|O93788 [details] [associations]
symbol:AOX1 "Alternative oxidase, mitochondrial"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002680 Pfam:PF01786
PIRSF:PIRSF005229 GO:GO:0016021 GO:GO:0005743 EMBL:CM001233
GO:GO:0046872 GO:GO:0022900 GO:GO:0007585 GO:GO:0070469
GO:GO:0043581 eggNOG:NOG80852 GO:GO:0009916 OrthoDB:EOG42NN8B
EMBL:AB005144 EMBL:AF325683 RefSeq:XP_003712663.1
EnsemblFungi:MGG_12936T0 GeneID:5048866 KEGG:mgr:MGG_12936
Uniprot:O93788
Length = 377
Score = 457 (165.9 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 84/167 (50%), Positives = 118/167 (70%)
Query: 76 RAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVAKPKW 135
R + LE++AAVPGMV GML H SLRR + GWI+ LLEEA NERMHL+TF+++ +P W
Sbjct: 151 RFIFLESIAAVPGMVAGMLRHLHSLRRLKRDNGWIETLLEEAYNERMHLLTFLKMCEPGW 210
Query: 136 YERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIEN--- 192
+ L+ QGV+FNA F+ YLISPK HR VGYLEEEA+H+YT ++EL++G++
Sbjct: 211 LMKILIIGAQGVYFNAMFVAYLISPKICHRFVGYLEEEAVHTYTRSIEELERGDLPKWSD 270
Query: 193 --VPAPAIATDYWRLPP-NSTLKDVVLVVRADEAHHRDVNHYASDIH 236
P IA YW +P + T++D++L +RADEA+HR V+H +++
Sbjct: 271 PKFQVPEIAVSYWGMPEGHRTMRDLLLYIRADEANHRGVHHTLGNLN 317
Score = 48 (22.0 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 43 HHAPTTFSDKMALWTVKSLRWPTD 66
H P T DK A V+ RW D
Sbjct: 93 HRKPRTLGDKFAWSLVRISRWGMD 116
>DICTYBASE|DDB_G0280819 [details] [associations]
symbol:aoxA species:44689 "Dictyostelium discoideum"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009916
"alternative oxidase activity" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002680 Pfam:PF01786
PIRSF:PIRSF005229 dictyBase:DDB_G0280819 GenomeReviews:CM000152_GR
GO:GO:0007585 eggNOG:NOG80852 GO:GO:0009916 EMBL:AAFI02000025
EMBL:AB046418 RefSeq:XP_641001.1 STRING:Q8WSV6 PRIDE:Q8WSV6
EnsemblProtists:DDB0214926 GeneID:8621802 KEGG:ddi:DDB_G0280819
InParanoid:Q8WSV6 OMA:VNHEISN Uniprot:Q8WSV6
Length = 337
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 91/187 (48%), Positives = 133/187 (71%)
Query: 48 TFSDKMALWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSG 107
+ SD A ++V LR ++LFF+ ++ A++LETVAAVPG+V GM LH K+LR + S
Sbjct: 102 SLSDNFAKFSVLFLRKFSNLFFKEKFLHYAIVLETVAAVPGLVAGMFLHLKTLRNMQ-SN 160
Query: 108 GWIKALLEEAENERMHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMV 167
WIK L++E ENERMHL++FME+ KP ER +V Q +++N + + Y++SPK AHR
Sbjct: 161 NWIKILMDEMENERMHLLSFMELTKPTLLERGMVAVTQAIYWNLFLVFYVLSPKTAHRFT 220
Query: 168 GYLEEEAIHSYTEFLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRD 227
GYLEE+A+ +YT L+++D G + N AP IA +YW LP ++TL+D++LV+R DE+ HR
Sbjct: 221 GYLEEQAVVTYTHMLEDIDSGKVPNYKAPQIAIEYWGLPEDATLRDLILVIRQDESDHRL 280
Query: 228 VNHYASD 234
VNH S+
Sbjct: 281 VNHEISN 287
>CGD|CAL0004550 [details] [associations]
symbol:AOX1 species:5476 "Candida albicans" [GO:0009916
"alternative oxidase activity" evidence=ISA;IMP] [GO:0045333
"cellular respiration" evidence=IMP] [GO:0010230 "alternative
respiration" evidence=IMP] [GO:0005743 "mitochondrial inner
membrane" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005740 "mitochondrial envelope" evidence=IEA]
InterPro:IPR002680 Pfam:PF01786 PIRSF:PIRSF005229 CGD:CAL0004550
GO:GO:0016021 GO:GO:0005739 GO:GO:0046872 GO:GO:0022900
GO:GO:0007585 GO:GO:0070469 EMBL:AACQ01000001 EMBL:AACQ01000002
GO:GO:0009916 GO:GO:0010230 RefSeq:XP_723270.1 RefSeq:XP_723460.1
GeneID:3634946 GeneID:3635094 KEGG:cal:CaO19.12237
KEGG:cal:CaO19.4774 Uniprot:Q5APJ1
Length = 379
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 83/188 (44%), Positives = 120/188 (63%)
Query: 59 KSLRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAE 118
