Query 025475
Match_columns 252
No_of_seqs 189 out of 3067
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 11:04:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025475.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025475hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pxx_A Uncharacterized protein 99.9 1.9E-23 6.6E-28 166.0 18.4 169 11-180 2-180 (215)
2 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.4E-24 4.7E-29 178.3 2.9 184 40-236 61-259 (261)
3 2gb4_A Thiopurine S-methyltran 99.9 2.2E-22 7.7E-27 164.3 14.1 141 12-159 29-191 (252)
4 1pjz_A Thiopurine S-methyltran 99.8 5.3E-20 1.8E-24 145.6 11.9 114 39-159 11-140 (203)
5 3lcc_A Putative methyl chlorid 99.8 6.6E-20 2.2E-24 148.0 12.6 139 16-162 33-174 (235)
6 4hg2_A Methyltransferase type 99.8 4.4E-20 1.5E-24 151.0 10.0 113 37-163 27-139 (257)
7 3l8d_A Methyltransferase; stru 99.8 3.1E-19 1.1E-23 144.4 12.5 117 37-163 41-157 (242)
8 3g5l_A Putative S-adenosylmeth 99.8 5E-19 1.7E-23 144.3 12.6 111 42-161 35-147 (253)
9 2p7i_A Hypothetical protein; p 99.8 3.6E-19 1.2E-23 144.3 11.5 136 15-163 9-145 (250)
10 2a14_A Indolethylamine N-methy 99.8 1.1E-19 3.8E-24 149.3 8.1 145 12-161 14-199 (263)
11 3ofk_A Nodulation protein S; N 99.8 2E-18 6.8E-23 137.4 14.7 143 12-162 10-157 (216)
12 3sm3_A SAM-dependent methyltra 99.8 5.9E-19 2E-23 141.9 11.6 135 16-162 3-144 (235)
13 3cgg_A SAM-dependent methyltra 99.8 6.2E-18 2.1E-22 131.8 16.8 112 41-162 38-150 (195)
14 3dh0_A SAM dependent methyltra 99.8 2E-19 6.8E-24 143.5 8.0 109 47-163 35-147 (219)
15 3pfg_A N-methyltransferase; N, 99.8 2.7E-18 9.2E-23 140.8 14.1 137 16-164 19-156 (263)
16 2kw5_A SLR1183 protein; struct 99.8 7.7E-19 2.6E-23 138.4 10.0 135 18-164 1-136 (202)
17 2xvm_A Tellurite resistance pr 99.8 2.2E-18 7.5E-23 135.1 12.5 133 12-161 4-138 (199)
18 1xtp_A LMAJ004091AAA; SGPP, st 99.8 1.2E-18 4.2E-23 141.9 10.9 107 48-160 92-198 (254)
19 2ex4_A Adrenal gland protein A 99.8 1.1E-18 3.8E-23 141.3 10.1 108 49-162 79-188 (241)
20 3ou2_A SAM-dependent methyltra 99.8 3.4E-18 1.2E-22 136.0 12.0 108 47-164 44-151 (218)
21 3hnr_A Probable methyltransfer 99.8 6.7E-18 2.3E-22 134.7 13.7 104 49-162 45-148 (220)
22 3h2b_A SAM-dependent methyltra 99.8 7.8E-18 2.7E-22 132.7 13.6 104 50-163 42-145 (203)
23 3e23_A Uncharacterized protein 99.8 7.5E-18 2.6E-22 133.6 13.5 111 40-162 34-144 (211)
24 3ujc_A Phosphoethanolamine N-m 99.8 4.6E-18 1.6E-22 139.2 12.5 109 47-161 53-161 (266)
25 2i62_A Nicotinamide N-methyltr 99.8 1.6E-18 5.3E-23 142.1 9.5 146 13-161 16-200 (265)
26 3dtn_A Putative methyltransfer 99.8 7.7E-18 2.6E-22 135.6 13.1 109 48-163 43-152 (234)
27 4htf_A S-adenosylmethionine-de 99.8 5.5E-18 1.9E-22 140.6 12.3 116 40-163 59-177 (285)
28 3ggd_A SAM-dependent methyltra 99.8 6.3E-18 2.1E-22 137.1 12.3 112 45-164 52-168 (245)
29 2o57_A Putative sarcosine dime 99.8 6.8E-18 2.3E-22 140.8 12.7 106 47-161 80-189 (297)
30 1vl5_A Unknown conserved prote 99.8 3.7E-18 1.3E-22 139.7 10.8 105 48-161 36-142 (260)
31 3kkz_A Uncharacterized protein 99.8 1.1E-17 3.8E-22 137.5 13.4 105 47-160 44-151 (267)
32 3dlc_A Putative S-adenosyl-L-m 99.8 1.4E-17 4.8E-22 132.2 13.5 106 51-164 45-153 (219)
33 3bkw_A MLL3908 protein, S-aden 99.7 2.2E-17 7.5E-22 133.5 13.5 104 49-161 43-146 (243)
34 1ve3_A Hypothetical protein PH 99.7 3.1E-17 1E-21 131.3 14.0 121 36-163 25-146 (227)
35 2gs9_A Hypothetical protein TT 99.7 1.7E-17 5.9E-22 131.5 12.3 110 40-163 27-136 (211)
36 3jwh_A HEN1; methyltransferase 99.7 2.9E-17 9.8E-22 130.9 13.6 106 49-160 29-142 (217)
37 1xxl_A YCGJ protein; structura 99.7 2.3E-17 7.8E-22 133.5 13.0 108 47-163 19-128 (239)
38 3f4k_A Putative methyltransfer 99.7 2.7E-17 9.1E-22 134.2 13.4 105 47-160 44-151 (257)
39 3g2m_A PCZA361.24; SAM-depende 99.7 1.7E-17 5.7E-22 138.7 12.2 117 41-165 74-196 (299)
40 3mgg_A Methyltransferase; NYSG 99.7 1.5E-17 5E-22 137.3 11.4 116 37-160 23-143 (276)
41 1y8c_A S-adenosylmethionine-de 99.7 2.7E-17 9.2E-22 133.0 12.5 116 39-161 27-144 (246)
42 3ccf_A Cyclopropane-fatty-acyl 99.7 3.7E-17 1.3E-21 135.2 13.6 102 48-162 56-157 (279)
43 2yqz_A Hypothetical protein TT 99.7 3E-17 1E-21 134.2 12.6 104 46-158 36-140 (263)
44 1nkv_A Hypothetical protein YJ 99.7 1.6E-17 5.4E-22 135.5 10.9 105 47-160 34-141 (256)
45 2p8j_A S-adenosylmethionine-de 99.7 2E-17 6.8E-22 130.8 11.1 111 47-164 21-133 (209)
46 3jwg_A HEN1, methyltransferase 99.7 3.4E-17 1.2E-21 130.6 12.5 106 48-159 28-141 (219)
47 3bus_A REBM, methyltransferase 99.7 2.6E-17 9E-22 135.5 12.2 106 48-161 60-168 (273)
48 3m70_A Tellurite resistance pr 99.7 8.4E-17 2.9E-21 133.5 15.2 104 49-160 120-224 (286)
49 2avn_A Ubiquinone/menaquinone 99.7 4.4E-17 1.5E-21 133.5 13.2 114 37-162 42-155 (260)
50 3dli_A Methyltransferase; PSI- 99.7 2.1E-17 7.2E-22 133.7 11.0 104 47-163 39-144 (240)
51 3bxo_A N,N-dimethyltransferase 99.7 4.7E-17 1.6E-21 131.2 12.9 137 16-164 9-146 (239)
52 3g5t_A Trans-aconitate 3-methy 99.7 2.5E-17 8.6E-22 137.6 11.6 115 38-161 24-151 (299)
53 1ri5_A MRNA capping enzyme; me 99.7 5.6E-17 1.9E-21 135.0 13.4 115 44-162 59-177 (298)
54 3ege_A Putative methyltransfer 99.7 1.5E-17 5.2E-22 136.3 9.6 111 38-162 21-133 (261)
55 3iv6_A Putative Zn-dependent a 99.7 1.2E-16 4E-21 130.5 13.6 103 47-160 43-149 (261)
56 3mti_A RRNA methylase; SAM-dep 99.7 6E-17 2.1E-21 125.7 11.2 121 40-161 13-137 (185)
57 2p35_A Trans-aconitate 2-methy 99.7 2.3E-16 7.7E-21 128.8 14.7 103 48-162 32-135 (259)
58 3thr_A Glycine N-methyltransfe 99.7 4.1E-17 1.4E-21 135.8 10.3 112 49-161 57-177 (293)
59 3gu3_A Methyltransferase; alph 99.7 1E-16 3.5E-21 133.0 12.6 106 47-161 20-128 (284)
60 3vc1_A Geranyl diphosphate 2-C 99.7 8.8E-17 3E-21 135.2 12.1 104 48-161 116-223 (312)
61 3i9f_A Putative type 11 methyl 99.7 4.3E-17 1.5E-21 124.8 9.3 101 47-162 15-115 (170)
62 2g72_A Phenylethanolamine N-me 99.7 6.6E-17 2.3E-21 134.4 10.5 109 48-159 70-215 (289)
63 3ocj_A Putative exported prote 99.7 9.1E-17 3.1E-21 134.6 11.4 117 41-163 110-231 (305)
64 2vdw_A Vaccinia virus capping 99.7 3.9E-17 1.3E-21 136.7 9.1 110 49-162 48-172 (302)
65 3d2l_A SAM-dependent methyltra 99.7 2.8E-16 9.7E-21 126.9 13.3 116 38-161 22-139 (243)
66 1zx0_A Guanidinoacetate N-meth 99.7 6.2E-17 2.1E-21 130.7 9.1 109 47-161 58-172 (236)
67 1wzn_A SAM-dependent methyltra 99.7 3.3E-16 1.1E-20 127.4 13.4 135 16-160 9-146 (252)
68 3hem_A Cyclopropane-fatty-acyl 99.7 2.6E-16 8.9E-21 131.6 12.8 111 47-164 70-188 (302)
69 4fsd_A Arsenic methyltransfera 99.7 1.2E-16 4.1E-21 138.1 10.6 106 48-161 82-205 (383)
70 3g07_A 7SK snRNA methylphospha 99.7 1.4E-16 4.7E-21 132.8 10.6 111 48-159 45-220 (292)
71 1kpg_A CFA synthase;, cyclopro 99.7 3.7E-16 1.3E-20 129.6 12.6 107 47-163 62-172 (287)
72 3p9n_A Possible methyltransfer 99.7 2.5E-16 8.5E-21 122.8 10.9 108 48-161 43-155 (189)
73 3e8s_A Putative SAM dependent 99.7 2.1E-16 7.2E-21 126.1 10.6 103 49-164 52-157 (227)
74 3orh_A Guanidinoacetate N-meth 99.7 1.3E-16 4.6E-21 128.9 9.0 106 47-159 58-170 (236)
75 1vlm_A SAM-dependent methyltra 99.7 4E-16 1.4E-20 124.5 11.5 104 40-162 39-142 (219)
76 2fk8_A Methoxy mycolic acid sy 99.7 6.6E-16 2.3E-20 130.0 13.2 108 47-164 88-199 (318)
77 3evz_A Methyltransferase; NYSG 99.7 8.9E-16 3E-20 123.2 12.7 121 43-163 49-183 (230)
78 3bgv_A MRNA CAP guanine-N7 met 99.7 1.1E-15 3.7E-20 128.5 13.4 120 41-163 26-159 (313)
79 3eey_A Putative rRNA methylase 99.7 5.4E-16 1.9E-20 121.5 10.5 121 41-161 14-141 (197)
80 3grz_A L11 mtase, ribosomal pr 99.7 8.4E-16 2.9E-20 121.2 11.3 111 39-162 50-162 (205)
81 3lpm_A Putative methyltransfer 99.6 4.3E-15 1.5E-19 121.6 15.6 113 49-161 49-178 (259)
82 1af7_A Chemotaxis receptor met 99.6 1.3E-15 4.6E-20 125.2 12.4 104 49-158 105-251 (274)
83 3dmg_A Probable ribosomal RNA 99.6 1.6E-15 5.6E-20 130.5 12.9 110 49-162 233-343 (381)
84 1vbf_A 231AA long hypothetical 99.6 2.2E-15 7.5E-20 121.0 12.2 101 47-162 68-168 (231)
85 2qe6_A Uncharacterized protein 99.6 2.3E-15 7.7E-20 124.3 12.1 109 49-162 77-199 (274)
86 1nt2_A Fibrillarin-like PRE-rR 99.6 4E-15 1.4E-19 118.1 12.8 103 47-159 55-161 (210)
87 2aot_A HMT, histamine N-methyl 99.6 5.2E-16 1.8E-20 129.2 7.9 107 49-162 52-175 (292)
88 1dus_A MJ0882; hypothetical pr 99.6 6E-15 2E-19 114.7 13.4 116 39-164 40-162 (194)
89 3fzg_A 16S rRNA methylase; met 99.6 6E-16 2.1E-20 119.0 7.5 115 36-159 36-152 (200)
90 3e05_A Precorrin-6Y C5,15-meth 99.6 7.2E-15 2.5E-19 115.8 13.8 104 47-161 38-144 (204)
91 4df3_A Fibrillarin-like rRNA/T 99.6 8.6E-15 3E-19 117.2 14.3 123 30-161 53-184 (233)
92 3cc8_A Putative methyltransfer 99.6 3.3E-15 1.1E-19 119.4 11.9 103 48-163 31-134 (230)
93 2ift_A Putative methylase HI07 99.6 1E-15 3.5E-20 120.6 8.6 106 49-162 53-166 (201)
94 3dp7_A SAM-dependent methyltra 99.6 6.1E-15 2.1E-19 126.5 13.5 109 48-163 178-291 (363)
95 3htx_A HEN1; HEN1, small RNA m 99.6 5.5E-15 1.9E-19 135.4 13.1 107 49-162 721-837 (950)
96 2fyt_A Protein arginine N-meth 99.6 5.5E-15 1.9E-19 125.6 11.8 104 47-156 62-168 (340)
97 3m33_A Uncharacterized protein 99.6 3E-15 1E-19 120.0 9.6 100 40-157 39-140 (226)
98 3gdh_A Trimethylguanosine synt 99.6 5.6E-17 1.9E-21 131.2 -0.6 99 49-157 78-179 (241)
99 1yzh_A TRNA (guanine-N(7)-)-me 99.6 1.6E-14 5.5E-19 114.7 13.2 114 48-161 40-158 (214)
100 2frn_A Hypothetical protein PH 99.6 3.8E-15 1.3E-19 123.2 9.7 117 32-161 108-227 (278)
101 2zfu_A Nucleomethylin, cerebra 99.6 8.4E-16 2.9E-20 122.1 5.6 88 48-161 66-153 (215)
102 3fpf_A Mtnas, putative unchara 99.6 2.2E-14 7.6E-19 118.4 14.2 102 46-160 119-223 (298)
103 3bkx_A SAM-dependent methyltra 99.6 3.8E-15 1.3E-19 122.6 9.6 109 47-163 41-163 (275)
104 3uwp_A Histone-lysine N-methyl 99.6 2.8E-15 9.6E-20 128.3 9.0 116 40-164 163-293 (438)
105 2esr_A Methyltransferase; stru 99.6 2.9E-15 1E-19 115.3 8.3 107 48-162 30-141 (177)
106 3lbf_A Protein-L-isoaspartate 99.6 1.2E-14 4E-19 115.0 12.0 100 47-161 75-176 (210)
107 2ozv_A Hypothetical protein AT 99.6 6.9E-14 2.3E-18 114.5 16.8 112 48-160 35-171 (260)
108 3q87_B N6 adenine specific DNA 99.6 1.2E-14 4.2E-19 111.4 11.6 102 48-161 22-125 (170)
109 1fbn_A MJ fibrillarin homologu 99.6 8.9E-15 3E-19 117.6 11.2 101 47-158 72-177 (230)
110 2fpo_A Methylase YHHF; structu 99.6 4.1E-15 1.4E-19 117.3 8.8 104 49-160 54-161 (202)
111 4e2x_A TCAB9; kijanose, tetron 99.6 6.4E-16 2.2E-20 134.9 4.6 105 48-161 106-210 (416)
112 3q7e_A Protein arginine N-meth 99.6 6.4E-15 2.2E-19 125.7 10.5 104 48-157 65-171 (349)
113 3ckk_A TRNA (guanine-N(7)-)-me 99.6 6.8E-15 2.3E-19 118.7 10.0 113 47-161 44-170 (235)
114 3dxy_A TRNA (guanine-N(7)-)-me 99.6 4.1E-15 1.4E-19 118.7 8.6 109 49-162 34-153 (218)
115 3i53_A O-methyltransferase; CO 99.6 1.5E-14 5.2E-19 122.5 12.2 107 49-164 169-279 (332)
116 2fhp_A Methylase, putative; al 99.6 2.2E-15 7.7E-20 116.8 6.4 107 48-162 43-157 (187)
117 2b3t_A Protein methyltransfera 99.6 7.5E-15 2.6E-19 121.3 9.5 120 39-160 98-239 (276)
118 1yb2_A Hypothetical protein TA 99.6 5.5E-14 1.9E-18 116.0 14.4 102 47-162 108-214 (275)
119 2nxc_A L11 mtase, ribosomal pr 99.6 1E-14 3.5E-19 119.0 9.5 109 40-161 111-220 (254)
120 2r3s_A Uncharacterized protein 99.6 1.7E-14 6E-19 122.1 10.9 108 48-163 164-275 (335)
121 3r0q_C Probable protein argini 99.6 1.4E-14 4.7E-19 124.8 10.2 106 47-159 61-169 (376)
122 2fca_A TRNA (guanine-N(7)-)-me 99.6 1.2E-14 4E-19 115.6 9.1 114 48-161 37-155 (213)
123 4azs_A Methyltransferase WBDD; 99.6 6.4E-15 2.2E-19 133.4 8.5 115 43-165 60-179 (569)
124 4dcm_A Ribosomal RNA large sub 99.6 2.9E-14 1E-18 122.6 12.1 120 40-163 211-338 (375)
125 3mcz_A O-methyltransferase; ad 99.6 1.6E-14 5.6E-19 123.2 10.5 109 50-164 180-292 (352)
126 3gwz_A MMCR; methyltransferase 99.6 4E-14 1.4E-18 121.6 12.9 108 48-164 201-312 (369)
127 1xdz_A Methyltransferase GIDB; 99.6 9.6E-15 3.3E-19 118.1 8.6 102 48-161 69-176 (240)
128 3njr_A Precorrin-6Y methylase; 99.5 6.4E-14 2.2E-18 110.6 13.0 102 47-162 53-157 (204)
129 1qzz_A RDMB, aclacinomycin-10- 99.5 3.6E-14 1.2E-18 122.0 12.4 105 47-160 180-288 (374)
130 3adn_A Spermidine synthase; am 99.5 1.1E-14 3.9E-19 121.1 8.6 108 47-159 81-198 (294)
131 2yxe_A Protein-L-isoaspartate 99.5 3E-14 1E-18 113.1 10.7 135 14-162 38-180 (215)
132 1ws6_A Methyltransferase; stru 99.5 1.1E-14 3.8E-19 111.1 7.8 108 47-162 39-150 (171)
133 1l3i_A Precorrin-6Y methyltran 99.5 3.9E-14 1.3E-18 109.9 10.8 103 47-162 31-137 (192)
134 2ipx_A RRNA 2'-O-methyltransfe 99.5 3.2E-14 1.1E-18 114.4 10.6 104 47-159 75-182 (233)
135 1x19_A CRTF-related protein; m 99.5 4.6E-14 1.6E-18 120.8 12.2 109 47-164 188-300 (359)
136 2pjd_A Ribosomal RNA small sub 99.5 2.9E-14 9.9E-19 121.4 10.6 118 40-162 185-306 (343)
137 1g6q_1 HnRNP arginine N-methyl 99.5 3.1E-14 1E-18 120.5 10.6 103 48-156 37-142 (328)
138 3hm2_A Precorrin-6Y C5,15-meth 99.5 4.3E-14 1.5E-18 108.6 10.3 106 47-164 23-132 (178)
139 2y1w_A Histone-arginine methyl 99.5 2.4E-14 8.2E-19 122.1 9.6 103 48-158 49-154 (348)
140 3bzb_A Uncharacterized protein 99.5 1.2E-13 4E-18 114.4 13.2 114 39-159 67-205 (281)
141 4dzr_A Protein-(glutamine-N5) 99.5 2.1E-15 7.3E-20 119.2 2.6 111 48-160 29-165 (215)
142 1i1n_A Protein-L-isoaspartate 99.5 3.8E-14 1.3E-18 113.4 9.9 102 46-161 74-184 (226)
143 1jsx_A Glucose-inhibited divis 99.5 1.6E-13 5.5E-18 108.1 13.2 109 49-170 65-176 (207)
144 3id6_C Fibrillarin-like rRNA/T 99.5 1.9E-13 6.4E-18 109.6 13.3 120 31-159 53-181 (232)
145 1tw3_A COMT, carminomycin 4-O- 99.5 8.5E-14 2.9E-18 119.1 12.1 107 48-163 182-293 (360)
146 3g89_A Ribosomal RNA small sub 99.5 3.9E-14 1.3E-18 115.2 9.5 108 48-166 79-191 (249)
147 3lec_A NADB-rossmann superfami 99.5 2E-13 6.9E-18 108.9 13.2 124 37-170 9-136 (230)
148 1p91_A Ribosomal RNA large sub 99.5 1.5E-13 5.3E-18 112.7 12.8 107 39-163 74-182 (269)
149 1g8a_A Fibrillarin-like PRE-rR 99.5 2.5E-13 8.4E-18 108.7 13.7 103 47-158 71-177 (227)
150 2vdv_E TRNA (guanine-N(7)-)-me 99.5 7.6E-14 2.6E-18 113.3 10.8 107 47-160 47-174 (246)
151 1o9g_A RRNA methyltransferase; 99.5 6.3E-14 2.2E-18 114.0 10.3 112 49-160 51-215 (250)
152 3ntv_A MW1564 protein; rossman 99.5 4.2E-14 1.5E-18 113.8 9.1 102 48-159 70-176 (232)
153 4dmg_A Putative uncharacterize 99.5 7.8E-14 2.7E-18 120.4 11.2 125 36-163 201-330 (393)
154 2ip2_A Probable phenazine-spec 99.5 6.9E-14 2.4E-18 118.5 10.7 106 48-163 167-276 (334)
155 3reo_A (ISO)eugenol O-methyltr 99.5 6E-14 2.1E-18 120.5 10.4 102 48-163 202-304 (368)
156 3u81_A Catechol O-methyltransf 99.5 4.3E-14 1.5E-18 112.8 8.6 106 49-162 58-173 (221)
157 3p2e_A 16S rRNA methylase; met 99.5 3.3E-14 1.1E-18 113.9 7.9 115 43-159 18-139 (225)
158 1jg1_A PIMT;, protein-L-isoasp 99.5 1.1E-13 3.6E-18 111.6 10.9 101 47-162 89-192 (235)
159 3gnl_A Uncharacterized protein 99.5 3.5E-13 1.2E-17 108.4 13.3 124 37-170 9-136 (244)
160 3p9c_A Caffeic acid O-methyltr 99.5 7.9E-14 2.7E-18 119.6 10.1 102 48-163 200-302 (364)
161 3mq2_A 16S rRNA methyltransfer 99.5 3E-14 1E-18 113.4 6.9 104 47-159 25-140 (218)
162 2igt_A SAM dependent methyltra 99.5 4.1E-14 1.4E-18 119.7 8.1 113 48-161 152-274 (332)
163 3kr9_A SAM-dependent methyltra 99.5 4.5E-13 1.5E-17 106.7 13.6 122 39-170 5-130 (225)
164 1ne2_A Hypothetical protein TA 99.5 2E-13 6.9E-18 107.1 11.4 97 48-158 50-146 (200)
165 3bwc_A Spermidine synthase; SA 99.5 1.4E-13 4.8E-18 115.2 10.8 109 48-161 94-212 (304)
166 1dl5_A Protein-L-isoaspartate 99.5 1.5E-13 5E-18 115.8 10.8 100 47-160 73-176 (317)
167 2pbf_A Protein-L-isoaspartate 99.5 7.4E-14 2.5E-18 111.8 8.5 108 41-161 72-195 (227)
168 3b3j_A Histone-arginine methyl 99.5 1.2E-13 4E-18 122.4 10.1 102 48-157 157-261 (480)
169 4hc4_A Protein arginine N-meth 99.5 1.2E-13 4E-18 118.2 9.5 101 49-156 83-186 (376)
170 3a27_A TYW2, uncharacterized p 99.5 1.6E-13 5.4E-18 113.1 10.0 107 43-162 113-222 (272)
171 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1.3E-13 4.3E-18 112.4 9.3 103 47-162 94-201 (258)
172 1fp1_D Isoliquiritigenin 2'-O- 99.5 7.1E-14 2.4E-18 120.2 8.2 100 48-161 208-308 (372)
173 2as0_A Hypothetical protein PH 99.5 1.4E-13 4.9E-18 119.3 9.9 130 33-162 201-338 (396)
174 3sso_A Methyltransferase; macr 99.5 8.4E-14 2.9E-18 118.9 8.2 107 39-161 206-326 (419)
175 2yxd_A Probable cobalt-precorr 99.5 4.1E-13 1.4E-17 103.3 11.4 101 47-163 33-135 (183)
176 3lst_A CALO1 methyltransferase 99.5 1.8E-13 6.1E-18 116.7 10.1 105 47-163 182-290 (348)
177 3k6r_A Putative transferase PH 99.5 1.5E-13 5.1E-18 113.0 9.3 111 37-160 113-226 (278)
178 1u2z_A Histone-lysine N-methyl 99.5 2E-13 6.9E-18 118.7 10.2 108 47-162 240-362 (433)
179 1r18_A Protein-L-isoaspartate( 99.5 9.6E-14 3.3E-18 111.2 7.6 101 46-160 81-195 (227)
180 3tfw_A Putative O-methyltransf 99.5 2.3E-13 7.8E-18 110.6 9.9 104 48-161 62-172 (248)
181 3tma_A Methyltransferase; thum 99.5 4.6E-13 1.6E-17 114.4 12.0 115 47-162 201-320 (354)
182 3giw_A Protein of unknown func 99.5 1.5E-13 5.3E-18 112.1 8.5 108 51-163 80-204 (277)
183 1fp2_A Isoflavone O-methyltran 99.5 1.7E-13 5.8E-18 117.0 8.9 102 47-162 186-291 (352)
184 3dr5_A Putative O-methyltransf 99.4 1.1E-13 3.7E-18 110.6 7.1 99 51-159 58-163 (221)
185 2i7c_A Spermidine synthase; tr 99.4 2.5E-13 8.5E-18 112.5 9.4 109 47-160 76-193 (283)
186 1uir_A Polyamine aminopropyltr 99.4 2.1E-13 7.3E-18 114.6 9.0 111 47-159 75-195 (314)
187 2b78_A Hypothetical protein SM 99.4 2.2E-13 7.5E-18 117.6 9.3 126 38-163 201-335 (385)
188 2pt6_A Spermidine synthase; tr 99.4 3E-13 1E-17 114.0 9.7 109 47-160 114-231 (321)
189 3hp7_A Hemolysin, putative; st 99.4 1.3E-13 4.4E-18 113.9 7.1 107 39-158 73-184 (291)
190 1ixk_A Methyltransferase; open 99.4 5.8E-13 2E-17 112.0 11.1 114 47-161 116-248 (315)
191 2o07_A Spermidine synthase; st 99.4 2.3E-13 7.9E-18 113.8 8.5 109 48-159 94-209 (304)
192 4a6d_A Hydroxyindole O-methylt 99.4 1.1E-12 3.8E-17 112.0 12.9 107 48-163 178-287 (353)
193 1wy7_A Hypothetical protein PH 99.4 1.2E-12 4E-17 103.2 12.1 100 48-159 48-148 (207)
194 1xj5_A Spermidine synthase 1; 99.4 4.3E-13 1.5E-17 113.4 10.2 109 47-158 118-234 (334)
195 1mjf_A Spermidine synthase; sp 99.4 2.9E-13 1E-17 112.0 9.0 107 47-159 73-193 (281)
196 1i9g_A Hypothetical protein RV 99.4 2.5E-13 8.5E-18 112.1 8.5 103 47-162 97-206 (280)
197 3mb5_A SAM-dependent methyltra 99.4 2.7E-13 9.1E-18 110.4 8.6 101 47-161 91-196 (255)
198 1iy9_A Spermidine synthase; ro 99.4 2.1E-13 7.3E-18 112.4 8.1 110 48-160 74-190 (275)
199 1inl_A Spermidine synthase; be 99.4 3.3E-13 1.1E-17 112.5 9.2 111 48-160 89-206 (296)
200 3gjy_A Spermidine synthase; AP 99.4 5.7E-13 1.9E-17 111.2 10.4 108 51-161 91-202 (317)
201 1ej0_A FTSJ; methyltransferase 99.4 1.2E-13 4.2E-18 105.5 5.8 107 47-164 20-141 (180)
202 3v97_A Ribosomal RNA large sub 99.4 5.2E-13 1.8E-17 123.3 10.9 124 37-161 528-659 (703)
203 1nv8_A HEMK protein; class I a 99.4 3E-13 1E-17 112.1 8.4 108 49-159 123-249 (284)
204 3duw_A OMT, O-methyltransferas 99.4 4E-13 1.4E-17 107.2 8.6 104 48-161 57-169 (223)
205 2b2c_A Spermidine synthase; be 99.4 3.2E-13 1.1E-17 113.3 8.3 108 47-159 106-222 (314)
206 3ajd_A Putative methyltransfer 99.4 6.7E-13 2.3E-17 109.4 10.1 115 47-161 81-213 (274)
207 2plw_A Ribosomal RNA methyltra 99.4 9.5E-13 3.2E-17 103.2 10.5 106 47-163 20-158 (201)
208 3tr6_A O-methyltransferase; ce 99.4 2.3E-13 7.9E-18 108.6 7.0 103 49-161 64-176 (225)
209 2gpy_A O-methyltransferase; st 99.4 3.9E-13 1.3E-17 108.1 7.9 103 48-160 53-161 (233)
210 3dou_A Ribosomal RNA large sub 99.4 2.8E-12 9.5E-17 100.1 12.5 114 39-164 13-144 (191)
211 3c0k_A UPF0064 protein YCCW; P 99.4 7.5E-13 2.6E-17 114.7 10.2 130 32-162 204-342 (396)
212 2qm3_A Predicted methyltransfe 99.4 1.2E-12 4.1E-17 112.6 11.1 103 49-160 172-279 (373)
213 3c3p_A Methyltransferase; NP_9 99.4 3.7E-13 1.3E-17 106.4 7.3 100 49-159 56-160 (210)
214 2b25_A Hypothetical protein; s 99.4 1.4E-12 4.6E-17 110.7 10.8 104 47-162 103-222 (336)
215 1wxx_A TT1595, hypothetical pr 99.4 5.5E-13 1.9E-17 115.1 8.2 126 32-162 194-328 (382)
216 2yvl_A TRMI protein, hypotheti 99.4 1.7E-12 6E-17 104.9 10.3 100 48-161 90-192 (248)
217 2bm8_A Cephalosporin hydroxyla 99.4 4.2E-13 1.4E-17 108.3 6.4 99 49-160 81-188 (236)
218 3lcv_B Sisomicin-gentamicin re 99.4 7.8E-13 2.7E-17 106.3 7.9 116 37-160 120-237 (281)
219 2h00_A Methyltransferase 10 do 99.4 4E-13 1.4E-17 109.3 6.0 111 49-159 65-192 (254)
220 3frh_A 16S rRNA methylase; met 99.4 2.4E-12 8.4E-17 102.5 10.0 102 48-159 104-206 (253)
221 1zg3_A Isoflavanone 4'-O-methy 99.4 1.4E-12 4.7E-17 111.6 9.3 101 48-162 192-296 (358)
222 3tm4_A TRNA (guanine N2-)-meth 99.4 5.2E-12 1.8E-16 108.6 12.7 112 47-161 215-331 (373)
223 1o54_A SAM-dependent O-methylt 99.4 1.5E-12 5.3E-17 107.3 8.8 101 47-161 110-215 (277)
224 2cmg_A Spermidine synthase; tr 99.4 1.4E-12 4.8E-17 106.7 8.4 95 48-159 71-171 (262)
225 3r3h_A O-methyltransferase, SA 99.4 1.4E-13 4.6E-18 111.6 2.3 102 49-160 60-171 (242)
226 2hnk_A SAM-dependent O-methylt 99.4 2.1E-12 7.1E-17 104.2 8.9 103 48-160 59-182 (239)
227 1sui_A Caffeoyl-COA O-methyltr 99.4 8.4E-13 2.9E-17 107.2 6.4 102 48-159 78-190 (247)
228 3opn_A Putative hemolysin; str 99.3 6.3E-13 2.2E-17 106.9 5.2 108 39-159 25-137 (232)
229 2nyu_A Putative ribosomal RNA 99.3 3E-12 1E-16 99.8 8.7 106 47-164 20-150 (196)
230 2yx1_A Hypothetical protein MJ 99.3 2.7E-12 9.4E-17 108.8 8.9 105 42-163 188-295 (336)
231 2ld4_A Anamorsin; methyltransf 99.3 7.9E-13 2.7E-17 101.6 4.6 89 47-159 10-101 (176)
232 1zq9_A Probable dimethyladenos 99.3 9.8E-12 3.3E-16 103.0 11.0 77 48-128 27-106 (285)
233 2yxl_A PH0851 protein, 450AA l 99.3 1.9E-11 6.6E-16 107.6 13.2 116 47-162 257-392 (450)
234 3c3y_A Pfomt, O-methyltransfer 99.3 2.7E-12 9.3E-17 103.5 7.2 103 48-160 69-182 (237)
235 2wa2_A Non-structural protein 99.3 7.3E-13 2.5E-17 109.1 3.8 106 47-161 80-195 (276)
236 2f8l_A Hypothetical protein LM 99.3 5.9E-12 2E-16 107.1 9.4 110 49-160 130-257 (344)
237 2oxt_A Nucleoside-2'-O-methylt 99.3 7.8E-13 2.7E-17 108.4 3.8 106 47-161 72-187 (265)
238 3m4x_A NOL1/NOP2/SUN family pr 99.3 4.5E-12 1.5E-16 111.1 8.7 115 47-161 103-236 (456)
239 3cbg_A O-methyltransferase; cy 99.3 7.9E-12 2.7E-16 100.4 9.0 103 49-161 72-184 (232)
240 2avd_A Catechol-O-methyltransf 99.3 3.4E-12 1.2E-16 102.1 6.7 103 48-160 68-180 (229)
241 2frx_A Hypothetical protein YE 99.3 1E-11 3.5E-16 109.8 9.7 113 49-161 117-248 (479)
242 3m6w_A RRNA methylase; rRNA me 99.3 6.7E-12 2.3E-16 110.2 8.4 114 47-161 99-231 (464)
243 2p41_A Type II methyltransfera 99.3 2.4E-12 8.3E-17 107.6 5.3 105 47-162 80-194 (305)
244 1sqg_A SUN protein, FMU protei 99.3 2.2E-11 7.5E-16 106.6 10.9 116 47-162 244-377 (429)
245 3gru_A Dimethyladenosine trans 99.2 9.9E-11 3.4E-15 97.1 11.6 80 47-128 48-127 (295)
246 2h1r_A Dimethyladenosine trans 99.2 1E-10 3.5E-15 97.5 11.6 78 47-128 40-119 (299)
247 2qfm_A Spermine synthase; sper 99.2 4.3E-11 1.5E-15 101.1 8.8 113 48-161 187-316 (364)
248 2ih2_A Modification methylase 99.2 3.7E-11 1.3E-15 104.7 8.5 118 35-161 23-166 (421)
249 2jjq_A Uncharacterized RNA met 99.2 1.5E-10 5.3E-15 100.9 11.1 107 47-170 288-396 (425)
250 2okc_A Type I restriction enzy 99.1 2E-10 7E-15 100.9 11.0 123 36-160 156-308 (445)
251 1yub_A Ermam, rRNA methyltrans 99.1 2.8E-12 9.4E-17 104.0 -1.7 103 48-159 28-145 (245)
252 1qam_A ERMC' methyltransferase 99.1 1.2E-09 4.2E-14 88.3 13.9 85 39-126 18-105 (244)
253 3tqs_A Ribosomal RNA small sub 99.1 2.6E-10 8.7E-15 92.8 9.7 77 47-126 27-107 (255)
254 2xyq_A Putative 2'-O-methyl tr 99.1 2.1E-10 7.1E-15 94.8 8.9 102 47-163 61-175 (290)
255 2b9e_A NOL1/NOP2/SUN domain fa 99.1 1.5E-09 5.1E-14 90.7 13.8 114 47-161 100-236 (309)
256 1uwv_A 23S rRNA (uracil-5-)-me 99.1 4.4E-10 1.5E-14 98.4 11.0 100 48-159 285-389 (433)
257 3ldg_A Putative uncharacterize 99.1 1.1E-09 3.7E-14 94.2 13.1 112 47-163 192-347 (384)
258 3k0b_A Predicted N6-adenine-sp 99.1 5.9E-10 2E-14 96.2 10.9 113 47-164 199-355 (393)
259 3fut_A Dimethyladenosine trans 99.1 4.2E-10 1.5E-14 92.2 9.4 92 32-127 29-122 (271)
260 3ldu_A Putative methylase; str 99.1 6.4E-10 2.2E-14 95.8 10.8 111 48-164 194-349 (385)
261 3bt7_A TRNA (uracil-5-)-methyl 99.0 3.7E-10 1.3E-14 96.9 7.8 108 41-162 204-329 (369)
262 2dul_A N(2),N(2)-dimethylguano 99.0 1.8E-10 6E-15 99.0 5.6 100 49-159 47-164 (378)
263 3axs_A Probable N(2),N(2)-dime 99.0 1.9E-10 6.5E-15 98.9 5.5 100 49-159 52-158 (392)
264 3o4f_A Spermidine synthase; am 99.0 4.4E-09 1.5E-13 86.6 12.9 110 47-159 81-198 (294)
265 2ar0_A M.ecoki, type I restric 98.9 2.3E-09 7.9E-14 96.2 7.4 125 36-160 154-313 (541)
266 3ftd_A Dimethyladenosine trans 98.9 5E-09 1.7E-13 84.9 8.3 75 48-126 30-106 (249)
267 2r6z_A UPF0341 protein in RSP 98.9 1.9E-09 6.6E-14 87.8 5.6 110 48-160 82-217 (258)
268 3uzu_A Ribosomal RNA small sub 98.9 6.7E-09 2.3E-13 85.5 8.7 92 32-126 24-125 (279)
269 3cvo_A Methyltransferase-like 98.9 1.8E-08 6.2E-13 78.6 10.6 112 32-157 13-152 (202)
270 1qyr_A KSGA, high level kasuga 98.9 3.5E-09 1.2E-13 85.9 6.4 76 47-126 19-101 (252)
271 3ll7_A Putative methyltransfer 98.8 3.1E-09 1.1E-13 91.6 5.7 81 45-126 89-174 (410)
272 4gqb_A Protein arginine N-meth 98.8 6.6E-09 2.3E-13 94.0 7.4 98 51-156 359-464 (637)
273 3lkd_A Type I restriction-modi 98.8 3.2E-08 1.1E-12 88.6 11.7 127 35-161 201-360 (542)
274 3v97_A Ribosomal RNA large sub 98.8 2.4E-08 8.2E-13 92.3 11.2 111 48-161 189-349 (703)
275 1m6y_A S-adenosyl-methyltransf 98.8 5.1E-09 1.7E-13 87.1 5.4 77 48-124 25-107 (301)
276 3evf_A RNA-directed RNA polyme 98.8 9.3E-09 3.2E-13 83.2 6.5 119 39-161 63-186 (277)
277 3ua3_A Protein arginine N-meth 98.8 5.4E-09 1.9E-13 94.7 5.4 101 50-156 410-531 (745)
278 3khk_A Type I restriction-modi 98.7 4.5E-08 1.5E-12 87.8 9.7 128 33-160 227-396 (544)
279 2oyr_A UPF0341 protein YHIQ; a 98.7 6.2E-09 2.1E-13 84.6 3.5 79 48-127 85-176 (258)
280 4fzv_A Putative methyltransfer 98.7 4.2E-08 1.4E-12 83.3 8.7 116 46-161 145-286 (359)
281 3s1s_A Restriction endonucleas 98.7 1.5E-07 5E-12 86.7 11.7 113 49-161 321-467 (878)
282 2k4m_A TR8_protein, UPF0146 pr 98.7 3.8E-08 1.3E-12 71.9 5.9 99 37-162 23-124 (153)
283 3c6k_A Spermine synthase; sper 98.6 8.4E-08 2.9E-12 81.4 8.5 112 48-159 204-331 (381)
284 3gcz_A Polyprotein; flavivirus 98.6 3.7E-08 1.3E-12 79.8 4.6 123 39-165 79-209 (282)
285 2efj_A 3,7-dimethylxanthine me 98.6 8.2E-07 2.8E-11 75.9 12.6 115 50-165 53-231 (384)
286 3b5i_A S-adenosyl-L-methionine 98.5 2.8E-07 9.7E-12 78.6 9.3 114 50-164 53-230 (374)
287 4auk_A Ribosomal RNA large sub 98.5 4.8E-07 1.7E-11 76.5 9.0 73 46-125 208-280 (375)
288 1wg8_A Predicted S-adenosylmet 98.3 1.9E-06 6.6E-11 70.1 8.7 75 47-124 20-98 (285)
289 3eld_A Methyltransferase; flav 98.3 7.1E-07 2.4E-11 72.8 5.9 115 46-165 78-199 (300)
290 3ufb_A Type I restriction-modi 98.3 8.2E-06 2.8E-10 73.0 12.8 130 31-160 197-363 (530)
291 1m6e_X S-adenosyl-L-methionnin 98.3 8.6E-07 2.9E-11 75.1 5.6 115 49-164 51-214 (359)
292 2wk1_A NOVP; transferase, O-me 98.2 5.9E-06 2E-10 67.7 9.7 103 49-160 106-245 (282)
293 2qy6_A UPF0209 protein YFCK; s 98.2 7.5E-07 2.6E-11 72.3 4.0 104 49-157 60-211 (257)
294 3lkz_A Non-structural protein 97.9 4.1E-05 1.4E-09 62.3 8.9 115 39-162 83-207 (321)
295 2px2_A Genome polyprotein [con 97.9 1.6E-05 5.5E-10 63.5 5.7 108 46-162 70-186 (269)
296 3p8z_A Mtase, non-structural p 97.9 0.00015 5.3E-09 57.1 10.6 116 39-164 67-191 (267)
297 2zig_A TTHA0409, putative modi 97.8 3.5E-05 1.2E-09 63.8 7.1 54 40-94 226-279 (297)
298 2oo3_A Protein involved in cat 97.8 2.3E-05 7.7E-10 63.9 4.8 122 38-169 82-208 (283)
299 2vz8_A Fatty acid synthase; tr 97.5 2.3E-05 7.7E-10 81.5 1.3 104 49-160 1240-1349(2512)
300 1i4w_A Mitochondrial replicati 97.5 0.00022 7.7E-09 60.2 7.2 58 50-108 59-117 (353)
301 1rjd_A PPM1P, carboxy methyl t 97.4 0.0013 4.4E-08 55.2 11.3 109 48-163 96-236 (334)
302 1g60_A Adenine-specific methyl 97.4 0.00033 1.1E-08 56.7 7.2 54 40-94 203-256 (260)
303 3tka_A Ribosomal RNA small sub 97.4 0.00018 6E-09 60.0 5.3 77 48-126 56-139 (347)
304 3g7u_A Cytosine-specific methy 97.4 0.0016 5.5E-08 55.6 11.0 75 51-128 3-84 (376)
305 3r24_A NSP16, 2'-O-methyl tran 97.3 0.001 3.4E-08 54.2 8.2 112 39-164 96-222 (344)
306 2c7p_A Modification methylase 97.3 0.00081 2.8E-08 56.3 8.0 74 50-128 11-84 (327)
307 1g55_A DNA cytosine methyltran 97.1 0.00048 1.6E-08 58.1 5.4 75 51-128 3-81 (343)
308 2uyo_A Hypothetical protein ML 96.8 0.011 3.7E-07 49.1 10.9 104 51-161 104-220 (310)
309 3ubt_Y Modification methylase 96.8 0.0033 1.1E-07 52.5 7.3 74 51-128 1-74 (331)
310 3qv2_A 5-cytosine DNA methyltr 96.8 0.0033 1.1E-07 52.6 7.2 109 49-161 9-131 (327)
311 4h0n_A DNMT2; SAH binding, tra 96.4 0.0041 1.4E-07 52.1 5.6 75 51-128 4-82 (333)
312 2qrv_A DNA (cytosine-5)-methyl 96.4 0.011 3.7E-07 48.7 7.8 77 49-128 15-96 (295)
313 1boo_A Protein (N-4 cytosine-s 96.3 0.0091 3.1E-07 49.8 7.2 54 40-94 243-296 (323)
314 1f8f_A Benzyl alcohol dehydrog 96.3 0.018 6.1E-07 48.8 9.1 97 47-160 188-290 (371)
315 3me5_A Cytosine-specific methy 96.2 0.0071 2.4E-07 53.2 6.0 78 51-128 89-182 (482)
316 2zig_A TTHA0409, putative modi 96.2 0.0041 1.4E-07 51.2 4.2 63 97-159 21-97 (297)
317 3vyw_A MNMC2; tRNA wobble urid 95.9 0.023 7.9E-07 46.8 7.4 104 51-162 98-227 (308)
318 2py6_A Methyltransferase FKBM; 95.9 0.013 4.4E-07 50.6 6.2 60 48-107 225-293 (409)
319 3fpc_A NADP-dependent alcohol 95.9 0.043 1.5E-06 46.1 9.3 99 46-161 163-268 (352)
320 1eg2_A Modification methylase 95.8 0.016 5.6E-07 48.2 6.2 54 40-94 233-289 (319)
321 4ej6_A Putative zinc-binding d 95.7 0.048 1.6E-06 46.2 9.0 98 46-160 179-285 (370)
322 1pl8_A Human sorbitol dehydrog 95.6 0.036 1.2E-06 46.7 7.8 98 46-160 168-274 (356)
323 2dph_A Formaldehyde dismutase; 95.6 0.092 3.1E-06 44.9 10.5 109 46-159 182-299 (398)
324 1kol_A Formaldehyde dehydrogen 95.5 0.12 4E-06 44.2 10.9 109 46-159 182-300 (398)
325 3two_A Mannitol dehydrogenase; 95.5 0.065 2.2E-06 44.9 9.0 94 46-162 173-268 (348)
326 3m6i_A L-arabinitol 4-dehydrog 95.4 0.11 3.8E-06 43.7 10.2 100 46-160 176-284 (363)
327 3tos_A CALS11; methyltransfera 95.1 0.23 7.8E-06 39.8 10.6 106 47-161 67-219 (257)
328 3ip1_A Alcohol dehydrogenase, 95.0 0.19 6.5E-06 43.0 10.6 102 47-160 211-319 (404)
329 3uko_A Alcohol dehydrogenase c 95.0 0.052 1.8E-06 46.0 6.9 97 47-160 191-296 (378)
330 1boo_A Protein (N-4 cytosine-s 94.9 0.023 7.9E-07 47.3 4.2 64 97-160 14-85 (323)
331 1uuf_A YAHK, zinc-type alcohol 94.8 0.1 3.5E-06 44.1 8.1 96 46-160 191-289 (369)
332 3s2e_A Zinc-containing alcohol 94.8 0.094 3.2E-06 43.7 7.8 97 46-160 163-264 (340)
333 1vj0_A Alcohol dehydrogenase, 94.5 0.16 5.4E-06 43.1 8.7 97 47-160 193-299 (380)
334 3uog_A Alcohol dehydrogenase; 94.4 0.18 6.2E-06 42.4 8.8 95 47-160 187-288 (363)
335 4a2c_A Galactitol-1-phosphate 94.4 0.36 1.2E-05 40.1 10.6 99 46-161 157-262 (346)
336 3jv7_A ADH-A; dehydrogenase, n 94.3 0.1 3.5E-06 43.5 7.0 97 46-160 168-271 (345)
337 1p0f_A NADP-dependent alcohol 94.2 0.17 5.8E-06 42.7 8.1 98 46-160 188-294 (373)
338 4dvj_A Putative zinc-dependent 94.1 0.19 6.6E-06 42.3 8.3 93 49-158 171-269 (363)
339 2fzw_A Alcohol dehydrogenase c 94.0 0.2 7E-06 42.2 8.3 97 47-160 188-293 (373)
340 1e3j_A NADP(H)-dependent ketos 93.9 0.38 1.3E-05 40.2 9.8 97 46-160 165-272 (352)
341 1pqw_A Polyketide synthase; ro 93.9 0.2 6.7E-06 38.1 7.3 93 46-159 35-137 (198)
342 4fgs_A Probable dehydrogenase 93.8 0.37 1.3E-05 39.0 9.1 107 50-159 29-159 (273)
343 2d8a_A PH0655, probable L-thre 93.8 0.27 9.4E-06 41.0 8.6 95 49-160 167-268 (348)
344 1zkd_A DUF185; NESG, RPR58, st 93.8 0.25 8.4E-06 42.1 8.2 45 50-94 81-133 (387)
345 2jhf_A Alcohol dehydrogenase E 93.7 0.22 7.4E-06 42.1 8.0 97 47-160 189-294 (374)
346 1cdo_A Alcohol dehydrogenase; 93.7 0.17 6E-06 42.7 7.4 95 47-160 190-295 (374)
347 1e3i_A Alcohol dehydrogenase, 93.7 0.12 4.3E-06 43.6 6.3 95 47-160 193-298 (376)
348 3grk_A Enoyl-(acyl-carrier-pro 93.5 0.45 1.5E-05 38.7 9.3 110 49-159 30-169 (293)
349 3fwz_A Inner membrane protein 93.5 0.77 2.6E-05 32.7 9.6 93 51-159 8-105 (140)
350 2b5w_A Glucose dehydrogenase; 93.1 0.37 1.3E-05 40.4 8.3 93 47-160 164-274 (357)
351 2eih_A Alcohol dehydrogenase; 93.1 0.55 1.9E-05 39.0 9.4 93 46-159 163-265 (343)
352 3oig_A Enoyl-[acyl-carrier-pro 93.1 0.66 2.3E-05 36.8 9.5 109 50-159 7-147 (266)
353 1rjw_A ADH-HT, alcohol dehydro 93.0 0.64 2.2E-05 38.6 9.7 94 46-160 161-262 (339)
354 3swr_A DNA (cytosine-5)-methyl 92.9 0.19 6.4E-06 48.1 6.8 75 51-128 541-631 (1002)
355 1v3u_A Leukotriene B4 12- hydr 92.9 0.74 2.5E-05 38.0 9.8 92 47-159 143-244 (333)
356 2h6e_A ADH-4, D-arabinose 1-de 92.8 0.31 1.1E-05 40.6 7.5 94 46-160 168-270 (344)
357 4b7c_A Probable oxidoreductase 92.8 0.42 1.4E-05 39.6 8.3 94 46-159 146-248 (336)
358 1piw_A Hypothetical zinc-type 92.7 0.16 5.4E-06 42.7 5.5 98 46-160 176-277 (360)
359 3pxx_A Carveol dehydrogenase; 92.4 0.84 2.9E-05 36.6 9.4 108 50-159 10-153 (287)
360 3gms_A Putative NADPH:quinone 92.3 0.29 1E-05 40.7 6.6 95 47-160 142-244 (340)
361 3qwb_A Probable quinone oxidor 92.3 0.64 2.2E-05 38.4 8.7 95 46-159 145-247 (334)
362 1jvb_A NAD(H)-dependent alcoho 92.3 0.54 1.9E-05 39.1 8.3 95 46-160 167-272 (347)
363 3jyn_A Quinone oxidoreductase; 92.1 0.57 2E-05 38.6 8.1 95 47-160 138-240 (325)
364 2j3h_A NADP-dependent oxidored 92.1 0.55 1.9E-05 39.0 8.1 93 47-159 153-255 (345)
365 3k31_A Enoyl-(acyl-carrier-pro 92.1 0.52 1.8E-05 38.3 7.8 109 50-159 30-168 (296)
366 3pvc_A TRNA 5-methylaminomethy 92.0 0.12 4.2E-06 47.5 4.2 104 49-157 58-209 (689)
367 3ek2_A Enoyl-(acyl-carrier-pro 91.9 0.56 1.9E-05 37.3 7.7 110 49-159 13-153 (271)
368 2hcy_A Alcohol dehydrogenase 1 91.9 0.59 2E-05 38.9 8.1 95 46-160 166-270 (347)
369 3ps9_A TRNA 5-methylaminomethy 91.7 0.3 1E-05 44.8 6.4 102 51-157 68-217 (676)
370 1yb5_A Quinone oxidoreductase; 91.7 0.76 2.6E-05 38.4 8.5 93 46-159 167-269 (351)
371 1qor_A Quinone oxidoreductase; 91.6 0.75 2.6E-05 37.8 8.3 93 46-159 137-239 (327)
372 3ado_A Lambda-crystallin; L-gu 91.6 1.8 6.1E-05 35.8 10.4 107 50-170 6-134 (319)
373 2hwk_A Helicase NSP2; rossman 91.5 0.51 1.7E-05 38.2 6.7 123 58-186 150-282 (320)
374 4eso_A Putative oxidoreductase 91.5 0.82 2.8E-05 36.2 8.2 108 49-159 7-138 (255)
375 2c0c_A Zinc binding alcohol de 91.4 0.93 3.2E-05 38.0 8.8 95 46-159 160-261 (362)
376 3llv_A Exopolyphosphatase-rela 91.2 0.89 3E-05 32.2 7.5 67 50-122 6-77 (141)
377 3ggo_A Prephenate dehydrogenas 91.2 1.9 6.4E-05 35.5 10.3 90 51-157 34-126 (314)
378 3iei_A Leucine carboxyl methyl 91.1 5.8 0.0002 32.9 14.6 109 49-164 90-234 (334)
379 3c85_A Putative glutathione-re 91.1 3.6 0.00012 30.4 11.6 95 50-160 39-140 (183)
380 4eez_A Alcohol dehydrogenase 1 91.1 2.2 7.6E-05 35.2 10.8 98 46-160 160-264 (348)
381 3gvc_A Oxidoreductase, probabl 91.0 1.5 5.1E-05 35.2 9.4 74 50-126 29-114 (277)
382 3goh_A Alcohol dehydrogenase, 91.0 0.26 8.9E-06 40.5 4.9 88 47-159 140-229 (315)
383 1eg2_A Modification methylase 91.0 0.12 4.2E-06 42.8 2.8 62 98-159 39-106 (319)
384 2j8z_A Quinone oxidoreductase; 90.9 1.2 4E-05 37.2 8.9 93 47-160 160-262 (354)
385 3ius_A Uncharacterized conserv 90.9 3 0.0001 33.1 11.1 63 51-124 6-72 (286)
386 3l9w_A Glutathione-regulated p 90.8 1.3 4.6E-05 38.0 9.3 94 50-159 4-102 (413)
387 3o26_A Salutaridine reductase; 90.8 3.2 0.00011 33.4 11.3 76 49-125 11-101 (311)
388 3nx4_A Putative oxidoreductase 90.7 1.3 4.3E-05 36.4 8.9 90 52-160 149-242 (324)
389 2cdc_A Glucose dehydrogenase g 90.6 1.3 4.4E-05 37.1 8.9 89 50-160 181-279 (366)
390 4eye_A Probable oxidoreductase 90.4 0.4 1.4E-05 39.9 5.6 93 47-159 157-257 (342)
391 4fs3_A Enoyl-[acyl-carrier-pro 90.3 1 3.5E-05 35.7 7.7 75 49-124 5-95 (256)
392 2gdz_A NAD+-dependent 15-hydro 90.3 1 3.5E-05 35.7 7.7 74 50-124 7-95 (267)
393 1wly_A CAAR, 2-haloacrylate re 90.1 1.5 5.3E-05 36.0 8.9 94 46-160 142-245 (333)
394 3edm_A Short chain dehydrogena 90.1 1 3.4E-05 35.7 7.5 110 49-159 7-143 (259)
395 2cf5_A Atccad5, CAD, cinnamyl 90.0 0.44 1.5E-05 39.9 5.5 96 47-160 177-276 (357)
396 3fbg_A Putative arginate lyase 90.0 1.3 4.5E-05 36.8 8.4 91 49-158 150-247 (346)
397 4ft4_B DNA (cytosine-5)-methyl 90.0 1.3 4.4E-05 41.3 9.1 52 51-105 213-270 (784)
398 1g60_A Adenine-specific methyl 90.0 0.16 5.6E-06 40.7 2.7 62 98-159 5-74 (260)
399 2dq4_A L-threonine 3-dehydroge 89.9 0.35 1.2E-05 40.2 4.8 94 49-160 164-263 (343)
400 1wma_A Carbonyl reductase [NAD 89.3 1.4 4.6E-05 34.8 7.7 110 49-159 3-138 (276)
401 3av4_A DNA (cytosine-5)-methyl 89.2 1.1 3.6E-05 44.3 8.1 76 50-128 851-942 (1330)
402 1yqd_A Sinapyl alcohol dehydro 89.2 0.89 3.1E-05 38.2 6.8 94 47-160 184-283 (366)
403 3ijr_A Oxidoreductase, short c 89.1 2 6.7E-05 34.7 8.6 110 49-159 46-182 (291)
404 4e6p_A Probable sorbitol dehyd 88.9 2.7 9.4E-05 33.1 9.2 73 50-125 8-92 (259)
405 4da9_A Short-chain dehydrogena 88.8 2.6 8.8E-05 33.8 9.1 76 49-125 28-117 (280)
406 1zcj_A Peroxisomal bifunctiona 88.7 6 0.0002 34.4 11.9 92 51-157 38-148 (463)
407 1lss_A TRK system potassium up 88.7 3.2 0.00011 28.8 8.7 68 50-122 4-76 (140)
408 1iz0_A Quinone oxidoreductase; 88.7 0.48 1.6E-05 38.6 4.6 92 47-159 123-218 (302)
409 4dcm_A Ribosomal RNA large sub 88.5 3.4 0.00012 34.8 10.0 96 49-160 38-137 (375)
410 2zb4_A Prostaglandin reductase 88.4 1.9 6.6E-05 35.8 8.4 95 46-159 155-260 (357)
411 4dkj_A Cytosine-specific methy 88.4 0.82 2.8E-05 39.1 6.1 44 51-94 11-60 (403)
412 1qsg_A Enoyl-[acyl-carrier-pro 88.4 2.5 8.5E-05 33.4 8.7 72 50-125 9-97 (265)
413 3krt_A Crotonyl COA reductase; 88.2 2.6 9E-05 36.4 9.3 96 46-159 225-344 (456)
414 3mog_A Probable 3-hydroxybutyr 88.2 12 0.0004 32.8 13.4 94 51-159 6-120 (483)
415 1xa0_A Putative NADPH dependen 88.0 0.81 2.8E-05 37.7 5.7 94 47-159 146-246 (328)
416 4dup_A Quinone oxidoreductase; 88.0 1.4 4.9E-05 36.6 7.3 95 47-160 165-266 (353)
417 3tqh_A Quinone oxidoreductase; 87.9 2.1 7.1E-05 35.1 8.1 93 46-159 149-245 (321)
418 3is3_A 17BETA-hydroxysteroid d 87.8 2.1 7.3E-05 34.0 8.0 109 50-159 18-152 (270)
419 4g81_D Putative hexonate dehyd 87.8 0.97 3.3E-05 36.1 5.8 77 49-126 8-97 (255)
420 4fn4_A Short chain dehydrogena 87.6 1.9 6.4E-05 34.4 7.4 75 49-124 6-93 (254)
421 3ew7_A LMO0794 protein; Q8Y8U8 87.4 2.7 9.4E-05 31.8 8.1 67 52-125 2-71 (221)
422 3r3s_A Oxidoreductase; structu 87.3 1.7 5.8E-05 35.2 7.1 109 50-159 49-185 (294)
423 3l4b_C TRKA K+ channel protien 86.8 5.8 0.0002 30.3 9.7 66 52-122 2-72 (218)
424 1id1_A Putative potassium chan 86.7 6.9 0.00024 27.9 9.6 96 51-159 4-105 (153)
425 1tt7_A YHFP; alcohol dehydroge 86.6 1.7 5.8E-05 35.7 6.9 95 47-160 147-248 (330)
426 2dpo_A L-gulonate 3-dehydrogen 86.5 6.3 0.00022 32.4 10.2 94 51-158 7-122 (319)
427 3v2g_A 3-oxoacyl-[acyl-carrier 86.0 3.9 0.00013 32.6 8.6 110 49-159 30-165 (271)
428 4gkb_A 3-oxoacyl-[acyl-carrier 85.9 1.2 4.2E-05 35.5 5.4 77 49-126 6-94 (258)
429 3u5t_A 3-oxoacyl-[acyl-carrier 85.9 1.7 5.8E-05 34.6 6.3 110 49-159 26-161 (267)
430 4a0s_A Octenoyl-COA reductase/ 85.7 3.7 0.00013 35.3 8.8 96 46-159 217-336 (447)
431 4e12_A Diketoreductase; oxidor 85.6 4.3 0.00015 32.6 8.7 92 51-156 5-118 (283)
432 2ew2_A 2-dehydropantoate 2-red 85.5 8.3 0.00029 31.0 10.5 93 51-159 4-108 (316)
433 3g0o_A 3-hydroxyisobutyrate de 85.4 5.3 0.00018 32.3 9.2 95 50-163 7-106 (303)
434 2zwa_A Leucine carboxyl methyl 85.3 3.8 0.00013 37.6 9.1 108 49-163 107-258 (695)
435 1ae1_A Tropinone reductase-I; 85.3 1.4 4.9E-05 35.1 5.6 75 50-125 21-109 (273)
436 3gqv_A Enoyl reductase; medium 85.2 2.1 7.2E-05 35.9 6.8 93 48-159 163-263 (371)
437 2f1k_A Prephenate dehydrogenas 85.1 8.8 0.0003 30.4 10.3 85 52-156 2-88 (279)
438 1cyd_A Carbonyl reductase; sho 84.9 9.9 0.00034 29.2 10.4 71 50-124 7-85 (244)
439 3gaz_A Alcohol dehydrogenase s 84.8 2.1 7.2E-05 35.5 6.6 91 47-159 148-246 (343)
440 2pd4_A Enoyl-[acyl-carrier-pro 84.7 2.7 9.3E-05 33.4 7.1 75 50-125 6-94 (275)
441 3abi_A Putative uncharacterize 84.4 1.8 6E-05 36.3 6.0 68 49-123 15-85 (365)
442 3imf_A Short chain dehydrogena 84.3 3.2 0.00011 32.6 7.3 74 50-124 6-92 (257)
443 3zwc_A Peroxisomal bifunctiona 84.3 16 0.00054 33.9 12.6 106 51-170 317-440 (742)
444 4hp8_A 2-deoxy-D-gluconate 3-d 84.3 5.8 0.0002 31.4 8.6 73 49-125 8-89 (247)
445 4g65_A TRK system potassium up 84.0 1.3 4.5E-05 38.6 5.2 68 50-122 3-75 (461)
446 3gg2_A Sugar dehydrogenase, UD 83.8 9 0.00031 33.1 10.4 103 51-159 3-122 (450)
447 3ucx_A Short chain dehydrogena 83.6 3.9 0.00013 32.3 7.5 74 50-124 11-97 (264)
448 3tjr_A Short chain dehydrogena 83.6 3.5 0.00012 33.4 7.4 76 49-125 30-118 (301)
449 2p91_A Enoyl-[acyl-carrier-pro 83.2 6.5 0.00022 31.4 8.8 75 50-125 21-109 (285)
450 3sju_A Keto reductase; short-c 83.2 4.2 0.00014 32.5 7.6 76 49-125 23-111 (279)
451 3qiv_A Short-chain dehydrogena 83.0 3.4 0.00011 32.3 6.9 76 49-125 8-96 (253)
452 1g0o_A Trihydroxynaphthalene r 82.8 4.2 0.00014 32.5 7.5 109 50-159 29-163 (283)
453 3v8b_A Putative dehydrogenase, 82.6 5.5 0.00019 31.9 8.1 76 49-125 27-115 (283)
454 3o38_A Short chain dehydrogena 82.2 4.6 0.00016 31.8 7.4 75 50-125 22-111 (266)
455 3h2s_A Putative NADH-flavin re 82.1 6.5 0.00022 29.7 8.1 98 52-158 2-103 (224)
456 3e8x_A Putative NAD-dependent 82.0 6.6 0.00023 30.1 8.2 70 49-124 20-93 (236)
457 2eez_A Alanine dehydrogenase; 81.9 0.91 3.1E-05 38.3 3.2 99 50-159 166-266 (369)
458 2vn8_A Reticulon-4-interacting 81.8 3.2 0.00011 34.8 6.6 95 47-159 181-280 (375)
459 2vhw_A Alanine dehydrogenase; 81.8 0.71 2.4E-05 39.1 2.5 100 49-159 167-268 (377)
460 3k6j_A Protein F01G10.3, confi 81.8 25 0.00084 30.5 12.2 100 51-165 55-172 (460)
461 3ksu_A 3-oxoacyl-acyl carrier 81.7 5 0.00017 31.7 7.4 109 50-159 11-147 (262)
462 3ic5_A Putative saccharopine d 81.5 8.2 0.00028 25.6 7.7 69 50-123 5-77 (118)
463 3c24_A Putative oxidoreductase 81.5 10 0.00035 30.3 9.3 84 51-156 12-98 (286)
464 2g5c_A Prephenate dehydrogenas 81.5 15 0.00051 29.1 10.3 89 52-158 3-95 (281)
465 3h7a_A Short chain dehydrogena 81.0 2.3 7.8E-05 33.5 5.1 76 49-125 6-93 (252)
466 3gaf_A 7-alpha-hydroxysteroid 81.0 4.1 0.00014 32.0 6.7 76 49-125 11-99 (256)
467 3ce6_A Adenosylhomocysteinase; 80.9 2.3 7.9E-05 37.4 5.5 90 47-160 271-362 (494)
468 3nyw_A Putative oxidoreductase 80.8 4.5 0.00015 31.7 6.8 75 50-125 7-97 (250)
469 2bgk_A Rhizome secoisolaricire 80.8 6.9 0.00024 30.8 8.0 74 50-124 16-101 (278)
470 1zk4_A R-specific alcohol dehy 80.8 5.4 0.00019 30.9 7.3 75 50-125 6-92 (251)
471 3ppi_A 3-hydroxyacyl-COA dehyd 80.7 5.3 0.00018 31.7 7.4 70 50-122 30-110 (281)
472 2i6t_A Ubiquitin-conjugating e 80.7 8.9 0.0003 31.3 8.7 97 49-159 13-125 (303)
473 2b4q_A Rhamnolipids biosynthes 80.5 4.4 0.00015 32.3 6.8 75 50-125 29-115 (276)
474 3lyl_A 3-oxoacyl-(acyl-carrier 80.4 4.6 0.00016 31.3 6.8 75 50-125 5-92 (247)
475 3pk0_A Short-chain dehydrogena 80.4 5.2 0.00018 31.6 7.1 75 50-125 10-98 (262)
476 2g1u_A Hypothetical protein TM 80.3 4.8 0.00017 28.9 6.4 69 49-122 18-91 (155)
477 3svt_A Short-chain type dehydr 80.3 5.6 0.00019 31.7 7.3 75 50-125 11-101 (281)
478 1pjc_A Protein (L-alanine dehy 80.2 0.91 3.1E-05 38.2 2.6 100 50-160 167-268 (361)
479 3rkr_A Short chain oxidoreduct 80.1 3.9 0.00013 32.3 6.3 76 49-125 28-116 (262)
480 3i83_A 2-dehydropantoate 2-red 80.0 5.2 0.00018 32.7 7.2 98 51-161 3-107 (320)
481 3dmg_A Probable ribosomal RNA 79.8 3.1 0.00011 35.2 5.8 105 39-159 34-139 (381)
482 3d1l_A Putative NADP oxidoredu 79.7 20 0.00068 28.1 10.4 95 50-163 10-106 (266)
483 1f0y_A HCDH, L-3-hydroxyacyl-C 79.5 6.3 0.00021 31.9 7.5 92 51-156 16-133 (302)
484 3tfo_A Putative 3-oxoacyl-(acy 79.4 4.1 0.00014 32.3 6.2 75 50-125 4-91 (264)
485 1zem_A Xylitol dehydrogenase; 79.2 7.7 0.00026 30.4 7.8 75 50-125 7-94 (262)
486 3hwr_A 2-dehydropantoate 2-red 79.1 19 0.00066 29.2 10.4 101 49-162 18-123 (318)
487 1yb1_A 17-beta-hydroxysteroid 79.0 6.6 0.00023 31.1 7.4 75 50-125 31-118 (272)
488 3trk_A Nonstructural polyprote 79.0 3.7 0.00013 32.9 5.5 57 114-170 210-270 (324)
489 3uve_A Carveol dehydrogenase ( 78.7 8 0.00027 30.8 7.8 75 50-125 11-114 (286)
490 3awd_A GOX2181, putative polyo 78.6 7 0.00024 30.4 7.4 74 50-124 13-99 (260)
491 4egf_A L-xylulose reductase; s 78.6 6 0.0002 31.3 6.9 75 50-125 20-108 (266)
492 3r1i_A Short-chain type dehydr 78.5 4 0.00014 32.6 5.9 76 49-125 31-119 (276)
493 3uf0_A Short-chain dehydrogena 78.4 6.1 0.00021 31.4 7.0 76 49-125 30-116 (273)
494 3pgx_A Carveol dehydrogenase; 78.4 8.2 0.00028 30.6 7.8 76 49-125 14-115 (280)
495 3ioy_A Short-chain dehydrogena 78.4 4.8 0.00016 32.9 6.5 75 50-125 8-97 (319)
496 3ged_A Short-chain dehydrogena 78.4 6.8 0.00023 30.9 7.1 70 51-124 3-84 (247)
497 1iy8_A Levodione reductase; ox 78.3 7.3 0.00025 30.7 7.4 74 50-124 13-101 (267)
498 3tox_A Short chain dehydrogena 78.1 3.8 0.00013 32.8 5.7 74 50-124 8-94 (280)
499 2jah_A Clavulanic acid dehydro 78.0 7.7 0.00026 30.2 7.4 75 50-125 7-94 (247)
500 3lf2_A Short chain oxidoreduct 78.0 7.6 0.00026 30.6 7.4 76 49-125 7-97 (265)
No 1
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.91 E-value=1.9e-23 Score=166.03 Aligned_cols=169 Identities=34% Similarity=0.745 Sum_probs=141.4
Q ss_pred CCCCChhhHHHHhccCC--CceeeeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHH
Q 025475 11 YNYGDALYWNARYVQEG--GSFDWYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMM 88 (252)
Q Consensus 11 ~~~~~~~~w~~~y~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a 88 (252)
+.|++.+||+++|.... ..+.|+.....+...+...++++.+|||+|||+|.++..+++.+..+++++|+|+.+++.+
T Consensus 2 ~~~~~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a 81 (215)
T 2pxx_A 2 SGYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAM 81 (215)
T ss_dssp GGGGCHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHH
T ss_pred CcccchhHHHHHhccCCCCCCcccccCHHHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHH
Confidence 46889999999998765 3478888888888999888888899999999999999999998755899999999999999
Q ss_pred HHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhhhcCCCC--------ChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 89 KMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTN--------APISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 89 ~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~~~~--------~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+++....++++++++|+.+++ +++++||+|+++.+++++.+... +..+...+++++.++|+|||.+++.++
T Consensus 82 ~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 82 QACYAHVPQLRWETMDVRKLD-FPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HHHTTTCTTCEEEECCTTSCC-SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHhcccCCCcEEEEcchhcCC-CCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 999876568999999999886 77789999999999988722110 145779999999999999999999999
Q ss_pred CChhhhhhhccccccceeEE
Q 025475 161 GDPKARMIHLKWKVYNWKIE 180 (252)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~ 180 (252)
..+......+......|...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~ 180 (215)
T 2pxx_A 161 AAPHFRTRHYAQAYYGWSLR 180 (215)
T ss_dssp CCHHHHHHHHCCGGGCEEEE
T ss_pred CCcHHHHHHHhccccCcEEE
Confidence 98877666664455556544
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.89 E-value=1.4e-24 Score=178.33 Aligned_cols=184 Identities=17% Similarity=0.237 Sum_probs=131.5
Q ss_pred HHHHHhhCCCCCcEEEEcccCcHhHHHHHHcC---CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCC
Q 025475 40 RPFVRKYIPTSSRVLMVGCGNALMSEDMVKDG---YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFED 113 (252)
Q Consensus 40 ~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~---~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~ 113 (252)
..++...++++.+|||+|||+|..+..+++.. ..+|+|+|+|+.|++.|+++++.. .+++++++|+.+++ +
T Consensus 61 ~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~-~-- 137 (261)
T 4gek_A 61 GMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA-I-- 137 (261)
T ss_dssp HHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC-C--
T ss_pred HHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc-c--
Confidence 34555668899999999999999999999862 348999999999999999987543 37999999999886 4
Q ss_pred CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhh-hhhhccccccceeEEEEEecCCCCCCC
Q 025475 114 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKA-RMIHLKWKVYNWKIELYIIARPGFEKP 192 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (252)
++||+|+++.++||+ +++++.+++++++++|+|||.+++.+...+.. ......... +. ......|+...
