Query 025474
Match_columns 252
No_of_seqs 198 out of 1621
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 11:03:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025474.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025474hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2e_A Peroxiredoxin; redox pr 100.0 9.1E-32 3.1E-36 220.3 13.7 152 69-252 4-155 (157)
2 4gqc_A Thiol peroxidase, perox 100.0 3.1E-32 1.1E-36 225.2 8.0 151 69-251 5-156 (164)
3 3mng_A Peroxiredoxin-5, mitoch 100.0 2.9E-28 1E-32 204.0 16.7 153 68-250 14-173 (173)
4 3uma_A Hypothetical peroxiredo 100.0 1.1E-27 3.7E-32 202.4 15.6 151 68-250 25-184 (184)
5 3p7x_A Probable thiol peroxida 99.9 3.4E-26 1.2E-30 187.6 17.6 145 68-252 19-165 (166)
6 1tp9_A Peroxiredoxin, PRX D (t 99.9 2.3E-26 7.7E-31 188.6 15.4 149 69-250 4-162 (162)
7 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 1.3E-25 4.6E-30 186.1 17.8 150 69-250 3-159 (167)
8 1psq_A Probable thiol peroxida 99.9 1.2E-25 4.2E-30 183.7 17.0 144 69-251 16-161 (163)
9 2pwj_A Mitochondrial peroxired 99.9 9.4E-26 3.2E-30 187.4 14.9 150 69-250 7-171 (171)
10 2yzh_A Probable thiol peroxida 99.9 1.4E-25 5E-30 184.5 15.9 146 69-251 21-168 (171)
11 3gkn_A Bacterioferritin comigr 99.9 1.9E-25 6.5E-30 181.4 16.4 153 66-251 4-158 (163)
12 3ixr_A Bacterioferritin comigr 99.9 9.7E-26 3.3E-30 187.9 13.9 151 68-251 20-174 (179)
13 3tue_A Tryparedoxin peroxidase 99.9 9.9E-26 3.4E-30 195.8 14.0 146 68-251 25-181 (219)
14 1q98_A Thiol peroxidase, TPX; 99.9 1.3E-25 4.3E-30 184.3 13.3 147 69-251 17-165 (165)
15 3sbc_A Peroxiredoxin TSA1; alp 99.9 1.7E-25 5.7E-30 194.0 14.6 146 68-251 22-177 (216)
16 3zrd_A Thiol peroxidase; oxido 99.9 1.4E-25 4.9E-30 190.9 13.6 147 69-251 52-200 (200)
17 3drn_A Peroxiredoxin, bacterio 99.9 7E-25 2.4E-29 178.7 17.1 143 69-251 2-145 (161)
18 4f82_A Thioredoxin reductase; 99.9 4.3E-25 1.5E-29 185.8 15.2 152 69-252 10-176 (176)
19 1xiy_A Peroxiredoxin, pfaop; a 99.9 5.6E-25 1.9E-29 186.0 15.5 151 70-252 2-179 (182)
20 3keb_A Probable thiol peroxida 99.9 8.7E-25 3E-29 190.5 16.7 145 68-251 21-172 (224)
21 2xhf_A Peroxiredoxin 5; oxidor 99.9 2.3E-25 7.8E-30 186.7 10.8 152 68-251 13-170 (171)
22 1prx_A HORF6; peroxiredoxin, h 99.9 2.5E-24 8.6E-29 186.7 16.8 151 69-251 5-165 (224)
23 1xvw_A Hypothetical protein RV 99.9 5E-24 1.7E-28 172.2 17.2 146 69-251 9-156 (160)
24 1nm3_A Protein HI0572; hybrid, 99.9 2.6E-24 8.8E-29 186.8 16.3 151 69-251 3-163 (241)
25 2c0d_A Thioredoxin peroxidase 99.9 4.4E-24 1.5E-28 184.8 16.4 146 68-251 24-180 (221)
26 1n8j_A AHPC, alkyl hydroperoxi 99.9 4E-24 1.4E-28 179.3 15.3 144 70-251 2-152 (186)
27 2v2g_A Peroxiredoxin 6; oxidor 99.9 5.9E-24 2E-28 185.9 15.5 151 69-251 3-161 (233)
28 1xcc_A 1-Cys peroxiredoxin; un 99.9 6.5E-24 2.2E-28 183.6 14.7 151 69-251 3-162 (220)
29 2a4v_A Peroxiredoxin DOT5; yea 99.9 3.4E-24 1.2E-28 174.0 11.7 133 68-238 6-139 (159)
30 2i81_A 2-Cys peroxiredoxin; st 99.9 2.7E-23 9.4E-28 178.4 16.7 146 68-251 20-176 (213)
31 1xvq_A Thiol peroxidase; thior 99.9 2.3E-23 7.7E-28 172.5 13.7 146 68-251 17-164 (175)
32 2jsy_A Probable thiol peroxida 99.9 9.6E-24 3.3E-28 172.2 11.1 144 68-251 17-163 (167)
33 2pn8_A Peroxiredoxin-4; thiore 99.9 4.3E-23 1.5E-27 176.9 15.5 146 68-251 18-173 (211)
34 1we0_A Alkyl hydroperoxide red 99.9 6.1E-23 2.1E-27 171.0 15.6 144 70-251 2-153 (187)
35 3tjj_A Peroxiredoxin-4; thiore 99.9 3.8E-23 1.3E-27 182.9 15.0 147 67-251 60-216 (254)
36 2h01_A 2-Cys peroxiredoxin; th 99.9 3.1E-23 1E-27 173.8 13.6 144 70-251 1-155 (192)
37 3qpm_A Peroxiredoxin; oxidored 99.9 7.1E-23 2.4E-27 179.3 16.4 146 68-251 47-202 (240)
38 2bmx_A Alkyl hydroperoxidase C 99.9 1.5E-22 5.2E-27 170.1 16.2 145 68-251 3-166 (195)
39 3ztl_A Thioredoxin peroxidase; 99.9 1.6E-22 5.6E-27 174.2 16.3 145 68-251 39-194 (222)
40 4eo3_A Bacterioferritin comigr 99.9 5E-23 1.7E-27 187.9 13.7 134 73-251 2-135 (322)
41 1zye_A Thioredoxin-dependent p 99.9 1.7E-22 6E-27 174.0 16.1 146 68-251 26-181 (220)
42 1uul_A Tryparedoxin peroxidase 99.9 2.9E-22 1E-26 169.4 16.9 146 68-251 5-161 (202)
43 1qmv_A Human thioredoxin perox 99.9 2.2E-22 7.5E-27 169.4 16.0 146 68-251 4-159 (197)
44 3a2v_A Probable peroxiredoxin; 99.9 2.2E-22 7.4E-27 177.8 15.5 146 69-251 5-158 (249)
45 1zof_A Alkyl hydroperoxide-red 99.9 1.9E-22 6.7E-27 169.6 14.5 144 70-251 2-157 (198)
46 3u5r_E Uncharacterized protein 99.9 6.1E-22 2.1E-26 169.9 15.6 140 68-250 31-182 (218)
47 3gl3_A Putative thiol:disulfid 99.9 2E-21 6.7E-26 154.9 16.7 137 69-250 3-140 (152)
48 3kcm_A Thioredoxin family prot 99.9 1.9E-21 6.5E-26 155.3 16.1 137 70-250 3-141 (154)
49 3ewl_A Uncharacterized conserv 99.9 5E-21 1.7E-25 151.1 16.8 130 70-251 2-137 (142)
50 1xzo_A BSSCO, hypothetical pro 99.9 4E-21 1.4E-25 156.6 14.7 153 68-251 6-168 (174)
51 2ywi_A Hypothetical conserved 99.9 7.2E-21 2.4E-25 158.4 16.5 140 68-250 17-169 (196)
52 1jfu_A Thiol:disulfide interch 99.9 5.2E-21 1.8E-25 158.3 15.2 143 68-250 33-178 (186)
53 3lwa_A Secreted thiol-disulfid 99.9 2.4E-20 8.2E-25 154.1 17.6 136 69-250 31-176 (183)
54 2obi_A PHGPX, GPX-4, phospholi 99.9 7.2E-21 2.5E-25 157.9 14.2 149 65-250 17-179 (183)
55 3hdc_A Thioredoxin family prot 99.9 5.9E-21 2E-25 154.2 13.2 139 65-249 11-149 (158)
56 3fw2_A Thiol-disulfide oxidore 99.9 1.4E-20 4.8E-25 150.5 14.9 122 68-233 4-134 (150)
57 3eur_A Uncharacterized protein 99.9 2.5E-20 8.4E-25 147.8 16.1 131 69-251 5-141 (142)
58 4fo5_A Thioredoxin-like protei 99.8 9.5E-21 3.2E-25 150.4 13.5 122 67-233 5-131 (143)
59 2lrn_A Thiol:disulfide interch 99.8 2.5E-20 8.5E-25 149.4 15.9 133 69-250 3-139 (152)
60 3eyt_A Uncharacterized protein 99.8 1.3E-20 4.4E-25 151.3 14.0 121 71-235 2-137 (158)
61 2f9s_A Thiol-disulfide oxidore 99.8 5.7E-20 2E-24 146.7 17.4 131 71-250 2-133 (151)
62 3hcz_A Possible thiol-disulfid 99.8 9.7E-21 3.3E-25 149.4 10.8 134 68-250 4-141 (148)
63 3lor_A Thiol-disulfide isomera 99.8 2.8E-20 9.4E-25 149.4 13.0 121 71-235 5-140 (160)
64 2cvb_A Probable thiol-disulfid 99.8 1.1E-19 3.7E-24 150.8 16.2 101 68-171 6-114 (188)
65 2p31_A CL683, glutathione pero 99.8 1.9E-20 6.5E-25 155.5 11.2 91 68-160 22-121 (181)
66 2l5o_A Putative thioredoxin; s 99.8 1E-19 3.5E-24 145.0 14.9 132 70-250 3-136 (153)
67 2lrt_A Uncharacterized protein 99.8 1.4E-19 4.8E-24 146.0 15.7 131 69-250 9-143 (152)
68 3me7_A Putative uncharacterize 99.8 8E-20 2.7E-24 150.8 14.2 143 70-251 2-158 (170)
69 2gs3_A PHGPX, GPX-4, phospholi 99.8 8E-20 2.7E-24 152.2 14.2 138 66-235 20-171 (185)
70 3kij_A Probable glutathione pe 99.8 3.9E-20 1.3E-24 153.3 12.2 92 69-162 12-112 (180)
71 2v1m_A Glutathione peroxidase; 99.8 1.2E-19 4.2E-24 146.8 14.9 94 69-164 5-109 (169)
72 3or5_A Thiol:disulfide interch 99.8 3.4E-19 1.2E-23 143.4 17.2 138 69-250 8-146 (165)
73 3erw_A Sporulation thiol-disul 99.8 2.6E-19 9E-24 140.4 16.0 133 68-250 8-144 (145)
74 3kh7_A Thiol:disulfide interch 99.8 3.7E-19 1.3E-23 147.2 17.4 121 67-235 28-152 (176)
75 3fkf_A Thiol-disulfide oxidore 99.8 8.6E-20 2.9E-24 143.9 12.9 122 68-233 4-132 (148)
76 2p5q_A Glutathione peroxidase 99.8 1.9E-19 6.6E-24 145.8 13.8 94 69-164 6-110 (170)
77 2k6v_A Putative cytochrome C o 99.8 6.3E-20 2.2E-24 149.0 10.2 149 69-251 10-169 (172)
78 3ia1_A THIO-disulfide isomeras 99.8 2.2E-19 7.7E-24 143.4 13.2 131 68-251 4-140 (154)
79 2i3y_A Epididymal secretory gl 99.8 2.9E-19 9.9E-24 154.2 14.5 90 70-162 30-134 (215)
80 2vup_A Glutathione peroxidase- 99.8 1.5E-19 5.2E-24 151.1 12.1 95 68-164 21-126 (190)
81 2ggt_A SCO1 protein homolog, m 99.8 5.1E-19 1.7E-23 142.5 14.4 144 74-251 2-157 (164)
82 2ls5_A Uncharacterized protein 99.7 2.7E-21 9.2E-26 155.9 0.0 139 68-251 6-147 (159)
83 3raz_A Thioredoxin-related pro 99.8 5.1E-19 1.7E-23 141.5 12.6 119 74-235 4-125 (151)
84 2f8a_A Glutathione peroxidase 99.8 6.4E-19 2.2E-23 150.6 14.0 91 70-162 21-126 (208)
85 2b5x_A YKUV protein, TRXY; thi 99.8 7.5E-19 2.6E-23 138.2 13.3 121 70-235 2-130 (148)
86 1lu4_A Soluble secreted antige 99.8 2E-18 7E-23 134.1 15.6 130 73-251 2-132 (136)
87 2r37_A Glutathione peroxidase 99.8 8.2E-19 2.8E-23 150.3 13.9 88 72-162 14-116 (207)
88 3ha9_A Uncharacterized thiored 99.8 2.8E-19 9.5E-24 144.9 10.4 98 69-171 11-128 (165)
89 2rli_A SCO2 protein homolog, m 99.8 4.6E-18 1.6E-22 138.0 17.3 138 76-250 7-159 (171)
90 3dwv_A Glutathione peroxidase- 99.8 5.9E-20 2E-24 153.4 6.0 91 68-160 19-118 (187)
91 4evm_A Thioredoxin family prot 99.8 4E-18 1.4E-22 131.5 15.6 128 74-251 1-135 (138)
92 2lja_A Putative thiol-disulfid 99.8 1.1E-18 3.7E-23 138.9 12.5 136 69-250 3-141 (152)
93 3cmi_A Peroxiredoxin HYR1; thi 99.8 6E-19 2.1E-23 144.5 9.1 89 71-162 8-105 (171)
94 2b7k_A SCO1 protein; metalloch 99.8 3.1E-18 1.1E-22 144.7 13.6 138 69-234 13-163 (200)
95 1zzo_A RV1677; thioredoxin fol 99.8 1.1E-17 3.9E-22 129.3 15.6 127 72-250 2-130 (136)
96 2hyx_A Protein DIPZ; thioredox 99.8 5E-18 1.7E-22 156.7 15.8 124 68-235 50-184 (352)
97 2b1k_A Thiol:disulfide interch 99.8 4.2E-17 1.4E-21 132.3 17.5 120 68-234 21-144 (168)
98 1kng_A Thiol:disulfide interch 99.7 1.6E-17 5.3E-22 132.4 12.1 121 68-235 7-137 (156)
99 2h30_A Thioredoxin, peptide me 99.7 1.3E-17 4.3E-22 134.3 11.0 131 69-250 14-151 (164)
100 1i5g_A Tryparedoxin II; electr 99.7 1.2E-17 4.3E-22 132.2 10.0 99 71-171 3-106 (144)
101 4hde_A SCO1/SENC family lipopr 99.7 1.5E-16 5.1E-21 131.5 15.1 149 70-251 7-166 (170)
102 1o8x_A Tryparedoxin, TRYX, TXN 99.7 1.9E-17 6.6E-22 131.6 8.6 127 70-241 3-135 (146)
103 1o73_A Tryparedoxin; electron 99.7 5.5E-17 1.9E-21 128.0 5.5 99 70-171 3-106 (144)
104 2lus_A Thioredoxion; CR-Trp16, 99.4 1.4E-17 5E-22 130.8 0.0 124 73-238 2-131 (143)
105 3s9f_A Tryparedoxin; thioredox 99.6 1.6E-16 5.5E-21 130.1 5.7 99 70-171 23-126 (165)
106 4h86_A Peroxiredoxin type-2; o 99.4 5.3E-12 1.8E-16 107.6 14.6 148 69-250 26-199 (199)
107 2l57_A Uncharacterized protein 99.0 1.5E-09 5.1E-14 83.6 9.0 64 73-139 4-67 (126)
108 2ju5_A Thioredoxin disulfide i 98.9 5.1E-10 1.7E-14 90.2 3.7 67 69-141 24-94 (154)
109 3ul3_B Thioredoxin, thioredoxi 98.8 8.7E-08 3E-12 74.1 11.7 65 70-139 19-83 (128)
110 3fk8_A Disulphide isomerase; A 98.7 6E-08 2.1E-12 75.2 9.1 97 96-250 28-128 (133)
111 2fwh_A Thiol:disulfide interch 98.7 5.5E-09 1.9E-13 81.9 2.5 92 70-165 5-104 (134)
112 2pu9_C TRX-F, thioredoxin F-ty 98.6 4.7E-07 1.6E-11 67.7 10.0 41 97-139 24-64 (111)
113 3hxs_A Thioredoxin, TRXP; elec 98.6 3.3E-08 1.1E-12 77.3 3.7 80 80-165 36-118 (141)
114 1faa_A Thioredoxin F; electron 98.5 8.4E-07 2.9E-11 67.6 9.8 42 96-139 36-77 (124)
115 1nsw_A Thioredoxin, TRX; therm 98.5 7.4E-07 2.5E-11 65.6 8.9 46 94-140 14-59 (105)
116 2kuc_A Putative disulphide-iso 98.4 1.2E-06 4.2E-11 67.1 9.8 44 96-140 26-72 (130)
117 1xfl_A Thioredoxin H1; AT3G510 98.4 1.7E-06 5.7E-11 66.8 10.6 42 96-139 37-78 (124)
118 1t00_A Thioredoxin, TRX; redox 98.4 2.5E-06 8.6E-11 63.5 11.1 45 95-140 21-65 (112)
119 1ep7_A Thioredoxin CH1, H-type 98.4 1.7E-06 6E-11 64.3 9.6 43 97-140 24-66 (112)
120 2voc_A Thioredoxin; electron t 98.4 2.9E-06 1E-10 63.7 10.6 44 96-140 16-59 (112)
121 2vlu_A Thioredoxin, thioredoxi 98.4 2.5E-07 8.6E-12 70.3 4.3 68 71-140 8-75 (122)
122 1dby_A Chloroplast thioredoxin 98.4 5.3E-06 1.8E-10 61.1 11.2 44 96-140 18-61 (107)
123 3die_A Thioredoxin, TRX; elect 98.3 8E-06 2.7E-10 59.8 11.9 43 96-139 18-60 (106)
124 2f51_A Thioredoxin; electron t 98.3 4E-08 1.4E-12 75.3 -1.1 77 80-161 5-85 (118)
125 2i4a_A Thioredoxin; acidophIle 98.3 7.1E-06 2.4E-10 60.1 11.0 45 95-140 18-62 (107)
126 3qfa_C Thioredoxin; protein-pr 98.3 2.5E-06 8.7E-11 64.8 8.8 42 96-139 30-71 (116)
127 3d22_A TRXH4, thioredoxin H-ty 98.3 3.1E-06 1.1E-10 65.8 9.5 42 97-140 46-87 (139)
128 2dml_A Protein disulfide-isome 98.3 9.9E-07 3.4E-11 67.7 6.4 66 95-164 33-101 (130)
129 2yzu_A Thioredoxin; redox prot 98.3 3.1E-06 1.1E-10 62.1 8.9 45 95-140 16-60 (109)
130 1w4v_A Thioredoxin, mitochondr 98.3 7.2E-06 2.5E-10 62.3 11.2 44 96-140 30-73 (119)
131 2oe3_A Thioredoxin-3; electron 98.3 7.8E-06 2.7E-10 62.0 11.0 43 95-139 28-70 (114)
132 1thx_A Thioredoxin, thioredoxi 98.3 7.3E-06 2.5E-10 60.9 10.5 45 95-140 23-67 (115)
133 2e0q_A Thioredoxin; electron t 98.3 9.9E-06 3.4E-10 58.7 10.9 42 96-139 15-56 (104)
134 2dj1_A Protein disulfide-isome 98.3 9.4E-07 3.2E-11 68.6 5.1 70 80-154 19-90 (140)
135 2trx_A Thioredoxin; electron t 98.2 1.2E-05 4E-10 59.3 10.9 44 95-139 18-61 (108)
136 3p2a_A Thioredoxin 2, putative 98.2 6.2E-07 2.1E-11 70.8 4.1 78 70-153 30-107 (148)
137 1ti3_A Thioredoxin H, PTTRXH1; 98.2 8.1E-06 2.8E-10 60.5 9.9 42 96-139 25-66 (113)
138 3zzx_A Thioredoxin; oxidoreduc 98.2 1.3E-05 4.6E-10 60.5 10.9 41 96-138 19-59 (105)
139 2xc2_A Thioredoxinn; oxidoredu 98.2 9.7E-06 3.3E-10 61.1 10.1 41 96-139 32-72 (117)
140 3f3q_A Thioredoxin-1; His TAG, 98.2 2.9E-07 1E-11 69.2 1.5 68 90-162 17-87 (109)
141 2o8v_B Thioredoxin 1; disulfid 98.2 5E-06 1.7E-10 64.5 8.5 45 95-140 38-82 (128)
142 1syr_A Thioredoxin; SGPP, stru 98.2 7.6E-06 2.6E-10 61.3 9.2 46 93-140 22-67 (112)
143 1z6n_A Hypothetical protein PA 98.2 5.5E-07 1.9E-11 74.2 2.9 68 96-165 53-123 (167)
144 1xwb_A Thioredoxin; dimerizati 98.2 1.1E-05 3.6E-10 59.1 9.7 43 96-139 19-61 (106)
145 2vm1_A Thioredoxin, thioredoxi 98.2 1.8E-05 6.3E-10 59.0 11.2 41 97-139 28-68 (118)
146 2l5l_A Thioredoxin; structural 98.2 2.8E-06 9.6E-11 66.2 6.2 66 96-165 37-105 (136)
147 2dj3_A Protein disulfide-isome 98.1 5.7E-07 1.9E-11 69.3 1.9 82 79-164 8-93 (133)
148 4euy_A Uncharacterized protein 98.1 1.2E-06 4.1E-11 65.0 3.5 51 90-142 11-61 (105)
149 3f9u_A Putative exported cytoc 98.1 9.3E-07 3.2E-11 71.6 2.8 45 96-141 46-93 (172)
150 3hz4_A Thioredoxin; NYSGXRC, P 98.1 3.2E-05 1.1E-09 60.5 11.6 46 95-141 22-67 (140)
151 1sen_A Thioredoxin-like protei 98.1 7.2E-08 2.4E-12 78.6 -4.2 94 74-171 26-123 (164)
152 1r26_A Thioredoxin; redox-acti 98.1 1.1E-05 3.9E-10 62.4 8.6 44 95-140 35-78 (125)
153 3aps_A DNAJ homolog subfamily 98.1 2.4E-06 8.4E-11 64.7 4.6 72 95-170 19-93 (122)
154 2j23_A Thioredoxin; immune pro 98.1 4.5E-07 1.6E-11 69.4 0.3 49 94-142 30-78 (121)
155 1x5d_A Protein disulfide-isome 98.1 3.5E-06 1.2E-10 64.6 5.2 66 95-163 23-94 (133)
156 3gix_A Thioredoxin-like protei 98.1 3E-06 1E-10 67.8 5.0 54 96-153 22-75 (149)
157 3d6i_A Monothiol glutaredoxin- 98.0 2.4E-06 8.3E-11 63.7 3.5 54 97-153 21-74 (112)
158 1x5e_A Thioredoxin domain cont 98.0 6.8E-06 2.3E-10 62.8 5.9 53 97-153 23-75 (126)
159 3dxb_A Thioredoxin N-terminall 98.0 2.3E-05 7.8E-10 66.4 9.5 46 95-141 28-73 (222)
160 2djj_A PDI, protein disulfide- 98.0 7.6E-06 2.6E-10 61.7 5.8 60 80-140 9-72 (121)
161 2vim_A Thioredoxin, TRX; thior 98.0 3.9E-06 1.3E-10 61.2 3.5 45 96-142 18-62 (104)
162 3idv_A Protein disulfide-isome 97.9 7.1E-06 2.4E-10 69.2 4.9 68 81-153 18-87 (241)
163 1fb6_A Thioredoxin M; electron 97.9 1E-05 3.5E-10 59.1 4.8 54 96-153 17-70 (105)
164 3m9j_A Thioredoxin; oxidoreduc 97.9 5E-06 1.7E-10 60.9 3.1 46 96-143 19-64 (105)
165 1zma_A Bacterocin transport ac 97.9 2.8E-05 9.5E-10 58.7 7.2 57 95-154 27-86 (118)
166 3cxg_A Putative thioredoxin; m 97.9 2.8E-06 9.6E-11 66.4 1.6 52 96-153 39-90 (133)
167 3h79_A Thioredoxin-like protei 97.9 3.1E-05 1.1E-09 59.3 7.4 55 96-153 32-90 (127)
168 3emx_A Thioredoxin; structural 97.9 1.8E-05 6.2E-10 61.6 5.7 53 99-154 33-91 (135)
169 2yj7_A LPBCA thioredoxin; oxid 97.1 2.1E-06 7.1E-11 62.6 0.0 46 95-141 17-62 (106)
170 2wz9_A Glutaredoxin-3; protein 97.8 2.2E-05 7.6E-10 62.5 6.0 59 97-160 32-93 (153)
171 2ppt_A Thioredoxin-2; thiredox 97.8 1.9E-06 6.4E-11 69.4 -0.3 58 92-153 59-116 (155)
172 3tco_A Thioredoxin (TRXA-1); d 97.8 1.1E-05 3.9E-10 59.1 3.8 48 95-143 19-66 (109)
173 1gh2_A Thioredoxin-like protei 97.8 1.1E-05 3.8E-10 59.6 3.8 53 96-153 20-72 (107)
174 1wou_A Thioredoxin -related pr 97.8 3.4E-05 1.2E-09 59.1 6.5 44 97-141 24-74 (123)
175 3uvt_A Thioredoxin domain-cont 97.8 6.8E-06 2.3E-10 60.6 2.0 54 97-153 21-76 (111)
176 3gnj_A Thioredoxin domain prot 97.8 4.2E-05 1.4E-09 56.4 6.4 55 95-153 20-74 (111)
177 2dj0_A Thioredoxin-related tra 97.8 5E-06 1.7E-10 64.8 1.2 54 97-153 26-79 (137)
178 3q6o_A Sulfhydryl oxidase 1; p 97.7 5.1E-05 1.7E-09 64.9 6.9 65 96-161 29-98 (244)
179 2i1u_A Thioredoxin, TRX, MPT46 97.7 2E-05 6.8E-10 59.2 3.8 54 96-153 29-82 (121)
180 1ilo_A Conserved hypothetical 97.7 0.00015 5E-09 50.2 8.0 35 101-136 3-37 (77)
181 3qou_A Protein YBBN; thioredox 97.7 1E-05 3.6E-10 70.5 2.3 53 97-153 26-78 (287)
182 1qgv_A Spliceosomal protein U5 97.7 5E-05 1.7E-09 60.1 6.0 45 96-141 22-66 (142)
183 3gyk_A 27KDA outer membrane pr 97.7 6.3E-05 2.1E-09 60.7 6.1 50 84-137 11-60 (175)
184 1v98_A Thioredoxin; oxidoreduc 97.6 3.6E-05 1.2E-09 59.9 3.7 53 96-153 50-102 (140)
185 2lst_A Thioredoxin; structural 96.8 8.4E-06 2.9E-10 62.4 0.0 74 85-162 9-88 (130)
186 3apq_A DNAJ homolog subfamily 97.6 1.5E-05 5.1E-10 66.8 1.4 55 96-154 113-167 (210)
187 3ed3_A Protein disulfide-isome 97.6 9.1E-05 3.1E-09 66.0 6.0 66 96-163 34-102 (298)
188 2l6c_A Thioredoxin; oxidoreduc 97.5 2.3E-05 7.9E-10 58.7 1.6 44 96-141 18-61 (110)
189 1nho_A Probable thioredoxin; b 97.5 4E-05 1.4E-09 53.8 2.1 40 99-139 3-42 (85)
190 1oaz_A Thioredoxin 1; immune s 97.5 0.00023 8E-09 54.5 6.5 44 95-139 19-76 (123)
191 3t58_A Sulfhydryl oxidase 1; o 97.5 0.00021 7.3E-09 68.7 7.7 66 95-161 28-98 (519)
192 2dbc_A PDCL2, unnamed protein 97.4 0.00026 8.9E-09 55.2 5.8 43 97-141 30-72 (135)
193 3ira_A Conserved protein; meth 97.3 0.00021 7.3E-09 59.1 5.2 70 96-166 38-118 (173)
194 3qcp_A QSOX from trypanosoma b 97.3 0.0003 1E-08 66.9 6.6 62 98-162 43-114 (470)
195 1a8l_A Protein disulfide oxido 97.3 0.00034 1.2E-08 58.4 6.2 55 96-153 133-190 (226)
196 1fo5_A Thioredoxin; disulfide 97.3 0.00013 4.5E-09 51.1 2.9 41 98-139 3-43 (85)
197 3kp8_A Vkorc1/thioredoxin doma 97.3 1E-05 3.5E-10 61.3 -3.3 30 97-126 12-41 (106)
198 1eej_A Thiol:disulfide interch 97.3 0.00029 1E-08 59.5 5.4 38 96-137 85-122 (216)
199 1wmj_A Thioredoxin H-type; str 97.2 1.4E-05 4.6E-10 60.9 -2.9 43 97-141 36-78 (130)
200 2av4_A Thioredoxin-like protei 97.2 0.00046 1.6E-08 56.6 6.0 55 96-154 40-94 (160)
201 1mek_A Protein disulfide isome 97.2 8.3E-05 2.9E-09 55.2 1.4 46 95-140 22-69 (120)
202 3ph9_A Anterior gradient prote 97.2 9.4E-05 3.2E-09 59.9 1.5 75 97-172 44-121 (151)
203 2b5e_A Protein disulfide-isome 97.2 0.00029 9.9E-09 66.5 4.8 61 93-156 27-88 (504)
204 2r2j_A Thioredoxin domain-cont 97.1 0.00099 3.4E-08 60.8 7.5 59 95-156 20-84 (382)
205 2hls_A Protein disulfide oxido 97.1 0.00067 2.3E-08 58.4 5.9 61 96-159 137-202 (243)
206 3idv_A Protein disulfide-isome 97.1 0.00056 1.9E-08 57.3 5.2 57 95-154 145-203 (241)
207 3hd5_A Thiol:disulfide interch 97.0 0.0011 3.9E-08 54.3 6.1 43 96-139 24-66 (195)
208 2ywm_A Glutaredoxin-like prote 96.9 0.00098 3.4E-08 55.8 5.2 56 96-156 135-191 (229)
209 3iv4_A Putative oxidoreductase 96.9 0.00065 2.2E-08 52.5 3.6 44 93-139 20-63 (112)
210 1sji_A Calsequestrin 2, calseq 96.9 0.00031 1.1E-08 63.3 2.0 56 94-153 25-87 (350)
211 3f8u_A Protein disulfide-isome 96.9 0.0017 5.6E-08 60.7 6.8 53 98-154 22-74 (481)
212 2es7_A Q8ZP25_salty, putative 96.8 0.0003 1E-08 56.0 1.4 58 92-154 29-90 (142)
213 3f8u_A Protein disulfide-isome 96.8 0.0011 3.8E-08 61.9 5.6 45 96-140 369-414 (481)
214 1a0r_P Phosducin, MEKA, PP33; 96.8 0.00093 3.2E-08 58.2 4.1 42 97-140 133-174 (245)
215 3uem_A Protein disulfide-isome 96.7 0.0018 6.2E-08 58.1 6.0 45 95-139 265-310 (361)
216 1ego_A Glutaredoxin; electron 96.7 0.0016 5.5E-08 45.8 4.4 56 101-158 3-62 (85)
217 1h75_A Glutaredoxin-like prote 96.7 0.0045 1.5E-07 43.2 6.6 53 101-160 3-56 (81)
218 2k8s_A Thioredoxin; dimer, str 96.6 0.0018 6.2E-08 45.5 4.1 53 101-156 4-57 (80)
219 2e7p_A Glutaredoxin; thioredox 96.6 0.0021 7.2E-08 47.9 4.5 57 95-158 18-77 (116)
220 1r7h_A NRDH-redoxin; thioredox 96.5 0.007 2.4E-07 41.2 6.6 53 101-160 3-56 (75)
221 2qgv_A Hydrogenase-1 operon pr 96.5 0.0015 5E-08 52.4 3.3 54 96-153 34-89 (140)
222 1a8l_A Protein disulfide oxido 96.5 0.0062 2.1E-07 50.5 7.2 56 96-154 21-77 (226)
223 3apo_A DNAJ homolog subfamily 96.5 0.0034 1.2E-07 62.3 6.4 47 96-143 454-500 (780)
224 3evi_A Phosducin-like protein 96.5 0.0042 1.4E-07 47.8 5.6 40 99-140 25-64 (118)
225 3apo_A DNAJ homolog subfamily 96.4 0.0018 6.2E-08 64.3 4.2 54 96-153 674-727 (780)
226 1wjk_A C330018D20RIK protein; 96.4 0.0031 1E-07 46.8 4.4 69 85-160 4-73 (100)
227 2znm_A Thiol:disulfide interch 96.4 0.0012 4E-08 54.1 2.1 42 96-138 21-62 (195)
228 2b5e_A Protein disulfide-isome 96.4 0.0022 7.6E-08 60.3 4.2 44 96-139 375-420 (504)
229 3h93_A Thiol:disulfide interch 96.3 0.0082 2.8E-07 48.9 6.9 41 96-137 24-64 (192)
230 2qsi_A Putative hydrogenase ex 96.3 0.0065 2.2E-07 48.4 6.0 53 97-153 33-87 (137)
231 2trc_P Phosducin, MEKA, PP33; 96.3 0.0024 8.3E-08 54.2 3.4 40 98-139 121-160 (217)
232 2ywm_A Glutaredoxin-like prote 96.2 0.0095 3.2E-07 49.7 6.8 56 96-154 20-80 (229)
233 2rem_A Disulfide oxidoreductas 96.2 0.0066 2.2E-07 49.3 5.6 41 96-137 24-64 (193)
234 2fgx_A Putative thioredoxin; N 96.2 0.0082 2.8E-07 45.7 5.7 54 99-158 30-83 (107)
235 3ga4_A Dolichyl-diphosphooligo 96.1 0.015 5.2E-07 48.2 7.4 55 97-154 37-102 (178)
236 1z6m_A Conserved hypothetical 95.9 0.017 5.9E-07 46.2 6.7 50 87-138 19-69 (175)
237 3us3_A Calsequestrin-1; calciu 95.7 0.012 4E-07 53.5 5.6 57 95-154 28-90 (367)
238 1ttz_A Conserved hypothetical 95.6 0.015 5.1E-07 42.3 4.8 50 101-159 3-52 (87)
239 1t3b_A Thiol:disulfide interch 95.5 0.013 4.3E-07 49.2 4.7 38 96-137 85-122 (211)
240 2klx_A Glutaredoxin; thioredox 95.3 0.053 1.8E-06 38.5 6.8 52 101-160 8-61 (89)
241 3c1r_A Glutaredoxin-1; oxidize 95.2 0.034 1.2E-06 42.3 5.9 53 101-160 27-89 (118)
242 1kte_A Thioltransferase; redox 95.1 0.021 7E-07 41.8 4.1 50 102-158 15-72 (105)
243 1wik_A Thioredoxin-like protei 95.1 0.087 3E-06 39.2 7.7 60 93-160 11-77 (109)
244 2hze_A Glutaredoxin-1; thiored 95.0 0.04 1.4E-06 41.3 5.6 53 101-160 21-82 (114)
245 1fov_A Glutaredoxin 3, GRX3; a 94.9 0.077 2.6E-06 36.5 6.5 52 102-160 4-57 (82)
246 2yan_A Glutaredoxin-3; oxidore 94.8 0.07 2.4E-06 39.3 6.5 58 95-160 15-79 (105)
247 3l78_A Regulatory protein SPX; 94.8 0.07 2.4E-06 41.0 6.7 66 101-173 2-71 (120)
248 2khp_A Glutaredoxin; thioredox 94.5 0.12 4.2E-06 36.6 7.0 53 101-160 8-62 (92)
249 3rhb_A ATGRXC5, glutaredoxin-C 94.5 0.085 2.9E-06 39.2 6.3 53 101-160 21-80 (113)
250 3fz4_A Putative arsenate reduc 94.5 0.099 3.4E-06 40.2 6.8 67 100-173 4-74 (120)
251 1v58_A Thiol:disulfide interch 94.5 0.062 2.1E-06 45.9 6.2 46 87-137 89-134 (241)
252 1pn0_A Phenol 2-monooxygenase; 94.5 0.37 1.3E-05 47.2 12.5 72 69-140 479-566 (665)
253 3rdw_A Putative arsenate reduc 94.4 0.12 4E-06 39.8 7.0 66 101-173 7-77 (121)
254 3gkx_A Putative ARSC family re 94.4 0.099 3.4E-06 40.2 6.6 65 101-172 6-74 (120)
255 3dml_A Putative uncharacterize 94.3 0.021 7.2E-07 44.1 2.6 42 98-139 19-61 (116)
256 3f0i_A Arsenate reductase; str 94.3 0.12 4.2E-06 39.6 6.9 66 101-173 6-76 (119)
257 2dlx_A UBX domain-containing p 94.3 0.13 4.4E-06 41.3 7.3 88 97-193 42-136 (153)
258 3msz_A Glutaredoxin 1; alpha-b 94.3 0.13 4.4E-06 35.8 6.5 53 101-160 6-67 (89)
259 3qmx_A Glutaredoxin A, glutare 94.2 0.11 3.9E-06 38.2 6.4 53 101-160 18-74 (99)
260 1z3e_A Regulatory protein SPX; 94.2 0.13 4.5E-06 39.9 7.0 66 101-173 3-72 (132)
261 2cq9_A GLRX2 protein, glutared 94.2 0.11 3.6E-06 40.1 6.4 48 104-158 32-84 (130)
262 3ctg_A Glutaredoxin-2; reduced 94.1 0.092 3.1E-06 40.7 5.9 53 101-160 39-101 (129)
263 3ic4_A Glutaredoxin (GRX-1); s 94.1 0.12 4.1E-06 36.6 6.1 55 101-160 14-73 (92)
264 2wci_A Glutaredoxin-4; redox-a 93.9 0.13 4.5E-06 40.4 6.5 55 100-161 37-98 (135)
265 3hz8_A Thiol:disulfide interch 93.9 0.055 1.9E-06 44.4 4.5 41 96-137 23-63 (193)
266 1hyu_A AHPF, alkyl hydroperoxi 93.8 0.054 1.8E-06 51.4 4.9 60 96-160 116-177 (521)
267 1aba_A Glutaredoxin; electron 93.8 0.29 9.9E-06 34.5 7.7 46 102-154 3-58 (87)
268 1s3c_A Arsenate reductase; ARS 93.6 0.13 4.6E-06 40.7 6.2 67 101-174 4-74 (141)
269 2ht9_A Glutaredoxin-2; thiored 93.5 0.15 5E-06 40.5 6.2 48 104-158 54-106 (146)
270 3h8q_A Thioredoxin reductase 3 93.0 0.31 1E-05 36.5 7.0 50 104-160 22-77 (114)
271 3ihg_A RDME; flavoenzyme, anth 92.9 0.37 1.3E-05 45.3 9.1 35 67-102 418-452 (535)
272 3uem_A Protein disulfide-isome 92.8 0.19 6.7E-06 44.6 6.6 56 97-154 135-190 (361)
273 3l9v_A Putative thiol-disulfid 92.5 0.081 2.8E-06 43.3 3.4 41 96-138 14-57 (189)
274 2ct6_A SH3 domain-binding glut 92.4 0.32 1.1E-05 36.5 6.4 48 101-150 10-59 (111)
275 2dkh_A 3-hydroxybenzoate hydro 92.3 0.25 8.7E-06 48.0 7.2 35 69-103 467-504 (639)
276 2qc7_A ERP31, ERP28, endoplasm 92.2 0.081 2.8E-06 45.6 3.1 58 95-156 20-85 (240)
277 2c0g_A ERP29 homolog, windbeut 92.1 0.12 4.1E-06 44.8 4.2 58 95-156 31-97 (248)
278 3kp9_A Vkorc1/thioredoxin doma 92.0 0.038 1.3E-06 49.3 0.8 26 101-126 201-226 (291)
279 3nzn_A Glutaredoxin; structura 91.9 0.44 1.5E-05 34.8 6.6 21 101-121 24-44 (103)
280 1un2_A DSBA, thiol-disulfide i 91.7 0.048 1.6E-06 45.4 1.1 41 98-139 114-157 (197)
281 3gx8_A Monothiol glutaredoxin- 91.6 0.58 2E-05 35.7 7.2 56 99-161 17-82 (121)
282 2wem_A Glutaredoxin-related pr 91.3 0.6 2E-05 35.6 6.9 56 99-161 21-84 (118)
283 1t1v_A SH3BGRL3, SH3 domain-bi 91.3 0.58 2E-05 33.5 6.5 53 102-160 5-67 (93)
284 1rw1_A Conserved hypothetical 91.0 0.24 8.4E-06 37.4 4.4 64 101-173 2-69 (114)
285 2djk_A PDI, protein disulfide- 91.0 0.37 1.3E-05 36.7 5.5 53 97-154 23-75 (133)
286 3ipz_A Monothiol glutaredoxin- 90.9 0.51 1.7E-05 35.1 6.1 59 95-161 16-81 (109)
287 2kok_A Arsenate reductase; bru 90.7 0.57 2E-05 35.6 6.3 64 101-173 7-74 (120)
288 3gv1_A Disulfide interchange p 88.6 0.5 1.7E-05 37.4 4.6 36 95-136 12-47 (147)
289 3zyw_A Glutaredoxin-3; metal b 88.6 0.8 2.7E-05 34.3 5.5 61 93-161 12-79 (111)
290 3feu_A Putative lipoprotein; a 88.2 0.24 8.3E-06 40.3 2.5 36 97-136 23-58 (185)
291 2lqo_A Putative glutaredoxin R 87.4 1.1 3.8E-05 32.6 5.5 51 101-158 6-59 (92)
292 2wul_A Glutaredoxin related pr 86.9 1.8 6.1E-05 33.2 6.7 56 99-161 21-84 (118)
293 3gn3_A Putative protein-disulf 84.2 0.78 2.7E-05 37.4 3.6 43 95-137 12-54 (182)
294 3l9s_A Thiol:disulfide interch 83.9 1 3.5E-05 36.7 4.3 39 98-137 22-63 (191)
295 3c7m_A Thiol:disulfide interch 81.9 2.2 7.7E-05 33.8 5.5 39 98-138 19-58 (195)
296 3l4n_A Monothiol glutaredoxin- 81.0 4.5 0.00015 31.0 6.7 63 95-161 12-78 (127)
297 3bci_A Disulfide bond protein 80.9 2.2 7.5E-05 34.0 5.1 42 96-137 10-53 (186)
298 1nm3_A Protein HI0572; hybrid, 80.6 1.7 5.7E-05 36.3 4.4 52 101-159 172-224 (241)
299 1u6t_A SH3 domain-binding glut 79.7 5.3 0.00018 30.7 6.7 55 101-161 2-72 (121)
300 2hls_A Protein disulfide oxido 79.7 1.8 6.2E-05 36.6 4.4 45 96-141 25-75 (243)
301 2ec4_A FAS-associated factor 1 78.7 6.9 0.00024 31.8 7.5 97 95-194 53-169 (178)
302 4dvc_A Thiol:disulfide interch 77.9 3.5 0.00012 32.1 5.4 39 96-136 21-59 (184)
303 3tdg_A DSBG, putative uncharac 76.8 2.5 8.4E-05 37.2 4.4 39 97-138 147-185 (273)
304 3gha_A Disulfide bond formatio 71.6 4.8 0.00016 32.9 4.8 42 96-137 28-71 (202)
305 3gmf_A Protein-disulfide isome 70.8 8.7 0.0003 31.6 6.2 48 88-137 8-57 (205)
306 2in3_A Hypothetical protein; D 70.5 16 0.00056 29.2 7.9 39 98-137 7-45 (216)
307 3f4s_A Alpha-DSBA1, putative u 70.2 5.9 0.0002 33.2 5.2 42 96-137 38-81 (226)
308 2axo_A Hypothetical protein AT 67.8 20 0.0007 31.2 8.2 61 98-161 43-122 (270)
309 4f9z_D Endoplasmic reticulum r 65.3 17 0.00058 29.8 7.0 56 97-154 131-186 (227)
310 2jad_A Yellow fluorescent prot 57.8 21 0.00073 32.4 6.7 58 96-161 260-326 (362)
311 3kzq_A Putative uncharacterize 56.7 22 0.00075 28.6 6.1 56 100-156 4-75 (208)
312 2x8g_A Thioredoxin glutathione 53.6 16 0.00056 34.5 5.5 18 104-121 23-40 (598)
313 4gxt_A A conserved functionall 52.0 12 0.00043 33.9 4.1 40 116-155 223-262 (385)
314 3ghf_A Septum site-determining 51.1 17 0.00057 27.6 4.1 38 117-154 61-98 (120)
315 4as2_A Phosphorylcholine phosp 46.5 15 0.00051 32.7 3.7 34 117-150 146-179 (327)
316 2imf_A HCCA isomerase, 2-hydro 44.9 71 0.0024 25.3 7.4 34 101-137 3-36 (203)
317 3fvv_A Uncharacterized protein 44.9 41 0.0014 26.6 5.9 38 117-154 95-132 (232)
318 1l6r_A Hypothetical protein TA 42.2 54 0.0018 26.7 6.3 39 119-157 27-65 (227)
319 1w41_A 50S ribosomal protein L 41.7 60 0.002 23.4 5.8 53 122-174 24-80 (101)
320 3j21_Z 50S ribosomal protein L 41.2 44 0.0015 24.1 5.0 54 121-174 22-79 (99)
321 2obb_A Hypothetical protein; s 40.3 39 0.0013 26.3 4.9 42 119-160 29-73 (142)
322 2gjf_A Designed protein; proca 40.1 29 0.00097 23.7 3.6 28 133-160 50-77 (78)
323 2xry_A Deoxyribodipyrimidine p 39.7 98 0.0034 28.6 8.3 58 115-173 90-156 (482)
324 1s2w_A Phosphoenolpyruvate pho 39.3 1.2E+02 0.0041 26.5 8.4 60 116-175 169-236 (295)
325 2wm8_A MDP-1, magnesium-depend 38.1 39 0.0013 26.3 4.6 38 117-154 71-109 (187)
326 2p9j_A Hypothetical protein AQ 37.4 54 0.0018 24.6 5.2 35 120-154 42-76 (162)
327 1dnp_A DNA photolyase; DNA rep 36.0 71 0.0024 29.6 6.7 64 97-161 28-103 (471)
328 2fpr_A Histidine biosynthesis 35.8 33 0.0011 26.7 3.8 40 117-156 45-99 (176)
329 3pe6_A Monoglyceride lipase; a 34.8 66 0.0022 25.5 5.6 59 75-138 16-77 (303)
330 3umv_A Deoxyribodipyrimidine p 34.5 99 0.0034 29.1 7.5 63 97-161 68-137 (506)
331 2pib_A Phosphorylated carbohyd 32.9 65 0.0022 24.4 5.1 35 120-154 90-124 (216)
332 2wq7_A RE11660P; lyase-DNA com 32.3 76 0.0026 30.0 6.4 45 115-160 87-131 (543)
333 2l69_A Rossmann 2X3 fold prote 32.2 1.5E+02 0.0052 21.8 6.9 54 117-170 36-94 (134)
334 3hug_B Probable conserved memb 31.8 23 0.0008 26.6 2.1 23 107-129 52-74 (108)
335 2j07_A Deoxyribodipyrimidine p 31.2 75 0.0026 28.9 5.9 57 115-172 50-115 (420)
336 3u5e_c L32, RP73, YL38, 60S ri 30.7 84 0.0029 22.8 5.1 53 122-174 30-86 (105)
337 3a1c_A Probable copper-exporti 30.4 72 0.0025 26.7 5.4 52 121-172 170-224 (287)
338 2gmw_A D,D-heptose 1,7-bisphos 29.6 76 0.0026 25.2 5.1 40 117-156 53-107 (211)
339 1sji_A Calsequestrin 2, calseq 28.9 1.4E+02 0.0047 25.8 7.1 64 98-161 246-315 (350)
340 4a18_G RPL30; ribosome, eukary 28.8 1.1E+02 0.0037 22.2 5.4 53 122-174 30-86 (104)
341 3e58_A Putative beta-phosphogl 28.8 72 0.0025 24.1 4.7 37 118-154 93-129 (214)
342 1nnl_A L-3-phosphoserine phosp 28.4 46 0.0016 26.2 3.6 37 119-155 91-127 (225)
343 3cpq_A 50S ribosomal protein L 28.3 1.1E+02 0.0039 22.3 5.5 52 123-174 30-85 (110)
344 3mmz_A Putative HAD family hyd 28.2 84 0.0029 24.3 5.1 65 77-154 13-79 (176)
345 1vjq_A Designed protein; struc 28.0 44 0.0015 22.7 3.0 28 133-160 42-69 (79)
346 2r47_A Uncharacterized protein 27.9 31 0.0011 27.7 2.3 85 73-162 63-147 (157)
347 1wr8_A Phosphoglycolate phosph 27.9 1.1E+02 0.0037 24.5 5.9 40 119-158 25-64 (231)
348 4ev1_A Anabena TIC22; TIC22 fo 26.4 79 0.0027 27.2 4.8 66 70-142 9-89 (252)
349 1k1e_A Deoxy-D-mannose-octulos 26.0 1.1E+02 0.0037 23.6 5.4 34 121-154 42-75 (180)
350 1owl_A Photolyase, deoxyribodi 26.0 88 0.003 29.0 5.5 46 115-161 55-100 (484)
351 4hoj_A REGF protein; GST, glut 25.4 27 0.00094 27.7 1.7 60 101-167 4-64 (210)
352 3v7e_A Ribosome-associated pro 25.4 1.5E+02 0.0052 20.4 5.5 51 123-174 20-74 (82)
353 2pr7_A Haloacid dehalogenase/e 25.4 38 0.0013 24.1 2.4 39 115-153 19-57 (137)
354 3ibs_A Conserved hypothetical 24.9 1.5E+02 0.0051 23.2 6.1 22 119-140 128-149 (218)
355 3iz5_f 60S ribosomal protein L 24.8 1.3E+02 0.0044 22.3 5.2 52 123-174 35-90 (112)
356 3nuq_A Protein SSM1, putative 24.7 2.2E+02 0.0077 23.0 7.4 38 117-154 145-184 (282)
357 3ib6_A Uncharacterized protein 24.7 77 0.0026 24.6 4.2 38 117-154 37-77 (189)
358 3ira_A Conserved protein; meth 24.5 97 0.0033 24.6 4.8 36 215-251 105-143 (173)
359 1np7_A DNA photolyase; protein 24.4 84 0.0029 29.1 5.0 46 114-160 62-107 (489)
360 4hyl_A Stage II sporulation pr 23.9 1.7E+02 0.0059 20.6 5.8 61 99-162 44-106 (117)
361 2jya_A AGR_C_3324P, uncharacte 23.8 57 0.0019 24.4 3.0 28 134-161 54-81 (106)
362 3m9l_A Hydrolase, haloacid deh 23.8 94 0.0032 23.9 4.6 35 120-154 76-110 (205)
363 2r4v_A XAP121, chloride intrac 23.6 87 0.003 25.5 4.5 51 105-162 26-77 (247)
364 3eoo_A Methylisocitrate lyase; 23.2 3.3E+02 0.011 23.7 8.4 74 100-175 156-237 (298)
365 2q1z_B Anti-sigma factor CHRR, 22.9 47 0.0016 27.0 2.6 21 107-127 33-53 (195)
366 2j4d_A Cryptochrome 3, cryptoc 22.9 1E+02 0.0035 29.0 5.3 45 115-160 98-142 (525)
367 2hjp_A Phosphonopyruvate hydro 22.4 2.3E+02 0.0078 24.6 7.2 59 116-174 165-232 (290)
368 3s6j_A Hydrolase, haloacid deh 22.4 81 0.0028 24.4 3.9 36 119-154 96-131 (233)
369 2ze3_A DFA0005; organic waste 22.2 3.6E+02 0.012 23.1 8.4 61 115-175 166-230 (275)
370 1nrw_A Hypothetical protein, h 22.0 1.7E+02 0.006 24.1 6.2 40 121-160 28-67 (288)
371 3um9_A Haloacid dehalogenase, 21.9 1.1E+02 0.0038 23.6 4.7 36 119-154 101-136 (230)
372 4hde_A SCO1/SENC family lipopr 21.7 41 0.0014 26.1 1.9 38 77-123 24-62 (170)
373 2nyv_A Pgpase, PGP, phosphogly 21.7 1.1E+02 0.0036 24.1 4.6 36 119-154 88-123 (222)
374 3hju_A Monoglyceride lipase; a 21.6 1.6E+02 0.0056 24.1 5.9 61 73-138 32-95 (342)
375 3n1u_A Hydrolase, HAD superfam 21.0 1.1E+02 0.0038 24.0 4.5 32 123-154 55-86 (191)
376 2e0i_A 432AA long hypothetical 21.0 1.6E+02 0.0055 27.0 6.2 64 96-162 26-98 (440)
377 2o2x_A Hypothetical protein; s 20.9 59 0.002 25.9 2.8 40 117-156 59-113 (218)
378 1zlp_A PSR132, petal death pro 20.9 3.3E+02 0.011 23.9 8.0 59 115-175 187-255 (318)
379 2no4_A (S)-2-haloacid dehaloge 20.8 1.2E+02 0.0041 23.9 4.7 36 119-154 110-145 (240)
380 2r8e_A 3-deoxy-D-manno-octulos 20.8 1E+02 0.0035 23.9 4.2 33 122-154 61-93 (188)
381 3m1y_A Phosphoserine phosphata 20.8 57 0.002 25.2 2.7 36 119-154 80-115 (217)
382 3kd3_A Phosphoserine phosphohy 20.7 80 0.0027 24.0 3.5 36 119-154 87-122 (219)
383 3ih1_A Methylisocitrate lyase; 20.6 3.9E+02 0.013 23.3 8.3 60 116-175 174-241 (305)
384 1v2a_A Glutathione transferase 20.5 1.3E+02 0.0044 23.4 4.8 56 103-163 3-59 (210)
385 2hsz_A Novel predicted phospha 20.4 1.1E+02 0.0039 24.4 4.6 33 122-154 122-154 (243)
386 3dex_A SAV_2001; alpha-beta pr 20.4 41 0.0014 25.2 1.6 33 215-251 53-85 (107)
387 3mdq_A Exopolyphosphatase; str 20.4 1.6E+02 0.0056 25.5 5.8 59 115-173 58-124 (315)
388 2jvx_A NF-kappa-B essential mo 20.3 5.5 0.00019 22.8 -2.5 21 108-128 5-25 (28)
389 3e8m_A Acylneuraminate cytidyl 20.3 1E+02 0.0035 23.0 4.0 33 122-154 39-71 (164)
390 4ex6_A ALNB; modified rossman 20.2 90 0.0031 24.4 3.8 34 121-154 111-144 (237)
391 3mn1_A Probable YRBI family ph 20.2 1.2E+02 0.0039 23.8 4.4 33 122-154 54-86 (189)
392 3fmw_A Oxygenase; mithramycin, 20.1 32 0.0011 32.6 1.2 37 68-104 444-480 (570)
393 2ka5_A Putative anti-sigma fac 20.1 1.8E+02 0.006 21.2 5.2 61 98-161 53-115 (125)
No 1
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.97 E-value=9.1e-32 Score=220.28 Aligned_cols=152 Identities=14% Similarity=0.168 Sum_probs=129.6
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~ 148 (252)
+++|+.||+|+|.|.+|+.++|+++ +++++||.|++++|||+|+.|+++|+++++++++.|+.+|+|+.|+++.+++|+
T Consensus 4 l~vG~~aPdF~l~~~~G~~~~l~d~-~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~ 82 (157)
T 4g2e_A 4 VEIGELAPDFELPDTELKKVKLSAL-KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFK 82 (157)
T ss_dssp CCTTSBCCCCEEEBTTSCEEEGGGG-TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCcCeEeECCCCCEEeHHHH-CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHH
Confidence 6899999999999999999999998 566788888889999999999999999999999999999999999999999999
Q ss_pred HHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCeE
Q 025474 149 EQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNI 228 (252)
Q Consensus 149 e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~I 228 (252)
++++++||+++|+++++.++||+...... ..+.....+++||||++ |+|
T Consensus 83 ~~~~~~~p~l~D~~~~v~~~ygv~~~~~~------------------------------~~~~~~~~p~tflID~~-G~I 131 (157)
T 4g2e_A 83 EHNKLNFTILSDYNREVVKKYNVAWEFPA------------------------------LPGYVLAKRAVFVIDKE-GKV 131 (157)
T ss_dssp HHTTCCSEEEECTTSHHHHHTTCEEECTT------------------------------STTCEEECEEEEEECTT-SBE
T ss_pred HHcCCcEEEEEcCCcHHHHHcCCcccccc------------------------------CCCcceeeeeEEEECCC-CEE
Confidence 99999999999999999999998654210 01122457799999998 699
Q ss_pred EEEEeCCCCCCCCCHHHHHHHhhC
Q 025474 229 SYIHRDKEAGDDPDIQDILKACCS 252 (252)
Q Consensus 229 ~~~h~~~~~~D~p~~~eIL~al~~ 252 (252)
+|.|+..++.++++++||++++++
T Consensus 132 ~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 132 RYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp EEEEEESSTTCCCCHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999998863
No 2
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.97 E-value=3.1e-32 Score=225.18 Aligned_cols=151 Identities=12% Similarity=0.206 Sum_probs=135.0
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCcc-CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLW-KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~-~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f 147 (252)
+++|+.||+|+|.|.+|+.++|+++. +++++||+|||++|||+|+.|++.|++++++|++.|+.+|+|+.|+++.+++|
T Consensus 5 l~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 84 (164)
T 4gqc_A 5 VELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKF 84 (164)
T ss_dssp CCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHH
T ss_pred ccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHH
Confidence 58999999999999999999999986 45678999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCe
Q 025474 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~ 227 (252)
+++++++||+++|+++++.++||+..... .+. .+...+++||||++ |+
T Consensus 85 ~~~~~~~fp~l~D~~~~v~~~ygv~~~~~----------------~~~---------------~~~~~p~tflID~~-G~ 132 (164)
T 4gqc_A 85 KDENRLAFNLLSDYNREVIKLYNVYHEDL----------------KGL---------------KMVAKRAVFIVKPD-GT 132 (164)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCEEEEE----------------TTE---------------EEEECCEEEEECTT-SB
T ss_pred HHhcCcccceeecCchHHHHHcCCccccc----------------ccC---------------cCCeeeEEEEECCC-CE
Confidence 99999999999999999999999854211 000 01346789999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 228 ISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 228 I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
|+|.|+..++.++++++|+|++++
T Consensus 133 I~~~~~~~~~~~~~~~~eil~~l~ 156 (164)
T 4gqc_A 133 VAYKWVTDNPLNEPDYDEVVREAN 156 (164)
T ss_dssp EEEEEECSCTTCCCCHHHHHHHHH
T ss_pred EEEEEEeCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999875
No 3
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.96 E-value=2.9e-28 Score=203.95 Aligned_cols=153 Identities=12% Similarity=0.144 Sum_probs=131.9
Q ss_pred CccccCCCCCcEEe-cCCCCeEeCCCccCCCcEEEEEEcCCCCHhHH-HHHHHHHHcHHHHHhCCCEEEE-EeCCCHHHH
Q 025474 68 SEDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGVALVL-IGPGSVEQA 144 (252)
Q Consensus 68 ~~~~g~~ap~f~l~-d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~-~el~~L~~~~~~l~~~Gv~vV~-Vs~~~~~~~ 144 (252)
++++|+.||+|++. |.+|+.++|+++++++++||+|||++|||.|+ +|++.|++++++|+++|++||+ |+.++++..