K RW + ++ R + LE++A VPG V G + H SLR WI+ L +EA
Sbjct: 161 KGTRWEMT---EGKWMTRCIFLESIAGVPGSVAGFIRHLHSLRMLTRDKAWIETLHDEAY 217
Query: 119 NERMHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSY 178
NERMHL+TF+++ KP W+ R++++ QGVF N +FL YL++P++ HR VGYLEEEA+ +Y
Sbjct: 218 NERMHLLTFIKIGKPSWFTRSIIYIGQGVFTNIFFLVYLMNPRYCHRFVGYLEEEAVRTY 277
Query: 179 TEFLKELDKGN----IENVPAPAIATDYW-RLPPNSTLKDVVLVVRADEAHHRDVNH-YA 232
T + ELD N + +P P IA YW L P S+ KD++L +RADEA HR++NH +A
Sbjct: 278 THLIDELDDPNKLPDFQKLPIPNIAVQYWPELTPESSFKDLILRIRADEAKHREINHTFA 337
Query: 233 SDIHYQGR 240
+ +Q R
Sbjct: 338 NLEQWQDR 345
>UNIPROTKB|Q5APJ1 [details] [associations]
symbol:AOX1 "Alternative oxidase" species:237561 "Candida
albicans SC5314" [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009916 "alternative oxidase activity" evidence=ISA;IMP]
[GO:0010230 "alternative respiration" evidence=IMP] [GO:0045333
"cellular respiration" evidence=IMP] InterPro:IPR002680
Pfam:PF01786 PIRSF:PIRSF005229 CGD:CAL0004550 GO:GO:0016021
GO:GO:0005739 GO:GO:0046872 GO:GO:0022900 GO:GO:0007585
GO:GO:0070469 EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0009916
GO:GO:0010230 RefSeq:XP_723270.1 RefSeq:XP_723460.1 GeneID:3634946
GeneID:3635094 KEGG:cal:CaO19.12237 KEGG:cal:CaO19.4774
Uniprot:Q5APJ1
Length = 379
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 83/188 (44%), Positives = 120/188 (63%)
Query: 59 KSLRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAE 118
K RW + ++ R + LE++A VPG V G + H SLR WI+ L +EA
Sbjct: 161 KGTRWEMT---EGKWMTRCIFLESIAGVPGSVAGFIRHLHSLRMLTRDKAWIETLHDEAY 217
Query: 119 NERMHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSY 178
NERMHL+TF+++ KP W+ R++++ QGVF N +FL YL++P++ HR VGYLEEEA+ +Y
Sbjct: 218 NERMHLLTFIKIGKPSWFTRSIIYIGQGVFTNIFFLVYLMNPRYCHRFVGYLEEEAVRTY 277
Query: 179 TEFLKELDKGN----IENVPAPAIATDYW-RLPPNSTLKDVVLVVRADEAHHRDVNH-YA 232
T + ELD N + +P P IA YW L P S+ KD++L +RADEA HR++NH +A
Sbjct: 278 THLIDELDDPNKLPDFQKLPIPNIAVQYWPELTPESSFKDLILRIRADEAKHREINHTFA 337
Query: 233 SDIHYQGR 240
+ +Q R
Sbjct: 338 NLEQWQDR 345
>CGD|CAL0004548 [details] [associations]
symbol:AOX2 species:5476 "Candida albicans" [GO:0009916
"alternative oxidase activity" evidence=ISS;IMP] [GO:0005739
"mitochondrion" evidence=ISS;IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0010230 "alternative respiration" evidence=IMP]
InterPro:IPR002680 Pfam:PF01786 PIRSF:PIRSF005229 GO:GO:0016021
GO:GO:0005739 GO:GO:0005886 GO:GO:0046872 GO:GO:0022900
GO:GO:0007585 GO:GO:0070469 EMBL:AACQ01000002 GO:GO:0009916
GO:GO:0010230 RefSeq:XP_723269.1 STRING:Q5APJ2 GeneID:3635093
KEGG:cal:CaO19.12236 Uniprot:Q5APJ2
Length = 365
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 82/177 (46%), Positives = 114/177 (64%)
Query: 59 KSLRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAE 118
K RW + ++ R + LE+VA VPG V G L H SLR WI+ LL+EA
Sbjct: 147 KGTRWEMT---EGKWLTRCIFLESVAGVPGSVAGFLRHLHSLRMLRRDKAWIETLLDEAY 203
Query: 119 NERMHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSY 178
NERMHL+TF+++ KP W+ R++++ QGVF N +FL YL++P++ HR VGYLEEEA+ +Y
Sbjct: 204 NERMHLLTFIKIGKPSWFTRSIIYVGQGVFTNVFFLLYLLNPRYCHRFVGYLEEEAVRTY 263
Query: 179 TEFLKELD-KGNI---ENVPAPAIATDYW-RLPPNSTLKDVVLVVRADEAHHRDVNH 230
+ L EL G + E + P +A YW L P S+ KD++L +RADEA HR+VNH
Sbjct: 264 SHLLDELAVPGKLPAFETMKIPEVAVQYWPELTPKSSFKDLILRIRADEAKHREVNH 320
>UNIPROTKB|Q5APJ2 [details] [associations]
symbol:AOX2 "Alternative oxidase" species:237561 "Candida
albicans SC5314" [GO:0005739 "mitochondrion" evidence=ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009916
"alternative oxidase activity" evidence=ISS;IMP] [GO:0010230