T Consensus 138 ~~~d~v~~~~~l~~~-----~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~--~~---~~~~~~g~s~~ 207 (261)
T 4gek_A 138 ENASMVVLNFTLQFL-----EPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNM--HH---DFKRANGYSEL 207 (261)
T ss_dssp CSEEEEEEESCGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHH--HH---HHHHHTTGGGS
T ss_pred cccccceeeeeeeec-----CchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHH--HH---HHHHHcCCCHH
Confidence 469999999999999 77888999999999999999999988654322 111110000 00 00112333322
Q ss_pred CC--CCCCCcccCCCcccCCCCCCccccccCCCCceEE------EEEEecCC
Q 025475 193 GG--CSSSMKSYLEPVPITDDGQLPAEFVLEDPDSHFI------YVCKKMND 236 (252)
Q Consensus 193 ~~--~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~~------~~~~K~~~ 236 (252)
.. ....++....+.+......+++++||..+.++|. ++++|+..
T Consensus 208 ei~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K~~~ 259 (261)
T 4gek_A 208 EISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQCFNFGSLVALKAED 259 (261)
T ss_dssp TTHHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEEEEEETTEEEEEEECCTT
T ss_pred HHHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEEEEEeccEEEEEEEEcCC
Confidence 21 1112234444555555666899999999887653 68899864
No 3
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.89 E-value=2.2e-22 Score=164.30 Aligned_cols=141 Identities=18% Similarity=0.285 Sum_probs=113.9
Q ss_pred CCCChhhHHHHhccCCCceeeeccchhhHHHHHhh--CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHH
Q 025475 12 NYGDALYWNARYVQEGGSFDWYQRYSALRPFVRKY--IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMK 89 (252)
Q Consensus 12 ~~~~~~~w~~~y~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~ 89 (252)
...+.+||+++|......+......+.+.+++... ..++.+|||+|||+|..+..+++.|. +|+|+|+|+.|++.|+
T Consensus 29 ~~~~~~~Wd~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~ 107 (252)
T 2gb4_A 29 QVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFF 107 (252)
T ss_dssp CCCCHHHHHHHHHHTCCTTCCTTCCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHH
T ss_pred ccCCHHHHHHHHhcCCCCcccCCCCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHH
Confidence 45578999999987655543333333455555443 24677999999999999999999987 8999999999999998
Q ss_pred Hhhc-------------------CCCCCeEEEccccCCCCCCC-CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcc
Q 025475 90 MKYE-------------------EIPQLKYLQMDVRDMSFFED-ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLL 149 (252)
Q Consensus 90 ~~~~-------------------~~~~v~~~~~d~~~~~~~~~-~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L 149 (252)
++.. ...+++++++|+.+++ ..+ ++||+|++..+++++ +++++..+++++.++|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~-~~~~~~FD~V~~~~~l~~l-----~~~~~~~~l~~~~~~L 181 (252)
T 2gb4_A 108 AEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP-RANIGKFDRIWDRGALVAI-----NPGDHDRYADIILSLL 181 (252)
T ss_dssp HHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG-GGCCCCEEEEEESSSTTTS-----CGGGHHHHHHHHHHTE
T ss_pred HhcccccccccccccccccccccCCCceEEEECccccCC-cccCCCEEEEEEhhhhhhC-----CHHHHHHHHHHHHHHc
Confidence 7653 1257999999999987 443 789999999999999 7788899999999999
Q ss_pred cCCcEEEEEE
Q 025475 150 KPGGIYMLIT 159 (252)
Q Consensus 150 ~~gG~l~i~~ 159 (252)
+|||++++.+
T Consensus 182 kpGG~l~l~~ 191 (252)
T 2gb4_A 182 RKEFQYLVAV 191 (252)
T ss_dssp EEEEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9999997654
No 4
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.82 E-value=5.3e-20 Score=145.56 Aligned_cols=114 Identities=19% Similarity=0.283 Sum_probs=96.3
Q ss_pred hHHHHHhh-CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--------------CCCCeEEEc
Q 025475 39 LRPFVRKY-IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--------------IPQLKYLQM 103 (252)
Q Consensus 39 l~~~~~~~-~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--------------~~~v~~~~~ 103 (252)
+.+++... ++++.+|||+|||+|..+..+++.|. +|+|+|+|+.|++.|+++... ..+++++++
T Consensus 11 l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 44455443 45678999999999999999999976 999999999999999988642 357999999
Q ss_pred cccCCCCCCC-CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 104 DVRDMSFFED-ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 104 d~~~~~~~~~-~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+.+++ +.+ ++||+|++..+++|+ +.+++.+++++++++|||||++++..
T Consensus 90 d~~~l~-~~~~~~fD~v~~~~~l~~l-----~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 90 DFFALT-ARDIGHCAAFYDRAAMIAL-----PADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp CCSSST-HHHHHSEEEEEEESCGGGS-----CHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred ccccCC-cccCCCEEEEEECcchhhC-----CHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 999987 544 789999999999999 77788899999999999999855544
No 5
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.82 E-value=6.6e-20 Score=148.01 Aligned_cols=139 Identities=21% Similarity=0.259 Sum_probs=113.4
Q ss_pred hhhHHHHhccCCCceeeeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC
Q 025475 16 ALYWNARYVQEGGSFDWYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI 95 (252)
Q Consensus 16 ~~~w~~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~ 95 (252)
.++|++.|......+........+..++.....++.+|||+|||+|.++..++..+. +++++|+|+.+++.++++....
T Consensus 33 ~~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~ 111 (235)
T 3lcc_A 33 EGGWEKCWEEEITPWDQGRATPLIVHLVDTSSLPLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSS 111 (235)
T ss_dssp HHHHHHHHHTTCCTTCCSSCCHHHHHHHHTTCSCCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCCCCcccCCCCHHHHHHHHhcCCCCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhcc
Confidence 578999998765554433334455666655444455999999999999999988754 8999999999999999998642
Q ss_pred ---CCCeEEEccccCCCCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 96 ---PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 96 ---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
.+++++++|+.+.+ +.++||+|++..+++|+ +++++..+++++.++|+|||.+++..+..
T Consensus 112 ~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 112 PKAEYFSFVKEDVFTWR--PTELFDLIFDYVFFCAI-----EPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp GGGGGEEEECCCTTTCC--CSSCEEEEEEESSTTTS-----CGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCCcceEEEECchhcCC--CCCCeeEEEEChhhhcC-----CHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 36899999999876 45689999999999999 66799999999999999999999987643
No 6
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.82 E-value=4.4e-20 Score=151.02 Aligned_cols=113 Identities=20% Similarity=0.349 Sum_probs=99.0
Q ss_pred hhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCe
Q 025475 37 SALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESF 116 (252)
Q Consensus 37 ~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 116 (252)
..+.+.+....+.+.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|++ .++++++++|+.+++ +++++|
T Consensus 27 ~~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~----~~~v~~~~~~~e~~~-~~~~sf 100 (257)
T 4hg2_A 27 RALFRWLGEVAPARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALR----HPRVTYAVAPAEDTG-LPPASV 100 (257)
T ss_dssp HHHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCC----CTTEEEEECCTTCCC-CCSSCE
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhh----cCCceeehhhhhhhc-ccCCcc
Confidence 456777877777778999999999999999999875 99999999999987754 368999999999998 899999
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
|+|++..++||+ +..+++++++|+|||||.|++..+..+
T Consensus 101 D~v~~~~~~h~~--------~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 101 DVAIAAQAMHWF--------DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp EEEEECSCCTTC--------CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred cEEEEeeehhHh--------hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 999999999887 356799999999999999999887643
No 7
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.80 E-value=3.1e-19 Score=144.40 Aligned_cols=117 Identities=31% Similarity=0.564 Sum_probs=104.6
Q ss_pred hhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCe
Q 025475 37 SALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESF 116 (252)
Q Consensus 37 ~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 116 (252)
..+...+...++++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++.. ..+++++++|+.+++ +++++|
T Consensus 41 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~-~~~~~f 117 (242)
T 3l8d_A 41 STIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGE-GPDLSFIKGDLSSLP-FENEQF 117 (242)
T ss_dssp TTHHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTC-BTTEEEEECBTTBCS-SCTTCE
T ss_pred HHHHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcc-cCCceEEEcchhcCC-CCCCCc
Confidence 456777888888889999999999999999999965 89999999999999998863 357999999999987 778899
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
|+|++..+++|+ .++..++++++++|+|||.+++.++...
T Consensus 118 D~v~~~~~l~~~-------~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 118 EAIMAINSLEWT-------EEPLRALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp EEEEEESCTTSS-------SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred cEEEEcChHhhc-------cCHHHHHHHHHHHhCCCeEEEEEEcCCc
Confidence 999999999999 8889999999999999999999886543
No 8
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.80 E-value=5e-19 Score=144.30 Aligned_cols=111 Identities=23% Similarity=0.363 Sum_probs=98.5
Q ss_pred HHHhhCC--CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEE
Q 025475 42 FVRKYIP--TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAV 119 (252)
Q Consensus 42 ~~~~~~~--~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v 119 (252)
.+...++ ++.+|||+|||+|.++..+++.+..+++++|+|+.+++.++++.. ..+++++++|+.+++ +++++||+|
T Consensus 35 ~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~-~~~~~fD~v 112 (253)
T 3g5l_A 35 ELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT-SPVVCYEQKAIEDIA-IEPDAYNVV 112 (253)
T ss_dssp HHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC-CTTEEEEECCGGGCC-CCTTCEEEE
T ss_pred HHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc-cCCeEEEEcchhhCC-CCCCCeEEE
Confidence 3444444 677999999999999999999976699999999999999999986 458999999999887 778899999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
++..+++|+ .++..++++++++|+|||.+++....
T Consensus 113 ~~~~~l~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 113 LSSLALHYI-------ASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp EEESCGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEchhhhhh-------hhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 999999999 88999999999999999999997643
No 9
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.79 E-value=3.6e-19 Score=144.27 Aligned_cols=136 Identities=14% Similarity=0.188 Sum_probs=98.5
Q ss_pred ChhhHHHHhccCCCceeeeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC
Q 025475 15 DALYWNARYVQEGGSFDWYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE 94 (252)
Q Consensus 15 ~~~~w~~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~ 94 (252)
+.+||+..................+.+.+... .++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~ 86 (250)
T 2p7i_A 9 DQEIKDTAGHKYAYNFDFDVMHPFMVRAFTPF-FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD 86 (250)
T ss_dssp --------------CHHHHTHHHHHHHHHGGG-CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS
T ss_pred CHHHHhhHHHHhcCccchhhHHHHHHHHHHhh-cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC
Confidence 35677765443322111111112234444443 3566999999999999999998865 899999999999999998754
Q ss_pred CCCCeEEEccccCCCCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHH-HcccCCcEEEEEEcCCh
Q 025475 95 IPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVS-RLLKPGGIYMLITYGDP 163 (252)
Q Consensus 95 ~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~-~~L~~gG~l~i~~~~~~ 163 (252)
+++++++|+.+.. ++++||+|++..+++|+ .++..++++++ ++|+|||.+++.++...
T Consensus 87 --~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~-------~~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 87 --GITYIHSRFEDAQ--LPRRYDNIVLTHVLEHI-------DDPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp --CEEEEESCGGGCC--CSSCEEEEEEESCGGGC-------SSHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred --CeEEEEccHHHcC--cCCcccEEEEhhHHHhh-------cCHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 7899999998873 66789999999999999 78899999999 99999999999886644
No 10
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.79 E-value=1.1e-19 Score=149.31 Aligned_cols=145 Identities=17% Similarity=0.166 Sum_probs=106.0
Q ss_pred CCCChhhHHHHhccCCCce------eeeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHH
Q 025475 12 NYGDALYWNARYVQEGGSF------DWYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAI 85 (252)
Q Consensus 12 ~~~~~~~w~~~y~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i 85 (252)
.|+...||+..|......+ .|. ...+.+++.....++.+|||+|||+|.++..++..+..+|+|+|+|+.|+
T Consensus 14 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l 91 (263)
T 2a14_A 14 HFLPRDYLATYYSFDGSPSPEAEMLKFN--LECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNR 91 (263)
T ss_dssp HCCHHHHHHHHCCCCCSCCHHHHHHHHH--HHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHH
T ss_pred ccCHHHHHHHhcCCCcccchhhHHHHHH--HHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHH
Confidence 3566789999887654432 121 11233333333346679999999999888877777766899999999999
Q ss_pred HHHHHhhcCCC-------------------------------CCe-EEEccccCCCCC---CCCCeeEEEeccchhhhcC
Q 025475 86 DMMKMKYEEIP-------------------------------QLK-YLQMDVRDMSFF---EDESFDAVIDKGTLDSLMC 130 (252)
Q Consensus 86 ~~a~~~~~~~~-------------------------------~v~-~~~~d~~~~~~~---~~~~~D~v~~~~~l~~~~~ 130 (252)
+.++++++..+ +++ ++++|+.+..++ ..++||+|+++.++||+
T Consensus 92 ~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i-- 169 (263)
T 2a14_A 92 EELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECA-- 169 (263)
T ss_dssp HHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHH--
T ss_pred HHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHh--
Confidence 99998764321 122 889999874212 35689999999999986
Q ss_pred CCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 131 GTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 131 ~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
.++.++..+++++++++|||||.+++....
T Consensus 170 -~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 170 -CCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp -CSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred -cCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 223478889999999999999999998743
No 11
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.79 E-value=2e-18 Score=137.39 Aligned_cols=143 Identities=15% Similarity=0.226 Sum_probs=111.6
Q ss_pred CCCChhhHHHHhccCCCceeeeccc---hhhHHHHHhhC--CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHH
Q 025475 12 NYGDALYWNARYVQEGGSFDWYQRY---SALRPFVRKYI--PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAID 86 (252)
Q Consensus 12 ~~~~~~~w~~~y~~~~~~~~~~~~~---~~l~~~~~~~~--~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~ 86 (252)
...+.++|++.|... ..+...... ..+..++...+ .++.+|||+|||+|.++..+++.+. +++++|+++.+++
T Consensus 10 ~~~~~~~~~~~~~~~-~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~ 87 (216)
T 3ofk_A 10 VDNTYQSLERELAND-DPWRLDDNPFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIG 87 (216)
T ss_dssp CSSHHHHHHHHHTSS-SGGGTTTCHHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHH
T ss_pred ecchHHHHHHHhcCC-CCcccccCHhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHH
Confidence 345678899988764 222221111 12334444333 3456999999999999999999864 9999999999999
Q ss_pred HHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 87 MMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 87 ~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
.++++....++++++++|+.+.+ ++++||+|+++.+++|+ ++++...++++++.++|+|||.+++.+...
T Consensus 88 ~a~~~~~~~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~~~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 88 RACQRTKRWSHISWAATDILQFS--TAELFDLIVVAEVLYYL----EDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHHTTTCSSEEEEECCTTTCC--CSCCEEEEEEESCGGGS----SSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHhcccCCCeEEEEcchhhCC--CCCCccEEEEccHHHhC----CCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 99999877678999999999986 57789999999999999 224556788999999999999999987543
No 12
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.79 E-value=5.9e-19 Score=141.88 Aligned_cols=135 Identities=28% Similarity=0.525 Sum_probs=100.0
Q ss_pred hhhHHHHhccCCCceeeeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC
Q 025475 16 ALYWNARYVQEGGSFDWYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI 95 (252)
Q Consensus 16 ~~~w~~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~ 95 (252)
.+||+..+...... ...+...+...++++.+|||+|||+|.++..++..+. +++++|+++.+++.++++....
T Consensus 3 ~~yw~~~~~~~~~~------~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~ 75 (235)
T 3sm3_A 3 ESYWEKVSGKNIPS------SLDLYPIIHNYLQEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSP 75 (235)
T ss_dssp ---------------------CCCCTTHHHHCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCC
T ss_pred hhHHHHHhhccCCC------HHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhc
Confidence 57898877643221 1122334555677888999999999999999999965 9999999999999999988543
Q ss_pred C-------CCeEEEccccCCCCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 96 P-------QLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 96 ~-------~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+ ++.++++|+.+++ +++++||+|++..+++|+ +++.....++++++++|+|||.+++.++..
T Consensus 76 ~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 76 GLNQKTGGKAEFKVENASSLS-FHDSSFDFAVMQAFLTSV----PDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp SCCSSSSCEEEEEECCTTSCC-SCTTCEEEEEEESCGGGC----CCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred CCccccCcceEEEEecccccC-CCCCceeEEEEcchhhcC----CCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 2 4789999999887 778899999999999998 333445599999999999999999988654
No 13
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.79 E-value=6.2e-18 Score=131.83 Aligned_cols=112 Identities=20% Similarity=0.398 Sum_probs=98.1
Q ss_pred HHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEE
Q 025475 41 PFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVI 120 (252)
Q Consensus 41 ~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~ 120 (252)
.++...++++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++. ++++++++|+.+.+ +++++||+|+
T Consensus 38 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~---~~~~~~~~d~~~~~-~~~~~~D~i~ 112 (195)
T 3cgg_A 38 RLIDAMAPRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF---PEARWVVGDLSVDQ-ISETDFDLIV 112 (195)
T ss_dssp HHHHHHSCTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC---TTSEEEECCTTTSC-CCCCCEEEEE
T ss_pred HHHHHhccCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC---CCCcEEEcccccCC-CCCCceeEEE
Confidence 45666677888999999999999999999864 9999999999999999986 35899999999876 6778899999
Q ss_pred ec-cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 121 DK-GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 121 ~~-~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
++ .+++|+ +.++...+++++.++|+|||.+++.....
T Consensus 113 ~~~~~~~~~-----~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 113 SAGNVMGFL-----AEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp ECCCCGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred ECCcHHhhc-----ChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 98 688888 67788999999999999999999977554
No 14
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.78 E-value=2e-19 Score=143.46 Aligned_cols=109 Identities=18% Similarity=0.265 Sum_probs=96.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
+.++.+|||+|||+|.++..+++.+ ..+++++|+|+.+++.+++++.. .++++++++|+.+.+ +++++||+|++.
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~ 113 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP-LPDNTVDFIFMA 113 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS-SCSSCEEEEEEE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC-CCCCCeeEEEee
Confidence 4567799999999999999999884 45999999999999999998743 347999999999887 778899999999
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
.+++|+ .++..+++++.++|+|||.+++.++...
T Consensus 114 ~~l~~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 114 FTFHEL-------SEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp SCGGGC-------SSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred hhhhhc-------CCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 999999 7889999999999999999999886543
No 15
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.78 E-value=2.7e-18 Score=140.80 Aligned_cols=137 Identities=18% Similarity=0.290 Sum_probs=109.8
Q ss_pred hhhHHHHhccCCCceeeeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC
Q 025475 16 ALYWNARYVQEGGSFDWYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI 95 (252)
Q Consensus 16 ~~~w~~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~ 95 (252)
..+|+..+..... .|......+...+....+++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++..
T Consensus 19 a~~yd~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~-- 93 (263)
T 3pfg_A 19 AELYDLVHQGKGK--DYHREAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP-- 93 (263)
T ss_dssp HHHHHHHHHHTTC--CHHHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT--
T ss_pred HHHHHHHhhcCCC--CHHHHHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC--
Confidence 4566665543211 222333456667777777788999999999999999999865 89999999999999999864
Q ss_pred CCCeEEEccccCCCCCCCCCeeEEEecc-chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 96 PQLKYLQMDVRDMSFFEDESFDAVIDKG-TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 96 ~~v~~~~~d~~~~~~~~~~~~D~v~~~~-~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
+++++++|+.+++ . +++||+|++.. +++|+ +++++...++++++++|+|||.+++..+..+.
T Consensus 94 -~~~~~~~d~~~~~-~-~~~fD~v~~~~~~l~~~----~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 156 (263)
T 3pfg_A 94 -DAVLHHGDMRDFS-L-GRRFSAVTCMFSSIGHL----AGQAELDAALERFAAHVLPDGVVVVEPWWFPE 156 (263)
T ss_dssp -TSEEEECCTTTCC-C-SCCEEEEEECTTGGGGS----CHHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred -CCEEEECChHHCC-c-cCCcCEEEEcCchhhhc----CCHHHHHHHHHHHHHhcCCCcEEEEEeccChh
Confidence 7899999999987 4 67899999998 99998 33467889999999999999999997665444
No 16
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.78 E-value=7.7e-19 Score=138.36 Aligned_cols=135 Identities=20% Similarity=0.336 Sum_probs=104.5
Q ss_pred hHHHHhccCCCceeeeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-C
Q 025475 18 YWNARYVQEGGSFDWYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-P 96 (252)
Q Consensus 18 ~w~~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~-~ 96 (252)
||+++|..... .|..........+...++++ +|||+|||+|.++..+++.+. +++++|+|+.+++.++++.... .
T Consensus 1 ~W~~~y~~~~~--~~~~~~~~~l~~~~~~~~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~ 76 (202)
T 2kw5_A 1 MWDERFSQSEY--VYGTEPNDFLVSVANQIPQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV 76 (202)
T ss_dssp CCCCCCCCCCC--CCCCCCCSSHHHHHHHSCSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC
T ss_pred Chhhhhcccch--hhccCchHHHHHHHHhCCCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC
Confidence 57777765432 23223333333333456667 999999999999999998865 9999999999999999987532 2
Q ss_pred CCeEEEccccCCCCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 97 QLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 97 ~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
++.++++|+.+.+ +++++||+|++.. .|+ +..+...+++++.++|+|||.+++.++....
T Consensus 77 ~~~~~~~d~~~~~-~~~~~fD~v~~~~--~~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 77 KITTVQSNLADFD-IVADAWEGIVSIF--CHL-----PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp CEEEECCBTTTBS-CCTTTCSEEEEEC--CCC-----CHHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred ceEEEEcChhhcC-CCcCCccEEEEEh--hcC-----CHHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 7899999999887 7778999999954 344 4578999999999999999999998876443
No 17
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.78 E-value=2.2e-18 Score=135.14 Aligned_cols=133 Identities=21% Similarity=0.376 Sum_probs=107.6
Q ss_pred CCCChhhHHHHhccCCCceeeeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHh
Q 025475 12 NYGDALYWNARYVQEGGSFDWYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMK 91 (252)
Q Consensus 12 ~~~~~~~w~~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~ 91 (252)
.+...+||+..|...... ..+...+. ..++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~-------~~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~ 73 (199)
T 2xvm_A 4 VIRDENYFTDKYELTRTH-------SEVLEAVK--VVKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERI 73 (199)
T ss_dssp CCCCTTHHHHHHTCCCCC-------HHHHHHTT--TSCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHH
T ss_pred EEechHHHhhhhcccccc-------HHHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHH
Confidence 356778999988654221 12333332 23566999999999999999999865 999999999999999998
Q ss_pred hcC--CCCCeEEEccccCCCCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 92 YEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 92 ~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
... .++++++++|+.+.+ + +++||+|++..+++|+ ++++...+++++.++|+|||.+++.+..
T Consensus 74 ~~~~~~~~~~~~~~d~~~~~-~-~~~~D~v~~~~~l~~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 74 KSIENLDNLHTRVVDLNNLT-F-DRQYDFILSTVVLMFL-----EAKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp HHHHTCTTEEEEECCGGGCC-C-CCCEEEEEEESCGGGS-----CGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred HHhCCCCCcEEEEcchhhCC-C-CCCceEEEEcchhhhC-----CHHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 743 347899999999987 5 7789999999999999 6678999999999999999998887643
No 18
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.77 E-value=1.2e-18 Score=141.91 Aligned_cols=107 Identities=14% Similarity=0.239 Sum_probs=96.4
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
.++.+|||+|||+|.++..+++.+..+++++|+|+.+++.+++++...++++++++|+.+.+ +++++||+|++..+++|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT-LPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC-CCSSCEEEEEEESCGGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCC-CCCCCeEEEEEcchhhh
Confidence 35679999999999999999888655799999999999999999865567899999999887 77789999999999999
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+ +.+++..++++++++|+|||.+++.++
T Consensus 171 ~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 171 L-----TDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp S-----CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-----CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 9 667899999999999999999999885
No 19
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.77 E-value=1.1e-18 Score=141.33 Aligned_cols=108 Identities=18% Similarity=0.245 Sum_probs=94.3
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
++.+|||+|||+|.++..+++.+..+++++|+|+.+++.+++++... .+++++++|+.+.+ +.+++||+|++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT-PEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC-CCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC-CCCCCEEEEEEcchhh
Confidence 46799999999999999998886569999999999999999988643 36889999998887 6677899999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
|+ +.+....+++++.++|+|||.+++.++..
T Consensus 158 ~~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 158 HL-----TDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp GS-----CHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred hC-----CHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 99 55557799999999999999999987543
No 20
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.77 E-value=3.4e-18 Score=135.97 Aligned_cols=108 Identities=18% Similarity=0.202 Sum_probs=95.1
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
++++.+|||+|||+|.++..+++.+. +++++|+++.+++.+++ ...++++++++|+.++ .++++||+|++..+++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~--~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~ 118 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR--HGLDNVEFRQQDLFDW--TPDRQWDAVFFAHWLA 118 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG--GCCTTEEEEECCTTSC--CCSSCEEEEEEESCGG
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh--cCCCCeEEEecccccC--CCCCceeEEEEechhh
Confidence 45667999999999999999999865 99999999999999998 3335799999999887 4678999999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
|+ +.+....++++++++|+|||.+++.++..+.
T Consensus 119 ~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 151 (218)
T 3ou2_A 119 HV-----PDDRFEAFWESVRSAVAPGGVVEFVDVTDHE 151 (218)
T ss_dssp GS-----CHHHHHHHHHHHHHHEEEEEEEEEEEECCCC
T ss_pred cC-----CHHHHHHHHHHHHHHcCCCeEEEEEeCCCCc
Confidence 99 5555799999999999999999999987654
No 21
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.76 E-value=6.7e-18 Score=134.65 Aligned_cols=104 Identities=17% Similarity=0.223 Sum_probs=92.2
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhhh
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 128 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~ 128 (252)
++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++.. .+++++++|+.+++ .+ ++||+|++..+++|+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~--~~~~~~~~d~~~~~-~~-~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP--KEFSITEGDFLSFE-VP-TSIDTIVSTYAFHHL 119 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC--TTCCEESCCSSSCC-CC-SCCSEEEEESCGGGS
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC--CceEEEeCChhhcC-CC-CCeEEEEECcchhcC
Confidence 677999999999999999999865 99999999999999999876 57899999999987 55 899999999999999
Q ss_pred cCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 129 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 129 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+......+++++.++|+|||.+++.++..
T Consensus 120 -----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 120 -----TDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp -----CHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred -----ChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 44444559999999999999999988543
No 22
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.76 E-value=7.8e-18 Score=132.67 Aligned_cols=104 Identities=14% Similarity=0.283 Sum_probs=94.8
Q ss_pred CCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhhhc
Q 025475 50 SSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLM 129 (252)
Q Consensus 50 ~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~ 129 (252)
+.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++. ++++++++|+.+++ +++++||+|++..+++|+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~- 115 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH---PSVTFHHGTITDLS-DSPKRWAGLLAWYSLIHM- 115 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC---TTSEEECCCGGGGG-GSCCCEEEEEEESSSTTC-
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC---CCCeEEeCcccccc-cCCCCeEEEEehhhHhcC-
Confidence 67999999999999999999865 9999999999999999885 47899999999987 778899999999999999
Q ss_pred CCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 130 CGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 130 ~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
+.+++..++++++++|+|||.+++..+..+
T Consensus 116 ----~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 116 ----GPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp ----CTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred ----CHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 666999999999999999999999886553
No 23
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.76 E-value=7.5e-18 Score=133.62 Aligned_cols=111 Identities=21% Similarity=0.307 Sum_probs=96.8
Q ss_pred HHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEE
Q 025475 40 RPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAV 119 (252)
Q Consensus 40 ~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v 119 (252)
...+...++++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++. ++.++++|+.+++ .+++||+|
T Consensus 34 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~~~~~~d~~~~~--~~~~fD~v 106 (211)
T 3e23_A 34 LTKFLGELPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL----GRPVRTMLFHQLD--AIDAYDAV 106 (211)
T ss_dssp HHHHHTTSCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH----TSCCEECCGGGCC--CCSCEEEE
T ss_pred HHHHHHhcCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc----CCceEEeeeccCC--CCCcEEEE
Confidence 334444567788999999999999999999865 9999999999999999987 5688899998886 67889999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
++..+++|+ +.+++..++++++++|+|||.+++.....
T Consensus 107 ~~~~~l~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 107 WAHACLLHV-----PRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp EECSCGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EecCchhhc-----CHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 999999999 66699999999999999999999987543
No 24
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.76 E-value=4.6e-18 Score=139.21 Aligned_cols=109 Identities=18% Similarity=0.293 Sum_probs=98.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
+.++.+|||+|||+|.++..+++....+++++|+|+.+++.++++....++++++++|+.+.+ +++++||+|++..+++
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE-FPENNFDLIYSRDAIL 131 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC-CCTTCEEEEEEESCGG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC-CCCCcEEEEeHHHHHH
Confidence 346779999999999999999987334999999999999999999866578999999999987 7788999999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
|+ ++.++..++++++++|+|||.+++.++.
T Consensus 132 ~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 132 AL-----SLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp GS-----CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hc-----ChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 99 8899999999999999999999998854
No 25
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.76 E-value=1.6e-18 Score=142.06 Aligned_cols=146 Identities=15% Similarity=0.183 Sum_probs=107.5
Q ss_pred CCChhhHHHHhccCCCcee--eecc--chhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHH
Q 025475 13 YGDALYWNARYVQEGGSFD--WYQR--YSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMM 88 (252)
Q Consensus 13 ~~~~~~w~~~y~~~~~~~~--~~~~--~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a 88 (252)
|...+||+..|......+. +... ...+..++.....++.+|||+|||+|.++..++..+..+|+++|+|+.+++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a 95 (265)
T 2i62_A 16 FNPRDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCLGAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWEL 95 (265)
T ss_dssp CCHHHHHHHHHCCCSSCHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHH
T ss_pred cCHHHHHHHHhCcCCcchhHHHHHHhhHHHHHHHhcccccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHH
Confidence 5556799998876544321 1111 01222333332345669999999999999998887655899999999999999
Q ss_pred HHhhcCCCC-------------------------------C-eEEEccccCCCCCCC---CCeeEEEeccchhhhcCCCC
Q 025475 89 KMKYEEIPQ-------------------------------L-KYLQMDVRDMSFFED---ESFDAVIDKGTLDSLMCGTN 133 (252)
Q Consensus 89 ~~~~~~~~~-------------------------------v-~~~~~d~~~~~~~~~---~~~D~v~~~~~l~~~~~~~~ 133 (252)
++++...+. + +++++|+.+....++ ++||+|++..+++++ .+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~---~~ 172 (265)
T 2i62_A 96 QKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAA---CP 172 (265)
T ss_dssp HHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHH---CS
T ss_pred HHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhh---cC
Confidence 998865331 6 899999988652344 789999999999954 11
Q ss_pred ChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 134 APISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 134 ~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
...++..++++++++|+|||.+++.+..
T Consensus 173 ~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 173 DLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred ChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 2268999999999999999999998743
No 26
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.76 E-value=7.7e-18 Score=135.60 Aligned_cols=109 Identities=19% Similarity=0.362 Sum_probs=96.7
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
.++.+|||+|||+|.++..+++.. ..+++++|+|+.+++.+++++...++++++++|+.+.+ +. ++||+|++..+++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~-~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYD-FE-EKYDMVVSALSIH 120 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCC-CC-SCEEEEEEESCGG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccC-CC-CCceEEEEeCccc
Confidence 466799999999999999999984 45999999999999999999876668999999999987 45 7899999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
|+ ++.....++++++++|+|||.+++.+...+
T Consensus 121 ~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 121 HL-----EDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp GS-----CHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred cC-----CHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 99 656667899999999999999999886644
No 27
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.76 E-value=5.5e-18 Score=140.61 Aligned_cols=116 Identities=21% Similarity=0.358 Sum_probs=99.4
Q ss_pred HHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCe
Q 025475 40 RPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESF 116 (252)
Q Consensus 40 ~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~ 116 (252)
..++....+++.+|||+|||+|.++..+++.+. +++++|+|+.+++.+++++... ++++++++|+.+.+.+.+++|
T Consensus 59 ~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~f 137 (285)
T 4htf_A 59 DRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPV 137 (285)
T ss_dssp HHHHHHTCSSCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCE
T ss_pred HHHHHhcCCCCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCc
Confidence 344554445567999999999999999999865 9999999999999999988543 468999999998864677899
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
|+|++..+++|+ .++..+++++.++|+|||.+++..+...
T Consensus 138 D~v~~~~~l~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (285)
T 4htf_A 138 DLILFHAVLEWV-------ADPRSVLQTLWSVLRPGGVLSLMFYNAH 177 (285)
T ss_dssp EEEEEESCGGGC-------SCHHHHHHHHHHTEEEEEEEEEEEEBHH
T ss_pred eEEEECchhhcc-------cCHHHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 999999999999 7889999999999999999999886543
No 28
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.76 E-value=6.3e-18 Score=137.13 Aligned_cols=112 Identities=13% Similarity=0.139 Sum_probs=96.5
Q ss_pred hhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCC-----CCCeeEE
Q 025475 45 KYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFE-----DESFDAV 119 (252)
Q Consensus 45 ~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~D~v 119 (252)
..+.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++... .+++++++|+.+.+ .. ...||+|
T Consensus 52 ~~~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~~-~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 52 LLFNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA-ANISYRLLDGLVPE-QAAQIHSEIGDANI 128 (245)
T ss_dssp TTSCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC-TTEEEEECCTTCHH-HHHHHHHHHCSCEE
T ss_pred hccCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc-cCceEEECcccccc-cccccccccCccEE
Confidence 3356778999999999999999999876 999999999999999998843 47999999998864 22 1248999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
++..++||+ ++++...++++++++|+|||++++.++..+.
T Consensus 129 ~~~~~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 129 YMRTGFHHI-----PVEKRELLGQSLRILLGKQGAMYLIELGTGC 168 (245)
T ss_dssp EEESSSTTS-----CGGGHHHHHHHHHHHHTTTCEEEEEEECTTH
T ss_pred EEcchhhcC-----CHHHHHHHHHHHHHHcCCCCEEEEEeCCccc
Confidence 999999999 6669999999999999999999999877554
No 29
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.75 E-value=6.8e-18 Score=140.82 Aligned_cols=106 Identities=17% Similarity=0.250 Sum_probs=94.6
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--C-CCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
+.++.+|||+|||+|.++..+++. +. +++++|+|+.+++.++++... . ++++++++|+.+++ +++++||+|++.
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~ 157 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-CEDNSYDFIWSQ 157 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-SCTTCEEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-CCCCCEeEEEec
Confidence 357779999999999999999987 54 999999999999999988743 2 47999999999987 788899999999
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
.+++|+ .++..++++++++|+|||.+++.++.
T Consensus 158 ~~l~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 158 DAFLHS-------PDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp SCGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred chhhhc-------CCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 999999 67899999999999999999998754
No 30
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.75 E-value=3.7e-18 Score=139.75 Aligned_cols=105 Identities=23% Similarity=0.346 Sum_probs=93.6
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEeccch
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 125 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l 125 (252)
.++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++... .+++.++++|+.+++ +++++||+|++..++
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~fD~V~~~~~l 113 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-FTDERFHIVTCRIAA 113 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SCTTCEEEEEEESCG
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC-CCCCCEEEEEEhhhh
Confidence 4677999999999999999998864 999999999999999998743 347999999999987 788899999999999
Q ss_pred hhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 126 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+|+ .++..++++++++|+|||.+++.++.
T Consensus 114 ~~~-------~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 114 HHF-------PNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp GGC-------SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred Hhc-------CCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 999 78899999999999999999997654
No 31
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.75 E-value=1.1e-17 Score=137.49 Aligned_cols=105 Identities=18% Similarity=0.309 Sum_probs=93.7
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
++++.+|||+|||+|.++..+++.+..+++++|+|+.+++.+++++... ++++++++|+.+++ +++++||+|++..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP-FRNEELDLIWSEG 122 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-CCTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC-CCCCCEEEEEEcC
Confidence 3577899999999999999999987669999999999999999987543 46999999999987 7788999999999
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+++|+ ++..+++++.++|+|||.+++.+.
T Consensus 123 ~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 123 AIYNI--------GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp CGGGT--------CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred Cceec--------CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 99998 367899999999999999999875
No 32
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.75 E-value=1.4e-17 Score=132.25 Aligned_cols=106 Identities=20% Similarity=0.274 Sum_probs=94.3
Q ss_pred CcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 51 SRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
.+|||+|||+|.++..+++....+++++|+++.+++.+++++... ++++++++|+.+++ +++++||+|++..+++|
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP-IEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-SCTTCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-CCcccccEEEECchHhh
Confidence 399999999999999999874349999999999999999997542 37999999999987 78889999999999999
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
+ .++..++++++++|+|||.+++.+...+.
T Consensus 124 ~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 153 (219)
T 3dlc_A 124 W-------EDVATAFREIYRILKSGGKTYIGGGFGNK 153 (219)
T ss_dssp C-------SCHHHHHHHHHHHEEEEEEEEEEECCSSH
T ss_pred c-------cCHHHHHHHHHHhCCCCCEEEEEeccCcH
Confidence 9 88999999999999999999998755443
No 33
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.74 E-value=2.2e-17 Score=133.48 Aligned_cols=104 Identities=18% Similarity=0.358 Sum_probs=94.0
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhhh
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 128 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~ 128 (252)
++.+|||+|||+|.++..+++.+..+++++|+|+.+++.++++... .+++++++|+.+.+ +++++||+|++..+++|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD-TGITYERADLDKLH-LPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS-SSEEEEECCGGGCC-CCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc-CCceEEEcChhhcc-CCCCCceEEEEecccccc
Confidence 6679999999999999999998755899999999999999998754 36899999999887 777899999999999999
Q ss_pred cCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 129 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 129 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
.++..++++++++|+|||.+++....
T Consensus 121 -------~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 121 -------EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp -------SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -------chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 78899999999999999999998754
No 34
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.74 E-value=3.1e-17 Score=131.27 Aligned_cols=121 Identities=28% Similarity=0.483 Sum_probs=102.6
Q ss_pred chhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCCeEEEccccCCCCCCCC
Q 025475 36 YSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDE 114 (252)
Q Consensus 36 ~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~ 114 (252)
...+...+...++++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++.... .+++++++|+.+.+ ++++
T Consensus 25 ~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~ 102 (227)
T 1ve3_A 25 IETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-FEDK 102 (227)
T ss_dssp HHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-SCTT
T ss_pred HHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC-CCCC
Confidence 3445666777777788999999999999999999876 9999999999999999987533 57999999999877 6778
Q ss_pred CeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 115 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
+||+|+++.++++. +..+...++++++++|+|||.+++.+...+
T Consensus 103 ~~D~v~~~~~~~~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 146 (227)
T 1ve3_A 103 TFDYVIFIDSIVHF-----EPLELNQVFKEVRRVLKPSGKFIMYFTDLR 146 (227)
T ss_dssp CEEEEEEESCGGGC-----CHHHHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred cEEEEEEcCchHhC-----CHHHHHHHHHHHHHHcCCCcEEEEEecChH
Confidence 99999999995444 338889999999999999999999886543
No 35
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.74 E-value=1.7e-17 Score=131.47 Aligned_cols=110 Identities=22% Similarity=0.369 Sum_probs=96.7
Q ss_pred HHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEE
Q 025475 40 RPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAV 119 (252)
Q Consensus 40 ~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v 119 (252)
..++....+++.+|||+|||+|.++..+ +..+++++|+|+.+++.++++. ++++++++|+.+++ +++++||+|
T Consensus 27 ~~~l~~~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~~~~~fD~v 99 (211)
T 2gs9_A 27 ERALKGLLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA---PEATWVRAWGEALP-FPGESFDVV 99 (211)
T ss_dssp HHHHHTTCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC---TTSEEECCCTTSCC-SCSSCEEEE
T ss_pred HHHHHHhcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC---CCcEEEEcccccCC-CCCCcEEEE
Confidence 4456666667889999999999999887 4448999999999999999987 57899999999887 778899999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
++..+++|+ .++.++++++.++|+|||.+++.++...
T Consensus 100 ~~~~~l~~~-------~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 100 LLFTTLEFV-------EDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp EEESCTTTC-------SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEcChhhhc-------CCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 999999999 7889999999999999999999987654
No 36
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.74 E-value=2.9e-17 Score=130.86 Aligned_cols=106 Identities=16% Similarity=0.298 Sum_probs=91.6
Q ss_pred CCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCC-------CCeEEEccccCCCCCCCCCeeEEE
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIP-------QLKYLQMDVRDMSFFEDESFDAVI 120 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~-------~v~~~~~d~~~~~~~~~~~~D~v~ 120 (252)
++.+|||+|||+|.++..+++.+ ..+++++|+|+.+++.+++++...+ +++++++|+...+ ...++||+|+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~ 107 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD-KRFHGYDAAT 107 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC-GGGCSCSEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc-ccCCCcCEEe
Confidence 56799999999999999999985 4699999999999999999875322 7999999997665 5667899999
Q ss_pred eccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 121 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+..+++|+ ++++...+++++.++|+|||.+++...
T Consensus 108 ~~~~l~~~-----~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 108 VIEVIEHL-----DLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EESCGGGC-----CHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eHHHHHcC-----CHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 99999999 666779999999999999997766553
No 37
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.74 E-value=2.3e-17 Score=133.50 Aligned_cols=108 Identities=19% Similarity=0.348 Sum_probs=96.1
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
+.++.+|||+|||+|.++..+++.+. +++++|+++.+++.+++++.. .++++++++|+.+++ +++++||+|++..+
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FPDDSFDIITCRYA 96 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SCTTCEEEEEEESC
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-CCCCcEEEEEECCc
Confidence 45778999999999999999998864 999999999999999988743 347999999999887 77889999999999
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
++|+ .++..++++++++|+|||.+++.+...+
T Consensus 97 l~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 97 AHHF-------SDVRKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp GGGC-------SCHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred hhhc-------cCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 9999 7889999999999999999999876543
No 38
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.74 E-value=2.7e-17 Score=134.21 Aligned_cols=105 Identities=17% Similarity=0.315 Sum_probs=92.9
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
++++.+|||+|||+|.++..+++.+..+++++|+|+.+++.+++++... ++++++++|+.+++ +++++||+|++..
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP-FQNEELDLIWSEG 122 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS-SCTTCEEEEEEES
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-CCCCCEEEEEecC
Confidence 4567799999999999999999986459999999999999999987542 24999999998887 7788999999999
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+++|+ ++..+++++.++|+|||.+++.+.
T Consensus 123 ~l~~~--------~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 123 AIYNI--------GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp CSCCC--------CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hHhhc--------CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 99997 367899999999999999999874
No 39
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.73 E-value=1.7e-17 Score=138.68 Aligned_cols=117 Identities=20% Similarity=0.388 Sum_probs=98.1
Q ss_pred HHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-----CCCeEEEccccCCCCCCCCC
Q 025475 41 PFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-----PQLKYLQMDVRDMSFFEDES 115 (252)
Q Consensus 41 ~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~~ 115 (252)
.++.....++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++++... .+++++++|+.+++ + +++
T Consensus 74 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~-~-~~~ 150 (299)
T 3g2m_A 74 EFATRTGPVSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA-L-DKR 150 (299)
T ss_dssp HHHHHHCCCCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC-C-SCC
T ss_pred HHHHhhCCCCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC-c-CCC
Confidence 33333334455999999999999999999865 8999999999999999998653 47999999999987 4 678
Q ss_pred eeEEEec-cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhh
Q 025475 116 FDAVIDK-GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKA 165 (252)
Q Consensus 116 ~D~v~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~ 165 (252)
||+|++. .+++++ ++++...++++++++|+|||.+++..+..+..
T Consensus 151 fD~v~~~~~~~~~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 151 FGTVVISSGSINEL-----DEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp EEEEEECHHHHTTS-----CHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred cCEEEECCcccccC-----CHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 9999865 667777 66788999999999999999999998876654
No 40
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.73 E-value=1.5e-17 Score=137.28 Aligned_cols=116 Identities=29% Similarity=0.497 Sum_probs=100.3
Q ss_pred hhhHHHHHhh--CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCC
Q 025475 37 SALRPFVRKY--IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFF 111 (252)
Q Consensus 37 ~~l~~~~~~~--~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~ 111 (252)
..+..++... ++++.+|||+|||+|.++..+++.+ ..+++++|+++.+++.+++++.. .++++++++|+.+.+ +
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~ 101 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP-F 101 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC-S
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC-C
Confidence 4455555554 3577899999999999999999885 45999999999999999998753 347999999999987 7
Q ss_pred CCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 112 EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 112 ~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
++++||+|++..+++|+ .++..+++++.++|+|||.+++.+.
T Consensus 102 ~~~~fD~v~~~~~l~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 102 EDSSFDHIFVCFVLEHL-------QSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp CTTCEEEEEEESCGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCeeEEEEechhhhc-------CCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 78899999999999999 7788999999999999999999874
No 41
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.73 E-value=2.7e-17 Score=133.03 Aligned_cols=116 Identities=14% Similarity=0.203 Sum_probs=97.7
Q ss_pred hHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCCCCCCCee
Q 025475 39 LRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFEDESFD 117 (252)
Q Consensus 39 l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~~~D 117 (252)
+...+....+++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++....+ +++++++|+.+.+ ++ ++||
T Consensus 27 ~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~-~~fD 103 (246)
T 1y8c_A 27 IIEKCVENNLVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-IN-RKFD 103 (246)
T ss_dssp HHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-CS-CCEE
T ss_pred HHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCC-cc-CCce
Confidence 3444444444677999999999999999999865 89999999999999999875433 7899999999887 55 7899
Q ss_pred EEEecc-chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 118 AVIDKG-TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 118 ~v~~~~-~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+|++.. +++|+ +++++...++++++++|+|||.+++....
T Consensus 104 ~v~~~~~~l~~~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 104 LITCCLDSTNYI----IDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp EEEECTTGGGGC----CSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EEEEcCcccccc----CCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 999998 99998 45578899999999999999999986654
No 42
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.73 E-value=3.7e-17 Score=135.23 Aligned_cols=102 Identities=23% Similarity=0.486 Sum_probs=91.9
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
.++.+|||+|||+|.++..+++.+ .+++|+|+|+.|++.++++. ++++++++|+.+++ + +++||+|++..+++|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~-~~~fD~v~~~~~l~~ 129 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSG-AEVLGTDNAATMIEKARQNY---PHLHFDVADARNFR-V-DKPLDAVFSNAMLHW 129 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHC---TTSCEEECCTTTCC-C-SSCEEEEEEESCGGG
T ss_pred CCCCEEEEecCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHhhC---CCCEEEECChhhCC-c-CCCcCEEEEcchhhh
Confidence 467799999999999999999965 49999999999999999886 57899999999987 4 578999999999999
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+ .++..++++++++|+|||.+++..+..
T Consensus 130 ~-------~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 130 V-------KEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp C-------SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred C-------cCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 9 788999999999999999999987654
No 43
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.73 E-value=3e-17 Score=134.25 Aligned_cols=104 Identities=21% Similarity=0.319 Sum_probs=93.5
Q ss_pred hCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 46 YIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
.+.++.+|||+|||+|.++..+++.+ .+++++|+|+.+++.+++++.. .++++++++|+.+++ +++++||+|++..+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP-LPDESVHGVIVVHL 113 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-SCTTCEEEEEEESC
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-CCCCCeeEEEECCc
Confidence 35677899999999999999999886 4899999999999999998732 357999999999887 77889999999999
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEE
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 158 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~ 158 (252)
+||+ .+...++++++++|+|||.+++.
T Consensus 114 l~~~-------~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 114 WHLV-------PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGGC-------TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhc-------CCHHHHHHHHHHHCCCCcEEEEE
Confidence 9999 78899999999999999999887
No 44
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.73 E-value=1.6e-17 Score=135.50 Aligned_cols=105 Identities=22% Similarity=0.243 Sum_probs=92.8
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
++++.+|||+|||+|..+..+++....+++++|+|+.+++.++++.... ++++++++|+.+.+ + +++||+|++..
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~-~~~fD~V~~~~ 111 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV-A-NEKCDVAACVG 111 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-C-SSCEEEEEEES
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC-c-CCCCCEEEECC
Confidence 4577799999999999999999874348999999999999999987532 37999999999987 5 78899999999
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+++|+ .++..++++++++|||||.+++.+.
T Consensus 112 ~~~~~-------~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 112 ATWIA-------GGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp CGGGT-------SSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred ChHhc-------CCHHHHHHHHHHHcCCCeEEEEecC
Confidence 99999 7889999999999999999999764
No 45
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.73 E-value=2e-17 Score=130.79 Aligned_cols=111 Identities=27% Similarity=0.393 Sum_probs=95.0
Q ss_pred CCCCCcEEEEcccCcHhH-HHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 47 IPTSSRVLMVGCGNALMS-EDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~-~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
.+++.+|||+|||+|..+ ..++..+. +++++|+|+.+++.++++... ..+++++++|+.+.+ +++++||+|++..+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP-FKDESMSFVYSYGT 98 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC-SCTTCEEEEEECSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC-CCCCceeEEEEcCh
Confidence 456789999999999974 45555554 899999999999999988743 247899999999887 77789999999999
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
++|+ +.+++..++++++++|+|||.+++.++..+.
T Consensus 99 l~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 99 IFHM-----RKNDVKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp GGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred HHhC-----CHHHHHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 9998 7789999999999999999999998876544
No 46
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.73 E-value=3.4e-17 Score=130.55 Aligned_cols=106 Identities=15% Similarity=0.241 Sum_probs=91.0
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCC-------CCeEEEccccCCCCCCCCCeeEE
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIP-------QLKYLQMDVRDMSFFEDESFDAV 119 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~-------~v~~~~~d~~~~~~~~~~~~D~v 119 (252)
.++.+|||+|||+|.++..+++.+ ..+++++|+|+.+++.+++++.... +++++++|+...+ ...++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V 106 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD-KRFSGYDAA 106 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC-GGGTTCSEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc-cccCCCCEE
Confidence 356799999999999999999885 3699999999999999999875322 7899999997766 666889999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
++..+++|+ ++++..++++++.++|+|||.++...
T Consensus 107 ~~~~~l~~~-----~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 107 TVIEVIEHL-----DENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EEESCGGGC-----CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEHHHHHhC-----CHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 999999999 65677899999999999999666544
No 47
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.73 E-value=2.6e-17 Score=135.49 Aligned_cols=106 Identities=26% Similarity=0.437 Sum_probs=94.3
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
.++.+|||+|||+|.++..+++....+++++|+|+.+++.++++.... ++++++++|+.+++ +++++||+|++..+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-FEDASFDAVWALES 138 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-SCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-CCCCCccEEEEech
Confidence 467799999999999999998864459999999999999999987532 36999999999987 77889999999999
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
++|+ .+...+++++.++|+|||.+++.++.
T Consensus 139 l~~~-------~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 139 LHHM-------PDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp TTTS-------SCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hhhC-------CCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 9999 77899999999999999999998754
No 48
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.73 E-value=8.4e-17 Score=133.51 Aligned_cols=104 Identities=17% Similarity=0.311 Sum_probs=93.6
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
++.+|||+|||+|.++..+++.+. +++++|+|+.+++.+++++...+ +++++++|+.+.+ . +++||+|+++.+++|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAAN-I-QENYDFIVSTVVFMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCC-C-CSCEEEEEECSSGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccccc-c-cCCccEEEEccchhh
Confidence 677999999999999999999976 99999999999999999886433 7999999999987 4 778999999999999
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+ +++....+++++.++|+|||.+++...
T Consensus 197 ~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 197 L-----NRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp S-----CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred C-----CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9 778889999999999999999777653
No 49
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.73 E-value=4.4e-17 Score=133.46 Aligned_cols=114 Identities=22% Similarity=0.401 Sum_probs=96.4
Q ss_pred hhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCe
Q 025475 37 SALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESF 116 (252)
Q Consensus 37 ~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 116 (252)
..+..++...++++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++... .++++|+.+++ +++++|
T Consensus 42 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~----~~~~~d~~~~~-~~~~~f 115 (260)
T 2avn_A 42 RLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVK----NVVEAKAEDLP-FPSGAF 115 (260)
T ss_dssp HHHHHHHHHHCCSCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCS----CEEECCTTSCC-SCTTCE
T ss_pred HHHHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCC----CEEECcHHHCC-CCCCCE
Confidence 345666777777788999999999999999999865 899999999999999998752 38899999887 778899
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
|+|++..+++|+ . .++..+++++.++|+|||.+++..++.
T Consensus 116 D~v~~~~~~~~~-----~-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 116 EAVLALGDVLSY-----V-ENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp EEEEECSSHHHH-----C-SCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred EEEEEcchhhhc-----c-ccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 999998876665 2 348999999999999999999987653
No 50
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.72 E-value=2.1e-17 Score=133.72 Aligned_cols=104 Identities=20% Similarity=0.306 Sum_probs=92.3
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCC--CCCCCCCeeEEEeccc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM--SFFEDESFDAVIDKGT 124 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~--~~~~~~~~D~v~~~~~ 124 (252)
++++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++ ++++++|+.+. + +++++||+|++..+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~------~~~~~~d~~~~~~~-~~~~~fD~i~~~~~ 110 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK------FNVVKSDAIEYLKS-LPDKYLDGVMISHF 110 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT------SEEECSCHHHHHHT-SCTTCBSEEEEESC
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh------cceeeccHHHHhhh-cCCCCeeEEEECCc
Confidence 45778999999999999999999865 899999999999999876 68899998875 4 67889999999999
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
++|+ +.++...++++++++|+|||.+++..+...
T Consensus 111 l~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 111 VEHL-----DPERLFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp GGGS-----CGGGHHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred hhhC-----CcHHHHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 9999 566889999999999999999999886643
No 51
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.72 E-value=4.7e-17 Score=131.18 Aligned_cols=137 Identities=23% Similarity=0.382 Sum_probs=107.9
Q ss_pred hhhHHHHhccCCCceeeeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC
Q 025475 16 ALYWNARYVQEGGSFDWYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI 95 (252)
Q Consensus 16 ~~~w~~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~ 95 (252)
.++|+..+..... .|......+...+....+++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++.
T Consensus 9 a~~yd~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~--- 82 (239)
T 3bxo_A 9 ADVYDLFYLGRGK--DYAAEASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL--- 82 (239)
T ss_dssp HHHHHHHHHHHTC--CHHHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC---
T ss_pred HHHHHHHhhccHh--hHHHHHHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC---
Confidence 4577776653211 222223345566666667788999999999999999998865 8999999999999999886
Q ss_pred CCCeEEEccccCCCCCCCCCeeEEEe-ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 96 PQLKYLQMDVRDMSFFEDESFDAVID-KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 96 ~~v~~~~~d~~~~~~~~~~~~D~v~~-~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
++++++++|+.+.+ . .++||+|++ ..+++|+ +++++...++++++++|+|||.+++.++..+.
T Consensus 83 ~~~~~~~~d~~~~~-~-~~~~D~v~~~~~~~~~~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (239)
T 3bxo_A 83 PDATLHQGDMRDFR-L-GRKFSAVVSMFSSVGYL----KTTEELGAAVASFAEHLEPGGVVVVEPWWFPE 146 (239)
T ss_dssp TTCEEEECCTTTCC-C-SSCEEEEEECTTGGGGC----CSHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred CCCEEEECCHHHcc-c-CCCCcEEEEcCchHhhc----CCHHHHHHHHHHHHHhcCCCeEEEEEeccCcc
Confidence 46899999999887 4 678999995 4588887 34578899999999999999999998765543
No 52
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.72 E-value=2.5e-17 Score=137.60 Aligned_cols=115 Identities=16% Similarity=0.282 Sum_probs=96.8
Q ss_pred hhHHHHHhhC-CCCCcEEEEcccCcHhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcC----CCCCeEEEccccCCCC
Q 025475 38 ALRPFVRKYI-PTSSRVLMVGCGNALMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEE----IPQLKYLQMDVRDMSF 110 (252)
Q Consensus 38 ~l~~~~~~~~-~~~~~vLD~G~G~G~~~~~l~~~--~~~~v~~vD~s~~~i~~a~~~~~~----~~~v~~~~~d~~~~~~ 110 (252)
.+.+.+.... .++.+|||+|||+|.++..+++. ...+++|+|+|+.+++.+++++.. .++++++++|+.+++
T Consensus 24 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~- 102 (299)
T 3g5t_A 24 DFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK- 102 (299)
T ss_dssp HHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG-
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC-
Confidence 4555565553 46779999999999999999963 356999999999999999998754 358999999999887
Q ss_pred CCC------CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 111 FED------ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 111 ~~~------~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+.. ++||+|++..++||+ ++..+++++.++|+|||.+++.++.
T Consensus 103 ~~~~~~~~~~~fD~V~~~~~l~~~--------~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 103 FLGADSVDKQKIDMITAVECAHWF--------DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp GGCTTTTTSSCEEEEEEESCGGGS--------CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ccccccccCCCeeEEeHhhHHHHh--------CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 555 799999999999987 5788999999999999999986644
No 53
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.72 E-value=5.6e-17 Score=135.01 Aligned_cols=115 Identities=18% Similarity=0.318 Sum_probs=98.0
Q ss_pred HhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCC-CCCCeeEE
Q 025475 44 RKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFF-EDESFDAV 119 (252)
Q Consensus 44 ~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~-~~~~~D~v 119 (252)
...++++.+|||+|||+|.++..++..+..+++++|+|+.+++.+++++... .+++++++|+.+.+ + .+++||+|
T Consensus 59 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~fD~v 137 (298)
T 1ri5_A 59 RLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH-MDLGKEFDVI 137 (298)
T ss_dssp HHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC-CCCSSCEEEE
T ss_pred HHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccc-cCCCCCcCEE
Confidence 3446788899999999999999998887669999999999999999988653 25899999999887 5 57889999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
++..++||+ ..+..+...+++++.++|+|||.+++..+..