T Consensus 14 ~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~ 93 (173)
T 3mng_A 14 PIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVT 93 (173)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHH
T ss_pred CCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHH
Confidence 46889999999999 99999999999777788999999999999999 5999999999999999999997 999999999
Q ss_pred HHHHHHhCCC--ceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEe
Q 025474 145 RTFSEQTKFK--GEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 222 (252)
Q Consensus 145 ~~f~e~~~~~--fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid 222 (252)
++|+++++++ ||+++|++.++.++||+....... + .. |+....+++||||
T Consensus 94 ~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~--~---------~~-----------------g~~~~~r~tfvID 145 (173)
T 3mng_A 94 GEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLV--S---------IF-----------------GNRRLKRFSMVVQ 145 (173)
T ss_dssp HHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTH--H---------HH-----------------SSCCBCCEEEEEE
T ss_pred HHHHHHhCCCCceEEEECCChHHHHHhCCCcccccc--c---------cc-----------------CCcceEEEEEEEE
Confidence 9999999998 999999999999999987531000 0 00 0113467999999
Q ss_pred CCCCeEEEEEeCCCC--CCCCCHHHHHHHh
Q 025474 223 PGKSNISYIHRDKEA--GDDPDIQDILKAC 250 (252)
Q Consensus 223 ~ggg~I~~~h~~~~~--~D~p~~~eIL~al 250 (252)
+ |+|+|.|++.++ .+..+.++||++|
T Consensus 146 -d-G~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 146 -D-GIVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp -T-TEEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred -C-CEEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 8 699999999875 4678899999875
No 4
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.95 E-value=1.1e-27 Score=202.39 Aligned_cols=151 Identities=10% Similarity=0.101 Sum_probs=131.8
Q ss_pred CccccCCCCCcEEecC--CC-CeEeCCCccCCCcEEEEEEcCCCCHhHHH-HHHHHHHcHHHHHhCCCE-EEEEeCCCHH
Q 025474 68 SEDTKNLLDTVKVYDV--NG-NAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGVA-LVLIGPGSVE 142 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~--~G-~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~-el~~L~~~~~~l~~~Gv~-vV~Vs~~~~~ 142 (252)
.+++|+.+|+|++.|. +| +.++|+++++++++||+|||++|||+|+. |++.|++++++|+++|++ ||+|+.++++
T Consensus 25 ~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~ 104 (184)
T 3uma_A 25 TIAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLH 104 (184)
T ss_dssp CCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHH
T ss_pred cCCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHH
Confidence 4689999999999998 99 99999996577789999999999999999 899999999999999999 9999999999
Q ss_pred HHHHHHHHhCCC--ceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEE
Q 025474 143 QARTFSEQTKFK--GEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 220 (252)
Q Consensus 143 ~~~~f~e~~~~~--fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fV 220 (252)
..++|+++++++ ||+++|++.++.++||+...... .|+ | ....+++||
T Consensus 105 ~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~---------------~g~---------g------~~~~r~tfi 154 (184)
T 3uma_A 105 VMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSA---------------GTL---------G------IRSKRYSML 154 (184)
T ss_dssp HHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGG---------------GTC---------E------EEECCEEEE
T ss_pred HHHHHHHHhCCCCceEEEEcCchHHHHHcCCceeccc---------------cCC---------c------ccceeEEEE
Confidence 999999999999 99999999999999998754210 010 0 123568999
Q ss_pred EeCCCCeEEEEEeCCCCCC--CCCHHHHHHHh
Q 025474 221 AGPGKSNISYIHRDKEAGD--DPDIQDILKAC 250 (252)
Q Consensus 221 id~ggg~I~~~h~~~~~~D--~p~~~eIL~al 250 (252)
|+ + |+|+|.|++.++++ .++.+++|+.|
T Consensus 155 Id-d-G~I~~~~~~~~~g~~~~~~~~~vL~~L 184 (184)
T 3uma_A 155 VE-D-GVVKALNIEESPGQATASGAAAMLELL 184 (184)
T ss_dssp EE-T-TEEEEEEECSSTTCCSTTSHHHHHHHC
T ss_pred EC-C-CEEEEEEEeCCCCCCcCCCHHHHHhhC
Confidence 97 6 69999999987765 89999999875
No 5
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.94 E-value=3.4e-26 Score=187.57 Aligned_cols=145 Identities=13% Similarity=0.156 Sum_probs=129.2
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHH
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f 147 (252)
.+++|+.+|+|++.|.+|+.++|+++ +++++||.|+++.|||.|+.+++.|++++++ .|++||+|+.|+.+.+++|
T Consensus 19 ~l~~G~~aP~f~l~~~~G~~~~l~~~-~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~~~~~~~ 94 (166)
T 3p7x_A 19 QINEGDFAPDFTVLDNDLNQVTLADY-AGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLPFAQKRW 94 (166)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCHHHHHHH
T ss_pred cCCCCCCCCCeEEEcCCCCEEeHHHh-CCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCHHHHHHH
Confidence 36789999999999999999999998 5667788887799999999999999998877 8999999999999999999
Q ss_pred HHHhCC-CceeeecC-ChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCC
Q 025474 148 SEQTKF-KGEVYADP-NHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 225 (252)
Q Consensus 148 ~e~~~~-~fpll~Dp-~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~gg 225 (252)
++++++ +|++++|+ +.+++++||+.... .+...+.+||||++
T Consensus 95 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~-----------------------------------~g~~~p~~~liD~~- 138 (166)
T 3p7x_A 95 CASAGLDNVITLSDHRDLSFGENYGVVMEE-----------------------------------LRLLARAVFVLDAD- 138 (166)
T ss_dssp HHHHTCSSCEEEECTTTCHHHHHHTCEETT-----------------------------------TTEECCEEEEECTT-
T ss_pred HHHcCCCceEEccCCchhHHHHHhCCcccc-----------------------------------CCceeeEEEEECCC-
Confidence 999999 89999999 99999999985421 00235689999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhhC
Q 025474 226 SNISYIHRDKEAGDDPDIQDILKACCS 252 (252)
Q Consensus 226 g~I~~~h~~~~~~D~p~~~eIL~al~~ 252 (252)
|+|+|.|+..+..++++++++++++++
T Consensus 139 G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 139 NKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp CBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred CeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 699999999999999999999999864
No 6
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.94 E-value=2.3e-26 Score=188.62 Aligned_cols=149 Identities=14% Similarity=0.148 Sum_probs=127.9
Q ss_pred ccccCCCCCcEEe--cCCC--CeEeCCCccCCCcEEEEEEcCCCCHhHH-HHHHHHHHcHHHHHhCCCE-EEEEeCCCHH
Q 025474 69 EDTKNLLDTVKVY--DVNG--NAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGVA-LVLIGPGSVE 142 (252)
Q Consensus 69 ~~~g~~ap~f~l~--d~~G--~~v~ls~l~~~~~vvlvF~R~~~Cp~C~-~el~~L~~~~~~l~~~Gv~-vV~Vs~~~~~ 142 (252)
+++|+.+|+|++. |.+| +.++|+++++++++||.|++++|||.|+ .|+++|++++++|++.|++ ||+|+.++++
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~ 83 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPF 83 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHH
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
Confidence 5789999999986 8999 9999999546777888888899999999 9999999999999999999 9999999999
Q ss_pred HHHHHHHHhCC--CceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEE
Q 025474 143 QARTFSEQTKF--KGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 220 (252)
Q Consensus 143 ~~~~f~e~~~~--~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fV 220 (252)
.+++|.+++++ +|++++|++.++.++||+..... + .|+ | .+..+++||
T Consensus 84 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~----~-----------~g~---------~------~~~~p~~~v 133 (162)
T 1tp9_A 84 VMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQ----E-----------KGL---------G------TRSRRFALL 133 (162)
T ss_dssp HHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEET----T-----------TTS---------E------EEECCEEEE
T ss_pred HHHHHHHhcCCCCCeEEEECCCchHHHHcCcccccc----c-----------CCC---------C------ccceeEEEE
Confidence 99999999999 89999999999999999864310 0 010 0 124678999
Q ss_pred EeCCCCeEEEEEeCCCCCCCC--CHHHHHHHh
Q 025474 221 AGPGKSNISYIHRDKEAGDDP--DIQDILKAC 250 (252)
Q Consensus 221 id~ggg~I~~~h~~~~~~D~p--~~~eIL~al 250 (252)
|| + |+|+|.|++. +++++ +.++||++|
T Consensus 134 id-~-G~i~~~~~~~-~~~~~~~~~~~vl~~l 162 (162)
T 1tp9_A 134 VD-D-LKVKAANIEG-GGEFTVSSAEDILKDL 162 (162)
T ss_dssp EE-T-TEEEEEEECS-SSCCSSCSHHHHHTTC
T ss_pred EE-C-CEEEEEEeeC-CCCCccCCHHHHHhhC
Confidence 99 7 6999999998 88887 899999864
No 7
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.94 E-value=1.3e-25 Score=186.12 Aligned_cols=150 Identities=12% Similarity=0.121 Sum_probs=128.1
Q ss_pred ccccCCCCCcEEe-cCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHH-HHHHHHHcHHHHHhCCC-EEEEEeCCCHHHHH
Q 025474 69 EDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGV-ALVLIGPGSVEQAR 145 (252)
Q Consensus 69 ~~~g~~ap~f~l~-d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~-el~~L~~~~~~l~~~Gv-~vV~Vs~~~~~~~~ 145 (252)
+++|+.+|+|++. |.+|+.++|+++++++++||+|||++|||.|+. |++.|++++++|++.|+ +||+|+.++.+.++
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~ 82 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMD 82 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHH
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHH
Confidence 5789999999999 999999999998777889999999999999999 99999999999999999 99999999999999
Q ss_pred HHHHHhCCC--ceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeC
Q 025474 146 TFSEQTKFK--GEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 146 ~f~e~~~~~--fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ 223 (252)
+|+++++++ ||+++|++.++.++||+..... .. .| .....+.+||| +
T Consensus 83 ~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~-----~~---------~g----------------~~~~~p~t~lI-~ 131 (167)
T 2wfc_A 83 AWGKAHGADDKVQMLADPGGAFTKAVDMELDLS-----AV---------LG----------------NVRSKRYSLVI-E 131 (167)
T ss_dssp HHHHHTTCTTTSEEEECTTSHHHHHTTCEECCH-----HH---------HS----------------SCEECCEEEEE-E
T ss_pred HHHHhcCCCcceEEEECCCCcHHHHcCCccccc-----cc---------cC----------------cccceEEEEEE-e
Confidence 999999999 9999999999999999864310 00 01 01235789999 7
Q ss_pred CCCeEEEEEeCCCCC--CCCCHHHHHHHh
Q 025474 224 GKSNISYIHRDKEAG--DDPDIQDILKAC 250 (252)
Q Consensus 224 ggg~I~~~h~~~~~~--D~p~~~eIL~al 250 (252)
+ |+|+|.+++.++. +-...+.+|+.+
T Consensus 132 ~-G~I~~~~~~~~~~~~~~~~~~~~~~~~ 159 (167)
T 2wfc_A 132 D-GVVTKVNVEPDGKGLTCSLAPNILSQL 159 (167)
T ss_dssp T-TEEEEEEECTTSSSSSTTSHHHHHHHH
T ss_pred C-CEEEEEEecCCCCcceeccHHHHHHHh
Confidence 7 6999999987664 446677777765
No 8
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.94 E-value=1.2e-25 Score=183.73 Aligned_cols=144 Identities=8% Similarity=0.141 Sum_probs=125.4
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~ 148 (252)
+.+|+.+|+|++.|.+|+.++++++ +++++||.|+.++||+.|+.+++.|+++++++ .|+++|+|+.|+.+.+++|.
T Consensus 16 ~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~~~~ 92 (163)
T 1psq_A 16 LQVGDKALDFSLTTTDLSKKSLADF-DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQKRWC 92 (163)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCCCEEEEcCCCcEeeHHHh-CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHHHHH
Confidence 5789999999999999999999998 44444444444699999999999999999998 79999999999999999999
Q ss_pred HHhCC-Cceeeec-CChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCC
Q 025474 149 EQTKF-KGEVYAD-PNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 149 e~~~~-~fpll~D-p~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg 226 (252)
+++++ +|++++| ++.+++++||+.... .+...+.+||||++ |
T Consensus 93 ~~~~~~~~~~l~D~~~~~~~~~~gv~~~~-----------------------------------~g~~~p~~~liD~~-G 136 (163)
T 1psq_A 93 GAEGLDNAIMLSDYFDHSFGRDYALLINE-----------------------------------WHLLARAVFVLDTD-N 136 (163)
T ss_dssp HHHTCTTSEEEECTTTCHHHHHHTCBCTT-----------------------------------TCSBCCEEEEECTT-C
T ss_pred HhcCCCCcEEecCCchhHHHHHhCCcccc-----------------------------------CCceEEEEEEEcCC-C
Confidence 99999 9999999 899999999985421 00124689999998 6
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 227 NISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 227 ~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+|++.|.+.+..++++.++++++++
T Consensus 137 ~i~~~~~g~~~~~~~~~~~~l~~l~ 161 (163)
T 1psq_A 137 TIRYVEYVDNINSEPNFEAAIAAAK 161 (163)
T ss_dssp BEEEEEECSBTTSCCCHHHHHHHHH
T ss_pred eEEEEEecCCcCCCCCHHHHHHHHH
Confidence 9999999999999999999999886
No 9
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.93 E-value=9.4e-26 Score=187.41 Aligned_cols=150 Identities=15% Similarity=0.190 Sum_probs=125.1
Q ss_pred ccccCCCCCcEEecC----CC-----CeEeCCCccCCCcEEEEEEcCCCCHhHHHH-HHHHHHcHHHHHhCCCE-EEEEe
Q 025474 69 EDTKNLLDTVKVYDV----NG-----NAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVA-LVLIG 137 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~----~G-----~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~Gv~-vV~Vs 137 (252)
..+|+.+|+|++.+. +| +.++|+++++++++||+|||++|||+|+.| +++|++++++|+++|++ ||+|+
T Consensus 7 ~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is 86 (171)
T 2pwj_A 7 TDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVA 86 (171)
T ss_dssp ---CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEE
T ss_pred ccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 456779999999998 57 999999976777899999999999999999 99999999999999999 99999
Q ss_pred CCCHHHHHHHHHHhCC--CceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCcccc
Q 025474 138 PGSVEQARTFSEQTKF--KGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 215 (252)
Q Consensus 138 ~~~~~~~~~f~e~~~~--~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~ 215 (252)
.++.+.+++|.+++++ +||+++|++.++.++||+...... .++ | ....
T Consensus 87 ~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~---------------~~~---------g------~~~~ 136 (171)
T 2pwj_A 87 INDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSA---------------GLL---------G------IRSE 136 (171)
T ss_dssp SSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTT---------------TTC---------C------EEEC
T ss_pred CCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCcccccc---------------ccC---------C------cccc
Confidence 9999999999999996 799999999999999998642110 000 0 0123
Q ss_pred ceEEEEeCCCCeEEEEEeCCCCCC--CCCHHHHHHHh
Q 025474 216 GGIIVAGPGKSNISYIHRDKEAGD--DPDIQDILKAC 250 (252)
Q Consensus 216 GG~fVid~ggg~I~~~h~~~~~~D--~p~~~eIL~al 250 (252)
+.+|+|+ + |+|+|.|++.++++ +.+.++||++|
T Consensus 137 ~~t~~I~-~-G~I~~~~~~~~~~~~~~~~~~~il~~l 171 (171)
T 2pwj_A 137 RWSAYVV-D-GKVKALNVEESPSDVKVSGAETILGQI 171 (171)
T ss_dssp CEEEEEE-T-TEEEEEEECSSTTCCSSSSHHHHHHHC
T ss_pred eeEEEEE-C-CEEEEEEeecCCCCCcccCHHHHHhcC
Confidence 4578888 6 69999999998875 67999999875
No 10
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.93 E-value=1.4e-25 Score=184.45 Aligned_cols=146 Identities=12% Similarity=0.166 Sum_probs=126.6
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~ 148 (252)
+.+|+.+|+|++.|.+|+.++++++ +++++||.|++++|||.|+.+++.|++++++| .|++||+|+.|+.+.+++|+
T Consensus 21 l~~g~~~P~f~l~~~~G~~~~l~~~-~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~ 97 (171)
T 2yzh_A 21 LKVGDRAPEAVVVTKDLQEKIVGGA-KDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQKRFC 97 (171)
T ss_dssp CCTTSBCCCEEEEETTSCEEEESSC-CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCcCCceEEECCCCCEeeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHHHHHH
Confidence 5789999999999999999999998 45566666656899999999999999999998 79999999999999999999
Q ss_pred HHhCC-Cceeeec-CChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCC
Q 025474 149 EQTKF-KGEVYAD-PNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 149 e~~~~-~fpll~D-p~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg 226 (252)
+++++ +|++++| ++.++ ++||+...... ..++..+.+||||++ |
T Consensus 98 ~~~~~~~~~~l~D~~~~~~-~~~gv~~~~~~--------------------------------~~g~~~p~~~liD~~-G 143 (171)
T 2yzh_A 98 ESFNIQNVTVASDFRYRDM-EKYGVLIGEGA--------------------------------LKGILARAVFIIDKE-G 143 (171)
T ss_dssp HHTTCCSSEEEECTTTCGG-GGGTCBBCSST--------------------------------TTTSBCCEEEEECTT-S
T ss_pred HHcCCCCeEEeecCccCcH-HHhCCEecccc--------------------------------cCCceeeEEEEEcCC-C
Confidence 99999 8999999 89999 99998643100 001236789999998 6
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 227 NISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 227 ~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+|++.|.+.+..++++.++++++++
T Consensus 144 ~i~~~~~~~~~~~~~~~~~ll~~l~ 168 (171)
T 2yzh_A 144 KVAYVQLVPEITEEPNYDEVVNKVK 168 (171)
T ss_dssp BEEEEEECSBTTSCCCCHHHHHHHH
T ss_pred eEEEEEeCCCcCCCCCHHHHHHHHH
Confidence 9999999988999999999999886
No 11
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.93 E-value=1.9e-25 Score=181.40 Aligned_cols=153 Identities=12% Similarity=0.077 Sum_probs=126.1
Q ss_pred CCCccccCCCCCcE--EecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH
Q 025474 66 SVSEDTKNLLDTVK--VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 66 ~~~~~~g~~ap~f~--l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~ 143 (252)
+..+.+|+.+|+|+ +.|.+|++++++++ +++++||.|+.++|||.|+.+++.|++++++|++.|++||+|+.|+++.
T Consensus 4 m~~l~~G~~~P~f~~~l~~~~G~~~~l~~~-~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~ 82 (163)
T 3gkn_A 4 MTDAVLELPAATFDLPLSLSGGTQTTLRAH-AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKS 82 (163)
T ss_dssp CCCCCCCCCGGGGGCCEECSTTCEECSGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred ccccccCCcCCCccccccCCCCCEEEHHHh-CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 44578999999999 99999999999998 4455666665569999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeC
Q 025474 144 ARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 144 ~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ 223 (252)
+++|+++++++|++++|++.+++++||+..... .+ | .... -..+.+||||+
T Consensus 83 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~-~~--------------~------~~~~--------~~~p~~~lid~ 133 (163)
T 3gkn_A 83 HDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKN-MY--------------G------KQVL--------GIERSTFLLSP 133 (163)
T ss_dssp HHHHHHHHCCSSCEEECTTCHHHHHTTCEEEEE-ET--------------T------EEEE--------EECCEEEEECT
T ss_pred HHHHHHHhCCCceEEECCcHHHHHHhCCccccc-cc--------------c------cccc--------CcceEEEEECC
Confidence 999999999999999999999999999865321 00 0 0000 02678999999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 224 GKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 224 ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+ |+|++.|.+ ......+++++++++
T Consensus 134 ~-G~i~~~~~~--~~~~~~~~~il~~l~ 158 (163)
T 3gkn_A 134 E-GQVVQAWRK--VKVAGHADAVLAALK 158 (163)
T ss_dssp T-SCEEEEECS--CCSTTHHHHHHHHHH
T ss_pred C-CeEEEEEcC--CCcccCHHHHHHHHH
Confidence 8 699999944 444567889988775
No 12
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.93 E-value=9.7e-26 Score=187.89 Aligned_cols=151 Identities=11% Similarity=0.073 Sum_probs=126.7
Q ss_pred CccccCC----CCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH
Q 025474 68 SEDTKNL----LDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 68 ~~~~g~~----ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~ 143 (252)
.+++|+. +|+|++.|.+|+.++|+++ +++++||+|++++||+.|+.+++.|++++++|++.|++||+|+.|+.+.
T Consensus 20 ~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~-~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~ 98 (179)
T 3ixr_A 20 HMNIGDTLNHSLLNHPLMLSGSTCKTLSDY-TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKS 98 (179)
T ss_dssp SSCTTCBCCHHHHHCCEEEGGGEEECGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHH
T ss_pred ccCcCcccCCcCCCeeEECCCCCEEeHHHH-CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence 4577777 9999999999999999998 4557888888899999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeC
Q 025474 144 ARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 144 ~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ 223 (252)
+++|+++++++|++++|++.+++++||+...... + |.. .....+++||||+
T Consensus 99 ~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~~~-~-------------------------g~~---~~~~~p~~~lID~ 149 (179)
T 3ixr_A 99 HDSFCAKQGFTFPLVSDSDAILCKAFDVIKEKTM-Y-------------------------GRQ---VIGIERSTFLIGP 149 (179)
T ss_dssp HHHHHHHHTCCSCEEECTTCHHHHHTTCEEEECC-C---------------------------C---EEEECCEEEEECT
T ss_pred HHHHHHHcCCceEEEECCchHHHHHcCCcccccc-c-------------------------Ccc---cCCcceEEEEECC
Confidence 9999999999999999999999999998653210 0 000 0013678999999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 224 GKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 224 ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+ |+|++.|. +......+++++++++
T Consensus 150 ~-G~I~~~~~--~~~~~~~~~~il~~l~ 174 (179)
T 3ixr_A 150 T-HRIVEAWR--QVKVPGHAEEVLNKLK 174 (179)
T ss_dssp T-SBEEEEEC--SCCSTTHHHHHHHHHH
T ss_pred C-CEEEEEEc--CCCCCCCHHHHHHHHH
Confidence 8 69999994 4456677889988775
No 13
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.93 E-value=9.9e-26 Score=195.77 Aligned_cols=146 Identities=10% Similarity=0.102 Sum_probs=125.6
Q ss_pred CccccCCCCCcE----EecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH
Q 025474 68 SEDTKNLLDTVK----VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 68 ~~~~g~~ap~f~----l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~ 143 (252)
..++|++||+|+ +.|.+|+.|+|+|+ +++++||+||+..|||.|..|+++|++++++|++.|++||+||.|+...
T Consensus 25 ~~~vG~~APdF~~~a~l~d~~g~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~s 103 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPNGSFKKISLSSY-KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYA 103 (219)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccccCCcCCCCcccccccCCCCcEEehHHh-CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhh
Confidence 358999999999 45788999999998 5678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-------CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccc
Q 025474 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 144 ~~~f~e~~-------~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~G 216 (252)
.++|+++. +++||+++|+++++.++||+..... +....
T Consensus 104 h~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~-----------------------------------g~~~R 148 (219)
T 3tue_A 104 HLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQ-----------------------------------GVAYR 148 (219)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTT-----------------------------------TEECE
T ss_pred HHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCC-----------------------------------CeeEE
Confidence 99999764 6899999999999999999864310 12356
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 217 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 217 G~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
++||||++ |+|++.++....-. ..++|+|++++
T Consensus 149 ~tFiIDp~-g~Ir~~~~~~~~~g-r~~~EvLr~l~ 181 (219)
T 3tue_A 149 GLFIIDPH-GMLRQITVNDMPVG-RSVEEVLRLLE 181 (219)
T ss_dssp EEEEECTT-SBEEEEEEECTTCC-CCHHHHHHHHH
T ss_pred EEEEECCC-CeEEEEEEecCCCC-CCHHHHHHHHH
Confidence 89999998 69999997644433 37889998875
No 14
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.93 E-value=1.3e-25 Score=184.25 Aligned_cols=147 Identities=12% Similarity=0.178 Sum_probs=126.7
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~ 148 (252)
+.+|+.+|+|++.|.+|+.++|+++ +++++||.|++++|||.|+.+++.|+++++++ .|++||+|+.|+.+.+++|+
T Consensus 17 ~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~ 93 (165)
T 1q98_A 17 PQVGEIVENFILVGNDLADVALNDF-ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQARFC 93 (165)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHHTTCT
T ss_pred CCCCCCCCCeEEECCCCCEEehHHh-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHHHHHH
Confidence 5789999999999999999999998 45556665656899999999999999999999 79999999999999999999
Q ss_pred HHhCC-CceeeecC-ChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCC
Q 025474 149 EQTKF-KGEVYADP-NHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 149 e~~~~-~fpll~Dp-~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg 226 (252)
+++++ +|++++|+ +.+++++||+..... +. .+...+.+||||++ |
T Consensus 94 ~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~----~~----------------------------~g~~~p~~~liD~~-G 140 (165)
T 1q98_A 94 GAEGIENAKTVSTFRNHALHSQLGVDIQTG----PL----------------------------AGLTSRAVIVLDEQ-N 140 (165)
T ss_dssp TTTTCTTEEEEECTTCTHHHHHTTCEECSS----TT----------------------------TTSBCCEEEEECTT-S
T ss_pred HHcCCCceEEeeccccchHHHHhCceeccc----cc----------------------------CCccceeEEEEcCC-C
Confidence 99999 79999998 899999999864210 00 01235789999998 6
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 227 NISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 227 ~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+|++.|.+.+..++++++++|++++
T Consensus 141 ~i~~~~~~~~~~~~~~~~~~l~~l~ 165 (165)
T 1q98_A 141 NVLHSQLVEEIKEEPNYEAALAVLA 165 (165)
T ss_dssp BEEEEEECSBTTSCCCHHHHHHTTC
T ss_pred EEEEEEeCCCCCCCCCHHHHHHhhC
Confidence 9999999988999999999999874
No 15
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.7e-25 Score=193.99 Aligned_cols=146 Identities=14% Similarity=0.142 Sum_probs=126.4
Q ss_pred CccccCCCCCcEEe---cCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHH
Q 025474 68 SEDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 68 ~~~~g~~ap~f~l~---d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~ 144 (252)
.+++|++||||++. |.+|+.|+|+|+ +++++||.||+..|||.|..|+++|++.+++|++.|++||+||.|+....
T Consensus 22 ~~~VG~~APdF~l~a~~d~~~~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh 100 (216)
T 3sbc_A 22 VAQVQKQAPTFKKTAVVDGVFDEVSLDKY-KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSL 100 (216)
T ss_dssp CCCTTSBCCCCCEEEEETTEEEEECGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred hhhcCCcCCCCCCcceECCCCcEEehHHh-CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhH
Confidence 35899999999865 778899999998 56788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh-------CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccce
Q 025474 145 RTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 145 ~~f~e~~-------~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG 217 (252)
++|++.. +++||+++|+++++.++||+.... .+...+|
T Consensus 101 ~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~-----------------------------------~g~~~R~ 145 (216)
T 3sbc_A 101 LAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEE-----------------------------------EGVALRG 145 (216)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETT-----------------------------------TTEECEE
T ss_pred HHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeecc-----------------------------------CCceeeE
Confidence 9999764 589999999999999999986431 1123579
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+||||++ |+|+|.++....- ...++|+|++++
T Consensus 146 tFiID~~-G~Ir~~~v~~~~~-grn~dEiLr~l~ 177 (216)
T 3sbc_A 146 LFIIDPK-GVIRHITINDLPV-GRNVDEALRLVE 177 (216)
T ss_dssp EEEECTT-SBEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred EEEECCC-CeEEEEEEcCCCC-CCCHHHHHHHHH
Confidence 9999998 6999999875554 458999998875
No 16
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.93 E-value=1.4e-25 Score=190.88 Aligned_cols=147 Identities=9% Similarity=0.087 Sum_probs=129.3
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~ 148 (252)
+++|+.+|+|++.|.+|+.++|+++ +++++||.|+++.||+.|+.+++.|+++++++ .|++||+|+.|+.+.+++|+
T Consensus 52 l~~G~~aPdf~l~d~~G~~v~L~d~-~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~~~~~~~ 128 (200)
T 3zrd_A 52 PQIGDKAKDFTLVAKDLSDVALSSF-AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQSRFC 128 (200)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHHHHTTCT
T ss_pred CCCCCCCCCeEEECCCCCEEcHHHh-CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHHHHHHHH
Confidence 6889999999999999999999998 45566776767899999999999999999999 79999999999999999999
Q ss_pred HHhCC-CceeeecC-ChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCC
Q 025474 149 EQTKF-KGEVYADP-NHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 149 e~~~~-~fpll~Dp-~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg 226 (252)
+++++ +|++++|+ +.++.++||+...... ..| ...+++||||++ |
T Consensus 129 ~~~~~~~f~~l~D~~~~~~~~~ygv~~~~~~-------------------------~~g-------~~~p~~~lID~~-G 175 (200)
T 3zrd_A 129 GAEGLSNVITLSTLRGADFKQAYGVAITEGP-------------------------LAG-------LTARAVVVLDGQ-D 175 (200)
T ss_dssp TTTTCTTEEEEETTSCTHHHHHTTCEECSST-------------------------TTT-------SBCCEEEEECTT-S
T ss_pred HHcCCCCceEEecCchHHHHHHhCceeeccc-------------------------CCC-------ccccEEEEECCC-C
Confidence 99999 99999999 9999999998643210 001 135789999998 6
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 227 NISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 227 ~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+|+|.++..+..+.++++++|++++
T Consensus 176 ~I~~~~~~~~~~~~~~~~~~l~~Lk 200 (200)
T 3zrd_A 176 NVIYSELVNEITTEPNYDAALAALK 200 (200)
T ss_dssp BEEEEEECSBTTSCCCHHHHHHHHC
T ss_pred eEEEEEecCCcccCCCHHHHHHhhC
Confidence 9999999999999999999999884
No 17
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.93 E-value=7e-25 Score=178.69 Aligned_cols=143 Identities=15% Similarity=0.123 Sum_probs=123.7
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCc-EEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRK-AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~-vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f 147 (252)
+++|+.+|+|++.|.+|+.++++++ ++++ +||.|++++|||+|+.+++.|.++++++++.|+++|+|+.|+.+.+++|
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~-~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~ 80 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDY-IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRF 80 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGT-TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHH
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHh-cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHH
Confidence 4679999999999999999999998 4444 6666666999999999999999999999999999999999999999999
Q ss_pred HHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCe
Q 025474 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~ 227 (252)
.++++++|++++|++..++++||+... ....|.+||+|++ |+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~~~-------------------------------------~~~~P~~~lid~~-G~ 122 (161)
T 3drn_A 81 KEKYKLPFILVSDPDKKIRELYGAKGF-------------------------------------ILPARITFVIDKK-GI 122 (161)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCCCS-------------------------------------SSCCCEEEEECTT-SB
T ss_pred HHHhCCCceEEECCcHHHHHHcCCCCc-------------------------------------CcccceEEEECCC-CE
Confidence 999999999999999999999998521 0135689999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 228 ISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 228 I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
|++.|.+. ......+++++++++
T Consensus 123 i~~~~~g~-~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 123 IRHIYNSQ-MNPANHVNEALKALK 145 (161)
T ss_dssp EEEEEECS-SCTTHHHHHHHHHHH
T ss_pred EEEEEecC-CCCCcCHHHHHHHHH
Confidence 99999883 334567888888774
No 18
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.93 E-value=4.3e-25 Score=185.85 Aligned_cols=152 Identities=13% Similarity=0.132 Sum_probs=128.0
Q ss_pred ccccCCCCCcEEecCCC----------CeEeCCCccCCCcEEEEEEcCCCCHhHHH-HHHHHHHcHHHHHhCCC-EEEEE
Q 025474 69 EDTKNLLDTVKVYDVNG----------NAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGV-ALVLI 136 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G----------~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~-el~~L~~~~~~l~~~Gv-~vV~V 136 (252)
.++||++|++++.-.++ +.++|+++++++++||+|||+.|||.|.. |++.|++.+++|+++|+ +|++|
T Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigI 89 (176)
T 4f82_A 10 IQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCV 89 (176)
T ss_dssp CCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 47899999988765422 77899998788899999999999999999 99999999999999999 99999
Q ss_pred eCCCHHHHHHHHHHhCCC--ceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccc
Q 025474 137 GPGSVEQARTFSEQTKFK--GEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQ 214 (252)
Q Consensus 137 s~~~~~~~~~f~e~~~~~--fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q 214 (252)
|++++...++|+++++++ |++++|++.++.++||+..... . .|+ +...
T Consensus 90 S~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~~~-~--------------~G~---------------g~~s 139 (176)
T 4f82_A 90 SVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLS-A--------------RGM---------------GIRS 139 (176)
T ss_dssp ESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECG-G--------------GTC---------------CEEE
T ss_pred eCCCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCcccc-c--------------cCC---------------Cccc
Confidence 999999999999999999 9999999999999999965321 0 010 0123
Q ss_pred cceEEEEeCCCCeEEEEEeCCCC-CCCCCHHHHHHHhhC
Q 025474 215 QGGIIVAGPGKSNISYIHRDKEA-GDDPDIQDILKACCS 252 (252)
Q Consensus 215 ~GG~fVid~ggg~I~~~h~~~~~-~D~p~~~eIL~al~~ 252 (252)
.+++||| ++ |+|+|.+++... .+..+.+++|++|+|
T Consensus 140 ~R~tfII-~d-G~I~~~~~~~~~~~~~~~a~~vL~~Lk~ 176 (176)
T 4f82_A 140 LRYAMVI-DG-GVVKTLAVEAPGKFEVSDAASVLATLTS 176 (176)
T ss_dssp CCEEEEE-ET-TEEEEEEECCTTCCSSSSHHHHHHTCCC
T ss_pred ccEEEEE-cC-CEEEEEEEcCCCCcchhhHHHHHHHhhC
Confidence 5689999 77 699999998622 256689999999876
No 19
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.93 E-value=5.6e-25 Score=185.95 Aligned_cols=151 Identities=11% Similarity=0.114 Sum_probs=128.6
Q ss_pred cccCCCCCcEEec--C---------CC----CeEeCCCccCCCcEEEEEEcCCCCHhHH-HHHHHHHHcHHHH-HhCCCE
Q 025474 70 DTKNLLDTVKVYD--V---------NG----NAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVM-DASGVA 132 (252)
Q Consensus 70 ~~g~~ap~f~l~d--~---------~G----~~v~ls~l~~~~~vvlvF~R~~~Cp~C~-~el~~L~~~~~~l-~~~Gv~ 132 (252)
++|+.+|+|++.+ . +| +.++|+++++++++||+||++.|||.|. .|++.+++.+++| +++|++
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5799999999998 4 67 7999999778889999999999999999 9999999999999 999995
Q ss_pred -EEEEeCCCHHHHHHHHHHhCC-CceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCC
Q 025474 133 -LVLIGPGSVEQARTFSEQTKF-KGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSR 210 (252)
Q Consensus 133 -vV~Vs~~~~~~~~~f~e~~~~-~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g 210 (252)
|++||.+++...++|++++++ +|++++|+++++.++||+..... . .|+
T Consensus 82 ~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~~~~-~--------------~G~--------------- 131 (182)
T 1xiy_A 82 DIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKS-N--------------FFM--------------- 131 (182)
T ss_dssp EEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCEEECG-G--------------GTC---------------
T ss_pred EEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCceecc-c--------------cCC---------------
Confidence 999999999999999999999 69999999999999999974321 0 010
Q ss_pred CccccceEEEEeCCCCeEEEEEeCCCCCC--------CCCHHHHHHHhhC
Q 025474 211 GGWQQGGIIVAGPGKSNISYIHRDKEAGD--------DPDIQDILKACCS 252 (252)
Q Consensus 211 ~~~q~GG~fVid~ggg~I~~~h~~~~~~D--------~p~~~eIL~al~~ 252 (252)
+....+++|||| + |+|+|.++..++.+ +..++++|++|++
T Consensus 132 g~~~~R~tfvId-d-G~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 132 GMRPWRFVAIVE-N-NILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp CEEECCEEEEEE-T-TEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred CCceEEEEEEEc-C-CEEEEEEEeCCcccccccCcccCCCHHHHHHHHHh
Confidence 012345799998 7 69999999887765 7899999999874
No 20
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.93 E-value=8.7e-25 Score=190.47 Aligned_cols=145 Identities=11% Similarity=0.101 Sum_probs=126.9
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHH-----HHHHHHHHcHHHHHhCCCEEEEEeCCCHH
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~-----~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~ 142 (252)
.+++|+.+|+|+|.|.+|+.++|+++ +++++||+||+..|||+|. .|++.|++. | .|+.||+||.|+++
T Consensus 21 ~l~vG~~APdFtL~d~~G~~vsLsd~-~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~Ds~~ 94 (224)
T 3keb_A 21 FPRKGDYLPSFMLVDDQKHDAALESF-SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVDSPS 94 (224)
T ss_dssp CCCTTCBCCCCEEEETTSCEEEGGGG-TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESSCHH
T ss_pred cCCCCCCCCCeEEECCCCCEEeHHHh-CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECCCHH
Confidence 36889999999999999999999996 5677888888888899999 999999988 4 79999999999999
Q ss_pred HHHHHHHHhCC-CceeeecC-ChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEE
Q 025474 143 QARTFSEQTKF-KGEVYADP-NHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 220 (252)
Q Consensus 143 ~~~~f~e~~~~-~fpll~Dp-~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fV 220 (252)
.+++|++++++ +|++++|+ +.++.++||+..... | + .++..+++||
T Consensus 95 ~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~----~---------------------~-------~G~~~p~tfv 142 (224)
T 3keb_A 95 SLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEY----P---------------------L-------SGYTSPAIIL 142 (224)
T ss_dssp HHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCST----T---------------------S-------TTCBCCEEEE
T ss_pred HHHHHHHHcCCCCceEEEcCCchHHHHHhCCccccc----c---------------------c-------cCCccCEEEE
Confidence 99999999999 69999999 799999999864310 0 0 0134679999
Q ss_pred EeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 221 AGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 221 id~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
||++ |+|+|.++..++.++|+++++|++|+
T Consensus 143 ID~d-G~I~~~~~~~~~~~~pd~~evl~~L~ 172 (224)
T 3keb_A 143 ADAA-NVVHYSERLANTRDFFDFDAIEKLLQ 172 (224)
T ss_dssp ECTT-CBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred EcCC-CEEEEEEecCCCCCCCCHHHHHHHHH
Confidence 9998 69999999999999999999999985
No 21
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.92 E-value=2.3e-25 Score=186.69 Aligned_cols=152 Identities=13% Similarity=0.035 Sum_probs=127.0
Q ss_pred CccccCCCCCcEEecCCC-CeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCE-EEEEeCCCHHHHH
Q 025474 68 SEDTKNLLDTVKVYDVNG-NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQAR 145 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G-~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~-vV~Vs~~~~~~~~ 145 (252)
..++|+.+|+|+|.+.++ +.++|+++++++++||+||++.|||.|..|++.+++.+++|+++|++ |++||++++...+
T Consensus 13 ~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~ 92 (171)
T 2xhf_A 13 PIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMA 92 (171)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHH
T ss_pred cccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHH
Confidence 368999999999995432 89999997788899999999999999999999999999999999996 9999999999999
Q ss_pred HHHHHhCC--CceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeC
Q 025474 146 TFSEQTKF--KGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 146 ~f~e~~~~--~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ 223 (252)
+|++++++ +|++++|++.++.++||+..... . .|. | ....+++||||
T Consensus 93 ~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~-----~----------~g~---------g------~~~~R~tfvId- 141 (171)
T 2xhf_A 93 AWGKTVDPEHKIRMLADMHGEFTRALGTELDSS-----K----------MLG---------N------NRSRRYAMLID- 141 (171)
T ss_dssp HHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCH-----H----------HHS---------S------CCBCCEEEEEE-
T ss_pred HHHHhcCCCCCeEEEEeCCchHHHHhCCceecc-----c----------cCC---------C------cceEEEEEEEe-
Confidence 99999999 99999999999999999974321 0 000 0 02356899998
Q ss_pred CCCeEEEEEeCCCCC--CCCCHHHHHHHhh
Q 025474 224 GKSNISYIHRDKEAG--DDPDIQDILKACC 251 (252)
Q Consensus 224 ggg~I~~~h~~~~~~--D~p~~~eIL~al~ 251 (252)
+ |+|+|.++..++. .+.+.++||++++
T Consensus 142 d-G~V~~~~v~~~~~~~~~s~a~~vL~~~~ 170 (171)
T 2xhf_A 142 D-NKIRSVSTEPDITGLACLLSIQRQKENK 170 (171)
T ss_dssp T-TEEEEEEETTSCSHHHHHHHHHHC----
T ss_pred C-CEEEEEEEeCCCCcccCCCHHHHHHHhc
Confidence 6 6999999998877 5667899998875
No 22
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.92 E-value=2.5e-24 Score=186.72 Aligned_cols=151 Identities=14% Similarity=0.112 Sum_probs=127.1
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~ 148 (252)
+.+|+.+|+|++.|.+| .++|+++.+++++||+|||+.|||+|..|++.|++++++|++.|++||+|+.|+.+.+++|.
T Consensus 5 l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~ 83 (224)
T 1prx_A 5 LLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWS 83 (224)
T ss_dssp CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH
T ss_pred CCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 57899999999999999 99999986555799999999999999999999999999999999999999999998889998
Q ss_pred HH----------hCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceE
Q 025474 149 EQ----------TKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 218 (252)
Q Consensus 149 e~----------~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~ 218 (252)
++ .+++||+++|+++++.++||+...... . + .+.....+++
T Consensus 84 ~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~---------------~-----------~---~g~~~~~p~~ 134 (224)
T 1prx_A 84 KDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEK---------------D-----------E---KGMPVTARVV 134 (224)
T ss_dssp HHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTT---------------C-----------S---SSCCTTCCEE
T ss_pred HHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccc---------------c-----------C---CCccccceEE
Confidence 87 789999999999999999998643100 0 0 0011347899
Q ss_pred EEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 219 IVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 219 fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
||||++ |+|++.+.......+ +.+||+++++
T Consensus 135 fiID~~-G~I~~~~~~~~~~gr-~~~eil~~i~ 165 (224)
T 1prx_A 135 FVFGPD-KKLKLSILYPATTGR-NFDEILRVVI 165 (224)
T ss_dssp EEECTT-SBEEEEEECCTTBCC-CHHHHHHHHH
T ss_pred EEECCC-CEEEEEEecCCCCCC-CHHHHHHHHH
Confidence 999998 699999987554443 6889988764
No 23
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.92 E-value=5e-24 Score=172.21 Aligned_cols=146 Identities=14% Similarity=0.166 Sum_probs=125.7
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~ 148 (252)
+.+|+.+|+|++.|.+|+.++++++.+++++||.|+|++||+.|+.+++.|.++++++++.|+++|+|+.|+.+.+++|.
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~ 88 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWA 88 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHH
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHH
Confidence 67899999999999999999999983323666666679999999999999999999998889999999999999999999
Q ss_pred HHhCCCceeeecC--ChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCC
Q 025474 149 EQTKFKGEVYADP--NHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 149 e~~~~~fpll~Dp--~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg 226 (252)
++++++|+++.|. +..+++.||+.... .+.+.+.+||+|++ |
T Consensus 89 ~~~~~~~~~~~d~~~~~~~~~~~~v~~~~-----------------------------------~~~p~~~~~lid~~-G 132 (160)
T 1xvw_A 89 TQSGFTFPLLSDFWPHGAVSQAYGVFNEQ-----------------------------------AGIANRGTFVVDRS-G 132 (160)
T ss_dssp HHHTCCSCEEECTTTTTHHHHHTTCEETT-----------------------------------TTEECSEEEEECTT-S
T ss_pred HhcCCCceEEecCCcChHHHHHcCCcccc-----------------------------------CCCeeeeEEEECCC-C
Confidence 9999999999995 99999999975321 01123489999998 6
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 227 NISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 227 ~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+|++.|.+. ..+.+++++++++++
T Consensus 133 ~i~~~~~g~-~~~~~~~~~l~~~l~ 156 (160)
T 1xvw_A 133 IIRFAEMKQ-PGEVRDQRLWTDALA 156 (160)
T ss_dssp BEEEEEECC-TTCCCCHHHHHHHHH
T ss_pred eEEEEEecC-CCCCCCHHHHHHHHH
Confidence 999999985 677889999998875
No 24
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.92 E-value=2.6e-24 Score=186.81 Aligned_cols=151 Identities=13% Similarity=0.153 Sum_probs=128.8
Q ss_pred ccccCCCCCcEEecC-CCC--eEeCCCccCCCcEEEEEEcCCCCHhHH-HHHHHHHHcHHHHHhCCC-EEEEEeCCCHHH
Q 025474 69 EDTKNLLDTVKVYDV-NGN--AIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGV-ALVLIGPGSVEQ 143 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~-~G~--~v~ls~l~~~~~vvlvF~R~~~Cp~C~-~el~~L~~~~~~l~~~Gv-~vV~Vs~~~~~~ 143 (252)
+.+|+.+|+|++.|. +|+ .++|+++++++++||.|+|++|||.|+ .|++.|++++++|++.|+ +||+|+.++.+.
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~ 82 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFV 82 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHH
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHH
Confidence 468999999999996 777 999999446778888888899999999 999999999999999999 999999999999
Q ss_pred HHHHHHHhCCC-ceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEe
Q 025474 144 ARTFSEQTKFK-GEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 222 (252)
Q Consensus 144 ~~~f~e~~~~~-fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid 222 (252)
+++|.++++++ |++++|++.++.++||+..... . .|+ +....+++||+
T Consensus 83 ~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~-~--------------~g~---------------~~~~~p~t~li- 131 (241)
T 1nm3_A 83 MNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKE-D--------------LGF---------------GKRSWRYSMLV- 131 (241)
T ss_dssp HHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECT-T--------------TTC---------------CEEECCEEEEE-
T ss_pred HHHHHHhcCCCceEEEECCCcHHHHHhCceeecc-c--------------ccC---------------cccceeEEEEE-
Confidence 99999999997 9999999999999999864311 0 010 00135789999
Q ss_pred CCCCeEEEEEeCCCCCCC----CCHHHHHHHhh
Q 025474 223 PGKSNISYIHRDKEAGDD----PDIQDILKACC 251 (252)
Q Consensus 223 ~ggg~I~~~h~~~~~~D~----p~~~eIL~al~ 251 (252)
++ |+|+|.|++..+.++ .+++++|++++
T Consensus 132 ~~-G~i~~~~~~~~~~~~~~~~~~~~~il~~l~ 163 (241)
T 1nm3_A 132 KN-GVVEKMFIEPNEPGDPFKVSDADTMLKYLA 163 (241)
T ss_dssp ET-TEEEEEEECCSCSSCCCSSSSHHHHHHHHC
T ss_pred EC-CEEEEEEEeccCCCccceecCHHHHHHHhh
Confidence 87 699999999887766 79999999875
No 25
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.92 E-value=4.4e-24 Score=184.82 Aligned_cols=146 Identities=10% Similarity=0.070 Sum_probs=123.9
Q ss_pred CccccCCCCCcEEecC--CC--CeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH
Q 025474 68 SEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~--~G--~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~ 143 (252)
.+.+|+.+|+|++.|. +| +.++|+++++++++||.|++++|||+|+.+++.|++++++|++.|++||+|+.|+.+.
T Consensus 24 ~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~ 103 (221)
T 2c0d_A 24 LSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYS 103 (221)
T ss_dssp --CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHH
T ss_pred cCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 4678999999999998 99 9999999855666666555599999999999999999999999999999999999999
Q ss_pred HHHHHHHh-------CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccc
Q 025474 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 144 ~~~f~e~~-------~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~G 216 (252)
+++|.+++ +++|++++|++.++.++||+. ... | ...+
T Consensus 104 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~-~~~-----------------g------------------~~~P 147 (221)
T 2c0d_A 104 HLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL-YDN-----------------S------------------FALR 147 (221)
T ss_dssp HHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE-ETT-----------------T------------------EECE
T ss_pred HHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc-ccC-----------------C------------------Cccc
Confidence 99999988 789999999999999999986 310 0 1356
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 217 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 217 G~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
.+||||++ |+|++.+.+.. ...++.++|+++++
T Consensus 148 ~~~lID~~-G~I~~~~~g~~-~~~~~~~ell~~l~ 180 (221)
T 2c0d_A 148 GLFIIDKN-GCVRHQTVNDL-PIGRNVQEVLRTID 180 (221)
T ss_dssp EEEEECTT-SBEEEEEEECT-TCCCCHHHHHHHHH
T ss_pred eEEEECCC-CeEEEEEecCC-CCCCCHHHHHHHHH
Confidence 89999998 69999998855 34468889988764
No 26
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.92 E-value=4e-24 Score=179.32 Aligned_cols=144 Identities=16% Similarity=0.147 Sum_probs=120.2
Q ss_pred cccCCCCCcEEecC-CC--CeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHH
Q 025474 70 DTKNLLDTVKVYDV-NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (252)
Q Consensus 70 ~~g~~ap~f~l~d~-~G--~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~ 146 (252)
.+|+.+|+|++.|. +| +.++|+++ +++++||.|++++|||+|+.+++.|++++++|++.|++||+|+.++.+.+++
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~-~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~ 80 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDT-EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKA 80 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHH-TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHH-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH
Confidence 57999999999999 59 89999998 4445555554469999999999999999999999999999999999999999
Q ss_pred HHHHh----CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEe
Q 025474 147 FSEQT----KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 222 (252)
Q Consensus 147 f~e~~----~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid 222 (252)
|++++ +++|++++|++.+++++||+..... ++..+.+||||
T Consensus 81 ~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~-----------------------------------g~~~p~~~lID 125 (186)
T 1n8j_A 81 WHSSSETIAKIKYAMIGDPTGALTRNFDNMREDE-----------------------------------GLADRATFVVD 125 (186)
T ss_dssp HHHHCTTGGGCCSEEEECTTSHHHHHTTCEETTT-----------------------------------TEECEEEEEEC
T ss_pred HHHHcCcccCCceeEEECCchHHHHHhCCccCCC-----------------------------------CceeeEEEEEC
Confidence 99999 8999999999999999999854210 12357899999
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 223 PGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 223 ~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
++ |+|++.|.+....+ .+.++++++++
T Consensus 126 ~~-G~i~~~~~~~~~~~-~~~~~l~~~l~ 152 (186)
T 1n8j_A 126 PQ-GIIQAIEVTAEGIG-RDASDLLRKIK 152 (186)
T ss_dssp TT-SBEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred CC-CeEEEEEecCCCCC-CCHHHHHHHHH
Confidence 98 69999998754322 36788887764
No 27
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.91 E-value=5.9e-24 Score=185.87 Aligned_cols=151 Identities=11% Similarity=0.094 Sum_probs=124.8
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~ 148 (252)
+.+|+.+|+|++.|.+| .++|+++.+++++||+|+++.|||+|..|++.|++++++|++.|++||+|+.|+.+..++|.
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~ 81 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWS 81 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Confidence 57899999999999999 99999985444677777779999999999999999999999999999999999999899999
Q ss_pred H------Hh--CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEE
Q 025474 149 E------QT--KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 220 (252)
Q Consensus 149 e------~~--~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fV 220 (252)
+ ++ +++||+++|+++++.++||+...... .+ .+.....+++||
T Consensus 82 ~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~--------------------------~~---~g~~~~~p~~fi 132 (233)
T 2v2g_A 82 EDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDER--------------------------TS---TGMPLTCRAVFI 132 (233)
T ss_dssp HHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEE--------------------------CT---TCCEEECEEEEE
T ss_pred HHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccc--------------------------cC---CCcccccceEEE
Confidence 8 56 89999999999999999998642100 00 011234789999
Q ss_pred EeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 221 AGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 221 id~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
||++ |+|++.+.......+ +++|||++++
T Consensus 133 ID~~-G~I~~~~~~~~~~gr-~~~eilr~l~ 161 (233)
T 2v2g_A 133 IGPD-KKLKLSILYPATTGR-NFSEILRVID 161 (233)
T ss_dssp ECTT-SBEEEEEEECTTBCC-CHHHHHHHHH
T ss_pred ECCC-CEEEEEEecCCCCCC-CHHHHHHHHH
Confidence 9998 699999987544333 6889988775
No 28
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.91 E-value=6.5e-24 Score=183.64 Aligned_cols=151 Identities=10% Similarity=0.046 Sum_probs=124.8
Q ss_pred ccccCCCCCcEEecC--CCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHH
Q 025474 69 EDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~--~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~ 146 (252)
+.+|+.+|+|++.+. +| .++|+++.+++++||+|||+.|||.|..|+++|++++++|++.|++||+|+.|+.+..++
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~ 81 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDK 81 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHH
Confidence 568999999999999 99 999999844447999999999999999999999999999999999999999999988888
Q ss_pred HHH-------HhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEE
Q 025474 147 FSE-------QTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGII 219 (252)
Q Consensus 147 f~e-------~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~f 219 (252)
|.+ +++++||+++|+++++.++||+...... .+ .+.....+++|
T Consensus 82 ~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~--------------------------~~---~g~~~~~p~~f 132 (220)
T 1xcc_A 82 WIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEK--------------------------DI---TGLPLTCRCLF 132 (220)
T ss_dssp HHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEE--------------------------CT---TSCEEECEEEE
T ss_pred HHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCcccc--------------------------cC---CCCCcccceEE
Confidence 887 4789999999999999999998642100 00 00013478999
Q ss_pred EEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 220 VAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 220 Vid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
|||++ |+|++.+.......+ +.+||+++++
T Consensus 133 lID~~-G~I~~~~~~~~~~g~-~~~ell~~i~ 162 (220)
T 1xcc_A 133 FISPE-KKIKATVLYPATTGR-NAHEILRVLK 162 (220)
T ss_dssp EECTT-SBEEEEEEECTTBCC-CHHHHHHHHH
T ss_pred EECCC-CEEEEEEecCCCCCC-CHHHHHHHHH
Confidence 99998 699999987543333 7889988765
No 29
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.91 E-value=3.4e-24 Score=173.99 Aligned_cols=133 Identities=8% Similarity=0.109 Sum_probs=113.1
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCc-EEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHH
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRK-AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~-vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~ 146 (252)
.+.+|+.+|+|++.|.+|+.++|+++.++++ +||.||+++|||.|+.+++.|.+++++|++.| +||+|+.++.+.+++
T Consensus 6 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~ 84 (159)
T 2a4v_A 6 ELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKK 84 (159)
T ss_dssp CCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHH
T ss_pred cCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHH
Confidence 4688999999999999999999999954344 45555579999999999999999999999999 999999999999999
Q ss_pred HHHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCC
Q 025474 147 FSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 147 f~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg 226 (252)
|+++++++|++++|++.+++++||+.... . .| ..+.+||| ++ |
T Consensus 85 ~~~~~~~~~~~l~D~~~~~~~~~gv~~~p------~---------------------~g--------~~~~~~li-~~-G 127 (159)
T 2a4v_A 85 FQSKQNLPYHLLSDPKREFIGLLGAKKTP------L---------------------SG--------SIRSHFIF-VD-G 127 (159)
T ss_dssp HHHHHTCSSEEEECTTCHHHHHHTCBSSS------S---------------------SC--------BCCEEEEE-ET-T
T ss_pred HHHHhCCCceEEECCccHHHHHhCCcccc------c---------------------CC--------ccceEEEE-cC-C
Confidence 99999999999999999999999985421 0 00 24579999 88 6
Q ss_pred eEEEEEeCCCCC
Q 025474 227 NISYIHRDKEAG 238 (252)
Q Consensus 227 ~I~~~h~~~~~~ 238 (252)
+|++.|.+..+.
T Consensus 128 ~i~~~~~g~~~~ 139 (159)
T 2a4v_A 128 KLKFKRVKISPE 139 (159)
T ss_dssp EEEEEEESCCHH
T ss_pred EEEEEEccCCcc
Confidence 999999875443
No 30
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.91 E-value=2.7e-23 Score=178.36 Aligned_cols=146 Identities=10% Similarity=0.063 Sum_probs=124.7
Q ss_pred CccccCCCCCcEEecC--CC--CeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH
Q 025474 68 SEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~--~G--~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~ 143 (252)
.+.+|+.+|+|++.|. +| +.++|+++++++++||.|+++.|||+|..+++.|++++++|++.|++||+|+.|+.+.