"alternative respiration" evidence=IMP] InterPro:IPR002680
Pfam:PF01786 PIRSF:PIRSF005229 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0046872 GO:GO:0022900 GO:GO:0007585
GO:GO:0070469 EMBL:AACQ01000002 GO:GO:0009916 GO:GO:0010230
RefSeq:XP_723269.1 STRING:Q5APJ2 GeneID:3635093
KEGG:cal:CaO19.12236 Uniprot:Q5APJ2
Length = 365
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 82/177 (46%), Positives = 114/177 (64%)
Query: 59 KSLRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAE 118
K RW + ++ R + LE+VA VPG V G L H SLR WI+ LL+EA
Sbjct: 147 KGTRWEMT---EGKWLTRCIFLESVAGVPGSVAGFLRHLHSLRMLRRDKAWIETLLDEAY 203
Query: 119 NERMHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSY 178
NERMHL+TF+++ KP W+ R++++ QGVF N +FL YL++P++ HR VGYLEEEA+ +Y
Sbjct: 204 NERMHLLTFIKIGKPSWFTRSIIYVGQGVFTNVFFLLYLLNPRYCHRFVGYLEEEAVRTY 263
Query: 179 TEFLKELD-KGNI---ENVPAPAIATDYW-RLPPNSTLKDVVLVVRADEAHHRDVNH 230
+ L EL G + E + P +A YW L P S+ KD++L +RADEA HR+VNH
Sbjct: 264 SHLLDELAVPGKLPAFETMKIPEVAVQYWPELTPKSSFKDLILRIRADEAKHREVNH 320
>TAIR|locus:2005514 [details] [associations]
symbol:IM "IMMUTANS" species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0005740
"mitochondrial envelope" evidence=IEA] [GO:0007585 "respiratory
gaseous exchange" evidence=IEA] [GO:0009658 "chloroplast
organization" evidence=NAS] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0009657 "plastid organization"
evidence=IMP] [GO:0009916 "alternative oxidase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009266 "response to temperature
stimulus" evidence=TAS] [GO:0009644 "response to high light
intensity" evidence=TAS] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0016117 "carotenoid biosynthetic process" evidence=IMP]
InterPro:IPR002680 Pfam:PF01786 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0022900 GO:GO:0009657
GO:GO:0007585 GO:GO:0070469 GO:GO:0009579 EMBL:AL021712
GO:GO:0009535 eggNOG:NOG80852 GO:GO:0009916 EMBL:AF098072
EMBL:AJ004881 EMBL:AL161557 EMBL:AF324663 EMBL:AF326898
EMBL:AF339717 EMBL:AY045699 EMBL:BT000558 EMBL:AK221825
IPI:IPI00526561 PIR:T04907 PIR:T52422 RefSeq:NP_567658.1
UniGene:At.20480 STRING:Q56X52 PRIDE:Q56X52
EnsemblPlants:AT4G22260.1 GeneID:828321 KEGG:ath:AT4G22260
GeneFarm:1756 TAIR:At4g22260 HOGENOM:HOG000023024 InParanoid:Q56X52
OMA:FSECVES PhylomeDB:Q56X52 ProtClustDB:CLSN2689549
Genevestigator:Q56X52 GermOnline:AT4G22260 GO:GO:0046862
GO:GO:0016117 Uniprot:Q56X52
Length = 351
Score = 153 (58.9 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 41/140 (29%), Positives = 68/140 (48%)
Query: 66 DLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLM 125
D ++ R R +LET+A VP +LH + ++K E+ NE HL+
Sbjct: 121 DTLYRDRTYARFFVLETIARVPYFAFMSVLHMYETFGWWRRADYLKVHFAESWNEMHHLL 180
Query: 126 TFMEVAKPKW-YERALVFAVQGVF-FNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLK 183
E+ W ++R L + + F FL Y++SP+ A+ +E A +Y +FLK
Sbjct: 181 IMEELGGNSWWFDRFLAQHIATFYYFMTVFL-YILSPRMAYHFSECVESHAYETYDKFLK 239
Query: 184 ELDKGNIENVPAPAIATDYW 203
+ ++N+PAP IA Y+
Sbjct: 240 ASGE-ELKNMPAPDIAVKYY 258
Score = 43 (20.2 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 204 RLPPNSTLKDVVLVVRADEAHH 225
R P L DV + +R DEA H
Sbjct: 278 RRPVIENLYDVFVNIRDDEAEH 299
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.444 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 252 252 0.00082 114 3 11 22 0.41 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 619 (66 KB)
Total size of DFA: 229 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.55u 0.15s 20.70t Elapsed: 00:00:01
Total cpu time: 20.55u 0.15s 20.70t Elapsed: 00:00:01
Start: Fri May 10 10:11:21 2013 End: Fri May 10 10:11:22 2013