T Consensus 138 ~~~~~l~~~---~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 138 SSQFSFHYA---FSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp EEESCGGGG---GSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EECchhhhh---cCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 999999882 0144889999999999999999999988664
No 54
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=1.5e-17 Score=136.34 Aligned_cols=111 Identities=17% Similarity=0.298 Sum_probs=95.7
Q ss_pred hhHHHHHhhC--CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCC
Q 025475 38 ALRPFVRKYI--PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDES 115 (252)
Q Consensus 38 ~l~~~~~~~~--~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~ 115 (252)
.+.+.+...+ .++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++.+. +++++++|+.+++ +++++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~----~~~~~~~d~~~~~-~~~~~ 94 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVHP----QVEWFTGYAENLA-LPDKS 94 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCCT----TEEEECCCTTSCC-SCTTC
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcc----CCEEEECchhhCC-CCCCC
Confidence 3444444443 5677999999999999999998754 9999999999998876654 7899999999987 78889
Q ss_pred eeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 116 FDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 116 ~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
||+|++..+++|+ .++..++++++++|| ||.+++.++..
T Consensus 95 fD~v~~~~~l~~~-------~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 95 VDGVISILAIHHF-------SHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp BSEEEEESCGGGC-------SSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred EeEEEEcchHhhc-------cCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 9999999999999 899999999999999 99988888654
No 55
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.71 E-value=1.2e-16 Score=130.48 Aligned_cols=103 Identities=17% Similarity=0.219 Sum_probs=85.9
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC----CCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----FEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~----~~~~~~D~v~~~ 122 (252)
+.++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.++++.... +++.++.+.+. ..+++||+|+++
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~~~~~~fD~Vv~~ 117 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIPKELAGHFDFVLND 117 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCGGGTTCCSEEEEE
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc----cceeeeeecccccccccCCCccEEEEh
Confidence 45677999999999999999999875 8999999999999999998543 34455544431 125689999999
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
.+++|+ ..++...+++++.++| |||.++++..
T Consensus 118 ~~l~~~-----~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 118 RLINRF-----TTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp SCGGGS-----CHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred hhhHhC-----CHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 999998 7788899999999999 9999998764
No 56
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.71 E-value=6e-17 Score=125.74 Aligned_cols=121 Identities=15% Similarity=0.177 Sum_probs=92.2
Q ss_pred HHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCee
Q 025475 40 RPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFD 117 (252)
Q Consensus 40 ~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D 117 (252)
..++...++++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++++.. .+++++++.+..++..+.+++||
T Consensus 13 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD 91 (185)
T 3mti_A 13 HDFLAEVLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIR 91 (185)
T ss_dssp HHHHHTTCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEE
T ss_pred HHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcC
Confidence 4456666788899999999999999999998 45999999999999999998853 35789999888776434567899
Q ss_pred EEEeccc-hhhhcC-CCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 118 AVIDKGT-LDSLMC-GTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 118 ~v~~~~~-l~~~~~-~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+|+++.. +++... -...+.....+++++.++|+|||.+++..+.
T Consensus 92 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 92 AAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred EEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 9998732 221000 0012356778899999999999999998764
No 57
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=2.3e-16 Score=128.77 Aligned_cols=103 Identities=14% Similarity=0.199 Sum_probs=91.7
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
.++.+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++. ++++++++|+.+++ ++++||+|+++.+++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~ 106 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---PNTNFGKADLATWK--PAQKADLLYANAVFQ 106 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---TTSEEEECCTTTCC--CSSCEEEEEEESCGG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---CCcEEEECChhhcC--ccCCcCEEEEeCchh
Confidence 466799999999999999999872 348999999999999999883 57899999999876 567899999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
|+ .++..++++++++|+|||.+++.++..
T Consensus 107 ~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 107 WV-------PDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp GS-------TTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred hC-------CCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 99 889999999999999999999988643
No 58
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.70 E-value=4.1e-17 Score=135.78 Aligned_cols=112 Identities=19% Similarity=0.298 Sum_probs=90.5
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC------CCCCeEEEccccCCCC--CCCCCeeEEE
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDMSF--FEDESFDAVI 120 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~------~~~v~~~~~d~~~~~~--~~~~~~D~v~ 120 (252)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++... ..++.+..+|+.+++. +++++||+|+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~ 135 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVI 135 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEE
Confidence 567999999999999999999976 999999999999999887521 1367889999877531 3567899999
Q ss_pred ec-cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 121 DK-GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 121 ~~-~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+. .+++|+.-...+.+++.+++++++++|+|||.+++...+
T Consensus 136 ~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 136 CLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp ECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 98 899999000001255999999999999999999998765
No 59
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.70 E-value=1e-16 Score=133.00 Aligned_cols=106 Identities=16% Similarity=0.291 Sum_probs=94.3
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
+.++.+|||+|||+|.++..+++.. ..+++++|+|+.+++.+++++...+ +++++++|+.+++ + +++||+|++..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-~-~~~fD~v~~~~ 97 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-L-NDKYDIAICHA 97 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-C-SSCEEEEEEES
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC-c-CCCeeEEEECC
Confidence 3567799999999999999999872 3589999999999999999986544 7999999999987 4 46899999999
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+++|+ .+...++++++++|+|||.+++.++.
T Consensus 98 ~l~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 98 FLLHM-------TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CGGGC-------SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhhcC-------CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 99999 78899999999999999999998865
No 60
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.70 E-value=8.8e-17 Score=135.16 Aligned_cols=104 Identities=19% Similarity=0.280 Sum_probs=93.0
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
.++.+|||+|||+|.++..+++. +. +++++|+++.+++.++++.... ++++++++|+.+++ +++++||+|++..
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP-FDKGAVTASWNNE 193 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-CCTTCEEEEEEES
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-CCCCCEeEEEECC
Confidence 46779999999999999999987 54 8999999999999999987543 37999999999987 7788999999999
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+++|+ . +..+++++.++|+|||.+++.++.
T Consensus 194 ~l~~~-------~-~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 194 STMYV-------D-LHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp CGGGS-------C-HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred chhhC-------C-HHHHHHHHHHHcCCCcEEEEEEcc
Confidence 99998 3 899999999999999999998753
No 61
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.70 E-value=4.3e-17 Score=124.78 Aligned_cols=101 Identities=21% Similarity=0.354 Sum_probs=90.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
..++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++ .+++++.++| .+ +++++||+|++..+++
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---~~~v~~~~~d---~~-~~~~~~D~v~~~~~l~ 86 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK---FDSVITLSDP---KE-IPDNSVDFILFANSFH 86 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH---CTTSEEESSG---GG-SCTTCEEEEEEESCST
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh---CCCcEEEeCC---CC-CCCCceEEEEEccchh
Confidence 45677999999999999999999865 999999999999999998 3578999999 44 6678999999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
|+ .++..+++++.++|+|||.+++.++..
T Consensus 87 ~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 87 DM-------DDKQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp TC-------SCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cc-------cCHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 99 788999999999999999999988654
No 62
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.70 E-value=6.6e-17 Score=134.42 Aligned_cols=109 Identities=22% Similarity=0.293 Sum_probs=82.7
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC-------------------------------
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP------------------------------- 96 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~------------------------------- 96 (252)
.++.+|||+|||+|.....++..+..+|+|+|+|+.|++.|+++++..+
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 3567999999999995554444334499999999999999988654211
Q ss_pred -CCeEEEccccC-CC----CCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 97 -QLKYLQMDVRD-MS----FFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 97 -~v~~~~~d~~~-~~----~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.++++++|+.+ .+ .+++++||+|+++.+++|+ .++.+++.+++++++++|||||.+++..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~---~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAV---SPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHH---CSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhh---cCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 13566778887 33 1334679999999999994 1112689999999999999999999975
No 63
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.70 E-value=9.1e-17 Score=134.64 Aligned_cols=117 Identities=17% Similarity=0.161 Sum_probs=97.2
Q ss_pred HHHHhhCCCCCcEEEEcccCcHhHHHHH--HcCCCcEEEEeCCHHHHHHHHHhhcCCC---CCeEEEccccCCCCCCCCC
Q 025475 41 PFVRKYIPTSSRVLMVGCGNALMSEDMV--KDGYEDIVNIDISSVAIDMMKMKYEEIP---QLKYLQMDVRDMSFFEDES 115 (252)
Q Consensus 41 ~~~~~~~~~~~~vLD~G~G~G~~~~~l~--~~~~~~v~~vD~s~~~i~~a~~~~~~~~---~v~~~~~d~~~~~~~~~~~ 115 (252)
..+...++++.+|||+|||+|..+..++ .....+++++|+|+.+++.+++++...+ +++++++|+.+.+ ++ ++
T Consensus 110 ~~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~-~~ 187 (305)
T 3ocj_A 110 RALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD-TR-EG 187 (305)
T ss_dssp HHHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC-CC-SC
T ss_pred HHHHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC-cc-CC
Confidence 4445557888899999999999999985 3335599999999999999999986532 4899999999987 55 89
Q ss_pred eeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 116 FDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 116 ~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
||+|+++.+++|+ +++.....++++++++|+|||.+++.++..+
T Consensus 188 fD~v~~~~~~~~~----~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 188 YDLLTSNGLNIYE----PDDARVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp EEEEECCSSGGGC----CCHHHHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred eEEEEECChhhhc----CCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 9999999999998 3344445689999999999999999886654
No 64
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.70 E-value=3.9e-17 Score=136.66 Aligned_cols=110 Identities=19% Similarity=0.279 Sum_probs=85.6
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC--------CCeEEEcccc------CCC-CCCC
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP--------QLKYLQMDVR------DMS-FFED 113 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~--------~v~~~~~d~~------~~~-~~~~ 113 (252)
++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++....+ ++++.+.|+. +++ .+++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 467999999999987776666655589999999999999999875322 1467788772 221 1456
Q ss_pred CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 114 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
++||+|+|..++||++ +.++..+++++++++|||||++++.+++.
T Consensus 128 ~~FD~V~~~~~lhy~~----~~~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSF----HPRHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp SCEEEEEEESCGGGTC----STTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCeeEEEECchHHHhC----CHHHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 7999999999998751 22356899999999999999999988653
No 65
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.69 E-value=2.8e-16 Score=126.89 Aligned_cols=116 Identities=19% Similarity=0.357 Sum_probs=98.2
Q ss_pred hhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCCeEEEccccCCCCCCCCCe
Q 025475 38 ALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESF 116 (252)
Q Consensus 38 ~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~~ 116 (252)
...+.+...++++.+|||+|||+|.++..+++. .+++++|+|+.+++.++++.... .+++++++|+.+.+ .+ ++|
T Consensus 22 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~-~~f 97 (243)
T 3d2l_A 22 EWVAWVLEQVEPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE-LP-EPV 97 (243)
T ss_dssp HHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC-CS-SCE
T ss_pred HHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC-CC-CCc
Confidence 355566677788889999999999999999887 59999999999999999987532 47899999999886 44 789
Q ss_pred eEEEecc-chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 117 DAVIDKG-TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 117 D~v~~~~-~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
|+|++.. +++|+ .+.++...+++++.++|+|||.+++....
T Consensus 98 D~v~~~~~~~~~~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 98 DAITILCDSLNYL----QTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp EEEEECTTGGGGC----CSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CEEEEeCCchhhc----CCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 9999986 88887 45578889999999999999999886543
No 66
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.69 E-value=6.2e-17 Score=130.70 Aligned_cols=109 Identities=19% Similarity=0.243 Sum_probs=89.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCCeEEEccccCC--CCCCCCCeeEEEe-c
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDM--SFFEDESFDAVID-K 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~-~~v~~~~~d~~~~--~~~~~~~~D~v~~-~ 122 (252)
..++.+|||+|||+|.++..+++.+..+++++|+|+.|++.|+++.... .+++++++|+.+. + +++++||+|++ .
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~fD~V~~d~ 136 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPT-LPDGHFDGILYDT 136 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGG-SCTTCEEEEEECC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcc-cCCCceEEEEECC
Confidence 4567799999999999999998876558999999999999999988543 4689999999887 5 77889999999 4
Q ss_pred cch--hhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 123 GTL--DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 123 ~~l--~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
..+ +.. ...++..++++++++|||||++++.++.
T Consensus 137 ~~~~~~~~-----~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 137 YPLSEETW-----HTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCCBGGGT-----TTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred cccchhhh-----hhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 443 222 2356678899999999999999987643
No 67
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.69 E-value=3.3e-16 Score=127.37 Aligned_cols=135 Identities=22% Similarity=0.396 Sum_probs=100.5
Q ss_pred hhhHHHHhccCCCceeeeccchhhHHHHHhhC-CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC
Q 025475 16 ALYWNARYVQEGGSFDWYQRYSALRPFVRKYI-PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE 94 (252)
Q Consensus 16 ~~~w~~~y~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~ 94 (252)
.+||+..|...... +.....-+..++.... +++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++...
T Consensus 9 a~~yd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~ 85 (252)
T 1wzn_A 9 AEYYDTIYRRRIER--VKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKE 85 (252)
T ss_dssp GGGHHHHTHHHHHT--HHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcchhh--hHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHh
Confidence 56788766532110 0011122333444332 4567999999999999999999875 899999999999999998754
Q ss_pred C-CCCeEEEccccCCCCCCCCCeeEEEecc-chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 95 I-PQLKYLQMDVRDMSFFEDESFDAVIDKG-TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 95 ~-~~v~~~~~d~~~~~~~~~~~~D~v~~~~-~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
. .+++++++|+.+.+ .+ ++||+|++.. .++++ +.++...++++++++|+|||.+++...
T Consensus 86 ~~~~v~~~~~d~~~~~-~~-~~fD~v~~~~~~~~~~-----~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 86 RNLKIEFLQGDVLEIA-FK-NEFDAVTMFFSTIMYF-----DEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp TTCCCEEEESCGGGCC-CC-SCEEEEEECSSGGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCceEEEECChhhcc-cC-CCccEEEEcCCchhcC-----CHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 3 37999999999876 43 6899999874 45555 557889999999999999999987553
No 68
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.68 E-value=2.6e-16 Score=131.61 Aligned_cols=111 Identities=15% Similarity=0.274 Sum_probs=93.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCC---CCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIP---QLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~---~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
++++.+|||+|||+|.++..+++. + .+++++|+|+.+++.+++++...+ +++++++|+.++ +++||+|++.
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~fD~v~~~ 144 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----DEPVDRIVSL 144 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC----CCCCSEEEEE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc----CCCccEEEEc
Confidence 457779999999999999999988 6 589999999999999999985432 789999999765 5789999999
Q ss_pred cchhhhcCCCC----ChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 123 GTLDSLMCGTN----APISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 123 ~~l~~~~~~~~----~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
.+++|+ ..+ +.++...+++++.++|+|||.+++.++..+.
T Consensus 145 ~~~~~~--~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 145 GAFEHF--ADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp SCGGGT--TCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred chHHhc--CccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 999998 001 2256689999999999999999998876543
No 69
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.68 E-value=1.2e-16 Score=138.10 Aligned_cols=106 Identities=18% Similarity=0.268 Sum_probs=93.2
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcC----------CCCCeEEEccccCC------C
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEE----------IPQLKYLQMDVRDM------S 109 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~--~~~~v~~vD~s~~~i~~a~~~~~~----------~~~v~~~~~d~~~~------~ 109 (252)
.++.+|||+|||+|.++..+++. ...+|+++|+|+.+++.+++++.. .++++++++|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46779999999999999999886 245999999999999999998642 15899999999986 5
Q ss_pred CCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 110 FFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 110 ~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+++++||+|+++.+++|+ .++..++++++++|||||.+++.++.
T Consensus 162 -~~~~~fD~V~~~~~l~~~-------~d~~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 162 -VPDSSVDIVISNCVCNLS-------TNKLALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp -CCTTCEEEEEEESCGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -CCCCCEEEEEEccchhcC-------CCHHHHHHHHHHHcCCCCEEEEEEec
Confidence 778899999999999999 78899999999999999999998743
No 70
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.68 E-value=1.4e-16 Score=132.79 Aligned_cols=111 Identities=18% Similarity=0.228 Sum_probs=88.6
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC-------------------------------
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI------------------------------- 95 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~------------------------------- 95 (252)
.++.+|||+|||+|.++..++.. +..+|+|+|+++.+++.|++++...
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 35679999999999999999987 3559999999999999999986421
Q ss_pred -----------------------------CCCeEEEccccCCC----CCCCCCeeEEEeccchhhhcCCCCChhhHHHHH
Q 025475 96 -----------------------------PQLKYLQMDVRDMS----FFEDESFDAVIDKGTLDSLMCGTNAPISASQML 142 (252)
Q Consensus 96 -----------------------------~~v~~~~~d~~~~~----~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l 142 (252)
.+++++++|+.... .+..++||+|++..+++|+ +-..+++.+.+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~i-hl~~~~~~~~~~l 203 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWV-HLNWGDEGLKRMF 203 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHH-HHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHh-hhcCCHHHHHHHH
Confidence 37899999987543 1356789999999999776 0000123889999
Q ss_pred HHHHHcccCCcEEEEEE
Q 025475 143 GEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 143 ~~~~~~L~~gG~l~i~~ 159 (252)
++++++|+|||+|++..
T Consensus 204 ~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHHHhCCCcEEEEec
Confidence 99999999999998864
No 71
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.68 E-value=3.7e-16 Score=129.62 Aligned_cols=107 Identities=17% Similarity=0.278 Sum_probs=92.9
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
++++.+|||+|||+|.++..+++. +. +++++|+|+.+++.+++++... ++++++++|+.+++ ++||+|++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~fD~v~~~ 136 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD----EPVDRIVSI 136 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC----CCCSEEEEE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC----CCeeEEEEe
Confidence 356779999999999999999854 55 9999999999999999987542 37899999997653 689999999
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
.+++|+ +++++..++++++++|+|||.+++.++..+
T Consensus 137 ~~l~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 137 GAFEHF-----GHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp SCGGGT-----CTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred Cchhhc-----ChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 999999 667899999999999999999999886543
No 72
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.68 E-value=2.5e-16 Score=122.80 Aligned_cols=108 Identities=10% Similarity=0.120 Sum_probs=91.1
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCC-CCCCCeeEEEeccc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSF-FEDESFDAVIDKGT 124 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~-~~~~~~D~v~~~~~ 124 (252)
.++.+|||+|||+|.++..++..+..+++++|+|+.+++.+++++.. .++++++++|+.+... +++++||+|+++.+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 46779999999999999988888776899999999999999998854 2479999999987641 34678999999988
Q ss_pred hhhhcCCCCChhhHHHHHHHHHH--cccCCcEEEEEEcC
Q 025475 125 LDSLMCGTNAPISASQMLGEVSR--LLKPGGIYMLITYG 161 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~--~L~~gG~l~i~~~~ 161 (252)
+++. .++..+++..+.+ +|+|||.+++....
T Consensus 123 ~~~~------~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 123 YNVD------SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp TTSC------HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCcc------hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 7762 2678899999999 99999999997744
No 73
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.67 E-value=2.1e-16 Score=126.13 Aligned_cols=103 Identities=18% Similarity=0.281 Sum_probs=88.2
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCC---CCCCCCCeeEEEeccch
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM---SFFEDESFDAVIDKGTL 125 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~---~~~~~~~~D~v~~~~~l 125 (252)
++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++ .++.+.+.|+.++ +.....+||+|++..++
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l 126 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA----GAGEVHLASYAQLAEAKVPVGKDYDLICANFAL 126 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT----CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh----cccccchhhHHhhcccccccCCCccEEEECchh
Confidence 457999999999999999999865 899999999999999988 4678888888776 31334569999999998
Q ss_pred hhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 126 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
+ . .++..++++++++|+|||.+++.++....
T Consensus 127 ~-~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 127 L-H-------QDIIELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp C-S-------SCCHHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred h-h-------hhHHHHHHHHHHHhCCCeEEEEEecCccc
Confidence 8 6 67889999999999999999999876533
No 74
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.67 E-value=1.3e-16 Score=128.85 Aligned_cols=106 Identities=19% Similarity=0.213 Sum_probs=87.8
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCC-CCCCCCeeEEEec--
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMS-FFEDESFDAVIDK-- 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~-~~~~~~~D~v~~~-- 122 (252)
.+++.+|||||||+|..+..+++....++++||+|+.+++.|+++....+ +++++.+|..+.. .+++++||.|+..
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 45677999999999999999988765589999999999999999986543 6888888876642 2677889999853
Q ss_pred ---cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 123 ---GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 123 ---~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
..++|+ .++..++++++|+|||||++++.+
T Consensus 138 ~~~~~~~~~-------~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 138 PLSEETWHT-------HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCBGGGTTT-------HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ecccchhhh-------cchhhhhhhhhheeCCCCEEEEEe
Confidence 345556 889999999999999999997644
No 75
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.67 E-value=4e-16 Score=124.46 Aligned_cols=104 Identities=19% Similarity=0.298 Sum_probs=90.7
Q ss_pred HHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEE
Q 025475 40 RPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAV 119 (252)
Q Consensus 40 ~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v 119 (252)
...+....+ +.+|||+|||+|.++..++.. +++|+++.+++.++.+ +++++++|+.+.+ +++++||+|
T Consensus 39 ~~~l~~~~~-~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-----~~~~~~~d~~~~~-~~~~~fD~v 106 (219)
T 1vlm_A 39 LQAVKCLLP-EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-----GVFVLKGTAENLP-LKDESFDFA 106 (219)
T ss_dssp HHHHHHHCC-SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-----TCEEEECBTTBCC-SCTTCEEEE
T ss_pred HHHHHHhCC-CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-----CCEEEEcccccCC-CCCCCeeEE
Confidence 345555555 779999999999999988653 9999999999999987 5799999998887 777899999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
++..+++|+ .++..+++++.++|+|||.+++.....
T Consensus 107 ~~~~~l~~~-------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 107 LMVTTICFV-------DDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp EEESCGGGS-------SCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred EEcchHhhc-------cCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 999999999 788999999999999999999988654
No 76
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.67 E-value=6.6e-16 Score=130.04 Aligned_cols=108 Identities=11% Similarity=0.198 Sum_probs=94.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
+.++.+|||+|||+|.++..+++. +. +++++|+|+.+++.++++.... ++++++++|+.+++ ++||+|++.
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~fD~v~~~ 162 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA----EPVDRIVSI 162 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC----CCCSEEEEE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC----CCcCEEEEe
Confidence 346779999999999999999987 65 9999999999999999987543 36899999987764 689999999
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
.+++|+ +.+++..+++++.++|+|||.+++.++..+.
T Consensus 163 ~~l~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 163 EAFEHF-----GHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp SCGGGT-----CGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred ChHHhc-----CHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 999999 7788999999999999999999998876443
No 77
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.66 E-value=8.9e-16 Score=123.20 Aligned_cols=121 Identities=14% Similarity=0.171 Sum_probs=93.9
Q ss_pred HHhhCCCCCcEEEEccc-CcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCCCCCCCeeEEE
Q 025475 43 VRKYIPTSSRVLMVGCG-NALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFEDESFDAVI 120 (252)
Q Consensus 43 ~~~~~~~~~~vLD~G~G-~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~~~D~v~ 120 (252)
+...++++.+|||+||| +|.++..++.....+++++|+++.+++.+++++...+ +++++++|+.....+++++||+|+
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~ 128 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIF 128 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEE
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEE
Confidence 45556788899999999 9999999998833499999999999999999885433 799999998655435668999999
Q ss_pred eccchhhhcC------------CCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 121 DKGTLDSLMC------------GTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 121 ~~~~l~~~~~------------~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
++.++++... +.........+++++.++|+|||.+++.....+
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 183 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE 183 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH
Confidence 9988765410 001123358899999999999999999775544
No 78
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.66 E-value=1.1e-15 Score=128.49 Aligned_cols=120 Identities=23% Similarity=0.253 Sum_probs=95.1
Q ss_pred HHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC---------CCCCeEEEccccCCC--
Q 025475 41 PFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE---------IPQLKYLQMDVRDMS-- 109 (252)
Q Consensus 41 ~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~---------~~~v~~~~~d~~~~~-- 109 (252)
+.+....+++.+|||+|||+|.++..+++.+..+++++|+|+.+++.++++... ..+++++++|+.+.+
T Consensus 26 ~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 105 (313)
T 3bgv_A 26 EKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLI 105 (313)
T ss_dssp HHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCST
T ss_pred HHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchh
Confidence 334444457789999999999999999987656999999999999999998742 236899999998864
Q ss_pred -CC--CCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 110 -FF--EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 110 -~~--~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
.+ ++++||+|+++.++||+ ..+.++...++++++++|+|||.+++..+...
T Consensus 106 ~~~~~~~~~fD~V~~~~~l~~~---~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (313)
T 3bgv_A 106 DKFRDPQMCFDICSCQFVCHYS---FESYEQADMMLRNACERLSPGGYFIGTTPNSF 159 (313)
T ss_dssp TTCSSTTCCEEEEEEETCGGGG---GGSHHHHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred hhcccCCCCEEEEEEecchhhc---cCCHHHHHHHHHHHHHHhCCCcEEEEecCChH
Confidence 13 34589999999999874 12346778999999999999999999887653
No 79
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.65 E-value=5.4e-16 Score=121.52 Aligned_cols=121 Identities=18% Similarity=0.255 Sum_probs=94.6
Q ss_pred HHHHhhCCCCCcEEEEcccCcHhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCC
Q 025475 41 PFVRKYIPTSSRVLMVGCGNALMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDES 115 (252)
Q Consensus 41 ~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~--~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~ 115 (252)
.++...++++.+|||+|||+|.++..+++. +..+++++|+++.+++.+++++... ++++++++|+.+++...+++
T Consensus 14 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 93 (197)
T 3eey_A 14 DYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCP 93 (197)
T ss_dssp HHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSC
T ss_pred HHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCC
Confidence 344455778889999999999999999987 3459999999999999999998542 47999999998875445678
Q ss_pred eeEEEeccchhhhc--CCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 116 FDAVIDKGTLDSLM--CGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 116 ~D~v~~~~~l~~~~--~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
||+|+++.++.... .......+...+++++.++|+|||.+++..+.
T Consensus 94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 99999987651100 00112356778999999999999999998754
No 80
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.65 E-value=8.4e-16 Score=121.24 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=93.2
Q ss_pred hHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCCCCCCCCCe
Q 025475 39 LRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFFEDESF 116 (252)
Q Consensus 39 l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~~ 116 (252)
+.+.+...++++.+|||+|||+|.++..+++.+..+++++|+++.+++.+++++... .+++++++|+.+.. .++|
T Consensus 50 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~~~f 126 (205)
T 3grz_A 50 AMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV---DGKF 126 (205)
T ss_dssp HHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC---CSCE
T ss_pred HHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC---CCCc
Confidence 455666667788899999999999999999887669999999999999999987532 25999999997753 4789
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
|+|+++.+++++ ..+++++.++|+|||.+++.++..
T Consensus 127 D~i~~~~~~~~~----------~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 127 DLIVANILAEIL----------LDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp EEEEEESCHHHH----------HHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred eEEEECCcHHHH----------HHHHHHHHHhcCCCCEEEEEecCc
Confidence 999998877665 688999999999999999976543
No 81
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.65 E-value=4.3e-15 Score=121.58 Aligned_cols=113 Identities=16% Similarity=0.193 Sum_probs=88.2
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC---CCeEEEccccCCCC-CCCCCeeEEEeccc
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP---QLKYLQMDVRDMSF-FEDESFDAVIDKGT 124 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~---~v~~~~~d~~~~~~-~~~~~~D~v~~~~~ 124 (252)
++.+|||+|||+|.++..++..+..+++++|+++.+++.|++++...+ +++++++|+.+... ++.++||+|+++.+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 677999999999999999999875599999999999999999985432 69999999988752 44689999999877
Q ss_pred hhhh-cCCCCC------------hhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 125 LDSL-MCGTNA------------PISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 125 l~~~-~~~~~~------------~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+... ..+..+ ......+++.+.++|+|||.++++...
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 6432 111111 134678999999999999999987643
No 82
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.65 E-value=1.3e-15 Score=125.24 Aligned_cols=104 Identities=13% Similarity=0.242 Sum_probs=84.8
Q ss_pred CCCcEEEEcccCcH----hHHHHHHc-C----CCcEEEEeCCHHHHHHHHHhhc--------------------C---C-
Q 025475 49 TSSRVLMVGCGNAL----MSEDMVKD-G----YEDIVNIDISSVAIDMMKMKYE--------------------E---I- 95 (252)
Q Consensus 49 ~~~~vLD~G~G~G~----~~~~l~~~-~----~~~v~~vD~s~~~i~~a~~~~~--------------------~---~- 95 (252)
++.+|+|+|||+|. ++..+++. + ..+|+|+|+|+.|++.|++..- . .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999998 55555554 3 1389999999999999998641 0 0
Q ss_pred ---------CCCeEEEccccCCCCCC-CCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEE
Q 025475 96 ---------PQLKYLQMDVRDMSFFE-DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 158 (252)
Q Consensus 96 ---------~~v~~~~~d~~~~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~ 158 (252)
.++.+.+.|+.+.+ ++ .++||+|+|.++++|+ +++...++++++++.|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~-~~~~~~fDlI~crnvliyf-----~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQ-YNVPGPFDAIFCRNVMIYF-----DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSS-CCCCCCEEEEEECSSGGGS-----CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCC-CCcCCCeeEEEECCchHhC-----CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 25889999998854 44 5789999999999999 7778899999999999999999873
No 83
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.64 E-value=1.6e-15 Score=130.52 Aligned_cols=110 Identities=18% Similarity=0.321 Sum_probs=93.5
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++++...+ +++++++|+.+.. ..+++||+|+++.++|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~-~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL-TEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS-CTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc-ccCCCeEEEEECCchhh
Confidence 567999999999999999999865 99999999999999999986533 5899999999886 45679999999999987
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
. ..........+++++.++|+|||.++++....
T Consensus 311 ~--~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 311 G--GAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp T--CSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred c--ccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 2 00123788999999999999999999987544
No 84
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.63 E-value=2.2e-15 Score=120.97 Aligned_cols=101 Identities=19% Similarity=0.210 Sum_probs=86.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
..++.+|||+|||+|.++..+++.+ .+++++|+++.+++.+++++...++++++++|+.+.. ...++||+|++..+++
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVVVWATAP 145 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEEESSBBS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc-ccCCCccEEEECCcHH
Confidence 3567799999999999999999987 5999999999999999999865557899999998743 2457899999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
|+ . .++.++|+|||.+++.....
T Consensus 146 ~~-------~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 146 TL-------L------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp SC-------C------HHHHHTEEEEEEEEEEECSS
T ss_pred HH-------H------HHHHHHcCCCcEEEEEEcCC
Confidence 98 2 36889999999999987544
No 85
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.63 E-value=2.3e-15 Score=124.27 Aligned_cols=109 Identities=21% Similarity=0.273 Sum_probs=91.1
Q ss_pred CCCcEEEEcccC---cHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----------CCCCC
Q 025475 49 TSSRVLMVGCGN---ALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----------FFEDE 114 (252)
Q Consensus 49 ~~~~vLD~G~G~---G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----------~~~~~ 114 (252)
+..+|||+|||+ |.++..+.... ..+|+++|+|+.|++.+++++...++++++++|+.+.. .+...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 346999999999 98877766652 35999999999999999999865568999999997631 02334
Q ss_pred CeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 115 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+||+|++..++||+ +++++..++++++++|+|||+|++.+...
T Consensus 157 ~~d~v~~~~vlh~~-----~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGMLHYL-----SPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTTGGGS-----CTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCEEEEEechhhhC-----CcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 89999999999999 55568999999999999999999998765
No 86
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.63 E-value=4e-15 Score=118.05 Aligned_cols=103 Identities=15% Similarity=0.125 Sum_probs=80.2
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCC---CCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM---SFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~---~~~~~~~~D~v~~~ 122 (252)
++++.+|||+|||+|..+..+++.. ..+|+|+|+|+.|++.+.+..+..+++.++++|+.+. ..+. ++||+|+++
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 3577799999999999999998873 4589999999998776665554445788888998774 2133 789999987
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.. .+.+...++++++++|||||.+++..
T Consensus 134 ~~---------~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 134 IA---------QKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CC---------STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc---------ChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 21 22455667999999999999999874
No 87
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.62 E-value=5.2e-16 Score=129.21 Aligned_cols=107 Identities=13% Similarity=0.073 Sum_probs=81.7
Q ss_pred CCCcEEEEcccCcHhHHHH----HHcC-CCc--EEEEeCCHHHHHHHHHhhcCC---CCCe--EEEccccCCC-----CC
Q 025475 49 TSSRVLMVGCGNALMSEDM----VKDG-YED--IVNIDISSVAIDMMKMKYEEI---PQLK--YLQMDVRDMS-----FF 111 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l----~~~~-~~~--v~~vD~s~~~i~~a~~~~~~~---~~v~--~~~~d~~~~~-----~~ 111 (252)
++.+|||+|||+|.++..+ +..+ ... ++++|+|+.|++.+++++... +++. +.++++.+++ .+
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 4569999999999866543 3322 233 399999999999999987532 3444 3455554432 13
Q ss_pred CCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 112 EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 112 ~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
++++||+|++..++||+ +++.+++++++++|||||.+++.....
T Consensus 132 ~~~~fD~V~~~~~l~~~-------~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYV-------KDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp CCCCEEEEEEESCGGGC-------SCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred CCCceeEEEEeeeeeec-------CCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 56789999999999999 899999999999999999999987553
No 88
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.62 E-value=6e-15 Score=114.68 Aligned_cols=116 Identities=15% Similarity=0.289 Sum_probs=95.5
Q ss_pred hHHHHHhhC--CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCC--CeEEEccccCCCCCC
Q 025475 39 LRPFVRKYI--PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQ--LKYLQMDVRDMSFFE 112 (252)
Q Consensus 39 l~~~~~~~~--~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~--v~~~~~d~~~~~~~~ 112 (252)
..+.+...+ .++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++.. ..+ ++++++|+.+. ..
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~--~~ 116 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--VK 116 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--CT
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc--cc
Confidence 334444443 36679999999999999999988 45999999999999999998753 234 89999999885 35
Q ss_pred CCCeeEEEeccchhh-hcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 113 DESFDAVIDKGTLDS-LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 113 ~~~~D~v~~~~~l~~-~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
.++||+|+++.++++ . .....+++++.++|+|||.+++.......
T Consensus 117 ~~~~D~v~~~~~~~~~~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 117 DRKYNKIITNPPIRAGK-------EVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp TSCEEEEEECCCSTTCH-------HHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred cCCceEEEECCCcccch-------hHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 678999999988876 4 77889999999999999999999876543
No 89
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.62 E-value=6e-16 Score=118.95 Aligned_cols=115 Identities=15% Similarity=0.168 Sum_probs=92.2
Q ss_pred chhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCCCCC
Q 025475 36 YSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFED 113 (252)
Q Consensus 36 ~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~~~~ 113 (252)
+..+-..+...+++..+|||+|||+|.++..++... ..+|+++|+|+.|++.+++++...+ ..++..+|.... .+.
T Consensus 36 ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~--~~~ 113 (200)
T 3fzg_A 36 LNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD--VYK 113 (200)
T ss_dssp HHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH--HTT
T ss_pred HHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc--CCC
Confidence 344445555667888899999999999999997773 4499999999999999999986533 224444666544 356
Q ss_pred CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 114 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
++||+|++..++|++ ++++..+.++.+.|+|||+++-..
T Consensus 114 ~~~DvVLa~k~LHlL-------~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 114 GTYDVVFLLKMLPVL-------KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp SEEEEEEEETCHHHH-------HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred CCcChhhHhhHHHhh-------hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 789999999999999 888888889999999999987655
No 90
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.62 E-value=7.2e-15 Score=115.82 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=87.1
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
+.++.+|||+|||+|.++..+++.+ ..+++++|+++.+++.+++++.. .++++++++|+.+.. ...++||+|++..
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~i~~~~ 116 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL-DDLPDPDRVFIGG 116 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC-TTSCCCSEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh-hcCCCCCEEEECC
Confidence 4567799999999999999999986 46999999999999999998743 357999999997654 2336799999876
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+++ +...+++++.++|+|||.+++....
T Consensus 117 ~~~----------~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 117 SGG----------MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp CTT----------CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred CCc----------CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 544 4578999999999999999998755
No 91
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.62 E-value=8.6e-15 Score=117.20 Aligned_cols=123 Identities=15% Similarity=0.163 Sum_probs=96.8
Q ss_pred eeeeccchhhHHHHHhh-----CCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEE
Q 025475 30 FDWYQRYSALRPFVRKY-----IPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQ 102 (252)
Q Consensus 30 ~~~~~~~~~l~~~~~~~-----~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~ 102 (252)
..|-...+.+...+..- ++|+.+|||+|||+|.++..+++. | .++|+++|+++.|++.++++....+++..+.
T Consensus 53 r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~ 132 (233)
T 4df3_A 53 REWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPIL 132 (233)
T ss_dssp EECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEE
T ss_pred eeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEE
Confidence 34544444455544432 578999999999999999999987 4 5689999999999999999988777899999
Q ss_pred ccccCCCC--CCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 103 MDVRDMSF--FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 103 ~d~~~~~~--~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+|..+... ...+++|+|++.. .+. .+...++.++.+.|||||.++++...
T Consensus 133 ~d~~~p~~~~~~~~~vDvVf~d~--~~~-------~~~~~~l~~~~r~LKpGG~lvI~ik~ 184 (233)
T 4df3_A 133 GDARFPEKYRHLVEGVDGLYADV--AQP-------EQAAIVVRNARFFLRDGGYMLMAIKA 184 (233)
T ss_dssp SCTTCGGGGTTTCCCEEEEEECC--CCT-------THHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EeccCccccccccceEEEEEEec--cCC-------hhHHHHHHHHHHhccCCCEEEEEEec
Confidence 99876431 4567899998643 233 67788999999999999999987543
No 92
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.62 E-value=3.3e-15 Score=119.37 Aligned_cols=103 Identities=21% Similarity=0.335 Sum_probs=89.4
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC-CCCCCCeeEEEeccchh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-FFEDESFDAVIDKGTLD 126 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~~~D~v~~~~~l~ 126 (252)
.++.+|||+|||+|.++..+++.+ .+++++|+++.+++.++++. .+++++|+.+.. .+++++||+|++..+++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~ 104 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL-----DHVVLGDIETMDMPYEEEQFDCVIFGDVLE 104 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS-----SEEEESCTTTCCCCSCTTCEEEEEEESCGG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC-----CcEEEcchhhcCCCCCCCccCEEEECChhh
Confidence 467799999999999999999986 69999999999999998765 378889988632 15678999999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
|+ .++..+++++.++|+|||.+++..+...
T Consensus 105 ~~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 105 HL-------FDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp GS-------SCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred hc-------CCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 99 7788999999999999999999886543
No 93
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.62 E-value=1e-15 Score=120.63 Aligned_cols=106 Identities=15% Similarity=0.191 Sum_probs=87.0
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--C--CCCeEEEccccCCCC-CCCCC-eeEEEec
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--I--PQLKYLQMDVRDMSF-FEDES-FDAVIDK 122 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~--~~v~~~~~d~~~~~~-~~~~~-~D~v~~~ 122 (252)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++.. . ++++++++|+.+... ..+++ ||+|+++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 4679999999999999998888766999999999999999998853 2 478999999987531 23578 9999998
Q ss_pred cchhhhcCCCCChhhHHHHHHHH--HHcccCCcEEEEEEcCC
Q 025475 123 GTLDSLMCGTNAPISASQMLGEV--SRLLKPGGIYMLITYGD 162 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~--~~~L~~gG~l~i~~~~~ 162 (252)
.+++ . .....+++.+ .++|+|||.+++.....
T Consensus 133 ~~~~-~-------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-F-------NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-S-------CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-C-------ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8744 4 5677788888 67899999999877543
No 94
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.61 E-value=6.1e-15 Score=126.52 Aligned_cols=109 Identities=16% Similarity=0.197 Sum_probs=93.2
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCC-CCCCCCeeEEEec
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMS-FFEDESFDAVIDK 122 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~-~~~~~~~D~v~~~ 122 (252)
....+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++++... ++++++.+|+.+.. +++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 355699999999999999999863 458999999 99999999988643 36999999998852 144 689999999
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
.++|++ ++++..+++++++++|+|||.+++.+...+
T Consensus 256 ~vlh~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 256 QFLDCF-----SEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp SCSTTS-----CHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred chhhhC-----CHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 999999 777888999999999999999999886543
No 95
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.60 E-value=5.5e-15 Score=135.42 Aligned_cols=107 Identities=13% Similarity=0.221 Sum_probs=92.8
Q ss_pred CCCcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhc--------CCCCCeEEEccccCCCCCCCCCeeE
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYE--------EIPQLKYLQMDVRDMSFFEDESFDA 118 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~a~~~~~--------~~~~v~~~~~d~~~~~~~~~~~~D~ 118 (252)
++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.|++.|++++. ..++++++++|+.+++ +.+++||+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp-~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFD-SRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCC-TTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCC-cccCCeeE
Confidence 67799999999999999999986 2599999999999999988553 2347999999999988 77789999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
|++..+++|+ ++.....+++++.++|+|| .+++.+++.
T Consensus 800 VV~~eVLeHL-----~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 800 GTCLEVIEHM-----EEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EEEESCGGGS-----CHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EEEeCchhhC-----ChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 9999999999 6666678999999999999 887777554
No 96
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.60 E-value=5.5e-15 Score=125.65 Aligned_cols=104 Identities=19% Similarity=0.208 Sum_probs=86.7
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
..++.+|||+|||+|.++..+++.|..+|+++|+++ +++.|+++++.. ++++++++|+.+++ +++++||+|++..
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH-LPVEKVDVIISEW 139 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSCSCEEEEEECC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc-CCCCcEEEEEEcC
Confidence 356779999999999999999998766999999996 999999887532 47999999999987 7778999999987
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEE
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYM 156 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 156 (252)
+.+.+ ....++..++.++.++|+|||.++
T Consensus 140 ~~~~l----~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 140 MGYFL----LFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CBTTB----TTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred chhhc----cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 32222 122678899999999999999987
No 97
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.60 E-value=3e-15 Score=120.00 Aligned_cols=100 Identities=12% Similarity=0.321 Sum_probs=83.7
Q ss_pred HHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEcccc-CCCCCC-CCCee
Q 025475 40 RPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVR-DMSFFE-DESFD 117 (252)
Q Consensus 40 ~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~-~~~~~~-~~~~D 117 (252)
..++...++++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++ .++++++++|+. .++ +. +++||
T Consensus 39 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---~~~~~~~~~d~~~~~~-~~~~~~fD 113 (226)
T 3m33_A 39 DLWLSRLLTPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARAN---APHADVYEWNGKGELP-AGLGAPFG 113 (226)
T ss_dssp HHHHHHHCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHH---CTTSEEEECCSCSSCC-TTCCCCEE
T ss_pred HHHHHhcCCCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHh---CCCceEEEcchhhccC-CcCCCCEE
Confidence 344555567888999999999999999999864 999999999999999998 357999999995 455 66 78999
Q ss_pred EEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEE
Q 025475 118 AVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYML 157 (252)
Q Consensus 118 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i 157 (252)
+|+++ .++..++++++++|+|||.++.
T Consensus 114 ~v~~~-------------~~~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 114 LIVSR-------------RGPTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp EEEEE-------------SCCSGGGGGHHHHEEEEEEEEE
T ss_pred EEEeC-------------CCHHHHHHHHHHHcCCCcEEEE
Confidence 99986 2345678899999999999983
No 98
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.60 E-value=5.6e-17 Score=131.20 Aligned_cols=99 Identities=16% Similarity=0.192 Sum_probs=85.9
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccch
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTL 125 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l 125 (252)
++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.+++++... ++++++++|+.+.+ ++++||+|+++.++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSPPW 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECCCC
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECCCc
Confidence 67799999999999999999987 59999999999999999988543 37899999998875 55789999999999
Q ss_pred hhhcCCCCChhhHHHHHHHHHHcccCCcEEEE
Q 025475 126 DSLMCGTNAPISASQMLGEVSRLLKPGGIYML 157 (252)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i 157 (252)
++. ......+.+++++|+|||.+++
T Consensus 155 ~~~-------~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 155 GGP-------DYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp SSG-------GGGGSSSBCTTTSCSSCHHHHH
T ss_pred CCc-------chhhhHHHHHHhhcCCcceeHH
Confidence 988 5555577788999999998655
No 99
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.59 E-value=1.6e-14 Score=114.71 Aligned_cols=114 Identities=21% Similarity=0.232 Sum_probs=87.0
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCC-CCCCCeeEEEecc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSF-FEDESFDAVIDKG 123 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~-~~~~~~D~v~~~~ 123 (252)
+++.+|||+|||+|.++..++... ..+++|+|+++.+++.|+++... .++++++++|+.+++. +++++||+|+++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 456799999999999999999874 45899999999999999998743 3579999999988642 4567899999986
Q ss_pred chhhhcCC-CCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 124 TLDSLMCG-TNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 124 ~l~~~~~~-~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+..+.... .........+++++.++|+|||.+++.+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 54322000 000002367999999999999999987643
No 100
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.59 E-value=3.8e-15 Score=123.22 Aligned_cols=117 Identities=13% Similarity=0.131 Sum_probs=94.7
Q ss_pred eeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CC-CCeEEEccccCC
Q 025475 32 WYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IP-QLKYLQMDVRDM 108 (252)
Q Consensus 32 ~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~-~v~~~~~d~~~~ 108 (252)
|.+........+...++++.+|||+|||+|.++..++..+..+|+++|+|+.+++.+++++.. .. +++++++|+.+.
T Consensus 108 f~~~~~~~~~~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~ 187 (278)
T 2frn_A 108 FSPANVKERVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF 187 (278)
T ss_dssp CCGGGHHHHHHHHHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC
T ss_pred EcCCcHHHHHHHHHhCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHh
Confidence 444444455666667788899999999999999999998754799999999999999998753 22 488999999998
Q ss_pred CCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 109 SFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 109 ~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
. . .++||+|+++.. .....++.++.++|+|||.+++.++.
T Consensus 188 ~-~-~~~fD~Vi~~~p-----------~~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 188 P-G-ENIADRILMGYV-----------VRTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp C-C-CSCEEEEEECCC-----------SSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred c-c-cCCccEEEECCc-----------hhHHHHHHHHHHHCCCCeEEEEEEee
Confidence 7 3 678999998644 23356788999999999999998765
No 101
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.59 E-value=8.4e-16 Score=122.10 Aligned_cols=88 Identities=26% Similarity=0.419 Sum_probs=76.5
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
.++.+|||+|||+|.++..++ .+++++|+++. +++++++|+.+.+ +++++||+|++..++|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~-------------~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~- 126 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL-------------DPRVTVCDMAQVP-LEDESVDVAVFCLSLM- 126 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS-------------STTEEESCTTSCS-CCTTCEEEEEEESCCC-
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC-------------CceEEEeccccCC-CCCCCEeEEEEehhcc-
Confidence 566799999999999988772 48999999986 4688999999887 7788999999999886
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
. .++..++++++++|+|||.+++.++.
T Consensus 127 ~-------~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 127 G-------TNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp S-------SCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred c-------cCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 4 57789999999999999999998754
No 102
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.59 E-value=2.2e-14 Score=118.35 Aligned_cols=102 Identities=11% Similarity=0.155 Sum_probs=84.2
Q ss_pred hCCCCCcEEEEcccCcHhHHH-HHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 46 YIPTSSRVLMVGCGNALMSED-MVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~G~~~~~-l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
.++++.+|||+|||+|.++.. +++....+|+++|+++.+++.|+++++. ..+++++++|+.+++ +++||+|++.
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~---d~~FDvV~~~ 195 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID---GLEFDVLMVA 195 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG---GCCCSEEEEC
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC---CCCcCEEEEC
Confidence 467888999999999876644 4443345999999999999999998753 358999999998864 5789999975
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
.. . ++..++++++.++|||||++++...
T Consensus 196 a~---~-------~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 196 AL---A-------EPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp TT---C-------SCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CC---c-------cCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 43 3 6788999999999999999998774
No 103
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.59 E-value=3.8e-15 Score=122.64 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=90.0
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHH------HHHHHHHhhcCC---CCCeEEEcc-c--cCCCCCC
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSV------AIDMMKMKYEEI---PQLKYLQMD-V--RDMSFFE 112 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~------~i~~a~~~~~~~---~~v~~~~~d-~--~~~~~~~ 112 (252)
++++.+|||+|||+|.++..+++. | ..+++++|+|+. +++.+++++... ++++++++| . ...+ ++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~ 119 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGP-IA 119 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGG-GT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCC-CC
Confidence 467789999999999999999987 4 259999999997 999999988543 368999998 3 3344 56
Q ss_pred CCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 113 DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 113 ~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
+++||+|++..+++|+ .+...+++.+.++++|||.+++.++..+
T Consensus 120 ~~~fD~v~~~~~l~~~-------~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYF-------ASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp TCCCSEEEEESCGGGS-------SCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred CCCEEEEEEccchhhC-------CCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 7899999999999999 5666677777888888999999987653
No 104
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.59 E-value=2.8e-15 Score=128.31 Aligned_cols=116 Identities=8% Similarity=0.057 Sum_probs=91.0
Q ss_pred HHHHHhh-CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc---------C--CCCCeEEEcccc
Q 025475 40 RPFVRKY-IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE---------E--IPQLKYLQMDVR 106 (252)
Q Consensus 40 ~~~~~~~-~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~---------~--~~~v~~~~~d~~ 106 (252)
..++... +.++.+|||+|||+|.++..++.. +..+++|||+++.+++.|+++.+ + ..+++++++|+.
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~ 242 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL 242 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTT
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECccc
Confidence 3344332 567889999999999999999865 55469999999999999987531 1 257999999999
Q ss_pred CCCCCCC--CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 107 DMSFFED--ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 107 ~~~~~~~--~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
+.+ +.+ ..||+|+++.++ +. ++....|.++++.|||||.+++.+...|.
T Consensus 243 ~lp-~~d~~~~aDVVf~Nn~~-F~-------pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 243 SEE-WRERIANTSVIFVNNFA-FG-------PEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp SHH-HHHHHHTCSEEEECCTT-CC-------HHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred CCc-cccccCCccEEEEcccc-cC-------chHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 876 433 469999998765 33 67788889999999999999998755443
No 105
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.59 E-value=2.9e-15 Score=115.31 Aligned_cols=107 Identities=15% Similarity=0.116 Sum_probs=85.5
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
.++.+|||+|||+|.++..+++.+..+++++|+++.+++.+++++... ++++++++|+.+......++||+|+++.+
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 466799999999999999999987669999999999999999988654 26899999988742133457999999877
Q ss_pred hhhhcCCCCChhhHHHHHHHHH--HcccCCcEEEEEEcCC
Q 025475 125 LDSLMCGTNAPISASQMLGEVS--RLLKPGGIYMLITYGD 162 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~--~~L~~gG~l~i~~~~~ 162 (252)
++. ......++.+. ++|+|||.+++.....
T Consensus 110 ~~~--------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 110 YAK--------ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SHH--------HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCc--------chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 643 34456666666 9999999999877543
No 106
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.59 E-value=1.2e-14 Score=114.99 Aligned_cols=100 Identities=16% Similarity=0.174 Sum_probs=85.7
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
..++.+|||+|||+|.++..+++.+ .+++++|+++.+++.+++++.. .++++++++|+.+.. ...++||+|++..+
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW-QARAPFDAIIVTAA 152 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEESSB
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC-ccCCCccEEEEccc
Confidence 3567799999999999999999984 5999999999999999998854 347999999998865 45678999999999
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
++|+ .+ ++.++|+|||++++....
T Consensus 153 ~~~~-------~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 153 PPEI-------PT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CSSC-------CT------HHHHTEEEEEEEEEEECS
T ss_pred hhhh-------hH------HHHHhcccCcEEEEEEcC
Confidence 9988 22 578999999999998754
No 107
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.59 E-value=6.9e-14 Score=114.52 Aligned_cols=112 Identities=16% Similarity=0.170 Sum_probs=86.6
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC---CC---CCeEEEccccCCC------CCCCC
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE---IP---QLKYLQMDVRDMS------FFEDE 114 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~---~~---~v~~~~~d~~~~~------~~~~~ 114 (252)
.++.+|||+|||+|.++..++... ..+++++|+++.+++.|++++.. .+ +++++++|+.+.. .++.+
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 356699999999999999999885 45899999999999999999865 33 4899999998872 14567
Q ss_pred CeeEEEeccchhhhcCCC------------CChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 115 SFDAVIDKGTLDSLMCGT------------NAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~------------~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+||+|+++.++.... +. ........+++.+.++|+|||.+++...
T Consensus 115 ~fD~Vv~nPPy~~~~-~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAG-DRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp CEEEEEECCCC----------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcCEEEECCCCcCCC-CCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 899999997654320 00 0112367889999999999999988664
No 108
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.59 E-value=1.2e-14 Score=111.39 Aligned_cols=102 Identities=15% Similarity=0.173 Sum_probs=81.0
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
.++.+|||+|||+|.++..+++.+ +++|+|+|+.|++. .++++++++|+.+. +++++||+|+++.++++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~-------~~~~~~~~~d~~~~--~~~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES-------HRGGNLVRADLLCS--INQESVDVVVFNPPYVP 90 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT-------CSSSCEEECSTTTT--BCGGGCSEEEECCCCBT
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc-------ccCCeEEECChhhh--cccCCCCEEEECCCCcc
Confidence 456699999999999999999986 99999999999987 35789999999884 46689999999998886
Q ss_pred hcCC--CCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 128 LMCG--TNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 128 ~~~~--~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
..-. .....+...+++++.+.| |||.+++....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 91 DTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp TCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred CCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 5000 001123466788888888 99999998754
No 109
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.58 E-value=8.9e-15 Score=117.59 Aligned_cols=101 Identities=16% Similarity=0.231 Sum_probs=84.1
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccC----CCCCCCCCeeEEEe
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD----MSFFEDESFDAVID 121 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~----~~~~~~~~~D~v~~ 121 (252)
+.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++....+++.++++|+.+ .+ +. ++||+|+.
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~-~~-~~~D~v~~ 149 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYAN-IV-EKVDVIYE 149 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTT-TS-CCEEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccc-cC-ccEEEEEE
Confidence 346779999999999999999988 4469999999999999999988665789999999987 54 44 68999993
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEE
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 158 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~ 158 (252)
++ +.+.....+++++.++|+|||.+++.
T Consensus 150 -----~~----~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 -----DV----AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp -----CC----CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----ec----CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 33 23345578899999999999999986
No 110
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.58 E-value=4.1e-15 Score=117.26 Aligned_cols=104 Identities=5% Similarity=0.026 Sum_probs=84.8
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.+++++... ++++++++|+.+......++||+|+++.+++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 46799999999999999988887669999999999999999988543 4789999999874214567899999987744
Q ss_pred hhcCCCCChhhHHHHHHHHHH--cccCCcEEEEEEc
Q 025475 127 SLMCGTNAPISASQMLGEVSR--LLKPGGIYMLITY 160 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~--~L~~gG~l~i~~~ 160 (252)
. .....+++.+.+ +|+|||.+++...
T Consensus 134 -~-------~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 134 -R-------GLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp -T-------TTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred -C-------CcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 3 456677777765 5999999988764
No 111
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.58 E-value=6.4e-16 Score=134.89 Aligned_cols=105 Identities=15% Similarity=0.226 Sum_probs=84.9
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++........+...+..+++ +++++||+|++..+++|
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~-~~~~~fD~I~~~~vl~h 183 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVR-RTEGPANVIYAANTLCH 183 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHH-HHHCCEEEEEEESCGGG
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcc-cCCCCEEEEEECChHHh
Confidence 4677999999999999999999876 999999999999999987211001112233344444 55689999999999999
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+ .++..++++++++|+|||++++....
T Consensus 184 ~-------~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 184 I-------PYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp C-------TTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred c-------CCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9 79999999999999999999998754
No 112
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.58 E-value=6.4e-15 Score=125.67 Aligned_cols=104 Identities=18% Similarity=0.197 Sum_probs=87.6
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
.++.+|||+|||+|.++..+++.|..+|+|+|+| .+++.|+++.+.. ++++++++|+.+.+ ++.++||+|++..+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVE-LPVEKVDIIISEWM 142 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSSCEEEEEECCC
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHcc-CCCCceEEEEEccc
Confidence 4678999999999999999999987799999999 4999999987542 24999999999987 77789999999775
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEE
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYML 157 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i 157 (252)
.+++ .....+..++.++.++|+|||.++.
T Consensus 143 ~~~l----~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 143 GYCL----FYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BBTB----TBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccc----cCchhHHHHHHHHHHhCCCCCEEcc
Confidence 4433 1336788999999999999999864
No 113
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.58 E-value=6.8e-15 Score=118.70 Aligned_cols=113 Identities=13% Similarity=0.141 Sum_probs=82.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhc--------CCCCCeEEEccccC-CCC-CCCCC
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYE--------EIPQLKYLQMDVRD-MSF-FEDES 115 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~--------~~~~v~~~~~d~~~-~~~-~~~~~ 115 (252)
..++.+|||+|||+|.++..++... ...++|+|+++.|++.|++++. ...+++++++|+.+ ++. +++++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 3456699999999999999999874 4589999999999999987653 23589999999987 321 46788
Q ss_pred eeEEEeccchhhhcCCCCChhh---HHHHHHHHHHcccCCcEEEEEEcC
Q 025475 116 FDAVIDKGTLDSLMCGTNAPIS---ASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 116 ~D~v~~~~~l~~~~~~~~~~~~---~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
||.|+++..-.+.. ...... ...+++++.++|+|||.+++.+..
T Consensus 124 ~D~v~~~~~dp~~k--~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 124 LTKMFFLFPDPHFK--RTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEEESCC-------------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eeEEEEeCCCchhh--hhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 99998754322210 000001 147999999999999999988744
No 114
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.58 E-value=4.1e-15 Score=118.67 Aligned_cols=109 Identities=18% Similarity=0.173 Sum_probs=85.6
Q ss_pred CCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCC-CC-CCCCCeeEEEecc
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDM-SF-FEDESFDAVIDKG 123 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~-~~-~~~~~~D~v~~~~ 123 (252)
++.+|||+|||+|.++..++... ...|+|+|+++.+++.|+++... ..+++++++|+.++ +. ++++++|.|+++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 56799999999999999999874 45899999999999999998743 34799999998875 21 5678999999874
Q ss_pred chhhhcCCCCChhhH------HHHHHHHHHcccCCcEEEEEEcCC
Q 025475 124 TLDSLMCGTNAPISA------SQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~------~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+..+. ..... ..+++++.++|+|||.+++.+...
T Consensus 114 ~~p~~-----~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 114 PDPWH-----KARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 153 (218)
T ss_dssp CCCCC-----SGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred CCCcc-----chhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 32221 11111 369999999999999999988543
No 115
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.57 E-value=1.5e-14 Score=122.49 Aligned_cols=107 Identities=12% Similarity=0.131 Sum_probs=90.9
Q ss_pred CCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++++... ++++++.+|+.+. .+. +||+|++..+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~p~-~~D~v~~~~v 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP--LPA-GAGGYVLSAV 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC--CCC-SCSEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC--CCC-CCcEEEEehh
Confidence 45699999999999999998864 458999999 99999999987532 4799999999843 344 7999999999
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
+||+ +++...+++++++++|+|||++++.+...+.
T Consensus 245 lh~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 245 LHDW-----DDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp GGGS-----CHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred hccC-----CHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 9999 6666799999999999999999999876544
No 116
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.57 E-value=2.2e-15 Score=116.75 Aligned_cols=107 Identities=16% Similarity=0.146 Sum_probs=84.6
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCC---CCCCCeeEEEe
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSF---FEDESFDAVID 121 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~---~~~~~~D~v~~ 121 (252)
.++.+|||+|||+|.++..++..+..+++++|+++.+++.+++++... ++++++++|+.+... ...++||+|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 356799999999999999988887669999999999999999987532 368999999877421 12578999999
Q ss_pred ccchhhhcCCCCChhhHHHHHHHH--HHcccCCcEEEEEEcCC
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEV--SRLLKPGGIYMLITYGD 162 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~--~~~L~~gG~l~i~~~~~ 162 (252)
+.+++. ......+..+ .++|+|||.+++.....
T Consensus 123 ~~~~~~--------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 123 DPPYAK--------QEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp CCCGGG--------CCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCCc--------hhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 988552 2345556666 89999999999877543
No 117
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.57 E-value=7.5e-15 Score=121.25 Aligned_cols=120 Identities=14% Similarity=0.213 Sum_probs=90.0
Q ss_pred hHHHHHhhC-CCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCC
Q 025475 39 LRPFVRKYI-PTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDE 114 (252)
Q Consensus 39 l~~~~~~~~-~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~ 114 (252)
+...+...+ .++.+|||+|||+|..+..++.. +..+++++|+|+.+++.++++... .++++++++|+.+. .+.+
T Consensus 98 l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~--~~~~ 175 (276)
T 2b3t_A 98 LVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA--LAGQ 175 (276)
T ss_dssp HHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG--GTTC
T ss_pred HHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh--cccC
Confidence 344444444 45679999999999999999865 345999999999999999998753 23699999999875 3467
Q ss_pred CeeEEEeccchhhhc----------CCC--------CChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 115 SFDAVIDKGTLDSLM----------CGT--------NAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~----------~~~--------~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+||+|+++.+++... +.+ ........+++++.++|+|||.+++...
T Consensus 176 ~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 176 QFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp CEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 899999986543220 000 0014568899999999999999988653
No 118
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.56 E-value=5.5e-14 Score=115.99 Aligned_cols=102 Identities=17% Similarity=0.285 Sum_probs=86.3
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEe
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVID 121 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~ 121 (252)
+.++.+|||+|||+|.++..+++. + ..+++++|+++.+++.+++++... ++++++++|+.+. +++++||+|++
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~fD~Vi~ 185 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF--ISDQMYDAVIA 185 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC--CCSCCEEEEEE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc--CcCCCccEEEE
Confidence 356779999999999999999987 2 459999999999999999998654 4799999999883 56678999998
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
++ .++..+++++.++|+|||.+++.+...
T Consensus 186 -----~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 186 -----DI-------PDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp -----CC-------SCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred -----cC-------cCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 33 455688999999999999999988654
No 119
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.56 E-value=1e-14 Score=119.05 Aligned_cols=109 Identities=15% Similarity=0.215 Sum_probs=89.8
Q ss_pred HHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCCCCCCCeeE
Q 025475 40 RPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFEDESFDA 118 (252)
Q Consensus 40 ~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~~~D~ 118 (252)
.+.+...+.++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++....+ .+++.++|+.+. ++.++||+
T Consensus 111 ~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~--~~~~~fD~ 187 (254)
T 2nxc_A 111 LKALARHLRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA--LPFGPFDL 187 (254)
T ss_dssp HHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH--GGGCCEEE
T ss_pred HHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc--CcCCCCCE
Confidence 445555567788999999999999999999877 99999999999999999875432 288999988763 34568999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
|+++...+++ ..++.++.++|+|||.++++...
T Consensus 188 Vv~n~~~~~~----------~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 188 LVANLYAELH----------AALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp EEEECCHHHH----------HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCcHHHH----------HHHHHHHHHHcCCCCEEEEEeec
Confidence 9997655444 67899999999999999997754
No 120
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.56 E-value=1.7e-14 Score=122.09 Aligned_cols=108 Identities=12% Similarity=0.226 Sum_probs=92.8
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
.++.+|||+|||+|.++..+++.. ..+++++|++ .+++.+++++... ++++++++|+.+.+ ++. .||+|++..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~-~~D~v~~~~ 240 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD-YGN-DYDLVLLPN 240 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC-CCS-CEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC-CCC-CCcEEEEcc
Confidence 566799999999999999999873 4589999999 9999999987432 26999999998865 544 499999999
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
++||+ ++++..+++++++++|+|||++++.+...+
T Consensus 241 ~l~~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 241 FLHHF-----DVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp CGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred hhccC-----CHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 99999 777889999999999999999999987654
No 121
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.55 E-value=1.4e-14 Score=124.80 Aligned_cols=106 Identities=18% Similarity=0.203 Sum_probs=88.8
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
..++.+|||+|||+|.++..+++.|..+|+++|+| .|++.++++++.. ++++++++|+.+++ ++ ++||+|++..
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~-~~~D~Iv~~~ 137 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS-LP-EKVDVIISEW 137 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC-CS-SCEEEEEECC
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC-cC-CcceEEEEcC
Confidence 35677999999999999999999987799999999 9999999987542 35899999999987 55 7899999977
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+.+++ .....+..++..++++|+|||.+++..