T Consensus 20 ~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~ 99 (213)
T 2i81_A 20 PTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYT 99 (213)
T ss_dssp CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHH
T ss_pred cccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 3578999999999998 89 8999999866666666666699999999999999999999999999999999999999
Q ss_pred HHHHHHHh-------CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccc
Q 025474 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 144 ~~~f~e~~-------~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~G 216 (252)
+++|.+++ +++||+++|++.++.++||+... . | ...+
T Consensus 100 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~-~-----------------g------------------~~~p 143 (213)
T 2i81_A 100 HLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFD-D-----------------S------------------VSLR 143 (213)
T ss_dssp HHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEET-T-----------------T------------------EECE
T ss_pred HHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCccc-c-----------------C------------------Cccc
Confidence 99999988 89999999999999999998641 0 0 2356
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 217 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 217 G~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
++||||++ |+|++.+.+.... ..+.++++++++
T Consensus 144 ~~~lID~~-G~i~~~~~~~~~~-~~~~~ell~~l~ 176 (213)
T 2i81_A 144 AFVLIDMN-GIVQHLLVNNLAI-GRSVDEILRIID 176 (213)
T ss_dssp EEEEECTT-SBEEEEEEECTTC-CCCHHHHHHHHH
T ss_pred EEEEECCC-CEEEEEEecCCCC-CCCHHHHHHHHH
Confidence 89999998 6999999875543 347888888764
No 31
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.90 E-value=2.3e-23 Score=172.53 Aligned_cols=146 Identities=13% Similarity=0.094 Sum_probs=120.1
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCC-CHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHH
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFG-CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~-Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~ 146 (252)
.+.+|+.+|+|++.|.+|+.++++++ + ++++|++||++| |++|+.+++.|.+++++ .|+++|+|+.|+.+.+++
T Consensus 17 ~l~~G~~~P~f~l~~~~G~~v~l~~~-~-gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~~~~~~ 91 (175)
T 1xvq_A 17 LPAVGSPAPAFTLTGGDLGVISSDQF-R-GKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLPFAQKR 91 (175)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-T-TSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCHHHHTT
T ss_pred CCCcCCcCCCeEEECCCCCEEeHHHc-C-CCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCHHHHHH
Confidence 35789999999999999999999998 4 445566667776 99999999999999887 789999999999999999
Q ss_pred HHHHhCC-CceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCC
Q 025474 147 FSEQTKF-KGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 225 (252)
Q Consensus 147 f~e~~~~-~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~gg 225 (252)
|.+++++ +|+++.|++..++++||+...... ..+...|.+||+|++
T Consensus 92 ~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~--------------------------------~~g~~~p~~~lid~~- 138 (175)
T 1xvq_A 92 FCGAEGTENVMPASAFRDSFGEDYGVTIADGP--------------------------------MAGLLARAIVVIGAD- 138 (175)
T ss_dssp CC------CEEEEECTTSSHHHHTTCBBCSST--------------------------------TTTSBCSEEEEECTT-
T ss_pred HHHHcCCCCceEeeCCHHHHHHHhCCcccccc--------------------------------cCCcccceEEEECCC-
Confidence 9999999 899999999999999998643110 011346789999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 226 SNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 226 g~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
|+|++.+.+....+.++++++|+++.
T Consensus 139 G~I~~~~~g~~~~~~~~~~~~l~~l~ 164 (175)
T 1xvq_A 139 GNVAYTELVPEIAQEPNYEAALAALG 164 (175)
T ss_dssp SBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred CeEEEEEECCCcCCCCCHHHHHHHHH
Confidence 69999999878889999999999875
No 32
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.90 E-value=9.6e-24 Score=172.17 Aligned_cols=144 Identities=13% Similarity=0.099 Sum_probs=125.4
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCC-CHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHH
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFG-CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~-Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~ 146 (252)
.+++|+.+|+|++.|.+|+.++++++ .++.+|++||++| |+.|+.+++.|+++++++ .|+++|+|+.|+.+.+++
T Consensus 17 ~~~~G~~~p~f~l~~~~G~~~~l~~~--~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~~~ 92 (167)
T 2jsy_A 17 EVKVGDQAPDFTVLTNSLEEKSLADM--KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQAR 92 (167)
T ss_dssp CCCTTSCCCCCEEEBTTCCEEEHHHH--TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGTSC
T ss_pred ccCCCCcCCceEEECCCCCEeeHHHh--CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHHHH
Confidence 36789999999999999999999998 3455666777777 999999999999999999 799999999999888999
Q ss_pred HHHHhCC-Cceeeec-CChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCC
Q 025474 147 FSEQTKF-KGEVYAD-PNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 224 (252)
Q Consensus 147 f~e~~~~-~fpll~D-p~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~g 224 (252)
|.+++++ +|+++.| ++.++.++||+.... .+...|.+||+|++
T Consensus 93 ~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~-----------------------------------~g~~~p~~~lid~~ 137 (167)
T 2jsy_A 93 WCGANGIDKVETLSDHRDMSFGEAFGVYIKE-----------------------------------LRLLARSVFVLDEN 137 (167)
T ss_dssp CGGGSSCTTEEEEEGGGTCHHHHHTTCBBTT-----------------------------------TCSBCCEEEEECTT
T ss_pred HHHhcCCCCceEeeCCchhHHHHHhCCcccc-----------------------------------CCceeeEEEEEcCC
Confidence 9999999 8999999 999999999875321 01235689999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 225 KSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 225 gg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
|+|++.|.+.+..++++.++++++++
T Consensus 138 -G~i~~~~~g~~~~~~~~~~~l~~~l~ 163 (167)
T 2jsy_A 138 -GKVVYAEYVSEATNHPNYEKPIEAAK 163 (167)
T ss_dssp -SCEEEEEECSBTTSCCCSHHHHHHHH
T ss_pred -CcEEEEEecCCcCCCCCHHHHHHHHH
Confidence 69999999988999999999998875
No 33
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.90 E-value=4.3e-23 Score=176.90 Aligned_cols=146 Identities=9% Similarity=0.026 Sum_probs=120.1
Q ss_pred CccccCCCCCcEEecC---CCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHH
Q 025474 68 SEDTKNLLDTVKVYDV---NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~---~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~ 144 (252)
.+.+|+.+|+|++.|. +|+.++|+++ +++++||.|++++|||.|+.+++.|++++++|++.|++||+|+.|+.+.+
T Consensus 18 ~~~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 96 (211)
T 2pn8_A 18 LYFQSMPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTH 96 (211)
T ss_dssp -CCSSCBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cCCCCCcCCCeEeecccCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 4578999999999974 5689999998 44455554444999999999999999999999999999999999999999
Q ss_pred HHHHHHh-------CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccce
Q 025474 145 RTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 145 ~~f~e~~-------~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG 217 (252)
++|++++ +++|++++|++.++.++||+..... +...+.
T Consensus 97 ~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~-----------------------------------g~~~p~ 141 (211)
T 2pn8_A 97 LAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDS-----------------------------------GHTLRG 141 (211)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTT-----------------------------------TEECEE
T ss_pred HHHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCC-----------------------------------Ccccce
Confidence 9999988 7899999999999999999853210 023678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+||||++ |+|++.+.+....+ .+.++++++++
T Consensus 142 ~~lID~~-G~I~~~~~g~~~~~-~~~~ell~~l~ 173 (211)
T 2pn8_A 142 LFIIDDK-GILRQITLNDLPVG-RSVDETLRLVQ 173 (211)
T ss_dssp EEEECTT-SBEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred EEEECCC-CEEEEEEecCCCCC-CCHHHHHHHHH
Confidence 9999998 69999998744332 37788887764
No 34
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.90 E-value=6.1e-23 Score=171.04 Aligned_cols=144 Identities=12% Similarity=0.193 Sum_probs=120.7
Q ss_pred cccCCCCCcEEecCCCC----eEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHH
Q 025474 70 DTKNLLDTVKVYDVNGN----AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (252)
Q Consensus 70 ~~g~~ap~f~l~d~~G~----~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~ 145 (252)
.+|+.+|+|++.|.+|+ .++++++ +++++||.|+|++||++|+.+++.|.+++++|++.|+++|+|+.++.+.++
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~ 80 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADL-KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHK 80 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTT-SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHH-CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHH
Confidence 57999999999999999 9999998 445555555559999999999999999999999999999999999999999
Q ss_pred HHHHHh----CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEE
Q 025474 146 TFSEQT----KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 146 ~f~e~~----~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVi 221 (252)
+|.+++ +++|+++.|++.+++++||+..... +...|.+||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~-----------------------------------g~~~P~~~li 125 (187)
T 1we0_A 81 AWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEET-----------------------------------GLADRGTFII 125 (187)
T ss_dssp HHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTT-----------------------------------TEECEEEEEE
T ss_pred HHHHHhccccCCCceEEECCchHHHHHhCCCcCCC-----------------------------------CceeeEEEEE
Confidence 999998 8999999999999999999864210 1236789999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 222 GPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 222 d~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
|++ |+|++.|.+....+ .+.++|+++++
T Consensus 126 d~~-G~i~~~~~g~~~~~-~~~~~l~~~l~ 153 (187)
T 1we0_A 126 DPD-GVIQAIEINADGIG-RDASTLINKVK 153 (187)
T ss_dssp CTT-SBEEEEEEECTTSC-CCTTHHHHHHH
T ss_pred CCC-CeEEEEEecCCCCC-CCHHHHHHHHH
Confidence 998 69999998865433 25667776653
No 35
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.90 E-value=3.8e-23 Score=182.85 Aligned_cols=147 Identities=9% Similarity=0.053 Sum_probs=123.4
Q ss_pred CCccccCCCCCcEEe---cCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH
Q 025474 67 VSEDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 67 ~~~~~g~~ap~f~l~---d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~ 143 (252)
..+.+|+.+|+|++. |.+|+.++|+++ +++++||+|+++.|||+|..+++.|++++++|++.|++||+|+.|+.+.
T Consensus 60 ~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~-kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~ 138 (254)
T 3tjj_A 60 SKAKISKPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFT 138 (254)
T ss_dssp CCCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCCCCCCcEeeeecCCCCcEEeHHHH-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHH
Confidence 346789999999976 557889999998 5556677777799999999999999999999999999999999999999
Q ss_pred HHHHHHHh-------CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccc
Q 025474 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 144 ~~~f~e~~-------~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~G 216 (252)
.++|++++ +++||+++|++.++.++||+.... .+...+
T Consensus 139 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~-----------------------------------~g~~~p 183 (254)
T 3tjj_A 139 HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLED-----------------------------------SGHTLR 183 (254)
T ss_dssp HHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETT-----------------------------------TTEECE
T ss_pred HHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCcccc-----------------------------------CCCccc
Confidence 99999886 799999999999999999985321 012357
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 217 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 217 G~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
++||||++ |+|++.+...... ...++++|++++
T Consensus 184 ~tflID~~-G~I~~~~~~~~~~-~~~~~eil~~L~ 216 (254)
T 3tjj_A 184 GLFIIDDK-GILRQITLNDLPV-GRSVDETLRLVQ 216 (254)
T ss_dssp EEEEECTT-SBEEEEEEECTTC-CCCHHHHHHHHH
T ss_pred eEEEECCC-CeEEEEEecCCCC-CCCHHHHHHHHH
Confidence 89999998 6999999985443 447888888764
No 36
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.90 E-value=3.1e-23 Score=173.75 Aligned_cols=144 Identities=12% Similarity=0.092 Sum_probs=122.2
Q ss_pred cccCCCCCcEEecC--CC--CeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHH
Q 025474 70 DTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (252)
Q Consensus 70 ~~g~~ap~f~l~d~--~G--~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~ 145 (252)
++|+.+|+|++.|. +| +.++|+++++++++||.|++++||++|+.+++.|++++++|++.|++||+|+.++.+.++
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~ 80 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHL 80 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHH
Confidence 36999999999998 99 999999986566666666559999999999999999999999999999999999999999
Q ss_pred HHHHHh-------CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceE
Q 025474 146 TFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 218 (252)
Q Consensus 146 ~f~e~~-------~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~ 218 (252)
+|.+++ +++|++++|++.+++++||+... . | ...|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~-~-----------------g------------------~~~P~~ 124 (192)
T 2h01_A 81 AWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFN-E-----------------S------------------VALRAF 124 (192)
T ss_dssp HHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEET-T-----------------T------------------EECCEE
T ss_pred HHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCc-C-----------------C------------------ceeeEE
Confidence 999988 89999999999999999998641 0 0 235689
Q ss_pred EEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 219 IVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 219 fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
||+|++ |+|++.+.+....+ .+.++++++++
T Consensus 125 ~liD~~-G~i~~~~~g~~~~~-~~~~~l~~~l~ 155 (192)
T 2h01_A 125 VLIDKQ-GVVQHLLVNNLALG-RSVDEILRLID 155 (192)
T ss_dssp EEECTT-SBEEEEEEGGGSSG-GGHHHHHHHHH
T ss_pred EEEcCC-CEEEEEEeCCCCCC-CCHHHHHHHHH
Confidence 999998 69999998754433 37788887764
No 37
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.90 E-value=7.1e-23 Score=179.28 Aligned_cols=146 Identities=10% Similarity=0.044 Sum_probs=120.9
Q ss_pred CccccCCCCCcEEec---CCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHH
Q 025474 68 SEDTKNLLDTVKVYD---VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d---~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~ 144 (252)
.+.+|+.+|+|++.+ .+|+.++|+++ +++++||.|+..+|||+|..+++.|++++++|++.|++||+|+.|+.+..
T Consensus 47 ~l~vG~~aPdF~l~~~~d~~G~~vsLsd~-~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~ 125 (240)
T 3qpm_A 47 KAKISKPAPQWEGTAVINGEFKELKLSDY-RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTH 125 (240)
T ss_dssp SCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHH
T ss_pred cCCCCCCCCCcEeeeeeCCCCcEEEHHHh-CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 357899999999774 45679999998 44555555555599999999999999999999999999999999999999
Q ss_pred HHHHHHh-------CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccce
Q 025474 145 RTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 145 ~~f~e~~-------~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG 217 (252)
++|.+++ +++||+++|++.++.++||+.... .+...++
T Consensus 126 ~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~-----------------------------------~g~~~p~ 170 (240)
T 3qpm_A 126 LAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLED-----------------------------------QGHTLRG 170 (240)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETT-----------------------------------TTEECEE
T ss_pred HHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCcccc-----------------------------------CCCccce
Confidence 9999886 799999999999999999985321 0123578
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+||||++ |+|++.+...... ...++++|+.++
T Consensus 171 ~flID~~-G~I~~~~~~~~~~-~~~~~eil~~l~ 202 (240)
T 3qpm_A 171 LFIIDEK-GVLRQITMNDLPV-GRSVDETLRLVQ 202 (240)
T ss_dssp EEEECTT-SBEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred EEEEcCC-CeEEEEEecCCCC-CCCHHHHHHHHH
Confidence 9999998 6999999875443 446888888764
No 38
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.89 E-value=1.5e-22 Score=170.07 Aligned_cols=145 Identities=10% Similarity=0.113 Sum_probs=122.4
Q ss_pred CccccCCCCCcEEecCC-------------C--CeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCE
Q 025474 68 SEDTKNLLDTVKVYDVN-------------G--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVA 132 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~-------------G--~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~ 132 (252)
.+.+|+.+|+|++.|.+ | +.++++++ +++++||.|+|++|||+|+.+++.|.++++++++.|++
T Consensus 3 ~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~ 81 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEH-PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQ 81 (195)
T ss_dssp BCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSS-TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEE
T ss_pred cCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHh-CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCE
Confidence 46789999999999988 7 89999998 44555555555999999999999999999999999999
Q ss_pred EEEEeCCCHHHHHHHHHHh----CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhccccccccccc
Q 025474 133 LVLIGPGSVEQARTFSEQT----KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTV 208 (252)
Q Consensus 133 vV~Vs~~~~~~~~~f~e~~----~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~ 208 (252)
+|+|+.++.+.+++|.+++ +++|++++|++.+++++||+... .
T Consensus 82 vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~-~-------------------------------- 128 (195)
T 2bmx_A 82 ILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNA-D-------------------------------- 128 (195)
T ss_dssp EEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCT-T--------------------------------
T ss_pred EEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCccc-C--------------------------------
Confidence 9999999999999999998 89999999999999999997532 0
Q ss_pred CCCccccceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 209 SRGGWQQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 209 ~g~~~q~GG~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+...|.+||+|++ |+|++.+.+....+ .+.++|+++++
T Consensus 129 ---g~~~P~~~lid~~-G~i~~~~~g~~~~~-~~~~~l~~~l~ 166 (195)
T 2bmx_A 129 ---GVADRVTFIVDPN-NEIQFVSATAGSVG-RNVDEVLRVLD 166 (195)
T ss_dssp ---SSBCEEEEEECTT-SBEEEEEEECTTCC-CCHHHHHHHHH
T ss_pred ---CCccceEEEEcCC-CeEEEEEecCCCCC-CCHHHHHHHHH
Confidence 0125689999998 69999998865333 37888888764
No 39
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.89 E-value=1.6e-22 Score=174.22 Aligned_cols=145 Identities=13% Similarity=0.115 Sum_probs=121.5
Q ss_pred CccccCCCCCcEEecC---CCCeEeCCCccCCCcEEEEEEc-CCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH
Q 025474 68 SEDTKNLLDTVKVYDV---NGNAIPISDLWKDRKAVVAFAR-HFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~---~G~~v~ls~l~~~~~vvlvF~R-~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~ 143 (252)
.+.+|+.+|+|++.+. +|+.++|+++ + ++++|++|| .+||++|+.+++.|++++++|++.|++||+|+.|+.+.
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~-~-Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~ 116 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDY-R-GKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYS 116 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGG-T-TSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHh-C-CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 4688999999999954 5699999998 4 455666666 59999999999999999999999999999999999999
Q ss_pred HHHHHHHh-------CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccc
Q 025474 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 144 ~~~f~e~~-------~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~G 216 (252)
.++|.+.+ +++|+++.|++..+.++||+.... .+...|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~-----------------------------------~g~~~P 161 (222)
T 3ztl_A 117 HLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEE-----------------------------------DGNAFR 161 (222)
T ss_dssp HHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTT-----------------------------------TSSBCE
T ss_pred HHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecC-----------------------------------CCCccc
Confidence 99999887 899999999999999999985321 012367
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 217 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 217 G~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
.+||||++ |+|++.+.+....+ ..+++++++++
T Consensus 162 ~~~lID~~-G~I~~~~~g~~~~~-~~~~~il~~l~ 194 (222)
T 3ztl_A 162 GLFIIDPN-GILRQITINDKPVG-RSVDETLRLLD 194 (222)
T ss_dssp EEEEECTT-SEEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred eEEEECCC-CeEEEEEecCCCCC-CCHHHHHHHHH
Confidence 89999998 69999999865543 35889988774
No 40
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.89 E-value=5e-23 Score=187.88 Aligned_cols=134 Identities=14% Similarity=0.139 Sum_probs=117.3
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhC
Q 025474 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK 152 (252)
Q Consensus 73 ~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~ 152 (252)
.++|+|+|.|.+|++++|+|+ +++++||.||+..|||.|..|+++|++. ...|++||+||.|+++.+++|+++++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~-~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~~~~~~~f~~~~~ 76 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDL-YGKYTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDSVEALKRFKEKND 76 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGT-TTSEEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCCHHHHHHHHHHHT
T ss_pred CCCCCcEEECCCcCEEeHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCCHHHHHHHHHhhC
Confidence 479999999999999999998 5668888888899999999999999753 23589999999999999999999999
Q ss_pred CCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCeEEEEE
Q 025474 153 FKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYIH 232 (252)
Q Consensus 153 ~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~I~~~h 232 (252)
++||+++|++.++.++||+.... ...+++||||++ |+|++.|
T Consensus 77 l~fp~l~D~~~~v~~~ygv~~~~-------------------------------------~~~r~tfiId~~-G~i~~~~ 118 (322)
T 4eo3_A 77 LKVTLLSDPEGILHEFFNVLENG-------------------------------------KTVRSTFLIDRW-GFVRKEW 118 (322)
T ss_dssp CCSEEEECTTCHHHHHTTCEETT-------------------------------------EECCEEEEECTT-SBEEEEE
T ss_pred CceEEEEcCchHHHHhcCCCCCC-------------------------------------cCccEEEEECCC-CEEEEEE
Confidence 99999999999999999985210 124689999998 6999999
Q ss_pred eCCCCCCCCCHHHHHHHhh
Q 025474 233 RDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 233 ~~~~~~D~p~~~eIL~al~ 251 (252)
+.-.+.+|++ |||++++
T Consensus 119 ~~v~~~~h~~--~~l~~~~ 135 (322)
T 4eo3_A 119 RRVKVEGHVQ--EVKEALD 135 (322)
T ss_dssp ESCCSTTHHH--HHHHHHH
T ss_pred eCCCccccHH--HHHHHHh
Confidence 9999999866 9998875
No 41
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.89 E-value=1.7e-22 Score=173.99 Aligned_cols=146 Identities=11% Similarity=0.090 Sum_probs=122.1
Q ss_pred CccccCCCCCcEEec---CCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHH
Q 025474 68 SEDTKNLLDTVKVYD---VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d---~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~ 144 (252)
.+.+|+.+|+|++.+ .+|+.++|+++ +++++||.|+++.|||+|+.+++.|.+++++|++.|++||+|+.++.+..
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 104 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISLDDF-KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSH 104 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEGGGG-TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 367899999999974 57899999998 44555555555999999999999999999999999999999999999999
Q ss_pred HHHHHHh-------CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccce
Q 025474 145 RTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 145 ~~f~e~~-------~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG 217 (252)
++|.+++ +++|++++|++.++.++||+..... +...|.
T Consensus 105 ~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~-----------------------------------g~~~P~ 149 (220)
T 1zye_A 105 LAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGP-----------------------------------GLALRG 149 (220)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTT-----------------------------------TEECEE
T ss_pred HHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCC-----------------------------------Ccccce
Confidence 9999887 8899999999999999999864210 123678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+||||++ |+|++.+.+. .....+.+|++++++
T Consensus 150 ~~liD~~-G~I~~~~~g~-~~~~~~~~ell~~l~ 181 (220)
T 1zye_A 150 LFIIDPN-GVIKHLSVND-LPVGRSVEETLRLVK 181 (220)
T ss_dssp EEEECTT-SBEEEEEEEC-TTCCCCHHHHHHHHH
T ss_pred EEEECCC-CEEEEEEecC-CCCCCCHHHHHHHHH
Confidence 9999998 6999999885 334467889888764
No 42
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.89 E-value=2.9e-22 Score=169.43 Aligned_cols=146 Identities=12% Similarity=0.169 Sum_probs=122.6
Q ss_pred CccccCCCCCcEEecC--CC--CeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH
Q 025474 68 SEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~--~G--~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~ 143 (252)
.+.+|+.+|+|++.+. +| +.++|+++ +++++||.|+++.|||+|+.+++.|.+++++|++.|++||+|+.++.+.
T Consensus 5 ~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~-~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~ 83 (202)
T 1uul_A 5 EAEDLHPAPDFNETALMPNGTFKKVALTSY-KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYS 83 (202)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCcCCCcEeeeeecCCCccEEEHHHh-CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 3578999999999997 78 89999998 4445555555599999999999999999999999999999999999999
Q ss_pred HHHHHHHh-------CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccc
Q 025474 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 144 ~~~f~e~~-------~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~G 216 (252)
+++|.+++ +++|++++|++.+++++||+.... .+...|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~-----------------------------------~g~~~P 128 (202)
T 1uul_A 84 HLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEE-----------------------------------DGVAYR 128 (202)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETT-----------------------------------TTEECE
T ss_pred HHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCC-----------------------------------CCceee
Confidence 99999988 899999999999999999986321 012367
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 217 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 217 G~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
++||+|++ |+|++.+.+... ...+.++++++++
T Consensus 129 ~~~lid~~-G~i~~~~~g~~~-~~~~~~ell~~l~ 161 (202)
T 1uul_A 129 GLFIIDPK-QNLRQITVNDLP-VGRDVDEALRLVK 161 (202)
T ss_dssp EEEEECTT-SBEEEEEEECTT-BCCCHHHHHHHHH
T ss_pred EEEEECCC-CEEEEEEeCCCC-CCCCHHHHHHHHH
Confidence 89999998 699999987553 3357888888764
No 43
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.89 E-value=2.2e-22 Score=169.36 Aligned_cols=146 Identities=12% Similarity=0.104 Sum_probs=122.8
Q ss_pred CccccCCCCCcEEecC-CC--CeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHH
Q 025474 68 SEDTKNLLDTVKVYDV-NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~-~G--~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~ 144 (252)
.+.+|+.+|+|++.|. +| +.++|+++ +++++||.|++++||++|..+++.|.+++++|++.|++||+|+.++.+..
T Consensus 4 ~l~~G~~aP~f~l~~~~~g~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 82 (197)
T 1qmv_A 4 NARIGKPAPDFKATAVVDGAFKEVKLSDY-KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTH 82 (197)
T ss_dssp TBCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCeEeEeecCCCccEEEHHHH-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 3578999999999998 88 99999998 44555555555999999999999999999999999999999999999999
Q ss_pred HHHHHHh-------CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccce
Q 025474 145 RTFSEQT-------KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 145 ~~f~e~~-------~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG 217 (252)
++|.+++ +++|+++.|++.++.++||+.... .+...++
T Consensus 83 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~-----------------------------------~~~~~P~ 127 (197)
T 1qmv_A 83 LAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTD-----------------------------------EGIAYRG 127 (197)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETT-----------------------------------TTEECEE
T ss_pred HHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCC-----------------------------------CCceeeE
Confidence 9999887 899999999999999999985321 0123678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+||+|++ |+|++.+.+.... ..++++++++++
T Consensus 128 ~~lid~~-G~i~~~~~g~~~~-~~~~~e~l~~l~ 159 (197)
T 1qmv_A 128 LFIIDGK-GVLRQITVNDLPV-GRSVDEALRLVQ 159 (197)
T ss_dssp EEEECTT-SBEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred EEEECCC-CcEEEEEeCCCCC-CCCHHHHHHHHH
Confidence 9999998 6999999885443 457889988764
No 44
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.89 E-value=2.2e-22 Score=177.82 Aligned_cols=146 Identities=14% Similarity=0.099 Sum_probs=123.6
Q ss_pred ccccCCCCCcEEecCCCCeEeC-CCcc-CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPI-SDLW-KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~l-s~l~-~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~ 146 (252)
+.+|+.+|+|++.+.+| .++| ++++ +++++||+||++.|||+|..+++.|++++++|++.|++||+||.|+.+...+
T Consensus 5 ~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~ 83 (249)
T 3a2v_A 5 PLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIK 83 (249)
T ss_dssp CCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHH
Confidence 47899999999999999 7999 9985 5667889999999999999999999999999999999999999999988888
Q ss_pred HHHH------hCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEE
Q 025474 147 FSEQ------TKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 220 (252)
Q Consensus 147 f~e~------~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fV 220 (252)
|.+. .+++||+++|+++++.++||+..... | ....+++||
T Consensus 84 w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~----------------------------g------~~~~p~~fI 129 (249)
T 3a2v_A 84 WKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAES----------------------------A------THTVRGVFI 129 (249)
T ss_dssp HHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTC----------------------------S------SSCCEEEEE
T ss_pred HHHHHHHhcCCCCceeEEECCchHHHHHhCCccccC----------------------------C------CcccceEEE
Confidence 8775 47999999999999999999864210 0 023679999
Q ss_pred EeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 221 AGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 221 id~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
||++ |+|++.+.+..... .+.+||+++++
T Consensus 130 ID~d-G~I~~~~~~~~~~g-r~~~Ellr~I~ 158 (249)
T 3a2v_A 130 VDAR-GVIRTMLYYPMELG-RLVDEILRIVK 158 (249)
T ss_dssp ECTT-SBEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred ECCC-CeEEEEEecCCccc-chhHHHHHHHH
Confidence 9998 69999998754422 36888888764
No 45
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.89 E-value=1.9e-22 Score=169.61 Aligned_cols=144 Identities=10% Similarity=0.055 Sum_probs=122.1
Q ss_pred cccCCCCCcEEecC--CCC---eEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHH
Q 025474 70 DTKNLLDTVKVYDV--NGN---AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 70 ~~g~~ap~f~l~d~--~G~---~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~ 144 (252)
.+|+.+|+|++.|. +|+ .++|+++++++++||.|++++||++|+.+++.|.++++++.+.|++||+|+.|+.+.+
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 81 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVH 81 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHH
Confidence 57999999999998 899 9999998556666665555999999999999999999999999999999999999999
Q ss_pred HHHHHH-------hCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccce
Q 025474 145 RTFSEQ-------TKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 145 ~~f~e~-------~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG 217 (252)
++|.++ ++++|+++.|++.++.++||+.... | ...|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~------------------g------------------~~~P~ 125 (198)
T 1zof_A 82 FAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEE------------------A------------------IALRG 125 (198)
T ss_dssp HHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETT------------------T------------------EECEE
T ss_pred HHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccC------------------C------------------cccce
Confidence 999998 8999999999999999999986420 0 13568
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+||+|++ |+|++.+.+... ...+.++|+++++
T Consensus 126 ~~lid~~-G~i~~~~~g~~~-~~~~~~~l~~~l~ 157 (198)
T 1zof_A 126 AFLIDKN-MKVRHAVINDLP-LGRNADEMLRMVD 157 (198)
T ss_dssp EEEEETT-TEEEEEEEESSS-CCCHHHHHHHHHH
T ss_pred EEEECCC-CEEEEEEecCCC-CCCCHHHHHHHHH
Confidence 9999998 699999987433 3457788887664
No 46
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.88 E-value=6.1e-22 Score=169.88 Aligned_cols=140 Identities=17% Similarity=0.160 Sum_probs=117.2
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC--------C
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~--------~ 139 (252)
.+++|+.+|+|++.|.+|+.++|+++ ++++++|++||++|||+|+.+++.|+++++++++.|+++|+|+. +
T Consensus 31 ~l~~G~~aP~f~l~~~~G~~v~l~~~-~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d 109 (218)
T 3u5r_E 31 SITLGTRAADFVLPDAGGNLFTLAEF-KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEE 109 (218)
T ss_dssp CCCTTCBCCCCCEECTTCCEECGGGG-TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGG
T ss_pred cCCCCCcCCCcEeECCCCCEEeHHHh-CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccC
Confidence 46889999999999999999999998 44557888999999999999999999999999999999999999 6
Q ss_pred CHHHHHHHHHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEE
Q 025474 140 SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGII 219 (252)
Q Consensus 140 ~~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~f 219 (252)
+.+.+++|.++++++|+++.|++..+.++||+.. .|.+|
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~-----------------------------------------~P~~~ 148 (218)
T 3u5r_E 110 TLERVGAEVKAYGYGFPYLKDASQSVAKAYGAAC-----------------------------------------TPDFF 148 (218)
T ss_dssp SHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCE-----------------------------------------ESEEE
T ss_pred CHHHHHHHHHHhCCCccEEECCccHHHHHcCCCC-----------------------------------------CCeEE
Confidence 7889999999999999999999999988887631 34689
Q ss_pred EEeCCCCeEEEEEeCCCC----CCCCCHHHHHHHh
Q 025474 220 VAGPGKSNISYIHRDKEA----GDDPDIQDILKAC 250 (252)
Q Consensus 220 Vid~ggg~I~~~h~~~~~----~D~p~~~eIL~al 250 (252)
|+|++ |+|+|.....+. ...++.++|.+++
T Consensus 149 liD~~-G~i~~~g~~d~~~~~~~~~~~~~~l~~~i 182 (218)
T 3u5r_E 149 LYDRE-RRLVYHGQFDDARPGNGKDVTGADLRAAV 182 (218)
T ss_dssp EECTT-CBEEEEECSSSCCTTSCCCCCCHHHHHHH
T ss_pred EECCC-CcEEEeccccccccccccccCHHHHHHHH
Confidence 99998 699987654332 2233445555544
No 47
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.88 E-value=2e-21 Score=154.86 Aligned_cols=137 Identities=14% Similarity=0.126 Sum_probs=118.6
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC-CHHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTF 147 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~-~~~~~~~f 147 (252)
+++|+.+|+|++.| +|+.++++++ +++++|++|++.||+.|+.+++.|.++++++.+.|+.+|+|+.+ +.+.+++|
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~--~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~ 79 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDK--TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKF 79 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGG--TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHh--CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHH
Confidence 57899999999999 9999999998 45667777779999999999999999999999999999999998 55789999
Q ss_pred HHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCe
Q 025474 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~ 227 (252)
.++++++|+++.|++..+.+.||+.. .|..||+|++ |+
T Consensus 80 ~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~-G~ 117 (152)
T 3gl3_A 80 LAQVPAEFTVAFDPKGQTPRLYGVKG-----------------------------------------MPTSFLIDRN-GK 117 (152)
T ss_dssp HHHSCCCSEEEECTTCHHHHHTTCCS-----------------------------------------SSEEEEECTT-SB
T ss_pred HHHcCCCCceeECCcchhHHHcCCCC-----------------------------------------CCeEEEECCC-CC
Confidence 99999999999999999888887631 3478999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHh
Q 025474 228 ISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 228 I~~~h~~~~~~D~p~~~eIL~al 250 (252)
|++.+.+....+..++++.|+.+
T Consensus 118 i~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 118 VLLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp EEEEEESCCTTTHHHHHHHHHHH
T ss_pred EEEEEccCCCcCHHHHHHHHHHH
Confidence 99999987766666666666654
No 48
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.87 E-value=1.9e-21 Score=155.30 Aligned_cols=137 Identities=15% Similarity=0.148 Sum_probs=120.5
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC--HHHHHHH
Q 025474 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS--VEQARTF 147 (252)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~--~~~~~~f 147 (252)
.+|+.+|+|++.|.+|+.++++++ +++.+|++|++.||+.|+.+++.|.++++++.+.++.+++|+.+. .+.+++|
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~--~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 80 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGEVVKLSDL--KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEF 80 (154)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHH
T ss_pred CCCCCCCCeEEEcCCCCEEehhhc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHH
Confidence 679999999999999999999998 455667777799999999999999999999999999999999987 6789999
Q ss_pred HHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCe
Q 025474 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~ 227 (252)
.++++++|+++.|++..+.+.||+.. .|.+||+|++ |+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~-G~ 118 (154)
T 3kcm_A 81 FRKTGFTLPVLLDADKRVGKLYGTTG-----------------------------------------VPETFVIDRH-GV 118 (154)
T ss_dssp HHHHCCCCCEEECTTCHHHHHHTCCS-----------------------------------------BCEEEEECTT-SB
T ss_pred HHHcCCCeeEEecCchHHHHHhCCCC-----------------------------------------CCeEEEECCC-Cc
Confidence 99999999999999998888877531 3469999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHh
Q 025474 228 ISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 228 I~~~h~~~~~~D~p~~~eIL~al 250 (252)
|++.+.+....+.+++.+.|+.+
T Consensus 119 i~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 119 ILKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp EEEEEESCCCTTSHHHHHHHHTC
T ss_pred EEEEEcCCCccccHHHHHHHHHH
Confidence 99999998877887777777765
No 49
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.87 E-value=5e-21 Score=151.09 Aligned_cols=130 Identities=13% Similarity=0.109 Sum_probs=110.0
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHH---cHHHHHhCCCEEEEEeCC-CHHHHH
Q 025474 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPG-SVEQAR 145 (252)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~---~~~~l~~~Gv~vV~Vs~~-~~~~~~ 145 (252)
++|+.+|+|++.|.+|+.++++++ +++++|++||++||++|+.+++.|.+ +++++++.|+.+|+|+.+ +.+..+
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~ 79 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRL--KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWA 79 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGC--CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHH
T ss_pred CCCCcCCCCEEECCCCCEEEhhhc--CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHH
Confidence 579999999999999999999998 56788888899999999999999998 899999999999999998 567889
Q ss_pred HHHHHhCCCceeeecCChHHHH--HcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeC
Q 025474 146 TFSEQTKFKGEVYADPNHSSYE--ALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 146 ~f~e~~~~~fpll~Dp~~~ly~--alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ 223 (252)
+|.++++++|+++.|++..+.. .||+. ..|.+||+|+
T Consensus 80 ~~~~~~~~~~~~~~d~~~~~~~~~~~~v~-----------------------------------------~~P~~~lid~ 118 (142)
T 3ewl_A 80 TKAVYMPQGWIVGWNKAGDIRTRQLYDIR-----------------------------------------ATPTIYLLDG 118 (142)
T ss_dssp HHHTTSCTTCEEEECTTCHHHHTTCSCCC-----------------------------------------SSSEEEEECT
T ss_pred HHHHHcCCCcceeeCCccchhhHHHcCCC-----------------------------------------CCCeEEEECC
Confidence 9999999999999999887765 44431 1457999999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 224 GKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 224 ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+ |+|++. ..+.+++.+.+.
T Consensus 119 ~-G~i~~~--------~~~~~~l~~~l~ 137 (142)
T 3ewl_A 119 R-KRVILK--------DTSMEQLIDYLA 137 (142)
T ss_dssp T-CBEEEC--------SCCHHHHHHHHH
T ss_pred C-CCEEec--------CCCHHHHHHHHH
Confidence 8 699872 256677766654
No 50
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.86 E-value=4e-21 Score=156.59 Aligned_cols=153 Identities=12% Similarity=0.181 Sum_probs=119.9
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCH-hHHHHHHHHHHcHHHHHhCC--CEEEEEeCC----C
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDASG--VALVLIGPG----S 140 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp-~C~~el~~L~~~~~~l~~~G--v~vV~Vs~~----~ 140 (252)
.+.+|+.+|+|++.|.+|+.++++++ +++++|++||++||+ .|+.+++.|.++++++++.| ++||+|+.+ +
T Consensus 6 ~l~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~ 83 (174)
T 1xzo_A 6 KDPLNYEVEPFTFQNQDGKNVSLESL--KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDK 83 (174)
T ss_dssp CSCCCEECCCCEEECTTSCEEETGGG--TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred cCccccccCCcEEEcCCCCEEehhhc--CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCC
Confidence 46789999999999999999999998 456677788899999 99999999999999999887 999999986 6
Q ss_pred HHHHHHHHHHhCCCc---eeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccce
Q 025474 141 VEQARTFSEQTKFKG---EVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 141 ~~~~~~f~e~~~~~f---pll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG 217 (252)
.+.+++|.++++++| +++.|++.++.++|++... ... +... .+ ..+....+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~-~~~----------------~~~~-----~~---~~~~~~~p~ 138 (174)
T 1xzo_A 84 PKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSF-KAI----------------VKKP-----EG---EDQVIHQSS 138 (174)
T ss_dssp HHHHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHH-CCC----------------CCCC-----SS---CCSCCSCCE
T ss_pred HHHHHHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhc-Cee----------------Eeec-----CC---CCeeeeeeE
Confidence 789999999999999 9999999998887765210 000 0000 00 001124678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+||||++ |+|++.|.+... .+.++|++.++
T Consensus 139 ~~lid~~-G~i~~~~~g~~~---~~~~~l~~~l~ 168 (174)
T 1xzo_A 139 FYLVGPD-GKVLKDYNGVEN---TPYDDIISDVK 168 (174)
T ss_dssp EEEECTT-SEEEEEEESSSS---CCHHHHHHHHH
T ss_pred EEEECCC-CeEEEEEcCCCC---CCHHHHHHHHH
Confidence 9999998 699999987553 35667766553
No 51
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.86 E-value=7.2e-21 Score=158.44 Aligned_cols=140 Identities=15% Similarity=0.129 Sum_probs=116.8
Q ss_pred CccccCCCCCcEEe-cCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC--------
Q 025474 68 SEDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-------- 138 (252)
Q Consensus 68 ~~~~g~~ap~f~l~-d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~-------- 138 (252)
.+.+|+.+|+|++. |.+|+.++++++ ++++.+|++|+++||++|+.+++.|.++++++.+.|+.+|+|+.
T Consensus 17 ~~~~g~~~p~f~l~~~~~G~~~~l~~~-~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~ 95 (196)
T 2ywi_A 17 MFPLGKQAPPFALTNVIDGNVVRLEDV-KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPE 95 (196)
T ss_dssp CCCTTCBCCCCEEEETTTCCEEEHHHH-CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGG
T ss_pred CCCcCCcCCceeeeecCCCCEEeHHHh-CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccc
Confidence 46789999999999 999999999998 44445778889999999999999999999999999999999998
Q ss_pred CCHHHHHHHHHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceE
Q 025474 139 GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 218 (252)
Q Consensus 139 ~~~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~ 218 (252)
++.+.+++|.++++++|+++.|++..+.+.||+.. .|.+
T Consensus 96 d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~ 134 (196)
T 2ywi_A 96 DSPENMKKVAEELGYPFPYLYDETQEVAKAYDAAC-----------------------------------------TPDF 134 (196)
T ss_dssp GSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCE-----------------------------------------ESEE
T ss_pred cCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCC-----------------------------------------CCeE
Confidence 57789999999999999999999999888887521 3468
Q ss_pred EEEeCCCCeEEEEEeCCCC----CCCCCHHHHHHHh
Q 025474 219 IVAGPGKSNISYIHRDKEA----GDDPDIQDILKAC 250 (252)
Q Consensus 219 fVid~ggg~I~~~h~~~~~----~D~p~~~eIL~al 250 (252)
||+|++ |+|++.+...+. ....+.++|.+++
T Consensus 135 ~lid~~-G~i~~~~~~~~~~~~~~g~~~~~~l~~~i 169 (196)
T 2ywi_A 135 YIFDRD-LKCVYRGQLDDSRPNNGIPVTGESIRAAL 169 (196)
T ss_dssp EEEETT-CBEEEEECSSSCCTTTCCCCCCHHHHHHH
T ss_pred EEEcCC-CeEEEccccCcccccccCccCHHHHHHHH
Confidence 999998 699999875432 2233555665554
No 52
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.86 E-value=5.2e-21 Score=158.26 Aligned_cols=143 Identities=15% Similarity=0.219 Sum_probs=118.5
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH--HHHH
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV--EQAR 145 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~--~~~~ 145 (252)
....|+.+|+|++.|.+|+.++++++ +++++|++||++||+.|+.+++.|.++++++.+.++++|+|+.+.. +.++
T Consensus 33 ~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~ 110 (186)
T 1jfu_A 33 MASAPLKLPDLAFEDADGKPKKLSDF--RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPK 110 (186)
T ss_dssp ECCSCCBCCCCEEECTTSCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHH
T ss_pred cccCCCcCCCcEeEcCCCCEeeHHHc--CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHH
Confidence 35779999999999999999999998 4567777888999999999999999999999888999999999864 6889
Q ss_pred HHHHHhCC-CceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCC
Q 025474 146 TFSEQTKF-KGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 224 (252)
Q Consensus 146 ~f~e~~~~-~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~g 224 (252)
+|.+++++ .|+++.|++..++++||+.... ...|.+||+|++
T Consensus 111 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-------------------------------------~~~P~~~lid~~ 153 (186)
T 1jfu_A 111 TFLKEANLTRLGYFNDQKAKVFQDLKAIGRA-------------------------------------LGMPTSVLVDPQ 153 (186)
T ss_dssp HHHHHTTCCTTCCEECTTCHHHHHHHTTTCC-------------------------------------SSSSEEEEECTT
T ss_pred HHHHHcCCCCCceEECCcchHHHHhcccccc-------------------------------------CCCCEEEEECCC
Confidence 99999999 4999999999998888764210 114689999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025474 225 KSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 225 gg~I~~~h~~~~~~D~p~~~eIL~al 250 (252)
|+|++.|.+....+..++.+.|+.+
T Consensus 154 -G~i~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 154 -GCEIATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp -SBEEEEEESCCCTTSHHHHHHHHHH
T ss_pred -CCEEEEEecCCccCHHHHHHHHHHH
Confidence 6999999886544455555555544
No 53
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.85 E-value=2.4e-20 Score=154.11 Aligned_cols=136 Identities=19% Similarity=0.231 Sum_probs=114.5
Q ss_pred ccccCCCCCcEEecC--CCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCC------EEEEEeCCC
Q 025474 69 EDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGV------ALVLIGPGS 140 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~--~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv------~vV~Vs~~~ 140 (252)
+..|+.+|+|++.|. +|+.++++++ +++++|++|++.||+.|+.+++.|.++++++.+.|+ .+|+|+.++
T Consensus 31 ~~~g~~~p~f~l~~~~~~g~~~~l~~~--~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~ 108 (183)
T 3lwa_A 31 EADRQQLPDIGGDSLMEEGTQINLSDF--ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD 108 (183)
T ss_dssp GGGCCCCCCCEEEBSSSTTCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC
T ss_pred cccCCCCCceeccccccCCcEecHHHh--CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC
Confidence 578999999999999 9999999998 456777788899999999999999999999999999 999999987
Q ss_pred --HHHHHHHHHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceE
Q 025474 141 --VEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 218 (252)
Q Consensus 141 --~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~ 218 (252)
.+.+++|.++++++|+++.|++..+.++||... . ...|.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-v-------------------------------------~~~P~~ 150 (183)
T 3lwa_A 109 YSRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVP-A-------------------------------------SVIPTT 150 (183)
T ss_dssp CCHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCC-T-------------------------------------TCCSEE
T ss_pred CCHHHHHHHHHHcCCCccEEECCcchHHHHhccCC-C-------------------------------------CCCCeE
Confidence 789999999999999999999988777776210 0 124679
Q ss_pred EEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025474 219 IVAGPGKSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 219 fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al 250 (252)
||+|++ |+|++.|.+. .+.+++.+.+
T Consensus 151 ~lid~~-G~i~~~~~g~-----~~~~~l~~~l 176 (183)
T 3lwa_A 151 IVLDKQ-HRPAAVFLRE-----VTSKDVLDVA 176 (183)
T ss_dssp EEECTT-SCEEEEECSC-----CCHHHHHHHH
T ss_pred EEECCC-CcEEEEEcCC-----CCHHHHHHHH
Confidence 999998 6999988863 3566666654
No 54
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.85 E-value=7.2e-21 Score=157.90 Aligned_cols=149 Identities=8% Similarity=0.004 Sum_probs=111.9
Q ss_pred CCCCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC-----
Q 025474 65 PSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----- 139 (252)
Q Consensus 65 ~~~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~----- 139 (252)
+....++|+.+|+|++.|.+|+.++++++ +++++|++||++|||+|+.+++.|+++++++++.|++||+|+.+
T Consensus 17 ~~~~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 94 (183)
T 2obi_A 17 SRDDWRCARSMHEFSAKDIDGHMVNLDKY--RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQ 94 (183)
T ss_dssp --CCGGGCCSGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTC
T ss_pred cccCCcccCcccceEEEcCCCCEeeHHHc--CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCC
Confidence 44567899999999999999999999998 55778888899999999999999999999999999999999974
Q ss_pred ---CHHHHHHHHHHhCCCceeee--cCChH----HHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCC
Q 025474 140 ---SVEQARTFSEQTKFKGEVYA--DPNHS----SYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSR 210 (252)
Q Consensus 140 ---~~~~~~~f~e~~~~~fpll~--Dp~~~----ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g 210 (252)
+.+.+++|.++++++||++. |++.. +|+.++..... .+..+.
T Consensus 95 e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~-------------------------~g~~~~---- 145 (183)
T 2obi_A 95 EPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKG-------------------------KGILGN---- 145 (183)
T ss_dssp CCSCHHHHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTT-------------------------CCSSSS----
T ss_pred CCCCHHHHHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccCCC-------------------------CCcccc----
Confidence 57899999999999999997 66543 23222111000 000010
Q ss_pred CccccceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025474 211 GGWQQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 211 ~~~q~GG~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al 250 (252)
+....|.+||||++ |+|++.+.+. .+.++|.+.+
T Consensus 146 ~i~~~P~~~lid~~-G~i~~~~~g~-----~~~~~l~~~i 179 (183)
T 2obi_A 146 AIKWNFTKFLIDKN-GCVVKRYGPM-----EEPLVIEKDL 179 (183)
T ss_dssp SCCSTTCEEEECTT-SCEEEEECTT-----SCTHHHHTTS
T ss_pred cccccceEEEECCC-CCEEEEeCCC-----CCHHHHHHHH
Confidence 01225789999998 6999998763 2345665544
No 55
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.85 E-value=5.9e-21 Score=154.22 Aligned_cols=139 Identities=11% Similarity=0.076 Sum_probs=119.6
Q ss_pred CCCCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHH
Q 025474 65 PSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (252)
Q Consensus 65 ~~~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~ 144 (252)
....+.+|+.+|+|++.|.+|+.++++++ +++.+|++|++.||+.|+.+++.|.++++++.+.++.+|+|+.++ .+
T Consensus 11 ~~~~~~~G~~~p~f~l~~~~g~~~~l~~~--~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~--~~ 86 (158)
T 3hdc_A 11 DAPLVRTGALAPNFKLPTLSGENKSLAQY--RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK--RF 86 (158)
T ss_dssp CSCCCCTTSBCCCCEEECTTSCEEESGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS--SC
T ss_pred CCcccCCCCcCCCceeEcCCCCEEehHHh--CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH--HH
Confidence 44457899999999999999999999998 445667777799999999999999999999998899999999987 67
Q ss_pred HHHHHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCC
Q 025474 145 RTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 224 (252)
Q Consensus 145 ~~f~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~g 224 (252)
++|.++++++|+++.|++..+.+.||+.. .|.+||+|++
T Consensus 87 ~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~ 125 (158)
T 3hdc_A 87 PEKYRRAPVSFNFLSDATGQVQQRYGANR-----------------------------------------LPDTFIVDRK 125 (158)
T ss_dssp CGGGGGCCCSCEEEECTTSHHHHHTTCCS-----------------------------------------SSEEEEECTT
T ss_pred HHHHHHcCCCceEEECchHHHHHHhCCCC-----------------------------------------cceEEEEcCC
Confidence 88999999999999999999888887531 3468999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHH
Q 025474 225 KSNISYIHRDKEAGDDPDIQDILKA 249 (252)
Q Consensus 225 gg~I~~~h~~~~~~D~p~~~eIL~a 249 (252)
|+|++.+.+....|.+++.+-++.
T Consensus 126 -G~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 126 -GIIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp -SBEEEEEESCCCTTSHHHHHHHHT
T ss_pred -CCEEEEEeCCCccchHHHHHHHHh
Confidence 699999999888887776665543
No 56
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.85 E-value=1.4e-20 Score=150.54 Aligned_cols=122 Identities=11% Similarity=0.007 Sum_probs=107.4
Q ss_pred CccccCCCCCcEEecCCCCeEeCC--CccCCCcEEEEEEcCCCCHh--HHHHHHHHHHcHHHH-HhCCCEEEEEeCCCH-
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPIS--DLWKDRKAVVAFARHFGCVL--CRKRADYLAAKKDVM-DASGVALVLIGPGSV- 141 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls--~l~~~~~vvlvF~R~~~Cp~--C~~el~~L~~~~~~l-~~~Gv~vV~Vs~~~~- 141 (252)
.+.+|+.+|+|++.|.+|+.++++ ++ +++++|++||++||++ |+.+++.|.++++++ ++.|+.+|+|+.++.
T Consensus 4 ~l~~G~~~p~f~l~~~~g~~~~l~~~~~--~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~ 81 (150)
T 3fw2_A 4 KSEIGKYAPFFSLPNAKGEKITRSSDAF--KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDK 81 (150)
T ss_dssp TTSTTSBCCCCCEEBTTCCEECTTSTTT--TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCH
T ss_pred cccCCCcCCccEeECCCCCEEecchhhh--CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCH
Confidence 468899999999999999999999 88 5577888889999999 999999999999999 888999999999865
Q ss_pred HHHHHHHHHhCCCceeeecC---ChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceE
Q 025474 142 EQARTFSEQTKFKGEVYADP---NHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 218 (252)
Q Consensus 142 ~~~~~f~e~~~~~fpll~Dp---~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~ 218 (252)
+.+++|.++++++|+++.|+ +..+.+.||+. ..|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~ 120 (150)
T 3fw2_A 82 QQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIY-----------------------------------------KIPAN 120 (150)
T ss_dssp HHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC-----------------------------------------SSSEE
T ss_pred HHHHHHHHHhCCCceEEEcCcccchHHHHHcCCC-----------------------------------------ccCeE
Confidence 78999999999999999998 56777777652 13579
Q ss_pred EEEeCCCCeEEEEEe
Q 025474 219 IVAGPGKSNISYIHR 233 (252)
Q Consensus 219 fVid~ggg~I~~~h~ 233 (252)
||+|++ |+|++.+.
T Consensus 121 ~lid~~-G~i~~~~~ 134 (150)
T 3fw2_A 121 ILLSSD-GKILAKNL 134 (150)
T ss_dssp EEECTT-SBEEEESC
T ss_pred EEECCC-CEEEEccC
Confidence 999998 69999884
No 57
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.85 E-value=2.5e-20 Score=147.80 Aligned_cols=131 Identities=9% Similarity=0.046 Sum_probs=109.3
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHH---cHHHHHhCCCEEEEEeCCCH-HHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPGSV-EQA 144 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~---~~~~l~~~Gv~vV~Vs~~~~-~~~ 144 (252)
..+|+.+|+|++.|.+|+.++|+++ .++.+|++||++||++|+.+++.|.+ +++++++.|+.+|+|+.++. +..
T Consensus 5 ~~~G~~ap~f~l~~~~g~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~ 82 (142)
T 3eur_A 5 NRLGTKALNFTYTLDSGVKGTLYQF--PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEW 82 (142)
T ss_dssp TCTTSBCCCCEEEETTSCEEETTTC--CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHH
T ss_pred hcCCCccCCcEEEcCCCCEeeHHHc--CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHH
Confidence 4789999999999999999999998 45778888899999999999999999 89999999999999999876 678
Q ss_pred HHHHHHhCCCceeeecCChH--HHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEe
Q 025474 145 RTFSEQTKFKGEVYADPNHS--SYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 222 (252)
Q Consensus 145 ~~f~e~~~~~fpll~Dp~~~--ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid 222 (252)
++|.++++++++.+.|++.. +.+.||+ ...|.+||+|
T Consensus 83 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~v-----------------------------------------~~~P~~~lid 121 (142)
T 3eur_A 83 KKHRNDFAKEWTNGYDKELVIKNKNLYDL-----------------------------------------RAIPTLYLLD 121 (142)
T ss_dssp HHHGGGSCTTSEEEECTTCHHHHTTCSCC-----------------------------------------TTCSEEEEEC
T ss_pred HHHHHhcccccccccCccchhhhhhhcCC-----------------------------------------CcCCeEEEEC
Confidence 99999999999999998765 2222221 1256899999
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 223 PGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 223 ~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
++ |+|++.+.+ .++|.+.++
T Consensus 122 ~~-G~i~~~~~~--------~~~l~~~l~ 141 (142)
T 3eur_A 122 KN-KTVLLKDAT--------LQKVEQYLA 141 (142)
T ss_dssp TT-CBEEEEEEC--------HHHHHHHHH
T ss_pred CC-CcEEecCCC--------HHHHHHHHh
Confidence 98 699998763 566666654
No 58
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.85 E-value=9.5e-21 Score=150.37 Aligned_cols=122 Identities=9% Similarity=-0.032 Sum_probs=99.2
Q ss_pred CCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC-CHHHHH
Q 025474 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQAR 145 (252)
Q Consensus 67 ~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~-~~~~~~ 145 (252)
..+.+|+.+|+|++ |.+|+.++++++ +++++|++||++||++|+.+++.|.++++++++.|+.+|+|+.+ +.+..+
T Consensus 5 ~~l~~G~~~P~f~l-~~~g~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~ 81 (143)
T 4fo5_A 5 EGVNPGDLAPRIEF-LGNDAKASFHNQ--LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFT 81 (143)
T ss_dssp BSSSTTSBCCCCCC------CCCSCCS--SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHH
T ss_pred cccCCcccCCceEE-cCCCCEEEHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHH
Confidence 35689999999999 999999999998 55788889999999999999999999999999889999999998 457899
Q ss_pred HHHHHhCCCc-eeeecCC---hHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEE
Q 025474 146 TFSEQTKFKG-EVYADPN---HSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 146 ~f~e~~~~~f-pll~Dp~---~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVi 221 (252)
+|.++++++| +++.|++ ..+.+.||+. ..|.+||+
T Consensus 82 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~li 120 (143)
T 4fo5_A 82 ETVKIDKLDLSTQFHEGLGKESELYKKYDLR-----------------------------------------KGFKNFLI 120 (143)
T ss_dssp HHHHHHTCCGGGEEECTTGGGSHHHHHTTGG-----------------------------------------GCCCEEEE
T ss_pred HHHHHhCCCCceeeecccccchHHHHHcCCC-----------------------------------------CCCcEEEE
Confidence 9999999999 7899974 3455555431 14579999
Q ss_pred eCCCCeEEEEEe
Q 025474 222 GPGKSNISYIHR 233 (252)
Q Consensus 222 d~ggg~I~~~h~ 233 (252)
|++ |+|++.+.