T Consensus 138 ~~~~l----~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 138 MGYFL----LRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CBTTB----TTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hhhcc----cchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 65554 233568889999999999999987643
No 122
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.55 E-value=1.2e-14 Score=115.58 Aligned_cols=114 Identities=17% Similarity=0.172 Sum_probs=85.5
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCC-CCCCCeeEEEecc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSF-FEDESFDAVIDKG 123 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~-~~~~~~D~v~~~~ 123 (252)
.++.+|||+|||+|.++..++... ..+++|+|+|+.+++.|+++... .++++++++|+.+++. +++++||.|+++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 356799999999999999999873 45899999999999999998753 3479999999987532 4567899998764
Q ss_pred chhhhcCC-CCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 124 TLDSLMCG-TNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 124 ~l~~~~~~-~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+..+.... .........+++++.++|+|||.+++.+..
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 32221000 000001367899999999999999988744
No 123
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.55 E-value=6.4e-15 Score=133.39 Aligned_cols=115 Identities=17% Similarity=0.282 Sum_probs=92.2
Q ss_pred HHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC--CCeEEEccccCCCC-CCCCCeeEE
Q 025475 43 VRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP--QLKYLQMDVRDMSF-FEDESFDAV 119 (252)
Q Consensus 43 ~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~--~v~~~~~d~~~~~~-~~~~~~D~v 119 (252)
+.+.+.++.+|||||||.|.++..+++.|. +|+|||+++.+|+.|+.+....+ ++++.++++.++.. ..+++||+|
T Consensus 60 ~~~~~~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 60 LSRALGRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp HHHHHTSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred HHhhcCCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEE
Confidence 344455677999999999999999999987 89999999999999999886543 68999999988731 456789999
Q ss_pred EeccchhhhcCCCCChhhHH--HHHHHHHHcccCCcEEEEEEcCChhh
Q 025475 120 IDKGTLDSLMCGTNAPISAS--QMLGEVSRLLKPGGIYMLITYGDPKA 165 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~--~~l~~~~~~L~~gG~l~i~~~~~~~~ 165 (252)
+|..+++|+ .++. ..+..+.+.|+++|..++........
T Consensus 139 ~~~e~~ehv-------~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e~ 179 (569)
T 4azs_A 139 IGLSVFHHI-------VHLHGIDEVKRLLSRLADVTQAVILELAVKEE 179 (569)
T ss_dssp EEESCHHHH-------HHHHCHHHHHHHHHHHHHHSSEEEEECCCTTS
T ss_pred EECcchhcC-------CCHHHHHHHHHHHHHhccccceeeEEeccccc
Confidence 999999999 4443 33556778888888877777654443
No 124
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.55 E-value=2.9e-14 Score=122.58 Aligned_cols=120 Identities=18% Similarity=0.278 Sum_probs=91.8
Q ss_pred HHHHHhhCC--CCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCC-----CCeEEEccccCCCCC
Q 025475 40 RPFVRKYIP--TSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIP-----QLKYLQMDVRDMSFF 111 (252)
Q Consensus 40 ~~~~~~~~~--~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~-----~v~~~~~d~~~~~~~ 111 (252)
.+++...++ ++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.+++++...+ +++++..|+.+. +
T Consensus 211 ~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~--~ 288 (375)
T 4dcm_A 211 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG--V 288 (375)
T ss_dssp HHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT--C
T ss_pred HHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc--C
Confidence 344555544 34699999999999999999985 5699999999999999999875422 477899999884 5
Q ss_pred CCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 112 EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 112 ~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
++++||+|+++.++|+... ........+++++.++|+|||.++++.....
T Consensus 289 ~~~~fD~Ii~nppfh~~~~--~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 289 EPFRFNAVLCNPPFHQQHA--LTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp CTTCEEEEEECCCC---------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred CCCCeeEEEECCCcccCcc--cCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 6778999999999886300 1224456789999999999999999875543
No 125
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.55 E-value=1.6e-14 Score=123.19 Aligned_cols=109 Identities=17% Similarity=0.274 Sum_probs=92.5
Q ss_pred CCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccch
Q 025475 50 SSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTL 125 (252)
Q Consensus 50 ~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l 125 (252)
+.+|||+|||+|.++..+++.. ..+++++|+ +.+++.++++.... ++++++.+|+.+.+.+..+.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 6799999999999999999874 458999999 88999999887542 269999999987642245569999999999
Q ss_pred hhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 126 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
||+ ++++...++++++++|+|||.+++.+...+.
T Consensus 259 h~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 259 HYF-----DAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp GGS-----CHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred ccC-----CHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 999 6677899999999999999999999865443
No 126
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.55 E-value=4e-14 Score=121.65 Aligned_cols=108 Identities=11% Similarity=0.089 Sum_probs=91.8
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC---CCCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~---~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
++..+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++++.. .++++++.+|+.+. .+. .||+|++..
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~--~p~-~~D~v~~~~ 276 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET--IPD-GADVYLIKH 276 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC--CCS-SCSEEEEES
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC--CCC-CceEEEhhh
Confidence 456799999999999999999874 458999999 9999999998753 24799999999843 444 799999999
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
++|++ +++...+++++++++|+|||++++.+...+.
T Consensus 277 vlh~~-----~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 277 VLHDW-----DDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp CGGGS-----CHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred hhccC-----CHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99999 6666779999999999999999998865443
No 127
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.55 E-value=9.6e-15 Score=118.13 Aligned_cols=102 Identities=15% Similarity=0.185 Sum_probs=84.4
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCC---CCCeeEEEe
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFE---DESFDAVID 121 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~---~~~~D~v~~ 121 (252)
+++.+|||+|||+|..+..++.. ...+|+++|+|+.+++.++++... ..+++++++|+.+++ .. .++||+|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFG-QRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHT-TCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhc-ccccccCCccEEEE
Confidence 45679999999999999999864 245899999999999999998753 346999999998875 32 578999998
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
.. + .+...+++.+.++|+|||.+++....
T Consensus 148 ~~----~-------~~~~~~l~~~~~~LkpgG~l~~~~g~ 176 (240)
T 1xdz_A 148 RA----V-------ARLSVLSELCLPLVKKNGLFVALKAA 176 (240)
T ss_dssp EC----C-------SCHHHHHHHHGGGEEEEEEEEEEECC
T ss_pred ec----c-------CCHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 65 3 56788999999999999999887543
No 128
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.55 E-value=6.4e-14 Score=110.57 Aligned_cols=102 Identities=13% Similarity=0.092 Sum_probs=84.0
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CC-CCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IP-QLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~-~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
+.++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|+++++. .+ +++++++|+.+.. ....+||+|++..
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~~~D~v~~~~ 130 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL-ADLPLPEAVFIGG 130 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG-TTSCCCSEEEECS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc-ccCCCCCEEEECC
Confidence 456779999999999999999998 45999999999999999998743 33 7999999998843 2335799999865
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
.+ +.. +++++.++|+|||.+++.....
T Consensus 131 ~~-----------~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 131 GG-----------SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp CC-----------CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred cc-----------cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 32 344 8999999999999999987653
No 129
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.55 E-value=3.6e-14 Score=122.03 Aligned_cols=105 Identities=17% Similarity=0.184 Sum_probs=89.7
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
.+++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++++... ++++++++|+.+. ++. .||+|++.
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~-~~D~v~~~ 255 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP--LPV-TADVVLLS 255 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC--CSC-CEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc--CCC-CCCEEEEe
Confidence 3466799999999999999999874 458999999 99999999987532 2799999999763 333 49999999
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
.++||+ ++....+++++++++|+|||++++.+.
T Consensus 256 ~vl~~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 256 FVLLNW-----SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp SCGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccCC-----CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999 556667999999999999999999887
No 130
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.54 E-value=1.1e-14 Score=121.08 Aligned_cols=108 Identities=21% Similarity=0.318 Sum_probs=82.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC-------CCCCeEEEccccCCCCCCCCCeeE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE-------IPQLKYLQMDVRDMSFFEDESFDA 118 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~D~ 118 (252)
.+++.+|||+|||+|..+..+++.. ..+|++||+++.+++.|++++.. .++++++++|+.+......++||+
T Consensus 81 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp STTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 3556799999999999999999883 56899999999999999998742 358999999998864245678999
Q ss_pred EEeccchhhhcCCCCChhhH--HHHHHHHHHcccCCcEEEEEE
Q 025475 119 VIDKGTLDSLMCGTNAPISA--SQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~--~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+++.+-... +.... ..+++.+.++|+|||.+++..
T Consensus 161 Ii~D~~~p~~-----~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 161 IISDCTDPIG-----PGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEECC---------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCccC-----cchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 9997553222 11222 789999999999999999875
No 131
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=3e-14 Score=113.08 Aligned_cols=135 Identities=12% Similarity=0.030 Sum_probs=97.1
Q ss_pred CChhhHHHHhccCCCceeeec--cchhhHHHHHhh--CCCCCcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHH
Q 025475 14 GDALYWNARYVQEGGSFDWYQ--RYSALRPFVRKY--IPTSSRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDM 87 (252)
Q Consensus 14 ~~~~~w~~~y~~~~~~~~~~~--~~~~l~~~~~~~--~~~~~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~ 87 (252)
-...+|+..|......+.... ..+.+...+... ..++.+|||+|||+|.++..+++.+ ..+++++|+++.+++.
T Consensus 38 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~ 117 (215)
T 2yxe_A 38 LPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEK 117 (215)
T ss_dssp SCGGGGGGTTSCSCEEEETTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHH
T ss_pred CCchhhhhcccCCCccCCCCcEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHH
Confidence 344566666664433222111 112233333333 4567799999999999999999874 2599999999999999
Q ss_pred HHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 88 MKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 88 a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+++++.. .++++++++|+.... ...++||+|++..+++|+ . +++.++|+|||.+++.....
T Consensus 118 a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~-------~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 118 AERTLRKLGYDNVIVIVGDGTLGY-EPLAPYDRIYTTAAGPKI-------P------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp HHHHHHHHTCTTEEEEESCGGGCC-GGGCCEEEEEESSBBSSC-------C------HHHHHTEEEEEEEEEEESSS
T ss_pred HHHHHHHcCCCCeEEEECCcccCC-CCCCCeeEEEECCchHHH-------H------HHHHHHcCCCcEEEEEECCC
Confidence 9998743 346899999986543 235689999999999988 2 47899999999999987544
No 132
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.54 E-value=1.1e-14 Score=111.10 Aligned_cols=108 Identities=18% Similarity=0.242 Sum_probs=82.1
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCC-CC--CCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMS-FF--EDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~-~~--~~~~~D~v~~~ 122 (252)
++++.+|||+|||+|.++..+++.+. +++++|+++.+++.+++++...+ +++++++|+.+.. .. ..++||+|+++
T Consensus 39 ~~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 39 YPRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp CTTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred ccCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 44677999999999999999999876 59999999999999999875433 7899999987742 11 13479999998
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
.+++ - ..+...+.+.+ .++|+|||.+++.....
T Consensus 118 ~~~~-~-----~~~~~~~~~~~-~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 118 PPYA-M-----DLAALFGELLA-SGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCTT-S-----CTTHHHHHHHH-HTCEEEEEEEEEEEETT
T ss_pred CCCc-h-----hHHHHHHHHHh-hcccCCCcEEEEEeCCc
Confidence 8764 2 11333333333 59999999999877544
No 133
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.54 E-value=3.9e-14 Score=109.87 Aligned_cols=103 Identities=18% Similarity=0.278 Sum_probs=86.3
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCC-CCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFED-ESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~-~~~D~v~~~ 122 (252)
..++.+|||+|||+|.++..++..+ .+++++|+++.+++.+++++... +++++.++|+.+. ++. ++||+|++.
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~~ 107 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA--LCKIPDIDIAVVG 107 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH--HTTSCCEEEEEES
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh--cccCCCCCEEEEC
Confidence 4567799999999999999999987 69999999999999999987532 4789999998772 222 589999998
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
.+++++ ..+++++.++|+|||.+++..+..
T Consensus 108 ~~~~~~----------~~~l~~~~~~l~~gG~l~~~~~~~ 137 (192)
T 1l3i_A 108 GSGGEL----------QEILRIIKDKLKPGGRIIVTAILL 137 (192)
T ss_dssp CCTTCH----------HHHHHHHHHTEEEEEEEEEEECBH
T ss_pred CchHHH----------HHHHHHHHHhcCCCcEEEEEecCc
Confidence 776554 778999999999999999987653
No 134
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.54 E-value=3.2e-14 Score=114.44 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=83.0
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC--CCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS--FFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~--~~~~~~~D~v~~~ 122 (252)
+.++.+|||+|||+|.++..+++. + ..+++++|+|+.+++.+.++....++++++++|+.+.. ....++||+|+++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 456779999999999999999987 2 45899999999888777776654468999999998732 1346789999986
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.+ .+.....++.++.++|+|||.+++..
T Consensus 155 ~~---------~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 155 VA---------QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp CC---------CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC---------CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 44 22455667889999999999999854
No 135
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.54 E-value=4.6e-14 Score=120.80 Aligned_cols=109 Identities=19% Similarity=0.223 Sum_probs=92.6
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
.+++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++++... ++++++.+|+.+.+ +++ +|+|++.
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~--~D~v~~~ 263 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES-YPE--ADAVLFC 263 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC-CCC--CSEEEEE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC-CCC--CCEEEEe
Confidence 3566799999999999999999874 458999999 99999999987532 25999999998875 543 3999999
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
.++|++ ++++..+++++++++|+|||.+++.++..+.
T Consensus 264 ~vlh~~-----~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 300 (359)
T 1x19_A 264 RILYSA-----NEQLSTIMCKKAFDAMRSGGRLLILDMVIDD 300 (359)
T ss_dssp SCGGGS-----CHHHHHHHHHHHHTTCCTTCEEEEEEECCCC
T ss_pred chhccC-----CHHHHHHHHHHHHHhcCCCCEEEEEecccCC
Confidence 999999 6666999999999999999999998866543
No 136
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.53 E-value=2.9e-14 Score=121.36 Aligned_cols=118 Identities=18% Similarity=0.260 Sum_probs=92.4
Q ss_pred HHHHHhhC--CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCCCCCCC
Q 025475 40 RPFVRKYI--PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFEDES 115 (252)
Q Consensus 40 ~~~~~~~~--~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~~ 115 (252)
.+.+...+ .++.+|||+|||+|.++..+++.+ ..+++++|+|+.+++.+++++...+ .++++.+|+.+.. +++
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~---~~~ 261 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV---KGR 261 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC---CSC
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc---cCC
Confidence 34444444 245699999999999999999886 3489999999999999999885432 4678888887643 568
Q ss_pred eeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 116 FDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 116 ~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
||+|+++.++|+... .+......++++++++|+|||.+++.....
T Consensus 262 fD~Iv~~~~~~~g~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 262 FDMIISNPPFHDGMQ--TSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp EEEEEECCCCCSSSH--HHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred eeEEEECCCcccCcc--CCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 999999999885100 023678999999999999999999987654
No 137
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.53 E-value=3.1e-14 Score=120.48 Aligned_cols=103 Identities=23% Similarity=0.278 Sum_probs=86.2
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
.++.+|||+|||+|.++..+++.|..+|+++|++ .+++.|+++++.. ++++++++|+.+.+ ++.++||+|++..+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWM 114 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCC
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCc
Confidence 3567999999999999999999886699999999 5999999887532 36899999999987 66678999999865
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEE
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYM 156 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 156 (252)
.+++ .....+..++.++.++|+|||.++
T Consensus 115 ~~~l----~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 115 GYFL----LYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp BTTB----STTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhhc----ccHHHHHHHHHHHHhhcCCCeEEE
Confidence 4443 123667889999999999999987
No 138
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.53 E-value=4.3e-14 Score=108.56 Aligned_cols=106 Identities=11% Similarity=0.093 Sum_probs=83.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC--C-CCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI--P-QLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~--~-~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
..++.+|||+|||+|.++..++... ..+++++|+++.+++.+++++... + ++ ++++|..+..+...++||+|++.
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEEC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEEC
Confidence 3466799999999999999999873 468999999999999999987543 2 57 77888755321222789999998
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
.++++ ..+++++.++|+|||.+++.....+.
T Consensus 102 ~~~~~-----------~~~l~~~~~~L~~gG~l~~~~~~~~~ 132 (178)
T 3hm2_A 102 GGLTA-----------PGVFAAAWKRLPVGGRLVANAVTVES 132 (178)
T ss_dssp C-TTC-----------TTHHHHHHHTCCTTCEEEEEECSHHH
T ss_pred CcccH-----------HHHHHHHHHhcCCCCEEEEEeecccc
Confidence 77664 45789999999999999998866443
No 139
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.53 E-value=2.4e-14 Score=122.08 Aligned_cols=103 Identities=19% Similarity=0.230 Sum_probs=87.3
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
.++.+|||+|||+|.++..+++.+..+|+++|+|+ +++.++++++.. ++++++++|+.+.+ .+ ++||+|++..+
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~-~~~D~Ivs~~~ 125 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LP-EQVDIIISEPM 125 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-CS-SCEEEEEECCC
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC-CC-CceeEEEEeCc
Confidence 46779999999999999999998767999999996 888888887532 47999999999876 44 57999999998
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEE
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 158 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~ 158 (252)
++|+ ..+.....+.+++++|+|||.+++.
T Consensus 126 ~~~~-----~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 126 GYML-----FNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp BTTB-----TTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hhcC-----ChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 8887 4466777888999999999999854
No 140
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.53 E-value=1.2e-13 Score=114.39 Aligned_cols=114 Identities=16% Similarity=0.144 Sum_probs=89.1
Q ss_pred hHHHHHhhC--CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeC-CHHHHHHHHHhh-----cCC-------CCCeEEEc
Q 025475 39 LRPFVRKYI--PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDI-SSVAIDMMKMKY-----EEI-------PQLKYLQM 103 (252)
Q Consensus 39 l~~~~~~~~--~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~-s~~~i~~a~~~~-----~~~-------~~v~~~~~ 103 (252)
+.+.+.... .++.+|||+|||+|.++..++..+..+|+++|+ ++.+++.++++. ... +++++...
T Consensus 67 l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~ 146 (281)
T 3bzb_A 67 LADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPY 146 (281)
T ss_dssp HHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEEC
T ss_pred HHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEe
Confidence 444444432 466799999999999999999987668999999 899999999987 322 25777766
Q ss_pred cccCCC-CC----CCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHccc---C--CcEEEEEE
Q 025475 104 DVRDMS-FF----EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLK---P--GGIYMLIT 159 (252)
Q Consensus 104 d~~~~~-~~----~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~---~--gG~l~i~~ 159 (252)
+..+.. .+ ..++||+|++..+++|. .+...+++.+.++|+ | ||.++++.
T Consensus 147 ~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~-------~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 147 RWGDSPDSLQRCTGLQRFQVVLLADLLSFH-------QAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp CTTSCTHHHHHHHSCSSBSEEEEESCCSCG-------GGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred cCCCccHHHHhhccCCCCCEEEEeCcccCh-------HHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 654431 11 35789999999999988 889999999999999 9 99877654
No 141
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.53 E-value=2.1e-15 Score=119.25 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=69.2
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCCCCC-----CCeeEEE
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFED-----ESFDAVI 120 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~~~~-----~~~D~v~ 120 (252)
.++.+|||+|||+|.++..+++.+ ..+++++|+++.+++.+++++...+ +++++++|+.+. +.+ ++||+|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEW--LIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHH--HHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhh--hhhhhhccCcccEEE
Confidence 567799999999999999999985 4489999999999999999886533 688889998873 444 7899999
Q ss_pred eccchhhhcCC-------------------CCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 121 DKGTLDSLMCG-------------------TNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 121 ~~~~l~~~~~~-------------------~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
++.++++.... .........+++++.++|+|||++++.+.
T Consensus 107 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 107 SNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp ECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred ECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 98776543000 00011127888999999999999555443
No 142
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.52 E-value=3.8e-14 Score=113.40 Aligned_cols=102 Identities=19% Similarity=0.231 Sum_probs=85.0
Q ss_pred hCCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcC-------CCCCeEEEccccCCCCCCCCCe
Q 025475 46 YIPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEE-------IPQLKYLQMDVRDMSFFEDESF 116 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~ 116 (252)
.+.++.+|||+|||+|..+..+++. + ..+++++|+++.+++.+++++.. ..+++++++|+.... ...++|
T Consensus 74 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~f 152 (226)
T 1i1n_A 74 QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY-AEEAPY 152 (226)
T ss_dssp TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC-GGGCCE
T ss_pred hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc-ccCCCc
Confidence 3567789999999999999999887 3 24999999999999999988754 347899999998654 446689
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
|+|++..+++++ ++++.++|+|||.+++....
T Consensus 153 D~i~~~~~~~~~-------------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 153 DAIHVGAAAPVV-------------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEEECSBBSSC-------------CHHHHHTEEEEEEEEEEESC
T ss_pred CEEEECCchHHH-------------HHHHHHhcCCCcEEEEEEec
Confidence 999999888776 35788999999999998754
No 143
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.52 E-value=1.6e-13 Score=108.12 Aligned_cols=109 Identities=17% Similarity=0.259 Sum_probs=87.9
Q ss_pred CCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCCCCCCCCCeeEEEeccch
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFFEDESFDAVIDKGTL 125 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l 125 (252)
++.+|||+|||+|..+..++.. +..+++++|+++.+++.++++.... .+++++++|+.+.+ +.++||+|+++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~i~~~~-- 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--SEPPFDGVISRA-- 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC--CCSCEEEEECSC--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC--ccCCcCEEEEec--
Confidence 4679999999999999999986 3459999999999999999987543 35899999998875 456899999753
Q ss_pred hhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhhhhhhc
Q 025475 126 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHL 170 (252)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~ 170 (252)
+ .+...+++.+.++|+|||.+++............+
T Consensus 141 --~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~ 176 (207)
T 1jsx_A 141 --F-------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALL 176 (207)
T ss_dssp --S-------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTS
T ss_pred --c-------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHH
Confidence 2 45678999999999999999987654444444444
No 144
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.52 E-value=1.9e-13 Score=109.61 Aligned_cols=120 Identities=17% Similarity=0.156 Sum_probs=85.0
Q ss_pred eeeccchhhHHHHHhh-----CCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEc
Q 025475 31 DWYQRYSALRPFVRKY-----IPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM 103 (252)
Q Consensus 31 ~~~~~~~~l~~~~~~~-----~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~ 103 (252)
.|-...+.+...+... +.++.+|||+|||+|..+..+++. + .++|+++|+++.+++.+.+......++.++++
T Consensus 53 ~w~~~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~ 132 (232)
T 3id6_C 53 EWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLA 132 (232)
T ss_dssp ECCTTTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEEC
T ss_pred hhchHHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEc
Confidence 3433334444444333 457889999999999999999886 3 56999999999987555444433368999999
Q ss_pred cccCCCC--CCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 104 DVRDMSF--FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 104 d~~~~~~--~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+..... ...++||+|+++.+. +.....+...+.++|||||.++++.
T Consensus 133 Da~~~~~~~~~~~~~D~I~~d~a~---------~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 133 DARFPQSYKSVVENVDVLYVDIAQ---------PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp CTTCGGGTTTTCCCEEEEEECCCC---------TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccchhhhccccceEEEEecCCC---------hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 9986531 224689999987542 1344445566777999999999875
No 145
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.52 E-value=8.5e-14 Score=119.09 Aligned_cols=107 Identities=16% Similarity=0.204 Sum_probs=90.6
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
+++.+|||+|||+|.++..+++.+ ..+++++|+ +.+++.+++++... ++++++++|+.+. ++. .||+|++..
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~-~~D~v~~~~ 257 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP--LPR-KADAIILSF 257 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC--CSS-CEEEEEEES
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC--CCC-CccEEEEcc
Confidence 456799999999999999999875 458999999 99999999987432 2799999999863 333 499999999
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC-Ch
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG-DP 163 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~-~~ 163 (252)
++||+ ++++..+++++++++|+|||.+++.+.. .+
T Consensus 258 vl~~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 293 (360)
T 1tw3_A 258 VLLNW-----PDHDAVRILTRCAEALEPGGRILIHERDDLH 293 (360)
T ss_dssp CGGGS-----CHHHHHHHHHHHHHTEEEEEEEEEEECCBCG
T ss_pred cccCC-----CHHHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 99999 6666689999999999999999999876 44
No 146
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.52 E-value=3.9e-14 Score=115.24 Aligned_cols=108 Identities=12% Similarity=0.114 Sum_probs=86.6
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCC--CCCCCeeEEEec
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSF--FEDESFDAVIDK 122 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~--~~~~~~D~v~~~ 122 (252)
.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++... ..+++++++|+.+++. ...++||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 35679999999999999999876 356999999999999999998753 3469999999988752 124789999986
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhhh
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKAR 166 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~ 166 (252)
.+ .+...+++.+.++|+|||++++.....+...
T Consensus 159 a~-----------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e 191 (249)
T 3g89_A 159 AV-----------APLCVLSELLLPFLEVGGAAVAMKGPRVEEE 191 (249)
T ss_dssp SS-----------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHH
T ss_pred Cc-----------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHH
Confidence 42 4557889999999999999988764433333
No 147
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.51 E-value=2e-13 Score=108.89 Aligned_cols=124 Identities=15% Similarity=0.090 Sum_probs=99.7
Q ss_pred hhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCC---CCeEEEccccCCCCCC
Q 025475 37 SALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIP---QLKYLQMDVRDMSFFE 112 (252)
Q Consensus 37 ~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~---~v~~~~~d~~~~~~~~ 112 (252)
+.-.+.+...++++.+|+|+|||+|.++..++..+ ..+|+++|+++.+++.|+++++..+ ++++.++|..+.. .+
T Consensus 9 s~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~-~~ 87 (230)
T 3lec_A 9 SKRLQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF-EE 87 (230)
T ss_dssp CHHHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-CG
T ss_pred HHHHHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc-cc
Confidence 34456778888889999999999999999999987 5589999999999999999986432 6999999998875 33
Q ss_pred CCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhhhhhhc
Q 025475 113 DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHL 170 (252)
Q Consensus 113 ~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~ 170 (252)
.++||+|++.+..- .-...++....+.|+++|.++++.......-..++
T Consensus 88 ~~~~D~IviaGmGg---------~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L 136 (230)
T 3lec_A 88 ADNIDTITICGMGG---------RLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWL 136 (230)
T ss_dssp GGCCCEEEEEEECH---------HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHH
T ss_pred ccccCEEEEeCCch---------HHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHH
Confidence 34799988765432 34677899999999999999998876655444444
No 148
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.51 E-value=1.5e-13 Score=112.70 Aligned_cols=107 Identities=26% Similarity=0.435 Sum_probs=87.5
Q ss_pred hHHHHHhhC-CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCe
Q 025475 39 LRPFVRKYI-PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESF 116 (252)
Q Consensus 39 l~~~~~~~~-~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 116 (252)
+...+...+ .++.+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++. +++.++++|+.+++ +.+++|
T Consensus 74 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~~~~~f 149 (269)
T 1p91_A 74 IVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---PQVTFCVASSHRLP-FSDTSM 149 (269)
T ss_dssp HHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---TTSEEEECCTTSCS-BCTTCE
T ss_pred HHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---CCcEEEEcchhhCC-CCCCce
Confidence 444555544 567799999999999999999872 348999999999999999875 46899999999887 777899
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
|+|++..+. ..++++.++|+|||.+++.++...
T Consensus 150 D~v~~~~~~--------------~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 150 DAIIRIYAP--------------CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp EEEEEESCC--------------CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred eEEEEeCCh--------------hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 999986441 247889999999999999886643
No 149
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.51 E-value=2.5e-13 Score=108.73 Aligned_cols=103 Identities=18% Similarity=0.208 Sum_probs=83.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC--CCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF--FEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~--~~~~~~D~v~~~ 122 (252)
+.++.+|||+|||+|.++..+++. + ..+++++|+++.+++.++++....++++++++|+.+... ...++||+|++.
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 346779999999999999999977 3 369999999999999999988766789999999987421 123589999976
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEE
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 158 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~ 158 (252)
.+ .+.....++.++.++|+|||.+++.
T Consensus 151 ~~---------~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 151 VA---------QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CC---------STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CC---------CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 44 1234456699999999999999887
No 150
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.51 E-value=7.6e-14 Score=113.28 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=82.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhc----------CCCCCeEEEccccCC-CC-CCC
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYE----------EIPQLKYLQMDVRDM-SF-FED 113 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~----------~~~~v~~~~~d~~~~-~~-~~~ 113 (252)
++++.+|||+|||+|.++..++..+ ..+++|+|+|+.+++.+++++. ...+++++++|+.+. +. +..
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 3466799999999999999999986 4489999999999999988763 335899999999873 21 456
Q ss_pred CCeeEEEeccchhhhcCCCCChhh--------HHHHHHHHHHcccCCcEEEEEEc
Q 025475 114 ESFDAVIDKGTLDSLMCGTNAPIS--------ASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~~~~~~~~~~--------~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+++|.|++...-- .... ...+++++.++|+|||.+++.+.
T Consensus 127 ~~~d~v~~~~p~p-------~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 127 GQLSKMFFCFPDP-------HFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp TCEEEEEEESCCC-------C------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cccCEEEEECCCc-------ccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 7899998542211 1011 15799999999999999998663
No 151
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.51 E-value=6.3e-14 Score=113.96 Aligned_cols=112 Identities=10% Similarity=0.110 Sum_probs=85.8
Q ss_pred CCCcEEEEcccCcHhHHHHHHc--C-CCcEEEEeCCHHHHHHHHHhhcCC---C---C----------------------
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD--G-YEDIVNIDISSVAIDMMKMKYEEI---P---Q---------------------- 97 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~--~-~~~v~~vD~s~~~i~~a~~~~~~~---~---~---------------------- 97 (252)
++.+|||+|||+|.++..++.. . ..+++|+|+|+.+++.|+.++... + +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4569999999999999999876 2 348999999999999999876543 1 1
Q ss_pred ---Ce-------------EEEccccCCCCC----CCCCeeEEEeccchhhhcCC--CCChhhHHHHHHHHHHcccCCcEE
Q 025475 98 ---LK-------------YLQMDVRDMSFF----EDESFDAVIDKGTLDSLMCG--TNAPISASQMLGEVSRLLKPGGIY 155 (252)
Q Consensus 98 ---v~-------------~~~~d~~~~~~~----~~~~~D~v~~~~~l~~~~~~--~~~~~~~~~~l~~~~~~L~~gG~l 155 (252)
++ ++++|+.+.... ...+||+|+++.++.+.... .........++++++++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 56 999998875311 34489999999887764100 011366789999999999999999
Q ss_pred EEEEc
Q 025475 156 MLITY 160 (252)
Q Consensus 156 ~i~~~ 160 (252)
+++..
T Consensus 211 ~~~~~ 215 (250)
T 1o9g_A 211 AVTDR 215 (250)
T ss_dssp EEEES
T ss_pred EEeCc
Confidence 98553
No 152
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.51 E-value=4.2e-14 Score=113.78 Aligned_cols=102 Identities=13% Similarity=0.178 Sum_probs=83.8
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCC-CCCCCeeEEEec
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSF-FEDESFDAVIDK 122 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~-~~~~~~D~v~~~ 122 (252)
.++.+|||+|||+|..+..++... ..+++++|+++.+++.|+++++.. ++++++++|+.+... ..+++||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 356799999999999999999853 569999999999999999988543 379999999987642 225789999976
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.. ......+++++.++|+|||.+++-.
T Consensus 150 ~~----------~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 150 AA----------KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TT----------SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred Cc----------HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 43 2456779999999999999998844
No 153
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.51 E-value=7.8e-14 Score=120.44 Aligned_cols=125 Identities=13% Similarity=0.047 Sum_probs=92.7
Q ss_pred chhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCCCCCC
Q 025475 36 YSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFEDE 114 (252)
Q Consensus 36 ~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~ 114 (252)
.......+....+++.+|||+|||+|.++..++..|. +|+++|+|+.+++.++++++..+ ..++.++|+.+......+
T Consensus 201 qr~~r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~ 279 (393)
T 4dmg_A 201 QRENRRLFEAMVRPGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEG 279 (393)
T ss_dssp GHHHHHHHHTTCCTTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCC
T ss_pred HHHHHHHHHHHhcCCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcC
Confidence 3444566666666688999999999999999999876 49999999999999999885322 346778998875312234
Q ss_pred CeeEEEeccchhhhcCCC----CChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 115 SFDAVIDKGTLDSLMCGT----NAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~----~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
.||+|+++.+...- +. ....+...++..+.++|+|||.+++.++...
T Consensus 280 ~fD~Ii~dpP~f~~--~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 280 PFHHVLLDPPTLVK--RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CEEEEEECCCCCCS--SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCEEEECCCcCCC--CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 49999998664211 00 0014557889999999999999998876644
No 154
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.51 E-value=6.9e-14 Score=118.45 Aligned_cols=106 Identities=11% Similarity=0.141 Sum_probs=90.7
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC---CCCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~---~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
++ .+|||+|||+|..+..+++.. ..+++++|+ +.+++.+++++.. .++++++.+|+.+ + ++ ++||+|++..
T Consensus 167 ~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~-~~~D~v~~~~ 241 (334)
T 2ip2_A 167 RG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E-VP-SNGDIYLLSR 241 (334)
T ss_dssp TT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C-CC-SSCSEEEEES
T ss_pred CC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C-CC-CCCCEEEEch
Confidence 44 799999999999999999873 458999999 9999999988743 2479999999987 3 44 5799999999
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
++||+ +++...+++++++++|+|||++++.+...+
T Consensus 242 vl~~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 242 IIGDL-----DEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp CGGGC-----CHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred hccCC-----CHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 99999 666777999999999999999999986543
No 155
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.51 E-value=6e-14 Score=120.50 Aligned_cols=102 Identities=18% Similarity=0.166 Sum_probs=86.9
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
++..+|||+|||+|.++..+++.. ..+++++|+ +.+++.++.. ++++++.+|+.+ + ++.+ |+|++..++|
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~v~~~~~d~~~-~-~p~~--D~v~~~~vlh 272 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF----SGVEHLGGDMFD-G-VPKG--DAIFIKWICH 272 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----TTEEEEECCTTT-C-CCCC--SEEEEESCGG
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc----CCCEEEecCCCC-C-CCCC--CEEEEechhh
Confidence 456799999999999999999874 458999999 8888776542 579999999987 4 5543 9999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
++ ++++..+++++++++|+|||++++.+...+
T Consensus 273 ~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 273 DW-----SDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp GB-----CHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred cC-----CHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99 777888999999999999999999987644
No 156
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.50 E-value=4.3e-14 Score=112.81 Aligned_cols=106 Identities=14% Similarity=0.161 Sum_probs=86.0
Q ss_pred CCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCC-CCCC----CCCeeE
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDM-SFFE----DESFDA 118 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~-~~~~----~~~~D~ 118 (252)
++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++++... ++++++++|+.+. +... .++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 5679999999999999999985 2 459999999999999999987532 2599999998663 2122 268999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
|++....++. .....++..+ ++|+|||.+++.+...
T Consensus 138 V~~d~~~~~~-------~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 138 VFLDHWKDRY-------LPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp EEECSCGGGH-------HHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEEcCCcccc-------hHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 9999887777 6667788888 9999999999876544
No 157
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.50 E-value=3.3e-14 Score=113.92 Aligned_cols=115 Identities=12% Similarity=0.098 Sum_probs=81.2
Q ss_pred HHhhCCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCC-HHHHHHH---HHhhcC--CCCCeEEEccccCCCCCCCCC
Q 025475 43 VRKYIPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDIS-SVAIDMM---KMKYEE--IPQLKYLQMDVRDMSFFEDES 115 (252)
Q Consensus 43 ~~~~~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s-~~~i~~a---~~~~~~--~~~v~~~~~d~~~~~~~~~~~ 115 (252)
+.....++.+|||+|||+|.++..++... ..+|+|+|+| +.|++.| +++... .+++.++++|+.+++....+.
T Consensus 18 ~~~~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~ 97 (225)
T 3p2e_A 18 TEIIGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNI 97 (225)
T ss_dssp HHHHTTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTC
T ss_pred HHHhCCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCe
Confidence 33344567799999999999999998653 4589999999 7777776 665533 347999999999886222356
Q ss_pred eeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 116 FDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 116 ~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+|.|+++..+.+... ....+...++++++++|||||.+++..
T Consensus 98 v~~i~~~~~~~~~~~--~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 98 ADSISILFPWGTLLE--YVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EEEEEEESCCHHHHH--HHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEEEeCCCcHHhh--hhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 777777654332100 000123568999999999999998844
No 158
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.50 E-value=1.1e-13 Score=111.59 Aligned_cols=101 Identities=16% Similarity=0.216 Sum_probs=82.2
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCC-CCCeeEEEecc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFE-DESFDAVIDKG 123 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~-~~~~D~v~~~~ 123 (252)
..++.+|||+|||+|.++..+++.+..+++++|+++.+++.+++++.. ..+++++++|+.. + ++ ..+||+|++..
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~-~~~~~~fD~Ii~~~ 166 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK-G-FPPKAPYDVIIVTA 166 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-C-CGGGCCEEEEEECS
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc-C-CCCCCCccEEEECC
Confidence 456779999999999999999987425999999999999999998753 2468999999733 2 33 34599999999
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+++++ . +++.++|+|||.+++.....
T Consensus 167 ~~~~~-------~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 167 GAPKI-------P------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp BBSSC-------C------HHHHHTEEEEEEEEEEECSS
T ss_pred cHHHH-------H------HHHHHhcCCCcEEEEEEecC
Confidence 98887 2 36889999999999987544
No 159
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.50 E-value=3.5e-13 Score=108.39 Aligned_cols=124 Identities=13% Similarity=0.031 Sum_probs=98.9
Q ss_pred hhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCC---CCeEEEccccCCCCCC
Q 025475 37 SALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIP---QLKYLQMDVRDMSFFE 112 (252)
Q Consensus 37 ~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~---~v~~~~~d~~~~~~~~ 112 (252)
+.-.+.+...++++.+|||+|||+|.++..++..+ ..+++++|+++.+++.|+++++..+ ++++.++|..+.. .+
T Consensus 9 s~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~-~~ 87 (244)
T 3gnl_A 9 SKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI-EK 87 (244)
T ss_dssp CHHHHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-CG
T ss_pred hHHHHHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhcc-Cc
Confidence 34456778888989999999999999999999987 5589999999999999999985432 5899999998865 33
Q ss_pred CCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhhhhhhc
Q 025475 113 DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHL 170 (252)
Q Consensus 113 ~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~ 170 (252)
..+||+|++.+..- .-...++....+.|+++|.++++.......-..++
T Consensus 88 ~~~~D~IviagmGg---------~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L 136 (244)
T 3gnl_A 88 KDAIDTIVIAGMGG---------TLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWS 136 (244)
T ss_dssp GGCCCEEEEEEECH---------HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHH
T ss_pred cccccEEEEeCCch---------HHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHH
Confidence 33699998755422 44677899999999999999998876655444444
No 160
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.49 E-value=7.9e-14 Score=119.58 Aligned_cols=102 Identities=17% Similarity=0.139 Sum_probs=87.3
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
++..+|||+|||+|.++..+++.. ..+++++|+ +.+++.++.. ++++++.+|+.+ + ++.+ |+|++..++|
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~v~~~~~D~~~-~-~p~~--D~v~~~~vlh 270 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF----PGVTHVGGDMFK-E-VPSG--DTILMKWILH 270 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----TTEEEEECCTTT-C-CCCC--SEEEEESCGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc----CCeEEEeCCcCC-C-CCCC--CEEEehHHhc
Confidence 456799999999999999999873 458999999 8888776542 589999999988 4 5544 9999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
++ ++++..+++++++++|+|||++++.+...+
T Consensus 271 ~~-----~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 271 DW-----SDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp GS-----CHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred cC-----CHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99 778889999999999999999999987543
No 161
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.49 E-value=3e-14 Score=113.37 Aligned_cols=104 Identities=18% Similarity=0.255 Sum_probs=80.6
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHH----hh--cCCCCCeEEEccccCCCCCCCCCeeEE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKM----KY--EEIPQLKYLQMDVRDMSFFEDESFDAV 119 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~----~~--~~~~~v~~~~~d~~~~~~~~~~~~D~v 119 (252)
..++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.|++.+.+ +. ...++++++++|+.+++ +.+++ |.|
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~-d~v 102 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP-PLSGV-GEL 102 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC-SCCCE-EEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC-CCCCC-CEE
Confidence 4567799999999999999999984 4699999999998885332 22 12347999999999987 66555 766
Q ss_pred Eecc---ch--hhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 120 IDKG---TL--DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 120 ~~~~---~l--~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
++.. .+ +|+ .+...++++++++|||||.+++..
T Consensus 103 ~~~~~~~~~~~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 103 HVLMPWGSLLRGVL-------GSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEESCCHHHHHHHH-------TSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEccchhhhhhhh-------ccHHHHHHHHHHHcCCCcEEEEEe
Confidence 6333 22 255 566899999999999999999854
No 162
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.49 E-value=4.1e-14 Score=119.69 Aligned_cols=113 Identities=14% Similarity=0.093 Sum_probs=85.9
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CC--CCeEEEccccCCCCC---CCCCeeEEE
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IP--QLKYLQMDVRDMSFF---EDESFDAVI 120 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~--~v~~~~~d~~~~~~~---~~~~~D~v~ 120 (252)
.++.+|||+|||+|.++..++..|. +|+++|+|+.+++.+++++.. .. +++++++|+.++... ..++||+|+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 3567999999999999999999877 999999999999999998753 22 489999999876311 146899999
Q ss_pred eccchhhhcCC---CCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 121 DKGTLDSLMCG---TNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 121 ~~~~l~~~~~~---~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
++.+....... .....+...+++++.++|+|||.+++....
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 97653221000 001256789999999999999997776543
No 163
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.49 E-value=4.5e-13 Score=106.67 Aligned_cols=122 Identities=13% Similarity=0.089 Sum_probs=95.5
Q ss_pred hHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCC---CCeEEEccccCCCCCCCC
Q 025475 39 LRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIP---QLKYLQMDVRDMSFFEDE 114 (252)
Q Consensus 39 l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~---~v~~~~~d~~~~~~~~~~ 114 (252)
-.+.+...++++.+|+|+|||+|.++..++..+ ..+|+++|+++.+++.|+++.+..+ ++++.++|..+.. .+.+
T Consensus 5 RL~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l-~~~~ 83 (225)
T 3kr9_A 5 RLELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAF-EETD 83 (225)
T ss_dssp HHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-CGGG
T ss_pred HHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhc-ccCc
Confidence 355677778888999999999999999999986 5589999999999999999985432 6899999987542 1223
Q ss_pred CeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhhhhhhc
Q 025475 115 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHL 170 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~ 170 (252)
+||+|+..+.- ......++..+.+.|+++|++++........-..++
T Consensus 84 ~~D~IviaG~G---------g~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L 130 (225)
T 3kr9_A 84 QVSVITIAGMG---------GRLIARILEEGLGKLANVERLILQPNNREDDLRIWL 130 (225)
T ss_dssp CCCEEEEEEEC---------HHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHH
T ss_pred CCCEEEEcCCC---------hHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHH
Confidence 69999875542 234688899999999999999998775544444444
No 164
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.49 E-value=2e-13 Score=107.10 Aligned_cols=97 Identities=21% Similarity=0.262 Sum_probs=76.3
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
.++.+|||+|||+|.++..++..+..+++++|+++.+++.++++.. +++++++|+.+++ ++||+|+++.++++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~~~~d~~~~~----~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG---GVNFMVADVSEIS----GKYDTWIMNPPFGS 122 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT---TSEEEECCGGGCC----CCEEEEEECCCC--
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC---CCEEEECcHHHCC----CCeeEEEECCCchh
Confidence 3667999999999999999998876579999999999999999875 7899999998864 58999999999998
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEE
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLI 158 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~ 158 (252)
. .......+++++.+++ |+.+++.
T Consensus 123 ~-----~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 123 V-----VKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp ----------CHHHHHHHHHHE--EEEEEEE
T ss_pred c-----cCchhHHHHHHHHHhc--CcEEEEE
Confidence 8 3333457889999988 4433333
No 165
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.49 E-value=1.4e-13 Score=115.20 Aligned_cols=109 Identities=23% Similarity=0.299 Sum_probs=84.4
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhc------CCCCCeEEEccccCCCCC-CCCCeeEE
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYE------EIPQLKYLQMDVRDMSFF-EDESFDAV 119 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~------~~~~v~~~~~d~~~~~~~-~~~~~D~v 119 (252)
+++.+|||+|||+|..+..+++.. ..+++++|+++.+++.+++++. ..++++++++|+.+.... .+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 566799999999999999999873 5699999999999999999872 235799999999876411 46789999
Q ss_pred EeccchhhhcCCCCChhhH--HHHHHHHHHcccCCcEEEEEEcC
Q 025475 120 IDKGTLDSLMCGTNAPISA--SQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~--~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+++.+.++. +.... ..++++++++|+|||.+++....
T Consensus 174 i~d~~~~~~-----~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 174 IIDTTDPAG-----PASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEECC--------------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECCCCccc-----cchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 997665443 11222 68899999999999999987643
No 166
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.48 E-value=1.5e-13 Score=115.77 Aligned_cols=100 Identities=19% Similarity=0.162 Sum_probs=84.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCC--CcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGY--EDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~--~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
+.++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.+++++.. .++++++++|+.+.. ...++||+|++.
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~Iv~~ 151 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-PEFSPYDVIFVT 151 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEEC
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc-ccCCCeEEEEEc
Confidence 35777999999999999999998742 4599999999999999998753 346999999998865 345789999999
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
.+++|+ . +.+.++|+|||.+++...
T Consensus 152 ~~~~~~-------~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 152 VGVDEV-------P------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp SBBSCC-------C------HHHHHHEEEEEEEEEEBC
T ss_pred CCHHHH-------H------HHHHHhcCCCcEEEEEEC
Confidence 999998 2 567889999999998863
No 167
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.48 E-value=7.4e-14 Score=111.75 Aligned_cols=108 Identities=15% Similarity=0.170 Sum_probs=86.1
Q ss_pred HHHHhhCCCCCcEEEEcccCcHhHHHHHHcCC------CcEEEEeCCHHHHHHHHHhhcC-------CCCCeEEEccccC
Q 025475 41 PFVRKYIPTSSRVLMVGCGNALMSEDMVKDGY------EDIVNIDISSVAIDMMKMKYEE-------IPQLKYLQMDVRD 107 (252)
Q Consensus 41 ~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~------~~v~~vD~s~~~i~~a~~~~~~-------~~~v~~~~~d~~~ 107 (252)
+.+...+.++.+|||+|||+|.++..+++... .+++++|+++.+++.+++++.. ..+++++++|+.+
T Consensus 72 ~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 151 (227)
T 2pbf_A 72 KRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQ 151 (227)
T ss_dssp HHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGG
T ss_pred HHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHh
Confidence 33433456788999999999999999998742 4899999999999999998743 3478999999887
Q ss_pred CCC---CCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 108 MSF---FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 108 ~~~---~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
... ...++||+|++..+++++ ++++.++|+|||.+++....
T Consensus 152 ~~~~~~~~~~~fD~I~~~~~~~~~-------------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 152 VNEEEKKELGLFDAIHVGASASEL-------------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCHHHHHHHCCEEEEEECSBBSSC-------------CHHHHHHEEEEEEEEEEEEE
T ss_pred cccccCccCCCcCEEEECCchHHH-------------HHHHHHhcCCCcEEEEEEcc
Confidence 420 134679999999888876 37788999999999987743
No 168
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.48 E-value=1.2e-13 Score=122.35 Aligned_cols=102 Identities=20% Similarity=0.234 Sum_probs=86.7
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
.++.+|||+|||+|.++..+++.+..+|+++|+|+ +++.|++++... ++++++++|+.+.+ ++ ++||+|+++.+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~-~~-~~fD~Ivs~~~ 233 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LP-EQVDIIISEPM 233 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-CS-SCEEEEECCCC
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc-cC-CCeEEEEEeCc
Confidence 35679999999999999999998767999999998 999999887532 47999999999875 43 58999999988
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEE
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYML 157 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i 157 (252)
++|+ ..+.....+.+++++|+|||.+++
T Consensus 234 ~~~~-----~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 234 GYML-----FNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHH-----TCHHHHHHHHHGGGGEEEEEEEES
T ss_pred hHhc-----CcHHHHHHHHHHHHhcCCCCEEEE
Confidence 8887 556667788899999999999885
No 169
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.47 E-value=1.2e-13 Score=118.25 Aligned_cols=101 Identities=20% Similarity=0.238 Sum_probs=82.4
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccch
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTL 125 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l 125 (252)
++.+|||+|||+|.++..+++.|..+|++||.|+ +++.|++.++.+ .+|++++++++++. ++ +++|+|++...-
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~-lp-e~~DvivsE~~~ 159 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE-LP-EQVDAIVSEWMG 159 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC-CS-SCEEEEECCCCB
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec-CC-ccccEEEeeccc
Confidence 5779999999999999999999988999999996 888888877532 36999999999986 44 689999985543
Q ss_pred hhhcCCCCChhhHHHHHHHHHHcccCCcEEE
Q 025475 126 DSLMCGTNAPISASQMLGEVSRLLKPGGIYM 156 (252)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 156 (252)
+.+ ........++....++|+|||.++
T Consensus 160 ~~l----~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 160 YGL----LHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TTB----TTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ccc----cccchhhhHHHHHHhhCCCCceEC
Confidence 322 222578888998999999999865
No 170
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=1.6e-13 Score=113.08 Aligned_cols=107 Identities=14% Similarity=0.081 Sum_probs=88.4
Q ss_pred HHhhCCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCCCCCCCCCeeEE
Q 025475 43 VRKYIPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFFEDESFDAV 119 (252)
Q Consensus 43 ~~~~~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~~D~v 119 (252)
+...+.++.+|||+|||+|.++..++..+ ..+|+++|+++.+++.++++++.. .++.++++|+.+.+ . .++||+|
T Consensus 113 ~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~-~-~~~~D~V 190 (272)
T 3a27_A 113 MAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVE-L-KDVADRV 190 (272)
T ss_dssp HHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCC-C-TTCEEEE
T ss_pred HHHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcC-c-cCCceEE
Confidence 34446778899999999999999999983 559999999999999999988543 47889999998874 4 5689999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+++.+. ....++.++.+.|+|||.+++..+..
T Consensus 191 i~d~p~-----------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 191 IMGYVH-----------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EECCCS-----------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EECCcc-----------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 987543 34567888999999999999887643
No 171
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.47 E-value=1.3e-13 Score=112.37 Aligned_cols=103 Identities=14% Similarity=0.230 Sum_probs=87.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcC---CCCCeEEEccccCCCCCCCCCeeEEEe
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSFFEDESFDAVID 121 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~---~~~v~~~~~d~~~~~~~~~~~~D~v~~ 121 (252)
+.++.+|||+|||+|.++..+++. + ..+++++|+++.+++.+++++.. .+++++.++|+.+.+ +++++||+|++
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~-~~~~~~D~v~~ 172 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE-LEEAAYDGVAL 172 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC-CCTTCEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC-CCCCCcCEEEE
Confidence 457779999999999999999987 4 46999999999999999998743 357999999998875 66778999997
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+ . .+...+++++.++|+|||.+++.....
T Consensus 173 ~-----~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 173 D-----L-------MEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp E-----S-------SCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred C-----C-------cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 3 3 445678999999999999999988654
No 172
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.47 E-value=7.1e-14 Score=120.22 Aligned_cols=100 Identities=18% Similarity=0.195 Sum_probs=84.9
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
+++.+|||+|||+|.++..+++.+ ..+++++|+ +.+++.+++. ++++++++|+.+ + ++. ||+|++..++|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~v~~~~~d~~~-~-~~~--~D~v~~~~~lh 278 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----SGIEHVGGDMFA-S-VPQ--GDAMILKAVCH 278 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----TTEEEEECCTTT-C-CCC--EEEEEEESSGG
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----CCCEEEeCCccc-C-CCC--CCEEEEecccc
Confidence 456799999999999999999885 458899999 9998877642 579999999987 4 453 99999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
|+ ++.....++++++++|+|||.+++.+..
T Consensus 279 ~~-----~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 279 NW-----SDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp GS-----CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cC-----CHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 99 5555569999999999999999998754
No 173
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.47 E-value=1.4e-13 Score=119.30 Aligned_cols=130 Identities=18% Similarity=0.131 Sum_probs=96.3
Q ss_pred eccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC---CCeEEEccccCCC
Q 025475 33 YQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP---QLKYLQMDVRDMS 109 (252)
Q Consensus 33 ~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~---~v~~~~~d~~~~~ 109 (252)
+.........+.....++.+|||+|||+|.++..++..|..+|+++|+++.+++.+++++...+ +++++++|+.+..
T Consensus 201 f~~~~~~~~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~ 280 (396)
T 2as0_A 201 FLDQRENRLALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEM 280 (396)
T ss_dssp CSTTHHHHHHHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred cCCHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHH
Confidence 3333334555655554778999999999999999999876699999999999999999985432 6899999998753
Q ss_pred C-C--CCCCeeEEEeccchhhhcCC--CCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 110 F-F--EDESFDAVIDKGTLDSLMCG--TNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 110 ~-~--~~~~~D~v~~~~~l~~~~~~--~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
. . ...+||+|+++.+....... .........++.++.++|+|||.++++++..
T Consensus 281 ~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 281 EKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp HHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred HHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 1 1 25689999997653221000 0001566788999999999999999888654
No 174
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.47 E-value=8.4e-14 Score=118.93 Aligned_cols=107 Identities=25% Similarity=0.325 Sum_probs=83.6
Q ss_pred hHHHHHhhCCCCCcEEEEccc------CcHhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC
Q 025475 39 LRPFVRKYIPTSSRVLMVGCG------NALMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF 110 (252)
Q Consensus 39 l~~~~~~~~~~~~~vLD~G~G------~G~~~~~l~~~--~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~ 110 (252)
..+++.....++.+|||+||| +|..+..+++. ...+|+++|+|+.|. ...++++++++|+.+++
T Consensus 206 Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~~~~rI~fv~GDa~dlp- 277 (419)
T 3sso_A 206 YDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------VDELRIRTIQGDQNDAE- 277 (419)
T ss_dssp HHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------GCBTTEEEEECCTTCHH-
T ss_pred HHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------hcCCCcEEEEecccccc-
Confidence 444555555567799999999 66666666654 346999999999973 12358999999999876
Q ss_pred CC------CCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 111 FE------DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 111 ~~------~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+. +++||+|+++.. |+. .+..+.+++++++|||||++++.+..
T Consensus 278 f~~~l~~~d~sFDlVisdgs-H~~-------~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 278 FLDRIARRYGPFDIVIDDGS-HIN-------AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHHHHHHHCCEEEEEECSC-CCH-------HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred hhhhhhcccCCccEEEECCc-ccc-------hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 54 578999999754 666 78899999999999999999998753
No 175
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=4.1e-13 Score=103.30 Aligned_cols=101 Identities=17% Similarity=0.217 Sum_probs=83.7
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
..++.+|||+|||+|.++..+++ ...+++++|+++.+++.+++++... ++++++++|+.+ + +++++||+|+++.+
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~-~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V-LDKLEFNKAFIGGT 109 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H-GGGCCCSEEEECSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c-ccCCCCcEEEECCc
Confidence 34667999999999999999998 4559999999999999999988543 478999999987 3 55678999999876
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
.+...+++++.++ |||.+++......
T Consensus 110 -----------~~~~~~l~~~~~~--~gG~l~~~~~~~~ 135 (183)
T 2yxd_A 110 -----------KNIEKIIEILDKK--KINHIVANTIVLE 135 (183)
T ss_dssp -----------SCHHHHHHHHHHT--TCCEEEEEESCHH
T ss_pred -----------ccHHHHHHHHhhC--CCCEEEEEecccc
Confidence 3446788888888 9999999886543
No 176
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.47 E-value=1.8e-13 Score=116.69 Aligned_cols=105 Identities=16% Similarity=0.189 Sum_probs=83.9
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC---CCCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~---~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
++++.+|||+|||+|..+..+++.. ..+++++|+ +.++. +++.+. .++++++.+|+.+. .+ +||+|++.
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~--~p--~~D~v~~~ 254 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLRE--VP--HADVHVLK 254 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTC--CC--CCSEEEEE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCC--CC--CCcEEEEe
Confidence 3466799999999999999999874 458999999 45554 333221 24699999999733 34 89999999
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
.++||+ ++++..+++++++++|+|||++++.+...+
T Consensus 255 ~vlh~~-----~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 255 RILHNW-----GDEDSVRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp SCGGGS-----CHHHHHHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred hhccCC-----CHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 999999 666668999999999999999999886543
No 177
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.47 E-value=1.5e-13 Score=112.98 Aligned_cols=111 Identities=14% Similarity=0.140 Sum_probs=90.3
Q ss_pred hhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCC
Q 025475 37 SALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFED 113 (252)
Q Consensus 37 ~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~ 113 (252)
..-...+...+.++.+|||+|||+|.++..++..|..+|+++|+++.+++.++++++.+ ++++++++|..++. ..
T Consensus 113 ~~er~ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~--~~ 190 (278)
T 3k6r_A 113 VKERVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP--GE 190 (278)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--CC
T ss_pred HHHHHHHHHhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc--cc
Confidence 33455677778899999999999999999999998779999999999999999998542 36899999999885 56
Q ss_pred CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 114 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+.||.|+++.+.. ...++..+.++|++||.+.+.++
T Consensus 191 ~~~D~Vi~~~p~~-----------~~~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 191 NIADRILMGYVVR-----------THEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp SCEEEEEECCCSS-----------GGGGHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCEEEECCCCc-----------HHHHHHHHHHHcCCCCEEEEEee
Confidence 7899999875422 23466777889999999876554
No 178
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.46 E-value=2e-13 Score=118.69 Aligned_cols=108 Identities=10% Similarity=0.042 Sum_probs=83.7
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHH-------HHhhcC----CCCCeEEEccccCCC-CC--
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMM-------KMKYEE----IPQLKYLQMDVRDMS-FF-- 111 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a-------~~~~~~----~~~v~~~~~d~~~~~-~~-- 111 (252)
+.++.+|||+|||+|.++..++.. +..+|+|+|+++.+++.| ++++.. ..+++++++|....+ .+
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccc
Confidence 456779999999999999999986 555899999999999888 776642 247888887644211 01
Q ss_pred CCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 112 EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 112 ~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
..++||+|+++.++ +. ++....++++.++|+|||.+++.+...
T Consensus 320 ~~~~FDvIvvn~~l-~~-------~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 320 LIPQCDVILVNNFL-FD-------EDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp HGGGCSEEEECCTT-CC-------HHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred ccCCCCEEEEeCcc-cc-------ccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 23689999987665 33 677788999999999999999875433
No 179
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.46 E-value=9.6e-14 Score=111.22 Aligned_cols=101 Identities=18% Similarity=0.190 Sum_probs=83.3
Q ss_pred hCCCCCcEEEEcccCcHhHHHHHHc-CC------CcEEEEeCCHHHHHHHHHhhcC-------CCCCeEEEccccCCCCC
Q 025475 46 YIPTSSRVLMVGCGNALMSEDMVKD-GY------EDIVNIDISSVAIDMMKMKYEE-------IPQLKYLQMDVRDMSFF 111 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~G~~~~~l~~~-~~------~~v~~vD~s~~~i~~a~~~~~~-------~~~v~~~~~d~~~~~~~ 111 (252)
.+.++.+|||+|||+|.++..+++. +. .+++++|+++.+++.+++++.. ..+++++++|+.+.. .
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~ 159 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-P 159 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-G
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCC-C
Confidence 3567789999999999999999885 32 4899999999999999988743 347899999998732 2
Q ss_pred CCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 112 EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 112 ~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
..++||+|++..+++++ .+++.++|+|||.+++...
T Consensus 160 ~~~~fD~I~~~~~~~~~-------------~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 160 PNAPYNAIHVGAAAPDT-------------PTELINQLASGGRLIVPVG 195 (227)
T ss_dssp GGCSEEEEEECSCBSSC-------------CHHHHHTEEEEEEEEEEES
T ss_pred cCCCccEEEECCchHHH-------------HHHHHHHhcCCCEEEEEEe
Confidence 23689999999998887 2678999999999998774
No 180
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.46 E-value=2.3e-13 Score=110.62 Aligned_cols=104 Identities=11% Similarity=0.120 Sum_probs=83.8
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCC-CCC-CCCCeeEEE
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDM-SFF-EDESFDAVI 120 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~-~~~-~~~~~D~v~ 120 (252)
.++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++... ++++++++|+.+. +.. ..++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 35679999999999999999987 2 459999999999999999998532 3799999998763 312 234899999
Q ss_pred eccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 121 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+... . .....+++++.++|+|||++++.+..
T Consensus 142 ~d~~---~-------~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 142 IDAD---K-------PNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp ECSC---G-------GGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred ECCc---h-------HHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 8653 2 55677999999999999999886643
No 181
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.46 E-value=4.6e-13 Score=114.40 Aligned_cols=115 Identities=15% Similarity=0.112 Sum_probs=90.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcCCC--CCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEEIP--QLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~a~~~~~~~~--~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
..++.+|||+|||+|.++..++..+ ..+++|+|+++.+++.|+++++..+ +++++++|+.+++ .+...||+|+++
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~-~~~~~~D~Ii~n 279 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP-RFFPEVDRILAN 279 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG-GTCCCCSEEEEC
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc-cccCCCCEEEEC
Confidence 3567799999999999999999863 3589999999999999999986433 7999999999987 556679999998
Q ss_pred cchhhhcCCC-CChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 123 GTLDSLMCGT-NAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 123 ~~l~~~~~~~-~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
.++....... ........+++++.++|+|||.+++.+...
T Consensus 280 pPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 280 PPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp CCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred CCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 8765320000 001234788999999999999999988643
No 182
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.46 E-value=1.5e-13 Score=112.09 Aligned_cols=108 Identities=13% Similarity=0.184 Sum_probs=83.0
Q ss_pred CcEEEEcccC--cHhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCCC--CCeEEEccccCCCC---CC--CCCee--
Q 025475 51 SRVLMVGCGN--ALMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEIP--QLKYLQMDVRDMSF---FE--DESFD-- 117 (252)
Q Consensus 51 ~~vLD~G~G~--G~~~~~l~~~--~~~~v~~vD~s~~~i~~a~~~~~~~~--~v~~~~~d~~~~~~---~~--~~~~D-- 117 (252)
.+|||+|||+ +.++..++.. ...+|+++|.|+.|+..++.++...+ +++++++|+.+... .+ .+.||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~ 159 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLT 159 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcC
Confidence 5899999997 3344444432 34599999999999999999986533 68999999988520 01 23344
Q ss_pred ---EEEeccchhhhcCCCCChhh-HHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 118 ---AVIDKGTLDSLMCGTNAPIS-ASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 118 ---~v~~~~~l~~~~~~~~~~~~-~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
.|+++.+|||+ ++.+ +..+++++++.|+|||+|++++...+
T Consensus 160 ~p~av~~~avLH~l-----~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 160 RPVALTVIAIVHFV-----LDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp SCCEEEEESCGGGS-----CGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred CcchHHhhhhHhcC-----CchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 68899999999 4443 78999999999999999999987654
No 183
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.45 E-value=1.7e-13 Score=116.99 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=85.8
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccch
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 125 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l 125 (252)
+++..+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++. ++++++.+|+.+ + ++ .||+|++..++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~v~~~~~d~~~-~-~p--~~D~v~~~~~l 256 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----NNLTYVGGDMFT-S-IP--NADAVLLKYIL 256 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----TTEEEEECCTTT-C-CC--CCSEEEEESCG
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----CCcEEEeccccC-C-CC--CccEEEeehhh
Confidence 3456799999999999999999873 458999999 9998877652 469999999977 4 44 39999999999
Q ss_pred hhhcCCCCChhhHHHHHHHHHHcccC---CcEEEEEEcCC
Q 025475 126 DSLMCGTNAPISASQMLGEVSRLLKP---GGIYMLITYGD 162 (252)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~~~~~~L~~---gG~l~i~~~~~ 162 (252)
||+ ++....+++++++++|+| ||++++.+...
T Consensus 257 h~~-----~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 257 HNW-----TDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp GGS-----CHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred ccC-----CHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 999 555566999999999999 99999988653
No 184
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.45 E-value=1.1e-13 Score=110.62 Aligned_cols=99 Identities=15% Similarity=0.250 Sum_probs=81.2
Q ss_pred CcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcC--C--CCCeEEEccccCCC-CCCCCCeeEEEecc
Q 025475 51 SRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEE--I--PQLKYLQMDVRDMS-FFEDESFDAVIDKG 123 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~--~--~~v~~~~~d~~~~~-~~~~~~~D~v~~~~ 123 (252)
.+|||+|||+|..+..+++. + ..+++++|+++.+++.|+++++. . ++++++++|+.+.. .+.+++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 49999999999999999985 2 46999999999999999999854 2 36999999987753 13367899999865
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.. .+...+++++.++|+|||.+++-+
T Consensus 138 ~~----------~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 138 SP----------MDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CT----------TTHHHHHHHHHHHEEEEEEEEETT
T ss_pred cH----------HHHHHHHHHHHHHcCCCcEEEEeC
Confidence 32 445678999999999999998844
No 185
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.45 E-value=2.5e-13 Score=112.54 Aligned_cols=109 Identities=17% Similarity=0.219 Sum_probs=86.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC------CCCCeEEEccccCCCCCCCCCeeEE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDMSFFEDESFDAV 119 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~~D~v 119 (252)
.+++.+|||+|||+|..+..+++.. ..+++++|+++.+++.+++++.. .++++++++|+.+......++||+|
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 3566799999999999999999874 56999999999999999998853 3589999999977531235789999
Q ss_pred EeccchhhhcCCCCChhhH--HHHHHHHHHcccCCcEEEEEEc
Q 025475 120 IDKGTLDSLMCGTNAPISA--SQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~--~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+++.+.+.. +.... ..+++.++++|+|||.+++...
T Consensus 156 i~d~~~~~~-----~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 156 IVDSSDPIG-----PAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEECCCTTT-----GGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEcCCCCCC-----cchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 996543322 22233 7899999999999999998753
No 186
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.45 E-value=2.1e-13 Score=114.56 Aligned_cols=111 Identities=25% Similarity=0.281 Sum_probs=86.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC-------CCCCeEEEccccCCCCCCCCCeeE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE-------IPQLKYLQMDVRDMSFFEDESFDA 118 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~D~ 118 (252)
.+.+.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++.. .++++++++|+.+......++||+
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 355679999999999999999987 356899999999999999998742 358999999998742134678999
Q ss_pred EEeccchhhhcCCCCChhh--HHHHHHHHHHcccCCcEEEEEE
Q 025475 119 VIDKGTLDSLMCGTNAPIS--ASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~--~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+++...+....+ +... ...++++++++|+|||.+++..
T Consensus 155 Ii~d~~~~~~~~~--~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 155 VIIDLTDPVGEDN--PARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEECCCCBSTTC--GGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCcccccC--cchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 9998655430000 1122 4789999999999999999864
No 187
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.45 E-value=2.2e-13 Score=117.61 Aligned_cols=126 Identities=13% Similarity=0.071 Sum_probs=93.6
Q ss_pred hhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--C--CCeEEEccccCCCC-C-
Q 025475 38 ALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--P--QLKYLQMDVRDMSF-F- 111 (252)
Q Consensus 38 ~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~--~--~v~~~~~d~~~~~~-~- 111 (252)
....++...+.++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|+++++.. . +++++++|+.+... .
T Consensus 201 ~~~~~~~~~~~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~ 280 (385)
T 2b78_A 201 QVRNELINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYAR 280 (385)
T ss_dssp HHHHHHHHTTTBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHH
Confidence 3345555544667899999999999999999987668999999999999999988532 2 78999999977421 1
Q ss_pred -CCCCeeEEEeccchhhh--cCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 112 -EDESFDAVIDKGTLDSL--MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 112 -~~~~~D~v~~~~~l~~~--~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
...+||+|+++.+.... ............++..+.++|+|||.+++......
T Consensus 281 ~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 281 RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 24589999998764210 00111224567788999999999999998886543
No 188
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.44 E-value=3e-13 Score=113.95 Aligned_cols=109 Identities=17% Similarity=0.255 Sum_probs=85.3
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC------CCCCeEEEccccCCCCCCCCCeeEE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDMSFFEDESFDAV 119 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~~D~v 119 (252)
.+.+.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++.. .++++++++|+.+.....+++||+|
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 345679999999999999999987 356999999999999999998754 3579999999877421235689999
Q ss_pred EeccchhhhcCCCCChhhH--HHHHHHHHHcccCCcEEEEEEc
Q 025475 120 IDKGTLDSLMCGTNAPISA--SQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~--~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+++..- ++ .+.... ..+++++.++|+|||.+++...
T Consensus 194 i~d~~~-p~----~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 194 IVDSSD-PI----GPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EEECCC-SS----SGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCcC-CC----CcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 987531 11 011222 7899999999999999998653
No 189
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.44 E-value=1.3e-13 Score=113.89 Aligned_cols=107 Identities=13% Similarity=0.188 Sum_probs=78.8
Q ss_pred hHHHHHhh-C-CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCe-EEEccccCCC--CCCC
Q 025475 39 LRPFVRKY-I-PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLK-YLQMDVRDMS--FFED 113 (252)
Q Consensus 39 l~~~~~~~-~-~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~-~~~~d~~~~~--~~~~ 113 (252)
+...+... + .++.+|||+|||||.++..+++.|..+|+|+|+|+.|++.+.++. +++. +...|+..+. .++.
T Consensus 73 l~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~---~rv~~~~~~ni~~l~~~~l~~ 149 (291)
T 3hp7_A 73 LEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD---DRVRSMEQYNFRYAEPVDFTE 149 (291)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC---TTEEEECSCCGGGCCGGGCTT
T ss_pred HHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---cccceecccCceecchhhCCC
Confidence 44555544 2 256699999999999999999998779999999999998855432 2222 2233444432 1334
Q ss_pred CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEE
Q 025475 114 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 158 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~ 158 (252)
.+||+|++..+++++ ..++.+++++|+|||.+++.
T Consensus 150 ~~fD~v~~d~sf~sl----------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 150 GLPSFASIDVSFISL----------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CCCSEEEECCSSSCG----------GGTHHHHHHHSCTTCEEEEE
T ss_pred CCCCEEEEEeeHhhH----------HHHHHHHHHHcCcCCEEEEE
Confidence 469999998776655 67899999999999999886
No 190
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.44 E-value=5.8e-13 Score=111.97 Aligned_cols=114 Identities=11% Similarity=0.081 Sum_probs=87.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
..++.+|||+|||+|..+..+++.. ..+++++|+++.+++.+++++.. ..+++++++|+.+++ ...++||+|+++
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~-~~~~~fD~Il~d 194 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG-ELNVEFDKILLD 194 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG-GGCCCEEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcc-cccccCCEEEEe
Confidence 4567799999999999999999862 46899999999999999998853 347899999998876 345689999986
Q ss_pred cchhhhcCCCC--------Ch-------hhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 123 GTLDSLMCGTN--------AP-------ISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 123 ~~l~~~~~~~~--------~~-------~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
..+.....-.. .. .....+++++.++|||||.++++++.
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 54321100000 01 12368899999999999999998875
No 191
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.44 E-value=2.3e-13 Score=113.76 Aligned_cols=109 Identities=18% Similarity=0.233 Sum_probs=82.9
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC------CCCCeEEEccccCCCCCCCCCeeEEE
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDMSFFEDESFDAVI 120 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~~D~v~ 120 (252)
+.+.+|||+|||+|..+..+++.. ..+++++|+++.+++.|++++.. .++++++++|+.+......++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 456799999999999999999874 56999999999999999998742 46899999998774213457899999
Q ss_pred eccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 121 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
++...+.. .........++++++++|+|||.+++..
T Consensus 174 ~d~~~~~~---~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMG---PAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC--------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCC---cchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 96543221 0001124678999999999999999876
No 192
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.44 E-value=1.1e-12 Score=112.00 Aligned_cols=107 Identities=18% Similarity=0.131 Sum_probs=91.4
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
++..+|+|+|||+|.++..+++.. ..+++..|. |.+++.++++.+. .++++++.+|+++.+ .+ .+|+|++..+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~-~~--~~D~~~~~~v 253 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP-LP--EADLYILARV 253 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC-CC--CCSEEEEESS
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC-CC--CceEEEeeee
Confidence 355699999999999999999884 557888997 8899999988753 348999999998754 33 4799999999
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
+|++ ++++..++|+++++.|+|||.++|.+...+
T Consensus 254 lh~~-----~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 254 LHDW-----ADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp GGGS-----CHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred cccC-----CHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 9999 778889999999999999999999997544
No 193
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.44 E-value=1.2e-12 Score=103.21 Aligned_cols=100 Identities=17% Similarity=0.222 Sum_probs=81.6
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
.++.+|||+|||+|.++..+++.+..+++++|+++.+++.++++....+ +++++++|+.+++ ++||+|+++.+++
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~----~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN----SRVDIVIMNPPFG 123 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC----CCCSEEEECCCCS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC----CCCCEEEEcCCCc
Confidence 3567999999999999999999876689999999999999999986544 7899999998864 3799999999887
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+. .......+++++.+++ || +++..
T Consensus 124 ~~-----~~~~~~~~l~~~~~~l--~~-~~~~~ 148 (207)
T 1wy7_A 124 SQ-----RKHADRPFLLKAFEIS--DV-VYSIH 148 (207)
T ss_dssp SS-----STTTTHHHHHHHHHHC--SE-EEEEE
T ss_pred cc-----cCCchHHHHHHHHHhc--Cc-EEEEE
Confidence 76 3344467888898888 55 44444
No 194
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.44 E-value=4.3e-13 Score=113.40 Aligned_cols=109 Identities=22% Similarity=0.358 Sum_probs=84.6
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC------CCCCeEEEccccCC-CCCCCCCeeE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDM-SFFEDESFDA 118 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~------~~~v~~~~~d~~~~-~~~~~~~~D~ 118 (252)
.+.+.+|||+|||+|..+..+++.. ..+++++|+++.+++.|++++.. .++++++++|+.+. +...+++||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 3566799999999999999999873 56999999999999999998742 35899999998765 2134578999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEE
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 158 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~ 158 (252)
|+++...... .........+++++.++|+|||.+++.
T Consensus 198 Ii~d~~~p~~---~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSSDPIG---PAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCCCTTS---GGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCccC---cchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9996542111 001112478999999999999999986
No 195
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.43 E-value=2.9e-13 Score=111.98 Aligned_cols=107 Identities=19% Similarity=0.244 Sum_probs=83.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc------------CCCCCeEEEccccCCCCCCCC
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE------------EIPQLKYLQMDVRDMSFFEDE 114 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~------------~~~~v~~~~~d~~~~~~~~~~ 114 (252)
.+.+.+|||+|||+|.++..+++.+..+++++|+++.+++.|++++. ..++++++++|+.+.... ++
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 35567999999999999999998865699999999999999999871 135789999998764212 56
Q ss_pred CeeEEEeccchhhhcCCCCChhh--HHHHHHHHHHcccCCcEEEEEE
Q 025475 115 SFDAVIDKGTLDSLMCGTNAPIS--ASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~~~~~~--~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+||+|+++...+.- +... ...++++++++|+|||.+++..
T Consensus 152 ~fD~Ii~d~~~~~~-----~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 152 GFDVIIADSTDPVG-----PAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CEEEEEEECCCCC----------TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCC-----cchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 89999987653211 1122 3788999999999999998864
No 196
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.43 E-value=2.5e-13 Score=112.09 Aligned_cols=103 Identities=20% Similarity=0.346 Sum_probs=86.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcC-----CCCCeEEEccccCCCCCCCCCeeEE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEE-----IPQLKYLQMDVRDMSFFEDESFDAV 119 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~D~v 119 (252)
+.++.+|||+|||+|.++..++.. + ..+++++|+++.+++.+++++.. ..+++++++|+.+.+ +++++||+|
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~-~~~~~~D~v 175 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE-LPDGSVDRA 175 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC-CCTTCEEEE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC-CCCCceeEE
Confidence 457779999999999999999985 3 46999999999999999998743 247999999998876 667789999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+++ . .++..+++++.++|+|||.+++.....
T Consensus 176 ~~~-----~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 176 VLD-----M-------LAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp EEE-----S-------SCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred EEC-----C-------cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 983 2 345578999999999999999988653
No 197
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.43 E-value=2.7e-13 Score=110.40 Aligned_cols=101 Identities=19% Similarity=0.276 Sum_probs=85.1
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcC--CC-CCeEEEccccCCCCCCCCCeeEEEe
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEE--IP-QLKYLQMDVRDMSFFEDESFDAVID 121 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~--~~-~v~~~~~d~~~~~~~~~~~~D~v~~ 121 (252)
+.++.+|||+|||+|.++..+++. + ..+++++|+++.+++.|+++++. .+ +++++++|+.+. +++++||+|++
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~ 168 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG--IEEENVDHVIL 168 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC--CCCCSEEEEEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc--cCCCCcCEEEE
Confidence 457779999999999999999988 4 56999999999999999998753 23 499999999865 46678999997
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+ . .+...+++++.++|+|||.+++....
T Consensus 169 ~-----~-------~~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 169 D-----L-------PQPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp C-----S-------SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred C-----C-------CCHHHHHHHHHHHcCCCCEEEEEECC
Confidence 3 2 45567899999999999999988754
No 198
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.43 E-value=2.1e-13 Score=112.44 Aligned_cols=110 Identities=18% Similarity=0.246 Sum_probs=85.4
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc------CCCCCeEEEccccCCCCCCCCCeeEEE
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE------EIPQLKYLQMDVRDMSFFEDESFDAVI 120 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~------~~~~v~~~~~d~~~~~~~~~~~~D~v~ 120 (252)
+.+.+|||+|||+|..+..+++. +..++++||+++.+++.|++++. ..++++++.+|+.+......++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 45679999999999999999988 56699999999999999999873 135899999998774213457899999
Q ss_pred eccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 121 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
++...+.. .+..-....+++.+.++|+|||.+++...
T Consensus 154 ~d~~~~~~---~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 154 VDSTEPVG---PAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp ESCSSCCS---CCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred ECCCCCCC---cchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 97653221 11111236789999999999999988753
No 199
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.43 E-value=3.3e-13 Score=112.51 Aligned_cols=111 Identities=16% Similarity=0.272 Sum_probs=83.4
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC------CCCCeEEEccccCCCCCCCCCeeEEE
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDMSFFEDESFDAVI 120 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~~D~v~ 120 (252)
+.+.+|||+|||+|..+..+++. +..+++++|+++.+++.+++++.. .++++++++|+.+......++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 45679999999999999999988 456999999999999999998732 35899999998774213456899999
Q ss_pred eccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 121 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
++....+. +.........+++++.++|+|||.+++...
T Consensus 169 ~d~~~~~~--~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 169 IDSTDPTA--GQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEC------------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCccc--CchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 86442212 000001237889999999999999998753
No 200
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.43 E-value=5.7e-13 Score=111.23 Aligned_cols=108 Identities=18% Similarity=0.253 Sum_probs=84.5
Q ss_pred CcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCC-CCCCCCeeEEEeccchh
Q 025475 51 SRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMS-FFEDESFDAVIDKGTLD 126 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~-~~~~~~~D~v~~~~~l~ 126 (252)
.+|||+|||+|.++..+++. ...++++||+++.+++.|++++.. .++++++++|..++. ...+++||+|++....+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 49999999999999999984 344899999999999999999853 358999999998753 13467899999975433
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
.. .+..-....+++.++++|+|||++++....
T Consensus 171 ~~---~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 171 AI---TPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp SC---CCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cc---cchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 21 111112378999999999999999887754
No 201
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.43 E-value=1.2e-13 Score=105.54 Aligned_cols=107 Identities=21% Similarity=0.262 Sum_probs=82.0
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC-------CCCCCee
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF-------FEDESFD 117 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~-------~~~~~~D 117 (252)
..++.+|||+|||+|.++..+++. + ..+++++|+++ +++. ++++++++|+.+.+. +++++||
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D 90 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------VGVDFLQGDFRDELVMKALLERVGDSKVQ 90 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------TTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------CcEEEEEcccccchhhhhhhccCCCCcee
Confidence 456779999999999999999987 4 36999999999 6532 468899999987530 3457899
Q ss_pred EEEeccchhhhcCCCCChhhH------HHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 118 AVIDKGTLDSLMCGTNAPISA------SQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 118 ~v~~~~~l~~~~~~~~~~~~~------~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
+|+++.++++. +....+.. ..+++++.++|+|||.+++..+..+.
T Consensus 91 ~i~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 91 VVMSDMAPNMS--GTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp EEEECCCCCCC--SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred EEEECCCcccc--CCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 99999887765 00001111 68899999999999999998876543
No 202
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.43 E-value=5.2e-13 Score=123.27 Aligned_cols=124 Identities=14% Similarity=0.118 Sum_probs=93.9
Q ss_pred hhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC----CCCeEEEccccCCCCCC
Q 025475 37 SALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI----PQLKYLQMDVRDMSFFE 112 (252)
Q Consensus 37 ~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~----~~v~~~~~d~~~~~~~~ 112 (252)
......+... .++.+|||+|||+|.++..++..|..+|+++|+|+.+++.++++++.. .+++++++|+.+.....
T Consensus 528 r~~r~~l~~~-~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~ 606 (703)
T 3v97_A 528 RIARRMLGQM-SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA 606 (703)
T ss_dssp HHHHHHHHHH-CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC
T ss_pred HHHHHHHHHh-cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc
Confidence 3445555554 467899999999999999999988768999999999999999998532 26899999998853234
Q ss_pred CCCeeEEEeccchhhhcC----CCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 113 DESFDAVIDKGTLDSLMC----GTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 113 ~~~~D~v~~~~~l~~~~~----~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
.++||+|+++.+...-.. ......+...++..+.++|+|||.+++....
T Consensus 607 ~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 607 NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 578999999875311000 0011267788999999999999999987754
No 203
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.43 E-value=3e-13 Score=112.11 Aligned_cols=108 Identities=14% Similarity=0.138 Sum_probs=81.5
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC---CCeEEEccccCCCCCCCCCe---eEEEec
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP---QLKYLQMDVRDMSFFEDESF---DAVIDK 122 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~---~v~~~~~d~~~~~~~~~~~~---D~v~~~ 122 (252)
++.+|||+|||+|.++..++..+..+++++|+|+.+++.|+++....+ +++++++|+.+.. . ++| |+|+++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~--~-~~f~~~D~Ivsn 199 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF--K-EKFASIEMILSN 199 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG--G-GGTTTCCEEEEC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc--c-cccCCCCEEEEc
Confidence 556999999999999999988743589999999999999999985432 4999999998743 2 478 999998
Q ss_pred cchhhhcC----CCC--C------hhhHHHHHHHHH-HcccCCcEEEEEE
Q 025475 123 GTLDSLMC----GTN--A------PISASQMLGEVS-RLLKPGGIYMLIT 159 (252)
Q Consensus 123 ~~l~~~~~----~~~--~------~~~~~~~l~~~~-~~L~~gG~l~i~~ 159 (252)
.++..... ... + ..+...+++++. +.|+|||.+++..
T Consensus 200 PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 66542200 000 0 011237899999 9999999998744
No 204
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.42 E-value=4e-13 Score=107.16 Aligned_cols=104 Identities=13% Similarity=0.104 Sum_probs=82.8
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCC-CCC---CCCeeE
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMS-FFE---DESFDA 118 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~-~~~---~~~~D~ 118 (252)
.++.+|||+|||+|..+..+++.. ..+++++|+++.+++.+++++... ++++++++|+.+.. .+. .++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 356799999999999999999872 359999999999999999988532 25999999987642 111 257999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
|++.... .....+++++.++|+|||.+++.+..
T Consensus 137 v~~d~~~----------~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 137 IFIDADK----------QNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EEECSCG----------GGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEEcCCc----------HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 9987542 45578999999999999988876543
No 205
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.42 E-value=3.2e-13 Score=113.32 Aligned_cols=108 Identities=21% Similarity=0.284 Sum_probs=81.8
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC------CCCCeEEEccccCCCCCCCCCeeEE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDMSFFEDESFDAV 119 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~~D~v 119 (252)
.+.+.+|||+|||+|..+..+++.. ..+++++|+++.+++.|++++.. .++++++.+|+.+......++||+|
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 3556799999999999999999873 56999999999999999998853 3579999999877421345789999
Q ss_pred EeccchhhhcCCCCChhhH--HHHHHHHHHcccCCcEEEEEE
Q 025475 120 IDKGTLDSLMCGTNAPISA--SQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~--~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+++... ++ .+.... ..+++.++++|+|||.+++..
T Consensus 186 i~d~~~-~~----~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSSD-PV----GPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC------------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCC-CC----CcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 987642 22 011222 789999999999999999865
No 206
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.42 E-value=6.7e-13 Score=109.43 Aligned_cols=115 Identities=13% Similarity=0.161 Sum_probs=87.1
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCCCCC---CCCCeeEE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFF---EDESFDAV 119 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~--~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~~~~---~~~~~D~v 119 (252)
..++.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++++... .+++++++|+.+.+.. ..++||+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 356779999999999999999885 3469999999999999999988543 3789999999876511 25689999
Q ss_pred EeccchhhhcCCC-----------CChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 120 IDKGTLDSLMCGT-----------NAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 120 ~~~~~l~~~~~~~-----------~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+++..+.....-. .-......+++++.++|||||.++++++.
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 9985433210000 00134578999999999999999998865
No 207
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.42 E-value=9.5e-13 Score=103.17 Aligned_cols=106 Identities=15% Similarity=0.353 Sum_probs=78.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC---CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC-------------
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG---YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF------------- 110 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~---~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~------------- 110 (252)
++++.+|||+|||+|.++..+++.. ..+++|+|+++.+ ..++++++++|+.+.+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------CCCCceEEEccccchhhhhhcccccccccc
Confidence 4677899999999999999999873 3689999999831 22478999999987640
Q ss_pred -----------CCCCCeeEEEeccchhhhcCCCCChhh------HHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 111 -----------FEDESFDAVIDKGTLDSLMCGTNAPIS------ASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 111 -----------~~~~~~D~v~~~~~l~~~~~~~~~~~~------~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
+++++||+|+++.++++. +....+. ..+++++++++|+|||.+++..+..+
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~--g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCI--GNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS 158 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCC--SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCC--CCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC
Confidence 245689999998876652 0000011 23588999999999999998776543
No 208
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.42 E-value=2.3e-13 Score=108.65 Aligned_cols=103 Identities=13% Similarity=0.148 Sum_probs=83.0
Q ss_pred CCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCC-CC----CCCeeE
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSF-FE----DESFDA 118 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~-~~----~~~~D~ 118 (252)
++.+|||+|||+|..+..++.. + ..+++++|+++.+++.++++++.. ++++++++|+.+... .. .++||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 5679999999999999999987 2 469999999999999999988542 359999999866421 11 168999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
|++... ..+...+++++.++|+|||++++.+..
T Consensus 144 v~~~~~----------~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 144 IYIDAD----------KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEECSC----------GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEECCC----------HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 997543 255678999999999999999986644
No 209
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.41 E-value=3.9e-13 Score=108.05 Aligned_cols=103 Identities=15% Similarity=0.183 Sum_probs=84.0
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCC--CCCeeEEEe
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFE--DESFDAVID 121 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~--~~~~D~v~~ 121 (252)
.++.+|||+|||+|..+..+++.. ..+++++|+++.+++.|++++... ++++++++|+.+..... +++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 356799999999999999999873 459999999999999999987542 36899999998752122 568999998
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
.... .+...+++.+.++|+|||.+++.+.
T Consensus 133 ~~~~----------~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 133 DAAK----------GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EGGG----------SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CCCH----------HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 6553 3557889999999999999998653
No 210
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.41 E-value=2.8e-12 Score=100.09 Aligned_cols=114 Identities=17% Similarity=0.311 Sum_probs=82.2
Q ss_pred hHHHHHhh--CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC------
Q 025475 39 LRPFVRKY--IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF------ 110 (252)
Q Consensus 39 l~~~~~~~--~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~------ 110 (252)
+.+++.+. ++++.+|||+|||+|.++..+++. ..+|+|+|+++.. ..++++++++|+.+...
T Consensus 13 L~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~---------~~~~v~~~~~D~~~~~~~~~~~~ 82 (191)
T 3dou_A 13 LEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME---------EIAGVRFIRCDIFKETIFDDIDR 82 (191)
T ss_dssp HHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC---------CCTTCEEEECCTTSSSHHHHHHH
T ss_pred HHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc---------cCCCeEEEEccccCHHHHHHHHH
Confidence 44445444 567889999999999999999988 4599999999741 23579999999988641
Q ss_pred -CC---CCCeeEEEeccchhhhcCCC------CChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 111 -FE---DESFDAVIDKGTLDSLMCGT------NAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 111 -~~---~~~~D~v~~~~~l~~~~~~~------~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
+. .++||+|+++...... +. ........+++.+.++|+|||.+++..+..+.
T Consensus 83 ~~~~~~~~~~D~Vlsd~~~~~~--g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 83 ALREEGIEKVDDVVSDAMAKVS--GIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp HHHHHTCSSEEEEEECCCCCCC--SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH
T ss_pred HhhcccCCcceEEecCCCcCCC--CCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC
Confidence 01 1489999997532211 00 01123467889999999999999998876655
No 211
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.41 E-value=7.5e-13 Score=114.75 Aligned_cols=130 Identities=19% Similarity=0.226 Sum_probs=95.9
Q ss_pred eeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--C-C-CCeEEEccccC
Q 025475 32 WYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--I-P-QLKYLQMDVRD 107 (252)
Q Consensus 32 ~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~-~-~v~~~~~d~~~ 107 (252)
+++........+... .++.+|||+|||+|.++..++..|..+|+++|+|+.+++.|++++.. . . +++++++|+.+
T Consensus 204 ff~~~~~~~~~l~~~-~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~ 282 (396)
T 3c0k_A 204 YYLDQRDSRLATRRY-VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFK 282 (396)
T ss_dssp SCGGGHHHHHHHHHH-CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHH
T ss_pred cCcCHHHHHHHHHHh-hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHH
Confidence 333333344555554 56779999999999999999998766999999999999999998853 2 3 68999999987
Q ss_pred CCC-C--CCCCeeEEEeccchhhhc--CCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 108 MSF-F--EDESFDAVIDKGTLDSLM--CGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 108 ~~~-~--~~~~~D~v~~~~~l~~~~--~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
... . ...+||+|+++.+..... ...........++.++.++|+|||.+++++...
T Consensus 283 ~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 283 LLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp HHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 631 1 146899999986532110 000111567889999999999999999988653
No 212
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.40 E-value=1.2e-12 Score=112.59 Aligned_cols=103 Identities=16% Similarity=0.226 Sum_probs=84.2
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCC-CcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccC-CCCCCCCCeeEEEeccc
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGY-EDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRD-MSFFEDESFDAVIDKGT 124 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~-~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~-~~~~~~~~~D~v~~~~~ 124 (252)
++.+|||+| |+|.++..++..+. .+++++|+++.+++.|+++++. ..+++++++|+.+ ++...+++||+|+++.+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 567999999 99999999988863 6999999999999999999853 2379999999988 54113468999999987
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEE-EEEEc
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIY-MLITY 160 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l-~i~~~ 160 (252)
++.. . ...+++++.++|+|||.+ ++...
T Consensus 251 ~~~~-------~-~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 251 ETLE-------A-IRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp SSHH-------H-HHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CchH-------H-HHHHHHHHHHHcccCCeEEEEEEe
Confidence 7654 3 588999999999999954 44443
No 213
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.40 E-value=3.7e-13 Score=106.43 Aligned_cols=100 Identities=12% Similarity=0.136 Sum_probs=80.9
Q ss_pred CCCcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
++.+|||+|||+|..+..+++.. ..+++++|+++.+++.++++++.. ++++++++|..+..+..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 46699999999999999999872 459999999999999999887532 2589999998765213345 99999863
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
. . .+...+++++.++|+|||.+++.+
T Consensus 135 ~---~-------~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 D---V-------FNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T---T-------SCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C---h-------hhhHHHHHHHHHhcCCCeEEEEEC
Confidence 2 2 566789999999999999998754
No 214
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.40 E-value=1.4e-12 Score=110.67 Aligned_cols=104 Identities=21% Similarity=0.283 Sum_probs=81.3
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcC-------------CCCCeEEEccccCCC-C
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEE-------------IPQLKYLQMDVRDMS-F 110 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~-------------~~~v~~~~~d~~~~~-~ 110 (252)
+.++.+|||+|||+|.++..++.. | ..+++++|+++.+++.|++++.. ..+++++++|+.+.. .
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 567789999999999999999987 5 36999999999999999998752 247999999998863 2
Q ss_pred CCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 111 FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 111 ~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+++++||+|+++.. ....++.++.++|+|||.+++.....
T Consensus 183 ~~~~~fD~V~~~~~------------~~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 183 IKSLTFDAVALDML------------NPHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp -----EEEEEECSS------------STTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred cCCCCeeEEEECCC------------CHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 55678999998532 22337899999999999999877643
No 215
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.39 E-value=5.5e-13 Score=115.05 Aligned_cols=126 Identities=19% Similarity=0.212 Sum_probs=93.3
Q ss_pred eeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCCC
Q 025475 32 WYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMS 109 (252)
Q Consensus 32 ~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~~ 109 (252)
|+.........+... ++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++++... .+++++++|+.+..
T Consensus 194 ~f~~~~~~~~~~~~~--~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~ 270 (382)
T 1wxx_A 194 AYLDQRENRLYMERF--RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLL 270 (382)
T ss_dssp CCGGGHHHHHHGGGC--CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHH
T ss_pred cccchHHHHHHHHhc--CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHH
Confidence 333333334444443 6779999999999999999988 568999999999999999998543 35899999998763
Q ss_pred C-C--CCCCeeEEEeccchhhhcCCC----CChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 110 F-F--EDESFDAVIDKGTLDSLMCGT----NAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 110 ~-~--~~~~~D~v~~~~~l~~~~~~~----~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
. . ...+||+|+++.+.... +. ........++..+.++|+|||.++++++..
T Consensus 271 ~~~~~~~~~fD~Ii~dpP~~~~--~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 271 RRLEKEGERFDLVVLDPPAFAK--GKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp HHHHHTTCCEEEEEECCCCSCC--STTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHhcCCCeeEEEECCCCCCC--ChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 1 1 25689999997653211 00 001556788999999999999999988654
No 216
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.39 E-value=1.7e-12 Score=104.94 Aligned_cols=100 Identities=14% Similarity=0.213 Sum_probs=83.7
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
.++.+|||+|||+|.++..+++. ..+++++|+++.+++.++++.... +++++..+|+.+.. ..+++||+|+++
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~-- 165 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VPEGIFHAAFVD-- 165 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CCTTCBSEEEEC--
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cCCCcccEEEEC--
Confidence 46779999999999999999988 559999999999999999987532 47899999998753 356789999973
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
. .++..+++++.++|+|||.+++....
T Consensus 166 ---~-------~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 166 ---V-------REPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp ---S-------SCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ---C-------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 2 34567799999999999999998864
No 217
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.38 E-value=4.2e-13 Score=108.26 Aligned_cols=99 Identities=11% Similarity=0.146 Sum_probs=78.7
Q ss_pred CCCcEEEEcccCcHhHHHHHHc----C-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCC---CCCCCCCeeEEE
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD----G-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM---SFFEDESFDAVI 120 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~----~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~---~~~~~~~~D~v~ 120 (252)
++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|+.. .++++++++|+.+. +.....+||+|+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~---~~~v~~~~gD~~~~~~l~~~~~~~fD~I~ 157 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD---MENITLHQGDCSDLTTFEHLREMAHPLIF 157 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG---CTTEEEEECCSSCSGGGGGGSSSCSSEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc---CCceEEEECcchhHHHHHhhccCCCCEEE
Confidence 4569999999999999999886 2 46999999999998888732 25799999999885 312334799999
Q ss_pred eccchhhhcCCCCChhhHHHHHHHHHH-cccCCcEEEEEEc
Q 025475 121 DKGTLDSLMCGTNAPISASQMLGEVSR-LLKPGGIYMLITY 160 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~~~l~~~~~-~L~~gG~l~i~~~ 160 (252)
+... | .+...++.++.+ +|+|||++++.+.
T Consensus 158 ~d~~--~--------~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 158 IDNA--H--------ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EESS--C--------SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred ECCc--h--------HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 8654 2 245678999997 9999999998653
No 218
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.38 E-value=7.8e-13 Score=106.28 Aligned_cols=116 Identities=13% Similarity=0.125 Sum_probs=92.8
Q ss_pred hhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCCCCCC
Q 025475 37 SALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFEDE 114 (252)
Q Consensus 37 ~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~ 114 (252)
..+-..+...+++..+|||+|||+|.++..+... +..+|+++|+++.+++.+++++...+ ..++...|....+ +.+
T Consensus 120 D~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~--p~~ 197 (281)
T 3lcv_B 120 DEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR--LDE 197 (281)
T ss_dssp HHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC--CCS
T ss_pred HHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC--CCC
Confidence 3344445555666779999999999999999887 46799999999999999999986533 5788888887664 567
Q ss_pred CeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 115 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
++|+++++-+++|+ ..+.....+ ++.+.|+++|.++-...
T Consensus 198 ~~DvaL~lkti~~L-----e~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 198 PADVTLLLKTLPCL-----ETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp CCSEEEETTCHHHH-----HHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred CcchHHHHHHHHHh-----hhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 89999999999999 444445566 89999999999876554
No 219
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.38 E-value=4e-13 Score=109.34 Aligned_cols=111 Identities=12% Similarity=0.164 Sum_probs=76.0
Q ss_pred CCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC--C-CCeEEEccccCC-C-CCC---CCCeeEE
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI--P-QLKYLQMDVRDM-S-FFE---DESFDAV 119 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~--~-~v~~~~~d~~~~-~-~~~---~~~~D~v 119 (252)
++.+|||+|||+|.++..++... ..+++++|+++.|++.|++++... . +++++++|+.+. . .++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 46699999999999999888762 359999999999999999988542 2 489999998762 1 133 2589999
Q ss_pred EeccchhhhcCC---C--C---ChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 120 IDKGTLDSLMCG---T--N---APISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 120 ~~~~~l~~~~~~---~--~---~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+++.++++..-. . + .......++.+++++|+|||.+.+..
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 999887754100 0 0 00122356788899999999877654
No 220
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.37 E-value=2.4e-12 Score=102.45 Aligned_cols=102 Identities=19% Similarity=0.117 Sum_probs=83.5
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
.++.+|||+|||+|.++..+. +..+++++|+++.+++.+++++.. ..+..+..+|....+ +.+++|+|++.-++|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~--~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP--PAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC--CCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC--CCCCcchHHHHHHHH
Confidence 567799999999999999888 456999999999999999999854 346788999998776 445899999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+ ..+.....+ ++.+.|+++|.++-..
T Consensus 180 ~L-----E~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 180 LL-----EREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HH-----HHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred Hh-----hhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 99 444445555 7888899998876654
No 221
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.37 E-value=1.4e-12 Score=111.61 Aligned_cols=101 Identities=16% Similarity=0.108 Sum_probs=84.6
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
++..+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++ .++++++.+|+.+ + ++ +||+|++..++|
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~-~~--~~D~v~~~~vlh 262 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----NENLNFVGGDMFK-S-IP--SADAVLLKWVLH 262 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----CSSEEEEECCTTT-C-CC--CCSEEEEESCGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----CCCcEEEeCccCC-C-CC--CceEEEEccccc
Confidence 356799999999999999999884 458999999 788876654 2469999999987 4 55 499999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccC---CcEEEEEEcCC
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKP---GGIYMLITYGD 162 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~---gG~l~i~~~~~ 162 (252)
|+ +++...+++++++++|+| ||++++.++..
T Consensus 263 ~~-----~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 263 DW-----NDEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp GS-----CHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred CC-----CHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 99 555566999999999999 99999988643
No 222
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.37 E-value=5.2e-12 Score=108.60 Aligned_cols=112 Identities=16% Similarity=0.143 Sum_probs=85.1
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
..++.+|||+|||+|.++..++..+ ..+++|+|+++.+++.|+.++... ++++++++|+.+++ .++++||+|+++
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~fD~Ii~n 293 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS-QYVDSVDFAISN 293 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG-GTCSCEEEEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-cccCCcCEEEEC
Confidence 5677899999999999999999986 348999999999999999998543 37999999999987 667889999998
Q ss_pred cchhhhcCCCCChhh-HHHHHHHHHHcccCCcEEEEEEcC
Q 025475 123 GTLDSLMCGTNAPIS-ASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~-~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
.++............ ...+++++.++| +|.+++....
T Consensus 294 pPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~ 331 (373)
T 3tm4_A 294 LPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE 331 (373)
T ss_dssp CCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC
T ss_pred CCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC
Confidence 876543111111122 377889999988 5555555543
No 223
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.36 E-value=1.5e-12 Score=107.34 Aligned_cols=101 Identities=13% Similarity=0.250 Sum_probs=84.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEe
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVID 121 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~ 121 (252)
+.++.+|||+|||+|.++..+++. + ..+++++|+++.+++.+++++... ++++++++|+.+. +++++||+|++
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~V~~ 187 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG--FDEKDVDALFL 187 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--CSCCSEEEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--ccCCccCEEEE
Confidence 456779999999999999999987 4 569999999999999999987543 3689999999876 45568999997
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+ . .++..+++++.++|+|||.+++....
T Consensus 188 ~-----~-------~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 188 D-----V-------PDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp C-----C-------SCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred C-----C-------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 4 2 34567899999999999999998864
No 224
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.36 E-value=1.4e-12 Score=106.70 Aligned_cols=95 Identities=12% Similarity=0.148 Sum_probs=79.6
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC------CCCCeEEEccccCCCCCCCCCeeEEEe
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDMSFFEDESFDAVID 121 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~~D~v~~ 121 (252)
+.+.+|||+|||+|..+..+++.+ .+++++|+++.+++.|++++.. .++++++.+|..+.. ++||+|++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii~ 145 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIFC 145 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEEE
Confidence 455799999999999999998886 7999999999999999987642 357999999998763 68999998
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.. .++..+++.+.++|+|||.+++..
T Consensus 146 d~------------~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 146 LQ------------EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp SS------------CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred CC------------CChHHHHHHHHHhcCCCcEEEEEc
Confidence 62 122348999999999999998865
No 225
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.36 E-value=1.4e-13 Score=111.58 Aligned_cols=102 Identities=14% Similarity=0.110 Sum_probs=82.9
Q ss_pred CCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCC-----CCCeeE
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFE-----DESFDA 118 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~-----~~~~D~ 118 (252)
++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|+++++.. ++++++++|+.+..... .++||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 5669999999999999999985 2 459999999999999999988532 37999999997753111 478999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
|++... . .....+++++.++|+|||.+++-+.
T Consensus 140 V~~d~~---~-------~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 140 IFIDAD---K-------TNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEESC---G-------GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEcCC---h-------HHhHHHHHHHHHhcCCCeEEEEECC
Confidence 998654 2 5567789999999999999998654
No 226
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.36 E-value=2.1e-12 Score=104.24 Aligned_cols=103 Identities=16% Similarity=0.146 Sum_probs=82.5
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcCCC---CCeEEEccccCC-CC-----------
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEEIP---QLKYLQMDVRDM-SF----------- 110 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~a~~~~~~~~---~v~~~~~d~~~~-~~----------- 110 (252)
.++.+|||+|||+|..+..+++.. ..+++++|+++.+++.+++++...+ +++++++|+.+. +.
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 356799999999999999999873 4599999999999999999875422 489999998653 10
Q ss_pred --CCC--CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 111 --FED--ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 111 --~~~--~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+++ ++||+|++.... .....+++++.++|+|||.+++.+.
T Consensus 139 ~~f~~~~~~fD~I~~~~~~----------~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADK----------ENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp TTTCCSTTCEEEEEECSCG----------GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccccCCCCCcCEEEEeCCH----------HHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 122 689999987543 4456889999999999999998764
No 227
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.35 E-value=8.4e-13 Score=107.22 Aligned_cols=102 Identities=10% Similarity=0.074 Sum_probs=82.2
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCC-CCC-----CCCCe
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDM-SFF-----EDESF 116 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~-~~~-----~~~~~ 116 (252)
.++.+|||+|||+|..+..+++. . ..+++++|+++.+++.+++++... ++++++++|+.+. +.+ ..++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 34569999999999999999986 2 459999999999999999988543 3689999998764 212 15789
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+|++... . .+...+++++.++|+|||.+++..
T Consensus 158 D~V~~d~~---~-------~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDAD---K-------DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSC---S-------TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCc---h-------HHHHHHHHHHHHhCCCCeEEEEec
Confidence 99998643 1 456788999999999999998755
No 228
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.34 E-value=6.3e-13 Score=106.88 Aligned_cols=108 Identities=15% Similarity=0.205 Sum_probs=72.0
Q ss_pred hHHHHHhhC--CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEE-EccccCCC--CCCC
Q 025475 39 LRPFVRKYI--PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYL-QMDVRDMS--FFED 113 (252)
Q Consensus 39 l~~~~~~~~--~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~-~~d~~~~~--~~~~ 113 (252)
+.+.+.... .++.+|||+|||+|.++..+++.|..+|+|+|+|+.|++.++++... +... ..++.... .+..
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~---~~~~~~~~~~~~~~~~~~~ 101 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDER---VVVMEQFNFRNAVLADFEQ 101 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTT---EEEECSCCGGGCCGGGCCS
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcc---ccccccceEEEeCHhHcCc
Confidence 444454442 24569999999999999999999866999999999999998776432 1111 11221111 0122
Q ss_pred CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 114 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
..+|.+.+..++.++ ..++++++++|+|||.+++..
T Consensus 102 ~~~d~~~~D~v~~~l----------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 102 GRPSFTSIDVSFISL----------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CCCSEEEECCSSSCG----------GGTHHHHHHHSCTTCEEEEEE
T ss_pred CCCCEEEEEEEhhhH----------HHHHHHHHHhccCCCEEEEEE
Confidence 224555555444333 568999999999999998864
No 229
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.34 E-value=3e-12 Score=99.80 Aligned_cols=106 Identities=17% Similarity=0.295 Sum_probs=77.7
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-CC---------CcEEEEeCCHHHHHHHHHhhcCCCCCeEE-EccccCCCC-----
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-GY---------EDIVNIDISSVAIDMMKMKYEEIPQLKYL-QMDVRDMSF----- 110 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-~~---------~~v~~vD~s~~~i~~a~~~~~~~~~v~~~-~~d~~~~~~----- 110 (252)
++++.+|||+|||+|.++..+++. +. .+++++|+++.+ ..++++++ ++|+.+...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------cCCCCeEEEeccCCCHHHHHHHH
Confidence 567889999999999999999987 43 689999999831 12467888 888776420
Q ss_pred --CCCCCeeEEEeccchhhhcCCCCChhhH-------HHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 111 --FEDESFDAVIDKGTLDSLMCGTNAPISA-------SQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 111 --~~~~~~D~v~~~~~l~~~~~~~~~~~~~-------~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
+++++||+|+++.+++.... ...+. ..+++++.++|+|||.+++..+..+.
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGF---RDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSC---HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred HhcCCCCCcEEEeCCCCCCCCC---cccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 23458999999765442100 00222 58899999999999999998876543
No 230
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.34 E-value=2.7e-12 Score=108.79 Aligned_cols=105 Identities=21% Similarity=0.230 Sum_probs=85.6
Q ss_pred HHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeE
Q 025475 42 FVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDA 118 (252)
Q Consensus 42 ~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~ 118 (252)
.+...+.++.+|||+|||+|.++.. +. +..+++++|+|+.+++.++++++.. ++++++++|+.+.. ++||+
T Consensus 188 ~i~~~~~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~ 261 (336)
T 2yx1_A 188 RIMKKVSLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNR 261 (336)
T ss_dssp HHHHHCCTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEE
T ss_pred HHHHhcCCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcE
Confidence 4445566788999999999999999 77 5669999999999999999998542 36899999998874 68999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
|+++.+.. ...++..+.++|+|||.+++.++...
T Consensus 262 Vi~dpP~~-----------~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 262 VIMNLPKF-----------AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp EEECCTTT-----------GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred EEECCcHh-----------HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 99875422 23678889999999999998876543
No 231
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.33 E-value=7.9e-13 Score=101.57 Aligned_cols=89 Identities=18% Similarity=0.306 Sum_probs=76.3
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---CCCCeeEEEecc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---EDESFDAVIDKG 123 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---~~~~~D~v~~~~ 123 (252)
+.++.+|||+|||. +++|+|+.|++.|+++... +++++++|+.+++ + ++++||+|++..
T Consensus 10 ~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~--~~~~~~~d~~~~~-~~~~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN--EGRVSVENIKQLL-QSAHKESSFDIILSGL 71 (176)
T ss_dssp CCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT--TSEEEEEEGGGGG-GGCCCSSCEEEEEECC
T ss_pred CCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc--CcEEEEechhcCc-cccCCCCCEeEEEECC
Confidence 56788999999986 1399999999999998753 5899999999887 5 678999999999
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
++||+ . .+...++++++++|||||++++..
T Consensus 72 ~l~~~-----~-~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 72 VPGST-----T-LHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp STTCC-----C-CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhc-----c-cCHHHHHHHHHHHCCCCEEEEEEc
Confidence 99986 2 345889999999999999999954
No 232
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.32 E-value=9.8e-12 Score=103.00 Aligned_cols=77 Identities=17% Similarity=0.251 Sum_probs=65.7
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
.++.+|||+|||+|.++..+++.+. +++++|+++.+++.+++++... ++++++++|+.+.+ ++ +||+|+++.+
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~-~~--~fD~vv~nlp 102 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD-LP--FFDTCVANLP 102 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC-CC--CCSEEEEECC
T ss_pred CCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc-ch--hhcEEEEecC
Confidence 4667999999999999999999864 9999999999999999987543 36899999998876 44 7999999877
Q ss_pred hhhh
Q 025475 125 LDSL 128 (252)
Q Consensus 125 l~~~ 128 (252)
++..
T Consensus 103 y~~~ 106 (285)
T 1zq9_A 103 YQIS 106 (285)
T ss_dssp GGGH
T ss_pred cccc
Confidence 6654
No 233
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.31 E-value=1.9e-11 Score=107.55 Aligned_cols=116 Identities=18% Similarity=0.155 Sum_probs=87.0
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCC-CCCCCeeEEEe
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSF-FEDESFDAVID 121 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~-~~~~~~D~v~~ 121 (252)
..++.+|||+|||+|..+..++... ..+++++|+++.+++.+++++.. ..+++++++|+.+.+. +.+++||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 4567799999999999999999862 36899999999999999999854 3478999999988752 34468999998
Q ss_pred ccchhhhcCCC--C------Chhh-------HHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 122 KGTLDSLMCGT--N------APIS-------ASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 122 ~~~l~~~~~~~--~------~~~~-------~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+.++....... + .+.+ ...+++++.++|+|||.++++++..
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 54322110000 0 0011 2678999999999999999988763
No 234
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.31 E-value=2.7e-12 Score=103.52 Aligned_cols=103 Identities=14% Similarity=0.092 Sum_probs=82.7
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCC-CC-----CCCCe
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMS-FF-----EDESF 116 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~-~~-----~~~~~ 116 (252)
.++.+|||+|||+|..+..+++. + ..+++++|+++.+++.++++++.. ++++++++|+.+.. .+ ..++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 35669999999999999999986 2 469999999999999999988543 25899999987642 12 25689
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
|+|++... ..+...+++.+.++|+|||.+++...
T Consensus 149 D~I~~d~~----------~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 149 DFGFVDAD----------KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEEEECSC----------GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CEEEECCc----------hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 99998632 25668899999999999999987653
No 235
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.31 E-value=7.3e-13 Score=109.13 Aligned_cols=106 Identities=18% Similarity=0.157 Sum_probs=76.0
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc---CCC-CCeEE--EccccCCCCCCCCCeeEEE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE---EIP-QLKYL--QMDVRDMSFFEDESFDAVI 120 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~---~~~-~v~~~--~~d~~~~~~~~~~~~D~v~ 120 (252)
+.++.+|||+|||+|.++..+++. .+|+|+|+++ |+..+++... ..+ ++.++ ++|+.+++ +++||+|+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~---~~~fD~Vv 153 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME---PFQADTVL 153 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC---CCCCSEEE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC---CCCcCEEE
Confidence 456779999999999999999988 5999999998 5433322110 111 67888 89998864 56899999
Q ss_pred eccchhhhcCCCCChhhH--HHHHHHHHHcccCCc--EEEEEEcC
Q 025475 121 DKGTLDSLMCGTNAPISA--SQMLGEVSRLLKPGG--IYMLITYG 161 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~--~~~l~~~~~~L~~gG--~l~i~~~~ 161 (252)
++.+ ++. +.+..+.. ..+++.+.++|+||| .+++..+.
T Consensus 154 sd~~-~~~--~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 154 CDIG-ESN--PTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp ECCC-CCC--SCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred ECCC-cCC--CchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 9876 332 00000111 137899999999999 99887776
No 236
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.31 E-value=5.9e-12 Score=107.10 Aligned_cols=110 Identities=15% Similarity=0.188 Sum_probs=83.3
Q ss_pred CCCcEEEEcccCcHhHHHHHHcC-C-----CcEEEEeCCHHHHHHHHHhhcCC-CCCeEEEccccCCCCCCCCCeeEEEe
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDG-Y-----EDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVID 121 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~-~-----~~v~~vD~s~~~i~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~~D~v~~ 121 (252)
++.+|||+|||+|.++..+++.. . .+++|+|+++.+++.|+.+.... .++.++++|..... ..++||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~--~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANL--LVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCC--CCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCcc--ccCCccEEEE
Confidence 45699999999999999888763 1 58999999999999999986421 26889999987653 4568999999
Q ss_pred ccchhhhcC-------C---CCChh-hHHHHHHHHHHcccCCcEEEEEEc
Q 025475 122 KGTLDSLMC-------G---TNAPI-SASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 122 ~~~l~~~~~-------~---~~~~~-~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+.+++++.. . ..+.. ....++..+.+.|+|||+++++..
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 998766500 0 00001 113689999999999999988873
No 237
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.31 E-value=7.8e-13 Score=108.35 Aligned_cols=106 Identities=11% Similarity=0.083 Sum_probs=75.7
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhh-c--CCC-CCeEE--EccccCCCCCCCCCeeEEE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKY-E--EIP-QLKYL--QMDVRDMSFFEDESFDAVI 120 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~-~--~~~-~v~~~--~~d~~~~~~~~~~~~D~v~ 120 (252)
+.++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.. . ..+ ++.++ ++|+.+++ +++||+|+
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~---~~~fD~V~ 145 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP---VERTDVIM 145 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC---CCCCSEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC---CCCCcEEE
Confidence 456779999999999999999987 5999999998 532222111 0 011 67888 88998864 56899999
Q ss_pred eccchhhhcCCCCChhhH--HHHHHHHHHcccCCc--EEEEEEcC
Q 025475 121 DKGTLDSLMCGTNAPISA--SQMLGEVSRLLKPGG--IYMLITYG 161 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~--~~~l~~~~~~L~~gG--~l~i~~~~ 161 (252)
++.+ ++. +.+..+.. ..+++.+.++|+||| .+++..+.
T Consensus 146 sd~~-~~~--~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 146 CDVG-ESS--PKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp ECCC-CCC--SCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EeCc-ccC--CccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 9876 332 00000111 137899999999999 99988776
No 238
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.31 E-value=4.5e-12 Score=111.06 Aligned_cols=115 Identities=13% Similarity=0.122 Sum_probs=86.8
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~--~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
..++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++++.. ..++.++++|..++.....++||+|+++
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 456789999999999999999876 345899999999999999998854 3478899999887642235689999987
Q ss_pred cchhhhcCCCCCh---------------hhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 123 GTLDSLMCGTNAP---------------ISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 123 ~~l~~~~~~~~~~---------------~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
..+.-......++ .....++..+.++|+|||+|+.+++.
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 6532110000111 12247899999999999999998875
No 239
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.29 E-value=7.9e-12 Score=100.44 Aligned_cols=103 Identities=14% Similarity=0.114 Sum_probs=81.8
Q ss_pred CCCcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcC--C-CCCeEEEccccCC-CC--CCC--CCeeE
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDM-SF--FED--ESFDA 118 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~a~~~~~~--~-~~v~~~~~d~~~~-~~--~~~--~~~D~ 118 (252)
++.+|||+|||+|..+..+++.. ..+++++|+++.+++.|++++.. . ++++++++|+.+. +. ..+ ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 56699999999999999999862 35899999999999999998743 2 3589999997653 11 122 68999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
|++... ..+...+++++.++|+|||.+++.+..
T Consensus 152 V~~d~~----------~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 152 IFIDAD----------KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EEECSC----------GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EEECCC----------HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 998643 256678999999999999999986643
No 240
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.29 E-value=3.4e-12 Score=102.09 Aligned_cols=103 Identities=12% Similarity=0.178 Sum_probs=82.6
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCCeEEEccccCCC-CCC----CCCee
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMS-FFE----DESFD 117 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~---~~v~~~~~d~~~~~-~~~----~~~~D 117 (252)
.++.+|||+|||+|..+..+++. + ..+++++|+++.+++.+++++... .+++++++|+.+.. .+. .++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 45679999999999999999986 2 459999999999999999987532 47899999986542 111 16899
Q ss_pred EEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 118 AVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 118 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+|++... ......+++++.++|+|||.+++.+.
T Consensus 148 ~v~~d~~----------~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDAD----------KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSC----------STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCC----------HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9998643 24567889999999999999988653
No 241
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.28 E-value=1e-11 Score=109.81 Aligned_cols=113 Identities=16% Similarity=0.242 Sum_probs=85.9
Q ss_pred CCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
++.+|||+|||+|..+..+++. + ...|+++|+++.+++.+++++.. ..++.++++|+.+++....++||+|+++..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 6789999999999999999986 2 46899999999999999999853 347899999998865224568999998643
Q ss_pred hhhhc--CCCC------Ch-------hhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 125 LDSLM--CGTN------AP-------ISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 125 l~~~~--~~~~------~~-------~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
+.... ...+ .+ ....++++++.++|||||+++++++.
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 22110 0000 11 12457899999999999999998875
No 242
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.28 E-value=6.7e-12 Score=110.15 Aligned_cols=114 Identities=18% Similarity=0.208 Sum_probs=86.0
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~--~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
..++.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++++.. .. +.++++|+.+++....++||+|+++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLD 177 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEEC
Confidence 457789999999999999999976 235899999999999999999854 33 8899999887652235689999986
Q ss_pred cchhhhc--CCCC------Ch-------hhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 123 GTLDSLM--CGTN------AP-------ISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 123 ~~l~~~~--~~~~------~~-------~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
..+.-.. ...+ .+ .....+++++.++|+|||+|+.+++.
T Consensus 178 ~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 178 APCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp CCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 5432110 0000 01 12378899999999999999998875
No 243
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.28 E-value=2.4e-12 Score=107.55 Aligned_cols=105 Identities=11% Similarity=0.074 Sum_probs=74.6
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeC----CHHHHHHHHHhhcCC--CCCeEEEc-cccCCCCCCCCCeeEE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDI----SSVAIDMMKMKYEEI--PQLKYLQM-DVRDMSFFEDESFDAV 119 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~----s~~~i~~a~~~~~~~--~~v~~~~~-d~~~~~~~~~~~~D~v 119 (252)
++++.+|||+|||+|.++..+++. .+|+++|+ ++.+++... .... +++.++++ |+.+++ .++||+|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~---~~~fD~V 152 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIP---PERCDTL 152 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSC---CCCCSEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCC---cCCCCEE
Confidence 456789999999999999999988 48999999 554332111 1111 46888888 887664 4589999
Q ss_pred Eeccchh---hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 120 IDKGTLD---SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 120 ~~~~~l~---~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
+++...+ +. .+......++..+.++|+|||.+++..+..
T Consensus 153 ~sd~~~~~g~~~----~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 153 LCDIGESSPNPT----VEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp EECCCCCCSSHH----HHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred EECCccccCcch----hhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 9976643 22 000111257899999999999998877655
No 244
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.27 E-value=2.2e-11 Score=106.57 Aligned_cols=116 Identities=15% Similarity=0.140 Sum_probs=87.1
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCC-CCeEEEccccCCCC-CCCCCeeEEEecc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSF-FEDESFDAVIDKG 123 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~-~v~~~~~d~~~~~~-~~~~~~D~v~~~~ 123 (252)
..++.+|||+|||+|..+..+++.. ..+++++|+++.+++.+++++...+ +++++++|+.+.+. ++.++||+|+++.
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 3567799999999999999999875 3699999999999999999886433 57899999987642 3456899999865
Q ss_pred chhhhcC--CCCC------hh-------hHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 124 TLDSLMC--GTNA------PI-------SASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 124 ~l~~~~~--~~~~------~~-------~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
++..... ..+. +. ....+++++.++|+|||.++++++..
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 4321100 0000 11 12588999999999999999988653
No 245
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.21 E-value=9.9e-11 Score=97.09 Aligned_cols=80 Identities=15% Similarity=0.259 Sum_probs=69.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
+.++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.+++++...++++++++|+.+.+ +++.+||+|+++.+++
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~-~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVD-LNKLDFNKVVANLPYQ 125 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSC-GGGSCCSEEEEECCGG
T ss_pred CCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCC-cccCCccEEEEeCccc
Confidence 3467799999999999999999985 5999999999999999999876668999999999887 6667899999987765
Q ss_pred hh
Q 025475 127 SL 128 (252)
Q Consensus 127 ~~ 128 (252)
..
T Consensus 126 is 127 (295)
T 3gru_A 126 IS 127 (295)
T ss_dssp GH
T ss_pred cc
Confidence 43
No 246
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.21 E-value=1e-10 Score=97.48 Aligned_cols=78 Identities=23% Similarity=0.337 Sum_probs=61.8
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
..++.+|||+|||+|.++..+++.+ .+++++|+++.+++.+++++. ..++++++++|+.+.+ + .+||+|+++.+
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~-~--~~~D~Vv~n~p 115 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV-F--PKFDVCTANIP 115 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC-C--CCCSEEEEECC
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC-c--ccCCEEEEcCC
Confidence 3466799999999999999999885 499999999999999999874 3357999999998876 3 37999999877
Q ss_pred hhhh
Q 025475 125 LDSL 128 (252)
Q Consensus 125 l~~~ 128 (252)
++..
T Consensus 116 y~~~ 119 (299)
T 2h1r_A 116 YKIS 119 (299)
T ss_dssp GGGH
T ss_pred cccc
Confidence 6644
No 247
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.20 E-value=4.3e-11 Score=101.12 Aligned_cols=113 Identities=22% Similarity=0.202 Sum_probs=81.9
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC----------CCCeEEEccccCCCCC---CCC
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI----------PQLKYLQMDVRDMSFF---EDE 114 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~----------~~v~~~~~d~~~~~~~---~~~ 114 (252)
+.+.+||++|||+|..+..+++++..++++||+++.+++.|++++... ++++++.+|+.++..- ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 356799999999999999999987668999999999999999997521 2689999999886411 356
Q ss_pred CeeEEEeccchhhhcCCCCChhhHHHHHHHH----HHcccCCcEEEEEEcC
Q 025475 115 SFDAVIDKGTLDSLMCGTNAPISASQMLGEV----SRLLKPGGIYMLITYG 161 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~----~~~L~~gG~l~i~~~~ 161 (252)
+||+|++..+-..... .+.......+++.+ .++|+|||.+++....
T Consensus 267 ~fDvII~D~~d~P~~~-~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 267 EFDYVINDLTAVPIST-SPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CEEEEEEECCSSCCCC-C----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCc-CchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 8999999754201100 00001224455555 9999999999987643
No 248
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.19 E-value=3.7e-11 Score=104.74 Aligned_cols=118 Identities=19% Similarity=0.268 Sum_probs=86.8
Q ss_pred cchhhHHHHHhhCC--CCCcEEEEcccCcHhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC
Q 025475 35 RYSALRPFVRKYIP--TSSRVLMVGCGNALMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF 110 (252)
Q Consensus 35 ~~~~l~~~~~~~~~--~~~~vLD~G~G~G~~~~~l~~~--~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~ 110 (252)
....+.+.+...+. ++.+|||+|||+|.++..+++. ...+++|+|+++.+++.| .+++++++|+.+..
T Consensus 23 TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------~~~~~~~~D~~~~~- 94 (421)
T 2ih2_A 23 TPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------PWAEGILADFLLWE- 94 (421)
T ss_dssp CCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------TTEEEEESCGGGCC-
T ss_pred CCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------CCCcEEeCChhhcC-
Confidence 34556666666654 4569999999999999999875 345999999999988766 36789999998875
Q ss_pred CCCCCeeEEEeccchhhhcCCC-----CChh-----------------hHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 111 FEDESFDAVIDKGTLDSLMCGT-----NAPI-----------------SASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 111 ~~~~~~D~v~~~~~l~~~~~~~-----~~~~-----------------~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
..++||+|+++.++....... ...+ ....++..+.++|++||.++++...
T Consensus 95 -~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 95 -PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp -CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred -ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 456899999987764321000 0011 1236789999999999999888754
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.17 E-value=1.5e-10 Score=100.87 Aligned_cols=107 Identities=20% Similarity=0.290 Sum_probs=80.6
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
+.++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.|++++.. .. ++++++|+.+.. .. +||+|+++..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~--~~-~fD~Vv~dPP 362 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS--VK-GFDTVIVDPP 362 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC--CT-TCSEEEECCC
T ss_pred cCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC--cc-CCCEEEEcCC
Confidence 5677899999999999999999885 4999999999999999998753 33 899999998875 22 7999999765
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhhhhhhc
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHL 170 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~ 170 (252)
.... ...+++.+. .|+|+|.++++. .|....+.+
T Consensus 363 r~g~---------~~~~~~~l~-~l~p~givyvsc--~p~tlarDl 396 (425)
T 2jjq_A 363 RAGL---------HPRLVKRLN-REKPGVIVYVSC--NPETFARDV 396 (425)
T ss_dssp TTCS---------CHHHHHHHH-HHCCSEEEEEES--CHHHHHHHH
T ss_pred ccch---------HHHHHHHHH-hcCCCcEEEEEC--ChHHHHhHH
Confidence 3222 123444444 489999998864 344433333
No 250
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.15 E-value=2e-10 Score=100.90 Aligned_cols=123 Identities=13% Similarity=0.136 Sum_probs=89.5
Q ss_pred chhhHHHHHhhCC--CCCcEEEEcccCcHhHHHHHHc--------------CCCcEEEEeCCHHHHHHHHHhhc--CCC-
Q 025475 36 YSALRPFVRKYIP--TSSRVLMVGCGNALMSEDMVKD--------------GYEDIVNIDISSVAIDMMKMKYE--EIP- 96 (252)
Q Consensus 36 ~~~l~~~~~~~~~--~~~~vLD~G~G~G~~~~~l~~~--------------~~~~v~~vD~s~~~i~~a~~~~~--~~~- 96 (252)
...+.+.+.+.+. ++.+|||+|||+|.++..+++. ...+++|+|+++.+++.|+.++. +..
T Consensus 156 P~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~ 235 (445)
T 2okc_A 156 PRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT 235 (445)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred cHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCc
Confidence 3455556555533 4569999999999999888764 12479999999999999998763 222
Q ss_pred -CCeEEEccccCCCCCCCCCeeEEEeccchhhhcCCCC----------ChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 97 -QLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTN----------APISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 97 -~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~~~~----------~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
++.+.++|....+ ...+||+|+++.++........ .......++..+.++|+|||++.++.+
T Consensus 236 ~~~~i~~gD~l~~~--~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 236 DRSPIVCEDSLEKE--PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp SCCSEEECCTTTSC--CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEeeCCCCCCc--ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 6789999988765 2348999999998775411100 001124789999999999999988774
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.13 E-value=2.8e-12 Score=104.00 Aligned_cols=103 Identities=14% Similarity=0.246 Sum_probs=78.3
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCC-CCCeeEEEeccchh
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFE-DESFDAVIDKGTLD 126 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~-~~~~D~v~~~~~l~ 126 (252)
.++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++....++++++++|+.+.+ ++ +++| .|+++.+++
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~-~~~~~~f-~vv~n~Py~ 104 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQ-FPNKQRY-KIVGNIPYH 104 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTT-CCCSSEE-EEEEECCSS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcC-cccCCCc-EEEEeCCcc
Confidence 456699999999999999999986 5999999999999999887764457899999999887 55 3678 777775543
Q ss_pred hhcCCCCChhhHHH----------HH----HHHHHcccCCcEEEEEE
Q 025475 127 SLMCGTNAPISASQ----------ML----GEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 127 ~~~~~~~~~~~~~~----------~l----~~~~~~L~~gG~l~i~~ 159 (252)
.. ...... .+ +.+.++|+|||.+.+..
T Consensus 105 ~~------~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 105 LS------TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SC------HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cc------HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 21 112222 23 66889999999876643
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.12 E-value=1.2e-09 Score=88.28 Aligned_cols=85 Identities=13% Similarity=0.238 Sum_probs=67.1
Q ss_pred hHHHHHhhC--CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCC-CC
Q 025475 39 LRPFVRKYI--PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFED-ES 115 (252)
Q Consensus 39 l~~~~~~~~--~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~-~~ 115 (252)
+...+...+ .++.+|||+|||+|.++..+++.+ .+++++|+++.+++.+++++...++++++++|+.+.+ +++ ..