T Consensus 121 d~~-G~i~~~~~ 131 (143)
T 4fo5_A 121 NDE-GVIIAANV 131 (143)
T ss_dssp CTT-SBEEEESC
T ss_pred CCC-CEEEEccC
Confidence 998 69998764
No 59
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.85 E-value=2.5e-20 Score=149.39 Aligned_cols=133 Identities=19% Similarity=0.245 Sum_probs=110.8
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC-HHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTF 147 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~-~~~~~~f 147 (252)
+.+|+.+|+|++.|.+|+.++++++ +++++|++|+++||++|+.+++.|.++++++.+.|+.+++|+.+. .+..++|
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDF--KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKA 80 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGG--TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHc--CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 4689999999999999999999998 456777777899999999999999999999999999999999985 5788999
Q ss_pred HHHhCCCceeeecC---ChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCC
Q 025474 148 SEQTKFKGEVYADP---NHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 224 (252)
Q Consensus 148 ~e~~~~~fpll~Dp---~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~g 224 (252)
.++++++|+++.|+ +..+.++||+. ..|..||+|++
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~ 119 (152)
T 2lrn_A 81 IEEDKSYWNQVLLQKDDVKDVLESYCIV-----------------------------------------GFPHIILVDPE 119 (152)
T ss_dssp HHHHTCCSEEEEECHHHHHHHHHHTTCC-----------------------------------------SSCEEEEECTT
T ss_pred HHHhCCCCeEEecccchhHHHHHHhCCC-----------------------------------------cCCeEEEECCC
Confidence 99999999999998 56666666642 13578999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025474 225 KSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 225 gg~I~~~h~~~~~~D~p~~~eIL~al 250 (252)
|+|++.+.. -.++++.|+.+
T Consensus 120 -G~i~~~~~~-----~~~l~~~l~~l 139 (152)
T 2lrn_A 120 -GKIVAKELR-----GDDLYNTVEKF 139 (152)
T ss_dssp -SEEEEECCC-----TTHHHHHHHHH
T ss_pred -CeEEEeeCC-----HHHHHHHHHHH
Confidence 699998842 23455555544
No 60
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.85 E-value=1.3e-20 Score=151.30 Aligned_cols=121 Identities=12% Similarity=0.139 Sum_probs=105.0
Q ss_pred ccCCCCCcEEec--CCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHH-HHHHHHcHHHHHhCCCEEEEEeC-------CC
Q 025474 71 TKNLLDTVKVYD--VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVALVLIGP-------GS 140 (252)
Q Consensus 71 ~g~~ap~f~l~d--~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~Gv~vV~Vs~-------~~ 140 (252)
.|+.+|+|++.| .+|+.++++++ +++++|++||++||++|+.+ ++.|.++++++.+.|+.+|+|+. ++
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~--~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 79 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADL--RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMT 79 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGG--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred CCCcCCCceehhhhcCCCccCHHHh--CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCC
Confidence 488999999999 48999999998 46778888889999999997 99999999999988999999995 57
Q ss_pred HHHHHHHHHHhCCCceeeecCCh-----HHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCcccc
Q 025474 141 VEQARTFSEQTKFKGEVYADPNH-----SSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 215 (252)
Q Consensus 141 ~~~~~~f~e~~~~~fpll~Dp~~-----~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~ 215 (252)
.+.+++|.++++++|+++.|++. .+.+.||+. ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~-----------------------------------------~~ 118 (158)
T 3eyt_A 80 PISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMR-----------------------------------------GT 118 (158)
T ss_dssp HHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCC-----------------------------------------SS
T ss_pred HHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCC-----------------------------------------CC
Confidence 89999999999999999999887 566666542 14
Q ss_pred ceEEEEeCCCCeEEEEEeCC
Q 025474 216 GGIIVAGPGKSNISYIHRDK 235 (252)
Q Consensus 216 GG~fVid~ggg~I~~~h~~~ 235 (252)
|.+||+|++ |+|++.+.+.
T Consensus 119 P~~~lid~~-G~i~~~~~g~ 137 (158)
T 3eyt_A 119 PSLLLIDKA-GDLRAHHFGD 137 (158)
T ss_dssp SEEEEECTT-SEEEEEEESC
T ss_pred CEEEEECCC-CCEEEEEeCC
Confidence 579999998 6999999874
No 61
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.85 E-value=5.7e-20 Score=146.66 Aligned_cols=131 Identities=19% Similarity=0.215 Sum_probs=111.1
Q ss_pred ccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC-CHHHHHHHHH
Q 025474 71 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSE 149 (252)
Q Consensus 71 ~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~-~~~~~~~f~e 149 (252)
+|+.+|+|++.|.+|+.++++++ +++.+|++|++.||++|+.+++.|.++++++.+.|+.+++|+.+ +.+.+++|.+
T Consensus 2 ~G~~~p~~~l~~~~g~~~~l~~~--~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~ 79 (151)
T 2f9s_A 2 EGSDAPNFVLEDTNGKRIELSDL--KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMK 79 (151)
T ss_dssp CCEECCCCEEECTTCCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHH
T ss_pred CCCcCCcceeEcCCCCEEEHHHc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHH
Confidence 68999999999999999999998 45566777779999999999999999999999899999999986 4578999999
Q ss_pred HhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCeEE
Q 025474 150 QTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNIS 229 (252)
Q Consensus 150 ~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~I~ 229 (252)
+++++|+++.|++..+.+.||+.. .|.+||+|++ |+|+
T Consensus 80 ~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~-G~i~ 117 (151)
T 2f9s_A 80 SYGVNFPVVLDTDRQVLDAYDVSP-----------------------------------------LPTTFLINPE-GKVV 117 (151)
T ss_dssp HHTCCSCEEEETTSHHHHHTTCCS-----------------------------------------SCEEEEECTT-SEEE
T ss_pred HcCCCceEEECCchHHHHhcCCCC-----------------------------------------CCeEEEECCC-CcEE
Confidence 999999999999999888887521 3468999998 6999
Q ss_pred EEEeCCCCCCCCCHHHHHHHh
Q 025474 230 YIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 230 ~~h~~~~~~D~p~~~eIL~al 250 (252)
+.+.+. .+.+++.+.+
T Consensus 118 ~~~~G~-----~~~~~l~~~l 133 (151)
T 2f9s_A 118 KVVTGT-----MTESMIHDYM 133 (151)
T ss_dssp EEEESC-----CCHHHHHHHH
T ss_pred EEEeCC-----CCHHHHHHHH
Confidence 988863 2455555544
No 62
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.84 E-value=9.7e-21 Score=149.41 Aligned_cols=134 Identities=13% Similarity=0.040 Sum_probs=115.1
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC-CHHHHHH
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQART 146 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~-~~~~~~~ 146 (252)
...+|+.+|+|++.|.+|+.++++++ +++++|++|+++||+.|+.+++.|.++++++.+.|+.+++|+.+ +.+.+++
T Consensus 4 ~~~~G~~~p~~~l~~~~g~~~~l~~~--~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 81 (148)
T 3hcz_A 4 PLLLGKKAPNLYMTDTTGTYRYLYDV--QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLK 81 (148)
T ss_dssp CCCTTSBCCCCCCBCTTSCBCCGGGC--CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHH
T ss_pred ccCCCCcCCceEEecCCCCEEEhHHc--CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHH
Confidence 35789999999999999999999998 55677778889999999999999999999999999999999998 5589999
Q ss_pred HHHHhCCC-ceeeecCChH--HHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeC
Q 025474 147 FSEQTKFK-GEVYADPNHS--SYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 147 f~e~~~~~-fpll~Dp~~~--ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ 223 (252)
|.++++++ |+++.|++.. +.+.||+. ..|..||+|+
T Consensus 82 ~~~~~~~~~~~~~~d~~~~~~~~~~~~i~-----------------------------------------~~P~~~lid~ 120 (148)
T 3hcz_A 82 FIRSKKIGGWLNVRDSKNHTDFKITYDIY-----------------------------------------ATPVLYVLDK 120 (148)
T ss_dssp HHHHHTCTTSEEEECTTCCCCHHHHHCCC-----------------------------------------SSCEEEEECT
T ss_pred HHHHcCCCCceEEeccccchhHHHhcCcC-----------------------------------------CCCEEEEECC
Confidence 99999999 9999999877 66666642 1457999999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025474 224 GKSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 224 ggg~I~~~h~~~~~~D~p~~~eIL~al 250 (252)
+ |+|++.+.+. .+++++++.+
T Consensus 121 ~-G~i~~~~~g~-----~~~~~~l~~l 141 (148)
T 3hcz_A 121 N-KVIIAKRIGY-----ENLDDFLVQY 141 (148)
T ss_dssp T-CBEEEESCCG-----GGHHHHHHHH
T ss_pred C-CcEEEecCCH-----HHHHHHHHHH
Confidence 8 6999887653 6778887765
No 63
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.84 E-value=2.8e-20 Score=149.40 Aligned_cols=121 Identities=19% Similarity=0.201 Sum_probs=107.1
Q ss_pred ccCCCCCcEEec-CCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHH-HHHHHHcHHHHHhCCCEEEEEeC-------CCH
Q 025474 71 TKNLLDTVKVYD-VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVALVLIGP-------GSV 141 (252)
Q Consensus 71 ~g~~ap~f~l~d-~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~Gv~vV~Vs~-------~~~ 141 (252)
.|.++|+|++.| .+|+.++++++ +++++|++||++||+.|+.+ ++.|.++++++.+.|+.+|+|+. ++.
T Consensus 5 ~g~~~p~~~~~~~~~g~~~~l~~~--~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~ 82 (160)
T 3lor_A 5 DNAPLLELDVQEWVNHEGLSNEDL--RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTP 82 (160)
T ss_dssp TTCCBCCCCEEEESSSCCCCHHHH--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCH
T ss_pred CCCcCCCcccccccCCCccCHHHh--CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCH
Confidence 689999999999 89999999998 56788888899999999996 99999999999999999999997 688
Q ss_pred HHHHHHHHHhCCCceeeecCChH------HHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCcccc
Q 025474 142 EQARTFSEQTKFKGEVYADPNHS------SYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 215 (252)
Q Consensus 142 ~~~~~f~e~~~~~fpll~Dp~~~------ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~ 215 (252)
+.+++|.++++++|+++.|++.. +++.||+. ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~-----------------------------------------~~ 121 (160)
T 3lor_A 83 EALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLE-----------------------------------------GT 121 (160)
T ss_dssp HHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCC-----------------------------------------SS
T ss_pred HHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccC-----------------------------------------cc
Confidence 99999999999999999999887 77776652 13
Q ss_pred ceEEEEeCCCCeEEEEEeCC
Q 025474 216 GGIIVAGPGKSNISYIHRDK 235 (252)
Q Consensus 216 GG~fVid~ggg~I~~~h~~~ 235 (252)
|.+||+|++ |+|++.|.+.
T Consensus 122 P~~~lid~~-G~i~~~~~g~ 140 (160)
T 3lor_A 122 PSIILADRK-GRIRQVQFGQ 140 (160)
T ss_dssp SEEEEECTT-SBEEEEEESC
T ss_pred ceEEEECCC-CcEEEEecCc
Confidence 578999998 6999998874
No 64
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.83 E-value=1.1e-19 Score=150.80 Aligned_cols=101 Identities=16% Similarity=0.121 Sum_probs=92.2
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC--------C
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~--------~ 139 (252)
.+.+|+.+|+|++.|.+|+.++++++ +++++|++|+++||++|+.+++.|+++++++.+. +.+|+|+. +
T Consensus 6 ~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d 82 (188)
T 2cvb_A 6 ELPLESPLIDAELPDPRGGRYRLSQF--HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPED 82 (188)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGC--CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGG
T ss_pred cCCCCCCCCCceeecCCCCEEeHHHh--CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCcccccccc
Confidence 46789999999999999999999998 4567777788999999999999999999999888 99999998 5
Q ss_pred CHHHHHHHHHHhCCCceeeecCChHHHHHcCC
Q 025474 140 SVEQARTFSEQTKFKGEVYADPNHSSYEALSF 171 (252)
Q Consensus 140 ~~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv 171 (252)
+.+.+++|.++++++|+++.|++..+.+.||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 114 (188)
T 2cvb_A 83 APEKMAAFAEEHGIFFPYLLDETQEVAKAYRA 114 (188)
T ss_dssp SHHHHHHHHHHHTCCSCEEECSSSHHHHHTTC
T ss_pred CHHHHHHHHHHhCCCceEEECCcchHHHHcCC
Confidence 77899999999999999999999999888875
No 65
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.83 E-value=1.9e-20 Score=155.48 Aligned_cols=91 Identities=8% Similarity=0.129 Sum_probs=80.1
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC--------
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~-------- 139 (252)
..++|+.+|+|++.|.+|+.++++++ +++++|++||++|||+|+.+++.|+++++++++.|++||+|+.+
T Consensus 22 ~~~~g~~~p~f~l~~~~G~~~~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~ 99 (181)
T 2p31_A 22 SMQQEQDFYDFKAVNIRGKLVSLEKY--RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPD 99 (181)
T ss_dssp -----CCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCS
T ss_pred cCCcCCccCceEeecCCCCEecHHHc--CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCC
Confidence 46889999999999999999999998 56788889999999999999999999999999999999999975
Q ss_pred CHHHHHHHHHH-hCCCceeeec
Q 025474 140 SVEQARTFSEQ-TKFKGEVYAD 160 (252)
Q Consensus 140 ~~~~~~~f~e~-~~~~fpll~D 160 (252)
+.+.+++|+++ ++++||++.|
T Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~ 121 (181)
T 2p31_A 100 SNKEIESFARRTYSVSFPMFSK 121 (181)
T ss_dssp CHHHHHHHHHHHHCCCSCBBCC
T ss_pred CHHHHHHHHHhhcCCCceeEee
Confidence 57889999999 9999999964
No 66
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.83 E-value=1e-19 Score=144.99 Aligned_cols=132 Identities=12% Similarity=0.163 Sum_probs=112.3
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe--CCCHHHHHHH
Q 025474 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG--PGSVEQARTF 147 (252)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs--~~~~~~~~~f 147 (252)
.+|+.+|+|++.|.+|+.++++++ +++++|++|++.||+.|+.+++.|.++++++.+.|+.+++|+ .++.+.+++|
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~ 80 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADL--QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQY 80 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHH--TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHh--CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHH
Confidence 569999999999999999999998 455667777799999999999999999999999999999999 5677899999
Q ss_pred HHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCe
Q 025474 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~ 227 (252)
.++++++|+++.|++..+.+.||+.. .|..||+|++ |+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~i~~-----------------------------------------~P~~~lid~~-G~ 118 (153)
T 2l5o_A 81 VKDYGLPFTVMYDADKAVGQAFGTQV-----------------------------------------YPTSVLIGKK-GE 118 (153)
T ss_dssp HHHTTCCSEEEECSSCHHHHHHTCCS-----------------------------------------SSEEEEECSS-SC
T ss_pred HHHcCCCceEEcCchHHHHHHcCCCc-----------------------------------------cCeEEEECCC-Cc
Confidence 99999999999999988888777531 3468999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHh
Q 025474 228 ISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 228 I~~~h~~~~~~D~p~~~eIL~al 250 (252)
|++.+.+. .+.+++++.+
T Consensus 119 i~~~~~g~-----~~~~~l~~~l 136 (153)
T 2l5o_A 119 ILKTYVGE-----PDFGKLYQEI 136 (153)
T ss_dssp CCEEEESS-----CCHHHHHHHH
T ss_pred EEEEEcCC-----CCHHHHHHHH
Confidence 99888763 5666776655
No 67
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.83 E-value=1.4e-19 Score=145.99 Aligned_cols=131 Identities=12% Similarity=0.135 Sum_probs=107.3
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH-HHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTF 147 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~-~~~~~f 147 (252)
...|+.+|+|++.|.+|+.++++++ +++++|++|+++||+.|+.+++.|.++++++.+.|+.+|+|+.++. +..++|
T Consensus 9 ~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~ 86 (152)
T 2lrt_A 9 KIKEASIIDIQLKDLKGNTRSLTDL--KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTS 86 (152)
T ss_dssp SSCTTCSCCCCEEBTTSCEECTTTG--GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHH
T ss_pred hccCCCCCCeEEEcCCCCEEeHHHh--CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 4678999999999999999999998 4566777778999999999999999999999999999999999876 456777
Q ss_pred HHHhCCCceeeecCChH---HHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCC
Q 025474 148 SEQTKFKGEVYADPNHS---SYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 224 (252)
Q Consensus 148 ~e~~~~~fpll~Dp~~~---ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~g 224 (252)
.+ +++|+++.|++.. +.+.||+.. .|.+||+|++
T Consensus 87 ~~--~~~~~~~~d~~~~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~ 123 (152)
T 2lrt_A 87 AD--NLPWVCVRDANGAYSSYISLYNVTN-----------------------------------------LPSVFLVNRN 123 (152)
T ss_dssp HT--TCSSEEEECSSGGGCHHHHHHTCCS-----------------------------------------CSEEEEEETT
T ss_pred Hh--CCCceEEECCCCcchHHHHHcCccc-----------------------------------------CceEEEECCC
Confidence 64 4899999999886 666666421 3479999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025474 225 KSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 225 gg~I~~~h~~~~~~D~p~~~eIL~al 250 (252)
|+|++.+.+ ..++++.+..+
T Consensus 124 -G~i~~~~~g-----~~~~e~~~~~~ 143 (152)
T 2lrt_A 124 -NELSARGEN-----IKDLDEAIKKL 143 (152)
T ss_dssp -TEEEEETTT-----CSCHHHHHHHH
T ss_pred -CeEEEecCC-----HHHHHHHHHHH
Confidence 699988765 35566666544
No 68
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.83 E-value=8e-20 Score=150.76 Aligned_cols=143 Identities=13% Similarity=0.146 Sum_probs=113.5
Q ss_pred cccCCCC-CcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCH-hHHHHHHHHHHcHHHHHh--CCCEEEEEeCC---CHH
Q 025474 70 DTKNLLD-TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDA--SGVALVLIGPG---SVE 142 (252)
Q Consensus 70 ~~g~~ap-~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp-~C~~el~~L~~~~~~l~~--~Gv~vV~Vs~~---~~~ 142 (252)
.+|+.+| +|++.|.+|+.++++++ .++++|++||++||| .|..+++.|+++++++++ .++++|+|+.+ +++
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~--~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~ 79 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNL--KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLE 79 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGG--TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHH
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHh--CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHH
Confidence 5799999 99999999999999998 467788899999998 799999999999999975 56999999976 678
Q ss_pred HHHHHHHHhCCCcee----e-ec--CChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCcccc
Q 025474 143 QARTFSEQTKFKGEV----Y-AD--PNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 215 (252)
Q Consensus 143 ~~~~f~e~~~~~fpl----l-~D--p~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~ 215 (252)
.+++|.++++.+++. + .| ...++.++||+..... + .. ....
T Consensus 80 ~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~-----------------~------~~---------~~~~ 127 (170)
T 3me7_A 80 DIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTA-----------------G------ND---------FIHP 127 (170)
T ss_dssp HHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEE-----------------T------TE---------EECC
T ss_pred HHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecC-----------------C------Cc---------cccC
Confidence 999999999988762 2 23 3467788888753210 0 00 0125
Q ss_pred ceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 216 GGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 216 GG~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+.+||||++ |+|++.|.+. .++.++|+++|.
T Consensus 128 ~~~~lID~~-G~i~~~~~g~----~~~~~~i~~~l~ 158 (170)
T 3me7_A 128 NVVVVLSPE-LQIKDYIYGV----NYNYLEFVNALR 158 (170)
T ss_dssp CEEEEECTT-SBEEEEEESS----SCCHHHHHHHHH
T ss_pred ceEEEECCC-CeEEEEEeCC----CCCHHHHHHHHH
Confidence 679999998 6999998664 456889988774
No 69
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.83 E-value=8e-20 Score=152.20 Aligned_cols=138 Identities=7% Similarity=-0.017 Sum_probs=106.5
Q ss_pred CCCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC------
Q 025474 66 SVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------ 139 (252)
Q Consensus 66 ~~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~------ 139 (252)
..+.++|+.+|+|++.|.+|+.++++++ +++++|++||++|||+|+.+++.|+++++++++.|++||+|+.+
T Consensus 20 ~~~~~~g~~~p~f~l~~~~G~~v~l~~~--~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~ 97 (185)
T 2gs3_A 20 FQSMRCARSMHEFSAKDIDGHMVNLDKY--RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQE 97 (185)
T ss_dssp SGGGGGCCCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCC
T ss_pred hhhccCCCCcCCceeEcCCCCEeeHHHc--CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCC
Confidence 3456789999999999999999999998 55788889999999999999999999999999999999999875
Q ss_pred --CHHHHHHHHHHhCCCceeee--cCChH----HHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCC
Q 025474 140 --SVEQARTFSEQTKFKGEVYA--DPNHS----SYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRG 211 (252)
Q Consensus 140 --~~~~~~~f~e~~~~~fpll~--Dp~~~----ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~ 211 (252)
+.+.+++|+++++++||++. |.+.. +|+.++..... .+..+. .
T Consensus 98 ~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~-------------------------~g~~~~----~ 148 (185)
T 2gs3_A 98 PGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKG-------------------------KGILGN----A 148 (185)
T ss_dssp CSCHHHHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGG-------------------------CCSSSS----S
T ss_pred CCCHHHHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhccc-------------------------ccccCC----c
Confidence 46789999999999999997 44432 33322211100 000110 0
Q ss_pred ccccceEEEEeCCCCeEEEEEeCC
Q 025474 212 GWQQGGIIVAGPGKSNISYIHRDK 235 (252)
Q Consensus 212 ~~q~GG~fVid~ggg~I~~~h~~~ 235 (252)
....|.+||||++ |+|++.+.+.
T Consensus 149 i~~~P~~~lid~~-G~i~~~~~g~ 171 (185)
T 2gs3_A 149 IKWNFTKFLIDKN-GCVVKRYGPM 171 (185)
T ss_dssp CCSSCCEEEECTT-SCEEEEECTT
T ss_pred ccccceEEEECCC-CCEEEeeCCC
Confidence 1125789999998 6999998763
No 70
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.83 E-value=3.9e-20 Score=153.25 Aligned_cols=92 Identities=11% Similarity=0.151 Sum_probs=84.2
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC--------CC
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GS 140 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~--------~~ 140 (252)
...|+.+|+|++.|.+|+.++++++ +++++|++||++|||+|+.+++.|+++++++++.|+.||+|+. ++
T Consensus 12 ~~~~~~~p~f~l~d~~G~~v~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~ 89 (180)
T 3kij_A 12 KPKINSFYAFEVKDAKGRTVSLEKY--KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRP 89 (180)
T ss_dssp CCCCCCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSC
T ss_pred cCCcCcccceEEecCCCCEecHHHc--CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCC
Confidence 4669999999999999999999998 5678999999999999999999999999999999999999995 47
Q ss_pred HHHHHHHHHH-hCCCceeeecCC
Q 025474 141 VEQARTFSEQ-TKFKGEVYADPN 162 (252)
Q Consensus 141 ~~~~~~f~e~-~~~~fpll~Dp~ 162 (252)
.+.+++|+++ ++++|+++.|.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~d 112 (180)
T 3kij_A 90 SKEVESFARKNYGVTFPIFHKIK 112 (180)
T ss_dssp HHHHHHHHHHHHCCCSCBBCCCC
T ss_pred HHHHHHHHHHhcCCCCceeeeee
Confidence 7899999999 999999987543
No 71
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.83 E-value=1.2e-19 Score=146.84 Aligned_cols=94 Identities=14% Similarity=0.210 Sum_probs=82.7
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC--------C
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~--------~ 140 (252)
.++|+.+|+|++.|.+|+.++++++ +++++|++||++|||+|+.+++.|+++++++.+.|+++|+|+.+ +
T Consensus 5 ~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 82 (169)
T 2v1m_A 5 HKSWNSIYEFTVKDINGVDVSLEKY--RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWA 82 (169)
T ss_dssp --CCCSGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred ccCCcccccceeecCCCCCccHHHc--CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCC
Confidence 5789999999999999999999998 55778888889999999999999999999999999999999975 4
Q ss_pred HHHHHHH-HHHhCCCceeee--cCChH
Q 025474 141 VEQARTF-SEQTKFKGEVYA--DPNHS 164 (252)
Q Consensus 141 ~~~~~~f-~e~~~~~fpll~--Dp~~~ 164 (252)
.+.+++| .++++++||++. |++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 83 EAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp HHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred HHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 6789999 599999999996 65543
No 72
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.83 E-value=3.4e-19 Score=143.45 Aligned_cols=138 Identities=13% Similarity=0.093 Sum_probs=111.3
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC-HHHHHHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTF 147 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~-~~~~~~f 147 (252)
..+|+.+|+|++.|.+|+.++++++ +++.+|++|++.||+.|+.+++.|.++++++.+.|+.+|+|+.++ .+.+++|
T Consensus 8 ~~~g~~~p~~~l~~~~g~~~~l~~~--~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~ 85 (165)
T 3or5_A 8 DARPTPAPSFSGVTVDGKPFSSASL--KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNY 85 (165)
T ss_dssp CCCCCBCCCCEEECTTSCEEEGGGG--TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHH
T ss_pred hcCCCCCCCceeeCCCCCEechhHc--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHH
Confidence 5789999999999999999999998 445666777799999999999999999999999999999999886 6789999
Q ss_pred HHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCe
Q 025474 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 227 (252)
Q Consensus 148 ~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~ 227 (252)
.++++++|+++.|++ .+.+.|+..... +....|..||+|++ |+
T Consensus 86 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------------------------------~i~~~P~~~lid~~-G~ 128 (165)
T 3or5_A 86 MKTQGIIYPVMMATP-ELIRAFNGYIDG-----------------------------------GITGIPTSFVIDAS-GN 128 (165)
T ss_dssp HHHHTCCSCEEECCH-HHHHHHHTTSTT-----------------------------------CSCSSSEEEEECTT-SB
T ss_pred HHHcCCCCceEecCH-HHHHHHhhhhcc-----------------------------------CCCCCCeEEEECCC-Cc
Confidence 999999999999976 666666532210 01236789999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHh
Q 025474 228 ISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 228 I~~~h~~~~~~D~p~~~eIL~al 250 (252)
|++.+.+.. +.+++.+.+
T Consensus 129 i~~~~~g~~-----~~~~l~~~l 146 (165)
T 3or5_A 129 VSGVIVGPR-----SKADFDRIV 146 (165)
T ss_dssp EEEEECSCC-----CHHHHHHHH
T ss_pred EEEEEcCCC-----CHHHHHHHH
Confidence 998887643 344554443
No 73
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.82 E-value=2.6e-19 Score=140.39 Aligned_cols=133 Identities=12% Similarity=0.143 Sum_probs=109.6
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC----CHHH
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQ 143 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~----~~~~ 143 (252)
...+|+.+|+|++.|.+|+.+++++ +++ .+|++|++.||+.|+.+++.|.++++++.+.++.++.|+.+ +.+.
T Consensus 8 ~~~~g~~~p~~~l~~~~g~~~~l~~--~gk-~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~ 84 (145)
T 3erw_A 8 EEKQPAVPAVFLMKTIEGEDISIPN--KGQ-KTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQV 84 (145)
T ss_dssp ----CCSCCEEEEECTTSCEEEESC--TTS-EEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHH
T ss_pred cccCCCcCCCceeecCCCCEEeHHH--CCC-EEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHH
Confidence 3578999999999999999999999 444 45555569999999999999999999998889999999985 6789
Q ss_pred HHHHHHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeC
Q 025474 144 ARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 144 ~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ 223 (252)
+++|.++++++|+++.|++..+.+.||+.. .|..||+|+
T Consensus 85 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~ 123 (145)
T 3erw_A 85 VEDFIKANKLTFPIVLDSKGELMKEYHIIT-----------------------------------------IPTSFLLNE 123 (145)
T ss_dssp HHHHHHHTTCCSCEEECSSSHHHHHTTCCE-----------------------------------------ESEEEEECT
T ss_pred HHHHHHHcCCceeEEEcCchhHHHhcCcCc-----------------------------------------cCeEEEEcC
Confidence 999999999999999999999888887531 346899999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025474 224 GKSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 224 ggg~I~~~h~~~~~~D~p~~~eIL~al 250 (252)
+ |+|++.+.+. .+.+++.+.+
T Consensus 124 ~-G~i~~~~~g~-----~~~~~l~~~l 144 (145)
T 3erw_A 124 K-GEIEKTKIGP-----MTAEQLKEWT 144 (145)
T ss_dssp T-CCEEEEEESC-----CCHHHHHHHH
T ss_pred C-CcEEEEEcCC-----cCHHHHHHhh
Confidence 8 6999988763 4556666654
No 74
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.82 E-value=3.7e-19 Score=147.20 Aligned_cols=121 Identities=13% Similarity=0.032 Sum_probs=104.1
Q ss_pred CCccccCCCCCcEEecCCC--CeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC-CCHHH
Q 025474 67 VSEDTKNLLDTVKVYDVNG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-GSVEQ 143 (252)
Q Consensus 67 ~~~~~g~~ap~f~l~d~~G--~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~-~~~~~ 143 (252)
....+|+.+|+|++.|.+| +.++++++ .++++|++||++||++|+.+++.|++++++ |+.+|+|+. ++.+.
T Consensus 28 ~~~~~G~~~P~f~l~~~~g~~~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~~ 101 (176)
T 3kh7_A 28 PSALIGKPFPAFDLPSVQDPARRLTEADL--KGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNAA 101 (176)
T ss_dssp TTTTTTSBCCCCEEEBSSCTTSEEEGGGG--CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHHH
T ss_pred cccccCCcCCCcEecccCCCCceecHHHh--CCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHHH
Confidence 3468899999999999999 89999998 456677777799999999999999987765 899999995 67789
Q ss_pred HHHHHHHhCCCce-eeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEe
Q 025474 144 ARTFSEQTKFKGE-VYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 222 (252)
Q Consensus 144 ~~~f~e~~~~~fp-ll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid 222 (252)
.++|.++++++|+ ++.|++..+.++||+.. .|.+||+|
T Consensus 102 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid 140 (176)
T 3kh7_A 102 AIKWLNELHNPYLLSISDADGTLGLDLGVYG-----------------------------------------APETYLID 140 (176)
T ss_dssp HHHHHHHTTCCCSEEEEETTCHHHHHHTCCS-----------------------------------------SCEEEEEC
T ss_pred HHHHHHHcCCCCceEEECCcchHHHHcCCCC-----------------------------------------CCeEEEEC
Confidence 9999999999998 69999999888887531 34799999
Q ss_pred CCCCeEEEEEeCC
Q 025474 223 PGKSNISYIHRDK 235 (252)
Q Consensus 223 ~ggg~I~~~h~~~ 235 (252)
++ |+|++.+.+.
T Consensus 141 ~~-G~i~~~~~g~ 152 (176)
T 3kh7_A 141 KQ-GIIRHKIVGV 152 (176)
T ss_dssp TT-CBEEEEEESC
T ss_pred CC-CeEEEEEcCC
Confidence 98 6999999875
No 75
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.82 E-value=8.6e-20 Score=143.93 Aligned_cols=122 Identities=10% Similarity=0.006 Sum_probs=105.2
Q ss_pred CccccCCCCCcEEecCCCCeEeCC--CccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHH-HhCCCEEEEEeCCC-HHH
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPIS--DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVM-DASGVALVLIGPGS-VEQ 143 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls--~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l-~~~Gv~vV~Vs~~~-~~~ 143 (252)
.+.+|+.+|+|++.|.+|+.++++ ++ +++.+|++|++.||+.|+.+++.|.++++++ .+.|+.+++|+.+. .+.
T Consensus 4 ~~~~g~~~p~~~l~~~~g~~~~l~~~~~--~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~ 81 (148)
T 3fkf_A 4 KVTVGKSAPYFSLPNEKGEKLSRSAERF--RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREA 81 (148)
T ss_dssp -CCTTSBCCCCCEEBTTSCEECTTSTTT--TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHH
T ss_pred cccCCCcCCCeEeeCCCCCEEecccccc--CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHH
Confidence 468899999999999999999999 87 4567777777999999999999999999999 88899999999885 468
Q ss_pred HHHHHHHhCCCceeeecC---ChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEE
Q 025474 144 ARTFSEQTKFKGEVYADP---NHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 220 (252)
Q Consensus 144 ~~~f~e~~~~~fpll~Dp---~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fV 220 (252)
.++|.++++++|+++.|+ +..+.+.||+. ..|..||
T Consensus 82 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~l 120 (148)
T 3fkf_A 82 WETAIKKDTLSWDQVCDFTGLSSETAKQYAIL-----------------------------------------TLPTNIL 120 (148)
T ss_dssp HHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC-----------------------------------------SSSEEEE
T ss_pred HHHHHHHcCCCceEEEccCCcchHHHHhcCCC-----------------------------------------CcCEEEE
Confidence 999999999999999998 56777766643 1357899
Q ss_pred EeCCCCeEEEEEe
Q 025474 221 AGPGKSNISYIHR 233 (252)
Q Consensus 221 id~ggg~I~~~h~ 233 (252)
+|++ |+|++.+.
T Consensus 121 id~~-G~i~~~~~ 132 (148)
T 3fkf_A 121 LSPT-GKILARDI 132 (148)
T ss_dssp ECTT-SBEEEESC
T ss_pred ECCC-CeEEEecC
Confidence 9998 69998876
No 76
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.82 E-value=1.9e-19 Score=145.82 Aligned_cols=94 Identities=13% Similarity=0.159 Sum_probs=81.4
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC--------C
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~--------~ 140 (252)
.++|+.+|+|++.|.+|+.++++++ +++++|++||++||+.|+.+++.|+++++++++.|++||+|+.+ +
T Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~--~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~ 83 (170)
T 2p5q_A 6 SKNPESVHDFTVKDAKENDVDLSIF--KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGT 83 (170)
T ss_dssp ----CCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred CCCCccccceEEEcCCCCEecHHHh--CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCC
Confidence 4689999999999999999999998 55778888889999999999999999999999999999999974 5
Q ss_pred HHHHHHHHH-HhCCCceee--ecCChH
Q 025474 141 VEQARTFSE-QTKFKGEVY--ADPNHS 164 (252)
Q Consensus 141 ~~~~~~f~e-~~~~~fpll--~Dp~~~ 164 (252)
.+.+++|.+ +++++|+++ .|++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 84 NDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp HHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred HHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 788999999 789999999 676653
No 77
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.81 E-value=6.3e-20 Score=148.96 Aligned_cols=149 Identities=9% Similarity=0.044 Sum_probs=118.4
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHh-HHHHHHHHHHcHHHHHhC---CCEEEEEeCC----C
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDAS---GVALVLIGPG----S 140 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~-C~~el~~L~~~~~~l~~~---Gv~vV~Vs~~----~ 140 (252)
..+|+.+|+|++.|.+| .++++++ +++++|++||++||+. |+.+++.|.++++++.+. ++++|+|+.+ +
T Consensus 10 ~~~G~~~p~f~l~~~~g-~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~ 86 (172)
T 2k6v_A 10 RLLNPKPVDFALEGPQG-PVRLSQF--QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDP 86 (172)
T ss_dssp EEEEEEECCCEEECSSS-EEEGGGS--TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCC
T ss_pred cccCCCCCCeEEEcCCC-CCcHHHh--CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCC
Confidence 45789999999999999 9999998 5678888999999996 999999999999999876 7999999965 5
Q ss_pred HHHHHHHHHHhCCCceeeecCC---hHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccce
Q 025474 141 VEQARTFSEQTKFKGEVYADPN---HSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 141 ~~~~~~f~e~~~~~fpll~Dp~---~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG 217 (252)
++.+++|.++++.+|++++|++ .++.++||+.......- . ...+ ++ ...|.
T Consensus 87 ~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~---~--------~~~~------~i---------~~~P~ 140 (172)
T 2k6v_A 87 PEVADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYR---G--------PGEY------LV---------DHTAT 140 (172)
T ss_dssp HHHHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEE---E--------TTEE------EE---------EECCC
T ss_pred HHHHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCC---C--------CCCc------eE---------ecCCE
Confidence 6899999999999999999998 68889999864321000 0 0000 00 13678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 218 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+||+| + |+|++.|.+.. .++.++|++.++
T Consensus 141 ~~lid-~-G~i~~~~~g~~---~~~~~~l~~~l~ 169 (172)
T 2k6v_A 141 TFVVK-E-GRLVLLYSPDK---AEATDRVVADLQ 169 (172)
T ss_dssp EEEEE-T-TEEEEEECHHH---HTCHHHHHHHHH
T ss_pred EEEEE-C-CEEEEEECCCC---CCCHHHHHHHHH
Confidence 99999 8 69999987643 457778887764
No 78
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.81 E-value=2.2e-19 Score=143.40 Aligned_cols=131 Identities=14% Similarity=0.150 Sum_probs=109.2
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC---CCHHHH
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP---GSVEQA 144 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~---~~~~~~ 144 (252)
++.+|+.+|+|++.|.+|+.++++++ + +.+|++|+++||+.|+.+++.|.++++++ ++.+++|+. ++.+.+
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~~~-~--k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~ 77 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPATV-S--KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVV 77 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTTTS-C--SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHH
T ss_pred cCCCCCcCCceEEECCCCCEechHHc-C--CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHH
Confidence 46889999999999999999999998 3 55666667999999999999999999998 899999999 778999
Q ss_pred HHHHHHhCCCceeeec---CChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEE
Q 025474 145 RTFSEQTKFKGEVYAD---PNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 145 ~~f~e~~~~~fpll~D---p~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVi 221 (252)
++|.++++++|+++.| .+..+++.||+. ..|..||+
T Consensus 78 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~li 116 (154)
T 3ia1_A 78 LEYMKTYPRFIPLLASDRDRPHEVAARFKVL-----------------------------------------GQPWTFVV 116 (154)
T ss_dssp HHHHTTCTTEEECBCCSSCCHHHHHTTSSBC-----------------------------------------SSCEEEEE
T ss_pred HHHHHHcCCCcccccccccchHHHHHHhCCC-----------------------------------------cccEEEEE
Confidence 9999999999999998 556666655542 14579999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 222 GPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 222 d~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
|++ |+|++.+.+. .+.+++.+.+.
T Consensus 117 d~~-G~i~~~~~g~-----~~~~~l~~~l~ 140 (154)
T 3ia1_A 117 DRE-GKVVALFAGR-----AGREALLDALL 140 (154)
T ss_dssp CTT-SEEEEEEESB-----CCHHHHHHHHH
T ss_pred CCC-CCEEEEEcCC-----CCHHHHHHHHH
Confidence 998 6999998763 45666666653
No 79
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.81 E-value=2.9e-19 Score=154.24 Aligned_cols=90 Identities=11% Similarity=0.083 Sum_probs=80.9
Q ss_pred cccCCCCCcEEecCC-CCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC--------CC
Q 025474 70 DTKNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GS 140 (252)
Q Consensus 70 ~~g~~ap~f~l~d~~-G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~--------~~ 140 (252)
.....+|+|++.|.+ |+.++|+++ ++++||++||++||++|+ |+++|+++++++++.|++||+|++ ++
T Consensus 30 ~~~~~~pdF~l~d~~~G~~v~Lsd~--~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~ 106 (215)
T 2i3y_A 30 DEKGTIYDYEAIALNKNEYVSFKQY--VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGD 106 (215)
T ss_dssp CCCCCGGGCEEEBSSSSCEEEGGGG--TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred cccCCcCCcEeeeCCCCCEEcHHHh--CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCC
Confidence 346679999999999 999999999 567889999999999999 999999999999999999999985 35
Q ss_pred HHHHHHHHH------HhCCCceeeecCC
Q 025474 141 VEQARTFSE------QTKFKGEVYADPN 162 (252)
Q Consensus 141 ~~~~~~f~e------~~~~~fpll~Dp~ 162 (252)
.+.+++|++ +++++||+++|.+
T Consensus 107 ~~~i~~f~~~~~~~~~~~~~fpll~d~d 134 (215)
T 2i3y_A 107 NKEILPGLKYVRPGGGFVPSFQLFEKGD 134 (215)
T ss_dssp HHHHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHHHhccchhccCccceeEeeec
Confidence 678999999 8999999998754
No 80
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.81 E-value=1.5e-19 Score=151.11 Aligned_cols=95 Identities=9% Similarity=0.122 Sum_probs=83.2
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC--------
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~-------- 139 (252)
..+.++.+|+|++.|.+|+.++++++ +++++|++||++|||+|+.+++.|+++++++.+.|++||+|+.+
T Consensus 21 ~~~~~~~~p~f~l~~~~G~~~~l~~~--~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 98 (190)
T 2vup_A 21 HMSAASSIFDFEVLDADHKPYNLVQH--KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPG 98 (190)
T ss_dssp ---CCCSGGGSCCBBTTSSBCCGGGG--TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCS
T ss_pred cCCCCCcccCeEEEcCCCCEEEHHHc--CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCC
Confidence 46789999999999999999999998 45677778899999999999999999999999999999999987
Q ss_pred CHHHHHHHH-HHhCCCceeee--cCChH
Q 025474 140 SVEQARTFS-EQTKFKGEVYA--DPNHS 164 (252)
Q Consensus 140 ~~~~~~~f~-e~~~~~fpll~--Dp~~~ 164 (252)
+.+.+++|. ++++++|+++. |++..
T Consensus 99 ~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 99 NEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp CHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 678999999 89999999997 54433
No 81
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.81 E-value=5.1e-19 Score=142.50 Aligned_cols=144 Identities=11% Similarity=0.051 Sum_probs=110.8
Q ss_pred CCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHh-HHHHHHHHHHcHHHHHh----CCCEEEEEeCCC----HHHH
Q 025474 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDA----SGVALVLIGPGS----VEQA 144 (252)
Q Consensus 74 ~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~-C~~el~~L~~~~~~l~~----~Gv~vV~Vs~~~----~~~~ 144 (252)
.+|+|++.|.+|+.++++++ +++++|++||++||+. |+.+++.|+++++++++ .++++|+|+.++ ++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~ 79 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDY--LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAI 79 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGG--TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHH
T ss_pred CCCCeEEEeCCCCEEeHHHc--CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHH
Confidence 57999999999999999998 4577888889999997 99999999999999987 499999999875 6889
Q ss_pred HHHHHHhCCCceeee---cCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEE
Q 025474 145 RTFSEQTKFKGEVYA---DPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 145 ~~f~e~~~~~fpll~---Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVi 221 (252)
++|.++++++|+++. |+...+.++||+...... . .....+. ....+.+||+
T Consensus 80 ~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~----~---------------~~~~~~~-------~~~~~~~~li 133 (164)
T 2ggt_A 80 ANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGP----K---------------DEDEDYI-------VDHTIIMYLI 133 (164)
T ss_dssp HHHHHTTCSSCEEEECCHHHHHHHHHTTTCCEEEEE----E---------------CTTSCEE-------EEECCEEEEE
T ss_pred HHHHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEecC----C---------------CCCCCee-------EeccceEEEE
Confidence 999999999999884 667788899988643210 0 0000000 0124479999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 222 GPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 222 d~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
|++ |+|++.+.+. .+.++|++.+.
T Consensus 134 d~~-G~i~~~~~g~-----~~~~~l~~~l~ 157 (164)
T 2ggt_A 134 GPD-GEFLDYFGQN-----KRKGEIAASIA 157 (164)
T ss_dssp CTT-SCEEEEEETT-----CCHHHHHHHHH
T ss_pred CCC-CeEEEEeCCC-----CCHHHHHHHHH
Confidence 998 6999988653 34566666553
No 82
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=2.7e-21 Score=155.94 Aligned_cols=139 Identities=14% Similarity=0.179 Sum_probs=114.5
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHH-cHHHHH-hCCCEEEEEeCCCH-HHH
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA-KKDVMD-ASGVALVLIGPGSV-EQA 144 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~-~~~~l~-~~Gv~vV~Vs~~~~-~~~ 144 (252)
.+.+|+.+|+|++.|.+|+.++++++ +++++|++|+++||+.|+.+++.|.+ ++++++ +.++.+|+|+.++. +.+
T Consensus 6 ~l~~g~~~p~f~l~~~~g~~~~l~~~--~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~ 83 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLTDGKQVTLSSL--RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKV 83 (159)
Confidence 35789999999999999999999998 45667777889999999999999998 888888 78999999999875 578
Q ss_pred HHHHHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCC
Q 025474 145 RTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 224 (252)
Q Consensus 145 ~~f~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~g 224 (252)
++|.++++++|+++.|++..+.++||+... ..|..||+|++
T Consensus 84 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---------------------------------------~~P~~~lid~~ 124 (159)
T 2ls5_A 84 LAFAKSTGVTYPLGLDPGADIFAKYALRDA---------------------------------------GITRNVLIDRE 124 (159)
Confidence 899999999999999999988888775210 03468999988
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 225 KSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 225 gg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
|+|++.+.+. +..+++++|+.+.
T Consensus 125 -G~i~~~~~g~---~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 125 -GKIVKLTRLY---NEEEFASLVQQIN 147 (159)
Confidence 6999988763 3335666666553
No 83
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.80 E-value=5.1e-19 Score=141.54 Aligned_cols=119 Identities=12% Similarity=0.094 Sum_probs=95.8
Q ss_pred CCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 74 ~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
++|+|.+. .+|+.++++++ +++++|++|+++||++|+.+++.|.++++++++.++.+|+|+.++.+.+++|.+++++
T Consensus 4 pa~~~~~~-~~G~~~~l~~~--~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~ 80 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQSL--KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPV 80 (151)
T ss_dssp ---CEEET-TTCCEECGGGC--CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCC
T ss_pred Ccchhhcc-cCCCEecHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCC
Confidence 44555544 79999999998 5677888888999999999999999999999889999999999999999999999999
Q ss_pred CceeeecCC---hHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCeEEE
Q 025474 154 KGEVYADPN---HSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISY 230 (252)
Q Consensus 154 ~fpll~Dp~---~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~I~~ 230 (252)
+|+++.|.+ ..+++.||.. + ...|.+||+|++ |+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~------------------------------v---------~~~P~~~lid~~-G~i~~ 120 (151)
T 3raz_A 81 SYPIWRYTGANSRNFMKTYGNT------------------------------V---------GVLPFTVVEAPK-CGYRQ 120 (151)
T ss_dssp SSCEEEECCSCHHHHHHTTTCC------------------------------S---------CCSSEEEEEETT-TTEEE
T ss_pred CCceEecCccchHHHHHHhCCc------------------------------c---------CCCCEEEEECCC-CcEEE
Confidence 999998864 3344444420 0 125689999998 69998
Q ss_pred EEeCC
Q 025474 231 IHRDK 235 (252)
Q Consensus 231 ~h~~~ 235 (252)
.+.+.
T Consensus 121 ~~~g~ 125 (151)
T 3raz_A 121 TITGE 125 (151)
T ss_dssp ECCSC
T ss_pred EECCC
Confidence 88764
No 84
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.80 E-value=6.4e-19 Score=150.64 Aligned_cols=91 Identities=5% Similarity=-0.018 Sum_probs=81.6
Q ss_pred cccCCCCCcEEecCC-CCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC--------C
Q 025474 70 DTKNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (252)
Q Consensus 70 ~~g~~ap~f~l~d~~-G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~--------~ 140 (252)
..++.+|+|++.|.+ |+.++|+++ ++++||++||++|||+|+++++.|+++++++++.|++||+|+.+ +
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~--~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~ 98 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSL--RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAK 98 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSC
T ss_pred hhcCccCceEeeeCCCCCCccHHHc--CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCC
Confidence 457789999999999 999999998 56788999999999999999999999999999999999999975 4
Q ss_pred HHHHHHHHH------HhCCCceeeecCC
Q 025474 141 VEQARTFSE------QTKFKGEVYADPN 162 (252)
Q Consensus 141 ~~~~~~f~e------~~~~~fpll~Dp~ 162 (252)
.+.+++|++ +++++||+++|.+
T Consensus 99 ~~~i~~f~~~~~~~~~~~~~fp~l~d~d 126 (208)
T 2f8a_A 99 NEEILNSLKYVRPGGGFEPNFMLFEKCE 126 (208)
T ss_dssp HHHHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHHHhcccccccccceEEEEEee
Confidence 578999998 8899999997643
No 85
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.80 E-value=7.5e-19 Score=138.23 Aligned_cols=121 Identities=10% Similarity=0.153 Sum_probs=104.4
Q ss_pred cccCCCCCcEE--ecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC------CH
Q 025474 70 DTKNLLDTVKV--YDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SV 141 (252)
Q Consensus 70 ~~g~~ap~f~l--~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~------~~ 141 (252)
.+|+.+|+|++ .|.+|+.++++++ +++++|++|++.||+.|+.+++.|.++++++.+. +.+++|+.+ +.
T Consensus 2 ~~g~~~P~f~~~~~~~~g~~~~~~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~ 78 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWLNGEVTREQLI--GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDP 78 (148)
T ss_dssp CTTCBCCCCCCCSEEESCCCCHHHHT--TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSH
T ss_pred CCCCCCCCCccccccccCcccchhhc--CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCH
Confidence 57999999999 7899999999987 4455666677999999999999999999999777 999999976 57
Q ss_pred HHHHHHHHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEE
Q 025474 142 EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 142 ~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVi 221 (252)
+.+++|.++++++|+++.|++..+.+.||+.. .|..||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~li 117 (148)
T 2b5x_A 79 GKIKETAAEHDITQPIFVDSDHALTDAFENEY-----------------------------------------VPAYYVF 117 (148)
T ss_dssp HHHHHHHHHTTCCSCEEECSSCHHHHHTCCCC-----------------------------------------SSEEEEE
T ss_pred HHHHHHHHHcCCCcceEECCchhHHHHhCCCC-----------------------------------------CCEEEEE
Confidence 89999999999999999999998888887631 3468999
Q ss_pred eCCCCeEEEEEeCC
Q 025474 222 GPGKSNISYIHRDK 235 (252)
Q Consensus 222 d~ggg~I~~~h~~~ 235 (252)
|++ |+|++.+.+.
T Consensus 118 d~~-G~i~~~~~g~ 130 (148)
T 2b5x_A 118 DKT-GQLRHFQAGG 130 (148)
T ss_dssp CTT-CBEEEEEESC
T ss_pred CCC-CcEEEEecCC
Confidence 998 6999988774
No 86
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.80 E-value=2e-18 Score=134.09 Aligned_cols=130 Identities=12% Similarity=0.121 Sum_probs=107.1
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC-HHHHHHHHHHh
Q 025474 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQT 151 (252)
Q Consensus 73 ~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~-~~~~~~f~e~~ 151 (252)
..+|+|++.|.+|+.++++++ ++ +.+|++|++.||+.|+.+++.|.++++++. ++.+++|+.++ .+.+++|.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~-~~-k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASL-QG-KPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGG-TT-SCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHh-CC-CEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHc
Confidence 468999999999999999998 44 455556669999999999999999999886 99999999987 78999999999
Q ss_pred CCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCeEEEE
Q 025474 152 KFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYI 231 (252)
Q Consensus 152 ~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~I~~~ 231 (252)
+++|+++.|++..+.+.||+.. .|..|++|++ |+|. .
T Consensus 78 ~~~~~~~~d~~~~~~~~~~i~~-----------------------------------------~P~~~lid~~-G~i~-~ 114 (136)
T 1lu4_A 78 NLNFTNLNDADGVIWARYNVPW-----------------------------------------QPAFVFYRAD-GTST-F 114 (136)
T ss_dssp TCCSEEEECTTSHHHHHTTCCS-----------------------------------------SSEEEEECTT-SCEE-E
T ss_pred CCCceEEECCchhHHHhcCCCC-----------------------------------------CCEEEEECCC-CcEE-E
Confidence 9999999999999888877521 3468999998 6888 6
Q ss_pred EeCCCCCCCCCHHHHHHHhh
Q 025474 232 HRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 232 h~~~~~~D~p~~~eIL~al~ 251 (252)
+.+ .....+.+++.+.++
T Consensus 115 ~~~--~~g~~~~~~l~~~l~ 132 (136)
T 1lu4_A 115 VNN--PTAAMSQDELSGRVA 132 (136)
T ss_dssp ECC--SSSCCCHHHHHHHHH
T ss_pred EEc--CCCccCHHHHHHHHH
Confidence 662 333456777777664
No 87
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.79 E-value=8.2e-19 Score=150.33 Aligned_cols=88 Identities=10% Similarity=0.021 Sum_probs=79.1
Q ss_pred cCCCCCcEEecCC-CCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC--------CCHH
Q 025474 72 KNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GSVE 142 (252)
Q Consensus 72 g~~ap~f~l~d~~-G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~--------~~~~ 142 (252)
.+.+|+|++.|.+ |+.++|+++ ++++||++||++|||+| .|+++|+++++++++.|++||+|+. ++.+
T Consensus 14 ~~~~pdF~l~d~~~G~~v~Ls~~--kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 14 SGTIYEYGALTIDGEEYIPFKQY--AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp -CCGGGCEEEBTTSSCEEEGGGG--TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cCccCCeEeeeCCCCCEEcHHHh--CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 4579999999999 999999998 56789999999999999 7999999999999999999999984 3567
Q ss_pred HHHHHHH------HhCCCceeeecCC
Q 025474 143 QARTFSE------QTKFKGEVYADPN 162 (252)
Q Consensus 143 ~~~~f~e------~~~~~fpll~Dp~ 162 (252)
.+++|++ +++++||++.|.+
T Consensus 91 ~i~~f~~~~~~~~~~~~~fp~l~d~d 116 (207)
T 2r37_A 91 EILPTLKYVRPGGGFVPNFQLFEKGD 116 (207)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHhcchhhccCccceeeeEec
Confidence 8999999 8999999998754
No 88
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.79 E-value=2.8e-19 Score=144.88 Aligned_cols=98 Identities=16% Similarity=0.194 Sum_probs=89.0
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC---------
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------- 139 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~--------- 139 (252)
..+|+.+|+|++.|.+|+.++++++ +++++|++|++.||++|+.+++.|.++++++. ++.+|+|+.+
T Consensus 11 ~~~g~~~p~~~l~~~~g~~~~l~~~--~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~ 86 (165)
T 3ha9_A 11 EEVLEREASFSLTTIDGEVISLNNV--GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALG 86 (165)
T ss_dssp HHHHHHHHCCCEEBTTSCEECGGGC--CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHT
T ss_pred ccccCcCCCCEeecCCCCEeeHHHh--CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccc
Confidence 5789999999999999999999998 45677777789999999999999999999887 9999999986
Q ss_pred ----------CHHHHHHHHHHhCC-CceeeecCChHHHHHcCC
Q 025474 140 ----------SVEQARTFSEQTKF-KGEVYADPNHSSYEALSF 171 (252)
Q Consensus 140 ----------~~~~~~~f~e~~~~-~fpll~Dp~~~ly~alGv 171 (252)
+.+.+++|.+++++ +|+++.| +..+.+.||+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v 128 (165)
T 3ha9_A 87 LNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNV 128 (165)
T ss_dssp CCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTC
T ss_pred cccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCC
Confidence 67899999999999 9999999 8888888865
No 89
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.79 E-value=4.6e-18 Score=137.98 Aligned_cols=138 Identities=13% Similarity=0.103 Sum_probs=109.8
Q ss_pred CCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHh-HHHHHHHHHHcHHHHHh----CCCEEEEEeCC----CHHHHHH
Q 025474 76 DTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDA----SGVALVLIGPG----SVEQART 146 (252)
Q Consensus 76 p~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~-C~~el~~L~~~~~~l~~----~Gv~vV~Vs~~----~~~~~~~ 146 (252)
|+|++.|.+|+.++++++ +++++|++||++||+. |+.+++.|+++++++++ .++++|+|+.+ +++.+++
T Consensus 7 p~f~l~~~~G~~~~l~~~--~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~ 84 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADF--RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMAR 84 (171)
T ss_dssp SCCEEEETTSCEEETTTT--TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHh--CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHH
Confidence 899999999999999998 5678888999999997 99999999999999986 58999999987 5789999
Q ss_pred HHHHhCCCceeeecCC---hHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCc---cccceEEE
Q 025474 147 FSEQTKFKGEVYADPN---HSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGG---WQQGGIIV 220 (252)
Q Consensus 147 f~e~~~~~fpll~Dp~---~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~---~q~GG~fV 220 (252)
|.++++++|+++.|+. ..+.++||+....... + .++. ...+.+||
T Consensus 85 ~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~---------------------------~--~~~~~~~~~~~~~~l 135 (171)
T 2rli_A 85 YVQDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPK---------------------------D--EDQDYIVDHSIAIYL 135 (171)
T ss_dssp HHHTTCTTCCEEECCHHHHHHHHHHSCCCCEECCC---------------------------C--SSCCCCEECCCEEEE
T ss_pred HHHHcCCCeEEEeCCHHHHHHHHHHhCeEEEecCC---------------------------C--CCCCeEEeccceEEE
Confidence 9999999999998754 4788889886432100 0 0011 13568999
Q ss_pred EeCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025474 221 AGPGKSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 221 id~ggg~I~~~h~~~~~~D~p~~~eIL~al 250 (252)
+|++ |+|++.|.+. .+.+++++.+
T Consensus 136 id~~-G~i~~~~~g~-----~~~~~l~~~l 159 (171)
T 2rli_A 136 LNPD-GLFTDYYGRS-----RSAEQISDSV 159 (171)
T ss_dssp ECTT-SCEEEEEESS-----CCHHHHHHHH
T ss_pred ECCC-CeEEEEECCC-----CCHHHHHHHH
Confidence 9998 6999998763 3456665554
No 90
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.79 E-value=5.9e-20 Score=153.43 Aligned_cols=91 Identities=9% Similarity=0.122 Sum_probs=81.3
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC--------
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~-------- 139 (252)
....+..+|+|++.|.+|+.++|+++ ++++||++||++|||+|..+++.|+++++++++.|++||+|+.+
T Consensus 19 ~~~~~~~~p~f~l~d~~G~~~~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~ 96 (187)
T 3dwv_A 19 KMSAASSIFDFEVLDADHKPYNLVQH--KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPG 96 (187)
T ss_dssp -CTTCCSGGGSCCBBTTSCBCCGGGG--TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSS
T ss_pred hhcCCCccCCeEEEcCCCCEeeHHHh--CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCC
Confidence 35678899999999999999999998 55778888899999999999999999999999999999999975
Q ss_pred CHHHHHHHHH-HhCCCceeeec
Q 025474 140 SVEQARTFSE-QTKFKGEVYAD 160 (252)
Q Consensus 140 ~~~~~~~f~e-~~~~~fpll~D 160 (252)
+.+.+++|++ +++++|+++.|
T Consensus 97 ~~~~~~~~~~~~~~~~~p~~~~ 118 (187)
T 3dwv_A 97 NEEEIKEFVCTKFKAEFPIMAK 118 (187)
T ss_dssp BTTHHHHSCCBCCCCSSCBBCC
T ss_pred CHHHHHHHHHhccCCCCceeec
Confidence 4678999998 45999999974
No 91
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.79 E-value=4e-18 Score=131.48 Aligned_cols=128 Identities=14% Similarity=0.143 Sum_probs=106.4
Q ss_pred CCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEE------eCCCHHHHHHH
Q 025474 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI------GPGSVEQARTF 147 (252)
Q Consensus 74 ~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~V------s~~~~~~~~~f 147 (252)
++|+|++.|.+|+.++++++ +++.+|++|++.||+.|+.+++.|.+++++ ...++.++.| ..++.+.+++|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~-~~~~~~~v~i~~~~~~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDY--KGKKVYLKFWASWCSICLASLPDTDEIAKE-AGDDYVVLTVVSPGHKGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGG--TTSEEEEEECCTTCHHHHHHHHHHHHHHHT-CTTTEEEEEEECTTSTTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHH-hCCCcEEEEEEcCCCCchhhHHHHHHH
Confidence 48999999999999999998 456677788899999999999999999888 4567899999 55677899999
Q ss_pred HHHhCC-CceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCC
Q 025474 148 SEQTKF-KGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 148 ~e~~~~-~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg 226 (252)
.+++++ +|+++.|++..+.+.||+.. .|..||+|++ |
T Consensus 78 ~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~-G 115 (138)
T 4evm_A 78 YKGLDYKNLPVLVDPSGKLLETYGVRS-----------------------------------------YPTQAFIDKE-G 115 (138)
T ss_dssp HTTCCCTTCCEEECTTCHHHHHTTCCS-----------------------------------------SSEEEEECTT-C
T ss_pred HhhcCCCCeeEEECcchHHHHHcCccc-----------------------------------------CCeEEEECCC-C
Confidence 999999 89999999999888887521 3468999998 6
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 227 NISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 227 ~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
+|++.+.+. .+.+++.+.++
T Consensus 116 ~i~~~~~g~-----~~~~~l~~~l~ 135 (138)
T 4evm_A 116 KLVKTHPGF-----MEKDAILQTLK 135 (138)
T ss_dssp CEEEEEESC-----CCHHHHHHHHH
T ss_pred cEEEeecCC-----CcHHHHHHHHH
Confidence 999998863 34566666553
No 92
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.79 E-value=1.1e-18 Score=138.91 Aligned_cols=136 Identities=14% Similarity=0.183 Sum_probs=110.6
Q ss_pred ccccCCCC-CcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH-HHHHH
Q 025474 69 EDTKNLLD-TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQART 146 (252)
Q Consensus 69 ~~~g~~ap-~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~-~~~~~ 146 (252)
+.+|+.+| +|++.|.+|+.++++++ .++.+|++|++.||+.|+.+++.|.++++++.+.++.+++|+.+.. +.+++
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 80 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLADL--KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWEN 80 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEESTTT--TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHH
T ss_pred cccCCCCCcccEeecCCCCEeeHHHc--CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHH
Confidence 56899999 99999999999999998 4566777778999999999999999999999888999999998865 68899
Q ss_pred HHHHhCCCc-eeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCC
Q 025474 147 FSEQTKFKG-EVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 225 (252)
Q Consensus 147 f~e~~~~~f-pll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~gg 225 (252)
|.+++++++ +++.|++..+.+.||+.. .|..||+|++
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~- 118 (152)
T 2lja_A 81 MVTKDQLKGIQLHMGTDRTFMDAYLING-----------------------------------------IPRFILLDRD- 118 (152)
T ss_dssp HHHHHTCCSEEEECSSCTHHHHHTTCCS-----------------------------------------SCCEEEECTT-
T ss_pred HHHhcCCCCceeecCcchhHHHHcCcCC-----------------------------------------CCEEEEECCC-
Confidence 999999996 588898888888777531 3468999988
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHh
Q 025474 226 SNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 226 g~I~~~h~~~~~~D~p~~~eIL~al 250 (252)
|+|++.+.+ ..+..+++++|+.+
T Consensus 119 G~i~~~~~g--~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 119 GKIISANMT--RPSDPKTAEKFNEL 141 (152)
T ss_dssp SCEEESSCC--CTTCHHHHHHHHHH
T ss_pred CeEEEccCC--CCCHHHHHHHHHHH
Confidence 699986644 23334455555543
No 93
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.77 E-value=6e-19 Score=144.54 Aligned_cols=89 Identities=16% Similarity=0.158 Sum_probs=67.9
Q ss_pred ccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC--------CCHH
Q 025474 71 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GSVE 142 (252)
Q Consensus 71 ~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~--------~~~~ 142 (252)
-+..+|+|++.|.+|+.++++++ +++++|++||++||++|+ +++.|+++++++++.|+.||+|+. ++.+
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~~~--~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~ 84 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFDQL--KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDE 84 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGGGG--TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC--------
T ss_pred chhheeeeEEEcCCCCEecHHHc--CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHH
Confidence 36788999999999999999998 456777778899999999 999999999999999999999997 4567
Q ss_pred HHHHHH-HHhCCCceeeecCC
Q 025474 143 QARTFS-EQTKFKGEVYADPN 162 (252)
Q Consensus 143 ~~~~f~-e~~~~~fpll~Dp~ 162 (252)
.+++|. ++++++|+++.|++
T Consensus 85 ~~~~~~~~~~~~~~p~~~d~d 105 (171)
T 3cmi_A 85 EIAQFCQLNYGVTFPIMKKID 105 (171)
T ss_dssp ----------CCCSCBBCCCB
T ss_pred HHHHHHHhccCCCceEEeecc
Confidence 889999 99999999999765
No 94
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.77 E-value=3.1e-18 Score=144.71 Aligned_cols=138 Identities=10% Similarity=0.046 Sum_probs=103.2
Q ss_pred ccccCCC--CCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHh-HHHHHHHHHHcHHHHHhC---CCEEEEEeCC---
Q 025474 69 EDTKNLL--DTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDAS---GVALVLIGPG--- 139 (252)
Q Consensus 69 ~~~g~~a--p~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~-C~~el~~L~~~~~~l~~~---Gv~vV~Vs~~--- 139 (252)
..+|+.+ |+|++.|.+|+.++++++ +++++|++||++|||. |+.+++.|+++++++.+. +++||+|+.|
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~~v~l~~~--~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~ 90 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGNEFTEKNL--LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPAR 90 (200)
T ss_dssp ---CCCCCCCCCEEEETTSCEEEGGGG--TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTT
T ss_pred hccCCCCcCCCEEEEcCCCCEEeHHHc--CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCC
Confidence 3567775 999999999999999998 4567888889999996 999999999999999864 8999999998
Q ss_pred -CHHHHHHHHHHhCCCceeeec---CChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCcccc
Q 025474 140 -SVEQARTFSEQTKFKGEVYAD---PNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 215 (252)
Q Consensus 140 -~~~~~~~f~e~~~~~fpll~D---p~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~ 215 (252)
+++.+++|.++++.+|+.+.+ ....+.++||+.... |.... .| ..+.. ...