T Consensus 18 ~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~-~~~~~~ 95 (244)
T 1qam_A 18 NIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFK-FPKNQS 95 (244)
T ss_dssp HHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCC-CCSSCC
T ss_pred HHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCC-cccCCC
Confidence 334444433 456799999999999999999987 5999999999999999999866568999999999887 553 34
Q ss_pred eeEEEeccchh
Q 025475 116 FDAVIDKGTLD 126 (252)
Q Consensus 116 ~D~v~~~~~l~ 126 (252)
| .|+++.+++
T Consensus 96 ~-~vv~nlPy~ 105 (244)
T 1qam_A 96 Y-KIFGNIPYN 105 (244)
T ss_dssp C-EEEEECCGG
T ss_pred e-EEEEeCCcc
Confidence 5 566666554
No 253
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.12 E-value=2.6e-10 Score=92.79 Aligned_cols=77 Identities=13% Similarity=0.355 Sum_probs=65.2
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCC----CCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFE----DESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~----~~~~D~v~~~ 122 (252)
..++.+|||+|||+|.++..+++.+ .+++++|+++.+++.+++++...++++++++|+.+++ ++ .++|| |+++
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~-~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFD-FSSVKTDKPLR-VVGN 103 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCC-GGGSCCSSCEE-EEEE
T ss_pred CCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCC-HHHhccCCCeE-EEec
Confidence 3567799999999999999999986 5999999999999999999876668999999999876 32 35688 7777
Q ss_pred cchh
Q 025475 123 GTLD 126 (252)
Q Consensus 123 ~~l~ 126 (252)
.+++
T Consensus 104 lPY~ 107 (255)
T 3tqs_A 104 LPYN 107 (255)
T ss_dssp CCHH
T ss_pred CCcc
Confidence 6654
No 254
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.11 E-value=2.1e-10 Score=94.82 Aligned_cols=102 Identities=14% Similarity=0.097 Sum_probs=71.9
Q ss_pred CCCCCcEEEEcc------cCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCCCCCeE-EEccccCCCCCCCCCee
Q 025475 47 IPTSSRVLMVGC------GNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEIPQLKY-LQMDVRDMSFFEDESFD 117 (252)
Q Consensus 47 ~~~~~~vLD~G~------G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~-~~~d~~~~~~~~~~~~D 117 (252)
++++.+|||+|| |+|. ..+++. + ..+|+++|+++. + +++++ +++|+.+.+ + .++||
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---~~v~~~i~gD~~~~~-~-~~~fD 125 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---SDADSTLIGDCATVH-T-ANKWD 125 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---CSSSEEEESCGGGCC-C-SSCEE
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---CCCEEEEECccccCC-c-cCccc
Confidence 567889999999 4476 333333 4 358999999987 1 36889 999999876 3 36899
Q ss_pred EEEeccchhhhc----CCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 118 AVIDKGTLDSLM----CGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 118 ~v~~~~~l~~~~----~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
+|+++...+... ...........+++++.++|+|||.+++..+..+
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~ 175 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS 175 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 999975422110 0011123456899999999999999999776543
No 255
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.10 E-value=1.5e-09 Score=90.74 Aligned_cols=114 Identities=10% Similarity=0.046 Sum_probs=82.4
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCCCCCC--CCCeeEEE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFFE--DESFDAVI 120 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~--~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~~~~~--~~~~D~v~ 120 (252)
..++.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++++.. .+++++++|+.++.... ..+||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 457789999999999999999885 3468999999999999999998643 47999999998875211 15799999
Q ss_pred eccchhhhcCCCC----------Chhh-------HHHHHHHHHHcccCCcEEEEEEcC
Q 025475 121 DKGTLDSLMCGTN----------APIS-------ASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 121 ~~~~l~~~~~~~~----------~~~~-------~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
++....-...... +.++ ..++++.+.++|+ ||+|+.+++.
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 8654321100000 0011 2456788888887 9999888765
No 256
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.10 E-value=4.4e-10 Score=98.39 Aligned_cols=100 Identities=12% Similarity=0.224 Sum_probs=77.2
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCC-C--CCCCCeeEEEec
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMS-F--FEDESFDAVIDK 122 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~-~--~~~~~~D~v~~~ 122 (252)
.++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|+++... ..+++++++|+.+.. . +.+++||+|+++
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 45679999999999999999988 45999999999999999998853 347999999998742 1 345689999997
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
....-. . .+++.+.+ ++|++.++++.
T Consensus 364 PPr~g~-------~---~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 364 PARAGA-------A---GVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp CCTTCC-------H---HHHHHHHH-HCCSEEEEEES
T ss_pred CCCccH-------H---HHHHHHHh-cCCCeEEEEEC
Confidence 664433 2 34444443 68888887754
No 257
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.10 E-value=1.1e-09 Score=94.22 Aligned_cols=112 Identities=13% Similarity=0.182 Sum_probs=87.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCC---------------------------------------CcEEEEeCCHHHHHH
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGY---------------------------------------EDIVNIDISSVAIDM 87 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~---------------------------------------~~v~~vD~s~~~i~~ 87 (252)
..++..++|.+||+|.++..++..+. .+++|+|+++.|++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 35677999999999999998886531 359999999999999
Q ss_pred HHHhhcCCC---CCeEEEccccCCCCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccC--CcEEEEEEcCC
Q 025475 88 MKMKYEEIP---QLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKP--GGIYMLITYGD 162 (252)
Q Consensus 88 a~~~~~~~~---~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~--gG~l~i~~~~~ 162 (252)
|+.++...+ .++++++|+.+++ . ..+||+|+++.++..- .....+...+.+.+.+.|++ ||.+++.+...
T Consensus 272 Ar~Na~~~gl~~~I~~~~~D~~~l~-~-~~~fD~Iv~NPPYG~r---l~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 346 (384)
T 3ldg_A 272 ARKNAREVGLEDVVKLKQMRLQDFK-T-NKINGVLISNPPYGER---LLDDKAVDILYNEMGETFAPLKTWSQFILTNDT 346 (384)
T ss_dssp HHHHHHHTTCTTTEEEEECCGGGCC-C-CCCSCEEEECCCCTTT---TSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCT
T ss_pred HHHHHHHcCCCCceEEEECChHHCC-c-cCCcCEEEECCchhhc---cCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCH
Confidence 999985432 5899999999986 3 3589999999886532 12335677788888888876 99988888654
Q ss_pred h
Q 025475 163 P 163 (252)
Q Consensus 163 ~ 163 (252)
.
T Consensus 347 ~ 347 (384)
T 3ldg_A 347 D 347 (384)
T ss_dssp T
T ss_pred H
Confidence 4
No 258
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.08 E-value=5.9e-10 Score=96.23 Aligned_cols=113 Identities=15% Similarity=0.174 Sum_probs=84.6
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCC---------------------------------------CcEEEEeCCHHHHHH
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGY---------------------------------------EDIVNIDISSVAIDM 87 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~---------------------------------------~~v~~vD~s~~~i~~ 87 (252)
..++..|||++||+|.++..++..+. .+++|+|+++.|++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 35677999999999999988887532 359999999999999
Q ss_pred HHHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccC--CcEEEEEEcCC
Q 025475 88 MKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKP--GGIYMLITYGD 162 (252)
Q Consensus 88 a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~--gG~l~i~~~~~ 162 (252)
|+.++... .+++++++|+.+.+ . ..+||+|+++.++..- .........+.+.+.+.|++ ||.+++.+...
T Consensus 279 Ar~Na~~~gl~~~I~~~~~D~~~~~-~-~~~fD~Iv~NPPYg~r---l~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 279 AKQNAVEAGLGDLITFRQLQVADFQ-T-EDEYGVVVANPPYGER---LEDEEAVRQLYREMGIVYKRMPTWSVYVLTSYE 353 (393)
T ss_dssp HHHHHHHTTCTTCSEEEECCGGGCC-C-CCCSCEEEECCCCCCS---HHHHHHHHHHHHHHHHHHHTCTTCEEEEEECCT
T ss_pred HHHHHHHcCCCCceEEEECChHhCC-C-CCCCCEEEECCCCccc---cCCchhHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 99998542 25999999999986 3 4589999999875421 01124456666667677766 89888887554
Q ss_pred hh
Q 025475 163 PK 164 (252)
Q Consensus 163 ~~ 164 (252)
..
T Consensus 354 ~l 355 (393)
T 3k0b_A 354 LF 355 (393)
T ss_dssp TH
T ss_pred HH
Confidence 43
No 259
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.08 E-value=4.2e-10 Score=92.20 Aligned_cols=92 Identities=13% Similarity=0.156 Sum_probs=72.0
Q ss_pred eeccchhhHHHHHhh-CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC
Q 025475 32 WYQRYSALRPFVRKY-IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF 110 (252)
Q Consensus 32 ~~~~~~~l~~~~~~~-~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~ 110 (252)
++.....+..++... +.++ +|||+|||+|.++..+++.+ .+|+++|+++.+++.+++++.. .+++++++|+.+.+
T Consensus 29 fL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~-~~v~vi~~D~l~~~- 104 (271)
T 3fut_A 29 FLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSG-LPVRLVFQDALLYP- 104 (271)
T ss_dssp EECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTT-SSEEEEESCGGGSC-
T ss_pred ccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCC-CCEEEEECChhhCC-
Confidence 333333344444433 4567 99999999999999999997 5999999999999999999864 58999999999886
Q ss_pred CCC-CCeeEEEeccchhh
Q 025475 111 FED-ESFDAVIDKGTLDS 127 (252)
Q Consensus 111 ~~~-~~~D~v~~~~~l~~ 127 (252)
+++ ..+|.|++|.+++-
T Consensus 105 ~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 105 WEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp GGGSCTTEEEEEEECSSC
T ss_pred hhhccCccEEEecCcccc
Confidence 443 26899999887654
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.07 E-value=6.4e-10 Score=95.79 Aligned_cols=111 Identities=18% Similarity=0.220 Sum_probs=85.8
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCC---------------------------------------CcEEEEeCCHHHHHHH
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGY---------------------------------------EDIVNIDISSVAIDMM 88 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~---------------------------------------~~v~~vD~s~~~i~~a 88 (252)
.++.+|||++||+|.++..++..+. .+|+|+|+++.+++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 4667999999999999999877631 3699999999999999
Q ss_pred HHhhcCC---CCCeEEEccccCCCCCCCCCeeEEEeccchhh-hcCCCCChhhHHHHHHHHHHcccC--CcEEEEEEcCC
Q 025475 89 KMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS-LMCGTNAPISASQMLGEVSRLLKP--GGIYMLITYGD 162 (252)
Q Consensus 89 ~~~~~~~---~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~-~~~~~~~~~~~~~~l~~~~~~L~~--gG~l~i~~~~~ 162 (252)
+.++... .++++.++|+.+++ ...+||+|+++.++.. + ...+....+.+++.+.|++ ||.+++.+...
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~--~~~~~D~Iv~NPPyg~rl----~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 347 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFK--SEDEFGFIITNPPYGERL----EDKDSVKQLYKELGYAFRKLKNWSYYLITSYE 347 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCC--CSCBSCEEEECCCCCCSH----HHHHHHHHHHHHHHHHHHTSBSCEEEEEESCT
T ss_pred HHHHHHcCCCCceEEEECChhhcC--cCCCCcEEEECCCCcCcc----CCHHHHHHHHHHHHHHHhhCCCCEEEEEECCH
Confidence 9998532 26899999999986 3458999999988642 2 1124566777777777776 88888887554
Q ss_pred hh
Q 025475 163 PK 164 (252)
Q Consensus 163 ~~ 164 (252)
..
T Consensus 348 ~l 349 (385)
T 3ldu_A 348 DF 349 (385)
T ss_dssp TH
T ss_pred HH
Confidence 43
No 261
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.04 E-value=3.7e-10 Score=96.88 Aligned_cols=108 Identities=9% Similarity=0.258 Sum_probs=78.6
Q ss_pred HHHHhhCC-CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCC-CCC---
Q 025475 41 PFVRKYIP-TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSF-FED--- 113 (252)
Q Consensus 41 ~~~~~~~~-~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~-~~~--- 113 (252)
..+...+. .+.+|||+|||+|.++..++.. ..+|+++|+++.+++.|+++++. ..+++++++|+.+... ...
T Consensus 204 ~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~ 282 (369)
T 3bt7_A 204 EWALDVTKGSKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVRE 282 (369)
T ss_dssp HHHHHHTTTCCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCC
T ss_pred HHHHHHhhcCCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccc
Confidence 33444433 3568999999999999998875 45999999999999999998854 3478999999876421 111
Q ss_pred -----------CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 114 -----------ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 114 -----------~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
.+||+|+++....- +..++.+.|+++|.++.++++.
T Consensus 283 ~~~l~~~~~~~~~fD~Vv~dPPr~g-------------~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 283 FNRLQGIDLKSYQCETIFVDPPRSG-------------LDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp CTTGGGSCGGGCCEEEEEECCCTTC-------------CCHHHHHHHTTSSEEEEEESCH
T ss_pred cccccccccccCCCCEEEECcCccc-------------cHHHHHHHHhCCCEEEEEECCH
Confidence 37999998654221 2344566677889888887653
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.03 E-value=1.8e-10 Score=98.96 Aligned_cols=100 Identities=17% Similarity=0.057 Sum_probs=79.1
Q ss_pred CCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC-----------------CCCeEEEccccCCCC
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI-----------------PQLKYLQMDVRDMSF 110 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~-----------------~~v~~~~~d~~~~~~ 110 (252)
++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++.. .+++++++|+.+...
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 5779999999999999999987 5558999999999999999988533 248899999877531
Q ss_pred CCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 111 FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 111 ~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
...++||+|+++.. -....+++.+.+.|++||.++++.
T Consensus 127 ~~~~~fD~I~lDP~-----------~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPF-----------GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCS-----------SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCC-----------CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 12357999997542 122567888899999999887764
No 263
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.03 E-value=1.9e-10 Score=98.91 Aligned_cols=100 Identities=21% Similarity=0.174 Sum_probs=79.5
Q ss_pred CCCcEEEEcccCcHhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCC--CC--CeEEEccccCCCC-CCCCCeeEEEe
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEI--PQ--LKYLQMDVRDMSF-FEDESFDAVID 121 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~--~~~~v~~vD~s~~~i~~a~~~~~~~--~~--v~~~~~d~~~~~~-~~~~~~D~v~~ 121 (252)
++.+|||++||+|.++..++.. |..+|+++|+++.+++.++++++.+ .+ ++++++|+.+... ...++||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 4679999999999999999985 4468999999999999999998643 23 8999999877531 12457999998
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+. . .....++..+.++|++||.|+++.
T Consensus 132 DP-~----------g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP-F----------GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC-S----------SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-C----------cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 76 1 112457888889999999887765
No 264
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.02 E-value=4.4e-09 Score=86.58 Aligned_cols=110 Identities=21% Similarity=0.379 Sum_probs=86.7
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhc-------CCCCCeEEEccccCCCCCCCCCeeE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYE-------EIPQLKYLQMDVRDMSFFEDESFDA 118 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~-------~~~~v~~~~~d~~~~~~~~~~~~D~ 118 (252)
.+.+.+||-+|.|.|..++.+++.. ..+++.||+++.+++.+++.+. +.++++++.+|...+.....++||+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 4566799999999999999999884 5689999999999999999863 2468999999999876455678999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+...+=. . +.+..-.-..+++.+++.|+|||++++..
T Consensus 161 Ii~D~~dp-~--~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 161 IISDCTDP-I--GPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEESCCCC-C--CTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEeCCCc-C--CCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 99864311 1 11111233678999999999999999864
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.89 E-value=2.3e-09 Score=96.22 Aligned_cols=125 Identities=10% Similarity=-0.004 Sum_probs=88.1
Q ss_pred chhhHHHHHhhCC--CCCcEEEEcccCcHhHHHHHHc----C---------------CCcEEEEeCCHHHHHHHHHhhc-
Q 025475 36 YSALRPFVRKYIP--TSSRVLMVGCGNALMSEDMVKD----G---------------YEDIVNIDISSVAIDMMKMKYE- 93 (252)
Q Consensus 36 ~~~l~~~~~~~~~--~~~~vLD~G~G~G~~~~~l~~~----~---------------~~~v~~vD~s~~~i~~a~~~~~- 93 (252)
...+..++...+. ++.+|+|.|||+|.++..+++. + ...++|+|+++.+++.|+.++.
T Consensus 154 P~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l 233 (541)
T 2ar0_A 154 PRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL 233 (541)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH
Confidence 3445555555433 4569999999999998887754 1 1379999999999999998763
Q ss_pred -CCCC-----CeEEEccccCCCCCCCCCeeEEEeccchhhhcCC-------CCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 94 -EIPQ-----LKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCG-------TNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 94 -~~~~-----v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~~-------~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+... +.+.++|....+.....+||+|+++.++...... .+.......++..+.+.|++||++.++.+
T Consensus 234 ~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 234 HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 2223 7889999866431235689999999887643110 01012234789999999999999888774
No 266
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.88 E-value=5e-09 Score=84.89 Aligned_cols=75 Identities=13% Similarity=0.269 Sum_probs=60.9
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCC--CCeeEEEeccch
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFED--ESFDAVIDKGTL 125 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~--~~~D~v~~~~~l 125 (252)
.++.+|||+|||+|.++..+++.+..+++++|+++.+++.++++ ...+++++++|+.+++ +++ +.+ .|+++.++
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~--~~~~v~~i~~D~~~~~-~~~~~~~~-~vv~NlPy 105 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI--GDERLEVINEDASKFP-FCSLGKEL-KVVGNLPY 105 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS--CCTTEEEECSCTTTCC-GGGSCSSE-EEEEECCT
T ss_pred CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc--cCCCeEEEEcchhhCC-hhHccCCc-EEEEECch
Confidence 46679999999999999999998656999999999999999988 3458999999999876 432 233 66666655
Q ss_pred h
Q 025475 126 D 126 (252)
Q Consensus 126 ~ 126 (252)
+
T Consensus 106 ~ 106 (249)
T 3ftd_A 106 N 106 (249)
T ss_dssp T
T ss_pred h
Confidence 4
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.87 E-value=1.9e-09 Score=87.77 Aligned_cols=110 Identities=9% Similarity=-0.029 Sum_probs=75.6
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCH-------HHHHHHHHhhcCC---CCCeEEEccccCCC-CCCC--C
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISS-------VAIDMMKMKYEEI---PQLKYLQMDVRDMS-FFED--E 114 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~-------~~i~~a~~~~~~~---~~v~~~~~d~~~~~-~~~~--~ 114 (252)
.++.+|||+|||+|.++..++..+. +|+++|+++ .+++.++++.+.. ++++++++|+.+.. .+++ +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 3557999999999999999999864 899999999 9999998776321 24999999998752 1333 6
Q ss_pred CeeEEEeccchhhhcCCC-------------CChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 115 SFDAVIDKGTLDSLMCGT-------------NAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~-------------~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+||+|+++..+.+..-+. ....+...++..+.++.+. .+++...
T Consensus 161 ~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~--~vvvk~p 217 (258)
T 2r6z_A 161 KPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKK--RVVVKRP 217 (258)
T ss_dssp CCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSS--EEEEEEE
T ss_pred CccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCc--EEEEEcC
Confidence 899999988766531000 0112445666677776643 4555443
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.86 E-value=6.7e-09 Score=85.48 Aligned_cols=92 Identities=10% Similarity=0.136 Sum_probs=66.4
Q ss_pred eeccchhhHHHHHhh-CCCCCcEEEEcccCcHhHHHHHHcCCC---cEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccC
Q 025475 32 WYQRYSALRPFVRKY-IPTSSRVLMVGCGNALMSEDMVKDGYE---DIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD 107 (252)
Q Consensus 32 ~~~~~~~l~~~~~~~-~~~~~~vLD~G~G~G~~~~~l~~~~~~---~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~ 107 (252)
+......+..++... ..++.+|||+|||+|.++..+++.+.. +++++|+++.+++.++++. .++++++++|+.+
T Consensus 24 fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 24 FLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--GELLELHAGDALT 101 (279)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--GGGEEEEESCGGG
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--CCCcEEEECChhc
Confidence 333333334444333 456779999999999999999988541 2999999999999999884 4579999999998
Q ss_pred CCCCCCC------CeeEEEeccchh
Q 025475 108 MSFFEDE------SFDAVIDKGTLD 126 (252)
Q Consensus 108 ~~~~~~~------~~D~v~~~~~l~ 126 (252)
++ +++- ..+.|++|..++
T Consensus 102 ~~-~~~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 102 FD-FGSIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp CC-GGGGSCSSSSCCEEEEEECCHH
T ss_pred CC-hhHhcccccCCceEEEEccCcc
Confidence 76 3321 235677776654
No 269
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.86 E-value=1.8e-08 Score=78.59 Aligned_cols=112 Identities=11% Similarity=-0.026 Sum_probs=79.1
Q ss_pred eeccchhhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-----CCCeEEEcccc
Q 025475 32 WYQRYSALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-----PQLKYLQMDVR 106 (252)
Q Consensus 32 ~~~~~~~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~-----~~v~~~~~d~~ 106 (252)
|..-.+...+++...+.+..+|||+||| ..+..+++...++|+.+|.+++..+.++++++.. .+++++.+|+.
T Consensus 13 ~~~v~~~~~~~L~~~l~~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~ 90 (202)
T 3cvo_A 13 ELTMPPAEAEALRMAYEEAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIG 90 (202)
T ss_dssp CCCSCHHHHHHHHHHHHHCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCS
T ss_pred CccCCHHHHHHHHHHhhCCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCch
Confidence 3333333445555555567799999984 6777777752469999999999999999988643 36899999965
Q ss_pred CC---------------CC-------C-CCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEE
Q 025475 107 DM---------------SF-------F-EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYML 157 (252)
Q Consensus 107 ~~---------------~~-------~-~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i 157 (252)
+. +. . ..++||+|++..- .....+..+.+.|++||++++
T Consensus 91 ~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~------------k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 91 PTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR------------FRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp SBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS------------SHHHHHHHHHHHCSSCEEEEE
T ss_pred hhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCC------------CchhHHHHHHHhcCCCeEEEE
Confidence 42 10 1 2368999998642 224566667799999999965
No 270
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.85 E-value=3.5e-09 Score=85.94 Aligned_cols=76 Identities=16% Similarity=0.133 Sum_probs=60.3
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCc--EEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCC-----CCeeEE
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYED--IVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFED-----ESFDAV 119 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~--v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~-----~~~D~v 119 (252)
+.++.+|||+|||+|.++. +.. + .+ ++++|+++.+++.+++++...++++++++|+.+.+ +++ +..|.|
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~-~~~~~~~~~~~~~v 94 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFN-FGELAEKMGQPLRV 94 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCC-HHHHHHHHTSCEEE
T ss_pred CCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCC-HHHhhcccCCceEE
Confidence 4566799999999999999 654 3 36 99999999999999998765458999999998875 322 235788
Q ss_pred Eeccchh
Q 025475 120 IDKGTLD 126 (252)
Q Consensus 120 ~~~~~l~ 126 (252)
+++.+++
T Consensus 95 vsNlPY~ 101 (252)
T 1qyr_A 95 FGNLPYN 101 (252)
T ss_dssp EEECCTT
T ss_pred EECCCCC
Confidence 8877654
No 271
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.83 E-value=3.1e-09 Score=91.61 Aligned_cols=81 Identities=9% Similarity=0.074 Sum_probs=65.8
Q ss_pred hhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC----CCCCeEEEccccCC-CCCCCCCeeEE
Q 025475 45 KYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE----IPQLKYLQMDVRDM-SFFEDESFDAV 119 (252)
Q Consensus 45 ~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~----~~~v~~~~~d~~~~-~~~~~~~~D~v 119 (252)
..+.++.+|||+|||+|..+..++..+. +|+++|+++.+++.++.++.. ..+++++++|+.+. +....++||+|
T Consensus 89 ~~l~~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV 167 (410)
T 3ll7_A 89 RFIREGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYI 167 (410)
T ss_dssp GGSCTTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEE
T ss_pred HhcCCCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEE
Confidence 3455578999999999999999988864 999999999999999999863 34799999999885 21123579999
Q ss_pred Eeccchh
Q 025475 120 IDKGTLD 126 (252)
Q Consensus 120 ~~~~~l~ 126 (252)
+++....
T Consensus 168 ~lDPPrr 174 (410)
T 3ll7_A 168 YVDPARR 174 (410)
T ss_dssp EECCEEC
T ss_pred EECCCCc
Confidence 9987643
No 272
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.81 E-value=6.6e-09 Score=94.02 Aligned_cols=98 Identities=12% Similarity=0.186 Sum_probs=68.9
Q ss_pred CcEEEEcccCcHhHHHHHHc---CC--CcEEEEeCCHHHHHHHHHhhcC---CCCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 51 SRVLMVGCGNALMSEDMVKD---GY--EDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~---~~--~~v~~vD~s~~~i~~a~~~~~~---~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
..|||+|||+|.+....+.. +. .+|++||-|+.+. .+++..+. .+.|+++++|++++. .+ +++|+||+-
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~~~v~~N~~~dkVtVI~gd~eev~-LP-EKVDIIVSE 435 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTLENWQFEEWGSQVTVVSSDMREWV-AP-EKADIIVSE 435 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHHHHHHHHTTGGGEEEEESCTTTCC-CS-SCEEEEECC
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHHHHHHhccCCCeEEEEeCcceecc-CC-cccCEEEEE
Confidence 47999999999985555544 22 2789999998554 45544432 237999999999986 44 689999985
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEE
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYM 156 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 156 (252)
..=..+ . + +....++....+.|||||.++
T Consensus 436 wMG~fL-l---~-E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFA-D---N-ELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTB-G---G-GCHHHHHHHHGGGEEEEEEEE
T ss_pred cCcccc-c---c-cCCHHHHHHHHHhcCCCcEEc
Confidence 542222 1 1 333467888889999999853
No 273
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.81 E-value=3.2e-08 Score=88.64 Aligned_cols=127 Identities=10% Similarity=0.063 Sum_probs=89.4
Q ss_pred cchhhHHHHHhhCC------CCCcEEEEcccCcHhHHHHHHc----CCCcEEEEeCCHHHHHHHHHhhc--CC--CCCeE
Q 025475 35 RYSALRPFVRKYIP------TSSRVLMVGCGNALMSEDMVKD----GYEDIVNIDISSVAIDMMKMKYE--EI--PQLKY 100 (252)
Q Consensus 35 ~~~~l~~~~~~~~~------~~~~vLD~G~G~G~~~~~l~~~----~~~~v~~vD~s~~~i~~a~~~~~--~~--~~v~~ 100 (252)
....+..++...+. ++.+|+|.+||+|.+...+++. +...++|+|+++.++..|+.++. +. .++.+
T Consensus 201 TP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I 280 (542)
T 3lkd_A 201 TPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFL 280 (542)
T ss_dssp CCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred ccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccce
Confidence 34555555554432 4569999999999998888775 24589999999999999998763 22 25678
Q ss_pred EEccccCC--CCCCCCCeeEEEeccchhhhc--------------CC-CCChh-hHHHHHHHHHHccc-CCcEEEEEEcC
Q 025475 101 LQMDVRDM--SFFEDESFDAVIDKGTLDSLM--------------CG-TNAPI-SASQMLGEVSRLLK-PGGIYMLITYG 161 (252)
Q Consensus 101 ~~~d~~~~--~~~~~~~~D~v~~~~~l~~~~--------------~~-~~~~~-~~~~~l~~~~~~L~-~gG~l~i~~~~ 161 (252)
.++|.... +.....+||+|++++++..-. ++ .++.. .--.++..+.+.|+ +||++.++.+.
T Consensus 281 ~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 281 HNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp EESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred EecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 99998765 424567899999998865210 00 00000 11258999999999 99998887754
No 274
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.81 E-value=2.4e-08 Score=92.26 Aligned_cols=111 Identities=9% Similarity=0.079 Sum_probs=80.2
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-------------------------------------------CCcEEEEeCCHHH
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-------------------------------------------YEDIVNIDISSVA 84 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-------------------------------------------~~~v~~vD~s~~~ 84 (252)
.++..+||.+||+|.++..++..+ ..+++|+|+++.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 466799999999999998887642 1379999999999
Q ss_pred HHHHHHhhcCCC---CCeEEEccccCCCC-CCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHH---HcccCCcEEEE
Q 025475 85 IDMMKMKYEEIP---QLKYLQMDVRDMSF-FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVS---RLLKPGGIYML 157 (252)
Q Consensus 85 i~~a~~~~~~~~---~v~~~~~d~~~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~---~~L~~gG~l~i 157 (252)
++.|+.++...+ .+++.++|+.++.. ...++||+|++|.++..- .........+.+.+. +.+.+||.+++
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~R---lg~~~~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGER---LDSEPALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC------CCHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCcccc---ccchhHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 999999985432 48999999988741 223489999999886431 112234444554444 44457999999
Q ss_pred EEcC
Q 025475 158 ITYG 161 (252)
Q Consensus 158 ~~~~ 161 (252)
.+..
T Consensus 346 lt~~ 349 (703)
T 3v97_A 346 FSAS 349 (703)
T ss_dssp EESC
T ss_pred EeCC
Confidence 8754
No 275
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.78 E-value=5.1e-09 Score=87.08 Aligned_cols=77 Identities=17% Similarity=0.261 Sum_probs=63.5
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC-CCCeEEEccccCCCC-C---CCCCeeEEEe
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSF-F---EDESFDAVID 121 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~-~~v~~~~~d~~~~~~-~---~~~~~D~v~~ 121 (252)
.++.+|||+|||+|.++..+++.. ..+++++|+|+.|++.|++++... .+++++++|+.+++. + ...+||.|++
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~ 104 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILM 104 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEE
Confidence 467799999999999999999874 459999999999999999998653 589999999987641 1 1257999998
Q ss_pred ccc
Q 025475 122 KGT 124 (252)
Q Consensus 122 ~~~ 124 (252)
+..
T Consensus 105 D~g 107 (301)
T 1m6y_A 105 DLG 107 (301)
T ss_dssp ECS
T ss_pred cCc
Confidence 654
No 276
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.78 E-value=9.3e-09 Score=83.18 Aligned_cols=119 Identities=12% Similarity=0.083 Sum_probs=74.9
Q ss_pred hHHHHHhh-CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCe
Q 025475 39 LRPFVRKY-IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESF 116 (252)
Q Consensus 39 l~~~~~~~-~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 116 (252)
|.++..+. ++++.+|||+|||+|.++..+++. +...++++|++.++............++.....++.... +..+++
T Consensus 63 L~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~-l~~~~~ 141 (277)
T 3evf_A 63 LRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHR-LEPVKC 141 (277)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTT-SCCCCC
T ss_pred HHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehh-cCCCCc
Confidence 44444443 567779999999999999998876 555788899874421000000000013444555553333 667789
Q ss_pred eEEEeccchhhhcCCCCChhhH--HHHHHHHHHcccCC-cEEEEEEcC
Q 025475 117 DAVIDKGTLDSLMCGTNAPISA--SQMLGEVSRLLKPG-GIYMLITYG 161 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~--~~~l~~~~~~L~~g-G~l~i~~~~ 161 (252)
|+|++....+ . +...-+.. -.+++.+.++|+|| |.+++..+.
T Consensus 142 DlVlsD~apn-s--G~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 142 DTLLCDIGES-S--SSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp SEEEECCCCC-C--SCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred cEEEecCccC-c--CchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 9999987544 1 00000222 23578889999999 999998887
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.77 E-value=5.4e-09 Score=94.68 Aligned_cols=101 Identities=16% Similarity=0.176 Sum_probs=72.5
Q ss_pred CCcEEEEcccCcHhHHHHHHc----C----------CCcEEEEeCCHHHHHHHHHhhc-CC-CCCeEEEccccCCCCCC-
Q 025475 50 SSRVLMVGCGNALMSEDMVKD----G----------YEDIVNIDISSVAIDMMKMKYE-EI-PQLKYLQMDVRDMSFFE- 112 (252)
Q Consensus 50 ~~~vLD~G~G~G~~~~~l~~~----~----------~~~v~~vD~s~~~i~~a~~~~~-~~-~~v~~~~~d~~~~~~~~- 112 (252)
+..|||+|||+|.++...+.. + ..+|++||-++.++..++.... +. +.|+++.+|++++. .+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~-lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLP-GIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHH-HHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcc-ccc
Confidence 458999999999997543222 1 2389999999987766665543 22 36999999999986 42
Q ss_pred ----CCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEE
Q 025475 113 ----DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYM 156 (252)
Q Consensus 113 ----~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 156 (252)
.+++|+||+-..=... ..+....++..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl-----~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFG-----DNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTB-----GGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEecccccc-----chhccHHHHHHHHHhCCCCcEEE
Confidence 5789999986542222 22445567888889999999854
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.72 E-value=4.5e-08 Score=87.79 Aligned_cols=128 Identities=13% Similarity=0.027 Sum_probs=87.6
Q ss_pred eccchhhHHHHHhhCCC-CCcEEEEcccCcHhHHHHHHc--------C--------CCcEEEEeCCHHHHHHHHHhhcC-
Q 025475 33 YQRYSALRPFVRKYIPT-SSRVLMVGCGNALMSEDMVKD--------G--------YEDIVNIDISSVAIDMMKMKYEE- 94 (252)
Q Consensus 33 ~~~~~~l~~~~~~~~~~-~~~vLD~G~G~G~~~~~l~~~--------~--------~~~v~~vD~s~~~i~~a~~~~~~- 94 (252)
+.....+.+++...+.+ ..+|+|.+||+|.+...+++. . ...++|+|+++.+++.|+.++.-
T Consensus 227 fyTP~~Vv~lmv~ll~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~ 306 (544)
T 3khk_A 227 YYTPKSIVTLIVEMLEPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR 306 (544)
T ss_dssp TCCCHHHHHHHHHHHCCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT
T ss_pred EeCCHHHHHHHHHHHhcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh
Confidence 33455666666665443 239999999999988877542 0 24799999999999999987632
Q ss_pred -C-CCCeEEEccccCCCCCCCCCeeEEEeccchhhhcC-------------C--------CCCh-hhHHHHHHHHHHccc
Q 025475 95 -I-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMC-------------G--------TNAP-ISASQMLGEVSRLLK 150 (252)
Q Consensus 95 -~-~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~~-------------~--------~~~~-~~~~~~l~~~~~~L~ 150 (252)
. .++.+.++|....+.....+||+|+++.++..-.. + .++. ..--.++..+.+.|+
T Consensus 307 gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk 386 (544)
T 3khk_A 307 GIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLA 386 (544)
T ss_dssp TCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEE
T ss_pred CCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhc
Confidence 1 13444778876554345678999999988763100 0 1111 111258899999999
Q ss_pred CCcEEEEEEc
Q 025475 151 PGGIYMLITY 160 (252)
Q Consensus 151 ~gG~l~i~~~ 160 (252)
+||++.++.+
T Consensus 387 ~gGr~aiVlP 396 (544)
T 3khk_A 387 PTGSMALLLA 396 (544)
T ss_dssp EEEEEEEEEE
T ss_pred cCceEEEEec
Confidence 9999888774
No 279
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.71 E-value=6.2e-09 Score=84.57 Aligned_cols=79 Identities=8% Similarity=-0.010 Sum_probs=60.3
Q ss_pred CCC--CcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc-------C---C-CCCeEEEccccCCCCCCCC
Q 025475 48 PTS--SRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE-------E---I-PQLKYLQMDVRDMSFFEDE 114 (252)
Q Consensus 48 ~~~--~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~-------~---~-~~v~~~~~d~~~~~~~~~~ 114 (252)
.++ .+|||+|||+|..+..++..|. +|+++|+++.+...++.+++ . . .+++++++|..++.....+
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~ 163 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITP 163 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSS
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcc
Confidence 455 7999999999999999999876 89999999987655555432 1 1 3589999999875312234
Q ss_pred CeeEEEeccchhh
Q 025475 115 SFDAVIDKGTLDS 127 (252)
Q Consensus 115 ~~D~v~~~~~l~~ 127 (252)
+||+|+++..+.+
T Consensus 164 ~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 164 RPQVVYLDPMFPH 176 (258)
T ss_dssp CCSEEEECCCCCC
T ss_pred cCCEEEEcCCCCC
Confidence 7999999987654
No 280
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.71 E-value=4.2e-08 Score=83.35 Aligned_cols=116 Identities=17% Similarity=0.158 Sum_probs=85.3
Q ss_pred hCCCCCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC--------CCCCeEEEccccCCCCCCCCCe
Q 025475 46 YIPTSSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE--------IPQLKYLQMDVRDMSFFEDESF 116 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~--------~~~v~~~~~d~~~~~~~~~~~~ 116 (252)
...++.+|||++||.|.-+..+++.+ ...++++|+++.-++..++++.. ..++.+...|...+.....+.|
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 35678899999999999999998875 34799999999988888877642 1367888888877653456789
Q ss_pred eEEEeccchhh---h-cCCCC------Chh-------hHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 117 DAVIDKGTLDS---L-MCGTN------API-------SASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 117 D~v~~~~~l~~---~-~~~~~------~~~-------~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
|.|++.....- . ....+ ... ...++|..+.++|||||+|+.++++
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 99998765331 0 00000 111 2357888999999999999998876
No 281
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.67 E-value=1.5e-07 Score=86.73 Aligned_cols=113 Identities=12% Similarity=0.031 Sum_probs=78.2
Q ss_pred CCCcEEEEcccCcHhHHHHHHcC----CCcEEEEeCCHHHHHHH--HHhhcC------CCCCeEEEccccCCCCCCCCCe
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDG----YEDIVNIDISSVAIDMM--KMKYEE------IPQLKYLQMDVRDMSFFEDESF 116 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~----~~~v~~vD~s~~~i~~a--~~~~~~------~~~v~~~~~d~~~~~~~~~~~~ 116 (252)
++.+|||.|||+|.++..++... ..+++|+|+++.+++.| +.+... .....+...|+.+.......+|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 56799999999999999998763 24799999999999999 444322 1123566666665432345689
Q ss_pred eEEEeccchhhhcCC----------------------CCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 117 DAVIDKGTLDSLMCG----------------------TNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 117 D~v~~~~~l~~~~~~----------------------~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
|+|+++.++...... .........++..+.++|++||++.++.+.
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 999999987321000 000011345788899999999999988754
No 282
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.65 E-value=3.8e-08 Score=71.89 Aligned_cols=99 Identities=18% Similarity=0.222 Sum_probs=70.7
Q ss_pred hhhHHHHHhhCCCCCcEEEEcccCc-HhHHHHHH-cCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCC-
Q 025475 37 SALRPFVRKYIPTSSRVLMVGCGNA-LMSEDMVK-DGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFED- 113 (252)
Q Consensus 37 ~~l~~~~~~~~~~~~~vLD~G~G~G-~~~~~l~~-~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~- 113 (252)
..+.+.+.+...++.+|||+|||.| ..+..|++ .|. +|+++|+++.+++ +++.|+++.. ...
T Consensus 23 e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~-------------~v~dDiF~P~-~~~Y 87 (153)
T 2k4m_A 23 NDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG-------------IVRDDITSPR-MEIY 87 (153)
T ss_dssp HHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT-------------EECCCSSSCC-HHHH
T ss_pred HHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc-------------eEEccCCCCc-cccc
Confidence 3567777777777789999999999 69999997 665 8999999986543 8899998854 221
Q ss_pred CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 114 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
..||+|.+.. ++..++..+.++.+. -|.-+++.....
T Consensus 88 ~~~DLIYsir----------PP~El~~~i~~lA~~--v~adliI~pL~~ 124 (153)
T 2k4m_A 88 RGAALIYSIR----------PPAEIHSSLMRVADA--VGARLIIKPLTG 124 (153)
T ss_dssp TTEEEEEEES----------CCTTTHHHHHHHHHH--HTCEEEEECBTT
T ss_pred CCcCEEEEcC----------CCHHHHHHHHHHHHH--cCCCEEEEcCCC
Confidence 4799997643 334445555555543 355777766543
No 283
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.64 E-value=8.4e-08 Score=81.43 Aligned_cols=112 Identities=21% Similarity=0.169 Sum_probs=81.8
Q ss_pred CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC----------CCCCeEEEccccCCCC---CCCC
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE----------IPQLKYLQMDVRDMSF---FEDE 114 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~----------~~~v~~~~~d~~~~~~---~~~~ 114 (252)
+++.+||-+|.|.|..++.+++....+++.||+++.+++.+++.+.. .++++++.+|..++.. ...+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 35579999999999999999988766899999999999999998632 1358899999876531 1345
Q ss_pred CeeEEEeccchhhhcCC---CCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 115 SFDAVIDKGTLDSLMCG---TNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+||+|+....-.....+ .....-...+++.++++|+|||+++...
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 79999986431110000 0011234678899999999999998754
No 284
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.58 E-value=3.7e-08 Score=79.81 Aligned_cols=123 Identities=13% Similarity=0.064 Sum_probs=75.1
Q ss_pred hHHHHHhh-CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCe
Q 025475 39 LRPFVRKY-IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESF 116 (252)
Q Consensus 39 l~~~~~~~-~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 116 (252)
|.++..+. +.++.+|||+|||+|.++..+++. +...++++|++..+...+........++.....++.... +...++
T Consensus 79 L~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~-l~~~~~ 157 (282)
T 3gcz_A 79 LRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFN-MEVIPG 157 (282)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGG-SCCCCC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhh-cCCCCc
Confidence 44444444 567779999999999999998865 556799999986531111100000112333332222122 456789
Q ss_pred eEEEeccchhhhcCCCCChhhH--HHHHHHHHHcccCC--cEEEEEEcC--Chhh
Q 025475 117 DAVIDKGTLDSLMCGTNAPISA--SQMLGEVSRLLKPG--GIYMLITYG--DPKA 165 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~--~~~l~~~~~~L~~g--G~l~i~~~~--~~~~ 165 (252)
|+|++....+ . +...-+.. -.+++-+.++|+|| |.+++-.+. .+..
T Consensus 158 DvVLSDmApn-s--G~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~ 209 (282)
T 3gcz_A 158 DTLLCDIGES-S--PSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLI 209 (282)
T ss_dssp SEEEECCCCC-C--SCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHH
T ss_pred CEEEecCccC-C--CChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccH
Confidence 9999987654 1 11111222 23577778999999 999999888 5543
No 285
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.56 E-value=8.2e-07 Score=75.88 Aligned_cols=115 Identities=16% Similarity=0.048 Sum_probs=75.7
Q ss_pred CCcEEEEcccCcHhHHHHHHc------------------CCCcEEEEeCC-----------HHHHHHHHHhhcCCCCCeE
Q 025475 50 SSRVLMVGCGNALMSEDMVKD------------------GYEDIVNIDIS-----------SVAIDMMKMKYEEIPQLKY 100 (252)
Q Consensus 50 ~~~vLD~G~G~G~~~~~l~~~------------------~~~~v~~vD~s-----------~~~i~~a~~~~~~~~~v~~ 100 (252)
..+|+|+||++|.++..+... ...+|+..|+. +.+.+.+++......+.-+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999998887664 12367788887 4444443332211112355
Q ss_pred EEccccC---CCCCCCCCeeEEEeccchhhhcCCCCC---------------------h-----------hhHHHHHHHH
Q 025475 101 LQMDVRD---MSFFEDESFDAVIDKGTLDSLMCGTNA---------------------P-----------ISASQMLGEV 145 (252)
Q Consensus 101 ~~~d~~~---~~~~~~~~~D~v~~~~~l~~~~~~~~~---------------------~-----------~~~~~~l~~~ 145 (252)
+.+.... -. ++++++|+|+++.++|++.--+.. + .|...+|+..
T Consensus 133 ~~gvpgSFy~rl-fp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRL-FPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCC-SCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhcc-CCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554433 23 789999999999999997211100 0 1233447777
Q ss_pred HHcccCCcEEEEEEcCChhh
Q 025475 146 SRLLKPGGIYMLITYGDPKA 165 (252)
Q Consensus 146 ~~~L~~gG~l~i~~~~~~~~ 165 (252)
++.|+|||.+++...+.+..
T Consensus 212 a~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 212 SEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHEEEEEEEEEEEECCCTT
T ss_pred HHHhccCCeEEEEEecCCCc
Confidence 99999999999998776553
No 286
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.54 E-value=2.8e-07 Score=78.61 Aligned_cols=114 Identities=12% Similarity=0.111 Sum_probs=74.5
Q ss_pred CCcEEEEcccCcHhHHHHHHc----------------CCCcEEEEeCCHHHHHHHHHhhcCCC--------------CCe
Q 025475 50 SSRVLMVGCGNALMSEDMVKD----------------GYEDIVNIDISSVAIDMMKMKYEEIP--------------QLK 99 (252)
Q Consensus 50 ~~~vLD~G~G~G~~~~~l~~~----------------~~~~v~~vD~s~~~i~~a~~~~~~~~--------------~v~ 99 (252)
..+|+|+|||+|.++..+... ...+|..-|+........-+.+.... +-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 458999999999988887321 13467888887655444433332110 112
Q ss_pred EEEccc---cCCCCCCCCCeeEEEeccchhhhcCCCCC-------------------------------hhhHHHHHHHH
Q 025475 100 YLQMDV---RDMSFFEDESFDAVIDKGTLDSLMCGTNA-------------------------------PISASQMLGEV 145 (252)
Q Consensus 100 ~~~~d~---~~~~~~~~~~~D~v~~~~~l~~~~~~~~~-------------------------------~~~~~~~l~~~ 145 (252)
++.+.. ..-. ++++++|+|+++.++|++.--+.. ..|...+|+..
T Consensus 133 f~~gvpgSFy~rl-fP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRL-FPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCC-SCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhccc-CCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 333322 2223 788999999999999998211000 12667789999
Q ss_pred HHcccCCcEEEEEEcCChh
Q 025475 146 SRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 146 ~~~L~~gG~l~i~~~~~~~ 164 (252)
++.|+|||.+++...+.+.
T Consensus 212 a~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHEEEEEEEEEEEEECCC
T ss_pred HHHhCCCCEEEEEEecCCC
Confidence 9999999999998876543
No 287
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.48 E-value=4.8e-07 Score=76.48 Aligned_cols=73 Identities=10% Similarity=0.070 Sum_probs=58.3
Q ss_pred hCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccch
Q 025475 46 YIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 125 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l 125 (252)
.+.++.+|||+||++|.++..++++|. +|++||+.+- -. .+...++|+++++|..... ....++|+|+|..+.
T Consensus 208 ~l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l-~~----~l~~~~~V~~~~~d~~~~~-~~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 208 RLANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPM-AQ----SLMDTGQVTWLREDGFKFR-PTRSNISWMVCDMVE 280 (375)
T ss_dssp HSCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCC-CH----HHHTTTCEEEECSCTTTCC-CCSSCEEEEEECCSS
T ss_pred cCCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhc-Ch----hhccCCCeEEEeCcccccc-CCCCCcCEEEEcCCC
Confidence 367899999999999999999999975 9999998641 11 1223468999999998886 556789999997653
No 288
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.33 E-value=1.9e-06 Score=70.08 Aligned_cols=75 Identities=15% Similarity=0.172 Sum_probs=62.5
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC----CCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----FEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~----~~~~~~D~v~~~ 122 (252)
+.++..++|.+||.|..+..+++. ..+++|+|.++.+++.+++ +.. ++++++++|+.++.. ...+++|.|+++
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~-~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL-PGLTVVQGNFRHLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC-TTEEEEESCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc-CCEEEEECCcchHHHHHHHcCCCCcCEEEeC
Confidence 356779999999999999999998 4599999999999999999 765 689999999988742 223579999975
Q ss_pred cc
Q 025475 123 GT 124 (252)
Q Consensus 123 ~~ 124 (252)
..
T Consensus 97 LG 98 (285)
T 1wg8_A 97 LG 98 (285)
T ss_dssp CS
T ss_pred Cc
Confidence 43
No 289
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.32 E-value=7.1e-07 Score=72.78 Aligned_cols=115 Identities=11% Similarity=0.096 Sum_probs=70.8
Q ss_pred hCCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 46 YIPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
.+.++.+|||+||++|.++..+++. +...++++|+...+...... ... ..++.....++.... +..+++|+|++..
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~di~~-l~~~~~DlVlsD~ 155 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKSNVFT-MPTEPSDTLLCDI 155 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCTTT-SCCCCCSEEEECC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCCceEEeecCceeee-cCCCCcCEEeecC
Confidence 3567889999999999999999986 55578999997532100000 000 012222222222122 4557899999986
Q ss_pred chhhhcCCCCChhh--HHHHHHHHHHcccCC-cEEEEEEcC--Chhh
Q 025475 124 TLDSLMCGTNAPIS--ASQMLGEVSRLLKPG-GIYMLITYG--DPKA 165 (252)
Q Consensus 124 ~l~~~~~~~~~~~~--~~~~l~~~~~~L~~g-G~l~i~~~~--~~~~ 165 (252)
.-+ . +...-+. ...+++-+.++|+|| |.+++-.+. .+..
T Consensus 156 APn-s--G~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~ 199 (300)
T 3eld_A 156 GES-S--SNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDV 199 (300)
T ss_dssp CCC-C--SSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHH
T ss_pred cCC-C--CCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccH
Confidence 544 2 1100011 134577778999999 999999887 5543
No 290
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.29 E-value=8.2e-06 Score=72.99 Aligned_cols=130 Identities=12% Similarity=0.139 Sum_probs=85.8
Q ss_pred eeeccchhhHHHHHhhCC--CCCcEEEEcccCcHhHHHHHHc----C----------CCcEEEEeCCHHHHHHHHHhh--
Q 025475 31 DWYQRYSALRPFVRKYIP--TSSRVLMVGCGNALMSEDMVKD----G----------YEDIVNIDISSVAIDMMKMKY-- 92 (252)
Q Consensus 31 ~~~~~~~~l~~~~~~~~~--~~~~vLD~G~G~G~~~~~l~~~----~----------~~~v~~vD~s~~~i~~a~~~~-- 92 (252)
.-+...+.+.+++...+. ++.+|+|.+||+|.+...+.+. . ...++|+|+++.+...|+.++
T Consensus 197 GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~l 276 (530)
T 3ufb_A 197 GEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLL 276 (530)
T ss_dssp CCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHH
T ss_pred ceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHh
Confidence 334455667777766653 4559999999999998877653 1 236999999999999998765
Q ss_pred cCCCCCeEEEccccCCCC---CCCCCeeEEEeccchhhhc---------CCCCChhhHHHHHHHHHHccc-------CCc
Q 025475 93 EEIPQLKYLQMDVRDMSF---FEDESFDAVIDKGTLDSLM---------CGTNAPISASQMLGEVSRLLK-------PGG 153 (252)
Q Consensus 93 ~~~~~v~~~~~d~~~~~~---~~~~~~D~v~~~~~l~~~~---------~~~~~~~~~~~~l~~~~~~L~-------~gG 153 (252)
.+.....+..+|....+. ....+||+|++++++.--. ...+....-..++..+.+.|+ +||
T Consensus 277 hg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gG 356 (530)
T 3ufb_A 277 HGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGG 356 (530)
T ss_dssp HTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCC
T ss_pred cCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCc
Confidence 233345677788765431 2235799999999864210 000111122346777777776 699
Q ss_pred EEEEEEc
Q 025475 154 IYMLITY 160 (252)
Q Consensus 154 ~l~i~~~ 160 (252)
++.++.+
T Consensus 357 r~avVlP 363 (530)
T 3ufb_A 357 RAAVVVP 363 (530)
T ss_dssp EEEEEEE
T ss_pred eEEEEec
Confidence 9888764
No 291
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.27 E-value=8.6e-07 Score=75.14 Aligned_cols=115 Identities=14% Similarity=0.097 Sum_probs=80.4
Q ss_pred CCCcEEEEcccCcHhHHHHHHc------------C-----CCcEEEEeCCHHHHHHHHHhhcCCC---CCeEEEccccC-
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD------------G-----YEDIVNIDISSVAIDMMKMKYEEIP---QLKYLQMDVRD- 107 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~------------~-----~~~v~~vD~s~~~i~~a~~~~~~~~---~v~~~~~d~~~- 107 (252)
...+|+|+||++|..+..+... + ..+|+..|+.....+.+-+.+.... +..++.+....
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3458999999999877665443 1 2478899998887777766664311 22444444333
Q ss_pred --CCCCCCCCeeEEEeccchhhhcCCCCC--------------------------hhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 108 --MSFFEDESFDAVIDKGTLDSLMCGTNA--------------------------PISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 108 --~~~~~~~~~D~v~~~~~l~~~~~~~~~--------------------------~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
-. ++++++|+|+++.++|++.--+.. ..|...+|+..++.|+|||.+++..
T Consensus 131 y~rl-fp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRL-FPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCC-SCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhcc-CCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 33 789999999999999997221100 1356777999999999999999988
Q ss_pred cCChh
Q 025475 160 YGDPK 164 (252)
Q Consensus 160 ~~~~~ 164 (252)
.+.+.
T Consensus 210 ~gr~~ 214 (359)
T 1m6e_X 210 LGRRS 214 (359)
T ss_dssp EECSS
T ss_pred ecCCC
Confidence 76554
No 292
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.23 E-value=5.9e-06 Score=67.75 Aligned_cols=103 Identities=13% Similarity=0.093 Sum_probs=75.9
Q ss_pred CCCcEEEEcccCcHhHHHHHHc----C--CCcEEEEeCCHH--------------------------HHHHHHHhhcCC-
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD----G--YEDIVNIDISSV--------------------------AIDMMKMKYEEI- 95 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~----~--~~~v~~vD~s~~--------------------------~i~~a~~~~~~~- 95 (252)
.+.+|||+|+..|..+..++.. + ..+++++|..+. .++.++++++..
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 4559999999999988887643 1 458999996421 356677776532
Q ss_pred ---CCCeEEEccccCC-CCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 96 ---PQLKYLQMDVRDM-SFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 96 ---~~v~~~~~d~~~~-~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
++++++.+++.+. +..+.++||+|++..-. - +.....++.++..|+|||++++=++
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y-------~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--Y-------ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--H-------HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--c-------ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 5799999999764 33445789999987542 1 3456789999999999999887554
No 293
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.22 E-value=7.5e-07 Score=72.32 Aligned_cols=104 Identities=16% Similarity=0.202 Sum_probs=68.8
Q ss_pred CCCcEEEEcccCcHhHHHHHHc-------C------CCcEEEEeCCH---HHHH-----------HHHHhhcC-------
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD-------G------YEDIVNIDISS---VAID-----------MMKMKYEE------- 94 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~-------~------~~~v~~vD~s~---~~i~-----------~a~~~~~~------- 94 (252)
+..+|||+|+|+|..+..+++. + ..+++++|..| +.+. .++..++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3459999999999988776542 2 14899999876 4444 34444321
Q ss_pred -------C--CCCeEEEccccCC-CCCCC---CCeeEEEeccchhhhcCCCCChh-hHHHHHHHHHHcccCCcEEEE
Q 025475 95 -------I--PQLKYLQMDVRDM-SFFED---ESFDAVIDKGTLDSLMCGTNAPI-SASQMLGEVSRLLKPGGIYML 157 (252)
Q Consensus 95 -------~--~~v~~~~~d~~~~-~~~~~---~~~D~v~~~~~l~~~~~~~~~~~-~~~~~l~~~~~~L~~gG~l~i 157 (252)
. .+++++.+|+.+. +.... ..||+|+....-- ..+++ -...+++.+.++|+|||+++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp-----~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAP-----AKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCT-----TTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCc-----ccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 1 2577889998773 32222 2799999863111 11222 246789999999999999874
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.94 E-value=4.1e-05 Score=62.27 Aligned_cols=115 Identities=14% Similarity=0.147 Sum_probs=73.9
Q ss_pred hHHHHHhh-CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEc-cccCCCCCCC
Q 025475 39 LRPFVRKY-IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQM-DVRDMSFFED 113 (252)
Q Consensus 39 l~~~~~~~-~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~-d~~~~~~~~~ 113 (252)
|..+..+. +.++.+|||+||++|.++..++.+ |..+|+|+|+...-.+.= ...... +.+.+.+. |+..++ +
T Consensus 83 L~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w~lV~~~~~~Dv~~l~--~- 158 (321)
T 3lkz_A 83 LRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGWNIVTMKSGVDVFYRP--S- 158 (321)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTGGGEEEECSCCTTSSC--C-
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCCcceEEEeccCHhhCC--C-
Confidence 34444443 567779999999999999977776 566899999975411000 000011 13667776 777765 2
Q ss_pred CCeeEEEeccchhhhcCCCCChh-hH---HHHHHHHHHcccCC-cEEEEEEcCC
Q 025475 114 ESFDAVIDKGTLDSLMCGTNAPI-SA---SQMLGEVSRLLKPG-GIYMLITYGD 162 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~~~~~~~~~-~~---~~~l~~~~~~L~~g-G~l~i~~~~~ 162 (252)
.++|+|+|.-. + +.+++. +. -.+|+-+-+.|++| |.+++-.+.+
T Consensus 159 ~~~D~ivcDig-e----Ss~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 159 ECCDTLLCDIG-E----SSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CCCSEEEECCC-C----CCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCCEEEEECc-c----CCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 56999999754 2 122322 22 23566667889888 8988877766
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.89 E-value=1.6e-05 Score=63.46 Aligned_cols=108 Identities=13% Similarity=0.068 Sum_probs=65.6
Q ss_pred hCCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC-CCC---eEEEc-cccCCCCCCCCCeeEE
Q 025475 46 YIPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI-PQL---KYLQM-DVRDMSFFEDESFDAV 119 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~-~~v---~~~~~-d~~~~~~~~~~~~D~v 119 (252)
.++++.+|+|+||+.|.++..+++. +...+.|.++.... . .. -.... ..+ .+.++ |++++. ..++|+|
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~-P~~~~~~Gv~~i~~~~G~Df~~~~---~~~~DvV 143 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EE-PMLMQSYGWNIVTMKSGVDVFYKP---SEISDTL 143 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CC-CCCCCSTTGGGEEEECSCCGGGSC---CCCCSEE
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cC-CCcccCCCceEEEeeccCCccCCC---CCCCCEE
Confidence 3678889999999999999999886 22233444443321 0 00 00000 233 44446 888753 4579999
Q ss_pred EeccchhhhcCCCCChhhHH--HHHHHHHHcccCCc-EEEEEEcCC
Q 025475 120 IDKGTLDSLMCGTNAPISAS--QMLGEVSRLLKPGG-IYMLITYGD 162 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~--~~l~~~~~~L~~gG-~l~i~~~~~ 162 (252)
+|...-. ++.+.-+..+ .++.-+.++|+||| .+++-.+..
T Consensus 144 LSDMAPn---SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 144 LCDIGES---SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp EECCCCC---CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred EeCCCCC---CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 9975321 1111111111 25677779999999 999988884
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.86 E-value=0.00015 Score=57.06 Aligned_cols=116 Identities=16% Similarity=0.158 Sum_probs=75.6
Q ss_pred hHHHHHhh-CCCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEc-cccCCCCCCC
Q 025475 39 LRPFVRKY-IPTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQM-DVRDMSFFED 113 (252)
Q Consensus 39 l~~~~~~~-~~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~-d~~~~~~~~~ 113 (252)
|.++..+. +.++.+|+|+||++|.++..++.+ +..+|+++|+...-.+.= ..... -+.+++.++ |++.++ .
T Consensus 67 L~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gwn~v~fk~gvDv~~~~---~ 142 (267)
T 3p8z_A 67 LQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGWNIVKLMSGKDVFYLP---P 142 (267)
T ss_dssp HHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTTTSEEEECSCCGGGCC---C
T ss_pred HHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCcCceEEEeccceeecC---C
Confidence 34444443 567789999999999999988776 566899999975421000 00001 135889988 987765 2
Q ss_pred CCeeEEEeccchhhhcCCCCChh-hH---HHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 114 ESFDAVIDKGTLDSLMCGTNAPI-SA---SQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~~~~~~~~~-~~---~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
.++|.|+|.-. -+.+++. +. -.+|+-+-+.|++ |.+++-.+.+..
T Consensus 143 ~~~DtllcDIg-----eSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 143 EKCDTLLCDIG-----ESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp CCCSEEEECCC-----CCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred ccccEEEEecC-----CCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 56999999743 1223322 32 2356666789988 788887766554
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.83 E-value=3.5e-05 Score=63.82 Aligned_cols=54 Identities=13% Similarity=0.146 Sum_probs=45.5
Q ss_pred HHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC
Q 025475 40 RPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE 94 (252)
Q Consensus 40 ~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~ 94 (252)
..++.....++..|||++||+|..+..++..|. +++|+|+++.+++.+++++..
T Consensus 226 ~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 226 ERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp HHHHHHHCCTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHH
Confidence 334444456788999999999999999999875 899999999999999998753
No 298
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.76 E-value=2.3e-05 Score=63.86 Aligned_cols=122 Identities=7% Similarity=-0.033 Sum_probs=88.9
Q ss_pred hhHHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC---CCCC
Q 025475 38 ALRPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF---FEDE 114 (252)
Q Consensus 38 ~l~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~---~~~~ 114 (252)
.+...+... . +..+||+=+|+|.++..+++.+ .+++.+|.++..++..+++++...+++++..|...... .+..
T Consensus 82 ~yf~~l~~~-n-~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~ 158 (283)
T 2oo3_A 82 EYISVIKQI-N-LNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPE 158 (283)
T ss_dssp HHHHHHHHH-S-SSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTT
T ss_pred HHHHHHHHh-c-CCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCC
Confidence 344445443 3 4578999999999999999965 69999999999999999999766679999999755210 2335
Q ss_pred CeeEEEeccchhhhcCCCCChhhHHHHHHHHHH--cccCCcEEEEEEcCChhhhhhh
Q 025475 115 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSR--LLKPGGIYMLITYGDPKARMIH 169 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~--~L~~gG~l~i~~~~~~~~~~~~ 169 (252)
+||+|++..+++.- .+..++++.+.+ .+.++|.+++..+.........
T Consensus 159 ~fdLVfiDPPYe~k-------~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~ 208 (283)
T 2oo3_A 159 KRGLIFIDPSYERK-------EEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQ 208 (283)
T ss_dssp SCEEEEECCCCCST-------THHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHH
T ss_pred CccEEEECCCCCCC-------cHHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHH
Confidence 79999999887743 455666655554 4578999999876544433333
No 299
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.49 E-value=2.3e-05 Score=81.52 Aligned_cols=104 Identities=19% Similarity=0.197 Sum_probs=53.6
Q ss_pred CCCcEEEEcccCcHhHHHHHHc-C-----CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEec
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD-G-----YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~-~-----~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 122 (252)
+..+|||+|+|+|..+..+.+. + ..+++..|+|+...+.++++++.. ++.....|..+...+...+||+|++.
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~-di~~~~~d~~~~~~~~~~~ydlvia~ 1318 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL-HVTQGQWDPANPAPGSLGKADLLVCN 1318 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH-TEEEECCCSSCCCC-----CCEEEEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc-ccccccccccccccCCCCceeEEEEc
Confidence 5569999999999876655443 1 347999999988877777666431 12221123323211345679999999
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+++|.. .+....+++++++|+|||++++.+.
T Consensus 1319 ~vl~~t-------~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1319 CALATL-------GDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp CC---------------------------CCEEEEEEC
T ss_pred cccccc-------ccHHHHHHHHHHhcCCCcEEEEEec
Confidence 999877 7888999999999999999988764
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.49 E-value=0.00022 Score=60.21 Aligned_cols=58 Identities=19% Similarity=0.145 Sum_probs=50.5
Q ss_pred CCcEEEEcccCcHhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCC
Q 025475 50 SSRVLMVGCGNALMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM 108 (252)
Q Consensus 50 ~~~vLD~G~G~G~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~ 108 (252)
+..|||+|+|.|.++..+++.. ..+++++|+++.++...++.. ..++++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EGSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TTSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cCCCEEEEECCccch
Confidence 4689999999999999999862 458999999999999999877 456899999999664
No 301
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.44 E-value=0.0013 Score=55.23 Aligned_cols=109 Identities=16% Similarity=0.216 Sum_probs=81.9
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC-----------------------CCCeEEEc
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI-----------------------PQLKYLQM 103 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~-----------------------~~v~~~~~ 103 (252)
.+...|+.+|||.......+... +...++-||. |+.++.-++.+... ++.+++.+
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 35569999999999988888875 3346666776 77777776665332 46889999
Q ss_pred cccCCC-------CC-CCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 104 DVRDMS-------FF-EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 104 d~~~~~-------~~-~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
|+.+.. .. ......++++-.++.++ +++...++++.+.+.. ++|.+++.+...+
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL-----~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYM-----HNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGS-----CHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCC-----CHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 998742 11 22457889999999999 8899999999998877 7888877776554
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.43 E-value=0.00033 Score=56.72 Aligned_cols=54 Identities=13% Similarity=0.136 Sum_probs=46.2
Q ss_pred HHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC
Q 025475 40 RPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE 94 (252)
Q Consensus 40 ~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~ 94 (252)
..++.....++..|||..||+|..+..+.+.|. +++|+|+++.+++.+++++..
T Consensus 203 ~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 203 ERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp HHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHh
Confidence 344555567888999999999999999999875 999999999999999998753
No 303
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.40 E-value=0.00018 Score=60.00 Aligned_cols=77 Identities=13% Similarity=0.122 Sum_probs=60.9
Q ss_pred CCCCcEEEEcccCcHhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC----CC-CCCeeEEE
Q 025475 48 PTSSRVLMVGCGNALMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----FE-DESFDAVI 120 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~~~-~-~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~----~~-~~~~D~v~ 120 (252)
.++..++|..||.|..+..+++. + .++++|+|.++.+++.++ ++. ..+++++++++.++.. .. .+++|.|+
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~-~~Rv~lv~~nF~~l~~~L~~~g~~~~vDgIL 133 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID-DPRFSIIHGPFSALGEYVAERDLIGKIDGIL 133 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC-CTTEEEEESCGGGHHHHHHHTTCTTCEEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc-CCcEEEEeCCHHHHHHHHHhcCCCCcccEEE
Confidence 57789999999999999999987 3 568999999999999995 442 3579999999988642 11 13699999
Q ss_pred eccchh
Q 025475 121 DKGTLD 126 (252)
Q Consensus 121 ~~~~l~ 126 (252)
++..+.
T Consensus 134 fDLGVS 139 (347)
T 3tka_A 134 LDLGVS 139 (347)
T ss_dssp EECSCC
T ss_pred ECCccC
Confidence 876433
No 304
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.36 E-value=0.0016 Score=55.59 Aligned_cols=75 Identities=19% Similarity=0.289 Sum_probs=62.0
Q ss_pred CcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC--C-----CCCCeeEEEecc
Q 025475 51 SRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF--F-----EDESFDAVIDKG 123 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~--~-----~~~~~D~v~~~~ 123 (252)
.+++|+.||.|.++..+.+.|...+.++|+++.+++..+.++ ++..++++|+.+... + ....+|+|+...
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~---~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggp 79 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF---PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGP 79 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC---TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC---CCCceEecChhhcCHHHHHhhcccCCCeeEEEecC
Confidence 589999999999999999999767889999999999998886 356788999988741 1 245799999988
Q ss_pred chhhh
Q 025475 124 TLDSL 128 (252)
Q Consensus 124 ~l~~~ 128 (252)
.+..+
T Consensus 80 PCQ~f 84 (376)
T 3g7u_A 80 PCQGF 84 (376)
T ss_dssp CCCTT
T ss_pred CCCCc
Confidence 76654
No 305
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.28 E-value=0.001 Score=54.21 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=70.9
Q ss_pred hHHHHHh---hCCCCCcEEEEcc------cCcHhHHHHHHcC-C-CcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccC
Q 025475 39 LRPFVRK---YIPTSSRVLMVGC------GNALMSEDMVKDG-Y-EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD 107 (252)
Q Consensus 39 l~~~~~~---~~~~~~~vLD~G~------G~G~~~~~l~~~~-~-~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~ 107 (252)
+-+.+.. .+|.+.+|||+|+ -+|... +.+.+ . +.++++|+.+-. .... .++++|...
T Consensus 96 lcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~---------sda~-~~IqGD~~~ 163 (344)
T 3r24_A 96 LCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFV---------SDAD-STLIGDCAT 163 (344)
T ss_dssp HHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCB---------CSSS-EEEESCGGG
T ss_pred HHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCcccc---------cCCC-eEEEccccc
Confidence 4555644 2578889999996 567632 22222 2 389999997631 1112 458999876
Q ss_pred CCCCCCCCeeEEEeccchhhhcC-CC---CChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 108 MSFFEDESFDAVIDKGTLDSLMC-GT---NAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 108 ~~~~~~~~~D~v~~~~~l~~~~~-~~---~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
.. ..++||+|++...-.-... .. +...-...++.-+.+.|+|||.+++-.+..+.
T Consensus 164 ~~--~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 164 VH--TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp EE--ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred cc--cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 53 4578999999754221110 00 11223466677788999999999998877655
No 306
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.27 E-value=0.00081 Score=56.34 Aligned_cols=74 Identities=14% Similarity=0.110 Sum_probs=59.9
Q ss_pred CCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhhh
Q 025475 50 SSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 128 (252)
Q Consensus 50 ~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~ 128 (252)
+.+++|+.||.|.++..+...|...+.++|+++.+++..+.++.... ++|+.++....-..+|+|+....+..+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~-----~~Di~~~~~~~~~~~D~l~~gpPCQ~f 84 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP-----EGDITQVNEKTIPDHDILCAGFPCQAF 84 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC-----BSCGGGSCGGGSCCCSEEEEECCCTTT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC-----cCCHHHcCHhhCCCCCEEEECCCCCCc
Confidence 45899999999999999999998789999999999999999985422 688877642112359999998887755
No 307
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.14 E-value=0.00048 Score=58.13 Aligned_cols=75 Identities=20% Similarity=0.343 Sum_probs=58.5
Q ss_pred CcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC--CCCCCeeEEEeccchh
Q 025475 51 SRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF--FEDESFDAVIDKGTLD 126 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~--~~~~~~D~v~~~~~l~ 126 (252)
.+++|+.||.|.++..+...| ...+.++|+++.+++..+.++. +..++++|+.++.. ++...+|+|+....+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~---~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq 79 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP---HTQLLAKTIEGITLEEFDRLSFDMILMSPPCQ 79 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---TSCEECSCGGGCCHHHHHHHCCSEEEECCC--
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc---ccccccCCHHHccHhHcCcCCcCEEEEcCCCc
Confidence 479999999999999999988 4579999999999999999974 45678899988741 1112589999998876
Q ss_pred hh
Q 025475 127 SL 128 (252)
Q Consensus 127 ~~ 128 (252)
.+
T Consensus 80 ~f 81 (343)
T 1g55_A 80 PF 81 (343)
T ss_dssp --
T ss_pred ch
Confidence 54
No 308
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.84 E-value=0.011 Score=49.06 Aligned_cols=104 Identities=14% Similarity=0.194 Sum_probs=77.1
Q ss_pred CcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-----CCCCeEEEccccCCCC--------CCCCCee
Q 025475 51 SRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-----IPQLKYLQMDVRDMSF--------FEDESFD 117 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-----~~~v~~~~~d~~~~~~--------~~~~~~D 117 (252)
..|+++|||-=.....+.......++-|| -|..++..++.+.. .++..++.+|+.+ .- +.....=
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCE
Confidence 47999999976655544422134788899 49999988888852 3467899999987 20 1223456
Q ss_pred EEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 118 AVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 118 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
++++-.+++|+ +++....+++.+.+.+.+|+.+++-...
T Consensus 182 ~~i~Egvl~Yl-----~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 182 AWLAEGLLMYL-----PATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp EEEECSCGGGS-----CHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred EEEEechHhhC-----CHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 78888899999 8888999999999998899888776544
No 309
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.77 E-value=0.0033 Score=52.53 Aligned_cols=74 Identities=15% Similarity=0.126 Sum_probs=60.7
Q ss_pred CcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhhh
Q 025475 51 SRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 128 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~ 128 (252)
++|+|+-||.|.+..-+.+.|+..+.++|+++.+++.-+.++. ..++.+|+.++....-...|+++...++..+
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~----~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~f 74 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS----AKLIKGDISKISSDEFPKCDGIIGGPPSQSW 74 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC----SEEEESCGGGCCGGGSCCCSEEECCCCGGGT
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC----CCcccCChhhCCHhhCCcccEEEecCCCCCc
Confidence 4799999999999999999998778899999999999888874 3678899988752222468999998877754
No 310
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.76 E-value=0.0033 Score=52.59 Aligned_cols=109 Identities=10% Similarity=0.092 Sum_probs=72.9
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCC--CcE-EEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC--CCCCCeeEEEecc
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGY--EDI-VNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF--FEDESFDAVIDKG 123 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~--~~v-~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~--~~~~~~D~v~~~~ 123 (252)
...+++|+.||.|.+...+...|. ..+ .++|+++.+.+..+.++... ++++|+.++.. ++...+|+++...
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----~~~~DI~~~~~~~i~~~~~Dil~ggp 84 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----VQVKNLDSISIKQIESLNCNTWFMSP 84 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----CBCCCTTTCCHHHHHHTCCCEEEECC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----cccCChhhcCHHHhccCCCCEEEecC
Confidence 345899999999999999999883 456 69999999999999988532 56788887641 2223689999987
Q ss_pred chhhh--c-CCC--CChhhHHHHHHHHHH-cccC---CcEEEEEEcC
Q 025475 124 TLDSL--M-CGT--NAPISASQMLGEVSR-LLKP---GGIYMLITYG 161 (252)
Q Consensus 124 ~l~~~--~-~~~--~~~~~~~~~l~~~~~-~L~~---gG~l~i~~~~ 161 (252)
....+ . .+. ...+.+..++.++.+ +++. .-.+++.+.-
T Consensus 85 PCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV 131 (327)
T 3qv2_A 85 PCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENV 131 (327)
T ss_dssp CCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEEC
T ss_pred CccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEch
Confidence 76643 1 111 111223355666666 5532 1356666654
No 311
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.42 E-value=0.0041 Score=52.12 Aligned_cols=75 Identities=16% Similarity=0.274 Sum_probs=59.7
Q ss_pred CcEEEEcccCcHhHHHHHHcCC--CcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC--CCCCCeeEEEeccchh
Q 025475 51 SRVLMVGCGNALMSEDMVKDGY--EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF--FEDESFDAVIDKGTLD 126 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~~~--~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~--~~~~~~D~v~~~~~l~ 126 (252)
.+++|+.||.|.+...+.+.|. ..+.++|+++.+.+..+.++. ...++..|+.++.. ++...+|+++...+..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~---~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ 80 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP---ETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQ 80 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---TSCEECCCGGGCCHHHHHHTTCCEEEECCCCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC---CCceeccccccCCHHHhccCCCCEEEecCCCc
Confidence 4799999999999999998874 568899999999999998874 44677889887741 2223699999887766
Q ss_pred hh
Q 025475 127 SL 128 (252)
Q Consensus 127 ~~ 128 (252)
.+
T Consensus 81 ~f 82 (333)
T 4h0n_A 81 PF 82 (333)
T ss_dssp CS
T ss_pred ch
Confidence 54
No 312
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.37 E-value=0.011 Score=48.65 Aligned_cols=77 Identities=19% Similarity=0.136 Sum_probs=60.8
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCc--EEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC--CC-CCCeeEEEecc
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYED--IVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF--FE-DESFDAVIDKG 123 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~--v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~--~~-~~~~D~v~~~~ 123 (252)
...+++|+-||.|.+...+.+.|... +.++|+++.+++..+.++. ...++.+|+.++.. ++ .+.+|+++...
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~---~~~~~~~DI~~i~~~~i~~~~~~Dll~ggp 91 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ---GKIMYVGDVRSVTQKHIQEWGPFDLVIGGS 91 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT---TCEEEECCGGGCCHHHHHHTCCCSEEEECC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC---CCceeCCChHHccHHHhcccCCcCEEEecC
Confidence 44599999999999999999998544 6999999999988888763 44678899988741 11 14699999988
Q ss_pred chhhh
Q 025475 124 TLDSL 128 (252)
Q Consensus 124 ~l~~~ 128 (252)
.+..+
T Consensus 92 PCQ~f 96 (295)
T 2qrv_A 92 PCNDL 96 (295)
T ss_dssp CCGGG
T ss_pred CCccc
Confidence 77765
No 313
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.34 E-value=0.0091 Score=49.79 Aligned_cols=54 Identities=7% Similarity=0.139 Sum_probs=46.5
Q ss_pred HHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC
Q 025475 40 RPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE 94 (252)
Q Consensus 40 ~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~ 94 (252)
..++.....++..|||.-||+|..+......|. +++|+|+++..++.+++++..
T Consensus 243 ~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 243 EFFIRMLTEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp HHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSC
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHh
Confidence 444555567888999999999999999998875 999999999999999999864
No 314
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.31 E-value=0.018 Score=48.80 Aligned_cols=97 Identities=15% Similarity=0.177 Sum_probs=64.6
Q ss_pred CCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCC----CCCCCCCeeEEE
Q 025475 47 IPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM----SFFEDESFDAVI 120 (252)
Q Consensus 47 ~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~----~~~~~~~~D~v~ 120 (252)
+.++.+||.+|+|. |..+..+++. |..+|+++|.+++.++.+++.-. -.++..+-.++ .....+.+|+|+
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa----~~vi~~~~~~~~~~~~~~~~gg~D~vi 263 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA----THVINSKTQDPVAAIKEITDGGVNFAL 263 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC----SEEEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC----CEEecCCccCHHHHHHHhcCCCCcEEE
Confidence 56788999999875 7788787775 65579999999998888876522 12222111111 001223699998
Q ss_pred eccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 121 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
..-. ....++.+.++|+++|.+++...
T Consensus 264 d~~g-------------~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 264 ESTG-------------SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp ECSC-------------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred ECCC-------------CHHHHHHHHHHHhcCCEEEEeCC
Confidence 5321 12457788899999999887653
No 315
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.19 E-value=0.0071 Score=53.19 Aligned_cols=78 Identities=13% Similarity=0.100 Sum_probs=61.7
Q ss_pred CcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC----------------CCC
Q 025475 51 SRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF----------------EDE 114 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~----------------~~~ 114 (252)
.+++|+.||.|.+...+...|...+.++|+++.+.+.-+.++...+...+++.|+.++... .-.
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~~~ 168 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHIP 168 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHHHSC
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhhcCC
Confidence 4899999999999999998887679999999999999998875445667788888765310 113
Q ss_pred CeeEEEeccchhhh
Q 025475 115 SFDAVIDKGTLDSL 128 (252)
Q Consensus 115 ~~D~v~~~~~l~~~ 128 (252)
.+|+++...++..+
T Consensus 169 ~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 169 EHDVLLAGFPCQPF 182 (482)
T ss_dssp CCSEEEEECCCCCC
T ss_pred CCCEEEecCCCcch
Confidence 58999988776654
No 316
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.16 E-value=0.0041 Score=51.25 Aligned_cols=63 Identities=22% Similarity=0.269 Sum_probs=43.5
Q ss_pred CCeEEEccccCC-CCCCCCCeeEEEeccchhhhc-CCC-C-----------ChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 97 QLKYLQMDVRDM-SFFEDESFDAVIDKGTLDSLM-CGT-N-----------APISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 97 ~v~~~~~d~~~~-~~~~~~~~D~v~~~~~l~~~~-~~~-~-----------~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.++++++|..+. ..+++++||+|+++.++.... ... . .......+++++.++|+|||.+++..
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 568999998873 335678999999999875320 000 0 00123567889999999999988764
No 317
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.90 E-value=0.023 Score=46.81 Aligned_cols=104 Identities=20% Similarity=0.225 Sum_probs=61.6
Q ss_pred CcEEEEcccCcHhHHHHHH----cC-C--CcEEEEeCC------------HHHHHHHHHhhcC--CC--CCeEEEccccC
Q 025475 51 SRVLMVGCGNALMSEDMVK----DG-Y--EDIVNIDIS------------SVAIDMMKMKYEE--IP--QLKYLQMDVRD 107 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~----~~-~--~~v~~vD~s------------~~~i~~a~~~~~~--~~--~v~~~~~d~~~ 107 (252)
.+|||+|-|+|.+...... .+ . -+++.+|.. ....+........ .+ .+++..+|+.+
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 4899999999986544332 12 2 246677642 1222222222211 12 34567788765
Q ss_pred C-CCCCCCCeeEEEeccchhhhcCCC-CChhhH-HHHHHHHHHcccCCcEEEEEEcCC
Q 025475 108 M-SFFEDESFDAVIDKGTLDSLMCGT-NAPISA-SQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 108 ~-~~~~~~~~D~v~~~~~l~~~~~~~-~~~~~~-~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
. +.+....+|+++... |++ .+|+.. ..+++.++++++|||++. +++.
T Consensus 178 ~l~~l~~~~~Da~flDg------FsP~kNPeLWs~e~f~~l~~~~~pgg~la--TYta 227 (308)
T 3vyw_A 178 RIKEVENFKADAVFHDA------FSPYKNPELWTLDFLSLIKERIDEKGYWV--SYSS 227 (308)
T ss_dssp HGGGCCSCCEEEEEECC------SCTTTSGGGGSHHHHHHHHTTEEEEEEEE--ESCC
T ss_pred HHhhhcccceeEEEeCC------CCcccCcccCCHHHHHHHHHHhCCCcEEE--EEeC
Confidence 3 324455799999874 222 233332 688999999999999875 4443
No 318
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.90 E-value=0.013 Score=50.59 Aligned_cols=60 Identities=8% Similarity=0.206 Sum_probs=47.7
Q ss_pred CCCCcEEEEcccCcHhHHHHH-Hc-C-CCcEEEEeCCHHHHHHHHHhhcC-----C-CCCeEEEccccC
Q 025475 48 PTSSRVLMVGCGNALMSEDMV-KD-G-YEDIVNIDISSVAIDMMKMKYEE-----I-PQLKYLQMDVRD 107 (252)
Q Consensus 48 ~~~~~vLD~G~G~G~~~~~l~-~~-~-~~~v~~vD~s~~~i~~a~~~~~~-----~-~~v~~~~~d~~~ 107 (252)
+++..++|+||+.|..+..++ .. + ..+|+++|++|...+..+++.+. . ++++++..-+.+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 577799999999999999887 44 3 36999999999999999998754 3 466666655544
No 319
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.88 E-value=0.043 Score=46.07 Aligned_cols=99 Identities=18% Similarity=0.222 Sum_probs=65.6
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----C-CCCCCeeE
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----F-FEDESFDA 118 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~-~~~~~~D~ 118 (252)
.+.++.+||-+|+|. |..+..+++. |..+|+++|.+++-++.+++.-. ..++..+-.++. . .....+|+
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa----~~vi~~~~~~~~~~v~~~t~g~g~D~ 238 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA----TDIINYKNGDIVEQILKATDGKGVDK 238 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC----CEEECGGGSCHHHHHHHHTTTCCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC----ceEEcCCCcCHHHHHHHHcCCCCCCE
Confidence 356788999999875 7888888876 55589999999998888877532 122221111110 0 12336999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
|+..-.- ...+..+.++|+++|.+++....
T Consensus 239 v~d~~g~-------------~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 239 VVIAGGD-------------VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp EEECSSC-------------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred EEECCCC-------------hHHHHHHHHHHhcCCEEEEeccc
Confidence 9963211 13577788899999999876543
No 320
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.79 E-value=0.016 Score=48.19 Aligned_cols=54 Identities=15% Similarity=0.165 Sum_probs=45.1
Q ss_pred HHHHHhhCCCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCH---HHHHHHHHhhcC
Q 025475 40 RPFVRKYIPTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISS---VAIDMMKMKYEE 94 (252)
Q Consensus 40 ~~~~~~~~~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~---~~i~~a~~~~~~ 94 (252)
..++.....++..|||.-||+|..+......|. +++|+|+++ ..++.+++++..
T Consensus 233 ~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 233 ERLVRALSHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp HHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC--
T ss_pred HHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHH
Confidence 445555567888999999999999999998875 899999999 999999998754
No 321
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.70 E-value=0.048 Score=46.19 Aligned_cols=98 Identities=17% Similarity=0.222 Sum_probs=65.1
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEc---cc----cCCCCCCCCCe
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM---DV----RDMSFFEDESF 116 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~---d~----~~~~~~~~~~~ 116 (252)
.+.++.+||-.|+|. |..+..+++. |..+|+++|.++.-.+.+++.-.. .++.. |. .+......+.+
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~----~vi~~~~~~~~~~i~~~~~~~~gg~ 254 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGAT----ATVDPSAGDVVEAIAGPVGLVPGGV 254 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS----EEECTTSSCHHHHHHSTTSSSTTCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC----EEECCCCcCHHHHHHhhhhccCCCC
Confidence 467888999999874 7777777776 555899999999988888775221 22211 11 11000223479
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
|+|+..-. -...++.+.++|++||.+++...
T Consensus 255 Dvvid~~G-------------~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 255 DVVIECAG-------------VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp EEEEECSC-------------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CEEEECCC-------------CHHHHHHHHHHhccCCEEEEEec
Confidence 99996321 12457778889999999887653
No 322
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.62 E-value=0.036 Score=46.65 Aligned_cols=98 Identities=17% Similarity=0.182 Sum_probs=63.9
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEcc---ccC----CCCCCCCCe
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMD---VRD----MSFFEDESF 116 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d---~~~----~~~~~~~~~ 116 (252)
.+.++.+||-+|+|. |..+..+++. |..+|+++|.++.-.+.+++.-. -.++..+ ..+ ........+
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa----~~vi~~~~~~~~~~~~~i~~~~~~g~ 243 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA----DLVLQISKESPQEIARKVEGQLGCKP 243 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC----SEEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC----CEEEcCcccccchHHHHHHHHhCCCC
Confidence 367788999999874 7788787775 55589999999998888875422 1222211 011 100111469
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
|+|+..-. -...+..+.++|+++|.+++...
T Consensus 244 D~vid~~g-------------~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 244 EVTIECTG-------------AEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp SEEEECSC-------------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred CEEEECCC-------------ChHHHHHHHHHhcCCCEEEEEec
Confidence 99985321 12346777889999999887653
No 323
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.62 E-value=0.092 Score=44.86 Aligned_cols=109 Identities=11% Similarity=0.142 Sum_probs=65.3
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCC-C----CC-CCCCee
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM-S----FF-EDESFD 117 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~-~----~~-~~~~~D 117 (252)
.+.++.+||.+|+|. |..+..+++. |..+|+++|.+++.++.+++. + ...+..+-.+. . .. ....+|
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G-a~~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA----G-FETIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT----T-CEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----C-CcEEcCCCcchHHHHHHHHhCCCCCC
Confidence 356788999999975 8888888775 655899999999988888753 2 13222111111 0 01 122699
Q ss_pred EEEeccchhhhcCCC-CChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 118 AVIDKGTLDSLMCGT-NAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 118 ~v~~~~~l~~~~~~~-~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+|+..-.-....... .........++.+.++|+++|++++..
T Consensus 257 vvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 257 CGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred EEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 998643211000000 000012345788889999999987654
No 324
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.54 E-value=0.12 Score=44.17 Aligned_cols=109 Identities=12% Similarity=0.188 Sum_probs=66.4
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccC-CC----CC-CCCCee
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD-MS----FF-EDESFD 117 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~-~~----~~-~~~~~D 117 (252)
.+.++.+||-+|+|. |..+..+++. |..+|+++|.+++-++.+++.- ...+...-.+ +. .. ....+|
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lG-----a~~i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG-----FEIADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT-----CEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcC-----CcEEccCCcchHHHHHHHHhCCCCCC
Confidence 466788999999875 8888888876 5557999999999888887642 1222211111 00 01 123699
Q ss_pred EEEeccchhhhcCC--CCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 118 AVIDKGTLDSLMCG--TNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 118 ~v~~~~~l~~~~~~--~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+|+..-.-...... .....+....++.+.++|+++|.+++..
T Consensus 257 vvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 257 CAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred EEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 99975332100000 0000223446788889999999987754
No 325
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.50 E-value=0.065 Score=44.86 Aligned_cols=94 Identities=14% Similarity=0.142 Sum_probs=64.4
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
.+.++.+||-+|+|. |..+..+++. |. +|+++|.+++-.+.+++.- .-.++ .+...+ .. .+|+|+..-
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lG----a~~v~-~~~~~~---~~-~~D~vid~~ 242 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMG----VKHFY-TDPKQC---KE-ELDFIISTI 242 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTT----CSEEE-SSGGGC---CS-CEEEEEECC
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcC----CCeec-CCHHHH---hc-CCCEEEECC
Confidence 467888999999974 7788887776 55 8999999998888887642 22333 332222 22 799999642
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
.-. ..+..+.++|+++|.+++.....
T Consensus 243 g~~-------------~~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 243 PTH-------------YDLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp CSC-------------CCHHHHHTTEEEEEEEEECCCCC
T ss_pred CcH-------------HHHHHHHHHHhcCCEEEEECCCC
Confidence 211 13667778999999998865433
No 326
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.41 E-value=0.11 Score=43.66 Aligned_cols=100 Identities=16% Similarity=0.132 Sum_probs=65.6
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEE-----ccccC-CCC-CCCCCe
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQ-----MDVRD-MSF-FEDESF 116 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~-----~d~~~-~~~-~~~~~~ 116 (252)
.+.++.+||-.|+|. |..+..+++. |...|+++|.+++-.+.+++. .. ..+.+.. .++.+ ... .....+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~-~~~~~~~~~~~~~~~~~~v~~~t~g~g~ 253 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP-EVVTHKVERLSAEESAKKIVESFGGIEP 253 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT-TCEEEECCSCCHHHHHHHHHHHTSSCCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch-hcccccccccchHHHHHHHHHHhCCCCC
Confidence 467888999999874 7788888776 564599999999999999876 32 1112211 11111 000 123469
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
|+|+..-. -...+..+.++|+++|.+++...
T Consensus 254 Dvvid~~g-------------~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 254 AVALECTG-------------VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp SEEEECSC-------------CHHHHHHHHHHSCTTCEEEECCC
T ss_pred CEEEECCC-------------ChHHHHHHHHHhcCCCEEEEEcc
Confidence 99996321 12356778889999999988654
No 327
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.14 E-value=0.23 Score=39.83 Aligned_cols=106 Identities=11% Similarity=0.060 Sum_probs=70.9
Q ss_pred CCCCCcEEEEcccCcHhHHHHHHc-------C-CCcEEEEe-----CCH----------------------HHHHHH---
Q 025475 47 IPTSSRVLMVGCGNALMSEDMVKD-------G-YEDIVNID-----ISS----------------------VAIDMM--- 88 (252)
Q Consensus 47 ~~~~~~vLD~G~G~G~~~~~l~~~-------~-~~~v~~vD-----~s~----------------------~~i~~a--- 88 (252)
..-+..|+|+|+-.|..+..++.. + ..+++++| ..+ +.++..
T Consensus 67 ~~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~ 146 (257)
T 3tos_A 67 LDVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDA 146 (257)
T ss_dssp TTSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHH
T ss_pred hCCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHH
Confidence 344558999999999877776542 2 46899999 221 112211
Q ss_pred HHhh---cC-CCCCeEEEccccCCC-C----CCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 89 KMKY---EE-IPQLKYLQMDVRDMS-F----FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 89 ~~~~---~~-~~~v~~~~~d~~~~~-~----~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.++. .. ..+++++.+++.+.. . .+..++|+|.+..-. - +.....++.+...|+|||++++=+
T Consensus 147 ~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y-------~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 147 HECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--Y-------EPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp HHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--H-------HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred HhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--c-------chHHHHHHHHHHHhCCCcEEEEcC
Confidence 1121 11 147999999987642 1 234579999987642 2 455678889999999999999877
Q ss_pred cC
Q 025475 160 YG 161 (252)
Q Consensus 160 ~~ 161 (252)
+.
T Consensus 218 ~~ 219 (257)
T 3tos_A 218 LD 219 (257)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 328
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.05 E-value=0.19 Score=42.99 Aligned_cols=102 Identities=12% Similarity=0.112 Sum_probs=62.0
Q ss_pred CCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----C-CCCCCeeEE
Q 025475 47 IPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----F-FEDESFDAV 119 (252)
Q Consensus 47 ~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~-~~~~~~D~v 119 (252)
+.++.+||-+|+|. |..+..+++. |..+|+++|.++.-++.+++.-. -.++..+-.++. . .....+|+|
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa----~~vi~~~~~~~~~~i~~~t~g~g~D~v 286 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGA----DHVIDPTKENFVEAVLDYTNGLGAKLF 286 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC----SEEECTTTSCHHHHHHHHTTTCCCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC----CEEEcCCCCCHHHHHHHHhCCCCCCEE
Confidence 56788999999864 7777777776 55589999999998888876532 122221111110 0 123369999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+..-.-. ......+++.+.+.++++|.+++...
T Consensus 287 id~~g~~--------~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 287 LEATGVP--------QLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp EECSSCH--------HHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred EECCCCc--------HHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 9642211 01223333334455699999988654
No 329
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.00 E-value=0.052 Score=46.04 Aligned_cols=97 Identities=18% Similarity=0.223 Sum_probs=63.8
Q ss_pred CCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEcc--ccCCC----CCCCCCeeE
Q 025475 47 IPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMD--VRDMS----FFEDESFDA 118 (252)
Q Consensus 47 ~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d--~~~~~----~~~~~~~D~ 118 (252)
+.++.+||-+|+|. |..+..+++. |..+|+++|.+++-++.+++.-. -.++... -.++. ....+.+|+
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa----~~vi~~~~~~~~~~~~i~~~~~gg~D~ 266 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV----NEFVNPKDHDKPIQEVIVDLTDGGVDY 266 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC----CEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC----cEEEccccCchhHHHHHHHhcCCCCCE
Confidence 56788999999974 7777777776 66589999999988888775421 1222211 01110 012347999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCC-cEEEEEEc
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPG-GIYMLITY 160 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~i~~~ 160 (252)
|+..-. -...++.+.++|++| |.+++...
T Consensus 267 vid~~g-------------~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 267 SFECIG-------------NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp EEECSC-------------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred EEECCC-------------CHHHHHHHHHHhhccCCEEEEEcc
Confidence 996321 134577888999997 99887654
No 330
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.85 E-value=0.023 Score=47.34 Aligned_cols=64 Identities=17% Similarity=0.107 Sum_probs=44.6
Q ss_pred CCeEEEccccC-CCCCCCCCeeEEEeccchhhhc---CCCC----ChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 97 QLKYLQMDVRD-MSFFEDESFDAVIDKGTLDSLM---CGTN----APISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 97 ~v~~~~~d~~~-~~~~~~~~~D~v~~~~~l~~~~---~~~~----~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
...++++|..+ +..++++++|+|+++.++.... .+.. -.......+.+++++|++||.+++..-
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 56788999865 3325678999999998864320 0000 013567889999999999999988653
No 331
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.79 E-value=0.1 Score=44.15 Aligned_cols=96 Identities=21% Similarity=0.248 Sum_probs=61.6
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccC-CCCCCCCCeeEEEec
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD-MSFFEDESFDAVIDK 122 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~-~~~~~~~~~D~v~~~ 122 (252)
.+.++.+||-+|+|. |..+..+++. |. +|+++|.+++-++.+++.-. ..++...-.+ ..... ..+|+|+..
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa----~~vi~~~~~~~~~~~~-~g~Dvvid~ 264 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGA----DEVVNSRNADEMAAHL-KSFDFILNT 264 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTC----SEEEETTCHHHHHTTT-TCEEEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC----cEEeccccHHHHHHhh-cCCCEEEEC
Confidence 466788999999974 7777777775 55 79999999988888876421 1222211001 01012 469999864
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
-.-. ..++.+.++|+++|.+++...
T Consensus 265 ~g~~-------------~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 265 VAAP-------------HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp CSSC-------------CCHHHHHTTEEEEEEEEECCC
T ss_pred CCCH-------------HHHHHHHHHhccCCEEEEecc
Confidence 2211 135667789999999887543
No 332
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.76 E-value=0.094 Score=43.70 Aligned_cols=97 Identities=12% Similarity=0.203 Sum_probs=64.0
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC-C--CCCCeeEEE
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF-F--EDESFDAVI 120 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~-~--~~~~~D~v~ 120 (252)
.+.++.+||-.|+|. |..+..+++. |. +|+++|.+++-.+.+++.-. -.++...-.+... . ..+.+|+|+
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa----~~~i~~~~~~~~~~~~~~~g~~d~vi 237 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGA----EVAVNARDTDPAAWLQKEIGGAHGVL 237 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC----SEEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCC----CEEEeCCCcCHHHHHHHhCCCCCEEE
Confidence 356788999999974 8888888876 55 99999999998888876422 1222211111100 0 113689988
Q ss_pred eccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 121 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
.... -...++.+.++|+++|.+++...
T Consensus 238 d~~g-------------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 238 VTAV-------------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp ESSC-------------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred EeCC-------------CHHHHHHHHHHhccCCEEEEeCC
Confidence 5321 13357778889999999887643
No 333
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.53 E-value=0.16 Score=43.13 Aligned_cols=97 Identities=21% Similarity=0.236 Sum_probs=62.4
Q ss_pred CCCCCcEEEEccc-CcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEcc---ccC----CCCC-CCCCe
Q 025475 47 IPTSSRVLMVGCG-NALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMD---VRD----MSFF-EDESF 116 (252)
Q Consensus 47 ~~~~~~vLD~G~G-~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d---~~~----~~~~-~~~~~ 116 (252)
+.++.+||-.|+| .|..+..+++. |..+|++++.+++-++.+++.- .-.++..+ -.+ .... ....+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG----a~~vi~~~~~~~~~~~~~v~~~~~g~g~ 268 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG----ADLTLNRRETSVEERRKAIMDITHGRGA 268 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTT----CSEEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcC----CcEEEeccccCcchHHHHHHHHhCCCCC
Confidence 5677899999976 47777777776 5359999999999888887542 11233221 011 1001 22369
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
|+|+..-.- ...++.+.++|+++|.+++...
T Consensus 269 Dvvid~~g~-------------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 269 DFILEATGD-------------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp EEEEECSSC-------------TTHHHHHHHHEEEEEEEEECCC
T ss_pred cEEEECCCC-------------HHHHHHHHHHHhcCCEEEEEec
Confidence 999964221 1246677889999999887653
No 334
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.41 E-value=0.18 Score=42.41 Aligned_cols=95 Identities=19% Similarity=0.220 Sum_probs=62.9
Q ss_pred CCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC-----CCCCCeeEE
Q 025475 47 IPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF-----FEDESFDAV 119 (252)
Q Consensus 47 ~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~-----~~~~~~D~v 119 (252)
+.++.+||-+|+|. |..+..+++. |. +++++|.+++-++.+++.-. -.++..+..++.+ .....+|+|
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa----~~vi~~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGA----DHGINRLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTC----SEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCC----CEEEcCCcccHHHHHHHHhCCCCceEE
Confidence 56788999999874 7777777776 55 89999999998888876522 1233211111100 123369999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+..-. ...+..+.++|+++|.+++...
T Consensus 262 id~~g--------------~~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 262 LEIAG--------------GAGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp EEETT--------------SSCHHHHHHHEEEEEEEEEECC
T ss_pred EECCC--------------hHHHHHHHHHhhcCCEEEEEec
Confidence 86422 1236667788999999988754
No 335
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.41 E-value=0.36 Score=40.08 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=63.2
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC-----CCCCCeeE
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF-----FEDESFDA 118 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~-----~~~~~~D~ 118 (252)
...++.+||-.|+|. |.++..+++. |...++++|.+++-++.+++.- ....+.-+-.+..+ -....+|+
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lG----a~~~i~~~~~~~~~~~~~~~~~~g~d~ 232 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFG----AMQTFNSSEMSAPQMQSVLRELRFNQL 232 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT----CSEEEETTTSCHHHHHHHHGGGCSSEE
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcC----CeEEEeCCCCCHHHHHHhhcccCCccc
Confidence 356788999999974 6666666665 6667899999999888887652 22333221111110 12245788
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
|+..-. -...++.+.++|+++|.+++....
T Consensus 233 v~d~~G-------------~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 233 ILETAG-------------VPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp EEECSC-------------SHHHHHHHHHHCCTTCEEEECCCC
T ss_pred cccccc-------------ccchhhhhhheecCCeEEEEEecc
Confidence 875321 134567778899999998876543
No 336
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.30 E-value=0.1 Score=43.54 Aligned_cols=97 Identities=9% Similarity=0.179 Sum_probs=65.2
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----CC-CCCCeeE
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FF-EDESFDA 118 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~~-~~~~~D~ 118 (252)
.+.++.+||-.|+|. |..+..+++. |..+|+++|.+++-.+.+++.-. ..++..+- +.. .. ....+|+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa----~~~i~~~~-~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA----DAAVKSGA-GAADAIRELTGGQGATA 242 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC----SEEEECST-THHHHHHHHHGGGCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC----CEEEcCCC-cHHHHHHHHhCCCCCeE
Confidence 467888999999974 7888888775 45699999999998888876522 12222111 110 01 1236999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
|+..-. -...++.+.++|+++|.+++...
T Consensus 243 v~d~~G-------------~~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 243 VFDFVG-------------AQSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp EEESSC-------------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred EEECCC-------------CHHHHHHHHHHHhcCCEEEEECC
Confidence 996321 12367788899999999887653
No 337
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.15 E-value=0.17 Score=42.71 Aligned_cols=98 Identities=10% Similarity=0.077 Sum_probs=63.3
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccc--cCCC----CCCCCCee
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV--RDMS----FFEDESFD 117 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~--~~~~----~~~~~~~D 117 (252)
.+.++.+||-+|+|. |..+..+++. |..+|+++|.+++-.+.+++.-. -.++..+- .++. ....+.+|
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa----~~vi~~~~~~~~~~~~i~~~t~gg~D 263 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA----TECLNPKDYDKPIYEVICEKTNGGVD 263 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC----SEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC----cEEEecccccchHHHHHHHHhCCCCC
Confidence 356788999999874 7777777775 65589999999988888875421 12222110 0110 01223799
Q ss_pred EEEeccchhhhcCCCCChhhHHHHHHHHHHcccCC-cEEEEEEc
Q 025475 118 AVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPG-GIYMLITY 160 (252)
Q Consensus 118 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~i~~~ 160 (252)
+|+..-. -...+..+.++|+++ |.+++...
T Consensus 264 vvid~~g-------------~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 264 YAVECAG-------------RIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp EEEECSC-------------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred EEEECCC-------------CHHHHHHHHHHHhcCCCEEEEEcc
Confidence 9995321 124577888999999 99887553
No 338
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.07 E-value=0.19 Score=42.28 Aligned_cols=93 Identities=13% Similarity=0.223 Sum_probs=61.9
Q ss_pred CCCcEEEEc-cc-CcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEc--ccc-CCCCCCCCCeeEEEec
Q 025475 49 TSSRVLMVG-CG-NALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM--DVR-DMSFFEDESFDAVIDK 122 (252)
Q Consensus 49 ~~~~vLD~G-~G-~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~--d~~-~~~~~~~~~~D~v~~~ 122 (252)
++.+||-.| +| .|..+..+++. +..+|+++|.+++-++.+++.-. -.++.. +.. .......+.+|+|+..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGa----d~vi~~~~~~~~~v~~~~~~g~Dvvid~ 246 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGA----HHVIDHSKPLAAEVAALGLGAPAFVFST 246 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTC----SEEECTTSCHHHHHHTTCSCCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCC----CEEEeCCCCHHHHHHHhcCCCceEEEEC
Confidence 566899998 55 58899999886 55599999999988888876421 122211 110 0111233579999853
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEE
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 158 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~ 158 (252)
- .-...++.+.++|+++|.+++.
T Consensus 247 ~-------------g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 247 T-------------HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp S-------------CHHHHHHHHHHHSCTTCEEEEC
T ss_pred C-------------CchhhHHHHHHHhcCCCEEEEE
Confidence 2 2234577888999999999876
No 339
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.98 E-value=0.2 Score=42.19 Aligned_cols=97 Identities=14% Similarity=0.150 Sum_probs=62.7
Q ss_pred CCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccc--cCCC----CCCCCCeeE
Q 025475 47 IPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV--RDMS----FFEDESFDA 118 (252)
Q Consensus 47 ~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~--~~~~----~~~~~~~D~ 118 (252)
+.++.+||-+|+|. |..+..+++. |..+|+++|.+++-.+.+++.-. -.++...- .++. ....+.+|+
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa----~~vi~~~~~~~~~~~~v~~~~~~g~D~ 263 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA----TECINPQDFSKPIQEVLIEMTDGGVDY 263 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC----SEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC----ceEeccccccccHHHHHHHHhCCCCCE
Confidence 56788999999874 7777777765 65589999999988888875421 12221110 0110 011236999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCC-cEEEEEEc
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPG-GIYMLITY 160 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~i~~~ 160 (252)
|+..-. -...++.+.++|+++ |.+++...
T Consensus 264 vid~~g-------------~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 264 SFECIG-------------NVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp EEECSC-------------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred EEECCC-------------cHHHHHHHHHhhccCCcEEEEEec
Confidence 985321 123577888999999 99887553
No 340
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.93 E-value=0.38 Score=40.15 Aligned_cols=97 Identities=20% Similarity=0.203 Sum_probs=62.5
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccc-cCCC-C----CC---CC
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV-RDMS-F----FE---DE 114 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~-~~~~-~----~~---~~ 114 (252)
.+.++.+||-.|+|. |..+..+++. |. +|+++|.+++-.+.+++.-. -.++..+- .+.. . .. ..
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa----~~~~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGA----DVTLVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC----SEEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCC----CEEEcCcccccHHHHHHHHhccccCC
Confidence 366788999999874 7777777765 55 69999999998888875421 12222110 1110 0 01 24
Q ss_pred CeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 115 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
.+|+|+..-. -...++.+.++|+++|.+++...
T Consensus 240 g~D~vid~~g-------------~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 240 LPNVTIDCSG-------------NEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp CCSEEEECSC-------------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred CCCEEEECCC-------------CHHHHHHHHHHHhcCCEEEEEec
Confidence 6999985421 12346777889999999887653
No 341
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.89 E-value=0.2 Score=38.09 Aligned_cols=93 Identities=18% Similarity=0.245 Sum_probs=59.1
Q ss_pred hCCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC------C-CCCCC
Q 025475 46 YIPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------F-FEDES 115 (252)
Q Consensus 46 ~~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~------~-~~~~~ 115 (252)
.+.++.+||..|+ |.|..+..++.. |. +|+++|.+++..+.+++. +.... .|..+.. . .....
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~----g~~~~--~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRL----GVEYV--GDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTT----CCSEE--EETTCSTHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----CCCEE--eeCCcHHHHHHHHHHhCCCC
Confidence 3567889999995 456666655554 65 899999999877766542 11111 2332211 0 12246
Q ss_pred eeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 116 FDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 116 ~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+|+|+.+.. ...++.+.+.|+++|++++..
T Consensus 108 ~D~vi~~~g--------------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 108 VDVVLNSLA--------------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEEEECCC--------------THHHHHHHHTEEEEEEEEECS
T ss_pred CeEEEECCc--------------hHHHHHHHHHhccCCEEEEEc
Confidence 999995421 135677889999999988754
No 342
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=93.82 E-value=0.37 Score=38.98 Aligned_cols=107 Identities=13% Similarity=0.144 Sum_probs=70.9
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---------CCCCee
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDESFD 117 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~~~D 117 (252)
++++|--|++.|. .+..|++.|. +|+.+|.+++.++.+.+.+. .++..+++|+.+.... .-++.|
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIG--GGAVGIQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5688888987764 6667777786 89999999988877666553 3678889999875311 125789
Q ss_pred EEEeccchhhh-cCCCCChhhHHHH-----------HHHHHHcccCCcEEEEEE
Q 025475 118 AVIDKGTLDSL-MCGTNAPISASQM-----------LGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 118 ~v~~~~~l~~~-~~~~~~~~~~~~~-----------l~~~~~~L~~gG~l~i~~ 159 (252)
+++.+...... .+..-++++..+. .+.+...|+.+|.++.+.
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 99987654332 1222344444333 355567777888766644
No 343
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.78 E-value=0.27 Score=40.99 Aligned_cols=95 Identities=17% Similarity=0.209 Sum_probs=60.8
Q ss_pred CCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----CC-CCCCeeEEEe
Q 025475 49 TSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FF-EDESFDAVID 121 (252)
Q Consensus 49 ~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~~-~~~~~D~v~~ 121 (252)
++.+||-+|+|. |..+..+++. |..+|+++|.+++-++.+++.-. ..++..+-.++. .. ....+|+|+.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga----~~~~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA----DYVINPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC----SEEECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC----CEEECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 778999999963 7777777765 55489999999988888875421 122211111110 01 1236999996
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
.-. ....++.+.++|+++|.++....
T Consensus 243 ~~g-------------~~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 243 FSG-------------APKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp CSC-------------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCC-------------CHHHHHHHHHHHhcCCEEEEEcc
Confidence 422 12356777889999999887553
No 344
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.76 E-value=0.25 Score=42.11 Aligned_cols=45 Identities=16% Similarity=0.230 Sum_probs=34.4
Q ss_pred CCcEEEEcccCcHhHHHHHHc--------CCCcEEEEeCCHHHHHHHHHhhcC
Q 025475 50 SSRVLMVGCGNALMSEDMVKD--------GYEDIVNIDISSVAIDMMKMKYEE 94 (252)
Q Consensus 50 ~~~vLD~G~G~G~~~~~l~~~--------~~~~v~~vD~s~~~i~~a~~~~~~ 94 (252)
+.+|+|+|+|.|.++..+++. ...+++.||+|+...+.=++.+..
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 347999999999998888753 133899999999887765555543
No 345
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.74 E-value=0.22 Score=42.09 Aligned_cols=97 Identities=12% Similarity=0.124 Sum_probs=62.2
Q ss_pred CCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccc--cCCC----CCCCCCeeE
Q 025475 47 IPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV--RDMS----FFEDESFDA 118 (252)
Q Consensus 47 ~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~--~~~~----~~~~~~~D~ 118 (252)
+.++.+||-+|+|. |..+..+++. |..+|+++|.+++-++.+++.-. -.++..+- .++. ....+.+|+
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa----~~vi~~~~~~~~~~~~~~~~~~~g~D~ 264 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA----TECVNPQDYKKPIQEVLTEMSNGGVDF 264 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC----SEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC----ceEecccccchhHHHHHHHHhCCCCcE
Confidence 56788999999874 7777777765 55479999999988888865421 12221110 0110 012236999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCC-cEEEEEEc
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPG-GIYMLITY 160 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~i~~~ 160 (252)
|+..-. -...+..+.++|+++ |.+++...
T Consensus 265 vid~~g-------------~~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 265 SFEVIG-------------RLDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp EEECSC-------------CHHHHHHHHHHBCTTTCEEEECSC
T ss_pred EEECCC-------------CHHHHHHHHHHhhcCCcEEEEecc
Confidence 985321 123567788899999 99887543
No 346
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.74 E-value=0.17 Score=42.67 Aligned_cols=95 Identities=15% Similarity=0.249 Sum_probs=62.4
Q ss_pred CCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccC----CC----CCCCCCe
Q 025475 47 IPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD----MS----FFEDESF 116 (252)
Q Consensus 47 ~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~----~~----~~~~~~~ 116 (252)
+.++.+||-+|+|. |..+..+++. |..+|+++|.+++-++.+++.-. -.++ |..+ +. ....+.+
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa----~~vi--~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA----TDFV--NPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC----CEEE--CGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCC----ceEE--eccccchhHHHHHHHHhCCCC
Confidence 56778999999864 7777777775 55479999999988888875421 1222 2221 10 0112369
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCC-cEEEEEEc
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPG-GIYMLITY 160 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~i~~~ 160 (252)
|+|+..-. ....++.+.++|+++ |.+++...
T Consensus 264 D~vid~~g-------------~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 264 DFSLECVG-------------NVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp SEEEECSC-------------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred CEEEECCC-------------CHHHHHHHHHHhhcCCcEEEEEcC
Confidence 99985321 123577888999999 99887653
No 347
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.66 E-value=0.12 Score=43.62 Aligned_cols=95 Identities=20% Similarity=0.188 Sum_probs=62.5
Q ss_pred CCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccC----CC----CCCCCCe
Q 025475 47 IPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD----MS----FFEDESF 116 (252)
Q Consensus 47 ~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~----~~----~~~~~~~ 116 (252)
+.++.+||-+|+|. |..+..+++. |..+|+++|.+++-.+.+++.-. -.++ |..+ +. ....+.+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa----~~vi--~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA----TDCL--NPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC----SEEE--CGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC----cEEE--ccccccchHHHHHHHHhCCCc
Confidence 56788999999874 7777777776 55589999999988888865421 1222 2211 10 0112369
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCC-cEEEEEEc
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPG-GIYMLITY 160 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~i~~~ 160 (252)
|+|+..-. -...++.+.++|+++ |.+++...
T Consensus 267 Dvvid~~G-------------~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 267 DYSLDCAG-------------TAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SEEEESSC-------------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred cEEEECCC-------------CHHHHHHHHHHhhcCCCEEEEECC
Confidence 99985321 124577888999999 99887553
No 348
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.53 E-value=0.45 Score=38.66 Aligned_cols=110 Identities=15% Similarity=0.146 Sum_probs=67.2
Q ss_pred CCCcEEEEcccC----c-HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---------CCC
Q 025475 49 TSSRVLMVGCGN----A-LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDE 114 (252)
Q Consensus 49 ~~~~vLD~G~G~----G-~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~ 114 (252)
.++++|-.|++. | .++..+++.|. +|+.++.++...+.+++.....+++.++.+|+.+.... .-+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 356889999763 3 36666777776 89999999765555554443334678899999875311 124
Q ss_pred CeeEEEeccchhhh-----cCCCCChhhH-----------HHHHHHHHHcccCCcEEEEEE
Q 025475 115 SFDAVIDKGTLDSL-----MCGTNAPISA-----------SQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 115 ~~D~v~~~~~l~~~-----~~~~~~~~~~-----------~~~l~~~~~~L~~gG~l~i~~ 159 (252)
..|++|.+..+... .....+.++. ..+++.+...++++|.++.+.
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 78999987653320 0001122332 234455667777788877655
No 349
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.50 E-value=0.77 Score=32.70 Aligned_cols=93 Identities=14% Similarity=0.164 Sum_probs=57.8
Q ss_pred CcEEEEcccC-cH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC---CCCCCeeEEEeccch
Q 025475 51 SRVLMVGCGN-AL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF---FEDESFDAVIDKGTL 125 (252)
Q Consensus 51 ~~vLD~G~G~-G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~---~~~~~~D~v~~~~~l 125 (252)
.+|+-+|+|. |. ++..+.+.|. +++++|.+++.++.++.. .+.++.+|..+... ..-..+|+|++...
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~-----g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~- 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRER-----GVRAVLGNAANEEIMQLAHLECAKWLILTIP- 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-----TCEEEESCTTSHHHHHHTTGGGCSEEEECCS-
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHc-----CCCEEECCCCCHHHHHhcCcccCCEEEEECC-
Confidence 4799999974 54 3444445565 899999999988877652 46788888876431 12246898886422
Q ss_pred hhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 126 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
++.. ...+-...+.+.|+..++...
T Consensus 81 --------~~~~-n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 81 --------NGYE-AGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp --------CHHH-HHHHHHHHHHHCSSSEEEEEE
T ss_pred --------ChHH-HHHHHHHHHHHCCCCeEEEEE
Confidence 1121 122223445567777766544
No 350
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.08 E-value=0.37 Score=40.38 Aligned_cols=93 Identities=22% Similarity=0.330 Sum_probs=60.9
Q ss_pred CCCC------CcEEEEccc-CcHhH-HHHH-Hc-CCCcEEEEeCCHH---HHHHHHHhhcCCCCCeEEEccccCCC----
Q 025475 47 IPTS------SRVLMVGCG-NALMS-EDMV-KD-GYEDIVNIDISSV---AIDMMKMKYEEIPQLKYLQMDVRDMS---- 109 (252)
Q Consensus 47 ~~~~------~~vLD~G~G-~G~~~-~~l~-~~-~~~~v~~vD~s~~---~i~~a~~~~~~~~~v~~~~~d~~~~~---- 109 (252)
+.++ .+||-+|+| .|..+ ..++ +. |..+|+++|.+++ -.+.+++.- ...+ |..+..
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lG-----a~~v--~~~~~~~~~i 236 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELD-----ATYV--DSRQTPVEDV 236 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTT-----CEEE--ETTTSCGGGH
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcC-----Cccc--CCCccCHHHH
Confidence 4567 899999986 37777 7887 55 5534999999887 777776532 1222 322211
Q ss_pred -CCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 110 -FFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 110 -~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
.. .+.+|+|+..-. -...++.+.++|+++|.++....
T Consensus 237 ~~~-~gg~Dvvid~~g-------------~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 237 PDV-YEQMDFIYEATG-------------FPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp HHH-SCCEEEEEECSC-------------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred HHh-CCCCCEEEECCC-------------ChHHHHHHHHHHhcCCEEEEEeC
Confidence 01 236999985321 12356778889999999887653
No 351
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.07 E-value=0.55 Score=39.01 Aligned_cols=93 Identities=14% Similarity=0.113 Sum_probs=61.6
Q ss_pred hCCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC------C-CCCCC
Q 025475 46 YIPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------F-FEDES 115 (252)
Q Consensus 46 ~~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~------~-~~~~~ 115 (252)
.+.++.+||-.|+ |.|..+..++.. |. ++++++.+++.++.+++.-. ..+ .|..+.. . .....
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga----~~~--~d~~~~~~~~~~~~~~~~~~ 235 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGA----DET--VNYTHPDWPKEVRRLTGGKG 235 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTC----SEE--EETTSTTHHHHHHHHTTTTC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCC----CEE--EcCCcccHHHHHHHHhCCCC
Confidence 3567789999998 568877777765 55 89999999998888865311 122 2322211 0 11246
Q ss_pred eeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 116 FDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 116 ~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+|+|+.... . ..++.+.++|+++|.+++..
T Consensus 236 ~d~vi~~~g-~-------------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 236 ADKVVDHTG-A-------------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EEEEEESSC-S-------------SSHHHHHHHEEEEEEEEESS
T ss_pred ceEEEECCC-H-------------HHHHHHHHhhccCCEEEEEe
Confidence 999996432 1 23667778899999987754
No 352
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.06 E-value=0.66 Score=36.83 Aligned_cols=109 Identities=9% Similarity=0.083 Sum_probs=66.5
Q ss_pred CCcEEEEccc--C--cH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCCCCCC---------C
Q 025475 50 SSRVLMVGCG--N--AL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFFE---------D 113 (252)
Q Consensus 50 ~~~vLD~G~G--~--G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~~~~~---------~ 113 (252)
+.++|-.|++ . |. ++..+++.|. +|++++.++...+.+++..... .++.++.+|+.+..... .
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 5678888876 3 32 6667777776 8999998875555554444322 26899999998864211 1
Q ss_pred CCeeEEEeccchhhh-----cCCCCChhhHH-----------HHHHHHHHcccCCcEEEEEE
Q 025475 114 ESFDAVIDKGTLDSL-----MCGTNAPISAS-----------QMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~-----~~~~~~~~~~~-----------~~l~~~~~~L~~gG~l~i~~ 159 (252)
+..|+++.+...... .....+.++.. .+++.+...++++|.++.+.
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 468998887543320 00011223332 34556677778888877765
No 353
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.04 E-value=0.64 Score=38.59 Aligned_cols=94 Identities=14% Similarity=0.163 Sum_probs=62.0
Q ss_pred hCCCCCcEEEEccc-CcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC------CCCCCCee
Q 025475 46 YIPTSSRVLMVGCG-NALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------FFEDESFD 117 (252)
Q Consensus 46 ~~~~~~~vLD~G~G-~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~------~~~~~~~D 117 (252)
.+.++.+||-+|+| .|..+..+++. |. +|+++|.++.-++.+++.-. ..+ .|..+.. ... +.+|
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa----~~~--~d~~~~~~~~~~~~~~-~~~d 232 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGA----DLV--VNPLKEDAAKFMKEKV-GGVH 232 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTC----SEE--ECTTTSCHHHHHHHHH-SSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCC----CEE--ecCCCccHHHHHHHHh-CCCC
Confidence 46778899999986 47777777665 55 99999999998888875311 122 2322111 001 4699
Q ss_pred EEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 118 AVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 118 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+|+.... ....++.+.++|+++|.+++...
T Consensus 233 ~vid~~g-------------~~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 233 AAVVTAV-------------SKPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp EEEESSC-------------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCC-------------CHHHHHHHHHHhhcCCEEEEecc
Confidence 9986422 12356778889999999887543
No 354
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=92.92 E-value=0.19 Score=48.09 Aligned_cols=75 Identities=13% Similarity=0.161 Sum_probs=56.8
Q ss_pred CcEEEEcccCcHhHHHHHHcCC-CcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCC------------C--CC-CCC
Q 025475 51 SRVLMVGCGNALMSEDMVKDGY-EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM------------S--FF-EDE 114 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~~~-~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~------------~--~~-~~~ 114 (252)
.+++|+-||.|.++.-+...|. ..+.++|+++.+++..+.++. +..++..|+.++ . .+ ..+
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p---~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~ 617 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP---GSTVFTEDCNILLKLVMAGETTNSRGQRLPQKG 617 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT---TSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTT
T ss_pred CeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---CCccccccHHHHhhhccchhhhhhhhhhcccCC
Confidence 4899999999999999999886 568899999999998888863 456666665321 1 01 235
Q ss_pred CeeEEEeccchhhh
Q 025475 115 SFDAVIDKGTLDSL 128 (252)
Q Consensus 115 ~~D~v~~~~~l~~~ 128 (252)
.+|+|+.......+
T Consensus 618 ~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 618 DVEMLCGGPPCQGF 631 (1002)
T ss_dssp TCSEEEECCCCTTC
T ss_pred CeeEEEEcCCCcch
Confidence 68999998877654
No 355
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.86 E-value=0.74 Score=37.98 Aligned_cols=92 Identities=15% Similarity=0.135 Sum_probs=60.1
Q ss_pred CCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC-------CCCCCe
Q 025475 47 IPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF-------FEDESF 116 (252)
Q Consensus 47 ~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~-------~~~~~~ 116 (252)
+.++.+||..|+ |.|..+..++.. |. +|+++|.+++.++.+++.- ... ..|..+... ...+.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g----~~~--~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIG----FDA--AFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT----CSE--EEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcC----CcE--EEecCCHHHHHHHHHHHhCCCC
Confidence 567789999998 457766666654 55 8999999998888774431 111 123332110 112469
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+|+.+.. . ..+..+.++|+++|.+++..
T Consensus 216 d~vi~~~g-----------~---~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVG-----------G---EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSC-----------H---HHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC-----------h---HHHHHHHHHHhcCCEEEEEe
Confidence 99986422 1 24677889999999988754
No 356
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.84 E-value=0.31 Score=40.58 Aligned_cols=94 Identities=18% Similarity=0.201 Sum_probs=61.8
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc---CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEc----cc-cCCCCCCCCCe
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD---GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM----DV-RDMSFFEDESF 116 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~---~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~----d~-~~~~~~~~~~~ 116 (252)
.+ ++.+||-+|+|. |..+..+++. |. +|+++|.+++-++.+++.-. -.++.. +. .... ....+
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa----~~vi~~~~~~~~~~~~~--~g~g~ 239 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGA----DYVSEMKDAESLINKLT--DGLGA 239 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTC----SEEECHHHHHHHHHHHH--TTCCE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCC----CEEeccccchHHHHHhh--cCCCc
Confidence 45 788999999974 7777777764 44 89999999998888876421 122211 11 1111 12369
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
|+|+..-. -...++.+.++|+++|.+++...
T Consensus 240 D~vid~~g-------------~~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 240 SIAIDLVG-------------TEETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EEEEESSC-------------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred cEEEECCC-------------ChHHHHHHHHHhhcCCEEEEeCC
Confidence 99996422 12356778889999999887543
No 357
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.82 E-value=0.42 Score=39.55 Aligned_cols=94 Identities=12% Similarity=0.091 Sum_probs=61.9
Q ss_pred hCCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC------CCCCCCe
Q 025475 46 YIPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------FFEDESF 116 (252)
Q Consensus 46 ~~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~------~~~~~~~ 116 (252)
.+.++.+||-.|+ |.|..+..++.. |. +|++++.+++-++.+.+.+ +...++ |..+.. ....+.+
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~---g~~~~~--~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEEL---GFDGAI--DYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT---CCSEEE--ETTTSCHHHHHHHHCTTCE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---CCCEEE--ECCCHHHHHHHHHhcCCCc
Confidence 3667889999998 457777777765 56 9999999998888773333 111222 222111 0113469
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+|+.+-. ...+..+.+.|+++|.+++..
T Consensus 220 d~vi~~~g--------------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 220 DVFFDNVG--------------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp EEEEESSC--------------HHHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC--------------cchHHHHHHHHhhCCEEEEEe
Confidence 99986421 135778889999999988754
No 358
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.67 E-value=0.16 Score=42.72 Aligned_cols=98 Identities=18% Similarity=0.154 Sum_probs=61.2
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEcccc-CCC-CCCCCCeeEEEe
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVR-DMS-FFEDESFDAVID 121 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~-~~~-~~~~~~~D~v~~ 121 (252)
.+.++.+||-+|+|. |..+..+++. |. +|+++|.+++-++.+++.-. -.++..+-. +.. ... +.+|+|+.
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa----~~v~~~~~~~~~~~~~~-~~~D~vid 249 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGA----DHYIATLEEGDWGEKYF-DTFDLIVV 249 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTC----SEEEEGGGTSCHHHHSC-SCEEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCC----CEEEcCcCchHHHHHhh-cCCCEEEE
Confidence 466788999999863 7777777765 66 79999999888888876421 122222111 110 012 47999986
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
.-.-. + ...++.+.++|+++|.++....
T Consensus 250 ~~g~~-------~----~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 250 CASSL-------T----DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CCSCS-------T----TCCTTTGGGGEEEEEEEEECCC
T ss_pred CCCCC-------c----HHHHHHHHHHhcCCCEEEEecC
Confidence 43210 0 1124556788999999877543
No 359
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.45 E-value=0.84 Score=36.61 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=66.8
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCC------------HHHHHHHHHhhcC-CCCCeEEEccccCCCCC--
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDIS------------SVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF-- 111 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s------------~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~-- 111 (252)
++++|-.|++.|. ++..+++.|. +|+.+|.+ ...++.+...+.. ..++.++.+|+.+....
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 5578888987653 5666777776 89999987 5555555544432 34788999999875311
Q ss_pred -------CCCCeeEEEeccchhhhcCCCCChhhHH-----------HHHHHHHHcccCCcEEEEEE
Q 025475 112 -------EDESFDAVIDKGTLDSLMCGTNAPISAS-----------QMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 112 -------~~~~~D~v~~~~~l~~~~~~~~~~~~~~-----------~~l~~~~~~L~~gG~l~i~~ 159 (252)
.-+..|+++.+......... .+.++.. .+++.+...|+.+|.++.+.
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAH-LPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTT-CCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCc-CCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 01468999987654322100 1223332 33455667777788876654
No 360
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.32 E-value=0.29 Score=40.68 Aligned_cols=95 Identities=13% Similarity=0.164 Sum_probs=59.8
Q ss_pred CCCCCcEEEEccc--CcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----C-CCCCCeeE
Q 025475 47 IPTSSRVLMVGCG--NALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----F-FEDESFDA 118 (252)
Q Consensus 47 ~~~~~~vLD~G~G--~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~-~~~~~~D~ 118 (252)
+.++.+||-.|+| .|..+..+++. |. +|+++|.+++-++.+++.-. -.++...-.+.. . .....+|+
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga----~~~~~~~~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGA----AYVIDTSTAPLYETVMELTNGIGADA 216 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTC----SEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCC----cEEEeCCcccHHHHHHHHhCCCCCcE
Confidence 5678899999987 57777777765 66 89999999888888876422 122221111110 0 12346999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
|+..-.-. . +....++|+++|.+++...
T Consensus 217 vid~~g~~----------~----~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 217 AIDSIGGP----------D----GNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEESSCHH----------H----HHHHHHTEEEEEEEEECCC
T ss_pred EEECCCCh----------h----HHHHHHHhcCCCEEEEEee
Confidence 99643211 1 1233478999999887654
No 361
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.32 E-value=0.64 Score=38.44 Aligned_cols=95 Identities=15% Similarity=0.186 Sum_probs=61.8
Q ss_pred hCCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----C-CCCCCee
Q 025475 46 YIPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----F-FEDESFD 117 (252)
Q Consensus 46 ~~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~-~~~~~~D 117 (252)
.+.++.+||-.|+ |.|..+..+++. |. ++++++.+++-++.+++.- .-.++..+-.+.. . .....+|
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g----a~~~~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYG----AEYLINASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT----CSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcC----CcEEEeCCCchHHHHHHHHhCCCCce
Confidence 3567889999994 457777777766 55 8999999998888777642 1122221111110 0 1234699
Q ss_pred EEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 118 AVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 118 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+|+..-.- ..++.+.+.|+++|.+++..
T Consensus 220 ~vid~~g~--------------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 220 ASFDSVGK--------------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEECCGG--------------GGHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCh--------------HHHHHHHHHhccCCEEEEEc
Confidence 99964321 34667778999999988754
No 362
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.27 E-value=0.54 Score=39.13 Aligned_cols=95 Identities=21% Similarity=0.344 Sum_probs=61.2
Q ss_pred hCCCCCcEEEEccc--CcHhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC------CCCC-C
Q 025475 46 YIPTSSRVLMVGCG--NALMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------FFED-E 114 (252)
Q Consensus 46 ~~~~~~~vLD~G~G--~G~~~~~l~~~--~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~------~~~~-~ 114 (252)
.+.++.+||-.|+| .|..+..++.. |. +|+++|.+++..+.+++.-. ..++ |..+.. .... +
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~----~~~~--~~~~~~~~~~~~~~~~~~ 239 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGA----DYVI--NASMQDPLAEIRRITESK 239 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTC----SEEE--ETTTSCHHHHHHHHTTTS
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCC----CEEe--cCCCccHHHHHHHHhcCC
Confidence 46678899999997 45666565554 55 89999999988888865421 1222 222211 0112 4
Q ss_pred CeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 115 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
.+|+|+.... -...++.+.++|+++|.+++...
T Consensus 240 ~~d~vi~~~g-------------~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 240 GVDAVIDLNN-------------SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp CEEEEEESCC-------------CHHHHTTGGGGEEEEEEEEECCS
T ss_pred CceEEEECCC-------------CHHHHHHHHHHHhcCCEEEEECC
Confidence 7999996422 12356778899999999887543
No 363
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.07 E-value=0.57 Score=38.59 Aligned_cols=95 Identities=12% Similarity=0.086 Sum_probs=62.1
Q ss_pred CCCCCcEEEEc-c-cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----C-CCCCCeeE
Q 025475 47 IPTSSRVLMVG-C-GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----F-FEDESFDA 118 (252)
Q Consensus 47 ~~~~~~vLD~G-~-G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~-~~~~~~D~ 118 (252)
+.++.+||-.| + |.|..+..+++. |. ++++++.+++-++.+++.-. -.++..+-.+.. . .....+|+
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga----~~~~~~~~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGA----WETIDYSHEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTC----SEEEETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC----CEEEeCCCccHHHHHHHHhCCCCceE
Confidence 56788999998 3 357777777765 66 89999999998888876421 122221111110 0 12346999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
|+..-.- ..+..+.+.|+++|.+++...
T Consensus 213 vid~~g~--------------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 213 VYDGVGQ--------------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEESSCG--------------GGHHHHHTTEEEEEEEEECCC
T ss_pred EEECCCh--------------HHHHHHHHHhcCCCEEEEEec
Confidence 9964321 246677889999999888653
No 364
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.07 E-value=0.55 Score=38.97 Aligned_cols=93 Identities=15% Similarity=0.128 Sum_probs=61.4
Q ss_pred CCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC-------CCCCCe
Q 025475 47 IPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF-------FEDESF 116 (252)
Q Consensus 47 ~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~-------~~~~~~ 116 (252)
+.++.+||-.|+ |.|..+..++.. |. ++++++.+++.++.+++.+ +....+ |..+... ...+.+
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~---g~~~~~--d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKF---GFDDAF--NYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTS---CCSEEE--ETTSCSCSHHHHHHHCTTCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---CCceEE--ecCCHHHHHHHHHHHhCCCC
Confidence 567889999997 467777777665 55 8999999998888876433 111222 3222100 112469
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+|+.+.. . ..+..+.++|+++|.+++..