T Consensus 91 d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~-----p~~~~-------~~------~~~~~-------~~~ 145 (200)
T 2b7k_A 91 DSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFST-----PPNVK-------PG------QDYLV-------DHS 145 (200)
T ss_dssp CCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------------------------CT-------TTC
T ss_pred CCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEee-----ccccC-------CC------CCcee-------eec
Confidence 578999999999999988764 457788999986331 10000 00 00000 124
Q ss_pred ceEEEEeCCCCeEEEEEeC
Q 025474 216 GGIIVAGPGKSNISYIHRD 234 (252)
Q Consensus 216 GG~fVid~ggg~I~~~h~~ 234 (252)
+.+||||++ |+|++.+.+
T Consensus 146 ~~~~liD~~-G~i~~~~~g 163 (200)
T 2b7k_A 146 IFFYLMDPE-GQFVDALGR 163 (200)
T ss_dssp CCEEEECTT-SCEEEEECT
T ss_pred ceEEEECCC-CcEEEEeCC
Confidence 579999998 699998865
No 95
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.77 E-value=1.1e-17 Score=129.34 Aligned_cols=127 Identities=14% Similarity=0.161 Sum_probs=104.2
Q ss_pred cCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC-HHHHHHHHHH
Q 025474 72 KNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQ 150 (252)
Q Consensus 72 g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~-~~~~~~f~e~ 150 (252)
|..+|+|++.|.+|+.++++++ ++ +.+|++|++.||+.|+.+++.|.++++++. ++.++.|+.++ .+.+++|.++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~~~-~~-k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~ 77 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGESL-LG-KPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNK 77 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGGGG-TT-SCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHH
T ss_pred CCCCCCcccccCCCCEeeHHHh-CC-CeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHH
Confidence 5679999999999999999998 44 445556669999999999999999999886 89999999875 6899999999
Q ss_pred hCC-CceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCeEE
Q 025474 151 TKF-KGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNIS 229 (252)
Q Consensus 151 ~~~-~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~I~ 229 (252)
+++ +|+++.|++..+.+.||+.. .|..||+|++ |+|.
T Consensus 78 ~~~~~~~~~~d~~~~~~~~~~i~~-----------------------------------------~P~~~~id~~-g~i~ 115 (136)
T 1zzo_A 78 YPVKTFTQLADTDGSVWANFGVTQ-----------------------------------------QPAYAFVDPH-GNVD 115 (136)
T ss_dssp TTCTTSEEEECTTCHHHHHTTCCS-----------------------------------------SSEEEEECTT-CCEE
T ss_pred cCCCceEEEEcCCcHHHHHcCCCC-----------------------------------------CceEEEECCC-CCEE
Confidence 999 99999999998888777521 3468999988 5888
Q ss_pred EEEeCCCCCCCCCHHHHHHHh
Q 025474 230 YIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 230 ~~h~~~~~~D~p~~~eIL~al 250 (252)
.+.+. .+.+++.+.+
T Consensus 116 -~~~g~-----~~~~~l~~~l 130 (136)
T 1zzo_A 116 -VVRGR-----MSQDELTRRV 130 (136)
T ss_dssp -EEESC-----CCHHHHHHHH
T ss_pred -EEecC-----CCHHHHHHHH
Confidence 77653 2355665554
No 96
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.77 E-value=5e-18 Score=156.72 Aligned_cols=124 Identities=10% Similarity=0.106 Sum_probs=109.5
Q ss_pred CccccCCCCCcE-----EecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC---
Q 025474 68 SEDTKNLLDTVK-----VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--- 139 (252)
Q Consensus 68 ~~~~g~~ap~f~-----l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~--- 139 (252)
.+.+|+.+|+|+ +.|.+|+.++++++ +++++|++||++||+.|+.+++.|.++++++++.|+.||+|+.+
T Consensus 50 ~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl--~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~ 127 (352)
T 2hyx_A 50 QLESCGTAPDLKGITGWLNTPGNKPIDLKSL--RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYA 127 (352)
T ss_dssp SCCCCCBCCCCCSCCEEESSGGGCCCCGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSG
T ss_pred ccCCCCcCCCccccccccCCCCCCEEcHHHh--CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCccc
Confidence 468899999999 99999999999998 45677888889999999999999999999999999999999874
Q ss_pred ---CHHHHHHHHHHhCCCceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccc
Q 025474 140 ---SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 216 (252)
Q Consensus 140 ---~~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~G 216 (252)
+.+.+++|+++++++|+++.|++..+.++||+.. .|
T Consensus 128 ~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~-----------------------------------------~P 166 (352)
T 2hyx_A 128 FEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRY-----------------------------------------WP 166 (352)
T ss_dssp GGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCCE-----------------------------------------ES
T ss_pred ccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCCc-----------------------------------------cC
Confidence 5789999999999999999999988888777521 34
Q ss_pred eEEEEeCCCCeEEEEEeCC
Q 025474 217 GIIVAGPGKSNISYIHRDK 235 (252)
Q Consensus 217 G~fVid~ggg~I~~~h~~~ 235 (252)
.+||||++ |+|++.+.+.
T Consensus 167 t~~lID~~-G~Iv~~~~G~ 184 (352)
T 2hyx_A 167 AEYLIDAT-GTVRHIKFGE 184 (352)
T ss_dssp EEEEECTT-SBEEEEEESB
T ss_pred EEEEEeCC-CeEEEEEcCC
Confidence 78999998 6999998863
No 97
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.76 E-value=4.2e-17 Score=132.32 Aligned_cols=120 Identities=15% Similarity=0.115 Sum_probs=100.1
Q ss_pred CccccCCCCCcEEecC--CCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC-CHHHH
Q 025474 68 SEDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQA 144 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~--~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~-~~~~~ 144 (252)
...+|+.+|+|++.|. +|+.+.++++.++ +++|++|+++|||+|+.+++.|.+++++ |+.+++|+.+ +.+.+
T Consensus 21 ~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~g-k~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~~ 95 (168)
T 2b1k_A 21 SALIGKPVPKFRLESLDNPGQFYQADVLTQG-KPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQKA 95 (168)
T ss_dssp CTTTTSBCCCCEEEESSSTTCEEEGGGGCCS-SCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHHH
T ss_pred ccccCCcCCCeEeecccCCCcEeehhHhcCC-CEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHHH
Confidence 4578999999999999 9999999886444 4556666799999999999999887654 8999999964 56789
Q ss_pred HHHHHHhCCCce-eeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeC
Q 025474 145 RTFSEQTKFKGE-VYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 223 (252)
Q Consensus 145 ~~f~e~~~~~fp-ll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ 223 (252)
++|.++++++|+ ++.|++..+.+.||+.. .|.+||+|+
T Consensus 96 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~ 134 (168)
T 2b1k_A 96 ISWLKELGNPYALSLFDGDGMLGLDLGVYG-----------------------------------------APETFLIDG 134 (168)
T ss_dssp HHHHHHHCCCCSEEEEETTCHHHHHHTCCS-----------------------------------------SSEEEEECT
T ss_pred HHHHHHcCCCCceeeECcchHHHHHcCccc-----------------------------------------cCEEEEECC
Confidence 999999999999 78898888887776531 346999999
Q ss_pred CCCeEEEEEeC
Q 025474 224 GKSNISYIHRD 234 (252)
Q Consensus 224 ggg~I~~~h~~ 234 (252)
+ |+|++.+.+
T Consensus 135 ~-G~i~~~~~g 144 (168)
T 2b1k_A 135 N-GIIRYRHAG 144 (168)
T ss_dssp T-SBEEEEEES
T ss_pred C-CeEEEEEeC
Confidence 8 699999886
No 98
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.74 E-value=1.6e-17 Score=132.44 Aligned_cols=121 Identities=17% Similarity=0.107 Sum_probs=98.2
Q ss_pred CccccCCCCCcEEecCCC--------CeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 68 SEDTKNLLDTVKVYDVNG--------NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G--------~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
...+|+.+|+|++.|.+| +.++++++ .++.+|++|++.||+.|+.+++.|.+++++ .++.++.|+.+
T Consensus 7 ~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~--~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~~ 81 (156)
T 1kng_A 7 SALIGRPAPQTALPPLEGLQADNVQVPGLDPAAF--KGKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGINYK 81 (156)
T ss_dssp -----CBCCCCCBCCCTTCEETTEECCCBCGGGG--TTSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEEES
T ss_pred hHHhCCCCCCceeeeccCcccccccCceechHHh--CCCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEECC
Confidence 468899999999999999 99999998 355566677799999999999999987765 45999999975
Q ss_pred -CHHHHHHHHHHhCCCce-eeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccce
Q 025474 140 -SVEQARTFSEQTKFKGE-VYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 217 (252)
Q Consensus 140 -~~~~~~~f~e~~~~~fp-ll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG 217 (252)
+.+.+++|.++++++|+ ++.|++..+.+.||+.. .|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~ 120 (156)
T 1kng_A 82 DAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG-----------------------------------------VPE 120 (156)
T ss_dssp CCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS-----------------------------------------SCE
T ss_pred CCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCc-----------------------------------------cCe
Confidence 56889999999999999 99999888888777531 346
Q ss_pred EEEEeCCCCeEEEEEeCC
Q 025474 218 IIVAGPGKSNISYIHRDK 235 (252)
Q Consensus 218 ~fVid~ggg~I~~~h~~~ 235 (252)
+||+|++ |+|++.+.+.
T Consensus 121 ~~~id~~-G~i~~~~~g~ 137 (156)
T 1kng_A 121 TFVVGRE-GTIVYKLVGP 137 (156)
T ss_dssp EEEECTT-SBEEEEEESC
T ss_pred EEEEcCC-CCEEEEEeCC
Confidence 8999998 6999988763
No 99
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.73 E-value=1.3e-17 Score=134.26 Aligned_cols=131 Identities=9% Similarity=0.068 Sum_probs=106.2
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC------CHH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SVE 142 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~------~~~ 142 (252)
..+++.+| ++.|.+|+.++++++ +++++|++|+++||++|+.+++.|.+++++++..|+++|+|+.+ +.+
T Consensus 14 ~~~~~~~p--~l~~~~g~~~~~~~~--~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~ 89 (164)
T 2h30_A 14 ATVPHTMS--TMKTADNRPASVYLK--KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDG 89 (164)
T ss_dssp CCHHHHHT--TCEETTSSBGGGGCC--TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTT
T ss_pred cccCCcCC--ccCCCCCCEeeHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHH
Confidence 35567677 788999999999987 44566777789999999999999999999999999999999964 456
Q ss_pred HHHHHHHHhCCC-ceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEE
Q 025474 143 QARTFSEQTKFK-GEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 221 (252)
Q Consensus 143 ~~~~f~e~~~~~-fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVi 221 (252)
.+++|.++++++ ++++.|++..+.+.||+.. .|..||+
T Consensus 90 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~li 128 (164)
T 2h30_A 90 EFQKWYAGLNYPKLPVVTDNGGTIAQNLNISV-----------------------------------------YPSWALI 128 (164)
T ss_dssp HHHHHHTTSCCTTSCEEECTTCHHHHHTTCCS-----------------------------------------SSEEEEE
T ss_pred HHHHHHHhCCCCcceEEEcCchHHHHHcCCCc-----------------------------------------cceEEEE
Confidence 888898888898 8999999999888887531 3468999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025474 222 GPGKSNISYIHRDKEAGDDPDIQDILKAC 250 (252)
Q Consensus 222 d~ggg~I~~~h~~~~~~D~p~~~eIL~al 250 (252)
|++ |+|++.+.+. .+.+++.+.+
T Consensus 129 d~~-G~i~~~~~g~-----~~~~~l~~~i 151 (164)
T 2h30_A 129 GKD-GDVQRIVKGS-----INEAQALALI 151 (164)
T ss_dssp CTT-SCEEEEEESC-----CCHHHHHHHH
T ss_pred CCC-CcEEEEEcCC-----CCHHHHHHHH
Confidence 998 6999988763 2455665554
No 100
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.73 E-value=1.2e-17 Score=132.19 Aligned_cols=99 Identities=13% Similarity=0.090 Sum_probs=83.3
Q ss_pred ccCCCCC-cEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh-CCCEEEEEeCC-CHHHHHHH
Q 025474 71 TKNLLDT-VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPG-SVEQARTF 147 (252)
Q Consensus 71 ~g~~ap~-f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~-~Gv~vV~Vs~~-~~~~~~~f 147 (252)
.++.+|+ |++.|.+|+.++++++ +++++|++|+++||+.|+.+++.|.++++++.+ .++.+|+|+.+ +.+.+++|
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSL--AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDY 80 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHH
Confidence 5789999 9999999999999998 456778888899999999999999999999985 78999999998 46789999
Q ss_pred HHHhCC-Cceeee-cCChHHHHHcCC
Q 025474 148 SEQTKF-KGEVYA-DPNHSSYEALSF 171 (252)
Q Consensus 148 ~e~~~~-~fpll~-Dp~~~ly~alGv 171 (252)
.+++++ .++++. |++..+.++||+
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 81 YAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp HTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred HHhCCccccccCchHHHHHHHHHcCC
Confidence 998875 466554 556666666664
No 101
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.71 E-value=1.5e-16 Score=131.46 Aligned_cols=149 Identities=11% Similarity=0.104 Sum_probs=103.6
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCH-hHHHHHHHHHHcHHHHHhCC--CEEEEEeCC----CHH
Q 025474 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDASG--VALVLIGPG----SVE 142 (252)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp-~C~~el~~L~~~~~~l~~~G--v~vV~Vs~~----~~~ 142 (252)
.+|.++|+|+|.|.+|++++|+++ +++++|++||.+||| .|..++++|.++++++++.| +++|+|+.| +++
T Consensus 7 P~~~~~PdF~L~d~~G~~v~l~d~--~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~ 84 (170)
T 4hde_A 7 PLNWDLETFQFTNQDGKPFGTKDL--KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPE 84 (170)
T ss_dssp CCCBCCCCCEEECTTSCEEEHHHH--TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHH
T ss_pred CCCCcCCCcEEECCCCCEEeHHHh--CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHH
Confidence 468899999999999999999998 667888899999998 79999999999999887765 778888864 678
Q ss_pred HHHHHHHHhCCCce---eeecCChH-HHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceE
Q 025474 143 QARTFSEQTKFKGE---VYADPNHS-SYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 218 (252)
Q Consensus 143 ~~~~f~e~~~~~fp---ll~Dp~~~-ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~ 218 (252)
.+++|.++++..++ ++++++.+ +.+.++ . .+... .+....+.-.-.+.+
T Consensus 85 ~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~-------------------~---~~~~~-----~~~~~~~~~~H~~~~ 137 (170)
T 4hde_A 85 NLKAFIQKFTEDTSNWNLLTGYSLEDITKFSK-------------------D---NFQSL-----VDKPENGQVIHGTSF 137 (170)
T ss_dssp HHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHH-------------------H---HHCCC-----CBCCTTSCCBCCCEE
T ss_pred HHHHHHHHcCCCCCCceecCcccHHHHHHHHH-------------------h---ccccc-----ccCCCCceEEeeeEE
Confidence 99999999886654 45554332 111110 0 01100 000000010123578
Q ss_pred EEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 219 IVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 219 fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
||||++ |+|+..|.+.. ..+.++|++.++
T Consensus 138 ~liD~~-G~i~~~~~g~~---~~~~~~l~~~ik 166 (170)
T 4hde_A 138 YLIDQN-GKVMKKYSGIS---NTPYEDIIRDMK 166 (170)
T ss_dssp EEECTT-SCEEEEEESSS---SCCHHHHHHHHH
T ss_pred EEEcCC-CeEEEEECCCC---CCCHHHHHHHHH
Confidence 999998 69998887643 345677776553
No 102
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.71 E-value=1.9e-17 Score=131.60 Aligned_cols=127 Identities=11% Similarity=0.081 Sum_probs=100.6
Q ss_pred cccCCCCC-cEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh-CCCEEEEEeCCC-HHHHHH
Q 025474 70 DTKNLLDT-VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGS-VEQART 146 (252)
Q Consensus 70 ~~g~~ap~-f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~-~Gv~vV~Vs~~~-~~~~~~ 146 (252)
..++.+|+ |++.|.+| .++++++ +++++|++|+++||+.|+.+++.|.++++++.+ .++.+++|+.+. .+.+++
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~ 79 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSL--AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAG 79 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGG--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHh--CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHH
Confidence 46899999 99999999 9999998 456777888899999999999999999999984 789999999984 578899
Q ss_pred HHHHhCC-Cceeee-cCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEe-C
Q 025474 147 FSEQTKF-KGEVYA-DPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG-P 223 (252)
Q Consensus 147 f~e~~~~-~fpll~-Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid-~ 223 (252)
|.+++++ .++++. |++..+.+.||+. ..|.+||+| +
T Consensus 80 ~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~Pt~~lid~~ 118 (146)
T 1o8x_A 80 YFAKMPWLAVPFAQSEAVQKLSKHFNVE-----------------------------------------SIPTLIGVDAD 118 (146)
T ss_dssp HHTTCSSEECCGGGHHHHHHHHHHTTCC-----------------------------------------SSSEEEEEETT
T ss_pred HHHHCCceeeccchhhHHHHHHHHhCCC-----------------------------------------CCCEEEEEECC
Confidence 9988774 466554 6566666666542 145789999 7
Q ss_pred CCCeEEEEEeCCCCCCCC
Q 025474 224 GKSNISYIHRDKEAGDDP 241 (252)
Q Consensus 224 ggg~I~~~h~~~~~~D~p 241 (252)
+ |+|++.+......+++
T Consensus 119 ~-G~i~~~~~~~~~~~~~ 135 (146)
T 1o8x_A 119 S-GDVVTTRARATLVKDP 135 (146)
T ss_dssp T-CCEEESCHHHHHTTCT
T ss_pred C-CeEEEecchhHHhhCC
Confidence 7 6899877654444443
No 103
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.66 E-value=5.5e-17 Score=128.00 Aligned_cols=99 Identities=14% Similarity=0.144 Sum_probs=79.5
Q ss_pred cccCCCCCc-EEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHH-hCCCEEEEEeCCC-HHHHHH
Q 025474 70 DTKNLLDTV-KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMD-ASGVALVLIGPGS-VEQART 146 (252)
Q Consensus 70 ~~g~~ap~f-~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~-~~Gv~vV~Vs~~~-~~~~~~ 146 (252)
..|+.+|+| ++.|.+| .++++++ +++.+|++|+++||+.|+.+++.|.++++++. +.++.+++|+.+. .+.+++
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~ 79 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSL--VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHD 79 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGG--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHH
T ss_pred chhhhCccceEeecCCC-cCcHHHh--CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHH
Confidence 568999997 9999999 9999998 45667778889999999999999999999998 4789999999986 468889
Q ss_pred HHHHhCC-Cceeee-cCChHHHHHcCC
Q 025474 147 FSEQTKF-KGEVYA-DPNHSSYEALSF 171 (252)
Q Consensus 147 f~e~~~~-~fpll~-Dp~~~ly~alGv 171 (252)
|.+++++ .+++.. |++..+.++||+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 80 YYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp HHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred HHHhCCceEeeccchhHHHHHHHHcCC
Confidence 9888764 344433 445555555553
No 104
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.45 E-value=1.4e-17 Score=130.78 Aligned_cols=124 Identities=9% Similarity=0.150 Sum_probs=95.9
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh--CCCEEEEEeCCC-HHHHHHHHH
Q 025474 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGS-VEQARTFSE 149 (252)
Q Consensus 73 ~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~--~Gv~vV~Vs~~~-~~~~~~f~e 149 (252)
+.+|+|++.|.+|+.+++++++++++.+|++|+++|||+|+.+++.|.++++++++ .++.+++|+.++ .+.+++|.+
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~ 81 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMM 81 (143)
Confidence 46899999999999999999334443788888999999999999999999999853 589999999984 478899999
Q ss_pred HhCCCce---eeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCC
Q 025474 150 QTKFKGE---VYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 226 (252)
Q Consensus 150 ~~~~~fp---ll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg 226 (252)
+++++++ +..|++..+.++||+. ..|..||+|++ |
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~-G 119 (143)
T 2lus_A 82 ESHGDWLAIPYRSGPASNVTAKYGIT-----------------------------------------GIPALVIVKKD-G 119 (143)
Confidence 9988865 3445555555555531 13468889987 5
Q ss_pred eEEEEEeCCCCC
Q 025474 227 NISYIHRDKEAG 238 (252)
Q Consensus 227 ~I~~~h~~~~~~ 238 (252)
+|++.+-..+..
T Consensus 120 ~i~~~~~~~~~~ 131 (143)
T 2lus_A 120 TLISMNGRGEVQ 131 (143)
Confidence 888886554444
No 105
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.63 E-value=1.6e-16 Score=130.08 Aligned_cols=99 Identities=11% Similarity=0.099 Sum_probs=80.3
Q ss_pred cccCCCCCc-EEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh-CCCEEEEEeCCCH-HHHHH
Q 025474 70 DTKNLLDTV-KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSV-EQART 146 (252)
Q Consensus 70 ~~g~~ap~f-~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~-~Gv~vV~Vs~~~~-~~~~~ 146 (252)
.+|+.+|+| ++.|.+| .++|+++ +++++|++|+++||++|+++++.|.++++++.+ .++.||+|+.+.. +.+++
T Consensus 23 ~vG~~~P~f~~l~~~~g-~v~l~~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~ 99 (165)
T 3s9f_A 23 GVAKHLGEALKLRKQAD-TADMDSL--SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNA 99 (165)
T ss_dssp HHHHHHHHTSCEEETTE-EECSGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHH
T ss_pred hhcccCCcceeeecCCC-cccHHHc--CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHH
Confidence 689999999 9999999 9999998 456788888899999999999999999999986 7999999998865 78889
Q ss_pred HHHHhCC-CceeeecCC-hHHHHHcCC
Q 025474 147 FSEQTKF-KGEVYADPN-HSSYEALSF 171 (252)
Q Consensus 147 f~e~~~~-~fpll~Dp~-~~ly~alGv 171 (252)
|.+++++ .++++.|.. ..+.+.||+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 100 YYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp HHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred HHHhCCCcccccCchhHHHHHHHHcCC
Confidence 9988764 244443322 455555443
No 106
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.40 E-value=5.3e-12 Score=107.56 Aligned_cols=148 Identities=14% Similarity=0.214 Sum_probs=113.1
Q ss_pred ccccCCCCC--cEEe-------cCC----C--CeEeCCCcc-CCCcEEEEEEcCCCCHhHHH-HHHHHHHcHHHH-HhCC
Q 025474 69 EDTKNLLDT--VKVY-------DVN----G--NAIPISDLW-KDRKAVVAFARHFGCVLCRK-RADYLAAKKDVM-DASG 130 (252)
Q Consensus 69 ~~~g~~ap~--f~l~-------d~~----G--~~v~ls~l~-~~~~vvlvF~R~~~Cp~C~~-el~~L~~~~~~l-~~~G 130 (252)
..+|+++|. +++. +.+ | +.+++++++ ++++|||+++++++.|.|.. +++.+.+.++++ +++|
T Consensus 26 ~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kG 105 (199)
T 4h86_A 26 DLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKE 105 (199)
T ss_dssp TTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSC
T ss_pred HHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcC
Confidence 468899995 3321 111 3 457777776 57889999999999999987 699999999875 7899
Q ss_pred C-EEEEEeCCCHHHHHHHHHHhCCC----ceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhhhhhcccccccc
Q 025474 131 V-ALVLIGPGSVEQARTFSEQTKFK----GEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEGYRQDWKLSFER 205 (252)
Q Consensus 131 v-~vV~Vs~~~~~~~~~f~e~~~~~----fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g 205 (252)
+ +|++|+..++.-.++|.+.++.. +++++|++.++.++||+..... + .+.
T Consensus 106 vd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~~~--~-------------gg~---------- 160 (199)
T 4h86_A 106 VDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVG--D-------------GVY---------- 160 (199)
T ss_dssp CCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEEEE--T-------------TEE----------
T ss_pred CcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCceeecC--C-------------Ccc----------
Confidence 8 69999999999999999987764 7899999999999999854321 0 011
Q ss_pred cccCCCccccceEEEEeCCCCeEEEEEeCCCCCCC---CCHHHHHHHh
Q 025474 206 DTVSRGGWQQGGIIVAGPGKSNISYIHRDKEAGDD---PDIQDILKAC 250 (252)
Q Consensus 206 ~~~~g~~~q~GG~fVid~ggg~I~~~h~~~~~~D~---p~~~eIL~al 250 (252)
.-.+-.+|++ + |+|.|.+++.++++. -+.|.||+.|
T Consensus 161 -------RS~Rya~IVd-D-GvV~~~~vE~~pg~~~~vS~ae~vL~~L 199 (199)
T 4h86_A 161 -------WSGRWAMVVE-N-GIVTYAAKETNPGTDVTVSSVESVLAHL 199 (199)
T ss_dssp -------EECSEEEEEE-T-TEEEEEEECSSTTTCCSTTSHHHHHTTC
T ss_pred -------eeeEEEEEEE-C-CEEEEEEEeCCCCCCCcccCHHHHHhcC
Confidence 1234688998 5 599999999988754 4678888754
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.00 E-value=1.5e-09 Score=83.64 Aligned_cols=64 Identities=8% Similarity=0.053 Sum_probs=46.6
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 73 ~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+.+++++..+.+|...... . ..++.+|++|++.||+.|+...+.|.++.+++. .++.++.|..+
T Consensus 4 ~~~~~l~~~~~~~~~~~~~-~-~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~ 67 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEE-A-KEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE 67 (126)
T ss_dssp CCSSCTTTTCCSEESSTTT-C-CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT
T ss_pred cccCCCCccccchhHHHHH-H-hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC
Confidence 3455555555555443322 2 345667777889999999999999999888876 67999999954
No 108
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.92 E-value=5.1e-10 Score=90.25 Aligned_cols=67 Identities=16% Similarity=0.123 Sum_probs=44.7
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEc-CCCCHhHHHHHHHH---HHcHHHHHhCCCEEEEEeCCCH
Q 025474 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFAR-HFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R-~~~Cp~C~~el~~L---~~~~~~l~~~Gv~vV~Vs~~~~ 141 (252)
...+...+++ +..|+.+.+++. +++.+|++|+ +.||++|+.+++.| .+..+.+ ..++.++.|..+..
T Consensus 24 ~~~~~~~~~~---~~~~~~~~~a~~--~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~-~~~~~~v~vd~~~~ 94 (154)
T 2ju5_A 24 RPIAAANLQW---ESYAEALEHSKQ--DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFA-GVHLHMVEVDFPQK 94 (154)
T ss_dssp CSSCCCCCCE---ECHHHHHHHHHH--HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHH-HHHCEEEEEECCSS
T ss_pred hhcccCCCCC---CCHHHHHHHHHh--CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHh-cCcEEEEEecCccc
Confidence 3455556666 445777777665 3445556666 99999999999999 4443333 34678888877653
No 109
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.76 E-value=8.7e-08 Score=74.11 Aligned_cols=65 Identities=9% Similarity=0.131 Sum_probs=44.2
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
.....+|+++ +.+++.+..... +++.+|++|++.||+.|+...+.|.++.+++.. ++.++.|..+
T Consensus 19 ~~~~~~~~~~--~~~~~~~~~~~~--~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d 83 (128)
T 3ul3_B 19 RMFKKVPRLQ--QNGSNIINGVNM--KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLD 83 (128)
T ss_dssp -------CCC--CCCCSSSSBTTS--CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGG
T ss_pred HHhccCCccc--cCCccHHHHHHc--cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECC
Confidence 3455666666 445555555443 567888888999999999999999999888863 5788888744
No 110
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.71 E-value=6e-08 Score=75.16 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=66.6
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHH--HcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeeecCChHHHHHcCCcc
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLA--AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~--~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~ 173 (252)
.++.+|++|++.||++|+...+.|. ++..++.. ++.++.|..++ .|.+..+.+.||+..
T Consensus 28 ~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~------------------~~~~~~l~~~~~v~~ 88 (133)
T 3fk8_A 28 THKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN------------------FDRNLELSQAYGDPI 88 (133)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT------------------TTSSHHHHHHTTCGG
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc------------------ccchHHHHHHhCCcc
Confidence 3567788889999999999999999 77777754 68999998864 355556666666521
Q ss_pred ccccccChHHHHHHHHHHhhhhhhcccccccccccCCCccccceEEEEeCCCCeEEEEEeCCCCCC--CCCHHHHHHHh
Q 025474 174 GVLVTFTPKVCLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYIHRDKEAGD--DPDIQDILKAC 250 (252)
Q Consensus 174 ~~~~~~~P~~~~~~~~~~~~g~~~~~k~~~~g~~~~g~~~q~GG~fVid~ggg~I~~~h~~~~~~D--~p~~~eIL~al 250 (252)
. ...|..+++|++ |++++.+.+....+ ..+.+++.+.+
T Consensus 89 ~--------------------------------------~~~Pt~~~~d~~-G~~~~~~~g~~~~~~~~~~~~~l~~~l 128 (133)
T 3fk8_A 89 Q--------------------------------------DGIPAVVVVNSD-GKVRYTTKGGELANARKMSDQGIYDFF 128 (133)
T ss_dssp G--------------------------------------GCSSEEEEECTT-SCEEEECCSCTTTTGGGSCHHHHHHHH
T ss_pred C--------------------------------------CccceEEEECCC-CCEEEEecCCcccccccCCHHHHHHHH
Confidence 1 014578999887 69998887743322 23444444433
No 111
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.68 E-value=5.5e-09 Score=81.87 Aligned_cols=92 Identities=11% Similarity=0.101 Sum_probs=64.1
Q ss_pred cccCCCCCcE-EecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHH---HHcHHHHHhCCCEEEEEeCCCH-HHH
Q 025474 70 DTKNLLDTVK-VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV-EQA 144 (252)
Q Consensus 70 ~~g~~ap~f~-l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~vV~Vs~~~~-~~~ 144 (252)
.++..+|+|. +.+.++....++++ +++.+|++|++.||++|++..+.+ .++.+++. ++.++.|..+.. +..
T Consensus 5 ~~~~~~~~f~~~~~~~~~~~~l~~~--~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~~~~ 80 (134)
T 2fwh_A 5 AQTQTHLNFTQIKTVDELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTANDAQD 80 (134)
T ss_dssp -----CCCCEECCSHHHHHHHHHHH--TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCCHHH
T ss_pred cccccCCCcEEecCHHHHHHHHHHh--cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCcchH
Confidence 5678889998 66666666666665 355667777899999999998888 67666664 599999998654 456
Q ss_pred HHHHHHhCCC-ce--eeecCChHH
Q 025474 145 RTFSEQTKFK-GE--VYADPNHSS 165 (252)
Q Consensus 145 ~~f~e~~~~~-fp--ll~Dp~~~l 165 (252)
.++++++++. +| ++.|++.++
T Consensus 81 ~~l~~~~~v~~~Pt~~~~d~~G~~ 104 (134)
T 2fwh_A 81 VALLKHLNVLGLPTILFFDGQGQE 104 (134)
T ss_dssp HHHHHHTTCCSSSEEEEECTTSCB
T ss_pred HHHHHHcCCCCCCEEEEECCCCCE
Confidence 6677777754 34 788887765
No 112
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.56 E-value=4.7e-07 Score=67.70 Aligned_cols=41 Identities=15% Similarity=-0.014 Sum_probs=34.6
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
++.+|++|++.||+.|+...+.|.++.+++. ++.++.|..+
T Consensus 24 ~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~ 64 (111)
T 2pu9_C 24 DKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCN 64 (111)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS
T ss_pred CCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecC
Confidence 5667777789999999999999999888765 5888888876
No 113
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.56 E-value=3.3e-08 Score=77.33 Aligned_cols=80 Identities=9% Similarity=0.043 Sum_probs=60.3
Q ss_pred EecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhC---CCce
Q 025474 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGE 156 (252)
Q Consensus 80 l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~---~~fp 156 (252)
+.+.+|..+.++++ +++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+.... ++++++ +|.-
T Consensus 36 l~~~~~~~~~l~~~--~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~---~~~~~~v~~~Pt~ 109 (141)
T 3hxs_A 36 IADYENHSKEWKYL--GDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPE---LARDFGIQSIPTI 109 (141)
T ss_dssp TCCCSSCCCCCCCC--CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHH---HHHHTTCCSSSEE
T ss_pred hhccccchhHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHH---HHHHcCCCCcCEE
Confidence 56678888888876 556677777899999999999999999888864 58999999886543 344444 4444
Q ss_pred eeecCChHH
Q 025474 157 VYADPNHSS 165 (252)
Q Consensus 157 ll~Dp~~~l 165 (252)
++.|++..+
T Consensus 110 ~~~~~~g~~ 118 (141)
T 3hxs_A 110 WFVPMKGEP 118 (141)
T ss_dssp EEECSSSCC
T ss_pred EEEeCCCCE
Confidence 777777654
No 114
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.48 E-value=8.4e-07 Score=67.63 Aligned_cols=42 Identities=17% Similarity=0.078 Sum_probs=34.1
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+++.+|++|++.||++|++..+.|.++.+++. ++.++.|..+
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~ 77 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCN 77 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecC
Confidence 34556667779999999999999999888764 6888888776
No 115
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.47 E-value=7.4e-07 Score=65.59 Aligned_cols=46 Identities=15% Similarity=0.101 Sum_probs=36.3
Q ss_pred cCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 94 ~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
.+.++.++++|++.||+.|+...+.|.++.+++.+ .+.++.|..+.
T Consensus 14 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~ 59 (105)
T 1nsw_A 14 IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDE 59 (105)
T ss_dssp HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTT
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcC
Confidence 34556677778899999999999999998887754 38888887653
No 116
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=1.2e-06 Score=67.14 Aligned_cols=44 Identities=9% Similarity=0.101 Sum_probs=30.2
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHH---HHcHHHHHhCCCEEEEEeCCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
.++.+|++|++.||+.|+...+.+ .+..+.+ +.++.++.|..+.
T Consensus 26 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~~~vd~~~ 72 (130)
T 2kuc_A 26 EDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYF-NRHFVNLKMDMEK 72 (130)
T ss_dssp HSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHH-HHHSEEEEECSSS
T ss_pred cCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHH-hcCeEEEEEecCC
Confidence 356677778899999999999988 3333333 3346666666654
No 117
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.44 E-value=1.7e-06 Score=66.80 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=34.9
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
.++.+|++|++.||+.|+...+.|.++.+++. ++.++.|..+
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d 78 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTD 78 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETT
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECc
Confidence 35678888889999999999999999888764 6888887764
No 118
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.43 E-value=2.5e-06 Score=63.52 Aligned_cols=45 Identities=22% Similarity=0.207 Sum_probs=36.5
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
+.++.+|++|++.||+.|+...+.|.++.+++.. .+.++.|..+.
T Consensus 21 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~ 65 (112)
T 1t00_A 21 KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDE 65 (112)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT
T ss_pred hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCC
Confidence 3456677788899999999999999998888754 48888888654
No 119
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.41 E-value=1.7e-06 Score=64.29 Aligned_cols=43 Identities=14% Similarity=0.160 Sum_probs=35.6
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
++.+|++|++.||+.|+...+.|.++.+++.+ ++.++.|..+.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~ 66 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA 66 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc
Confidence 55677777899999999999999998888754 78898888753
No 120
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.39 E-value=2.9e-06 Score=63.72 Aligned_cols=44 Identities=18% Similarity=0.067 Sum_probs=36.6
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
.++.+|++|++.||+.|+...+.|.++.+++.+ ++.++.|..+.
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~ 59 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE 59 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC
Confidence 456677778899999999999999998888864 68999888754
No 121
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.37 E-value=2.5e-07 Score=70.28 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=41.6
Q ss_pred ccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 71 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 71 ~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
.+...+.+.+.+.+.-.-.+.+....++.+|++|++.||+.|+...+.|.++.+++.+ +.++.|..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~ 75 (122)
T 2vlu_A 8 AAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE 75 (122)
T ss_dssp ----CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT
T ss_pred cCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC
Confidence 3455566665544321111111101345666677799999999999999998887653 8888888764
No 122
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.36 E-value=5.3e-06 Score=61.07 Aligned_cols=44 Identities=14% Similarity=0.050 Sum_probs=35.5
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
.++.+|++|++.||+.|+...+.|.++.+++.. .+.++.|..+.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~ 61 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDE 61 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCC
Confidence 456677788899999999999999998887754 48888887653
No 123
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.34 E-value=8e-06 Score=59.75 Aligned_cols=43 Identities=9% Similarity=0.101 Sum_probs=35.2
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+++.+|++|++.||+.|+...+.|.+..+++... +.++.|..+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~ 60 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVD 60 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECC
Confidence 4556677777999999999999999998887654 888888774
No 124
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.33 E-value=4e-08 Score=75.29 Aligned_cols=77 Identities=9% Similarity=0.132 Sum_probs=54.4
Q ss_pred EecCCCCeEeCCC-ccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhC---CCc
Q 025474 80 VYDVNGNAIPISD-LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKG 155 (252)
Q Consensus 80 l~d~~G~~v~ls~-l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~---~~f 155 (252)
+.+.+|....+.+ +.+.++.+|++|++.||+.|+...+.|.++.+++ .++.++.|..+.... ++++++ +|.
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~~~---~~~~~~i~~~Pt 79 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKNGN---AADAYGVSSIPA 79 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTCHH---HHHHTTCCSSSE
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCCHH---HHHhcCCCCCCE
Confidence 3445666666663 4334667778888999999999999999988877 689999999886533 334444 443
Q ss_pred eeeecC
Q 025474 156 EVYADP 161 (252)
Q Consensus 156 pll~Dp 161 (252)
-++.|.
T Consensus 80 ~~~~~~ 85 (118)
T 2f51_A 80 LFFVKK 85 (118)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 355555
No 125
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.32 E-value=7.1e-06 Score=60.15 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=36.2
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
+.++.+|++|++.||+.|+...+.|.+..+++.. ++.++.|..+.
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~ 62 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD 62 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT
T ss_pred hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC
Confidence 3456677777799999999999999998888754 68888887653
No 126
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.32 E-value=2.5e-06 Score=64.77 Aligned_cols=42 Identities=12% Similarity=0.082 Sum_probs=35.6
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+++.+|++|++.||+.|+...+.|.++.+++.+ +.++.|..+
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d 71 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVD 71 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECC
Confidence 467788888999999999999999998887754 888888875
No 127
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.32 E-value=3.1e-06 Score=65.82 Aligned_cols=42 Identities=19% Similarity=0.179 Sum_probs=35.1
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
++.+|++|++.||+.|+...+.|.++.+++ .++.++.|..+.
T Consensus 46 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~v~~~~ 87 (139)
T 3d22_A 46 GKIVLANFSARWCGPSRQIAPYYIELSENY--PSLMFLVIDVDE 87 (139)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCcc
Confidence 556777788999999999999999988876 368999988763
No 128
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.31 E-value=9.9e-07 Score=67.66 Aligned_cols=66 Identities=9% Similarity=0.031 Sum_probs=48.5
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhC---CCceeeecCChH
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPNHS 164 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~---~~fpll~Dp~~~ 164 (252)
+.++.+|++|++.||+.|+...+.|.++.+++.. .+.++.|..+.... ++++++ +|--++.|.+..
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~---l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKHQS---LGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTCHH---HHHHHTCCSSSEEEEESSCTT
T ss_pred cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCCHH---HHHHcCCCccCEEEEEeCCCC
Confidence 3456778888899999999999999998888754 38899999886543 333444 444467777665
No 129
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.31 E-value=3.1e-06 Score=62.06 Aligned_cols=45 Identities=13% Similarity=0.101 Sum_probs=36.0
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
+.++.++++|++.||+.|+...+.|.++..++.+ ++.++.|..+.
T Consensus 16 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~ 60 (109)
T 2yzu_A 16 GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDE 60 (109)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTT
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCC
Confidence 3456677777899999999999999998887754 48888888654
No 130
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.31 E-value=7.2e-06 Score=62.31 Aligned_cols=44 Identities=14% Similarity=0.087 Sum_probs=35.6
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
.++.+|++|++.||+.|+...+.|.++..++.. ++.++.|..+.
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~ 73 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDD 73 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCC
Confidence 455677777899999999999999998887754 58888888653
No 131
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.29 E-value=7.8e-06 Score=62.01 Aligned_cols=43 Identities=16% Similarity=0.083 Sum_probs=35.5
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+.++.+|++|++.||+.|+...+.|.++.+++.+ +.++.|..+
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~ 70 (114)
T 2oe3_A 28 KQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVD 70 (114)
T ss_dssp HHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETT
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECC
Confidence 3466778888899999999999999998887654 888888765
No 132
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.28 E-value=7.3e-06 Score=60.88 Aligned_cols=45 Identities=11% Similarity=0.197 Sum_probs=36.7
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
+.++.+|++|++.||+.|+...+.|.++.+++... +.++.|..+.
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~ 67 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDP 67 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTT
T ss_pred cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCC
Confidence 34567777788999999999999999988877643 8898888764
No 133
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.28 E-value=9.9e-06 Score=58.68 Aligned_cols=42 Identities=12% Similarity=0.054 Sum_probs=35.1
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
.++.+|++|++.||+.|+...+.|.++.+++.+ +.++.|..+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~ 56 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSD 56 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETT
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECC
Confidence 456777778899999999999999998887754 888888875
No 134
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.25 E-value=9.4e-07 Score=68.65 Aligned_cols=70 Identities=14% Similarity=0.197 Sum_probs=49.9
Q ss_pred EecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCC--CEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 80 l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~G--v~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
+.+.+++.+. ++.+.++.+|++|++.||+.|+...+.|.++.+++...+ +.++.|..+... .+++++++.
T Consensus 19 v~~l~~~~~~--~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~v~ 90 (140)
T 2dj1_A 19 VWVLNDGNFD--NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS---MLASKFDVS 90 (140)
T ss_dssp EEECCTTTHH--HHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH---HHHHHTTCC
T ss_pred CEEcChHhHH--HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH---HHHHHCCCC
Confidence 4444554443 334556788889999999999999999999999998764 777777776542 344455543
No 135
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.25 E-value=1.2e-05 Score=59.30 Aligned_cols=44 Identities=16% Similarity=0.124 Sum_probs=35.4
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+.++.+|++|++.||+.|+...+.|.++.+++.. .+.++.|..+
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~ 61 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNID 61 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETT
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECC
Confidence 3466778888899999999999999998887754 4777777765
No 136
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.25 E-value=6.2e-07 Score=70.82 Aligned_cols=78 Identities=17% Similarity=0.132 Sum_probs=58.3
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHH
Q 025474 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSE 149 (252)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e 149 (252)
..+..+++..+.+.+++.+.- ....++.+|++|++.||+.|+...+.|.++..++.. ++.++.|..+.... +.+
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~~--~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~---l~~ 103 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLDK--LLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEPA---LST 103 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHHH--HTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHH---HHH
T ss_pred hcCCccccCCceecCHHHHHH--HHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCHH---HHH
Confidence 456677888888888776642 335667778888899999999999999999888754 48999998876543 334
Q ss_pred HhCC
Q 025474 150 QTKF 153 (252)
Q Consensus 150 ~~~~ 153 (252)
++++
T Consensus 104 ~~~v 107 (148)
T 3p2a_A 104 RFRI 107 (148)
T ss_dssp HTTC
T ss_pred HCCC
Confidence 4444
No 137
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.24 E-value=8.1e-06 Score=60.55 Aligned_cols=42 Identities=17% Similarity=0.192 Sum_probs=35.0
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
.++.+|++|++.||+.|+...+.|.++.+++. ++.++.|..+
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~ 66 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVD 66 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETT
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEcc
Confidence 36778888889999999999999998887764 6888888774
No 138
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.22 E-value=1.3e-05 Score=60.49 Aligned_cols=41 Identities=22% Similarity=0.182 Sum_probs=31.7
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~ 138 (252)
+++.||+.|++.||++|+...+.+.++.+++. ++.++-|..
T Consensus 19 ~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~ 59 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKMIAPKLEELSQSMS--DVVFLKVDV 59 (105)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEET
T ss_pred CCCEEEEEEECCCCCCccCCCcchhhhhhccC--CeEEEEEec
Confidence 35788888999999999999999988776653 455555554
No 139
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.22 E-value=9.7e-06 Score=61.08 Aligned_cols=41 Identities=17% Similarity=0.139 Sum_probs=34.3
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+++.+|++|++.||+.|+...+.|.++.+++ ++.++.|..+
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~ 72 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVD 72 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETT
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECC
Confidence 4566777888999999999999999887766 7888888775
No 140
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.22 E-value=2.9e-07 Score=69.21 Aligned_cols=68 Identities=9% Similarity=0.068 Sum_probs=48.5
Q ss_pred CCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhC---CCceeeecCC
Q 025474 90 ISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPN 162 (252)
Q Consensus 90 ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~---~~fpll~Dp~ 162 (252)
+.+..++++.+|++|++.||+.|+...+.|.++.+++. ++.++.|..+.... ++++++ +|.-++.+..
T Consensus 17 f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~~~~---l~~~~~v~~~Pt~~~~~~G 87 (109)
T 3f3q_A 17 FDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDELGD---VAQKNEVSAMPTLLLFKNG 87 (109)
T ss_dssp HHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHH---HHHHTTCCSSSEEEEEETT
T ss_pred HHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHH---HHHHcCCCccCEEEEEECC
Confidence 33445567788888999999999999999999888774 58999998876543 334444 3433444533
No 141
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.21 E-value=5e-06 Score=64.48 Aligned_cols=45 Identities=13% Similarity=0.042 Sum_probs=36.9
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
+.++.+|++|++.||+.|++..+.|.++.+++.. ++.++.|..+.
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~ 82 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQ 82 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTT
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC
Confidence 4567788888999999999999999998887754 48888887653
No 142
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.21 E-value=7.6e-06 Score=61.29 Aligned_cols=46 Identities=9% Similarity=0.149 Sum_probs=37.5
Q ss_pred ccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 93 l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
+.+.++.+|++|++.||+.|+...+.|.++.+++. ++.++.|..+.
T Consensus 22 ~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~ 67 (112)
T 1syr_A 22 IISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDE 67 (112)
T ss_dssp HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT
T ss_pred HHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCC
Confidence 33456778888889999999999999999888764 68888888764
No 143
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.20 E-value=5.5e-07 Score=74.21 Aligned_cols=68 Identities=16% Similarity=0.212 Sum_probs=47.7
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHH-HHHHHHH--HhCCCceeeecCChHH
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE-QARTFSE--QTKFKGEVYADPNHSS 165 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~-~~~~f~e--~~~~~fpll~Dp~~~l 165 (252)
+++++|+.||++|||+|+.+++.|.++..++. ++.++.|..+... .+++|.. ..++|--++.|.+..+
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~ 123 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNL 123 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCE
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCE
Confidence 45788888999999999999999999887653 6888888766432 2333431 1234444788876444
No 144
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.20 E-value=1.1e-05 Score=59.08 Aligned_cols=43 Identities=16% Similarity=0.111 Sum_probs=35.3
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+++.++++|++.||+.|+...+.|.+..+++. .++.++.|..+
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~ 61 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVD 61 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETT
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEecc
Confidence 45677777889999999999999999888775 46888888775
No 145
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.20 E-value=1.8e-05 Score=59.03 Aligned_cols=41 Identities=20% Similarity=0.176 Sum_probs=34.3
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
++.+|++|++.||+.|+...+.|.++.+++. ++.++.|..+
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~ 68 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVD 68 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT
T ss_pred CCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcc
Confidence 4567777789999999999999999888765 7888888775
No 146
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.16 E-value=2.8e-06 Score=66.25 Aligned_cols=66 Identities=9% Similarity=0.079 Sum_probs=48.6
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC---CceeeecCChHH
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF---KGEVYADPNHSS 165 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~---~fpll~Dp~~~l 165 (252)
.++.+|++|++.||+.|+...+.|.++..++.. ++.++.|..+... ++++++++ |.-++.|.+.++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~---~l~~~~~v~~~Pt~~~~~~~G~~ 105 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQ---ELAGAFGIRSIPSILFIPMEGKP 105 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH---HHHHHTTCCSSCEEEEECSSSCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCH---HHHHHcCCCCCCEEEEECCCCcE
Confidence 456677777899999999999999998888754 4999999988653 33444454 434677776654
No 147
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.15 E-value=5.7e-07 Score=69.31 Aligned_cols=82 Identities=12% Similarity=0.111 Sum_probs=52.9
Q ss_pred EEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhC-CCEEEEEeCCCHHHHHHHHHHhCC---C
Q 025474 79 KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGSVEQARTFSEQTKF---K 154 (252)
Q Consensus 79 ~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~-Gv~vV~Vs~~~~~~~~~f~e~~~~---~ 154 (252)
.+.+.+++.+...-. ..++.+|++|++.||+.|+...+.|.++..++... ++.++.|..+.... ..+++++ |
T Consensus 8 ~v~~l~~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~v~~~P 83 (133)
T 2dj3_A 8 PVKVVVGKTFDAIVM-DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDI---TNDQYKVEGFP 83 (133)
T ss_dssp SSEECCTTTCCCCCT-CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCC---CCSSCCCSSSS
T ss_pred ceEEEcCCCHHHHhc-cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHH---HHhhcCCCcCC
Confidence 445555555433211 23678888889999999999999999999888753 57777777764322 2223343 3
Q ss_pred ceeeecCChH
Q 025474 155 GEVYADPNHS 164 (252)
Q Consensus 155 fpll~Dp~~~ 164 (252)
.-++.|.+..
T Consensus 84 t~~~~~~g~~ 93 (133)
T 2dj3_A 84 TIYFAPSGDK 93 (133)
T ss_dssp EEEEECTTCT
T ss_pred EEEEEeCCCc
Confidence 3356665543
No 148
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.14 E-value=1.2e-06 Score=64.99 Aligned_cols=51 Identities=12% Similarity=0.177 Sum_probs=41.1
Q ss_pred CCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHH
Q 025474 90 ISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 90 ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~ 142 (252)
+.+..+.++.++++|++.||+.|+...+.|.++.+++. ++.++.|..+...
T Consensus 11 ~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~ 61 (105)
T 4euy_A 11 LATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQ 61 (105)
T ss_dssp CSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC-
T ss_pred HHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCH
Confidence 34455567788889999999999999999999888873 6889999887654
No 149
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.13 E-value=9.3e-07 Score=71.55 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=32.5
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHH---HHcHHHHHhCCCEEEEEeCCCH
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~vV~Vs~~~~ 141 (252)
++++||++||++||++|+.....+ .++.+.+++ ++.++.|..+..
T Consensus 46 ~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~ 93 (172)
T 3f9u_A 46 HNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNK 93 (172)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcc
Confidence 467889999999999999864433 333444433 789999988753
No 150
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.12 E-value=3.2e-05 Score=60.49 Aligned_cols=46 Identities=15% Similarity=0.254 Sum_probs=37.5
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~ 141 (252)
+.++.+|++|++.||+.|+...+.|.++.+++.. .+.++.|..+..
T Consensus 22 ~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~ 67 (140)
T 3hz4_A 22 DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATN 67 (140)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTC
T ss_pred hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcC
Confidence 3456777778899999999999999999888865 488888887543
No 151
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.11 E-value=7.2e-08 Score=78.57 Aligned_cols=94 Identities=12% Similarity=0.179 Sum_probs=57.0
Q ss_pred CCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH--HHHHHHH-
Q 025474 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ--ARTFSEQ- 150 (252)
Q Consensus 74 ~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~--~~~f~e~- 150 (252)
..+++...|.+ +.+..... .++.+|++|++.||++|+.+++.|.+..... +.++.++.|..+.... .+.|.-.
T Consensus 26 ~~~~i~w~~~~-~~~~~~~~--~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~-~~~~~~~~v~~d~~~~~~~~~~~~~~ 101 (164)
T 1sen_A 26 FGDHIHWRTLE-DGKKEAAA--SGLPLMVIIHKSWCGACKALKPKFAESTEIS-ELSHNFVMVNLEDEEEPKDEDFSPDG 101 (164)
T ss_dssp SCTTSCBCCHH-HHHHHHHH--HTCCEEEEEECTTCHHHHHHHHHHHTCHHHH-HHHTTSEEEEEEGGGSCSCGGGCTTC
T ss_pred ccccccccCHH-HHHHHHHh--cCCeEEEEEECCCCHHHHHHHHHHHHHHHHh-hcCCeEEEEEecCCchHHHHHhcccC
Confidence 34445444433 33433332 4556677778999999999999999976544 3457788888765432 2233211
Q ss_pred hCCCceeeecCChHHH-HHcCC
Q 025474 151 TKFKGEVYADPNHSSY-EALSF 171 (252)
Q Consensus 151 ~~~~fpll~Dp~~~ly-~alGv 171 (252)
.++|.-++.|++.++. +..|.
T Consensus 102 ~~~Pt~~~~d~~G~~~~~~~G~ 123 (164)
T 1sen_A 102 GYIPRILFLDPSGKVHPEIINE 123 (164)
T ss_dssp SCSSEEEEECTTSCBCTTCCCT
T ss_pred CcCCeEEEECCCCCEEEEEeCC
Confidence 2356668888876543 33443
No 152
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.11 E-value=1.1e-05 Score=62.35 Aligned_cols=44 Identities=11% Similarity=0.149 Sum_probs=36.4
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
+.++.+|++|++.||+.|+...+.|.++.+++ .++.++.|..+.
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~d~ 78 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEF--PTVKFAKVDADN 78 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHC--TTSEEEEEETTT
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHC--CCCEEEEEECCC
Confidence 45567777888999999999999999988877 368998888863
No 153
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.10 E-value=2.4e-06 Score=64.69 Aligned_cols=72 Identities=10% Similarity=-0.016 Sum_probs=51.4
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC-ce--eeecCChHHHHHcC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE--VYADPNHSSYEALS 170 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~-fp--ll~Dp~~~ly~alG 170 (252)
+.++.+|++|++.||+.|+...+.|.++.+++.. ++.++.|..+.... +++++++. +| ++.|.+..+.+..|
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~---~~~~~~v~~~Pt~~~~~~~~~~~~~~g 93 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQ---TCQKAGIKAYPSVKLYQYERAKKSIWE 93 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHH---HHHHTTCCSSSEEEEEEEEGGGTEEEE
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHH---HHHHcCCCccceEEEEeCCCccceeec
Confidence 4456777888899999999999999998888765 69999999886543 34445543 34 66666665443333
No 154
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.10 E-value=4.5e-07 Score=69.42 Aligned_cols=49 Identities=14% Similarity=0.062 Sum_probs=41.6
Q ss_pred cCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHH
Q 025474 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 94 ~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~ 142 (252)
++.++.+|++|++.||+.|+...+.|.++.+++...++.++.|..+...
T Consensus 30 l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~ 78 (121)
T 2j23_A 30 TGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQS 78 (121)
T ss_dssp HSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCH
T ss_pred HcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCH
Confidence 3456677778889999999999999999988888778999999998653
No 155
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.09 E-value=3.5e-06 Score=64.55 Aligned_cols=66 Identities=11% Similarity=0.051 Sum_probs=47.9
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh---CCCEEEEEeCCCHHHHHHHHHHhC---CCceeeecCCh
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPNH 163 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~---~Gv~vV~Vs~~~~~~~~~f~e~~~---~~fpll~Dp~~ 163 (252)
+.++.+|++|++.||+.|+...+.|.++.+++.+ .++.++.|..+.... ++++++ +|--++.|...
T Consensus 23 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~v~~~Pt~~~~~~g~ 94 (133)
T 1x5d_A 23 DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQV---LASRYGIRGFPTIKIFQKGE 94 (133)
T ss_dssp TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCH---HHHHHTCCSSSEEEEEETTE
T ss_pred cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHH---HHHhCCCCeeCeEEEEeCCC
Confidence 3456788888999999999999999999888874 468888888875432 333334 44446666654
No 156
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.09 E-value=3e-06 Score=67.82 Aligned_cols=54 Identities=13% Similarity=0.157 Sum_probs=42.2
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
.++.+|+.|++.||++|+.+.+.|.++.+++.+. +.++.|..+... ++++++++
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~---~l~~~~~v 75 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTA---VYTQYFDI 75 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCC---HHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCH---HHHHHcCC
Confidence 4678888899999999999999999988877543 888888887543 34445555
No 157
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.05 E-value=2.4e-06 Score=63.74 Aligned_cols=54 Identities=17% Similarity=0.184 Sum_probs=41.2
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
++.+|++|++.||+.|+...+.|.++..+++..++.++.|..+.... +.+++++
T Consensus 21 ~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~v 74 (112)
T 3d6i_A 21 DKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSE---ISELFEI 74 (112)
T ss_dssp TCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHH---HHHHTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHH---HHHHcCC
Confidence 56777888899999999999999999888766789999999886432 3444454
No 158
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.03 E-value=6.8e-06 Score=62.76 Aligned_cols=53 Identities=8% Similarity=-0.039 Sum_probs=42.6
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
++ +|++|++.||+.|+...+.|.++.+++...++.++.|..+.... +++++++
T Consensus 23 ~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~v 75 (126)
T 1x5e_A 23 GD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPG---LSGRFII 75 (126)
T ss_dssp SE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHH---HHHHTTC
T ss_pred CC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHH---HHHHcCC
Confidence 45 67888899999999999999999988877789999999876533 4445554
No 159
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.02 E-value=2.3e-05 Score=66.37 Aligned_cols=46 Identities=15% Similarity=0.113 Sum_probs=38.4
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~ 141 (252)
+.++.+|+.|++.||++|+...+.|.++.+++... +.++.|..+..
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~ 73 (222)
T 3dxb_A 28 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQN 73 (222)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTC
T ss_pred hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCCC
Confidence 45677788888999999999999999999888643 88999988754
No 160
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.02 E-value=7.6e-06 Score=61.70 Aligned_cols=60 Identities=15% Similarity=0.052 Sum_probs=44.0
Q ss_pred EecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh----CCCEEEEEeCCC
Q 025474 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGS 140 (252)
Q Consensus 80 l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~----~Gv~vV~Vs~~~ 140 (252)
+.+.+++.+...- ...++.+|+.|++.||+.|+...+.|.++..++.. .++.++.|..+.
T Consensus 9 v~~l~~~~f~~~v-~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~ 72 (121)
T 2djj_A 9 VTVVVAKNYNEIV-LDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA 72 (121)
T ss_dssp SEECCTTTTTTSS-SCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT
T ss_pred eEEecccCHHHHh-hcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc
Confidence 4455555543221 23456777888899999999999999999998875 368888888764
No 161
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.98 E-value=3.9e-06 Score=61.24 Aligned_cols=45 Identities=18% Similarity=0.136 Sum_probs=37.3
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHH
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~ 142 (252)
.++.++++|++.||+.|+...+.|.++.+++. ++.++.|..+...
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~ 62 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNE 62 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCH
Confidence 45567777779999999999999999887764 7999999988653
No 162
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.94 E-value=7.1e-06 Score=69.18 Aligned_cols=68 Identities=12% Similarity=0.174 Sum_probs=50.1
Q ss_pred ecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCC--CEEEEEeCCCHHHHHHHHHHhCC
Q 025474 81 YDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 81 ~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~G--v~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
.+.+++.+. ++..+++.+++.|++.||+.|+...+.|.++.++++..+ +.++.|..+... ++++++++
T Consensus 18 ~~l~~~~~~--~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~v 87 (241)
T 3idv_A 18 LVLNDANFD--NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSAS---VLASRFDV 87 (241)
T ss_dssp EEECTTTHH--HHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCH---HHHHHTTC
T ss_pred EEecccCHH--HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCH---HHHHhcCC
Confidence 333444333 334567788999999999999999999999999998776 888888887543 34445554
No 163
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.92 E-value=1e-05 Score=59.08 Aligned_cols=54 Identities=11% Similarity=0.082 Sum_probs=40.0
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
.++.+|++|++.||+.|+...+.|.+..+++.. .+.++.|..+... ++++++++
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~---~~~~~~~v 70 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEAP---GIATQYNI 70 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH---HHHHHTTC
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcchH---HHHHhCCC
Confidence 345666777799999999999999998887754 4889999887543 23344444
No 164
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.92 E-value=5e-06 Score=60.92 Aligned_cols=46 Identities=13% Similarity=0.184 Sum_probs=37.6
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~ 143 (252)
+++.+|++|++.||+.|+...+.+.++.+++. ++.++.|..+....
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~ 64 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDDCQD 64 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTTCHH
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhhhHH
Confidence 45667777789999999999999999888774 49999999876543
No 165
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.91 E-value=2.8e-05 Score=58.67 Aligned_cols=57 Identities=16% Similarity=0.256 Sum_probs=40.8
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH---HHHHHHHHHhCCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKFK 154 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~---~~~~~f~e~~~~~ 154 (252)
+.++.+|++|++.|||+|+...+.|.++.+++ +.+++.|..+.. +...++++++++.
T Consensus 27 ~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~i~ 86 (118)
T 1zma_A 27 DKKETATFFIGRKTCPYCRKFAGTLSGVVAET---KAHIYFINSEEPSQLNDLQAFRSRYGIP 86 (118)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCCEEEETTCGGGHHHHHHHHHHHTCC
T ss_pred hCCCeEEEEEECCCCccHHHHHHHHHHHHHhc---CCeEEEEECCCcCcHHHHHHHHHHcCCC
Confidence 34566788889999999999999999887755 356777766543 3445566666653
No 166
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.90 E-value=2.8e-06 Score=66.37 Aligned_cols=52 Identities=19% Similarity=0.267 Sum_probs=39.1
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
+++.+|++|++.||+.|+...+.|.++..++ ++.++.|..+.... +++++++
T Consensus 39 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~~---l~~~~~v 90 (133)
T 3cxg_A 39 QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHPK---LNDQHNI 90 (133)
T ss_dssp CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCHH---HHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchHH---HHHhcCC
Confidence 3567888889999999999999998876655 68888888775433 3344444
No 167
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.89 E-value=3.1e-05 Score=59.27 Aligned_cols=55 Identities=7% Similarity=-0.129 Sum_probs=41.4
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh----CCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~----~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
.++.+|+.|++.||++|+...+.+.++..++.. .++.++.|..+... ++++++++
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~v 90 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP---DVIERMRV 90 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH---HHHHHTTC
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH---hHHHhcCC
Confidence 467788888999999999999999999887753 34778888877543 33444444
No 168
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.87 E-value=1.8e-05 Score=61.64 Aligned_cols=53 Identities=19% Similarity=0.225 Sum_probs=41.0
Q ss_pred EEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH------HHHHHHHHHhCCC
Q 025474 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV------EQARTFSEQTKFK 154 (252)
Q Consensus 99 vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~------~~~~~f~e~~~~~ 154 (252)
.+|++|++.||++|+...+.|.++.+++. +.++.|..++. +...++++++++.
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~ 91 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAARLEMNKAGVE 91 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHHHHHHHHHTCC
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhhHHHHHHcCCc
Confidence 67778899999999999999998887663 88999988543 3445566666653
No 169
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.07 E-value=2.1e-06 Score=62.59 Aligned_cols=46 Identities=20% Similarity=0.156 Sum_probs=35.8
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~ 141 (252)
+.++.++++|++.|||.|+...+.+.+..+++.. ++.++.|..+..
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 62 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDEN 62 (106)
Confidence 3456677777899999999999999988887754 577777776643
No 170
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.85 E-value=2.2e-05 Score=62.45 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=44.3
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhC---CCceeeec
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYAD 160 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~---~~fpll~D 160 (252)
++.+|++|++.||+.|+...+.|.++..++ .++.++.|..+.... ++++++ +|.-++.|
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~~~~~~---l~~~~~v~~~Pt~~~~~ 93 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKEL--PQVSFVKLEAEGVPE---VSEKYEISSVPTFLFFK 93 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHH---HHHHTTCCSSSEEEEEE
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHc--CCeEEEEEECCCCHH---HHHHcCCCCCCEEEEEE
Confidence 567777888999999999999999988776 479999999886543 334444 44335566
No 171
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.85 E-value=1.9e-06 Score=69.39 Aligned_cols=58 Identities=16% Similarity=0.145 Sum_probs=43.4
Q ss_pred CccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 92 DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 92 ~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
++.+.++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+.... +.+++++
T Consensus 59 ~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~~~---l~~~~~i 116 (155)
T 2ppt_A 59 RAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAHPA---VAGRHRI 116 (155)
T ss_dssp HHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTSTH---HHHHTTC
T ss_pred HHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCccHH---HHHHcCC
Confidence 3334556677777899999999999999999888864 49999999876432 3444454
No 172
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.83 E-value=1.1e-05 Score=59.08 Aligned_cols=48 Identities=8% Similarity=0.082 Sum_probs=39.2
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~ 143 (252)
..++.+|++|++.||+.|+...+.|.++..++.. .+.++.|..+....
T Consensus 19 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~ 66 (109)
T 3tco_A 19 RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDENQK 66 (109)
T ss_dssp HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHH
T ss_pred hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccCHH
Confidence 3467778888899999999999999999888754 58899998876543
No 173
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.83 E-value=1.1e-05 Score=59.64 Aligned_cols=53 Identities=9% Similarity=0.142 Sum_probs=41.1
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
.++.+|++|++.||+.|+...+.|.++.+++ .++.++.|..+.... +.+++++
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~---~~~~~~v 72 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY--PQAVFLEVDVHQCQG---TAATNNI 72 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHH---HHHHTTC
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHC--CCcEEEEEECccCHH---HHHhcCC
Confidence 4566777888999999999999999988877 469999999886433 3444554
No 174
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.82 E-value=3.4e-05 Score=59.09 Aligned_cols=44 Identities=14% Similarity=0.226 Sum_probs=36.7
Q ss_pred CcEEEEEEcCC-------CCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH
Q 025474 97 RKAVVAFARHF-------GCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 97 ~~vvlvF~R~~-------~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~ 141 (252)
++.+++.|++. ||+.|+...+.|.++.+++.+ ++.++.|..++.
T Consensus 24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~ 74 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEK 74 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCH
T ss_pred CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCc
Confidence 56778888899 999999999999998777643 688999988754
No 175
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.80 E-value=6.8e-06 Score=60.65 Aligned_cols=54 Identities=9% Similarity=0.005 Sum_probs=40.4
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhC--CCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS--GVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~--Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
++.+|++|++.||+.|+...+.|.++.+++... ++.++.|..+.... +++++++
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~v 76 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN---ICSKYSV 76 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH---HHHHTTC
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh---HHHhcCC
Confidence 456777888999999999999999988776543 68888888875433 3445454
No 176
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.79 E-value=4.2e-05 Score=56.39 Aligned_cols=55 Identities=11% Similarity=0.220 Sum_probs=41.8
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
+.++.+|++|++.||+.|+...+.|.++..++.+ .+.++.|..+.... +++++++
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~---l~~~~~v 74 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEKT---LFQRFSL 74 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHH---HHHHTTC
T ss_pred hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcChh---HHHhcCC
Confidence 3456677777899999999999999998887754 58999999886543 3445454
No 177
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.78 E-value=5e-06 Score=64.76 Aligned_cols=54 Identities=15% Similarity=0.042 Sum_probs=42.8
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
++.+|++|++.||+.|+...+.|.++..++...++.++.|..+... ++++++++
T Consensus 26 ~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~---~~~~~~~v 79 (137)
T 2dj0_A 26 RVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYT---DVSTRYKV 79 (137)
T ss_dssp TSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCH---HHHHHTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCH---HHHHHccC
Confidence 3467788899999999999999999998887667999999887543 34455555
No 178
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.74 E-value=5.1e-05 Score=64.88 Aligned_cols=65 Identities=12% Similarity=0.009 Sum_probs=48.4
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh--CCCEEEEEeCCCHHHHHHHHHHhCCC-ce--eeecC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVEQARTFSEQTKFK-GE--VYADP 161 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~--~Gv~vV~Vs~~~~~~~~~f~e~~~~~-fp--ll~Dp 161 (252)
.++.+|+.|++.||+.|+...+.+.++.+++.+ .++.++.|.++.. ...+.++++++. +| ++.++
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~-~~~~l~~~~~v~~~Pt~~~~~~ 98 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEE-TNSAVCRDFNIPGFPTVRFFXA 98 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTST-TTHHHHHHTTCCSSSEEEEECT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCch-hhHHHHHHcCCCccCEEEEEeC
Confidence 457888888999999999999999999999876 4789999998432 223445555543 33 66665
No 179
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.74 E-value=2e-05 Score=59.24 Aligned_cols=54 Identities=11% Similarity=0.083 Sum_probs=41.0
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
.++.+|++|++.||+.|+...+.|.++.+++.. ++.++.|..+.... +++++++
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~---~~~~~~i 82 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTNPE---TARNFQV 82 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHH---HHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCCHH---HHHhcCC
Confidence 455677777899999999999999998887754 58999999875432 3444454
No 180
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.73 E-value=0.00015 Score=50.19 Aligned_cols=35 Identities=11% Similarity=0.101 Sum_probs=26.0
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEE
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~V 136 (252)
.+.|++.||+.|+...+.|.++..++. ..+.++.|
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~~v 37 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELG-IDAEFEKI 37 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTT-CCEEEEEE
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcC-CceEEEEe
Confidence 456778999999999999988877653 23555544
No 181
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.72 E-value=1e-05 Score=70.49 Aligned_cols=53 Identities=9% Similarity=0.071 Sum_probs=42.2
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
++.|||.|+++||++|+...+.|.++..++.. .+.++.|..+... ++.+++++
T Consensus 26 ~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~---~~~~~~~v 78 (287)
T 3qou_A 26 TTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQ---MIAAQFGL 78 (287)
T ss_dssp TSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCH---HHHHTTTC
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCH---HHHHHcCC
Confidence 67788888999999999999999999888864 4999999988643 33444444
No 182
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.71 E-value=5e-05 Score=60.10 Aligned_cols=45 Identities=18% Similarity=0.117 Sum_probs=37.6
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~ 141 (252)
.++.+|+.|++.||++|+...+.|.++.+++.. ++.++.|..+..
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~ 66 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEV 66 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccC
Confidence 356788888999999999999999999888744 488888888753
No 183
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.67 E-value=6.3e-05 Score=60.75 Aligned_cols=50 Identities=20% Similarity=0.256 Sum_probs=37.2
Q ss_pred CCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe
Q 025474 84 NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 84 ~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs 137 (252)
++..+.+++- +.++.|+.|+.+|||+|+...+.|.++..+..+ ++++.+.
T Consensus 11 ~~~~~~~G~~--~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~ 60 (175)
T 3gyk_A 11 DPNAPVLGNP--EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYRE 60 (175)
T ss_dssp CTTSCEEECT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEE
T ss_pred CCCCCCcCCC--CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEe
Confidence 3445556654 678999999999999999999999887766432 5655554
No 184
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.61 E-value=3.6e-05 Score=59.94 Aligned_cols=53 Identities=9% Similarity=-0.007 Sum_probs=40.9
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
.++ +|++|++.||+.|+...+.|.++.+++.. ++.++.|..+... .+.+++++
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~---~l~~~~~v 102 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEHP---GLAARYGV 102 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCH---HHHHHTTC
T ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCCH---HHHHHCCC
Confidence 445 78888899999999999999998888764 5889999887643 34445554
No 185
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.77 E-value=8.4e-06 Score=62.45 Aligned_cols=74 Identities=9% Similarity=0.279 Sum_probs=47.2
Q ss_pred CCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHH---HHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHh---CCCceee
Q 025474 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSVEQARTFSEQT---KFKGEVY 158 (252)
Q Consensus 85 G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~---~~~fpll 158 (252)
.+.+.+... .++.+|++|++.||++|+...+.| .++.+.+.. ++.++.|..++. ...++.+++ ++|.-++
T Consensus 9 ~~~~~~~~~--~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~~~~~~~~~v~~~Pt~~~ 84 (130)
T 2lst_A 9 PEALALAQA--HGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTP-EGQELARRYRVPGTPTFVF 84 (130)
Confidence 445555443 556777888899999999999988 666665543 577777777432 222333333 3454577
Q ss_pred ecCC
Q 025474 159 ADPN 162 (252)
Q Consensus 159 ~Dp~ 162 (252)
.|++
T Consensus 85 ~d~~ 88 (130)
T 2lst_A 85 LVPK 88 (130)
Confidence 7753
No 186
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.59 E-value=1.5e-05 Score=66.79 Aligned_cols=55 Identities=11% Similarity=0.079 Sum_probs=42.5
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
.++.+|++|++.||+.|+...+.+.++..++.. .+.++.|..+... .+++++++.
T Consensus 113 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~---~l~~~~~v~ 167 (210)
T 3apq_A 113 SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDR---MLCRMKGVN 167 (210)
T ss_dssp HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCH---HHHHHTTCC
T ss_pred cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccH---HHHHHcCCC
Confidence 456778888999999999999999998888754 4899999987653 344455543
No 187
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.55 E-value=9.1e-05 Score=65.95 Aligned_cols=66 Identities=9% Similarity=0.088 Sum_probs=48.4
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC-ce--eeecCCh
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE--VYADPNH 163 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~-fp--ll~Dp~~ 163 (252)
.++.+|+.|++.||+.|+..++.+.++..++... +.++.|.++..+ ..++++++++. +| ++.+.+.
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~~-~~~l~~~~~I~~~Pt~~~~~~g~ 102 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLNK-NKALCAKYDVNGFPTLMVFRPPK 102 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTSTT-THHHHHHTTCCBSSEEEEEECCC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCcc-CHHHHHhCCCCccceEEEEECCc
Confidence 4567788888999999999999999999888654 899999987421 23455566654 44 5555554
No 188
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.53 E-value=2.3e-05 Score=58.69 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=35.2
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~ 141 (252)
+++.+|++|++.||+.|+...+.|.++..++. ++.++.|..+..
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~ 61 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEAR 61 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGC
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCC
Confidence 44567777889999999999999988777654 688888887643
No 189
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.48 E-value=4e-05 Score=53.84 Aligned_cols=40 Identities=10% Similarity=0.129 Sum_probs=32.7
Q ss_pred EEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 99 vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+.|++|++.|||+|+...+.|.++..++. .++.++.|..+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~ 42 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFG-DKIDVEKIDIM 42 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHC-SSCCEEEECTT
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhc-CCeEEEEEECC
Confidence 35677899999999999999998877764 36888888775
No 190
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.46 E-value=0.00023 Score=54.55 Aligned_cols=44 Identities=16% Similarity=0.124 Sum_probs=31.5
Q ss_pred CCCcEEEEEEcCCCCH--------------hHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 95 KDRKAVVAFARHFGCV--------------LCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp--------------~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+.++.+|+.|++.||+ .|+...+.+.++.+++.. ++.++.|..+
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d 76 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNID 76 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETT
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECC
Confidence 4567778888999999 999999999998887754 4888888765
No 191
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.46 E-value=0.00021 Score=68.66 Aligned_cols=66 Identities=6% Similarity=-0.072 Sum_probs=50.1
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh--CCCEEEEEeCCCHHHHHHHHHHhCCC-ce--eeecC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVEQARTFSEQTKFK-GE--VYADP 161 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~--~Gv~vV~Vs~~~~~~~~~f~e~~~~~-fp--ll~Dp 161 (252)
+.++.+||.|++.||++|+..++.+.++.++++. .++.++.|.++.. ...++++++++. +| ++.|+
T Consensus 28 ~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d-~~~~l~~~~~V~~~PTl~~f~~ 98 (519)
T 3t58_A 28 GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEE-TNSAVCREFNIAGFPTVRFFQA 98 (519)
T ss_dssp SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSG-GGHHHHHHTTCCSBSEEEEECT
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcc-ccHHHHHHcCCcccCEEEEEcC
Confidence 3457888899999999999999999999999976 3688999998642 234455666654 44 66664
No 192
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.37 E-value=0.00026 Score=55.18 Aligned_cols=43 Identities=14% Similarity=0.006 Sum_probs=35.4
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~ 141 (252)
++.+|+.|++.||+.|+...+.|.++..++ .++.++.|..+..
T Consensus 30 ~~~vvv~f~a~wC~~C~~~~p~l~~la~~~--~~v~~~~vd~~~~ 72 (135)
T 2dbc_A 30 DLWVVIHLYRSSVPMCLVVNQHLSVLARKF--PETKFVKAIVNSC 72 (135)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHC--SSEEEEEECCSSS
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHC--CCcEEEEEEhhcC
Confidence 357888899999999999999999988776 3578888877653
No 193
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=97.33 E-value=0.00021 Score=59.13 Aligned_cols=70 Identities=10% Similarity=0.180 Sum_probs=45.9
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHH---HHcHHHHHhCCCEEEEEeCCCH-HHHHHHH-------HHhCCCceeeecCChH
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV-EQARTFS-------EQTKFKGEVYADPNHS 164 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~vV~Vs~~~~-~~~~~f~-------e~~~~~fpll~Dp~~~ 164 (252)
+++.||+.|++.||+.|+...++. .+..+.+.+ ++.+|-|..+.. +-.+.|. ...++|.-++.|++.+
T Consensus 38 ~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 38 ENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKK 116 (173)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTSC
T ss_pred hCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECCCCC
Confidence 356677778899999999977632 223333433 577777777754 3334453 3457888899998876
Q ss_pred HH
Q 025474 165 SY 166 (252)
Q Consensus 165 ly 166 (252)
..
T Consensus 117 ~v 118 (173)
T 3ira_A 117 PF 118 (173)
T ss_dssp EE
T ss_pred ce
Confidence 53
No 194
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.31 E-value=0.0003 Score=66.90 Aligned_cols=62 Identities=13% Similarity=0.199 Sum_probs=45.9
Q ss_pred cEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhC-C------CEEEEEeCCCHHHHHHHHHHhCCC-ce--eeecCC
Q 025474 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-G------VALVLIGPGSVEQARTFSEQTKFK-GE--VYADPN 162 (252)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~-G------v~vV~Vs~~~~~~~~~f~e~~~~~-fp--ll~Dp~ 162 (252)
+++||.|++.||++|+...+.+.++..++.+. | +.++.|..+... ++++++++. +| ++.+++
T Consensus 43 k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~---~la~~y~V~~~PTlilf~~g 114 (470)
T 3qcp_A 43 CPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV---DLCRKYDINFVPRLFFFYPR 114 (470)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH---HHHHHTTCCSSCEEEEEEES
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH---HHHHHcCCCccCeEEEEECC
Confidence 56788889999999999999999999888643 3 899999988653 344555543 34 445443
No 195
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.30 E-value=0.00034 Score=58.39 Aligned_cols=55 Identities=7% Similarity=0.018 Sum_probs=42.1
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh---CCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~---~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
+++++++.|++.||++|+...+.+.++..++.. .++.++.|..+... ++++++++
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~v 190 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYP---EWADQYNV 190 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCH---HHHHHTTC
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCH---HHHHhCCC
Confidence 467768888999999999999999999988874 36888888776432 23445554
No 196
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.29 E-value=0.00013 Score=51.11 Aligned_cols=41 Identities=15% Similarity=0.159 Sum_probs=33.7
Q ss_pred cEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
.+.|++|++.|||+|++..+.|.++..++. .++.++.|..+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~ 43 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVM 43 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-CceEEEEEECC
Confidence 356778889999999999999998877764 36888888875
No 197
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.27 E-value=1e-05 Score=61.35 Aligned_cols=30 Identities=17% Similarity=0.326 Sum_probs=24.6
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHH
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVM 126 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l 126 (252)
++.+|+.|+++||+.|+...+.|.++..++
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhC
Confidence 345567788999999999999999887655
No 198
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.27 E-value=0.00029 Score=59.47 Aligned_cols=38 Identities=18% Similarity=0.394 Sum_probs=31.1
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs 137 (252)
+++++|+.|+.+|||+|++..+.|.++.+ .|++++.+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~ 122 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNA----LGITVRYLA 122 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHH----TTEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHh----CCcEEEEEE
Confidence 46788888899999999999999887543 378888764
No 199
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.24 E-value=1.4e-05 Score=60.93 Aligned_cols=43 Identities=19% Similarity=0.188 Sum_probs=36.0
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~ 141 (252)
++.+|++|+..||+.|+...+.|.++.+++. ++.++.|..+..
T Consensus 36 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~ 78 (130)
T 1wmj_A 36 GKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDEL 78 (130)
T ss_dssp TCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTS
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccch
Confidence 5567778889999999999999999888774 788888888754
No 200
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.23 E-value=0.00046 Score=56.59 Aligned_cols=55 Identities=18% Similarity=0.108 Sum_probs=42.3
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
..++||+.|++.||++|+...+-|.++.+++.. .+.++-|..|.. .++.+++++.
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~---~e~a~~y~V~ 94 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV---PDFNTMYELY 94 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC---CTTTTTTTCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC---HHHHHHcCCC
Confidence 456788899999999999999999999988743 377888887754 3355555554
No 201
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.23 E-value=8.3e-05 Score=55.17 Aligned_cols=46 Identities=15% Similarity=0.123 Sum_probs=37.1
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhC--CCEEEEEeCCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS--GVALVLIGPGS 140 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~--Gv~vV~Vs~~~ 140 (252)
++++.+|++|++.||+.|++..+.|.+..+++.+. ++.++.|..+.
T Consensus 22 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~ 69 (120)
T 1mek_A 22 AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE 69 (120)
T ss_dssp HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT
T ss_pred ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC
Confidence 34667888888999999999999999998888764 46677777654
No 202
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=97.20 E-value=9.4e-05 Score=59.85 Aligned_cols=75 Identities=8% Similarity=0.144 Sum_probs=43.6
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHH--HHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeeecCChH-HHHHcCCc
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKD--VMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHS-SYEALSFV 172 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~--~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll~Dp~~~-ly~alGv~ 172 (252)
++.||+.|++.||++|+...+.+.+..+ ++.+.++..|-|..++.+....| .-.++|--++.|++.+ +++..|..
T Consensus 44 ~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~-~v~~~PT~~f~~~~G~~v~~~~G~~ 121 (151)
T 3ph9_A 44 KKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSP-DGQYVPRIMFVDPSLTVRADIAGRY 121 (151)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCT-TCCCSSEEEEECTTSCBCTTCCCSC
T ss_pred CCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhc-CCCCCCEEEEECCCCCEEEEEeCCc
Confidence 5567777789999999999999887522 22223444444432222222222 1234555588896554 45555653
No 203
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.17 E-value=0.00029 Score=66.46 Aligned_cols=61 Identities=11% Similarity=0.073 Sum_probs=48.9
Q ss_pred ccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC-ce
Q 025474 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE 156 (252)
Q Consensus 93 l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~-fp 156 (252)
+.+.++.+|+.|++.||+.|+...+.+.++..++...++.++.|.++.. ..+++++++. +|
T Consensus 27 ~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~P 88 (504)
T 2b5e_A 27 YIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTEN---QDLCMEHNIPGFP 88 (504)
T ss_dssp HHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTC---HHHHHHTTCCSSS
T ss_pred HHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCC---HHHHHhcCCCcCC
Confidence 3445678888889999999999999999999998877899999998865 3455566654 44
No 204
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.10 E-value=0.00099 Score=60.80 Aligned_cols=59 Identities=7% Similarity=0.075 Sum_probs=45.1
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh-----CCCEEEEEeCCCHHHHHHHHHHhCCC-ce
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-----SGVALVLIGPGSVEQARTFSEQTKFK-GE 156 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~-----~Gv~vV~Vs~~~~~~~~~f~e~~~~~-fp 156 (252)
++++.+||.|++.||+.|+..++.+.++..++++ .++.++.|.++.. ...++++++. +|
T Consensus 20 ~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~---~~l~~~~~v~~~P 84 (382)
T 2r2j_A 20 NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH---SDIAQRYRISKYP 84 (382)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC---HHHHHHTTCCEES
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc---HHHHHhcCCCcCC
Confidence 4456788888999999999999999999988863 3488888888754 3355566654 44
No 205
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.09 E-value=0.00067 Score=58.40 Aligned_cols=61 Identities=3% Similarity=-0.100 Sum_probs=45.0
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh---CCCEEEEEeCCCHHHHHHHHHHhCC-Cce-eee
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVEQARTFSEQTKF-KGE-VYA 159 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~---~Gv~vV~Vs~~~~~~~~~f~e~~~~-~fp-ll~ 159 (252)
+++++|+.|++.|||+|+..++.|.++..++.. .++.+..|..+.... .++++++ .+| ++.
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~V~~vPt~~i 202 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPD---IADKYGVMSVPSIAI 202 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHH---HHHHTTCCSSSEEEE
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHH---HHHHcCCeeeCeEEE
Confidence 467888889999999999999999999888743 578888887765432 3344554 355 444
No 206
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.08 E-value=0.00056 Score=57.32 Aligned_cols=57 Identities=11% Similarity=0.149 Sum_probs=44.2
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCC--CEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~G--v~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
..++.++++|++.||+.|+...+.+.++..++...+ +.++.|..+... ++++++++.
T Consensus 145 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~---~l~~~~~v~ 203 (241)
T 3idv_A 145 NDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAET---DLAKRFDVS 203 (241)
T ss_dssp HHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCH---HHHHHTTCC
T ss_pred ccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCH---HHHHHcCCc
Confidence 345678888899999999999999999999988665 888888877543 344555543
No 207
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=96.97 E-value=0.0011 Score=54.31 Aligned_cols=43 Identities=14% Similarity=0.080 Sum_probs=34.1
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+++++|+.|+.+|||+|+...+.|.++.+++.. ++.++-+...
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 467888888999999999999999888776654 5666666654
No 208
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=96.91 E-value=0.00098 Score=55.84 Aligned_cols=56 Identities=13% Similarity=0.008 Sum_probs=42.7
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC-ce
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE 156 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~-fp 156 (252)
+++++|+.|++.||++|+...+.+.++..++ .++.++.|..+... +.++++++. +|
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~--~~v~~~~vd~~~~~---~l~~~~~v~~~P 191 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN--DYITSKVIDASENQ---DLAEQFQVVGVP 191 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC--TTEEEEEEEGGGCH---HHHHHTTCCSSS
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC--CCeEEEEEECCCCH---HHHHHcCCcccC
Confidence 4678788889999999999999999988776 36888888876432 344556654 55
No 209
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.89 E-value=0.00065 Score=52.51 Aligned_cols=44 Identities=9% Similarity=0.012 Sum_probs=32.2
Q ss_pred ccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 93 l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+.+..+.+++||.++||++|+.-.+.|.+..++ .++.++-|-.+
T Consensus 20 ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~---~~v~~~~vdVd 63 (112)
T 3iv4_A 20 VIEENKYVFVLKHSETCPISANAYDQFNKFLYE---RDMDGYYLIVQ 63 (112)
T ss_dssp HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGG
T ss_pred HHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc---CCceEEEEEee
Confidence 333467888999999999999999999887652 34555555443
No 210
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=96.88 E-value=0.00031 Score=63.26 Aligned_cols=56 Identities=9% Similarity=0.176 Sum_probs=42.2
Q ss_pred cCCCcEEEEEEcCCCCHhHHHHHHH-------HHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 94 WKDRKAVVAFARHFGCVLCRKRADY-------LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 94 ~~~~~vvlvF~R~~~Cp~C~~el~~-------L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
.+.++.+||.|++.||+ |+..++. +.+...+++..++.++.|.++.... .++++++
T Consensus 25 i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~---l~~~~~v 87 (350)
T 1sji_A 25 LKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAK---LAKKLGF 87 (350)
T ss_dssp HTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHH---HHHHHTC
T ss_pred HhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHH---HHHhcCC
Confidence 34567888889999999 9888888 7777777777789999998876533 3444454
No 211
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=96.85 E-value=0.0017 Score=60.70 Aligned_cols=53 Identities=9% Similarity=-0.027 Sum_probs=42.8
Q ss_pred cEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
+.+|+.|++.||+.|+...+.+.+...++... +.++.|.++... ..++++++.
T Consensus 22 ~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~---~l~~~~~v~ 74 (481)
T 3f8u_A 22 GLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANT---NTCNKYGVS 74 (481)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCH---HHHHHTTCC
T ss_pred CeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCH---HHHHhcCCC
Confidence 78888889999999999999999999888765 888888887643 344555654
No 212
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=96.85 E-value=0.0003 Score=55.98 Aligned_cols=58 Identities=7% Similarity=-0.028 Sum_probs=33.4
Q ss_pred CccCCCcEEEEEEcCCC--CHhHHHHHHHHHHcHHHHHhCCCE--EEEEeCCCHHHHHHHHHHhCCC
Q 025474 92 DLWKDRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDASGVA--LVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 92 ~l~~~~~vvlvF~R~~~--Cp~C~~el~~L~~~~~~l~~~Gv~--vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
++....+.+|++|.+.| |+.|+..++.|.++.+++ .++. ++.|..+.. .+.++++++.
T Consensus 29 ~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~--~~v~~~~~~Vd~d~~---~~la~~~~V~ 90 (142)
T 2es7_A 29 DWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF--PQFDWQVAVADLEQS---EAIGDRFNVR 90 (142)
T ss_dssp -----CCSEEEEECCCSCC----CCHHHHHHHHHHTC--TTSCCEEEEECHHHH---HHHHHTTTCC
T ss_pred HHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh--cccceeEEEEECCCC---HHHHHhcCCC
Confidence 33333333555666666 999999999999998888 3577 888876643 3445555543
No 213
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=96.84 E-value=0.0011 Score=61.86 Aligned_cols=45 Identities=9% Similarity=0.136 Sum_probs=37.8
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhC-CCEEEEEeCCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGS 140 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~-Gv~vV~Vs~~~ 140 (252)
.++.+|++|++.||++|+..++.|.++.+++... ++.++.|..+.
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~ 414 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA 414 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc
Confidence 3677888899999999999999999999988765 67777777664
No 214
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=96.77 E-value=0.00093 Score=58.20 Aligned_cols=42 Identities=14% Similarity=0.053 Sum_probs=35.6
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
++.|||.|++.||+.|+...+.|.++..++. ++.++.|..+.
T Consensus 133 ~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~ 174 (245)
T 1a0r_P 133 ITTIVVHIYEDGIKGCDALNSSLICLAAEYP--MVKFCKIKASN 174 (245)
T ss_dssp TCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHH
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCc
Confidence 5678888899999999999999999888774 58888887653
No 215
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=96.75 E-value=0.0018 Score=58.06 Aligned_cols=45 Identities=11% Similarity=0.156 Sum_probs=35.9
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhC-CCEEEEEeCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPG 139 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~-Gv~vV~Vs~~ 139 (252)
..++.+++.|++.||+.|+..++.|.++..+++.. ++.++.|..+
T Consensus 265 ~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~ 310 (361)
T 3uem_A 265 DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST 310 (361)
T ss_dssp CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT
T ss_pred cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECC
Confidence 35677888889999999999999999999988765 4566655544
No 216
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.72 E-value=0.0016 Score=45.77 Aligned_cols=56 Identities=7% Similarity=0.091 Sum_probs=38.8
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHH-HHHHHHHHhC---CCceee
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE-QARTFSEQTK---FKGEVY 158 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~-~~~~f~e~~~---~~fpll 158 (252)
|+.|...|||+|+...+.|.++..+. .|+.+..|..+... ..+++.++++ ..+|.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i 62 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER--DDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI 62 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH--SSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC--CCceEEEEecccChHHHHHHHHHhCCCCceeCeE
Confidence 45678999999999999888876543 57888888765321 1245666666 457743
No 217
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.70 E-value=0.0045 Score=43.17 Aligned_cols=53 Identities=17% Similarity=0.271 Sum_probs=35.4
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC-ceeeec
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GEVYAD 160 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~-fpll~D 160 (252)
|++|...|||+|++..+.|. +.|+.+..|..+......++.++++.. .|.+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~-------~~~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~~ 56 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAME-------NRGFDFEMINVDRVPEAAEALRAQGFRQLPVVIA 56 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTCHHHHHHHHHTTCCSSCEEEE
T ss_pred EEEEcCCCChhHHHHHHHHH-------HCCCCeEEEECCCCHHHHHHHHHhCCCccCEEEE
Confidence 45678999999998766654 457888888887544444444455653 675544
No 218
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.62 E-value=0.0018 Score=45.52 Aligned_cols=53 Identities=21% Similarity=0.261 Sum_probs=32.6
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC-ce
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE 156 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~-fp 156 (252)
+++|.+.|||+|+...+.|.++. ++.|+.+..+..+......+..++++.. .|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vP 57 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAI---DPSKYTVEIVHLGTDKARIAEAEKAGVKSVP 57 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHS---CTTTEEEEEEETTTCSSTHHHHHHHTCCEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHH---HhcCCeEEEEEecCChhhHHHHHHcCCCcCC
Confidence 45567899999999999887754 3456666666655310112233455653 56
No 219
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=96.60 E-value=0.0021 Score=47.92 Aligned_cols=57 Identities=14% Similarity=0.053 Sum_probs=34.9
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH-H-HHHHHHHHhCC-Cceee
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-E-QARTFSEQTKF-KGEVY 158 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~-~-~~~~f~e~~~~-~fpll 158 (252)
++++ |++ |++.|||+|+...+.|.+...+ +.++-|..+.. . ....+.+++++ .+|.+
T Consensus 18 ~~~~-vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~ 77 (116)
T 2e7p_A 18 SSAP-VVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDELSDGSQLQSALAHWTGRGTVPNV 77 (116)
T ss_dssp TSSS-EEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred cCCC-EEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCCCChHHHHHHHHHHhCCCCcCEE
Confidence 3444 444 7899999999999888775322 35555554432 2 22446666676 36633
No 220
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.54 E-value=0.007 Score=41.22 Aligned_cols=53 Identities=17% Similarity=0.297 Sum_probs=36.5
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC-Cceeeec
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF-KGEVYAD 160 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~-~fpll~D 160 (252)
+++|...|||+|++....|.+ .|+.+..|..+......++.++++. ..|.+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~-------~~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~ 56 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDR-------AGLAYNTVDISLDDEARDYVMALGYVQAPVVEV 56 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHcCCCccCEEEE
Confidence 456788999999987776654 4777777777754444444456665 4786655
No 221
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.52 E-value=0.0015 Score=52.41 Aligned_cols=54 Identities=4% Similarity=-0.069 Sum_probs=39.5
Q ss_pred CCcEEEEEEcCCC--CHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 96 DRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vvlvF~R~~~--Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
++++ |+|||+.| |+.|+.-.+-|.++.+++..+.++++-|..| +..+...++++
T Consensus 34 ~~~v-lVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD---e~~~lA~~ygV 89 (140)
T 2qgv_A 34 APDG-VVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE---QSEAIGDRFGA 89 (140)
T ss_dssp CSSE-EEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH---HHHHHHHHHTC
T ss_pred CCCE-EEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC---CCHHHHHHcCC
Confidence 3455 45999999 9999999999999988885433777777665 44455556665
No 222
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.49 E-value=0.0062 Score=50.55 Aligned_cols=56 Identities=5% Similarity=0.176 Sum_probs=40.9
Q ss_pred CCcEEEEEEcCC-CCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 96 DRKAVVAFARHF-GCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 96 ~~~vvlvF~R~~-~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
+++++|++|... ||++|++..+.|.++.+. ..++.++.|..+.++. .+.++++++.
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~--~~~v~~~~vd~~~~~~-~~~~~~~~v~ 77 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL--TDKLSYEIVDFDTPEG-KELAKRYRID 77 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT--CTTEEEEEEETTSHHH-HHHHHHTTCC
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh--CCceEEEEEeCCCccc-HHHHHHcCCC
Confidence 568888889999 999999999999886543 3358888888886322 3455555543
No 223
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.48 E-value=0.0034 Score=62.30 Aligned_cols=47 Identities=9% Similarity=-0.116 Sum_probs=38.7
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~ 143 (252)
.++.+++.|++.||+.|+.+++.|.++..+++. .+.++.|..+....
T Consensus 454 ~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~ 500 (780)
T 3apo_A 454 DKEPWLVDFFAPWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEG 500 (780)
T ss_dssp CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHH
T ss_pred CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHH
Confidence 345677788899999999999999999998864 58899998876543
No 224
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=96.48 E-value=0.0042 Score=47.78 Aligned_cols=40 Identities=13% Similarity=-0.009 Sum_probs=33.8
Q ss_pred EEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC
Q 025474 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 99 vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
.||+.|++.||+.|+.-.+.|.++.+++. +++++-|..+.
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~ 64 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNS 64 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGG
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHH
Confidence 78888899999999999999999888763 58888887763
No 225
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.44 E-value=0.0018 Score=64.26 Aligned_cols=54 Identities=7% Similarity=-0.123 Sum_probs=41.7
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
.++.+|+.|++.||+.|+..++.+.++..+++. ++.++.|..+.... +++++++
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~~~---~~~~~~v 727 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAYPQ---TCQKAGI 727 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHH---HHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCCHH---HHHhcCC
Confidence 456677778899999999999999999888854 68899998876443 3444444
No 226
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.43 E-value=0.0031 Score=46.80 Aligned_cols=69 Identities=20% Similarity=0.219 Sum_probs=42.1
Q ss_pred CCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCce-eeec
Q 025474 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGE-VYAD 160 (252)
Q Consensus 85 G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fp-ll~D 160 (252)
|..-.|.......+ .|++|...|||+|+.-.+.|.++. .++.+.-|..++.+ ..++.++++...| ++.|
T Consensus 4 ~~~~~l~~~~~~~~-~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~~~~-~~el~~~~g~~vP~l~~~ 73 (100)
T 1wjk_A 4 GSSGNLSASNRALP-VLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDITLPE-NSTWYERYKFDIPVFHLN 73 (100)
T ss_dssp CCCCCCCCSCCCCC-EEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETTSST-THHHHHHSSSSCSEEEES
T ss_pred CcchhhhhccCCCC-EEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECCCcc-hHHHHHHHCCCCCEEEEC
Confidence 33334444333334 455567899999998888776542 34888888887322 2455666665566 4444
No 227
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.40 E-value=0.0012 Score=54.08 Aligned_cols=42 Identities=17% Similarity=0.070 Sum_probs=31.9
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~ 138 (252)
++++.|+.|+.+|||+|....+.|.++.+++.. .+.+..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 467888888999999999999999887766532 455555543
No 228
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=96.37 E-value=0.0022 Score=60.31 Aligned_cols=44 Identities=18% Similarity=0.211 Sum_probs=34.9
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh--CCCEEEEEeCC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPG 139 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~--~Gv~vV~Vs~~ 139 (252)
.++.+|+.|++.||+.|+..++.+.++..++.. .++.++.|..+
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~ 420 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHT 420 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGG
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCC
Confidence 356677788899999999999999999988873 35666666654
No 229
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=96.33 E-value=0.0082 Score=48.93 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=31.7
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs 137 (252)
++++.|+.|+.+|||+|+...+.|.++.+++.. ++.+.-+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p 64 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLP 64 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEe
Confidence 578889999999999999999999877766544 45555443
No 230
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=96.32 E-value=0.0065 Score=48.43 Aligned_cols=53 Identities=15% Similarity=0.056 Sum_probs=40.4
Q ss_pred CcEEEEEEcCCCC--HhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 97 RKAVVAFARHFGC--VLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 97 ~~vvlvF~R~~~C--p~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
+..+|++||+.|| +.|+.-.+-|.++.+++.. .++++-|..|.. .+...++++
T Consensus 33 ~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~---~~la~~ygV 87 (137)
T 2qsi_A 33 GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAE---RGLMARFGV 87 (137)
T ss_dssp SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGH---HHHHHHHTC
T ss_pred CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCC---HHHHHHcCC
Confidence 3378999999999 9999999999999888853 477888877654 334445554
No 231
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.26 E-value=0.0024 Score=54.23 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=33.2
Q ss_pred cEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC
Q 025474 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+.||+.|++.||+.|+...+.|.++..++. ++.++.|..+
T Consensus 121 k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~ 160 (217)
T 2trc_P 121 TTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS 160 (217)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH
T ss_pred cEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC
Confidence 677778889999999999999999887763 6888887754
No 232
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=96.21 E-value=0.0095 Score=49.69 Aligned_cols=56 Identities=7% Similarity=0.013 Sum_probs=41.7
Q ss_pred CCcEEEEEE----cCCCCHhHHHHHHHHHHcHHHHHh-CCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 96 DRKAVVAFA----RHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 96 ~~~vvlvF~----R~~~Cp~C~~el~~L~~~~~~l~~-~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
.+|++|+|| |..||+.|+..++++.++..++.. ..+.++.|.++.. .+.++++++.
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~---~~l~~~~~v~ 80 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTH---KEETEKYGVD 80 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTC---HHHHHHTTCC
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCccc---HHHHHHcCCC
Confidence 578999998 688999999999999998777753 3477878877643 3345555544
No 233
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.20 E-value=0.0066 Score=49.31 Aligned_cols=41 Identities=20% Similarity=0.161 Sum_probs=31.1
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs 137 (252)
++++.|+.|..++||+|....+.|.++.+++.. .+.+..+.
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p 64 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVP 64 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEE
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeC
Confidence 457788888999999999999999877766532 45655444
No 234
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.19 E-value=0.0082 Score=45.70 Aligned_cols=54 Identities=19% Similarity=0.184 Sum_probs=38.0
Q ss_pred EEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceee
Q 025474 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVY 158 (252)
Q Consensus 99 vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll 158 (252)
..|+.|+..||++|..-.+.|.++.++ .|+.+.-|..+.... ..++++...|.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e---~~i~~~~vDId~d~~---l~~~ygv~VP~l 83 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKK---SWFELEVINIDGNEH---LTRLYNDRVPVL 83 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHH---SCCCCEEEETTTCHH---HHHHSTTSCSEE
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHh---cCCeEEEEECCCCHH---HHHHhCCCCceE
Confidence 346677899999999999998887654 468888888774322 334556667744
No 235
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=96.10 E-value=0.015 Score=48.19 Aligned_cols=55 Identities=16% Similarity=0.245 Sum_probs=39.2
Q ss_pred CcEEEEEEcC-------CCCHhHHHHHHHHHHcHHHHHh----CCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 97 RKAVVAFARH-------FGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 97 ~~vvlvF~R~-------~~Cp~C~~el~~L~~~~~~l~~----~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
...|||+|++ .||++|+...+.|.++..++.. ..+.+.-|..+.. .+.++++++.
T Consensus 37 ~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~---~~la~~~~I~ 102 (178)
T 3ga4_A 37 GYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEV---PQLVKDLKLQ 102 (178)
T ss_dssp TCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTC---HHHHHHTTCC
T ss_pred CCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccC---HHHHHHcCCC
Confidence 3467778888 5999999999999999988863 3466666666643 3344455654
No 236
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=95.91 E-value=0.017 Score=46.18 Aligned_cols=50 Identities=14% Similarity=0.065 Sum_probs=38.5
Q ss_pred eEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhC-CCEEEEEeC
Q 025474 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGP 138 (252)
Q Consensus 87 ~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~-Gv~vV~Vs~ 138 (252)
.+.+++- +.|+.|+.|..++||+|....+.+.+..+++.+. .++++.+..
T Consensus 19 ~~~~G~~--~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 19 GLHIGES--NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp SEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CcccCCC--CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 3555654 6788889999999999999999998887777444 477776554
No 237
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=95.74 E-value=0.012 Score=53.49 Aligned_cols=57 Identities=11% Similarity=0.064 Sum_probs=39.3
Q ss_pred CCCcEEEEEEcCCCCHhHHHHH------HHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRA------DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el------~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
+..+.+||.|++.||+.|...- +.+.+...+++..++.+..|.++.... .++++++.
T Consensus 28 ~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~---l~~~~~V~ 90 (367)
T 3us3_A 28 KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAA---VAKKLGLT 90 (367)
T ss_dssp HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHH---HHHHHTCC
T ss_pred hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHH---HHHHcCCC
Confidence 3467788888999999984322 366777777776678999998876433 34454543
No 238
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=95.62 E-value=0.015 Score=42.30 Aligned_cols=50 Identities=12% Similarity=0.175 Sum_probs=31.7
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeee
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA 159 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll~ 159 (252)
|+.|++.||++|+.-.+.|.+...++ ..-|..+.... ..++++...|.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~~~---l~~~~g~~vPtl~ 52 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDDDAA---LESAYGLRVPVLR 52 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTTCHH---HHHHHTTTCSEEE
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCCCHH---HHHHhCCCcCeEE
Confidence 56788999999998887776543321 45566654322 3445566677554
No 239
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=95.54 E-value=0.013 Score=49.21 Aligned_cols=38 Identities=18% Similarity=0.333 Sum_probs=29.8
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs 137 (252)
+++++|+.|..+|||+|++..+.|.++. +.|++++.+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~----~~~v~v~~~~ 122 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYN----DLGITVRYLA 122 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHH----HTTEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHH----hCCcEEEEEE
Confidence 4678888889999999999999887743 3478877653
No 240
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.30 E-value=0.053 Score=38.47 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=35.8
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHh-CC-Cceeeec
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT-KF-KGEVYAD 160 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~-~~-~fpll~D 160 (252)
+++|...|||+|++....|. +.|+....|..+ .+..+++.+.+ +. .+|.+..
T Consensus 8 v~~y~~~~C~~C~~~~~~L~-------~~~i~~~~vdv~-~~~~~~l~~~~~~~~~vP~l~~ 61 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLD-------KKGVKYTDIDAS-TSLRQEMVQRANGRNTFPQIFI 61 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHH-------HHTCCEEEECSC-HHHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHH-------HcCCCcEEEECC-HHHHHHHHHHhCCCCCcCEEEE
Confidence 45678899999998666554 346777777777 55566777776 54 4775543
No 241
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=95.22 E-value=0.034 Score=42.29 Aligned_cols=53 Identities=9% Similarity=0.206 Sum_probs=32.5
Q ss_pred EEEEcCCCCHhHHHH-HHHHHHcHHHHHhCC---CEEEEEeCCCH----HHHHHHHHHhCC-Cce-eeec
Q 025474 101 VAFARHFGCVLCRKR-ADYLAAKKDVMDASG---VALVLIGPGSV----EQARTFSEQTKF-KGE-VYAD 160 (252)
Q Consensus 101 lvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~G---v~vV~Vs~~~~----~~~~~f~e~~~~-~fp-ll~D 160 (252)
|++|...|||+|++. .+. |++.| +....|..+.. +..+++.+.++. .+| ++.|
T Consensus 27 Vvvf~~~~Cp~C~~alk~~-------L~~~~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~vfi~ 89 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTL-------FEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYIN 89 (118)
T ss_dssp EEEEECSSCHHHHHHHHHH-------HTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEET
T ss_pred EEEEEcCCCcCHHHHHHHH-------HHHcCCCCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEEEEC
Confidence 344778999999987 333 44555 66666666532 234456666675 466 4544
No 242
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=95.10 E-value=0.021 Score=41.78 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=29.9
Q ss_pred EEEcCCCCHhHHHHHHHHHHcHHHHHhCCCE---EEEEeCCC----HHHHHHHHHHhCCC-ceee
Q 025474 102 AFARHFGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPGS----VEQARTFSEQTKFK-GEVY 158 (252)
Q Consensus 102 vF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~---vV~Vs~~~----~~~~~~f~e~~~~~-fpll 158 (252)
++|...|||+|++..+.|.+. ++. +..|..+. .+..+.+.+.++.. +|.+
T Consensus 15 ~~f~~~~C~~C~~~~~~L~~~-------~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i 72 (105)
T 1kte_A 15 VVFIKPTCPFCRKTQELLSQL-------PFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPRV 72 (105)
T ss_dssp EEEECSSCHHHHHHHHHHHHS-------CBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE
T ss_pred EEEEcCCCHhHHHHHHHHHHc-------CCCCCccEEEEccCCCCHHHHHHHHHHHhCCCCcCeE
Confidence 446789999999877766553 433 44555443 22334456666654 6743
No 243
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.08 E-value=0.087 Score=39.23 Aligned_cols=60 Identities=15% Similarity=0.220 Sum_probs=38.7
Q ss_pred ccCCCcEEEEEEcC----CCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC-HHHHHHHHHHhCCC-ce-eeec
Q 025474 93 LWKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFK-GE-VYAD 160 (252)
Q Consensus 93 l~~~~~vvlvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~-~~~~~~f~e~~~~~-fp-ll~D 160 (252)
+.+..+ |++|..+ .|||+|++-..-|. +.|+....|..+. ++..+++.+..+.+ +| |+.|
T Consensus 11 ~i~~~~-vvvy~~g~~~~~~Cp~C~~ak~~L~-------~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~ifi~ 77 (109)
T 1wik_A 11 LTNKAS-VMLFMKGNKQEAKCGFSKQILEILN-------STGVEYETFDILEDEEVRQGLKTFSNWPTYPQLYVR 77 (109)
T ss_dssp HHTTSS-EEEEESSTTTCCCSSTHHHHHHHHH-------HTCSCEEEEESSSCHHHHHHHHHHHSCCSSCEEECS
T ss_pred HhccCC-EEEEEecCCCCCCCchHHHHHHHHH-------HcCCCeEEEECCCCHHHHHHHHHHhCCCCCCEEEEC
Confidence 334445 5567776 89999998766664 4578877777764 34445566666644 77 5554
No 244
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=94.98 E-value=0.04 Score=41.32 Aligned_cols=53 Identities=17% Similarity=0.267 Sum_probs=32.5
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCE---EEEEeCCCH----HHHHHHHHHhCC-Cce-eeec
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPGSV----EQARTFSEQTKF-KGE-VYAD 160 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~---vV~Vs~~~~----~~~~~f~e~~~~-~fp-ll~D 160 (252)
|++|...|||+|++..+.|. +.|+. +..|..+.. +..+++.+.++. .+| ++.|
T Consensus 21 vv~f~~~~Cp~C~~~~~~L~-------~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i~ 82 (114)
T 2hze_A 21 VTIFVKYTCPFCRNALDILN-------KFSFKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPRIFFG 82 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHT-------TSCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEET
T ss_pred EEEEEeCCChhHHHHHHHHH-------HcCCCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCEEEEC
Confidence 34467899999997766654 44555 666665432 333456667775 366 4443
No 245
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=94.87 E-value=0.077 Score=36.52 Aligned_cols=52 Identities=10% Similarity=0.134 Sum_probs=33.4
Q ss_pred EEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC-HHHHHHHHHHhCC-Cceeeec
Q 025474 102 AFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGEVYAD 160 (252)
Q Consensus 102 vF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~-~~~~~~f~e~~~~-~fpll~D 160 (252)
++|...|||+|++-...|.+ .|+.+..|..+. .+...++.+.++. .+|.+.+
T Consensus 4 ~~y~~~~C~~C~~~~~~l~~-------~~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~ 57 (82)
T 1fov_A 4 EIYTKETCPYCHRAKALLSS-------KGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFI 57 (82)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------HTCCCEEEECTTCSHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEECCCChhHHHHHHHHHH-------CCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE
Confidence 44668999999987766654 356655666554 3445567777665 3675543
No 246
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=94.84 E-value=0.07 Score=39.34 Aligned_cols=58 Identities=14% Similarity=0.249 Sum_probs=34.7
Q ss_pred CCCcEEEEEEc----CCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC-HHHHHHHHHHhCC-Cce-eeec
Q 025474 95 KDRKAVVAFAR----HFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGE-VYAD 160 (252)
Q Consensus 95 ~~~~vvlvF~R----~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~-~~~~~~f~e~~~~-~fp-ll~D 160 (252)
+..+ |++|+. +.|||+|++-.+-|.+ .|+....|..+. ++..+++.+.++. .+| ++.|
T Consensus 15 ~~~~-vvvf~~g~~~~~~C~~C~~~~~~L~~-------~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~i~ 79 (105)
T 2yan_A 15 NKAS-VMLFMKGNKQEAKCGFSKQILEILNS-------TGVEYETFDILEDEEVRQGLKAYSNWPTYPQLYVK 79 (105)
T ss_dssp TSSS-EEEEESBCSSSBCTTHHHHHHHHHHH-------HTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEET
T ss_pred ccCC-EEEEEecCCCCCCCccHHHHHHHHHH-------CCCCeEEEECCCCHHHHHHHHHHHCCCCCCeEEEC
Confidence 3445 445665 3899999986666544 456666666653 3444455666665 467 4444
No 247
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=94.83 E-value=0.07 Score=40.97 Aligned_cols=66 Identities=17% Similarity=0.160 Sum_probs=53.2
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC----CCHHHHHHHHHHhCCCceeeecCChHHHHHcCCcc
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~----~~~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~ 173 (252)
+.+|-..+|+.|++....| +++|+....|.. .+.++++++.+..+.+..-+.+.....|+.+|+..
T Consensus 2 i~iY~~~~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~~ 71 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWL-------NRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDV 71 (120)
T ss_dssp EEEEECSSCHHHHHHHHHH-------HHTTCCEEEEETTTSCCCHHHHHHHHHHCSSTHHHHBCTTCHHHHHTTCCG
T ss_pred EEEEeCCCCHHHHHHHHHH-------HHcCCCeEEEecccCCCcHHHHHHHHhhcCCCHHHhhcCCcHHHHHcCCCc
Confidence 5678899999999887665 456777666654 34589999999988988888889999999999764
No 248
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=94.51 E-value=0.12 Score=36.56 Aligned_cols=53 Identities=19% Similarity=0.198 Sum_probs=34.4
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC-HHHHHHHHHHhCC-Cceeeec
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGEVYAD 160 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~-~~~~~~f~e~~~~-~fpll~D 160 (252)
++.|...|||+|++-...|. +.|+.+..|..+. .+..+++.+.++. .+|.+.+
T Consensus 8 v~ly~~~~C~~C~~~~~~L~-------~~~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~~ 62 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLA-------RKGAEFNEIDASATPELRAEMQERSGRNTFPQIFI 62 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEESTTSHHHHHHHHHHHTSSCCCEEEE
T ss_pred EEEEECCCChhHHHHHHHHH-------HcCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE
Confidence 44567899999997665554 4567777777764 3445567766664 3664433
No 249
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=94.49 E-value=0.085 Score=39.24 Aligned_cols=53 Identities=15% Similarity=0.182 Sum_probs=30.5
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC----HHHHHH-HHHHhCCC-ce-eeec
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQART-FSEQTKFK-GE-VYAD 160 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~----~~~~~~-f~e~~~~~-fp-ll~D 160 (252)
|++|...|||+|++-..-|.+ .|+..-.|..+. ...+++ +.+..+.. +| ++.|
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~-------~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ifi~ 80 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKR-------LGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFVC 80 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEEET
T ss_pred EEEEECCCChhHHHHHHHHHH-------cCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEEEC
Confidence 344678999999977666654 455544444432 234444 44444654 67 5554
No 250
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=94.49 E-value=0.099 Score=40.22 Aligned_cols=67 Identities=19% Similarity=0.287 Sum_probs=53.9
Q ss_pred EEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC----CCHHHHHHHHHHhCCCceeeecCChHHHHHcCCcc
Q 025474 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 100 vlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~----~~~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~ 173 (252)
.+.+|-..+|+.|++....| +++|+..-.|.. -+.++++.+.++.+.+..-+.+.....|+.+|+..
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~~ 74 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAEL-------DDLAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSGQSYRALGLKD 74 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHH-------HHHTCCEEEEETTTSCCCHHHHHHHHHHSCCCGGGGBCTTSHHHHHTTHHH
T ss_pred eEEEEeCCCChHHHHHHHHH-------HHcCCceEEEEeccCchhHHHHHHHHHHcCCCHHHHhCCCCcchhhcCccc
Confidence 46788899999999987766 456776666543 34589999999999998888899999999999853
No 251
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=94.49 E-value=0.062 Score=45.87 Aligned_cols=46 Identities=15% Similarity=0.037 Sum_probs=33.1
Q ss_pred eEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe
Q 025474 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 87 ~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs 137 (252)
.+.++.- +.+++|+.|..+|||+|++..++|.+..++ .+++++.+.
T Consensus 89 ~i~~G~~--~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~ 134 (241)
T 1v58_A 89 WLLDGKK--DAPVIVYVFADPFCPYCKQFWQQARPWVDS---GKVQLRTLL 134 (241)
T ss_dssp CEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHT---TSEEEEEEE
T ss_pred CceECCC--CCCeEEEEEECCCChhHHHHHHHHHHHHhC---CcEEEEEEE
Confidence 4555543 568888888999999999999998775442 347766543
No 252
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=94.45 E-value=0.37 Score=47.15 Aligned_cols=72 Identities=14% Similarity=0.059 Sum_probs=45.5
Q ss_pred ccccCCCCCcEEec-CCCCeEeCCCccC--CCcEEEEEEcCCCCHhHHHHHHHHHHcH-------HHHHhC------CCE
Q 025474 69 EDTKNLLDTVKVYD-VNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKK-------DVMDAS------GVA 132 (252)
Q Consensus 69 ~~~g~~ap~f~l~d-~~G~~v~ls~l~~--~~~vvlvF~R~~~Cp~C~~el~~L~~~~-------~~l~~~------Gv~ 132 (252)
...|..+|++.+.. .+|+.+.|.+++. ++.+||+|--..-.+.+...+..+.+.. ..|... -++
T Consensus 479 ~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 558 (665)
T 1pn0_A 479 CVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGKATDATQMSRIKKFAAYLDSENSVISRYTPKGADRNSRID 558 (665)
T ss_dssp SCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEECTTSHHHHHHHHHHHHHHHSTTSHHHHHSBTTSCTTSSEE
T ss_pred CCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCCcccchhHHHHHHHHHHhhccccHHhhcCCcccCccceeE
Confidence 46899999999976 4899999999885 3566666643332344555555554433 222211 267
Q ss_pred EEEEeCCC
Q 025474 133 LVLIGPGS 140 (252)
Q Consensus 133 vV~Vs~~~ 140 (252)
++.|....
T Consensus 559 ~~~i~~~~ 566 (665)
T 1pn0_A 559 VITIHSCH 566 (665)
T ss_dssp EEEEESSC
T ss_pred EEEEecCC
Confidence 88886654
No 253
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=94.38 E-value=0.12 Score=39.84 Aligned_cols=66 Identities=15% Similarity=0.265 Sum_probs=52.4
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC----CCHHHHHHHHHHhCC-CceeeecCChHHHHHcCCcc
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKF-KGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~----~~~~~~~~f~e~~~~-~fpll~Dp~~~ly~alGv~~ 173 (252)
+.+|-..+|+.|++....| +++|+..-.|.. .+.++++.+.+..|+ +..=+.+.....|+.+|+..
T Consensus 7 i~iY~~p~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 77 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALV-------EQQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDD 77 (121)
T ss_dssp CEEECCTTCHHHHHHHHHH-------HTTTCCCEEECTTTSCCCHHHHHHHHHHTTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCCHHHHHHHHHH-------HHcCCCcEEEeeccCCCcHHHHHHHHHhcCCcCHHHHhcCCChhhhhcCccc
Confidence 5678899999999987766 456766555543 345899999999998 77668889999999999864
No 254
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=94.38 E-value=0.099 Score=40.22 Aligned_cols=65 Identities=14% Similarity=0.258 Sum_probs=52.5
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC----CCHHHHHHHHHHhCCCceeeecCChHHHHHcCCc
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFV 172 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~----~~~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~ 172 (252)
|.+|-..+|+.|++....|. ++|+..-.|.. .+.++++.+.+..+++..-+.+.....|+.+|+.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~ 74 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLI-------ENNIEYTNRLIVDDNPTVEELKAWIPLSGLPVKKFFNTSGVVYKELKLS 74 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTTCCCHHHHHHHHHHHTSCGGGGBCTTSHHHHHTTHH
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCceEEEecccCcCCHHHHHHHHHHcCCCHHHeEeCCCchhhhcCcc
Confidence 56788999999999877664 56766555543 3458999999999999888889999999999975
No 255
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=94.33 E-value=0.021 Score=44.09 Aligned_cols=42 Identities=12% Similarity=0.256 Sum_probs=26.7
Q ss_pred cEEEEEEcCCCCHhHHHHHHHHHHcHHHHH-hCCCEEEEEeCC
Q 025474 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMD-ASGVALVLIGPG 139 (252)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~-~~Gv~vV~Vs~~ 139 (252)
..+||.|++.||++|+..-+++...++.-. ...+.|+-|..+
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~ 61 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMR 61 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETT
T ss_pred CCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECC
Confidence 467778889999999998776655544321 122455555544
No 256
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=94.30 E-value=0.12 Score=39.64 Aligned_cols=66 Identities=20% Similarity=0.254 Sum_probs=53.2
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe----CCCHHHHHHHHHHhCCC-ceeeecCChHHHHHcCCcc
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG----PGSVEQARTFSEQTKFK-GEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs----~~~~~~~~~f~e~~~~~-fpll~Dp~~~ly~alGv~~ 173 (252)
+.+|-..+|+.|++....|. ++|+..-.|. +-+.++++.+.++.+++ ..-+.+.....|+.+|+..
T Consensus 6 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~t~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 76 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLE-------NQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGD 76 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------HTTCCCEEECHHHHCCCHHHHHHHHHHHTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCceEEEEeccCcCcHHHHHHHHHHcCCccHHHHhcCCCchhhhcCccc
Confidence 56788999999999877664 4666655553 34568999999999998 7778889999999999875
No 257
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=94.29 E-value=0.13 Score=41.27 Aligned_cols=88 Identities=11% Similarity=0.108 Sum_probs=53.6
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHH---HcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhC---CCceeeecCC-hHHHHHc
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLA---AKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPN-HSSYEAL 169 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~---~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~---~~fpll~Dp~-~~ly~al 169 (252)
++.|++.|.+.||+.|+.--.+.- +..+.+ +.+..+|-|..++. ...++.++++ +|+-++.|++ .+....+
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l-~~~fv~v~~d~~~~-~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~ 119 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNII-REHFIFWQVYHDSE-EGQRYIQFYKLGDFPYVSILDPRTGQKLVEW 119 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHH-HHTEEEEEEESSSH-HHHHHHHHHTCCSSSEEEEECTTTCCCCEEE
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHH-HcCeEEEEEecCCH-hHHHHHHHcCCCCCCEEEEEeCCCCcEeeec
Confidence 567788888999999998766552 223333 33677777777664 3456666665 4555889997 4322222
Q ss_pred CCccccccccChHHHHHHHHHHhh
Q 025474 170 SFVSGVLVTFTPKVCLKIIQSYME 193 (252)
Q Consensus 170 Gv~~~~~~~~~P~~~~~~~~~~~~ 193 (252)
+ . ..|......++.+..
T Consensus 120 ~------g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 120 H------Q-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp S------S-CCHHHHHHHHHHHHH
T ss_pred C------C-CCHHHHHHHHHHHHH
Confidence 2 1 356665555555433
No 258
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=94.25 E-value=0.13 Score=35.85 Aligned_cols=53 Identities=11% Similarity=0.040 Sum_probs=32.7
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH---HHHHHHHHHhCC------Cceeeec
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKF------KGEVYAD 160 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~---~~~~~f~e~~~~------~fpll~D 160 (252)
|++|...|||+|++-..-| ++.|+..-.+..+.. ....++.+.++. ..|.+..
T Consensus 6 v~ly~~~~Cp~C~~~~~~L-------~~~~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i 67 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWF-------EENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI 67 (89)
T ss_dssp EEEEECTTCHHHHHHHHHH-------HHTTCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE
T ss_pred EEEEEcCCChhHHHHHHHH-------HHcCCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE
Confidence 5667889999999865554 445544434433322 244667777776 5775443
No 259
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=94.23 E-value=0.11 Score=38.16 Aligned_cols=53 Identities=13% Similarity=0.214 Sum_probs=33.3
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH-HHHHHHHHHh-CC-Cce-eeec
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQT-KF-KGE-VYAD 160 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~-~~~~~f~e~~-~~-~fp-ll~D 160 (252)
|+.|...|||+|++-..-|.+ .|+....|..+.. +..+++.+.. +. .+| ++.|
T Consensus 18 v~vy~~~~Cp~C~~ak~~L~~-------~~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi~ 74 (99)
T 3qmx_A 18 IEIYTWSTCPFCMRALALLKR-------KGVEFQEYCIDGDNEAREAMAARANGKRSLPQIFID 74 (99)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------HTCCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEET
T ss_pred EEEEEcCCChhHHHHHHHHHH-------CCCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEEC
Confidence 445679999999998777654 3566666666544 3444555554 43 366 4444
No 260
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=94.21 E-value=0.13 Score=39.92 Aligned_cols=66 Identities=15% Similarity=0.228 Sum_probs=51.6
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC----CHHHHHHHHHHhCCCceeeecCChHHHHHcCCcc
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~----~~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~ 173 (252)
|.+|...+|+.|++-...|. +.|+....+... +.++++++.+..+.+..-+.+.....|+.+|...
T Consensus 3 i~lY~~~~C~~C~ka~~~L~-------~~gi~y~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~~ 72 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLE-------EHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNV 72 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCEEEEETTTSCCCHHHHHHHHHTCSSCGGGTBCTTSHHHHHHCCCG
T ss_pred EEEEeCCCChHHHHHHHHHH-------HcCCceEEEEccCCCccHHHHHHHHHHcCCCHHHhhcCCchHHHhcCccc
Confidence 56778899999998776664 467776665543 3478888988888888888899999999999753
No 261
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.16 E-value=0.11 Score=40.10 Aligned_cols=48 Identities=8% Similarity=0.088 Sum_probs=30.8
Q ss_pred EcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH----HHHHHHHHHhCCC-ceee
Q 025474 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV----EQARTFSEQTKFK-GEVY 158 (252)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~----~~~~~f~e~~~~~-fpll 158 (252)
|...|||+|++..+.|.+ .|+....|..+.. +..+++.+.++.. +|.+
T Consensus 32 f~~~~Cp~C~~~~~~L~~-------~~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l 84 (130)
T 2cq9_A 32 FSKTSCSYCTMAKKLFHD-------MNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRI 84 (130)
T ss_dssp EECSSCSHHHHHHHHHHH-------HTCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEE
T ss_pred EEcCCChHHHHHHHHHHH-------cCCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEE
Confidence 678999999987776654 3555555655532 3334566777754 7744
No 262
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=94.11 E-value=0.092 Score=40.67 Aligned_cols=53 Identities=17% Similarity=0.237 Sum_probs=30.9
Q ss_pred EEEEcCCCCHhHHHH-HHHHHHcHHHHHhCC---CEEEEEeCC--C--HHHHHHHHHHhCC-Cce-eeec
Q 025474 101 VAFARHFGCVLCRKR-ADYLAAKKDVMDASG---VALVLIGPG--S--VEQARTFSEQTKF-KGE-VYAD 160 (252)
Q Consensus 101 lvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~G---v~vV~Vs~~--~--~~~~~~f~e~~~~-~fp-ll~D 160 (252)
|++|...|||+|++. ..-| ++.| +....|..+ + .+..+++.+.++. .+| |+.|
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L-------~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~vfi~ 101 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLF-------QELNVPKSKALVLELDEMSNGSEIQDALEEISGQKTVPNVYIN 101 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------TTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEET
T ss_pred EEEEECCCCCchHHHHHHHH-------HhcCccCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEEEEC
Confidence 345567999999977 4444 3445 555555543 2 2233456666775 477 5554
No 263
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.08 E-value=0.12 Score=36.63 Aligned_cols=55 Identities=13% Similarity=0.184 Sum_probs=33.2
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHH----HHHHHHHhCC-Cceeeec
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ----ARTFSEQTKF-KGEVYAD 160 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~----~~~f~e~~~~-~fpll~D 160 (252)
|.+|...|||+|++-...|.+. ...+..+-|...+.+. ..++.+.++. ..|++.+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~-----gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~ 73 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE-----GVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK 73 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH-----TCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE
Confidence 4456789999999876666543 1223444444333322 3677777774 5786666
No 264
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=93.92 E-value=0.13 Score=40.41 Aligned_cols=55 Identities=11% Similarity=0.214 Sum_probs=35.5
Q ss_pred EEEEEcC----CCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC-CHHHHHHHHHHhCCC-ce-eeecC
Q 025474 100 VVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFK-GE-VYADP 161 (252)
Q Consensus 100 vlvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~-~~~~~~~f~e~~~~~-fp-ll~Dp 161 (252)
|++|.++ .|||+|++-..-|. +.|+....|..+ +++..+++.+..+.+ +| |+.|-
T Consensus 37 Vvvy~ks~~~~~~Cp~C~~ak~~L~-------~~gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~VfI~G 98 (135)
T 2wci_A 37 ILLYMKGSPKLPSCGFSAQAVQALA-------ACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDG 98 (135)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHH-------TTCSCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred EEEEEEecCCCCCCccHHHHHHHHH-------HcCCceEEEECCCCHHHHHHHHHHHCCCCcCEEEECC
Confidence 5567776 89999998766664 446766666654 344445566655654 77 66663
No 265
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=93.90 E-value=0.055 Score=44.44 Aligned_cols=41 Identities=15% Similarity=0.075 Sum_probs=30.8
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs 137 (252)
.+++.|+.|..+|||+|+...+.|.++.+++.+ .+.+.-+.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p 63 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEH 63 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEE
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEec
Confidence 367888888999999999999998877666544 35444443
No 266
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=93.84 E-value=0.054 Score=51.40 Aligned_cols=60 Identities=12% Similarity=0.117 Sum_probs=42.2
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC-ce-eeec
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE-VYAD 160 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~-fp-ll~D 160 (252)
.++..|.+|+..|||+|+...+.|.+...++. ++++..|..+.. .+..+++++. .| ++.|
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~---~~~~~~~~i~svPt~~i~ 177 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTF---QNEITERNVMGVPAVFVN 177 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTC---HHHHHHTTCCSSSEEEET
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhh---HHHHHHhCCCccCEEEEC
Confidence 36788899999999999999999988766543 678887877643 3344455543 44 4444
No 267
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=93.79 E-value=0.29 Score=34.54 Aligned_cols=46 Identities=11% Similarity=0.039 Sum_probs=30.7
Q ss_pred EEEcCC----CCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC------CHHHHHHHHHHhCCC
Q 025474 102 AFARHF----GCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SVEQARTFSEQTKFK 154 (252)
Q Consensus 102 vF~R~~----~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~------~~~~~~~f~e~~~~~ 154 (252)
++|... |||+|++-..-| +++|+..-.|..+ +.+..+++.+..+..
T Consensus 3 ~iY~~~~~~~~Cp~C~~ak~~L-------~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~ 58 (87)
T 1aba_A 3 KVYGYDSNIHKCGPCDNAKRLL-------TVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRD 58 (87)
T ss_dssp EEEECCTTTSCCHHHHHHHHHH-------HHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCS
T ss_pred EEEEeCCCCCcCccHHHHHHHH-------HHcCCCEEEEEeeccccccCHHHHHHHHHHhCCC
Confidence 445678 999998765554 4467776666665 345556677777765
No 268
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=93.64 E-value=0.13 Score=40.67 Aligned_cols=67 Identities=13% Similarity=0.123 Sum_probs=53.0
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC----CHHHHHHHHHHhCCCceeeecCChHHHHHcCCccc
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~----~~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~ 174 (252)
|.+|-..+|+.|++....| +++|+..-.|... +.++++++.++.+++..-+.+.....|+.+|+...
T Consensus 4 itiY~~p~C~~crkak~~L-------~~~gi~~~~idi~~~~~~~~eL~~~~~~~g~p~~~l~n~~~~~yk~l~l~~~ 74 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMI-------RNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAED 74 (141)
T ss_dssp CEEECCTTCHHHHHHHHHH-------HHTTCCCEEECTTTSCCCHHHHHHHHHHHTSCHHHHBCSSSHHHHHTTTTSS
T ss_pred EEEEECCCChHHHHHHHHH-------HHcCCCEEEEECCCCCccHHHHHHHhcccCCCHHHhccCCchhHHhcCCccc
Confidence 4578899999999876665 4567776666543 45789999999999988777999999999998753
No 269
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=93.50 E-value=0.15 Score=40.46 Aligned_cols=48 Identities=8% Similarity=0.060 Sum_probs=30.1
Q ss_pred EcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC----HHHHHHHHHHhCCC-ceee
Q 025474 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQARTFSEQTKFK-GEVY 158 (252)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~----~~~~~~f~e~~~~~-fpll 158 (252)
|...|||+|+...+.|.+. |+....|..+. .+..+++.+.++.. +|.+
T Consensus 54 f~~~~Cp~C~~~k~~L~~~-------~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~i 106 (146)
T 2ht9_A 54 FSKTSCSYCTMAKKLFHDM-------NVNYKVVELDLLEYGNQFQDALYKMTGERTVPRI 106 (146)
T ss_dssp EECTTCHHHHHHHHHHHHH-------TCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEE
T ss_pred EECCCChhHHHHHHHHHHc-------CCCeEEEECccCcCCHHHHHHHHHHhCCCCcCeE
Confidence 6789999999877766543 45544554442 23334566777754 7744
No 270
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=92.97 E-value=0.31 Score=36.49 Aligned_cols=50 Identities=14% Similarity=0.193 Sum_probs=30.3
Q ss_pred EcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC---CHHHHHH-HHHHhCCC-ce-eeec
Q 025474 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG---SVEQART-FSEQTKFK-GE-VYAD 160 (252)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~---~~~~~~~-f~e~~~~~-fp-ll~D 160 (252)
|...|||+|.+-..-|.+ .|+..-.|..+ +...+++ +.+..+.+ +| ++.|
T Consensus 22 y~~~~Cp~C~~ak~~L~~-------~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi~ 77 (114)
T 3h8q_A 22 FSKSYCPHSTRVKELFSS-------LGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVN 77 (114)
T ss_dssp EECTTCHHHHHHHHHHHH-------TTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEET
T ss_pred EEcCCCCcHHHHHHHHHH-------cCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEEC
Confidence 667999999877666654 45555555544 3344433 44566654 77 5555
No 271
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=92.94 E-value=0.37 Score=45.34 Aligned_cols=35 Identities=23% Similarity=0.172 Sum_probs=27.3
Q ss_pred CCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEE
Q 025474 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVA 102 (252)
Q Consensus 67 ~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlv 102 (252)
++...|..+|+.-|.+ +|+.+++-|++..+-+||.
T Consensus 418 ~~~~pG~r~p~~~l~~-~~~~~~~~dl~g~~f~ll~ 452 (535)
T 3ihg_A 418 PSGRPGFRGPHVLVSR-HGERLSTVDLFGDGWTLLA 452 (535)
T ss_dssp CCCCTTSBCCCCEEEE-TTEEEEGGGGCSSSEEEEE
T ss_pred CCCCCCCcCCCceeec-CCceeeHHHhcCCceEEEe
Confidence 3457899999999853 6888999999977766665
No 272
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=92.81 E-value=0.19 Score=44.58 Aligned_cols=56 Identities=7% Similarity=0.070 Sum_probs=41.0
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
.+.++++|...||+.|++.++.|.+...+++.. +.++.|.++.. .....++.+++.
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~-~~~~~~~~fgi~ 190 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHT-DNQRILEFFGLK 190 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSG-GGHHHHHHTTCC
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChH-HHHHHHHHcCCC
Confidence 356677778899999999999999999998765 77888877732 123344555553
No 273
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=92.51 E-value=0.081 Score=43.26 Aligned_cols=41 Identities=29% Similarity=0.410 Sum_probs=27.6
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHH---HHcHHHHHhCCCEEEEEeC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~vV~Vs~ 138 (252)
.+++|+.|+ .+|||+|....+.| .++.+++.+ +++++-+..
T Consensus 14 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 57 (189)
T 3l9v_A 14 DAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHV 57 (189)
T ss_dssp TCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEEC
T ss_pred CCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEec
Confidence 456677666 89999999998876 344443432 577776654
No 274
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.44 E-value=0.32 Score=36.45 Aligned_cols=48 Identities=6% Similarity=-0.005 Sum_probs=28.6
Q ss_pred EEEEcCCCCHhHHH-HHHHHHHcHHHHHhCCCEEEEEeCCCH-HHHHHHHHH
Q 025474 101 VAFARHFGCVLCRK-RADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQ 150 (252)
Q Consensus 101 lvF~R~~~Cp~C~~-el~~L~~~~~~l~~~Gv~vV~Vs~~~~-~~~~~f~e~ 150 (252)
|+.|-..+||+|.. +.++ +....|+++|+....|..+.. +..+++.+.
T Consensus 10 V~vy~~~~C~~C~~~~~~~--~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~ 59 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQ--DVVRFLEANKIEFEEVDITMSEEQRQWMYKN 59 (111)
T ss_dssp EEEEECSSCSCHHHHHHHH--HHHHHHHHTTCCEEEEETTTCHHHHHHHHHS
T ss_pred EEEEEcCCCCCcccchhHH--HHHHHHHHcCCCEEEEECCCCHHHHHHHHHH
Confidence 34456799999994 1111 122335678888888887654 344445555
No 275
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=92.34 E-value=0.25 Score=47.96 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=27.5
Q ss_pred ccccCCCCCcEEec-CCCCeEeCCCccC--CCcEEEEE
Q 025474 69 EDTKNLLDTVKVYD-VNGNAIPISDLWK--DRKAVVAF 103 (252)
Q Consensus 69 ~~~g~~ap~f~l~d-~~G~~v~ls~l~~--~~~vvlvF 103 (252)
...|..+|++.|.. .+|+.+.|.+++. ++.+||+|
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~ 504 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAF 504 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEE
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEe
Confidence 46799999999876 4899999999885 34556655
No 276
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=92.17 E-value=0.081 Score=45.62 Aligned_cols=58 Identities=12% Similarity=0.016 Sum_probs=39.1
Q ss_pred CCCcEEEEEEcC--CCCHhHHHHHHHHHHcHHHHHh-CCCEEEEEeCCC--HHHHHHHHHHhCCC---ce
Q 025474 95 KDRKAVVAFARH--FGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGS--VEQARTFSEQTKFK---GE 156 (252)
Q Consensus 95 ~~~~vvlvF~R~--~~Cp~C~~el~~L~~~~~~l~~-~Gv~vV~Vs~~~--~~~~~~f~e~~~~~---fp 156 (252)
...+.+||.|++ +||+ ..+.+.++..++.. .++.+..|.+++ -.....+++++++. +|
T Consensus 20 ~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~P 85 (240)
T 2qc7_A 20 PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYP 85 (240)
T ss_dssp GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCS
T ss_pred cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCCC
Confidence 345667777788 9999 66777777777764 457888888654 12234466677766 66
No 277
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=92.14 E-value=0.12 Score=44.78 Aligned_cols=58 Identities=7% Similarity=-0.026 Sum_probs=39.8
Q ss_pred CCCcEEEEEEc--CCCCHhHHHHHHHHHHcHHHHHh--CCCEEEEEeCCC--HHHHHHHHHHhCCC---ce
Q 025474 95 KDRKAVVAFAR--HFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGS--VEQARTFSEQTKFK---GE 156 (252)
Q Consensus 95 ~~~~vvlvF~R--~~~Cp~C~~el~~L~~~~~~l~~--~Gv~vV~Vs~~~--~~~~~~f~e~~~~~---fp 156 (252)
...+.+||.|+ ++||+ ..+.+.++..++.. ..+.+.-|.++. .+.....++++++. ||
T Consensus 31 ~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~P 97 (248)
T 2c0g_A 31 ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNFP 97 (248)
T ss_dssp TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSCC
T ss_pred hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCCC
Confidence 34456666677 99998 77778887777765 468888888776 11134566677776 66
No 278
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=92.04 E-value=0.038 Score=49.26 Aligned_cols=26 Identities=15% Similarity=0.349 Sum_probs=21.6
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHH
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVM 126 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l 126 (252)
++.|.+.|||+|++..+.+++..+++
T Consensus 201 vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 201 GTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp CEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 45678999999999999998876554
No 279
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=91.92 E-value=0.44 Score=34.77 Aligned_cols=21 Identities=29% Similarity=0.493 Sum_probs=16.8
Q ss_pred EEEEcCCCCHhHHHHHHHHHH
Q 025474 101 VAFARHFGCVLCRKRADYLAA 121 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~ 121 (252)
|++|...|||+|++-..-|.+
T Consensus 24 v~ly~~~~Cp~C~~ak~~L~~ 44 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTKKLLTD 44 (103)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHHH
Confidence 445789999999998877765
No 280
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=91.70 E-value=0.048 Score=45.38 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=28.6
Q ss_pred cEEEEEEcCCCCHhHHHHHHHH---HHcHHHHHhCCCEEEEEeCC
Q 025474 98 KAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPG 139 (252)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~vV~Vs~~ 139 (252)
+++|+-|+.+|||+|....+.| .++.+++. .++.+.-+-.+
T Consensus 114 ~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~-~~v~~~~~~v~ 157 (197)
T 1un2_A 114 APQVLEFFSFFCPHCYQFEEVLHISDNVKKKLP-EGVKMTKYHVN 157 (197)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSC-TTCCEEEEECS
T ss_pred CCEEEEEECCCChhHHHhCcccccHHHHHHHCC-CCCEEEEeccC
Confidence 4556666679999999999887 66655553 35666666553
No 281
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=91.60 E-value=0.58 Score=35.67 Aligned_cols=56 Identities=18% Similarity=0.249 Sum_probs=34.8
Q ss_pred EEEEEEcC----CCCHhHHHHHHHHHHcHHHHHhCCCE---EEEEeCCCHHHH-HHHHHHhCCC-ce-eeecC
Q 025474 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPGSVEQA-RTFSEQTKFK-GE-VYADP 161 (252)
Q Consensus 99 vvlvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~---vV~Vs~~~~~~~-~~f~e~~~~~-fp-ll~Dp 161 (252)
-|++|-.. .|||+|++-..-|.+ .|+. ...+..+....+ +.+.+..+.+ +| |+.|-
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI~g 82 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGN-------QGVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLYVNK 82 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHH-------HTBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHH-------cCCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeEEECC
Confidence 36677777 499999988766655 3555 555555433334 4454555654 77 77764
No 282
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=91.32 E-value=0.6 Score=35.61 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=33.7
Q ss_pred EEEEEEcC----CCCHhHHHHHHHHHHcHHHHHhCCCE-EEEEeCCCHHHH-HHHHHHhCC-Cce-eeecC
Q 025474 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQA-RTFSEQTKF-KGE-VYADP 161 (252)
Q Consensus 99 vvlvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~-vV~Vs~~~~~~~-~~f~e~~~~-~fp-ll~Dp 161 (252)
-|++|-.. .|||+|.+-..-|.+ .|+. ...|..+....+ +.+.+..+. .+| |+.|-
T Consensus 21 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI~g 84 (118)
T 2wem_A 21 KVVVFLKGTPEQPQCGFSNAVVQILRL-------HGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNG 84 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred CEEEEEecCCCCCccHHHHHHHHHHHH-------cCCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEEECC
Confidence 36667777 499999987666554 4663 555555433334 444444454 477 67764
No 283
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=91.30 E-value=0.58 Score=33.48 Aligned_cols=53 Identities=4% Similarity=-0.068 Sum_probs=32.7
Q ss_pred EEEcCCCCHhHH-----HHHHHHHHcHHHHHhCCCEEEEEeCCCH-HHHHHHHHHhCC---Cce-eeec
Q 025474 102 AFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQTKF---KGE-VYAD 160 (252)
Q Consensus 102 vF~R~~~Cp~C~-----~el~~L~~~~~~l~~~Gv~vV~Vs~~~~-~~~~~f~e~~~~---~fp-ll~D 160 (252)
+.|-..+||+|. ..+.++ |++.|+....|..+.. +..+++.+..+. .+| |+.|
T Consensus 5 ~ly~~~~C~~c~~~~~~~~ak~~------L~~~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi~ 67 (93)
T 1t1v_A 5 RVYSTSVTGSREIKSQQSEVTRI------LDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVNG 67 (93)
T ss_dssp EEEECSSCSCHHHHHHHHHHHHH------HHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEET
T ss_pred EEEEcCCCCCchhhHHHHHHHHH------HHHCCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEEC
Confidence 345679999994 333333 5567887777777543 444556666663 467 5555
No 284
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=91.01 E-value=0.24 Score=37.36 Aligned_cols=64 Identities=13% Similarity=0.164 Sum_probs=47.9
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC----CHHHHHHHHHHhCCCceeeecCChHHHHHcCCcc
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~----~~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~ 173 (252)
|.+|-..+|+.|++....|. ++|+..-.|... +.+++++|.++.|+ .-+.+.....|+.+|...
T Consensus 2 i~iY~~~~C~~C~kak~~L~-------~~gi~~~~~di~~~~~~~~~l~~~~~~~g~--~~l~n~~~~~~k~l~~~~ 69 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLD-------EHKVAYDFHDYKAVGIDREHLRRWCAEHGW--QTVLNRAGTTFRKLDEAQ 69 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHH-------HTTCCEEEEEHHHHCCCHHHHHHHHHHHCH--HHHBCTTSHHHHTSCHHH
T ss_pred EEEEECCCChHHHHHHHHHH-------HCCCceEEEeecCCCCCHHHHHHHHHhCCh--HHhccCCcHhHHhcCccc
Confidence 45677899999998776654 467776666543 34788999988874 666788899999998753
No 285
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=90.98 E-value=0.37 Score=36.72 Aligned_cols=53 Identities=8% Similarity=0.027 Sum_probs=37.7
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
...|++.||+. |..|+...+.|.++..+++.+ +.++-|..+.... .++++++.
T Consensus 23 ~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~~~~---~a~~~gi~ 75 (133)
T 2djk_A 23 GIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKAFGA---HAGNLNLK 75 (133)
T ss_dssp TSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTTTGG---GTTTTTCC
T ss_pred CCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHHhHH---HHHHcCCC
Confidence 34567777888 889999999999988887543 7788888764432 34455553
No 286
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=90.95 E-value=0.51 Score=35.10 Aligned_cols=59 Identities=15% Similarity=0.140 Sum_probs=35.5
Q ss_pred CCCcEEEEEEcC----CCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC-CHHHHHHHHHHhCC-Cce-eeecC
Q 025474 95 KDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKF-KGE-VYADP 161 (252)
Q Consensus 95 ~~~~vvlvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~-~~~~~~~f~e~~~~-~fp-ll~Dp 161 (252)
+..+ |++|... .|||+|++-..-|.+ .|+....|..+ +.+..+++.+..+. .+| ++.|-
T Consensus 16 ~~~~-Vvvy~k~t~~~p~Cp~C~~ak~~L~~-------~gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi~g 81 (109)
T 3ipz_A 16 NSEK-VVLFMKGTRDFPMCGFSNTVVQILKN-------LNVPFEDVNILENEMLRQGLKEYSNWPTFPQLYIGG 81 (109)
T ss_dssp TSSS-EEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEEETT
T ss_pred ccCC-EEEEEecCCCCCCChhHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHHHCCCCCCeEEECC
Confidence 3344 5667776 499999987766654 46665555554 33334445555454 366 66663
No 287
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=90.75 E-value=0.57 Score=35.57 Aligned_cols=64 Identities=14% Similarity=0.159 Sum_probs=47.7
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC----CCHHHHHHHHHHhCCCceeeecCChHHHHHcCCcc
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~----~~~~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~ 173 (252)
|.+|-..+|+.|++....|.+ +|+..-.|.. .+.++++++.++.|+ .-+.+.....|+.+|...
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~~l~~~~~~~g~--~~l~n~~~~~~k~l~~~~ 74 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAETLDRFLKTVPW--EQLLNRAGTTFRKLPEDV 74 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHHHHHHHHHHSCG--GGTBCSSSHHHHHSCHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHHHHHHHHHHcCh--HhhccCCchhhHhcCchh
Confidence 567788999999987776654 5666555543 344788889888774 566788999999999753
No 288
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=88.61 E-value=0.5 Score=37.38 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=27.6
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEE
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~V 136 (252)
+++++.|+.|--++||+|++..+.|.++ .+++|+.+
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l------~~v~v~~~ 47 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM------TDVTVYSF 47 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC------CSEEEEEE
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc------CceEEEEE
Confidence 3567888888899999999999988664 24666654
No 289
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=88.57 E-value=0.8 Score=34.30 Aligned_cols=61 Identities=11% Similarity=0.154 Sum_probs=35.9
Q ss_pred ccCCCcEEEEEEcC----CCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC-HHHHHHHHHHhCC-Cce-eeecC
Q 025474 93 LWKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGE-VYADP 161 (252)
Q Consensus 93 l~~~~~vvlvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~-~~~~~~f~e~~~~-~fp-ll~Dp 161 (252)
+.+..+ |++|..+ .|||+|++-..-|. +.|+....+..+. ++..+++.+..+. .+| |+.|-
T Consensus 12 ~i~~~~-Vvlf~kg~~~~~~Cp~C~~ak~~L~-------~~gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ifi~g 79 (111)
T 3zyw_A 12 LTHAAP-CMLFMKGTPQEPRCGFSKQMVEILH-------KHNIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYVSG 79 (111)
T ss_dssp HHTSSS-EEEEESBCSSSBSSHHHHHHHHHHH-------HTTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred HHhcCC-EEEEEecCCCCCcchhHHHHHHHHH-------HcCCCeEEEECcCCHHHHHHHHHHHCCCCCCEEEECC
Confidence 334444 5566653 89999998776665 4566655555543 3333445555454 477 66663
No 290
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=88.17 E-value=0.24 Score=40.31 Aligned_cols=36 Identities=17% Similarity=0.298 Sum_probs=25.7
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEE
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~V 136 (252)
+++|+ -|..+|||+|....+.|.++.+++ ++.+.-+
T Consensus 23 ~~~vv-ef~d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~ 58 (185)
T 3feu_A 23 MAPVT-EVFALSCGHCRNMENFLPVISQEA---GTDIGKM 58 (185)
T ss_dssp CCSEE-EEECTTCHHHHHHGGGHHHHHHHH---TSCCEEE
T ss_pred CCEEE-EEECCCChhHHHhhHHHHHHHHHh---CCeEEEE
Confidence 34444 455799999999999888887777 4544433
No 291
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=87.42 E-value=1.1 Score=32.59 Aligned_cols=51 Identities=10% Similarity=0.019 Sum_probs=32.5
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCH-HHHHHHHHHh-C-CCceee
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQT-K-FKGEVY 158 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~-~~~~~f~e~~-~-~~fpll 158 (252)
|+.|-..|||+|.+--.- |+++|+...-|..+.. +..+.+.+.. | -..|.+
T Consensus 6 I~vYs~~~Cp~C~~aK~~-------L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I 59 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTA-------LTANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTV 59 (92)
T ss_dssp EEEEECTTCSSHHHHHHH-------HHHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEE
T ss_pred EEEEcCCCCHhHHHHHHH-------HHhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEE
Confidence 344678999999985444 4567888777777654 4444555543 3 347743
No 292
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=86.93 E-value=1.8 Score=33.17 Aligned_cols=56 Identities=18% Similarity=0.208 Sum_probs=33.5
Q ss_pred EEEEEEcC----CCCHhHHHHHHHHHHcHHHHHhCCCE-EEEEeCCC-HHHHHHHHHHhCCC-ce-eeecC
Q 025474 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGS-VEQARTFSEQTKFK-GE-VYADP 161 (252)
Q Consensus 99 vvlvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~-vV~Vs~~~-~~~~~~f~e~~~~~-fp-ll~Dp 161 (252)
-||+|.-+ +.||+|.+-..-|. +.|+. ...|..++ ++.-+...+..+++ +| ||.+-
T Consensus 21 ~VvvF~Kgt~~~P~C~fc~~ak~lL~-------~~gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIFI~g 84 (118)
T 2wul_A 21 KVVVFLKGTPEQPQCGFSNAVVQILR-------LHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNG 84 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHH-------HTTCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred CEEEEEcCCCCCCCCHHHHHHHHHHH-------HhCCcCeEeecccCCHHHHHHHHHhccCCCCCeEeECC
Confidence 35677776 48999998776654 44552 34444433 33334444556665 77 88874
No 293
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=84.15 E-value=0.78 Score=37.38 Aligned_cols=43 Identities=9% Similarity=-0.066 Sum_probs=32.1
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs 137 (252)
++.|+.|+.|--+.||+|.+..+.+.+...++..-.++++...
T Consensus 12 g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 4678999999999999999998888776555422246666543
No 294
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=83.85 E-value=1 Score=36.74 Aligned_cols=39 Identities=18% Similarity=0.203 Sum_probs=26.3
Q ss_pred cEEEEEEcCCCCHhHHHHHHHH---HHcHHHHHhCCCEEEEEe
Q 025474 98 KAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIG 137 (252)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~vV~Vs 137 (252)
++.|+-|..++||+|...-+.| .++.+++.+ +++++-+.
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~ 63 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYH 63 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEE
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEEe
Confidence 3455566699999999988876 355555433 46666554
No 295
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=81.92 E-value=2.2 Score=33.80 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=26.3
Q ss_pred cEEEEEEcCCCCHhHHHHHHHH-HHcHHHHHhCCCEEEEEeC
Q 025474 98 KAVVAFARHFGCVLCRKRADYL-AAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~el~~L-~~~~~~l~~~Gv~vV~Vs~ 138 (252)
++++.| ..+.||+|....+.| .++.+++. ..+++..+..
T Consensus 19 ~~~ief-~d~~CP~C~~~~~~l~~~l~~~~~-~~v~~~~~~l 58 (195)
T 3c7m_A 19 KTLIKV-FSYACPFCYKYDKAVTGPVSEKVK-DIVAFTPFHL 58 (195)
T ss_dssp TEEEEE-ECTTCHHHHHHHHHTHHHHHHHTT-TTCEEEEEEC
T ss_pred cEEEEE-EeCcCcchhhCcHHHHHHHHHhCC-CceEEEEEec
Confidence 345554 569999999988888 66665543 2366666653
No 296
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=81.03 E-value=4.5 Score=31.03 Aligned_cols=63 Identities=8% Similarity=0.115 Sum_probs=35.1
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC-CHHHHHHHH-HHhCC-Cce-eeecC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFS-EQTKF-KGE-VYADP 161 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~-~~~~~~~f~-e~~~~-~fp-ll~Dp 161 (252)
+..+ |++| -..|||+|.+--.-|.+... + .-...++-|..+ +.+.++++. +..+. ++| |+.|-
T Consensus 12 ~~~~-Vvvy-sk~~Cp~C~~ak~lL~~~~~-~-~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI~G 78 (127)
T 3l4n_A 12 DLSP-IIIF-SKSTCSYSKGMKELLENEYQ-F-IPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLVNG 78 (127)
T ss_dssp TSCS-EEEE-ECTTCHHHHHHHHHHHHHEE-E-ESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETT
T ss_pred ccCC-EEEE-EcCCCccHHHHHHHHHHhcc-c-CCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEECC
Confidence 3445 4444 46999999988777765210 0 112445555543 334566655 34464 477 77764
No 297
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=80.86 E-value=2.2 Score=33.98 Aligned_cols=42 Identities=12% Similarity=0.295 Sum_probs=30.1
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHH-HcHHHHHhC-CCEEEEEe
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDAS-GVALVLIG 137 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~-~~~~~l~~~-Gv~vV~Vs 137 (252)
+.++.|+.|.-+-||+|....+.+. .+.+++-+. +++++...
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 4577788888999999999988884 455555433 47777654
No 298
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=80.58 E-value=1.7 Score=36.30 Aligned_cols=52 Identities=15% Similarity=0.181 Sum_probs=30.6
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC-Cceeee
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF-KGEVYA 159 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~-~fpll~ 159 (252)
+.+|...|||+|++-...|.+ +|+....|..+.....+++.+.++. ..|.+.
T Consensus 172 i~ly~~~~Cp~C~~a~~~L~~-------~~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~ 224 (241)
T 1nm3_A 172 ISIFTKPGCPFCAKAKQLLHD-------KGLSFEEIILGHDATIVSVRAVSGRTTVPQVF 224 (241)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCCEEEETTTTCCHHHHHHHTCCSSSCEEE
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEECCCchHHHHHHHHhCCCCcCEEE
Confidence 455667899999977666554 4555444444332223556666665 367444
No 299
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=79.74 E-value=5.3 Score=30.71 Aligned_cols=55 Identities=5% Similarity=0.051 Sum_probs=36.6
Q ss_pred EEEEcCCCCHhHH-----HHHHHHHHcHHHHHhCCCEEEEEeCC-CHHHHHHHHHHh--------CCC-ce-eeecC
Q 025474 101 VAFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQT--------KFK-GE-VYADP 161 (252)
Q Consensus 101 lvF~R~~~Cp~C~-----~el~~L~~~~~~l~~~Gv~vV~Vs~~-~~~~~~~f~e~~--------~~~-fp-ll~Dp 161 (252)
|..|-.+.||+|. ..+..| |+.+|+..--|..+ +.+.-+++.++. |.+ .| |+.|.
T Consensus 2 V~vYtt~~c~~c~~kk~c~~aK~l------L~~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi~~ 72 (121)
T 1u6t_A 2 IRVYIASSSGSTAIKKKQQDVLGF------LEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFNES 72 (121)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHH------HHHTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEETT
T ss_pred EEEEecCCCCCccchHHHHHHHHH------HHHCCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEECC
Confidence 5556699999995 444443 77889988888876 445555666665 433 55 77764
No 300
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=79.68 E-value=1.8 Score=36.56 Aligned_cols=45 Identities=13% Similarity=0.094 Sum_probs=29.4
Q ss_pred CCcEEEEEEcCCC--CHhHHHHHHHHHHcHHHHHh-CC---CEEEEEeCCCH
Q 025474 96 DRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDA-SG---VALVLIGPGSV 141 (252)
Q Consensus 96 ~~~vvlvF~R~~~--Cp~C~~el~~L~~~~~~l~~-~G---v~vV~Vs~~~~ 141 (252)
++|++|.|| ..| |+.|++-.+-|.++...... +| +.++.|..+..
T Consensus 25 ~~pv~v~~~-~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~ 75 (243)
T 2hls_A 25 VNPVEVHVF-LSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESD 75 (243)
T ss_dssp CSCEEEEEE-ECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTT
T ss_pred CCCEEEEEE-eCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcC
Confidence 467777776 667 99999988777776655321 12 56666665543
No 301
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.73 E-value=6.9 Score=31.78 Aligned_cols=97 Identities=12% Similarity=0.008 Sum_probs=56.5
Q ss_pred CCCcEEEEEEcCCCCHhHHHHHHHHHHc--HHHHHhCCCEEEEEeCCCHHHHHHH---------------H---HHhCCC
Q 025474 95 KDRKAVVAFARHFGCVLCRKRADYLAAK--KDVMDASGVALVLIGPGSVEQARTF---------------S---EQTKFK 154 (252)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~el~~L~~~--~~~l~~~Gv~vV~Vs~~~~~~~~~f---------------~---e~~~~~ 154 (252)
+++|.|+|++.+.||+.|+....++-.. .-++-+.+.-+.+....+.+..+.| . +-.++|
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P 132 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFP 132 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCS
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCC
Confidence 4678999999999999999988765222 2233344677778778777633211 1 123466
Q ss_pred ceeeecCChHHHHHcCCccccccccChHHHHHHHHHHhhh
Q 025474 155 GEVYADPNHSSYEALSFVSGVLVTFTPKVCLKIIQSYMEG 194 (252)
Q Consensus 155 fpll~Dp~~~ly~alGv~~~~~~~~~P~~~~~~~~~~~~g 194 (252)
+-++.++.+. ...+.....+...|..+...++..++.
T Consensus 133 ~l~ii~~~~~---~~~vl~~~~G~~~~~~ll~~L~~~~e~ 169 (178)
T 2ec4_A 133 LFLIIMGKRS---SNEVLNVIQGNTTVDELMMRLMAAMEI 169 (178)
T ss_dssp EEEEECCCSS---CCCEEEEECSCCCHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCC---ceEEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 6678887632 112211222334566665555544443
No 302
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=77.89 E-value=3.5 Score=32.13 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=26.3
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEE
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~V 136 (252)
..++|+-|+ -+.||+|...-+.+.++..++.+ ++.++-+
T Consensus 21 ~~~~vvEf~-dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~ 59 (184)
T 4dvc_A 21 SSPVVSEFF-SFYCPHCNTFEPIIAQLKQQLPE-GAKFQKN 59 (184)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TCEEEEE
T ss_pred CCCEEEEEE-CCCCHhHHHHhHHHHHHHhhcCC-ceEEEEE
Confidence 345666665 79999999988777776665533 3455544
No 303
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=76.78 E-value=2.5 Score=37.19 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=27.9
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~ 138 (252)
++.+|+.|.-+-||+|++..++|.+..+ +-.++++.+..
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~---~~~Vr~i~~Pi 185 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLK---ENTVRMVVVGW 185 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHH---HCEEEEEECCC
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhh---CCcEEEEEeec
Confidence 4556666679999999999999986543 34456665543
No 304
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=71.64 E-value=4.8 Score=32.93 Aligned_cols=42 Identities=12% Similarity=0.186 Sum_probs=28.9
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHH-HcHHHHHh-CCCEEEEEe
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDA-SGVALVLIG 137 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~-~~~~~l~~-~Gv~vV~Vs 137 (252)
+.|+.|+.|--+.||+|.+.-+.+. .+.+++-+ -.++++..-
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~ 71 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVN 71 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEe
Confidence 5688888888999999998777653 34444433 346666554
No 305
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=70.76 E-value=8.7 Score=31.63 Aligned_cols=48 Identities=10% Similarity=0.006 Sum_probs=33.1
Q ss_pred EeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHH-HHHhC-CCEEEEEe
Q 025474 88 IPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKD-VMDAS-GVALVLIG 137 (252)
Q Consensus 88 v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~-~l~~~-Gv~vV~Vs 137 (252)
..+++- +.|+.|+.|--+-||+|.+..+.+..... ++-+. .++++...
T Consensus 8 ~~~G~~--~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~ 57 (205)
T 3gmf_A 8 HLLGNP--AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRN 57 (205)
T ss_dssp EEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred ceecCC--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 445553 67898899999999999998887765443 55333 36665443
No 306
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=70.53 E-value=16 Score=29.24 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=26.3
Q ss_pred cEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe
Q 025474 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs 137 (252)
++-|.+|--+-||+|....+.+.++.. +...+++|.-+.
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 455677779999999966555655544 444467776654
No 307
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=70.24 E-value=5.9 Score=33.21 Aligned_cols=42 Identities=7% Similarity=0.071 Sum_probs=29.8
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHH-HHcHHHHHhC-CCEEEEEe
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYL-AAKKDVMDAS-GVALVLIG 137 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L-~~~~~~l~~~-Gv~vV~Vs 137 (252)
+.|+.|+.|--+.||+|.+.-+.+ .++.+++-+. .++++...
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 568888888899999999988765 4555555333 46665543
No 308
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=67.79 E-value=20 Score=31.18 Aligned_cols=61 Identities=15% Similarity=0.119 Sum_probs=38.9
Q ss_pred cEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCC---------------HHHHHHHHHHhCCC-c--e-ee
Q 025474 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS---------------VEQARTFSEQTKFK-G--E-VY 158 (252)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~---------------~~~~~~f~e~~~~~-f--p-ll 158 (252)
++.|..|-..+||+|..--.-|.+...+ .|+..+.+..+. .+..+++.++++.. . | ++
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI~ 119 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQK---GDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAI 119 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHH---TSSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhcc---CCeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEEE
Confidence 3788889999999999888888776543 456444554321 22334466666653 4 5 66
Q ss_pred ecC
Q 025474 159 ADP 161 (252)
Q Consensus 159 ~Dp 161 (252)
.|-
T Consensus 120 Ing 122 (270)
T 2axo_A 120 LNG 122 (270)
T ss_dssp ETT
T ss_pred ECC
Confidence 663
No 309
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=65.34 E-value=17 Score=29.78 Aligned_cols=56 Identities=9% Similarity=0.099 Sum_probs=39.0
Q ss_pred CcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
.|.++++|-..||..|.+.+..+.+...+++.+ +.++.|..+..+ .....+.+++.
T Consensus 131 ~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~~~-~~~~l~~fgl~ 186 (227)
T 4f9z_D 131 IQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGMKE-NGKVISFFKLK 186 (227)
T ss_dssp CCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTSGG-GHHHHHHTTCC
T ss_pred CceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCccHh-HHHHHHHcCCC
Confidence 366777777789999999999999988888765 777777765422 22344555653
No 310
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=57.83 E-value=21 Score=32.43 Aligned_cols=58 Identities=9% Similarity=0.140 Sum_probs=30.4
Q ss_pred CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCE---EEEEeC---CCHHHH-HHHHHHhCC-Cce-eeecC
Q 025474 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVA---LVLIGP---GSVEQA-RTFSEQTKF-KGE-VYADP 161 (252)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~---vV~Vs~---~~~~~~-~~f~e~~~~-~fp-ll~Dp 161 (252)
..+ |++|. ..|||+|.+-...| |++.|+. +-++.. +...++ ++..+..+. .+| |+.|-
T Consensus 260 ~~~-VvVYs-k~~CPyC~~Ak~~L------L~~~gV~y~eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVFI~G 326 (362)
T 2jad_A 260 ENE-IFVAS-KTYCPYSHAALNTL------FEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYING 326 (362)
T ss_dssp TCS-EEEEE-CTTCHHHHHHHHHH------HTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEEETT
T ss_pred cCC-EEEEE-cCCCcchHHHHHHH------HHHcCCCcceEEEEEeccccCCHHHHHHHHHHHCCCCcCEEEECC
Confidence 344 44444 58999999876533 2334432 222232 222333 455555666 477 66664
No 311
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=56.66 E-value=22 Score=28.61 Aligned_cols=56 Identities=11% Similarity=0.090 Sum_probs=38.2
Q ss_pred EEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCC----C-----H-------HHHHHHHHHhCCCce
Q 025474 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----S-----V-------EQARTFSEQTKFKGE 156 (252)
Q Consensus 100 vlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~----~-----~-------~~~~~f~e~~~~~fp 156 (252)
-|.+|.-+.||+|..-.+.|.++..++. .+++|.-+..+ . + ...+...+.+|++|.
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~-~~v~v~~~p~~L~~~~~~~~~~~~~~~~~~~~~r~a~~~G~~f~ 75 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLP-GVIQFEYVVGGLAPDTNLPMPPEMQQKLEGIWKQIETQLGTKFN 75 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSC-TTSEEEEEECCSSCSCCCBCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCC-CCceEEEEecccccCCCCCCCHHHHHHHHHHHHHHHHHHCCccc
Confidence 4667788999999999999988877763 46777655432 1 1 134455667787764
No 312
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=53.58 E-value=16 Score=34.49 Aligned_cols=18 Identities=33% Similarity=0.547 Sum_probs=13.1
Q ss_pred EcCCCCHhHHHHHHHHHH
Q 025474 104 ARHFGCVLCRKRADYLAA 121 (252)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~ 121 (252)
|-..|||+|.+--.-|.+
T Consensus 23 y~~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 23 FSKTTCPYCKKVKDVLAE 40 (598)
T ss_dssp EECTTCHHHHHHHHHHHH
T ss_pred EECCCChhHHHHHHHHHH
Confidence 446799999976666654
No 313
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=51.96 E-value=12 Score=33.93 Aligned_cols=40 Identities=13% Similarity=0.256 Sum_probs=34.6
Q ss_pred HHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCc
Q 025474 116 ADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (252)
Q Consensus 116 l~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~f 155 (252)
.+...++...++++|++|+.||-+..+-++.++++.++.+
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y 262 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNY 262 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSC
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCccc
Confidence 3667777888999999999999999999999999977643
No 314
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=51.07 E-value=17 Score=27.64 Aligned_cols=38 Identities=3% Similarity=0.072 Sum_probs=30.4
Q ss_pred HHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 117 ~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
.+|..+.+.+++.|+.+|+|...+.+..++.+...|++
T Consensus 61 ~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~GLp 98 (120)
T 3ghf_A 61 VNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRMGLP 98 (120)
T ss_dssp CCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHCCCC
Confidence 35777788889999999999988766677777777776
No 315
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=46.54 E-value=15 Score=32.68 Aligned_cols=34 Identities=12% Similarity=0.148 Sum_probs=30.4
Q ss_pred HHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHH
Q 025474 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQ 150 (252)
Q Consensus 117 ~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~ 150 (252)
++..++...++++|++|++||.+..+-++.|++.
T Consensus 146 ~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~ 179 (327)
T 4as2_A 146 SGQRELYNKLMENGIEVYVISAAHEELVRMVAAD 179 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhh
Confidence 4566778889999999999999999999999987
No 316
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=44.86 E-value=71 Score=25.33 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=26.9
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs 137 (252)
|.+|.-+-||+|..-.+.|.++.+++ +++|.-..
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~---~~~v~~~p 36 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDY---GLTIRYNA 36 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHH---CCEEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHc---CCeEEEEe
Confidence 56777999999999999999887765 56665543
No 317
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=44.85 E-value=41 Score=26.60 Aligned_cols=38 Identities=8% Similarity=-0.114 Sum_probs=31.4
Q ss_pred HHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 117 ~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
+...+...++++.|++++.|+.+....++.+.+.+++.
T Consensus 95 ~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 95 VQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 44555567778899999999999988899999998876
No 318
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=42.25 E-value=54 Score=26.67 Aligned_cols=39 Identities=10% Similarity=0.147 Sum_probs=30.8
Q ss_pred HHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCcee
Q 025474 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEV 157 (252)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpl 157 (252)
..+...+++++|+.++.++-.+...++.+.++.++..++
T Consensus 27 ~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~ 65 (227)
T 1l6r_A 27 AIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPV 65 (227)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeE
Confidence 344456677889999999988888999999988887543
No 319
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=41.74 E-value=60 Score=23.35 Aligned_cols=53 Identities=6% Similarity=0.045 Sum_probs=39.0
Q ss_pred cHHHHHhCCCEEEEEeCCCHH----HHHHHHHHhCCCceeeecCChHHHHHcCCccc
Q 025474 122 KKDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 122 ~~~~l~~~Gv~vV~Vs~~~~~----~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~ 174 (252)
....++...+++|.|..|.++ .+..+++++++|+-.|.+...++-++.|....
T Consensus 24 v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~~~s~~eLG~a~G~~~~ 80 (101)
T 1w41_A 24 SIQYAKMGGAKLIIVARNARPDIKEDIEYYARLSGIPVYEFEGTSVELGTLLGRPHT 80 (101)
T ss_dssp HHHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESSCHHHHHHHTTCSSC
T ss_pred HHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEecCCHHHHHHHhCCCCc
Confidence 345566667899999988653 45567777888876666888899999997643
No 320
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=41.16 E-value=44 Score=24.06 Aligned_cols=54 Identities=6% Similarity=0.047 Sum_probs=39.5
Q ss_pred HcHHHHHhCCCEEEEEeCCCHH----HHHHHHHHhCCCceeeecCChHHHHHcCCccc
Q 025474 121 AKKDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 121 ~~~~~l~~~Gv~vV~Vs~~~~~----~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~ 174 (252)
+....++...+++|.|..|.++ .+..+++++++|+-.+.+...++-++.|....
T Consensus 22 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~~~ 79 (99)
T 3j21_Z 22 ETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVELGTLLGKPFV 79 (99)
T ss_dssp HHHHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEEECCCSCGGGGTTCSTTC
T ss_pred HHHHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHHCCCCC
Confidence 3345566667899999988653 45566788888877777788888888887643
No 321
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=40.34 E-value=39 Score=26.27 Aligned_cols=42 Identities=7% Similarity=0.069 Sum_probs=32.0
Q ss_pred HHHcHHHHHhCCCEEEEEeCCC---HHHHHHHHHHhCCCceeeec
Q 025474 119 LAAKKDVMDASGVALVLIGPGS---VEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Vs~~~---~~~~~~f~e~~~~~fpll~D 160 (252)
..+...+++++|..|+.++.-+ ...+..|.++++++++.+.+
T Consensus 29 ~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~ 73 (142)
T 2obb_A 29 AVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANK 73 (142)
T ss_dssp HHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEc
Confidence 3445556788999998888765 46788899999999886654
No 322
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=40.10 E-value=29 Score=23.71 Aligned_cols=28 Identities=21% Similarity=0.224 Sum_probs=24.6
Q ss_pred EEEEeCCCHHHHHHHHHHhCCCceeeec
Q 025474 133 LVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 133 vV~Vs~~~~~~~~~f~e~~~~~fpll~D 160 (252)
=|.|.++.....+++.++++++|.|+.+
T Consensus 50 dI~V~p~~~~~f~~~L~~~~I~y~Vlie 77 (78)
T 2gjf_A 50 VILIPSDMVEWFLEMLKAKGIPFTVYVE 77 (78)
T ss_dssp EEEECTTSHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEECHHHHHHHHHHHHHCCCcEEEEeC
Confidence 3688999999999999999999998765
No 323
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=39.71 E-value=98 Score=28.59 Aligned_cols=58 Identities=9% Similarity=0.040 Sum_probs=43.3
Q ss_pred HHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeeecCC---------hHHHHHcCCcc
Q 025474 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPN---------HSSYEALSFVS 173 (252)
Q Consensus 115 el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll~Dp~---------~~ly~alGv~~ 173 (252)
-+..|+++.++|++.|..++.+.-+..+.+.++++++++. .|+.+.+ ..+.+++|+..
T Consensus 90 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~V~~~~~~~~~~~~~~~~v~~~lgi~~ 156 (482)
T 2xry_A 90 MLKGLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAG-TLVTDFSPLRIKNQWIEKVISGISIPF 156 (482)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCS-EEEEECCCSHHHHHHHHHHHHHCCSCE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHHHcCCC-EEEEecccchhHHHHHHHHHHHcCCEE
Confidence 4567888899999999999988766668899999998875 3444432 34556678753
No 324
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=39.29 E-value=1.2e+02 Score=26.47 Aligned_cols=60 Identities=12% Similarity=0.217 Sum_probs=44.0
Q ss_pred HHHHHHcHHHHHhCCCEEEEEeC--CCHHHHHHHHHHhCCCceeeecCC------hHHHHHcCCcccc
Q 025474 116 ADYLAAKKDVMDASGVALVLIGP--GSVEQARTFSEQTKFKGEVYADPN------HSSYEALSFVSGV 175 (252)
Q Consensus 116 l~~L~~~~~~l~~~Gv~vV~Vs~--~~~~~~~~f~e~~~~~fpll~Dp~------~~ly~alGv~~~~ 175 (252)
+.+.-+....+.+.|+..|.+-. .+.+.+++|.+...-+.|++.-|. .+=.+++|+..-.
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~ 236 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVI 236 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEE
Confidence 46666667778999999999954 457899999999875567665443 4456778887644
No 325
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=38.06 E-value=39 Score=26.29 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=30.2
Q ss_pred HHHHHcHHHHHhCCCEEEEEeCCC-HHHHHHHHHHhCCC
Q 025474 117 DYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFK 154 (252)
Q Consensus 117 ~~L~~~~~~l~~~Gv~vV~Vs~~~-~~~~~~f~e~~~~~ 154 (252)
+...+...+++++|++++.++-.+ ...++.+.+..++.
T Consensus 71 ~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 71 PEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp TTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred hhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 345555667778899999999888 68888888888876
No 326
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=37.39 E-value=54 Score=24.59 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=29.2
Q ss_pred HHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 120 ~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
.+...+++++|++++.++-.+...++.+.+++++.
T Consensus 42 ~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 76 (162)
T 2p9j_A 42 GIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE 76 (162)
T ss_dssp HHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH
Confidence 45566678899999999999888899999988775
No 327
>1dnp_A DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon, lyase (carbon-carbon); HET: DNA FAD MHF; 2.30A {Escherichia coli} SCOP: a.99.1.1 c.28.1.1
Probab=35.96 E-value=71 Score=29.64 Aligned_cols=64 Identities=9% Similarity=0.115 Sum_probs=43.2
Q ss_pred CcEEEEEEcCCC-------CHhH-HHHHHHHHHcHHHHHhCCCEEEEEeC----CCHHHHHHHHHHhCCCceeeecC
Q 025474 97 RKAVVAFARHFG-------CVLC-RKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYADP 161 (252)
Q Consensus 97 ~~vvlvF~R~~~-------Cp~C-~~el~~L~~~~~~l~~~Gv~vV~Vs~----~~~~~~~~f~e~~~~~fpll~Dp 161 (252)
++++.+|..-.. .+.- .--+..|+++..+|++.|..++.+.. +..+.+.++++++++. .|+.|.
T Consensus 28 ~~v~~vfi~dp~~~~~~~~~~~r~~fl~~sL~~L~~~L~~~G~~L~v~~~~~~g~~~~~l~~l~~~~~~~-~v~~~~ 103 (471)
T 1dnp_A 28 ARVLALYIATPRQWATHNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVT-HLFYNY 103 (471)
T ss_dssp SEEEEEEEECHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHHHTCC-EEEEEC
T ss_pred CCEEEEEEECchhhccCCCCHHHHHHHHHHHHHHHHHHHHCCCeEEEEEccCCCCHHHHHHHHHHHcCCC-EEEEec
Confidence 477777775321 1111 22456788889999999999999843 3446788899998875 466643
No 328
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=35.76 E-value=33 Score=26.73 Aligned_cols=40 Identities=10% Similarity=0.024 Sum_probs=31.0
Q ss_pred HHHHHcHHHHHhCCCEEEEEeCC---------------CHHHHHHHHHHhCCCce
Q 025474 117 DYLAAKKDVMDASGVALVLIGPG---------------SVEQARTFSEQTKFKGE 156 (252)
Q Consensus 117 ~~L~~~~~~l~~~Gv~vV~Vs~~---------------~~~~~~~f~e~~~~~fp 156 (252)
+...+...+++++|+++++++-. ..+.++...+.+++.|+
T Consensus 45 pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd 99 (176)
T 2fpr_A 45 PGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFD 99 (176)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred ccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCee
Confidence 44555666778899999999987 34677888888898886
No 329
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=34.80 E-value=66 Score=25.46 Aligned_cols=59 Identities=7% Similarity=0.002 Sum_probs=36.4
Q ss_pred CCCc-EEecCCCCeEeCCCccC--CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC
Q 025474 75 LDTV-KVYDVNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 75 ap~f-~l~d~~G~~v~ls~l~~--~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~ 138 (252)
..++ .+.+.+|..+....+.. +.+.+|+|+.+.++..- .+....+.|.+.|..|+++..
T Consensus 16 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 16 YQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp GGGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHHTTEEEEEECC
T ss_pred cCCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhh-----HHHHHHHHHHhCCCcEEEeCC
Confidence 3344 66777888876544322 23567777777664322 223445567778999999964
No 330
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=34.55 E-value=99 Score=29.06 Aligned_cols=63 Identities=17% Similarity=0.010 Sum_probs=43.3
Q ss_pred CcEEEEEEcCCC--C----Hh-HHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeeecC
Q 025474 97 RKAVVAFARHFG--C----VL-CRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (252)
Q Consensus 97 ~~vvlvF~R~~~--C----p~-C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll~Dp 161 (252)
.+++.+|..-.. - +. -+--+..|.++..+|++.|..++++.-+..+. .++++++++.- |+.|-
T Consensus 68 ~pVl~vfildp~~~~~~~~~~r~~FL~~sL~dL~~~L~~lG~~L~v~~G~p~~v-~~L~~~~~a~~-V~~d~ 137 (506)
T 3umv_A 68 SPLAVAFALFPRPFLLSARRRQLGFLLRGLRRLAADAAARHLPFFLFTGGPAEI-PALVQRLGAST-LVADF 137 (506)
T ss_dssp CCEEEEEECCCTTCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCTTHH-HHHHHHTTCSE-EEECC
T ss_pred CCEEEEEeccchhhccCCCHHHHHHHHHHHHHHHHHHHHcCCceEEEecChHHH-HHHHHhcCCCE-EEecc
Confidence 367777765433 1 11 22345678889999999999999887666667 99999987663 44553
No 331
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=32.88 E-value=65 Score=24.44 Aligned_cols=35 Identities=9% Similarity=0.100 Sum_probs=29.0
Q ss_pred HHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 120 ~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
.+...++++.|++++.++.++.+.++...+..++.
T Consensus 90 ~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~ 124 (216)
T 2pib_A 90 REALEFVKSKRIKLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChH
Confidence 44556778899999999999988888888888876
No 332
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=32.32 E-value=76 Score=30.00 Aligned_cols=45 Identities=7% Similarity=0.011 Sum_probs=36.0
Q ss_pred HHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeeec
Q 025474 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 115 el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll~D 160 (252)
-+..|+++.++|++.|..++.+..+..+.+.++++++++. .|+.+
T Consensus 87 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~v~~~ 131 (543)
T 2wq7_A 87 LQQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVE-MLTFE 131 (543)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHTTEE-EEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCC-EEEEe
Confidence 4667888899999999999988766668899999998765 35554
No 333
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=32.23 E-value=1.5e+02 Score=21.81 Aligned_cols=54 Identities=15% Similarity=0.169 Sum_probs=36.9
Q ss_pred HHHHHcHHHH-HhCCCEEEEEeCCCH---HHHHHHHHHhCCCc-eeeecCChHHHHHcC
Q 025474 117 DYLAAKKDVM-DASGVALVLIGPGSV---EQARTFSEQTKFKG-EVYADPNHSSYEALS 170 (252)
Q Consensus 117 ~~L~~~~~~l-~~~Gv~vV~Vs~~~~---~~~~~f~e~~~~~f-pll~Dp~~~ly~alG 170 (252)
++|.+..+++ ++-++.+++|..++. +.+-.|.+..|... -++.|.++.-.+.|.
T Consensus 36 qelkdsieelvkkynativvvvvddkewaekairfvkslgaqvliiiydqdqnrleefs 94 (134)
T 2l69_A 36 QELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQDQNRLEEFS 94 (134)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEEEEeCchhHHHHHH
Confidence 3455554554 455888888888886 35667888888875 477888876655543
No 334
>3hug_B Probable conserved membrane protein; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=31.79 E-value=23 Score=26.62 Aligned_cols=23 Identities=22% Similarity=0.411 Sum_probs=19.7
Q ss_pred CCCHhHHHHHHHHHHcHHHHHhC
Q 025474 107 FGCVLCRKRADYLAAKKDVMDAS 129 (252)
Q Consensus 107 ~~Cp~C~~el~~L~~~~~~l~~~ 129 (252)
..|+-|+.++.+|++....+...
T Consensus 52 a~Cp~CR~ev~eL~~~~a~L~~l 74 (108)
T 3hug_B 52 AGCPECRGAVTELCGVPALLSQL 74 (108)
T ss_dssp HTCHHHHHHHHHHTTHHHHHTTS
T ss_pred HhCHHHHHHHHHHHHHHHHHhcC
Confidence 48999999999999988877654
No 335
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=31.17 E-value=75 Score=28.95 Aligned_cols=57 Identities=25% Similarity=0.183 Sum_probs=42.7
Q ss_pred HHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeeecCC---------hHHHHHcCCc
Q 025474 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPN---------HSSYEALSFV 172 (252)
Q Consensus 115 el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll~Dp~---------~~ly~alGv~ 172 (252)
-+..|+++.++|++.|..++.+..+..+.+.++++++++. .|+.|.+ ..+.+.+|+.
T Consensus 50 l~~sL~~l~~~L~~~g~~l~~~~g~~~~~l~~l~~~~~~~-~v~~~~~~~~~~~~rd~~v~~~l~i~ 115 (420)
T 2j07_A 50 FLENVRALREAYRARGGALWVLEGLPWEKVPEAARRLKAK-AVYALTSHTPYGRYRDGRVREALPVP 115 (420)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCS-EEEEECCCSHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCC-EEEEecccChhHHHHHHHHHHHcCCe
Confidence 4567888899999999999998766668899999998875 3666433 4455556664
No 336
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=30.68 E-value=84 Score=22.83 Aligned_cols=53 Identities=11% Similarity=0.097 Sum_probs=39.1
Q ss_pred cHHHHHhCCCEEEEEeCCCH----HHHHHHHHHhCCCceeeecCChHHHHHcCCccc
Q 025474 122 KKDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 122 ~~~~l~~~Gv~vV~Vs~~~~----~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~ 174 (252)
....++...+.+|.|..|-+ ..+..+++.+++|+-.|.+...++-++.|....
T Consensus 30 v~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~A~Gk~~~ 86 (105)
T 3u5e_c 30 TVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFR 86 (105)
T ss_dssp HHHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCSSC
T ss_pred HHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHhCCccc
Confidence 34456666688999988754 356677788888876677888899999997643
No 337
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=30.44 E-value=72 Score=26.73 Aligned_cols=52 Identities=12% Similarity=0.133 Sum_probs=31.5
Q ss_pred HcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC--ce-eeecCChHHHHHcCCc
Q 025474 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GE-VYADPNHSSYEALSFV 172 (252)
Q Consensus 121 ~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~--fp-ll~Dp~~~ly~alGv~ 172 (252)
+....+++.|+++..++.++...++...+..++. |. ++.++.....+.++..
T Consensus 170 ~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~K~~~~~~l~~~ 224 (287)
T 3a1c_A 170 PAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK 224 (287)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT
T ss_pred HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecChHHHHHHHHHHhcC
Confidence 3445566778888888887777777777777764 22 2223333444455544
No 338
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=29.60 E-value=76 Score=25.22 Aligned_cols=40 Identities=18% Similarity=0.095 Sum_probs=31.4
Q ss_pred HHHHHcHHHHHhCCCEEEEEeCCC---------------HHHHHHHHHHhCCCce
Q 025474 117 DYLAAKKDVMDASGVALVLIGPGS---------------VEQARTFSEQTKFKGE 156 (252)
Q Consensus 117 ~~L~~~~~~l~~~Gv~vV~Vs~~~---------------~~~~~~f~e~~~~~fp 156 (252)
+...+...+++++|++++.++-.+ .+.++...++.++.|.
T Consensus 53 pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~ 107 (211)
T 2gmw_A 53 DGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD 107 (211)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred cCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceE
Confidence 445566677888999999999988 3677788888888765
No 339
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=28.91 E-value=1.4e+02 Score=25.80 Aligned_cols=64 Identities=8% Similarity=-0.039 Sum_probs=40.9
Q ss_pred cEEEEEEcCCCCHhHHHHHHHHHHcHHHHHh-CCCEEEEEeCCCHHHHHH-HHHHhCCC--ce--eeecC
Q 025474 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQART-FSEQTKFK--GE--VYADP 161 (252)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~-~Gv~vV~Vs~~~~~~~~~-f~e~~~~~--fp--ll~Dp 161 (252)
+..+++|-..+|+.|.+.+..|.+...+++. ..+..+.|..+.-....+ |.+.+++. +| ++.++
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~~~P~~~i~~~ 315 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNV 315 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCTTSCEEEEEES
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCCCccCCcEEEEec
Confidence 4444456678999999999999999888874 456677666654332221 22555554 45 44555
No 340
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=28.85 E-value=1.1e+02 Score=22.15 Aligned_cols=53 Identities=9% Similarity=0.064 Sum_probs=38.6
Q ss_pred cHHHHHhCCCEEEEEeCCCH----HHHHHHHHHhCCCceeeecCChHHHHHcCCccc
Q 025474 122 KKDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 122 ~~~~l~~~Gv~vV~Vs~~~~----~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~ 174 (252)
....++...+.+|.|..|-. ..+..+++.+++|+-.|.+...++-++.|....
T Consensus 30 v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~~~ 86 (104)
T 4a18_G 30 TIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVELGTACGKYHR 86 (104)
T ss_dssp HHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCSSC
T ss_pred HHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHhCCccC
Confidence 34556666788999988754 355667777777766577888899999997643
No 341
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=28.80 E-value=72 Score=24.11 Aligned_cols=37 Identities=8% Similarity=0.103 Sum_probs=30.3
Q ss_pred HHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 118 YLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 118 ~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
...+...++++.|++++.++..+.+.++...+.+++.
T Consensus 93 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 129 (214)
T 3e58_A 93 DVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQ 129 (214)
T ss_dssp THHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred hHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcH
Confidence 3455567788899999999999988889988888874
No 342
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=28.37 E-value=46 Score=26.20 Aligned_cols=37 Identities=11% Similarity=0.149 Sum_probs=29.7
Q ss_pred HHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCc
Q 025474 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (252)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~f 155 (252)
..+....++++|+++..|+.++...++...+++++..
T Consensus 91 ~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~ 127 (225)
T 1nnl_A 91 IRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA 127 (225)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCc
Confidence 4445667778899999999888888888888888863
No 343
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=28.32 E-value=1.1e+02 Score=22.28 Aligned_cols=52 Identities=4% Similarity=-0.102 Sum_probs=38.6
Q ss_pred HHHHHhCCCEEEEEeCCCHH----HHHHHHHHhCCCceeeecCChHHHHHcCCccc
Q 025474 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 123 ~~~l~~~Gv~vV~Vs~~~~~----~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~ 174 (252)
...++...+.+|.|..|-+. .+..+++++++|+-.+.+...++-++.|....
T Consensus 30 ~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG~a~G~~~~ 85 (110)
T 3cpq_A 30 IKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLELGAVCGKPFP 85 (110)
T ss_dssp HHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHHHHHHTTCSSC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHHHHHHhCCccc
Confidence 44455666889999988653 45567788888876776888899999998643
No 344
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=28.21 E-value=84 Score=24.29 Aligned_cols=65 Identities=14% Similarity=0.238 Sum_probs=43.5
Q ss_pred CcEEecCCCCeEeCCCcc-C-CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 77 TVKVYDVNGNAIPISDLW-K-DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 77 ~f~l~d~~G~~v~ls~l~-~-~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
..-+.|.||..+. ...+ . .+..+-.|... ..+ ...+++++|++++.++.++...++.+.+++++.
T Consensus 13 k~vifD~DGTL~d-~~~~~~~~~~~~~~~~~~-------~~~-----~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~ 79 (176)
T 3mmz_A 13 DAVVLDFDGTQTD-DRVLIDSDGREFVSVHRG-------DGL-----GIAALRKSGLTMLILSTEQNPVVAARARKLKIP 79 (176)
T ss_dssp SEEEECCTTTTSC-SCCEECTTCCEEEEEEHH-------HHH-----HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred CEEEEeCCCCcCc-CCEeecCCccHhHhcccc-------cHH-----HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe
Confidence 3567899997776 3332 1 12223222211 111 466788999999999999888999999999987
No 345
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=28.03 E-value=44 Score=22.70 Aligned_cols=28 Identities=21% Similarity=0.224 Sum_probs=24.2
Q ss_pred EEEEeCCCHHHHHHHHHHhCCCceeeec
Q 025474 133 LVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 133 vV~Vs~~~~~~~~~f~e~~~~~fpll~D 160 (252)
=|.|.+......+++.+.++++|.++.+
T Consensus 42 di~V~p~~~~~f~~~L~~~~i~~~v~i~ 69 (79)
T 1vjq_A 42 VILIPSDMVEWFLEMLKAKGIPFTVYVE 69 (79)
T ss_dssp EEEECGGGHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEECHHHHHHHHHHHHHCCCcEEEEeh
Confidence 3678888889999999999999998765
No 346
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=27.91 E-value=31 Score=27.67 Aligned_cols=85 Identities=7% Similarity=0.022 Sum_probs=58.8
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhC
Q 025474 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK 152 (252)
Q Consensus 73 ~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~ 152 (252)
+.+-.+.+.+. | ..+.+.-...+=+||.+-+-.=|-+.-...+.+++.+++-+.+-+||+|...+.-+-+.|.+.
T Consensus 63 e~a~~l~~~~~-G--~~~~~~~~~~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCFms~F~kagW~~~-- 137 (157)
T 2r47_A 63 SKARKLEVTEY-G--VELGEISPGNVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCYMDMFARAGWYEL-- 137 (157)
T ss_dssp GGCEEEEEETT-E--EEEEEECCCCEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEETTHHHHTTHHHH--
T ss_pred hHceEEEEecC-c--eEeccccCCCCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEhHHHHHHcCCCcc--
Confidence 34455566653 4 454454324677788887776666666666777776666555778999999999877788776
Q ss_pred CCceeeecCC
Q 025474 153 FKGEVYADPN 162 (252)
Q Consensus 153 ~~fpll~Dp~ 162 (252)
++|+.+.|.+
T Consensus 138 IdFD~iID~~ 147 (157)
T 2r47_A 138 LDFDCVINAD 147 (157)
T ss_dssp SCCSEEEEEE
T ss_pred CCccEEEEcc
Confidence 7888888743
No 347
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=27.89 E-value=1.1e+02 Score=24.52 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=29.8
Q ss_pred HHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceee
Q 025474 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVY 158 (252)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll 158 (252)
..+...+++++|+.++.++--+...+..+.+..+++.+++
T Consensus 25 ~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i 64 (231)
T 1wr8_A 25 ALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVV 64 (231)
T ss_dssp HHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEE
Confidence 3444556778899998888878888888888888776543
No 348
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=26.43 E-value=79 Score=27.19 Aligned_cols=66 Identities=12% Similarity=0.107 Sum_probs=40.9
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccC------CCcEEEEEEcCCCCHhHHHHHHHH----HH---cHHHHH--hCCCEEE
Q 025474 70 DTKNLLDTVKVYDVNGNAIPISDLWK------DRKAVVAFARHFGCVLCRKRADYL----AA---KKDVMD--ASGVALV 134 (252)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~------~~~vvlvF~R~~~Cp~C~~el~~L----~~---~~~~l~--~~Gv~vV 134 (252)
+..+.+|-|.+.|..|..+-...--. +..+..+|+ +++++..+ .. ..+... ..+++|+
T Consensus 9 ekL~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~-------s~~dA~~~L~~lk~~~~~np~~~~~~~~~kV~ 81 (252)
T 4ev1_A 9 EKLDSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM-------SRQEAQAFINELRNAKNKDPKMQEIVKSLQVT 81 (252)
T ss_dssp HHHTTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES-------CHHHHHHHHHHHHHCSSCCHHHHHHHTTCEEE
T ss_pred HHhcCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe-------cHHHHHHHHHHHHhccccCchhhhhccCceEE
Confidence 34567899999999999876553210 234555554 55555544 33 223121 3479999
Q ss_pred EEeCCCHH
Q 025474 135 LIGPGSVE 142 (252)
Q Consensus 135 ~Vs~~~~~ 142 (252)
.|+-+..-
T Consensus 82 ~vsL~~vy 89 (252)
T 4ev1_A 82 AVPLGVIY 89 (252)
T ss_dssp EEEHHHHH
T ss_pred EeeHHHHH
Confidence 99988653
No 349
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=26.03 E-value=1.1e+02 Score=23.56 Aligned_cols=34 Identities=6% Similarity=0.039 Sum_probs=28.8
Q ss_pred HcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 121 ~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
+...+++++|+.++.++-.+...++.+.++.++.
T Consensus 42 ~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~ 75 (180)
T 1k1e_A 42 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK 75 (180)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc
Confidence 4566678899999999999888899999998876
No 350
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=26.02 E-value=88 Score=29.02 Aligned_cols=46 Identities=15% Similarity=0.206 Sum_probs=36.9
Q ss_pred HHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeeecC
Q 025474 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (252)
Q Consensus 115 el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll~Dp 161 (252)
-+..|+++.++|++.|..++.+..+..+.+.++++++++. .|+.+.
T Consensus 55 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~v~~~~ 100 (484)
T 1owl_A 55 LQGCLQELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAE-AVYWNQ 100 (484)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEESCHHHHHHHHHHHTTCS-EEEEEC
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCC-EEEEec
Confidence 4567888899999999999998766668899999998875 366643
No 351
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=25.44 E-value=27 Score=27.66 Aligned_cols=60 Identities=8% Similarity=0.053 Sum_probs=36.1
Q ss_pred EEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC-ceeeecCChHHHH
Q 025474 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GEVYADPNHSSYE 167 (252)
Q Consensus 101 lvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~-fpll~Dp~~~ly~ 167 (252)
+-.|-+..||+|++-.-.|.+ .....+++-|...+. -..|.+.+... .|++.|.+..+++
T Consensus 4 m~LY~~~~sP~~~rvr~~L~e-----~gi~~e~~~v~~~~~--~~~~~~~nP~g~vPvL~~~~~~l~E 64 (210)
T 4hoj_A 4 MTLYSGITCPFSHRCRFVLYE-----KGMDFEIKDIDIYNK--PEDLAVMNPYNQVPVLVERDLVLHE 64 (210)
T ss_dssp CEEEECTTCHHHHHHHHHHHH-----HTCCCEEEECCTTSC--CHHHHHHCTTCCSCEEEETTEEEES
T ss_pred EEEecCCCChHHHHHHHHHHH-----cCCCCEEEEeCCCCC--CHHHHHHCCCCCCcEEEECCEEEec
Confidence 445677899999986555433 233345666655432 23566665543 6888887755443
No 352
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=25.37 E-value=1.5e+02 Score=20.37 Aligned_cols=51 Identities=10% Similarity=0.094 Sum_probs=36.5
Q ss_pred HHHHHhCCCEEEEEeCCCH----HHHHHHHHHhCCCceeeecCChHHHHHcCCccc
Q 025474 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 123 ~~~l~~~Gv~vV~Vs~~~~----~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~ 174 (252)
...++...+++|.|..|-. ..+..+++++++|+-.+. ...++-++.|....
T Consensus 20 ~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~-sk~eLG~a~Gk~~~ 74 (82)
T 3v7e_A 20 VKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVE-SMKKLGKACGIEVG 74 (82)
T ss_dssp HHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES-CHHHHHHHHTCSSC
T ss_pred HHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC-CHHHHHHHhCCCCC
Confidence 4455566688999988753 355667788899886654 66788888887654
No 353
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=25.36 E-value=38 Score=24.14 Aligned_cols=39 Identities=8% Similarity=-0.007 Sum_probs=28.8
Q ss_pred HHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Q 025474 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (252)
Q Consensus 115 el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~ 153 (252)
-.+...+...++++.|++++.++-.+...++...+..++
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 345667777888899999999998877666666666554
No 354
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=24.90 E-value=1.5e+02 Score=23.23 Aligned_cols=22 Identities=14% Similarity=0.345 Sum_probs=16.6
Q ss_pred HHHcHHHHHhCCCEEEEEeCCC
Q 025474 119 LAAKKDVMDASGVALVLIGPGS 140 (252)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Vs~~~ 140 (252)
+.+....+++.|+.|.+|+.++
T Consensus 128 ~~~~~~~~~~~~i~v~~igig~ 149 (218)
T 3ibs_A 128 AVEAAKAAAEKGIQVSVLGVGM 149 (218)
T ss_dssp HHHHHHHHHTTTEEEEEEEESC
T ss_pred HHHHHHHHHhcCCEEEEEEecC
Confidence 4445556778899999998876
No 355
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=24.79 E-value=1.3e+02 Score=22.28 Aligned_cols=52 Identities=12% Similarity=0.049 Sum_probs=39.7
Q ss_pred HHHHHhCCCEEEEEeCCCH----HHHHHHHHHhCCCceeeecCChHHHHHcCCccc
Q 025474 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (252)
Q Consensus 123 ~~~l~~~Gv~vV~Vs~~~~----~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~~ 174 (252)
...++...+.+|.|..|-+ ..+..+++.+++|+-.+.+...++-++.|....
T Consensus 35 ~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~A~Gk~~~ 90 (112)
T 3iz5_f 35 LKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKYYR 90 (112)
T ss_dssp HHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTHHHHHCTTCS
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHHHhCCccc
Confidence 4455666688999988754 356778899999887777888899999998643
No 356
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=24.71 E-value=2.2e+02 Score=22.97 Aligned_cols=38 Identities=16% Similarity=-0.059 Sum_probs=29.7
Q ss_pred HHHHHcHHHHHhCCC--EEEEEeCCCHHHHHHHHHHhCCC
Q 025474 117 DYLAAKKDVMDASGV--ALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 117 ~~L~~~~~~l~~~Gv--~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
+.+.+....+++.|+ ++..++.+....++...+..++.
T Consensus 145 p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~ 184 (282)
T 3nuq_A 145 IPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIA 184 (282)
T ss_dssp HHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCT
T ss_pred hhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcc
Confidence 345556677888999 99999988888888888887764
No 357
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=24.70 E-value=77 Score=24.58 Aligned_cols=38 Identities=5% Similarity=0.039 Sum_probs=30.6
Q ss_pred HHHHHcHHHHHhCCCEEEEEeCCCH---HHHHHHHHHhCCC
Q 025474 117 DYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKFK 154 (252)
Q Consensus 117 ~~L~~~~~~l~~~Gv~vV~Vs~~~~---~~~~~f~e~~~~~ 154 (252)
+...+...+++++|+++.+++-.+. +.++...+..++.
T Consensus 37 ~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 37 KNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp TTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred cCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 4556667778889999999997665 7888888998875
No 358
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=24.52 E-value=97 Score=24.63 Aligned_cols=36 Identities=8% Similarity=0.051 Sum_probs=26.4
Q ss_pred cceEEEEeCCCCeEEEEEe---CCCCCCCCCHHHHHHHhh
Q 025474 215 QGGIIVAGPGKSNISYIHR---DKEAGDDPDIQDILKACC 251 (252)
Q Consensus 215 ~GG~fVid~ggg~I~~~h~---~~~~~D~p~~~eIL~al~ 251 (252)
.|..++++++ |++.|... .....+.+.+.++|+.+.
T Consensus 105 ~Pt~v~l~~d-G~~v~~~ty~p~~~~~~~~~f~~~L~~v~ 143 (173)
T 3ira_A 105 WPLNIIMTPG-KKPFFAGTYIPKNTRFNQIGMLELVPRIK 143 (173)
T ss_dssp SSEEEEECTT-SCEEEEESSCCSSCBTTBCCHHHHHHHHH
T ss_pred CcceeeECCC-CCceeeeeeCCCCcCCCCCCHHHHHHHHH
Confidence 6789999988 69998732 223457788999988763
No 359
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=24.38 E-value=84 Score=29.15 Aligned_cols=46 Identities=11% Similarity=0.097 Sum_probs=36.5
Q ss_pred HHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeeec
Q 025474 114 KRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 114 ~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll~D 160 (252)
--+..|+++.++|++.|..++.+..+..+.+.++++++++. .|+.+
T Consensus 62 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~V~~~ 107 (489)
T 1np7_A 62 FLQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAK-TIYYH 107 (489)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTEE-EEEEE
T ss_pred HHHHHHHHHHHHHHHCCCcEEEEECCHHHHHHHHHHHcCCC-EEEEe
Confidence 34667888899999999999988766668889999997764 36655
No 360
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=23.93 E-value=1.7e+02 Score=20.60 Aligned_cols=61 Identities=20% Similarity=0.119 Sum_probs=36.1
Q ss_pred EEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC--ceeeecCC
Q 025474 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GEVYADPN 162 (252)
Q Consensus 99 vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~--fpll~Dp~ 162 (252)
.|++.+.+-- ..-..-+..|.+...++++.|.+++.++..+ .+++..+..++. |+++.|.+
T Consensus 44 ~vvlDls~v~-~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~--~v~~~l~~~gl~~~~~i~~~~~ 106 (117)
T 4hyl_A 44 KMILDLREVS-YMSSAGLRVLLSLYRHTSNQQGALVLVGVSE--EIRDTMEITGFWNFFTACASMD 106 (117)
T ss_dssp EEEEEEEEEE-EECHHHHHHHHHHHHHHHHTTCEEEEECCCH--HHHHHHHHHTCGGGCEEESCHH
T ss_pred eEEEECCCCc-EEcHHHHHHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHhCccceeeecCCHH
Confidence 4555554421 1122335566777777888888888887753 555666666765 56665433
No 361
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=23.84 E-value=57 Score=24.40 Aligned_cols=28 Identities=18% Similarity=0.184 Sum_probs=23.2
Q ss_pred EEEeCCCHHHHHHHHHHhCCCceeeecC
Q 025474 134 VLIGPGSVEQARTFSEQTKFKGEVYADP 161 (252)
Q Consensus 134 V~Vs~~~~~~~~~f~e~~~~~fpll~Dp 161 (252)
|.+..++.|++.+|++++|++|.|.-..
T Consensus 54 v~L~F~skE~AiayAek~G~~y~V~ep~ 81 (106)
T 2jya_A 54 VKLTFETQEQAEAYAQRKGIEYRVILPK 81 (106)
T ss_dssp EEEEESSHHHHHHHHHHHTCEEEECCCT
T ss_pred ceEecCCHHHHHHHHHHcCCEEEEeCCC
Confidence 4567788999999999999999877543
No 362
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=23.83 E-value=94 Score=23.87 Aligned_cols=35 Identities=14% Similarity=0.094 Sum_probs=27.3
Q ss_pred HHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 120 ~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
.+..+++++.|+.++.++.++...++...+..++.
T Consensus 76 ~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 110 (205)
T 3m9l_A 76 VELVRELAGRGYRLGILTRNARELAHVTLEAIGLA 110 (205)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCch
Confidence 44456677889999999888888888888887764
No 363
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=23.55 E-value=87 Score=25.54 Aligned_cols=51 Identities=6% Similarity=0.042 Sum_probs=23.0
Q ss_pred cCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC-CceeeecCC
Q 025474 105 RHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF-KGEVYADPN 162 (252)
Q Consensus 105 R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~-~fpll~Dp~ 162 (252)
...+||+|++-.-.|.+ ....++++-|.... .-..|.+.+.. ..|++.|.+
T Consensus 26 ~~~~sp~~~rv~~~L~~-----~gi~ye~~~v~~~~--~~~~~~~~nP~g~vP~L~~~g 77 (247)
T 2r4v_A 26 SIGNCPFCQRLFMILWL-----KGVKFNVTTVDMTR--KPEELKDLAPGTNPPFLVYNK 77 (247)
T ss_dssp SBCSCHHHHHHHHHHHH-----HTCCCEEEEECCC------------CCSSSCEEEETT
T ss_pred cCCCChhHHHHHHHHHH-----cCCCcEEEEcCccc--chHHHHHhCCCCCCCEEEECC
Confidence 57899999986655543 22234555554431 12234433332 245555543
No 364
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=23.19 E-value=3.3e+02 Score=23.69 Aligned_cols=74 Identities=12% Similarity=0.077 Sum_probs=47.1
Q ss_pred EEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEe-CCCHHHHHHHHHHhCCCce--eeec-----CChHHHHHcCC
Q 025474 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG-PGSVEQARTFSEQTKFKGE--VYAD-----PNHSSYEALSF 171 (252)
Q Consensus 100 vlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs-~~~~~~~~~f~e~~~~~fp--ll~D-----p~~~ly~alGv 171 (252)
+++.-|-.-- -..-+.+--++...+.+.|+.+|.|- ..+.+++++|++..+.|.. +..- .+.+-.+++|+
T Consensus 156 ~~I~ARTDa~--~~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~lGv 233 (298)
T 3eoo_A 156 FVIMARTDAA--AAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKGANV 233 (298)
T ss_dssp SEEEEEECTH--HHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTC
T ss_pred eEEEEeehhh--hhcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHHHcCC
Confidence 4555565432 22334445555667889999988884 4568999999999875542 2211 23456778898
Q ss_pred cccc
Q 025474 172 VSGV 175 (252)
Q Consensus 172 ~~~~ 175 (252)
..-.
T Consensus 234 ~~v~ 237 (298)
T 3eoo_A 234 DIAL 237 (298)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 7654
No 365
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=22.93 E-value=47 Score=26.97 Aligned_cols=21 Identities=33% Similarity=0.344 Sum_probs=17.8
Q ss_pred CCCHhHHHHHHHHHHcHHHHH
Q 025474 107 FGCVLCRKRADYLAAKKDVMD 127 (252)
Q Consensus 107 ~~Cp~C~~el~~L~~~~~~l~ 127 (252)
..|+-|+.++.+|++....+-
T Consensus 33 ~~C~~Cr~~v~~l~~~~~~l~ 53 (195)
T 2q1z_B 33 SLCDECRARAGALDAVGGSLM 53 (195)
T ss_dssp HHCHHHHHHHHHHHHHHHHHH
T ss_pred hHCHHHHHHHHHHHHHHHHHh
Confidence 369999999999999876654
No 366
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=22.87 E-value=1e+02 Score=28.98 Aligned_cols=45 Identities=13% Similarity=0.197 Sum_probs=36.7
Q ss_pred HHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeeec
Q 025474 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 115 el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll~D 160 (252)
-+..|+++.++|++.|..++.+..+..+.+.++++++++. .|+.+
T Consensus 98 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~V~~~ 142 (525)
T 2j4d_A 98 LMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGAR-TVFAH 142 (525)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHHTCS-EEEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHcCCC-EEEEe
Confidence 4667888899999999999988766668899999998875 35555
No 367
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=22.45 E-value=2.3e+02 Score=24.58 Aligned_cols=59 Identities=15% Similarity=0.128 Sum_probs=41.8
Q ss_pred HHHHHHcHHHHHhCCCEEEEEeC--CCHHHHHHHHHHhCCCceeeecC------ChHHHHHcC-Cccc
Q 025474 116 ADYLAAKKDVMDASGVALVLIGP--GSVEQARTFSEQTKFKGEVYADP------NHSSYEALS-FVSG 174 (252)
Q Consensus 116 l~~L~~~~~~l~~~Gv~vV~Vs~--~~~~~~~~f~e~~~~~fpll~Dp------~~~ly~alG-v~~~ 174 (252)
+.+.-+....+++.|+..|.+-. -+.+.+++|.+...-+.|++..+ +.+-.+++| +..-
T Consensus 165 ~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v 232 (290)
T 2hjp_A 165 QQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIV 232 (290)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEE
Confidence 56666667778999999998865 34689999999987557766442 344466677 6543
No 368
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=22.43 E-value=81 Score=24.40 Aligned_cols=36 Identities=11% Similarity=0.203 Sum_probs=27.7
Q ss_pred HHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
+.+..+++++.|+.++.++.++.+.++...+..++.
T Consensus 96 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 96 AVELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp HHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 344456677889999999988888888888887765
No 369
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=22.18 E-value=3.6e+02 Score=23.06 Aligned_cols=61 Identities=10% Similarity=0.076 Sum_probs=44.5
Q ss_pred HHHHHHHcHHHHHhCCCEEEEEeCC-CHHHHHHHHHHhCCCceeeec---CChHHHHHcCCcccc
Q 025474 115 RADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFKGEVYAD---PNHSSYEALSFVSGV 175 (252)
Q Consensus 115 el~~L~~~~~~l~~~Gv~vV~Vs~~-~~~~~~~f~e~~~~~fpll~D---p~~~ly~alGv~~~~ 175 (252)
.+.+.-+....+++.|+..|.+-.- +.+.+++|.+...+|..+..- .+.+=.+++|+..-.
T Consensus 166 ~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~n~~~~~~~~~~~eL~~lGv~~v~ 230 (275)
T 2ze3_A 166 RLAETVRRGQAYADAGADGIFVPLALQSQDIRALADALRVPLNVMAFPGSPVPRALLDAGAARVS 230 (275)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCSSCEEEECCTTSCCHHHHHHTTCSEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcCCCEEEecCCCCCCHHHHHHcCCcEEE
Confidence 4677777777899999998888554 468999999998877654432 244556778887643
No 370
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=22.00 E-value=1.7e+02 Score=24.11 Aligned_cols=40 Identities=13% Similarity=0.038 Sum_probs=29.3
Q ss_pred HcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeeec
Q 025474 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (252)
Q Consensus 121 ~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll~D 160 (252)
+...+++++|+.++.++--+...+..+.++.+++.++++.
T Consensus 28 ~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~ 67 (288)
T 1nrw_A 28 NALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISA 67 (288)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEG
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEc
Confidence 3445567889998877777778888888888887764443
No 371
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=21.94 E-value=1.1e+02 Score=23.58 Aligned_cols=36 Identities=14% Similarity=0.275 Sum_probs=28.4
Q ss_pred HHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
..+....+++.|++++.++..+.+.++...+..++.
T Consensus 101 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 136 (230)
T 3um9_A 101 VPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLT 136 (230)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 344556677889999999999888888888887765
No 372
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=21.74 E-value=41 Score=26.13 Aligned_cols=38 Identities=16% Similarity=0.168 Sum_probs=28.1
Q ss_pred CcEEecCCCCeEeCCCccCCCcEEEEEEcC-CCCHhHHHHHHHHHHcH
Q 025474 77 TVKVYDVNGNAIPISDLWKDRKAVVAFARH-FGCVLCRKRADYLAAKK 123 (252)
Q Consensus 77 ~f~l~d~~G~~v~ls~l~~~~~vvlvF~R~-~~Cp~C~~el~~L~~~~ 123 (252)
.+++.|..|+.+-+ .+| |-|- .|||.|..++.++.+.+
T Consensus 24 ~v~l~d~~Gk~vll-~F~--------~t~Cp~~Cp~~~~~l~~l~~~~ 62 (170)
T 4hde_A 24 PFGTKDLKGKVWVA-DFM--------FTNCQTVCPPMTANMAKLQKMA 62 (170)
T ss_dssp EEEHHHHTTSCEEE-EEE--------CTTCSSSHHHHHHHHHHHHHHH
T ss_pred EEeHHHhCCCEEEE-EEE--------CCCCCCcccHHHHHHHHHHHhh
Confidence 36778888987644 343 4454 59999999999998765
No 373
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=21.70 E-value=1.1e+02 Score=24.11 Aligned_cols=36 Identities=8% Similarity=0.216 Sum_probs=28.6
Q ss_pred HHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
..+...++++.|+++..++.++...++...+..++.
T Consensus 88 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 88 IPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH
Confidence 344556677889999999998888888888888865
No 374
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=21.65 E-value=1.6e+02 Score=24.09 Aligned_cols=61 Identities=7% Similarity=-0.025 Sum_probs=37.7
Q ss_pred CCCCCc-EEecCCCCeEeCCCccC--CCcEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeC
Q 025474 73 NLLDTV-KVYDVNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (252)
Q Consensus 73 ~~ap~f-~l~d~~G~~v~ls~l~~--~~~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~ 138 (252)
-...++ .+...+|..+....+.. +.+.+|+|+.+.++..- .+....+.|.+.|..|+++..
T Consensus 32 ~~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~-----~~~~~~~~l~~~g~~vi~~D~ 95 (342)
T 3hju_A 32 IPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 95 (342)
T ss_dssp CBTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHTTTEEEEEECC
T ss_pred cccccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccc-----hHHHHHHHHHhCCCeEEEEcC
Confidence 344555 67778888876544321 23456777777665332 233445667778999999953
No 375
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=21.03 E-value=1.1e+02 Score=24.00 Aligned_cols=32 Identities=16% Similarity=0.185 Sum_probs=28.1
Q ss_pred HHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 123 KDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 123 ~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
..++++.|++++.|+-++...++.+.+++++.
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~ 86 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT 86 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc
Confidence 56678899999999999888999999998876
No 376
>2e0i_A 432AA long hypothetical deoxyribodipyrimidine PHO; photolyase, FAD, DNA repair, lyase; HET: FAD; 2.80A {Sulfolobus tokodaii}
Probab=20.98 E-value=1.6e+02 Score=26.99 Aligned_cols=64 Identities=13% Similarity=0.103 Sum_probs=42.3
Q ss_pred CCcEEEEEEcCCC-------CHhH--HHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeeecCC
Q 025474 96 DRKAVVAFARHFG-------CVLC--RKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPN 162 (252)
Q Consensus 96 ~~~vvlvF~R~~~-------Cp~C--~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~fpll~Dp~ 162 (252)
+.+++.+|..-.. .... .--+..|+++.++|++.|..++.+..+..+.+.++++ ++. .|+.|.+
T Consensus 26 ~~~v~~vfi~dp~~~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~--~~~-~v~~~~~ 98 (440)
T 2e0i_A 26 CDRVIPVFIADPRQLINNPYKSEFAVSFMINSLLELDDELRKKGSRLNVFFGEAEKVVSRFFN--KVD-AIYVNED 98 (440)
T ss_dssp SSEEEEEEEECHHHHSSCTTCCHHHHHHHHHHHHHHHHHHHTTTCCCEEEESCHHHHHHHHCT--TCS-EEEEECC
T ss_pred CCCEEEEEEeChhhhccCCcCCHHHHHHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHc--CCC-EEEEecc
Confidence 3477777765321 2222 2246678889999999999998887666677888877 443 3666443
No 377
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=20.94 E-value=59 Score=25.90 Aligned_cols=40 Identities=8% Similarity=0.087 Sum_probs=30.6
Q ss_pred HHHHHcHHHHHhCCCEEEEEeCCCH---------------HHHHHHHHHhCCCce
Q 025474 117 DYLAAKKDVMDASGVALVLIGPGSV---------------EQARTFSEQTKFKGE 156 (252)
Q Consensus 117 ~~L~~~~~~l~~~Gv~vV~Vs~~~~---------------~~~~~f~e~~~~~fp 156 (252)
+...+...+++++|++++.++-.+. +.++...++.++.|.
T Consensus 59 ~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 113 (218)
T 2o2x_A 59 PQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD 113 (218)
T ss_dssp GGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred cCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee
Confidence 3444556667788999999998876 677888888887754
No 378
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=20.91 E-value=3.3e+02 Score=23.92 Aligned_cols=59 Identities=12% Similarity=0.138 Sum_probs=40.9
Q ss_pred HHHHHHHcHHHHHhCCCEEEEEeC-CCHHHHHHHHHHhCCCceeee---------cCChHHHHHcCCcccc
Q 025474 115 RADYLAAKKDVMDASGVALVLIGP-GSVEQARTFSEQTKFKGEVYA---------DPNHSSYEALSFVSGV 175 (252)
Q Consensus 115 el~~L~~~~~~l~~~Gv~vV~Vs~-~~~~~~~~f~e~~~~~fpll~---------Dp~~~ly~alGv~~~~ 175 (252)
-+.+.-+....+++.|+..|.+-. .+.+.+++|.+...+ |++. ..+.+-.+++|+..-.
T Consensus 187 gl~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l~~--P~lan~~~~g~~~~~~~~eL~~lGv~~v~ 255 (318)
T 1zlp_A 187 GLEEGIRRANLYKEAGADATFVEAPANVDELKEVSAKTKG--LRIANMIEGGKTPLHTPEEFKEMGFHLIA 255 (318)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHSCS--EEEEEECTTSSSCCCCHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhcCC--CEEEEeccCCCCCCCCHHHHHHcCCeEEE
Confidence 345666667778999999888854 456899999999764 4432 2245567788887643
No 379
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=20.83 E-value=1.2e+02 Score=23.86 Aligned_cols=36 Identities=14% Similarity=0.273 Sum_probs=27.9
Q ss_pred HHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
..+...++++.|+.+..++..+...++...+.+++.
T Consensus 110 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 110 AAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 344456677889999999988888888888887765
No 380
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=20.81 E-value=1e+02 Score=23.95 Aligned_cols=33 Identities=6% Similarity=-0.011 Sum_probs=28.1
Q ss_pred cHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 122 ~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
...++++.|++++.|+-.+...++.+.+++++.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~ 93 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGIT 93 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc
Confidence 456677899999999999888899999988876
No 381
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=20.81 E-value=57 Score=25.17 Aligned_cols=36 Identities=6% Similarity=0.063 Sum_probs=29.9
Q ss_pred HHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
..+....+++.|+++..++.+....++.+.+..++.
T Consensus 80 ~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 115 (217)
T 3m1y_A 80 ALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLD 115 (217)
T ss_dssp HHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcc
Confidence 445566778899999999998888888888888876
No 382
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=20.66 E-value=80 Score=24.02 Aligned_cols=36 Identities=11% Similarity=0.245 Sum_probs=29.4
Q ss_pred HHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
..+..+.+++.|+.++.++.+....++.+.+..++.
T Consensus 87 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 122 (219)
T 3kd3_A 87 IKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIP 122 (219)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCC
Confidence 344566778899999999998888888888888886
No 383
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=20.56 E-value=3.9e+02 Score=23.31 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=41.7
Q ss_pred HHHHHHcHHHHHhCCCEEEEEe-CCCHHHHHHHHHHhCCCce--eee-----cCChHHHHHcCCcccc
Q 025474 116 ADYLAAKKDVMDASGVALVLIG-PGSVEQARTFSEQTKFKGE--VYA-----DPNHSSYEALSFVSGV 175 (252)
Q Consensus 116 l~~L~~~~~~l~~~Gv~vV~Vs-~~~~~~~~~f~e~~~~~fp--ll~-----Dp~~~ly~alGv~~~~ 175 (252)
+.+.-+....+.+.|+..|.+- ..+.+.+++|.+....|.. ++. ..+.+-.+++|+..-.
T Consensus 174 ~~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~ 241 (305)
T 3ih1_A 174 LDEAIERANAYVKAGADAIFPEALQSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANMGFQMVI 241 (305)
T ss_dssp HHHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHHcCCCEEE
Confidence 5666666777889999998884 4556899999999776542 111 1234567788987644
No 384
>1v2a_A Glutathione transferase GST1-6; glutathione S-transferase, detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles dirus} SCOP: a.45.1.1 c.47.1.5
Probab=20.47 E-value=1.3e+02 Score=23.39 Aligned_cols=56 Identities=7% Similarity=-0.018 Sum_probs=33.7
Q ss_pred EEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC-ceeeecCCh
Q 025474 103 FARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GEVYADPNH 163 (252)
Q Consensus 103 F~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~-fpll~Dp~~ 163 (252)
.|-..+||+|++-.-.|.+ .....+++-|...+.+...+|.+.+... .|++.|.+.
T Consensus 3 Ly~~~~s~~~~~v~~~L~~-----~gi~~e~~~v~~~~~~~~~~~~~~nP~g~vP~L~~~g~ 59 (210)
T 1v2a_A 3 YYYSLISPPCQSAILLAKK-----LGITLNLKKTNVHDPVERDALTKLNPQHTIPTLVDNGH 59 (210)
T ss_dssp EEECTTCHHHHHHHHHHHH-----HTCCCEEEECCTTCHHHHHHHHHHCTTCCSCEEEETTE
T ss_pred EEeCCCCccHHHHHHHHHH-----cCCCcEEEECCcccchhhHHHHHhCCCCCcCeEEECCE
Confidence 3456789999874444432 2333566666665544336777776543 688877653
No 385
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=20.42 E-value=1.1e+02 Score=24.36 Aligned_cols=33 Identities=9% Similarity=0.190 Sum_probs=24.9
Q ss_pred cHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 122 ~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
...++++.|+++..++.++...++...+.+++.
T Consensus 122 ~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 122 TLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 345566788888888888877778888887764
No 386
>3dex_A SAV_2001; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Streptomyces avermitilis} SCOP: c.47.1.0
Probab=20.41 E-value=41 Score=25.23 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=27.4
Q ss_pred cceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025474 215 QGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 251 (252)
Q Consensus 215 ~GG~fVid~ggg~I~~~h~~~~~~D~p~~~eIL~al~ 251 (252)
.||.|-|.-+ |+++|.-. -+.-|+.++|.+.++
T Consensus 53 ~gG~FeV~vd-g~lVwsRk---~gGFPd~keLkq~VR 85 (107)
T 3dex_A 53 TGGVFVVRVD-DEVVWDRR---EQGFPEPTAVKRLVR 85 (107)
T ss_dssp SSSCEEEEET-TEEEEEHH---HHCSCCHHHHHHHHH
T ss_pred CCceEEEEEC-CEEEEEec---CCCCCCHHHHHHHHH
Confidence 5788988777 69999887 578999999988775
No 387
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=20.35 E-value=1.6e+02 Score=25.49 Aligned_cols=59 Identities=12% Similarity=0.133 Sum_probs=38.7
Q ss_pred HHHHHHHcHHHHHhCCCE-EEEEeCC------CH-HHHHHHHHHhCCCceeeecCChHHHHHcCCcc
Q 025474 115 RADYLAAKKDVMDASGVA-LVLIGPG------SV-EQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (252)
Q Consensus 115 el~~L~~~~~~l~~~Gv~-vV~Vs~~------~~-~~~~~f~e~~~~~fpll~Dp~~~ly~alGv~~ 173 (252)
-+..|.+..+.+++.|++ +.+|... +. +-+++-.+++|++..+++..+-.-|..+|+..
T Consensus 58 ~~~~L~~f~~~~~~~~v~~v~~vATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~ 124 (315)
T 3mdq_A 58 ALDTLKKFRVILDEHAVVHVIATGTSAVRSGSNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQ 124 (315)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECHHHHHCTTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeeHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHh
Confidence 334455556666777875 7777764 33 34455666789999999887777666666543
No 388
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=20.34 E-value=5.5 Score=22.81 Aligned_cols=21 Identities=14% Similarity=0.196 Sum_probs=15.9
Q ss_pred CCHhHHHHHHHHHHcHHHHHh
Q 025474 108 GCVLCRKRADYLAAKKDVMDA 128 (252)
Q Consensus 108 ~Cp~C~~el~~L~~~~~~l~~ 128 (252)
-||.|..+++++..+..-|++
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHHH
Confidence 599999999888776655543
No 389
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=20.27 E-value=1e+02 Score=22.95 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=28.1
Q ss_pred cHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 122 ~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
...+++++|++++.++-.+...++...+++++.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~ 71 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVD 71 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCS
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC
Confidence 356678899999999999888899999988876
No 390
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=20.25 E-value=90 Score=24.37 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=27.4
Q ss_pred HcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 121 ~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
+..+.+++.|+.++.++.++...++...+.+++.
T Consensus 111 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 144 (237)
T 4ex6_A 111 EGLDRLSAAGFRLAMATSKVEKAARAIAELTGLD 144 (237)
T ss_dssp HHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGG
T ss_pred HHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCch
Confidence 4456677889999999999888888888887764
No 391
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=20.19 E-value=1.2e+02 Score=23.76 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=28.8
Q ss_pred cHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC
Q 025474 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (252)
Q Consensus 122 ~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~ 154 (252)
...+++++|+++..++.++.+.++...++.++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~ 86 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE 86 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH
Confidence 566788899999999999988999999998875
No 392
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=20.14 E-value=32 Score=32.60 Aligned_cols=37 Identities=8% Similarity=0.209 Sum_probs=28.4
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEE
Q 025474 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFA 104 (252)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vvlvF~ 104 (252)
.+..|..+||+.|.+.+|....|.+++..++.+|+.|
T Consensus 444 ~~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~~~ll~~ 480 (570)
T 3fmw_A 444 HPWPGRFAGGLVLSRPSGEPVPVAELLRSARPLLLDL 480 (570)
T ss_dssp CSSTTCBCTTCEECCSTTCCEEHHHHSTTCCCEEECS
T ss_pred CccccCcCCCceeecCCCcceeHHHHhcCCeEEEEEe
Confidence 4568999999999987888788989887654444443
No 393
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A*
Probab=20.09 E-value=1.8e+02 Score=21.17 Aligned_cols=61 Identities=11% Similarity=0.166 Sum_probs=37.5
Q ss_pred cEEEEEEcCCCCHhHHHHHHHHHHcHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCC--ceeeecC
Q 025474 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GEVYADP 161 (252)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~vV~Vs~~~~~~~~~f~e~~~~~--fpll~Dp 161 (252)
+.|++.+.+-- ..-..-+..|.+...++++.|.+++.++.. +.+++..+..++. |+++.+.
T Consensus 53 ~~vvlDls~V~-~iDSsGl~~L~~~~~~~~~~g~~l~l~~~~--~~v~~~l~~~gl~~~~~i~~s~ 115 (125)
T 2ka5_A 53 NKIFLVLSDVE-SIDSFSLGVIVNILKSISSSGGFFALVSPN--EKVERVLSLTNLDRIVKIYDTI 115 (125)
T ss_dssp CEEEEECTTCS-CCCHHHHHHHHHHHHHHHHHTCEEEEECCC--HHHHHHHHHTTSTTTSEEESSH
T ss_pred CEEEEECCCCC-EEcHHHHHHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHcCCCceEEecCCH
Confidence 45666654421 112234566677777788888888888775 3566666677765 5665543
Done!