T Consensus 227 d~vi~~~g------------~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 227 DIYFENVG------------G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEEESSC------------H--HHHHHHHTTEEEEEEEEECC
T ss_pred cEEEECCC------------H--HHHHHHHHHHhcCCEEEEEc
Confidence 99986422 1 25778889999999988754
No 365
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.06 E-value=0.52 Score=38.31 Aligned_cols=109 Identities=14% Similarity=0.147 Sum_probs=65.5
Q ss_pred CCcEEEEccc----CcH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---------CCCC
Q 025475 50 SSRVLMVGCG----NAL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 50 ~~~vLD~G~G----~G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
+.++|-.|++ .|. ++..+++.|. +|++++.++...+..+......+.+.++.+|+.+.... .-+.
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS 108 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5578888874 342 6666777776 89999998755444444433334578899999875311 1147
Q ss_pred eeEEEeccchhhh-----cCCCCChhhH-----------HHHHHHHHHcccCCcEEEEEE
Q 025475 116 FDAVIDKGTLDSL-----MCGTNAPISA-----------SQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 116 ~D~v~~~~~l~~~-----~~~~~~~~~~-----------~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.|+++.+..+... .....+.++. ..+++.+...++.+|.++.+.
T Consensus 109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 8999987653310 0001122333 233455666777788877755
No 366
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.96 E-value=0.12 Score=47.47 Aligned_cols=104 Identities=16% Similarity=0.241 Sum_probs=64.0
Q ss_pred CCCcEEEEcccCcHhHHHHHHc----------C---CCcEEEEeC---CHHHHHHHHHh-----------hcC-------
Q 025475 49 TSSRVLMVGCGNALMSEDMVKD----------G---YEDIVNIDI---SSVAIDMMKMK-----------YEE------- 94 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~----------~---~~~v~~vD~---s~~~i~~a~~~-----------~~~------- 94 (252)
+..+|+|+|-|+|.....+.+. . ..+++.+|. +.+.+..+-.. +..
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 3359999999999877666442 0 146899998 55554443221 111
Q ss_pred -------CC--CCeEEEccccCCC-CCC---CCCeeEEEeccchhhhcCCCCChhh-HHHHHHHHHHcccCCcEEEE
Q 025475 95 -------IP--QLKYLQMDVRDMS-FFE---DESFDAVIDKGTLDSLMCGTNAPIS-ASQMLGEVSRLLKPGGIYML 157 (252)
Q Consensus 95 -------~~--~v~~~~~d~~~~~-~~~---~~~~D~v~~~~~l~~~~~~~~~~~~-~~~~l~~~~~~L~~gG~l~i 157 (252)
.+ .++++.+|+.+.. .+. ...+|+++....--. .+++. ...++..+.+++++||.+..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~-----~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPA-----KNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC-------CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCC-----CChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 01 3567777776532 122 467999998753211 12232 26788999999999998653
No 367
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=91.95 E-value=0.56 Score=37.26 Aligned_cols=110 Identities=11% Similarity=0.115 Sum_probs=65.8
Q ss_pred CCCcEEEEccc--Cc--H-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---------CCC
Q 025475 49 TSSRVLMVGCG--NA--L-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDE 114 (252)
Q Consensus 49 ~~~~vLD~G~G--~G--~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~ 114 (252)
++++||-.|++ .| . ++..+++.|. +|++++.+....+.+++.....+.+.++.+|+.+.... ..+
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 91 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD 91 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56689999965 33 2 5556666676 89999988654444444443345688999999875311 124
Q ss_pred CeeEEEeccchhhh------cCCCCChhhHH-----------HHHHHHHHcccCCcEEEEEE
Q 025475 115 SFDAVIDKGTLDSL------MCGTNAPISAS-----------QMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 115 ~~D~v~~~~~l~~~------~~~~~~~~~~~-----------~~l~~~~~~L~~gG~l~i~~ 159 (252)
..|+++.+...... .....+.++.. .+++.+...++++|.++.+.
T Consensus 92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 92 SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp CEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 78999987654321 00002333333 23455566666778776654
No 368
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.93 E-value=0.59 Score=38.92 Aligned_cols=95 Identities=16% Similarity=0.250 Sum_probs=61.5
Q ss_pred hCCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC-------CCCCC
Q 025475 46 YIPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF-------FEDES 115 (252)
Q Consensus 46 ~~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~-------~~~~~ 115 (252)
.+.++.+||..|+ |.|..+..++.. |. +|+++|.+++..+.+++.- .... .|..+... ...+.
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g----~~~~--~d~~~~~~~~~~~~~~~~~~ 238 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIG----GEVF--IDFTKEKDIVGAVLKATDGG 238 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTT----CCEE--EETTTCSCHHHHHHHHHTSC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcC----CceE--EecCccHhHHHHHHHHhCCC
Confidence 3567889999998 467777666664 55 8999999988777776531 1122 23331110 01126
Q ss_pred eeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 116 FDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 116 ~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+|+|+.+.. ....++.+.+.|+++|.+++...
T Consensus 239 ~D~vi~~~g-------------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 239 AHGVINVSV-------------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEEEEECSS-------------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred CCEEEECCC-------------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 999986422 12357888899999999887653
No 369
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.68 E-value=0.3 Score=44.76 Aligned_cols=102 Identities=16% Similarity=0.244 Sum_probs=63.8
Q ss_pred CcEEEEcccCcHhHHHHHHc------------C-CCcEEEEeC---CHHHHHHHHHhhc-----------CC--------
Q 025475 51 SRVLMVGCGNALMSEDMVKD------------G-YEDIVNIDI---SSVAIDMMKMKYE-----------EI-------- 95 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~------------~-~~~v~~vD~---s~~~i~~a~~~~~-----------~~-------- 95 (252)
.+|+|+|-|+|.+....... . .-+++++|. +++.+..+-..+. ..
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 49999999999866665442 0 135899998 7777664433210 00
Q ss_pred --------CCCeEEEccccCC-CCCC---CCCeeEEEeccchhhhcCCCCChhh-HHHHHHHHHHcccCCcEEEE
Q 025475 96 --------PQLKYLQMDVRDM-SFFE---DESFDAVIDKGTLDSLMCGTNAPIS-ASQMLGEVSRLLKPGGIYML 157 (252)
Q Consensus 96 --------~~v~~~~~d~~~~-~~~~---~~~~D~v~~~~~l~~~~~~~~~~~~-~~~~l~~~~~~L~~gG~l~i 157 (252)
-.+++..+|+.+. +.+. ...+|+++....--.. +++. -..++..+.+++++||.+..
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~-----np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAK-----NPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGG-----CGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcC-----ChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 1234555666543 2121 4679999987532222 3333 36788999999999998654
No 370
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=91.67 E-value=0.76 Score=38.40 Aligned_cols=93 Identities=16% Similarity=0.268 Sum_probs=60.2
Q ss_pred hCCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC------C-CCCCC
Q 025475 46 YIPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------F-FEDES 115 (252)
Q Consensus 46 ~~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~------~-~~~~~ 115 (252)
.+.++.+||-.|+ |.|..+..++.. |. +|++++.+++.++.+++.-. ... .|..+.. . .....
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga----~~~--~d~~~~~~~~~~~~~~~~~~ 239 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGA----HEV--FNHREVNYIDKIKKYVGEKG 239 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC----SEE--EETTSTTHHHHHHHHHCTTC
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCC----CEE--EeCCCchHHHHHHHHcCCCC
Confidence 3567889999997 457766666665 55 89999999988887765321 122 2222211 0 12236
Q ss_pred eeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 116 FDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 116 ~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+|+|+.+.. ...+..+.++|+++|.+++..
T Consensus 240 ~D~vi~~~G--------------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 240 IDIIIEMLA--------------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEEESCH--------------HHHHHHHHHHEEEEEEEEECC
T ss_pred cEEEEECCC--------------hHHHHHHHHhccCCCEEEEEe
Confidence 999986422 124667789999999988755
No 371
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.60 E-value=0.75 Score=37.85 Aligned_cols=93 Identities=12% Similarity=0.100 Sum_probs=60.2
Q ss_pred hCCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC------C-CCCCC
Q 025475 46 YIPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------F-FEDES 115 (252)
Q Consensus 46 ~~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~------~-~~~~~ 115 (252)
.+.++.+||-.|+ |.|..+..++.. |. +++++|.+++..+.+++.-. ...+ |..+.. . .....
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~----~~~~--~~~~~~~~~~~~~~~~~~~ 209 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGA----WQVI--NYREEDLVERLKEITGGKK 209 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTC----SEEE--ETTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC----CEEE--ECCCccHHHHHHHHhCCCC
Confidence 3567889999994 457766666654 66 89999999988887776311 1122 222211 0 12336
Q ss_pred eeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 116 FDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 116 ~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+|+|+.+.. ...++.+.++|+++|.+++..
T Consensus 210 ~D~vi~~~g--------------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 210 VRVVYDSVG--------------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEEECSC--------------GGGHHHHHHTEEEEEEEEECC
T ss_pred ceEEEECCc--------------hHHHHHHHHHhcCCCEEEEEe
Confidence 999986432 124677788999999988754
No 372
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.58 E-value=1.8 Score=35.78 Aligned_cols=107 Identities=9% Similarity=0.074 Sum_probs=68.3
Q ss_pred CCcEEEEcccC-c-HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-------CC-------------CCeEEEccccC
Q 025475 50 SSRVLMVGCGN-A-LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-------IP-------------QLKYLQMDVRD 107 (252)
Q Consensus 50 ~~~vLD~G~G~-G-~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-------~~-------------~v~~~~~d~~~ 107 (252)
..+|.-+|+|+ | .++..++..|. +|+..|++++.++.+..++.. .+ +++. ..|+.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~~ 83 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchHh
Confidence 34799999995 4 46666777777 899999999988877665421 01 1111 111111
Q ss_pred CCCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhhhhhhc
Q 025475 108 MSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHL 170 (252)
Q Consensus 108 ~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~ 170 (252)
. -...|+|+-. +.+ +.+-.+++++++-++++|+-+|.-.+-+-+......-
T Consensus 84 a----~~~ad~ViEa-v~E-------~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~ 134 (319)
T 3ado_A 84 A----VEGVVHIQEC-VPE-------NLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTG 134 (319)
T ss_dssp H----TTTEEEEEEC-CCS-------CHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTT
T ss_pred H----hccCcEEeec-ccc-------HHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhh
Confidence 1 1347887743 233 3378899999999999998877665555555444443
No 373
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=91.51 E-value=0.51 Score=38.16 Aligned_cols=123 Identities=12% Similarity=0.096 Sum_probs=64.9
Q ss_pred ccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhh---cCCCCCeEE-EccccCCCCCCCCCeeEEEeccc----hhhh-
Q 025475 58 CGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKY---EEIPQLKYL-QMDVRDMSFFEDESFDAVIDKGT----LDSL- 128 (252)
Q Consensus 58 ~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~---~~~~~v~~~-~~d~~~~~~~~~~~~D~v~~~~~----l~~~- 128 (252)
++.|.....+.+.....+..||..-.. -.++. .-.+..++. .+|+.+.. ..+.+|+|+++.. .||.
T Consensus 150 ~~~~~~~~~~~k~~g~~vl~v~~~~~~---p~k~v~wi~Pi~GAt~~~~lDfg~p~--~~~k~DvV~SDMApn~sGh~yq 224 (320)
T 2hwk_A 150 HPQSDFSSFVSKLKGRTVLVVGEKLSV---PGKMVDWLSDRPEATFRARLDLGIPG--DVPKYDIIFVNVRTPYKYHHYQ 224 (320)
T ss_dssp CCCCCCHHHHHTSSCSEEEEEESCCCC---TTSEEEEEESSTTCSEECCGGGCSCT--TSCCEEEEEEECCCCCCSCHHH
T ss_pred cCCCCHHHHHhhCCCcEEEEEeccccc---CCceeEeeccCCCceeecccccCCcc--ccCcCCEEEEcCCCCCCCcccc
Confidence 555666666665533366666532110 00000 001233444 67776654 3367999999753 2221
Q ss_pred cCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhhhhhhccccccceeEE-EEEecC
Q 025475 129 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHLKWKVYNWKIE-LYIIAR 186 (252)
Q Consensus 129 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 186 (252)
-| ........-+++-+.++|+|||.+++..+..++-....+.......... ..+.|.
T Consensus 225 QC-~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vKP~ 282 (320)
T 2hwk_A 225 QC-EDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCKPK 282 (320)
T ss_dssp HH-HHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCT
T ss_pred cc-chHHHHHHHHHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeeeCCC
Confidence 00 0000112235677789999999999999998854444444444444433 344444
No 374
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.50 E-value=0.82 Score=36.22 Aligned_cols=108 Identities=13% Similarity=0.280 Sum_probs=67.7
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---------CCCCe
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDESF 116 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~~~ 116 (252)
.++++|-.|++.|. .+..+++.|. +|++++.+++.++...+.+. .++.++.+|+.+.... ..+..
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFG--PRVHALRSDIADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC--CcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 35688888987653 5666677776 89999999987776666552 3678899999875311 11478
Q ss_pred eEEEeccchhhh-cCCCCChhhHH-----------HHHHHHHHcccCCcEEEEEE
Q 025475 117 DAVIDKGTLDSL-MCGTNAPISAS-----------QMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 117 D~v~~~~~l~~~-~~~~~~~~~~~-----------~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+++.+...... .+...+.++.. .+++.+...++++|.++.+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999887543321 00111233332 23455566677788776654
No 375
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.36 E-value=0.93 Score=38.00 Aligned_cols=95 Identities=14% Similarity=0.126 Sum_probs=62.0
Q ss_pred hCCCCCcEEEEc--ccCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----CCCCCCeeE
Q 025475 46 YIPTSSRVLMVG--CGNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FFEDESFDA 118 (252)
Q Consensus 46 ~~~~~~~vLD~G--~G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~~~~~~~D~ 118 (252)
.+.++.+||-.| .|.|..+..++.. |. +|++++.+++-++.+++.- .-.++..+-.+.. ......+|+
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~G----a~~~~~~~~~~~~~~~~~~~~~g~D~ 234 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLG----CDRPINYKTEPVGTVLKQEYPEGVDV 234 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT----CSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcC----CcEEEecCChhHHHHHHHhcCCCCCE
Confidence 366788999999 3468888888776 55 8999999998888877631 1122221111110 011246999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+..-. . ..++.+.++|+++|.+++..
T Consensus 235 vid~~g------------~--~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 235 VYESVG------------G--AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EEECSC------------T--HHHHHHHHHEEEEEEEEECC
T ss_pred EEECCC------------H--HHHHHHHHHHhcCCEEEEEe
Confidence 986421 1 35777889999999987754
No 376
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.24 E-value=0.89 Score=32.21 Aligned_cols=67 Identities=18% Similarity=0.349 Sum_probs=45.6
Q ss_pred CCcEEEEcccC-cH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC---CCCCCeeEEEec
Q 025475 50 SSRVLMVGCGN-AL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF---FEDESFDAVIDK 122 (252)
Q Consensus 50 ~~~vLD~G~G~-G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~---~~~~~~D~v~~~ 122 (252)
..+|+-+|+|. |. ++..+.+.|. +|+++|.+++.++.++.. .+.++.+|..+... ..-..+|+|+..
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE-----GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-----TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC-----CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 34799999974 33 4444455566 899999999988777653 35778888876421 223468988864
No 377
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.24 E-value=1.9 Score=35.49 Aligned_cols=90 Identities=19% Similarity=0.206 Sum_probs=57.9
Q ss_pred CcEEEEcccC--cHhHHHHHHcCC-CcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 51 SRVLMVGCGN--ALMSEDMVKDGY-EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 51 ~~vLD~G~G~--G~~~~~l~~~~~-~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
++|.-+|+|. +.++..+...|. .+|+++|.+++.++.+++. +.+.....+..+. .-...|+|+..-.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~----G~~~~~~~~~~~~---~~~~aDvVilavp--- 103 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GIIDEGTTSIAKV---EDFSPDFVMLSSP--- 103 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TSCSEEESCTTGG---GGGCCSEEEECSC---
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC----CCcchhcCCHHHH---hhccCCEEEEeCC---
Confidence 5799999884 456677777764 3899999999888777643 1111122232220 1235899986532
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEE
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYML 157 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i 157 (252)
+.....+++++...++++..++-
T Consensus 104 -------~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 104 -------VRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp -------GGGHHHHHHHHHHHSCTTCEEEE
T ss_pred -------HHHHHHHHHHHhhccCCCcEEEE
Confidence 34456788888888988876543
No 378
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=91.14 E-value=5.8 Score=32.91 Aligned_cols=109 Identities=10% Similarity=0.139 Sum_probs=74.2
Q ss_pred CCCcEEEEcccCcHhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcC-------------------------CCCCeEE
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEE-------------------------IPQLKYL 101 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~--~~~v~~vD~s~~~i~~a~~~~~~-------------------------~~~v~~~ 101 (252)
+...|+-+|||.=.....+...+ ...++=||. |+.++.=++.+.. .++.+.+
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 45689999999877777776642 336777776 5555543333321 2467888
Q ss_pred EccccCCCC---------CCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChh
Q 025475 102 QMDVRDMSF---------FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 164 (252)
Q Consensus 102 ~~d~~~~~~---------~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~ 164 (252)
.+|+.+... +.....=++++-.++.++ +++...++++.+.+.. ++|.+++.+...|.
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL-----~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~ 234 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYM-----TPEQSANLLKWAANSF-ERAMFINYEQVNMG 234 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGS-----CHHHHHHHHHHHHHHC-SSEEEEEEEECCTT
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCC-----CHHHHHHHHHHHHHhC-CCceEEEEeccCCC
Confidence 999877310 233445678888899999 8899999999999876 56666666765443
No 379
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.06 E-value=3.6 Score=30.42 Aligned_cols=95 Identities=15% Similarity=0.126 Sum_probs=56.5
Q ss_pred CCcEEEEcccC-cH-hHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC---CC-CCCCeeEEEec
Q 025475 50 SSRVLMVGCGN-AL-MSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS---FF-EDESFDAVIDK 122 (252)
Q Consensus 50 ~~~vLD~G~G~-G~-~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~---~~-~~~~~D~v~~~ 122 (252)
+.+|+-+|+|. |. ++..+... |. +|+++|.+++.++.++.. .+..+.+|..+.. .. .-..+|+|+..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~-----g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSE-----GRNVISGDATDPDFWERILDTGHVKLVLLA 112 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHT-----TCCEEECCTTCHHHHHTBCSCCCCCEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHC-----CCCEEEcCCCCHHHHHhccCCCCCCEEEEe
Confidence 45899999874 54 44445555 65 899999999887776543 3566777765421 12 23468988863
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
-. ++..-..++. ..+.+.+++.+++...
T Consensus 113 ~~---------~~~~~~~~~~-~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 113 MP---------HHQGNQTALE-QLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CS---------SHHHHHHHHH-HHHHTTCCSEEEEEES
T ss_pred CC---------ChHHHHHHHH-HHHHHCCCCEEEEEEC
Confidence 21 1122222333 3444566777776543
No 380
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=91.06 E-value=2.2 Score=35.24 Aligned_cols=98 Identities=12% Similarity=0.102 Sum_probs=60.4
Q ss_pred hCCCCCcEEEEcccC-cHhHHHHHH-cCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----C-CCCCCeeE
Q 025475 46 YIPTSSRVLMVGCGN-ALMSEDMVK-DGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----F-FEDESFDA 118 (252)
Q Consensus 46 ~~~~~~~vLD~G~G~-G~~~~~l~~-~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~-~~~~~~D~ 118 (252)
...++.+||-+|+|. |..+..++. .+..+|+++|.+++-++.+++.-.. .++.-.-.+.. . .....+|.
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~----~~i~~~~~~~~~~v~~~t~g~g~d~ 235 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD----VTINSGDVNPVDEIKKITGGLGVQS 235 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS----EEEEC-CCCHHHHHHHHTTSSCEEE
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe----EEEeCCCCCHHHHhhhhcCCCCceE
Confidence 356788999999985 445555554 4556999999999888877765322 22221111110 0 12234777
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
++.... -...+....++|+++|.+++...
T Consensus 236 ~~~~~~-------------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 236 AIVCAV-------------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp EEECCS-------------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred EEEecc-------------CcchhheeheeecCCceEEEEec
Confidence 764321 13457778889999999887553
No 381
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=91.05 E-value=1.5 Score=35.21 Aligned_cols=74 Identities=16% Similarity=0.236 Sum_probs=52.3
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---------CCCCee
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDESFD 117 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~~~D 117 (252)
++++|-.|++.|. ++..+++.|. +|+++|.+++..+.....+ ..++.++.+|+.+.... .-+..|
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKI--GCGAAACRVDVSDEQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH--CSSCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc--CCcceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5578888887653 5666777776 8999999988777666555 24678899999875311 114689
Q ss_pred EEEeccchh
Q 025475 118 AVIDKGTLD 126 (252)
Q Consensus 118 ~v~~~~~l~ 126 (252)
+++.+....
T Consensus 106 ~lvnnAg~~ 114 (277)
T 3gvc_A 106 KLVANAGVV 114 (277)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999876543
No 382
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.01 E-value=0.26 Score=40.47 Aligned_cols=88 Identities=20% Similarity=0.283 Sum_probs=58.2
Q ss_pred CCCCCcEEEEccc-CcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 47 IPTSSRVLMVGCG-NALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 47 ~~~~~~vLD~G~G-~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
++++.+||-.|+| .|..+..+++. |. +|++++ +++-.+.+++.-. -.++. | .... ...+|+|+..-.
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa----~~v~~-d---~~~v-~~g~Dvv~d~~g 208 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGV----RHLYR-E---PSQV-TQKYFAIFDAVN 208 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTE----EEEES-S---GGGC-CSCEEEEECC--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCC----CEEEc-C---HHHh-CCCccEEEECCC
Confidence 5678899999996 47788888776 66 999999 8888888876422 12221 3 2112 457999985321
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
. ..+..+.++|+++|.++...
T Consensus 209 ------------~--~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 ------------S--QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp -------------------TTGGGEEEEEEEEEEC
T ss_pred ------------c--hhHHHHHHHhcCCCEEEEEe
Confidence 0 11255678999999988764
No 383
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=90.98 E-value=0.12 Score=42.83 Aligned_cols=62 Identities=19% Similarity=0.226 Sum_probs=41.9
Q ss_pred CeEE-EccccCC-CCCCCCCeeEEEeccchhhhc--CC--CCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 98 LKYL-QMDVRDM-SFFEDESFDAVIDKGTLDSLM--CG--TNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 98 v~~~-~~d~~~~-~~~~~~~~D~v~~~~~l~~~~--~~--~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
..++ ++|..+. ..++++++|+|++..++.--. +. ..-.......+.+++++|++||.+++..
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 4677 8888653 225667899999998864210 00 0001356778889999999999998865
No 384
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.91 E-value=1.2 Score=37.25 Aligned_cols=93 Identities=11% Similarity=0.032 Sum_probs=59.3
Q ss_pred CCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC------C-CCCCCe
Q 025475 47 IPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------F-FEDESF 116 (252)
Q Consensus 47 ~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~------~-~~~~~~ 116 (252)
+.++.+||-.|+ |.|..+..++.. |. +++++|.+++.++.+++.-. -..+ |..+.. . .....+
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~----~~~~--~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGA----AAGF--NYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTC----SEEE--ETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC----cEEE--ecCChHHHHHHHHHhcCCCc
Confidence 567789999984 457766666655 55 89999999988888754421 1122 222111 0 122469
Q ss_pred eEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 117 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 117 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
|+|+.+..- . .+..+.++|+++|.+++...
T Consensus 233 d~vi~~~G~----------~----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 233 NLILDCIGG----------S----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEEESSCG----------G----GHHHHHHHEEEEEEEEECCC
T ss_pred eEEEECCCc----------h----HHHHHHHhccCCCEEEEEec
Confidence 999864321 1 35667788999999887653
No 385
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.86 E-value=3 Score=33.14 Aligned_cols=63 Identities=10% Similarity=0.171 Sum_probs=44.6
Q ss_pred CcEEEEcccCcHhHHHHHH----cCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 51 SRVLMVGCGNALMSEDMVK----DGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~----~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
++||-.|+ |.++..+++ .|+ +|++++.++........ .+++++.+|+.++. -..+|+|+....
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~---~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRA-----SGAEPLLWPGEEPS---LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHH-----TTEEEEESSSSCCC---CTTCCEEEECCC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhh-----CCCeEEEecccccc---cCCCCEEEECCC
Confidence 58999995 666655554 355 89999998765443332 35789999998864 346899987554
No 386
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.85 E-value=1.3 Score=37.95 Aligned_cols=94 Identities=16% Similarity=0.202 Sum_probs=59.5
Q ss_pred CCcEEEEcccC-cHh-HHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC---CCCCCeeEEEeccc
Q 025475 50 SSRVLMVGCGN-ALM-SEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF---FEDESFDAVIDKGT 124 (252)
Q Consensus 50 ~~~vLD~G~G~-G~~-~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~---~~~~~~D~v~~~~~ 124 (252)
..+|+-+|+|. |.. +..|...|. .|+++|.+++.++.++.. .+.++.+|..+... ..-..+|+|++...
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~-----g~~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF-----GMKVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT-----TCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC-----CCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 45799999874 443 333444465 899999999999888753 46788999887531 22356888886321
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+ ......+-...+.+.|+..+++..
T Consensus 78 ---------~-~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 78 ---------D-PQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp ---------S-HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred ---------C-hHHHHHHHHHHHHhCCCCeEEEEE
Confidence 1 222333344445567777776644
No 387
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.77 E-value=3.2 Score=33.37 Aligned_cols=76 Identities=12% Similarity=0.159 Sum_probs=52.6
Q ss_pred CCCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCC-CC---C------CC
Q 025475 49 TSSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDM-SF---F------ED 113 (252)
Q Consensus 49 ~~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~-~~---~------~~ 113 (252)
.+.+||-.|++.| .++..+++.|. +|++++.++...+.+...+... .++.++.+|+.+. .. + ..
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 3557888888765 25666667776 8999999988776665555332 3688999999886 31 0 12
Q ss_pred CCeeEEEeccch
Q 025475 114 ESFDAVIDKGTL 125 (252)
Q Consensus 114 ~~~D~v~~~~~l 125 (252)
+..|+++.+...
T Consensus 90 g~iD~lv~nAg~ 101 (311)
T 3o26_A 90 GKLDILVNNAGV 101 (311)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 478999987654
No 388
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=90.74 E-value=1.3 Score=36.37 Aligned_cols=90 Identities=16% Similarity=0.249 Sum_probs=59.8
Q ss_pred cEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEc-cccCCCCCCCCCeeEEEeccchhh
Q 025475 52 RVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM-DVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 52 ~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~-d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
+||-.|+ |.|..+..+++. |. +|++++.+++-.+.+++.-. -.++.. +.........+.+|+|+..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa----~~vi~~~~~~~~~~~~~~~~d~v~d~----- 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGA----NRILSRDEFAESRPLEKQLWAGAIDT----- 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTC----SEEEEGGGSSCCCSSCCCCEEEEEES-----
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC----CEEEecCCHHHHHhhcCCCccEEEEC-----
Confidence 5999997 368888888876 55 99999999988888876421 122211 1111111334579998853
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
. .. ..++.+.++|+++|.+++...
T Consensus 219 ~-------g~--~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 219 V-------GD--KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp S-------CH--HHHHHHHHTEEEEEEEEECCC
T ss_pred C-------Cc--HHHHHHHHHHhcCCEEEEEec
Confidence 1 11 268888899999999887653
No 389
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=90.56 E-value=1.3 Score=37.13 Aligned_cols=89 Identities=21% Similarity=0.338 Sum_probs=56.9
Q ss_pred CCcEEEEccc-CcHhHHHHHHc-CCCcEEEEeCCH---HHHHHHHHhhcCCCCCeEEEccccC-CCC-C--CCCCeeEEE
Q 025475 50 SSRVLMVGCG-NALMSEDMVKD-GYEDIVNIDISS---VAIDMMKMKYEEIPQLKYLQMDVRD-MSF-F--EDESFDAVI 120 (252)
Q Consensus 50 ~~~vLD~G~G-~G~~~~~l~~~-~~~~v~~vD~s~---~~i~~a~~~~~~~~~v~~~~~d~~~-~~~-~--~~~~~D~v~ 120 (252)
+.+||-+|+| .|..+..++.. |. +|+++|.++ +-.+.+++.- ...+ | .+ +.. . ..+.+|+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~g-----a~~v--~-~~~~~~~~~~~~~~~d~vi 251 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETK-----TNYY--N-SSNGYDKLKDSVGKFDVII 251 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHT-----CEEE--E-CTTCSHHHHHHHCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhC-----Ccee--c-hHHHHHHHHHhCCCCCEEE
Confidence 8899999985 36666666554 66 999999987 6667776541 2222 3 22 110 0 014699998
Q ss_pred eccchhhhcCCCCChhhHHHHH-HHHHHcccCCcEEEEEEc
Q 025475 121 DKGTLDSLMCGTNAPISASQML-GEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~~~l-~~~~~~L~~gG~l~i~~~ 160 (252)
..-... ..+ +.+.++|+++|.+++...
T Consensus 252 d~~g~~-------------~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 252 DATGAD-------------VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp ECCCCC-------------THHHHHHGGGEEEEEEEEECSC
T ss_pred ECCCCh-------------HHHHHHHHHHHhcCCEEEEEec
Confidence 643211 135 778899999999887653
No 390
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=90.44 E-value=0.4 Score=39.93 Aligned_cols=93 Identities=16% Similarity=0.228 Sum_probs=61.2
Q ss_pred CCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----C-CCCCCeeE
Q 025475 47 IPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----F-FEDESFDA 118 (252)
Q Consensus 47 ~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~-~~~~~~D~ 118 (252)
+.++.+||-.|+ |.|..+..+++. |. ++++++.+++-.+.+++.-. ..++..+ .+.. . .....+|+
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga----~~v~~~~-~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGA----DIVLPLE-EGWAKAVREATGGAGVDM 230 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTC----SEEEESS-TTHHHHHHHHTTTSCEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC----cEEecCc-hhHHHHHHHHhCCCCceE
Confidence 567889999997 357787777776 55 99999999888887776421 1222222 1111 0 12236999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+..-.- ..+..+.+.|+++|.+++..
T Consensus 231 vid~~g~--------------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 231 VVDPIGG--------------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEESCC----------------CHHHHHHTEEEEEEEEEC-
T ss_pred EEECCch--------------hHHHHHHHhhcCCCEEEEEE
Confidence 9964221 14667888999999988765
No 391
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=90.30 E-value=1 Score=35.75 Aligned_cols=75 Identities=15% Similarity=0.161 Sum_probs=53.0
Q ss_pred CCCcEEEEcc----cCcH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCC---------C
Q 025475 49 TSSRVLMVGC----GNAL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFF---------E 112 (252)
Q Consensus 49 ~~~~vLD~G~----G~G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~---------~ 112 (252)
.++++|--|+ |.|. .+..|++.|. +|+.++.++...+.+.+.+.. ..++.++++|+.+.... .
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD 83 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3668888885 3443 6677778886 899999998877777666643 23688899999875311 1
Q ss_pred CCCeeEEEeccc
Q 025475 113 DESFDAVIDKGT 124 (252)
Q Consensus 113 ~~~~D~v~~~~~ 124 (252)
-+..|+++.+..
T Consensus 84 ~G~iD~lvnnAg 95 (256)
T 4fs3_A 84 VGNIDGVYHSIA 95 (256)
T ss_dssp HCCCSEEEECCC
T ss_pred hCCCCEEEeccc
Confidence 257899987754
No 392
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=90.28 E-value=1 Score=35.75 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=48.8
Q ss_pred CCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC---CCCCeEEEccccCCCCCC---------CC
Q 025475 50 SSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSFFE---------DE 114 (252)
Q Consensus 50 ~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~---~~~v~~~~~d~~~~~~~~---------~~ 114 (252)
+.++|-.|++.| .++..+++.|. +|++++.++...+.....+.. ..++.++.+|+.+..... .+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 457888887655 25556666676 899999998766555444432 125778889988753110 13
Q ss_pred CeeEEEeccc
Q 025475 115 SFDAVIDKGT 124 (252)
Q Consensus 115 ~~D~v~~~~~ 124 (252)
..|+++.+..
T Consensus 86 ~id~lv~~Ag 95 (267)
T 2gdz_A 86 RLDILVNNAG 95 (267)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 5899998754
No 393
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.08 E-value=1.5 Score=36.05 Aligned_cols=94 Identities=12% Similarity=0.092 Sum_probs=61.0
Q ss_pred hCCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC------C-CCCCC
Q 025475 46 YIPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------F-FEDES 115 (252)
Q Consensus 46 ~~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~------~-~~~~~ 115 (252)
.+.++.+||-.|+ |.|..+..++.. |. +++++|.+++.++.+++.-. -..+ |..+.. . .....
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~----~~~~--d~~~~~~~~~i~~~~~~~~ 214 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGC----HHTI--NYSTQDFAEVVREITGGKG 214 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTC----SEEE--ETTTSCHHHHHHHHHTTCC
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC----CEEE--ECCCHHHHHHHHHHhCCCC
Confidence 3567789999995 567777766665 55 89999999988887765311 1122 322211 0 11236
Q ss_pred eeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 116 FDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 116 ~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+|+|+.+-.- ..++.+.++|+++|.+++...
T Consensus 215 ~d~vi~~~g~--------------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 215 VDVVYDSIGK--------------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EEEEEECSCT--------------TTHHHHHHTEEEEEEEEECCC
T ss_pred CeEEEECCcH--------------HHHHHHHHhhccCCEEEEEec
Confidence 9999864221 346778889999999877653
No 394
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=90.07 E-value=1 Score=35.75 Aligned_cols=110 Identities=8% Similarity=0.070 Sum_probs=65.0
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEE-eCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNI-DISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDE 114 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~v-D~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~ 114 (252)
.++++|-.|++.|. ++..+++.|. +|+.+ +.++...+.....+.. ..++.++.+|+.+.... .-+
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 35688888987653 5666677776 77777 6666655555544433 34788999999875311 114
Q ss_pred CeeEEEeccchh-hh-cCCCCChhhHH-----------HHHHHHHHcccCCcEEEEEE
Q 025475 115 SFDAVIDKGTLD-SL-MCGTNAPISAS-----------QMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 115 ~~D~v~~~~~l~-~~-~~~~~~~~~~~-----------~~l~~~~~~L~~gG~l~i~~ 159 (252)
..|+++.+.... .. .....+.++.. .+++.+...++++|.++...
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 789999875432 11 11112333322 33445566666677776654
No 395
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.04 E-value=0.44 Score=39.92 Aligned_cols=96 Identities=24% Similarity=0.249 Sum_probs=58.5
Q ss_pred CC-CCCcEEEEccc-CcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEc-cccCCCCCCCCCeeEEEec
Q 025475 47 IP-TSSRVLMVGCG-NALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM-DVRDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~-~~~~vLD~G~G-~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~-d~~~~~~~~~~~~D~v~~~ 122 (252)
+. ++.+||-+|+| .|..+..+++. |. +|+++|.+++-++.+++.+. .-.++.. +........ +.+|+|+..
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lG---a~~vi~~~~~~~~~~~~-~g~D~vid~ 251 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLG---ADDYVIGSDQAKMSELA-DSLDYVIDT 251 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSC---CSCEEETTCHHHHHHST-TTEEEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcC---CceeeccccHHHHHHhc-CCCCEEEEC
Confidence 55 78899999986 37777777665 65 89999999887777763331 1122211 100011011 369999864
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
-.-. ..++.+.++|+++|.++....
T Consensus 252 ~g~~-------------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 252 VPVH-------------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp CCSC-------------CCSHHHHTTEEEEEEEEECSC
T ss_pred CCCh-------------HHHHHHHHHhccCCEEEEeCC
Confidence 2211 124556688999999887543
No 396
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=90.00 E-value=1.3 Score=36.78 Aligned_cols=91 Identities=18% Similarity=0.246 Sum_probs=59.4
Q ss_pred CCCcEEEE-ccc-CcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCC----CCCCCCCeeEEEe
Q 025475 49 TSSRVLMV-GCG-NALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM----SFFEDESFDAVID 121 (252)
Q Consensus 49 ~~~~vLD~-G~G-~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~----~~~~~~~~D~v~~ 121 (252)
++.+||-. |+| .|..+..+++. |. +|++++.+++-++.+++.-.. .++..+ .+. .......+|+|+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~----~vi~~~-~~~~~~~~~~~~~g~Dvv~d 223 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGAD----IVLNHK-ESLLNQFKTQGIELVDYVFC 223 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCS----EEECTT-SCHHHHHHHHTCCCEEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCc----EEEECC-ccHHHHHHHhCCCCccEEEE
Confidence 67799999 454 57777777776 55 999999999988888874221 222111 011 0012346999995
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEE
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 158 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~ 158 (252)
.. .-...+..+.++|+++|.++..
T Consensus 224 ~~-------------g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 224 TF-------------NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp SS-------------CHHHHHHHHHHHEEEEEEEEES
T ss_pred CC-------------CchHHHHHHHHHhccCCEEEEE
Confidence 32 2234567788899999998754
No 397
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=89.98 E-value=1.3 Score=41.31 Aligned_cols=52 Identities=19% Similarity=0.155 Sum_probs=40.6
Q ss_pred CcEEEEcccCcHhHHHHHHcC------CCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccc
Q 025475 51 SRVLMVGCGNALMSEDMVKDG------YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV 105 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~~------~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~ 105 (252)
.+|+|+-||.|.++.-+.+.| +..+.++|+++.+++.-+.++. +..+.+.|+
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp---~~~~~~~di 270 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP---QTEVRNEKA 270 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT---TSEEEESCH
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC---CCceecCcH
Confidence 489999999999999887765 4468899999999999888863 334444443
No 398
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.97 E-value=0.16 Score=40.66 Aligned_cols=62 Identities=15% Similarity=0.124 Sum_probs=40.4
Q ss_pred CeEEEccccCC-CCCCCCCeeEEEeccchhhhcCCCC---Ch----hhHHHHHHHHHHcccCCcEEEEEE
Q 025475 98 LKYLQMDVRDM-SFFEDESFDAVIDKGTLDSLMCGTN---AP----ISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 98 v~~~~~d~~~~-~~~~~~~~D~v~~~~~l~~~~~~~~---~~----~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.+++++|..+. ..++++++|+|++..++..-...-. +. ......+++++++|++||.+++..
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 46778887543 1245678999999987642100000 00 245677888999999999998864
No 399
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=89.93 E-value=0.35 Score=40.22 Aligned_cols=94 Identities=16% Similarity=0.249 Sum_probs=58.9
Q ss_pred CCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----CCCCCCeeEEEec
Q 025475 49 TSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FFEDESFDAVIDK 122 (252)
Q Consensus 49 ~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~~~~~~~D~v~~~ 122 (252)
++.+||-+|+|. |..+..+++. |..+|+++|.+++-++.+++. .. .++..+-.++. ......+|+|+..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~----~v~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD----RLVNPLEEDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS----EEECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH----hccCcCccCHHHHHHHhcCCCCCEEEEC
Confidence 778999999863 7777777765 544899999998877666543 21 12211101110 0012369999854
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
-. -...++.+.++|+++|.+++...
T Consensus 239 ~g-------------~~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 239 SG-------------NEAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp SC-------------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CC-------------CHHHHHHHHHHHhcCCEEEEEec
Confidence 21 12356778889999999887543
No 400
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=89.30 E-value=1.4 Score=34.83 Aligned_cols=110 Identities=15% Similarity=0.206 Sum_probs=63.6
Q ss_pred CCCcEEEEcccCc---HhHHHHHH-cCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCCC---------CC
Q 025475 49 TSSRVLMVGCGNA---LMSEDMVK-DGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFFE---------DE 114 (252)
Q Consensus 49 ~~~~vLD~G~G~G---~~~~~l~~-~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~~---------~~ 114 (252)
.+.+||-.|++.| .++..|++ .|. +|++++.++...+.....+.. ..++.++.+|+.+..... .+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 3557887776544 24555566 666 899999998766655544432 246889999998753110 13
Q ss_pred CeeEEEeccchhhhcCCCCC-hhhH-----------HHHHHHHHHcccCCcEEEEEE
Q 025475 115 SFDAVIDKGTLDSLMCGTNA-PISA-----------SQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~~~-~~~~-----------~~~l~~~~~~L~~gG~l~i~~ 159 (252)
..|+|+.+............ .++. ..+++.+.+.++++|.++.+.
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 68999876543221000011 1222 234455566666677766654
No 401
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=89.23 E-value=1.1 Score=44.29 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=56.6
Q ss_pred CCcEEEEcccCcHhHHHHHHcCC-CcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCC------------C--CCC-C
Q 025475 50 SSRVLMVGCGNALMSEDMVKDGY-EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM------------S--FFE-D 113 (252)
Q Consensus 50 ~~~vLD~G~G~G~~~~~l~~~~~-~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~------------~--~~~-~ 113 (252)
..+++|+-||.|.++.-+...|. ..+.++|+++.+++..+.++. ...++..|+.++ . .++ .
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p---~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~~ 927 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP---GTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQK 927 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT---TSEEECSCHHHHHHHHTTTCSBCSSCCBCCCT
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---CCcEeeccHHHHhHhhhccchhhhhhhhcccc
Confidence 34899999999999999999885 468899999999998888863 445555554321 0 011 2
Q ss_pred CCeeEEEeccchhhh
Q 025475 114 ESFDAVIDKGTLDSL 128 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~ 128 (252)
+.+|+|+.......+
T Consensus 928 ~~vDvl~GGpPCQ~F 942 (1330)
T 3av4_A 928 GDVEMLCGGPPCQGF 942 (1330)
T ss_dssp TTCSEEEECCCCTTT
T ss_pred CccceEEecCCCccc
Confidence 468999998877754
No 402
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.19 E-value=0.89 Score=38.16 Aligned_cols=94 Identities=21% Similarity=0.260 Sum_probs=57.9
Q ss_pred CC-CCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccC---CCCCCCCCeeEEE
Q 025475 47 IP-TSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD---MSFFEDESFDAVI 120 (252)
Q Consensus 47 ~~-~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~---~~~~~~~~~D~v~ 120 (252)
+. ++.+||-+|+|. |..+..+++. |. +|++++.+++-++.+++.+. ...++ |..+ ..... +.+|+|+
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lG---a~~v~--~~~~~~~~~~~~-~~~D~vi 256 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFG---ADSFL--VSRDQEQMQAAA-GTLDGII 256 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSC---CSEEE--ETTCHHHHHHTT-TCEEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcC---CceEE--eccCHHHHHHhh-CCCCEEE
Confidence 45 778999999863 6777777665 55 89999999887777664431 11222 1111 11011 3699999
Q ss_pred eccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 121 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
..-... . .++.+.++|+++|.++....
T Consensus 257 d~~g~~---------~----~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 257 DTVSAV---------H----PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ECCSSC---------C----CSHHHHHHEEEEEEEEECCC
T ss_pred ECCCcH---------H----HHHHHHHHHhcCCEEEEEcc
Confidence 643211 1 23456678899999877543
No 403
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.05 E-value=2 Score=34.72 Aligned_cols=110 Identities=15% Similarity=0.110 Sum_probs=65.1
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHH-HHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSV-AIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDE 114 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~-~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~ 114 (252)
.++++|-.|++.|. ++..+++.|. +|+.++.+.. ..+...+.... ..++.++.+|+.+.... ..+
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35688989987653 5666677776 8999998754 33434333332 24788899999875311 114
Q ss_pred CeeEEEeccchhhh--cCCCCChhhH-----------HHHHHHHHHcccCCcEEEEEE
Q 025475 115 SFDAVIDKGTLDSL--MCGTNAPISA-----------SQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 115 ~~D~v~~~~~l~~~--~~~~~~~~~~-----------~~~l~~~~~~L~~gG~l~i~~ 159 (252)
..|+++.+...... .....+.++. ..+++.+.+.|+++|.++.+.
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 68999977442211 0000122333 234456667777888877654
No 404
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=88.87 E-value=2.7 Score=33.08 Aligned_cols=73 Identities=19% Similarity=0.310 Sum_probs=51.3
Q ss_pred CCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---------CCCCee
Q 025475 50 SSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDESFD 117 (252)
Q Consensus 50 ~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~~~D 117 (252)
++++|-.|++.| .++..+++.|. +|+++|.+++..+.....+. .++.++.+|+.+.... ..+..|
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 84 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIG--PAAYAVQMDVTRQDSIDAAIAATVEHAGGLD 84 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC--CCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 557888888665 35666777776 89999999887766655542 3578889999875311 124789
Q ss_pred EEEeccch
Q 025475 118 AVIDKGTL 125 (252)
Q Consensus 118 ~v~~~~~l 125 (252)
+++.+...
T Consensus 85 ~lv~~Ag~ 92 (259)
T 4e6p_A 85 ILVNNAAL 92 (259)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99987654
No 405
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=88.76 E-value=2.6 Score=33.80 Aligned_cols=76 Identities=13% Similarity=0.311 Sum_probs=50.8
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeC-CHHHHHHHHHhhcC-CCCCeEEEccccCCCCCC---------CC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDI-SSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFFE---------DE 114 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~-s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~~---------~~ 114 (252)
.+.++|-.|++.|. ++..+++.|. +|+.++. +++..+.....+.. ..++.++.+|+.+..... -+
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35578888887653 5666677776 8999996 66655555444432 347889999998864211 14
Q ss_pred CeeEEEeccch
Q 025475 115 SFDAVIDKGTL 125 (252)
Q Consensus 115 ~~D~v~~~~~l 125 (252)
..|+++.+...
T Consensus 107 ~iD~lvnnAg~ 117 (280)
T 4da9_A 107 RIDCLVNNAGI 117 (280)
T ss_dssp CCCEEEEECC-
T ss_pred CCCEEEECCCc
Confidence 68999987654
No 406
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.72 E-value=6 Score=34.39 Aligned_cols=92 Identities=18% Similarity=0.321 Sum_probs=57.6
Q ss_pred CcEEEEcccC-c-HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc-------------C--C-C-CCeEEEccccCCCCC
Q 025475 51 SRVLMVGCGN-A-LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE-------------E--I-P-QLKYLQMDVRDMSFF 111 (252)
Q Consensus 51 ~~vLD~G~G~-G-~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~-------------~--~-~-~v~~~~~d~~~~~~~ 111 (252)
.+|.-+|+|. | .++..++..|. +|+++|.+++.++.++.... . . . ...+ ..|... .
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~---~ 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE---L 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG---G
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH---H
Confidence 3799999996 4 45666666676 89999999988877765321 0 0 0 1122 233311 1
Q ss_pred CCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEE
Q 025475 112 EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYML 157 (252)
Q Consensus 112 ~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i 157 (252)
...|+|+..-. + +..-...++.++...++++.+++.
T Consensus 113 --~~aDlVIeaVp-e-------~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 --STVDLVVEAVF-E-------DMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp --TTCSEEEECCC-S-------CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --CCCCEEEEcCC-C-------CHHHHHHHHHHHHhhCCCCeEEEe
Confidence 35899986432 1 224457788888888888776654
No 407
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.71 E-value=3.2 Score=28.80 Aligned_cols=68 Identities=19% Similarity=0.245 Sum_probs=41.7
Q ss_pred CCcEEEEcccC-cH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC---CCCCCeeEEEec
Q 025475 50 SSRVLMVGCGN-AL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF---FEDESFDAVIDK 122 (252)
Q Consensus 50 ~~~vLD~G~G~-G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~---~~~~~~D~v~~~ 122 (252)
+++|+-+|+|. |. ++..+.+.|. +++++|.+++.++..+... .+.++.+|..+... ..-..+|+|+..
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~----~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI----DALVINGDCTKIKTLEDAGIEDADMYIAV 76 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhc----CcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence 45788888863 33 3344445565 8999999998776665432 34566676654310 112468998865
No 408
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=88.65 E-value=0.48 Score=38.61 Aligned_cols=92 Identities=12% Similarity=0.082 Sum_probs=58.9
Q ss_pred CCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccc-cCCCCCCCCCeeEEEec
Q 025475 47 IPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV-RDMSFFEDESFDAVIDK 122 (252)
Q Consensus 47 ~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~-~~~~~~~~~~~D~v~~~ 122 (252)
+.++.+||-.|+ |.|..+..+++. |. ++++++.+++..+.+++.- .-.++..+- .+..... ..+|+|+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g----a~~~~~~~~~~~~~~~~-~~~d~vid- 195 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALG----AEEAATYAEVPERAKAW-GGLDLVLE- 195 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTT----CSEEEEGGGHHHHHHHT-TSEEEEEE-
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcC----CCEEEECCcchhHHHHh-cCceEEEE-
Confidence 677889999997 357777777765 55 8999999988777776531 112222111 1111001 46999985
Q ss_pred cchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 123 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
-.- ..++.+.++|+++|.++...
T Consensus 196 ~g~--------------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 196 VRG--------------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp CSC--------------TTHHHHHTTEEEEEEEEEC-
T ss_pred CCH--------------HHHHHHHHhhccCCEEEEEe
Confidence 321 24677788999999987654
No 409
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=88.52 E-value=3.4 Score=34.82 Aligned_cols=96 Identities=13% Similarity=0.035 Sum_probs=62.9
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC----CCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP----QLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~----~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
.+.+||.++.+.|.++..++.. .++.+.=|--.....+.+++... .+++. +..+ .....+|+|+...
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~--~~~~---~~~~~~~~v~~~l- 108 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFL--DSTA---DYPQQPGVVLIKV- 108 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEE--ETTS---CCCSSCSEEEEEC-
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEec--cccc---ccccCCCEEEEEc-
Confidence 4568999999999999988754 34555435544445555553321 24432 2222 2335799999543
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+++.......+..+...|++|+.+++..-
T Consensus 109 -------pk~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 109 -------PKTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp -------CSCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred -------CCCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 34457778889999999999999987664
No 410
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=88.45 E-value=1.9 Score=35.82 Aligned_cols=95 Identities=9% Similarity=0.055 Sum_probs=61.3
Q ss_pred hCCCC--CcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC------CCCCC
Q 025475 46 YIPTS--SRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------FFEDE 114 (252)
Q Consensus 46 ~~~~~--~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~------~~~~~ 114 (252)
.+.++ .+||-.|+ |.|..+..++.. |..+|++++.+++-++.+++.+. .... .|..+.. ....+
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g---~~~~--~d~~~~~~~~~~~~~~~~ 229 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELG---FDAA--INYKKDNVAEQLRESCPA 229 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC---CSEE--EETTTSCHHHHHHHHCTT
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---CceE--EecCchHHHHHHHHhcCC
Confidence 35677 89999997 356666666664 55489999999887777765331 1112 2322211 01122
Q ss_pred CeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 115 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 115 ~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.+|+|+.+-. ...++.+.++|+++|.+++..
T Consensus 230 ~~d~vi~~~G--------------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 230 GVDVYFDNVG--------------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp CEEEEEESCC--------------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCCEEEECCC--------------HHHHHHHHHHhccCcEEEEEC
Confidence 6999986422 145778889999999988754
No 411
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=88.44 E-value=0.82 Score=39.14 Aligned_cols=44 Identities=9% Similarity=-0.165 Sum_probs=37.4
Q ss_pred CcEEEEcccCcHhHHHHHHcC--CCc----EEEEeCCHHHHHHHHHhhcC
Q 025475 51 SRVLMVGCGNALMSEDMVKDG--YED----IVNIDISSVAIDMMKMKYEE 94 (252)
Q Consensus 51 ~~vLD~G~G~G~~~~~l~~~~--~~~----v~~vD~s~~~i~~a~~~~~~ 94 (252)
.+|+|+.||.|.....+.+.| ... +.++|+++.+++.-+.++..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 489999999999999998876 333 78899999999998888754
No 412
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=88.42 E-value=2.5 Score=33.43 Aligned_cols=72 Identities=15% Similarity=0.191 Sum_probs=43.9
Q ss_pred CCcEEEEccc--Cc--H-hHHHHHHcCCCcEEEEeCCH---HHHHHHHHhhcCCCCCeEEEccccCCCC---------CC
Q 025475 50 SSRVLMVGCG--NA--L-MSEDMVKDGYEDIVNIDISS---VAIDMMKMKYEEIPQLKYLQMDVRDMSF---------FE 112 (252)
Q Consensus 50 ~~~vLD~G~G--~G--~-~~~~l~~~~~~~v~~vD~s~---~~i~~a~~~~~~~~~v~~~~~d~~~~~~---------~~ 112 (252)
++++|-.|++ .| . ++..+++.|. +|++++.++ ..++...... +...++.+|+.+... -.
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQL---GSDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhc---CCcEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578888875 33 2 4455566676 899999886 3333322221 334788899887431 11
Q ss_pred CCCeeEEEeccch
Q 025475 113 DESFDAVIDKGTL 125 (252)
Q Consensus 113 ~~~~D~v~~~~~l 125 (252)
.+..|+++.+...
T Consensus 85 ~g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 85 WPKFDGFVHSIGF 97 (265)
T ss_dssp CSSEEEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2478999987653
No 413
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=88.22 E-value=2.6 Score=36.43 Aligned_cols=96 Identities=13% Similarity=0.152 Sum_probs=62.0
Q ss_pred hCCCCCcEEEEcc-c-CcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCC---------------
Q 025475 46 YIPTSSRVLMVGC-G-NALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM--------------- 108 (252)
Q Consensus 46 ~~~~~~~vLD~G~-G-~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~--------------- 108 (252)
.+.++.+||-+|+ | .|..+..+++....++++++.++.-++.+++.-. ..++...-.+.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa----~~vi~~~~~d~~~~~~~~~~~~~~~~ 300 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGA----EAIIDRNAEGYRFWKDENTQDPKEWK 300 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC----CEEEETTTTTCCSEEETTEECHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC----cEEEecCcCcccccccccccchHHHH
Confidence 3567889999997 4 5788888877633389999999988888876422 12221111110
Q ss_pred ------CC-CCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 109 ------SF-FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 109 ------~~-~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.. .....+|+|+..-. . ..+..+.++|+++|.+++..
T Consensus 301 ~~~~~i~~~t~g~g~Dvvid~~G------------~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 301 RFGKRIRELTGGEDIDIVFEHPG------------R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHTSCCEEEEEECSC------------H--HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHhCCCCCcEEEEcCC------------c--hhHHHHHHHhhCCcEEEEEe
Confidence 00 12247999986321 1 45777888999999988754
No 414
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.19 E-value=12 Score=32.76 Aligned_cols=94 Identities=18% Similarity=0.207 Sum_probs=60.0
Q ss_pred CcEEEEcccC--cHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc-------CCC------------CCeEEEccccCCC
Q 025475 51 SRVLMVGCGN--ALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE-------EIP------------QLKYLQMDVRDMS 109 (252)
Q Consensus 51 ~~vLD~G~G~--G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~-------~~~------------~v~~~~~d~~~~~ 109 (252)
.+|.-+|+|. +.++..++..|. +|++.|.+++.++.+.+.+. ..+ +++. ..|...
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~-- 81 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGH-QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDIHA-- 81 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCGGG--
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCHHH--
Confidence 3688889985 456677777776 89999999999988776421 111 1121 222211
Q ss_pred CCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 110 FFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 110 ~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
-...|+|+..- ..+......+++++...++++..++..+
T Consensus 82 ---~~~aDlVIeAV--------pe~~~vk~~v~~~l~~~~~~~~Ilasnt 120 (483)
T 3mog_A 82 ---LAAADLVIEAA--------SERLEVKKALFAQLAEVCPPQTLLTTNT 120 (483)
T ss_dssp ---GGGCSEEEECC--------CCCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ---hcCCCEEEEcC--------CCcHHHHHHHHHHHHHhhccCcEEEecC
Confidence 13579998642 1222456788999999998887664433
No 415
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=88.01 E-value=0.81 Score=37.66 Aligned_cols=94 Identities=18% Similarity=0.299 Sum_probs=58.2
Q ss_pred CCCCC-cEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEc-cc-cC-CCCCCCCCeeEE
Q 025475 47 IPTSS-RVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM-DV-RD-MSFFEDESFDAV 119 (252)
Q Consensus 47 ~~~~~-~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~-d~-~~-~~~~~~~~~D~v 119 (252)
+.++. +||-.|+ |.|..+..+++. |. ++++++.+++-++.+++.-. -.++.. +. .+ ......+.+|+|
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa----~~~i~~~~~~~~~~~~~~~~~~d~v 220 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGA----KEVLAREDVMAERIRPLDKQRWAAA 220 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTC----SEEEECC---------CCSCCEEEE
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC----cEEEecCCcHHHHHHHhcCCcccEE
Confidence 55664 8999997 467888887776 55 89999999877777765321 112211 11 01 111223469999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+..-. . ..+..+.++|+++|.+++..
T Consensus 221 id~~g------------~--~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 221 VDPVG------------G--RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EECST------------T--TTHHHHHHTEEEEEEEEECS
T ss_pred EECCc------------H--HHHHHHHHhhccCCEEEEEe
Confidence 85421 1 13667788999999988754
No 416
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=87.95 E-value=1.4 Score=36.64 Aligned_cols=95 Identities=13% Similarity=0.151 Sum_probs=60.8
Q ss_pred CCCCCcEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----CCCCCCeeEE
Q 025475 47 IPTSSRVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FFEDESFDAV 119 (252)
Q Consensus 47 ~~~~~~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~~~~~~~D~v 119 (252)
+.++.+||-.|+ |.|..+..+++. |. +|+++|.+++-++.+++.-. -.++..+-.+.. ......+|+|
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa----~~~~~~~~~~~~~~~~~~~~~g~Dvv 239 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGA----KRGINYRSEDFAAVIKAETGQGVDII 239 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTC----SEEEETTTSCHHHHHHHHHSSCEEEE
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC----CEEEeCCchHHHHHHHHHhCCCceEE
Confidence 567889999953 357777777766 55 89999999998888876421 122221111110 0113469999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+..-.- ..+..+.+.|+++|.+++...
T Consensus 240 id~~g~--------------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 240 LDMIGA--------------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EESCCG--------------GGHHHHHHTEEEEEEEEECCC
T ss_pred EECCCH--------------HHHHHHHHHhccCCEEEEEEe
Confidence 964321 146667889999999887653
No 417
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=87.88 E-value=2.1 Score=35.09 Aligned_cols=93 Identities=17% Similarity=0.170 Sum_probs=57.9
Q ss_pred hCCCCCcEEEEc-cc-CcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccC-CCCCCCCCeeEEEe
Q 025475 46 YIPTSSRVLMVG-CG-NALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD-MSFFEDESFDAVID 121 (252)
Q Consensus 46 ~~~~~~~vLD~G-~G-~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~-~~~~~~~~~D~v~~ 121 (252)
.+.++.+||-.| +| .|..+..+++. |. ++++++ ++.-.+.+++.-. -.++..+-.+ .. ..-..+|+|+.
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lGa----~~~i~~~~~~~~~-~~~~g~D~v~d 221 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALGA----EQCINYHEEDFLL-AISTPVDAVID 221 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHTC----SEEEETTTSCHHH-HCCSCEEEEEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcCC----CEEEeCCCcchhh-hhccCCCEEEE
Confidence 467888999997 55 58888888876 55 888887 4554666665421 1222221111 11 11146999985
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.-. -. .+..+.++|+++|.++...
T Consensus 222 ~~g-------------~~-~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 222 LVG-------------GD-VGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp SSC-------------HH-HHHHHGGGEEEEEEEEECC
T ss_pred CCC-------------cH-HHHHHHHhccCCCEEEEeC
Confidence 321 11 2367889999999988764
No 418
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=87.82 E-value=2.1 Score=34.01 Aligned_cols=109 Identities=15% Similarity=0.151 Sum_probs=64.7
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeC-CHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCC
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDI-SSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~-s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
++++|-.|++.|. ++..+++.|. +|+.++. +....+...+.+.. ..++.++.+|+.+.... ..+.
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5578888887653 5666677776 7888775 45545544444432 34688999999875311 1146
Q ss_pred eeEEEeccchhhh-cCCCCChhhH-----------HHHHHHHHHcccCCcEEEEEE
Q 025475 116 FDAVIDKGTLDSL-MCGTNAPISA-----------SQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 116 ~D~v~~~~~l~~~-~~~~~~~~~~-----------~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.|+++.+...... .....+.++. ..+++.+.+.|+++|.++.+.
T Consensus 97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 8999977554321 0001122333 234456677777788877654
No 419
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=87.81 E-value=0.97 Score=36.09 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=55.0
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCC---------CCCCC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSF---------FEDES 115 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~---------~~~~~ 115 (252)
.++++|--|++.|. .+..+++.|. +|+.+|.+++.++...+.+.. ..++..+++|+.+... -.-++
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 46678888887763 6667777776 899999999887766665533 3477888899887431 12367
Q ss_pred eeEEEeccchh
Q 025475 116 FDAVIDKGTLD 126 (252)
Q Consensus 116 ~D~v~~~~~l~ 126 (252)
.|+++.+....
T Consensus 87 iDiLVNNAG~~ 97 (255)
T 4g81_D 87 VDILINNAGIQ 97 (255)
T ss_dssp CCEEEECCCCC
T ss_pred CcEEEECCCCC
Confidence 89999876543
No 420
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.63 E-value=1.9 Score=34.38 Aligned_cols=75 Identities=9% Similarity=0.197 Sum_probs=55.6
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
+++++|--|++.|. .+..+++.|. +|+.+|.+++.++...+.+.. ..++..+++|+.+.... .-++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 84 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR 84 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46688888987764 6666777776 899999999888777776643 34788899999875421 1257
Q ss_pred eeEEEeccc
Q 025475 116 FDAVIDKGT 124 (252)
Q Consensus 116 ~D~v~~~~~ 124 (252)
.|+++.+..
T Consensus 85 iDiLVNNAG 93 (254)
T 4fn4_A 85 IDVLCNNAG 93 (254)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 899998764
No 421
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.39 E-value=2.7 Score=31.76 Aligned_cols=67 Identities=16% Similarity=0.274 Sum_probs=43.2
Q ss_pred cEEEEccc--CcH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccch
Q 025475 52 RVLMVGCG--NAL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 125 (252)
Q Consensus 52 ~vLD~G~G--~G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l 125 (252)
+||-.|+. .|. ++..|++.|. +|++++.++....... ++++++.+|+.+.....-..+|+|+.....
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH------KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC------SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc------CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 57878853 233 4444555675 8999999876544322 468999999987642111357999876543
No 422
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=87.26 E-value=1.7 Score=35.18 Aligned_cols=109 Identities=16% Similarity=0.112 Sum_probs=64.3
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCC--HHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCC
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDIS--SVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDE 114 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s--~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~ 114 (252)
++++|-.|++.|. ++..+++.|. +|+.++.+ ....+........ ..++.++.+|+.+.... ..+
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5688999987653 5666677776 89998886 3334444333322 24678888998875311 114
Q ss_pred CeeEEEeccchhhh--cCCCCChhhH-----------HHHHHHHHHcccCCcEEEEEE
Q 025475 115 SFDAVIDKGTLDSL--MCGTNAPISA-----------SQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 115 ~~D~v~~~~~l~~~--~~~~~~~~~~-----------~~~l~~~~~~L~~gG~l~i~~ 159 (252)
..|+++.+...... .....+.++. ..+++.+...++++|.++.+.
T Consensus 128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 68999987653221 0011122333 234456667777888877654
No 423
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.80 E-value=5.8 Score=30.29 Aligned_cols=66 Identities=18% Similarity=0.249 Sum_probs=43.1
Q ss_pred cEEEEcccC-cH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC---CCCCCeeEEEec
Q 025475 52 RVLMVGCGN-AL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF---FEDESFDAVIDK 122 (252)
Q Consensus 52 ~vLD~G~G~-G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~---~~~~~~D~v~~~ 122 (252)
+|+-+|+|. |. ++..+.+.|. +++++|.+++.++...... .+.++.+|..+... ..-..+|+|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL----KATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS----SSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc----CCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 577788753 32 3344444555 8999999999877655432 46788999877421 123468988864
No 424
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=86.68 E-value=6.9 Score=27.92 Aligned_cols=96 Identities=10% Similarity=0.094 Sum_probs=54.2
Q ss_pred CcEEEEcccC-cH-hHHHHHHcCCCcEEEEeCC-HHHHHHHHHhhcCCCCCeEEEccccCCCC---CCCCCeeEEEeccc
Q 025475 51 SRVLMVGCGN-AL-MSEDMVKDGYEDIVNIDIS-SVAIDMMKMKYEEIPQLKYLQMDVRDMSF---FEDESFDAVIDKGT 124 (252)
Q Consensus 51 ~~vLD~G~G~-G~-~~~~l~~~~~~~v~~vD~s-~~~i~~a~~~~~~~~~v~~~~~d~~~~~~---~~~~~~D~v~~~~~ 124 (252)
.+|+-+|+|. |. ++..|.+.|. +|+++|.+ ++..+....... ..+.++.+|..+... ..-..+|+|++...
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc--CCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence 4788888762 32 3333444455 89999997 454444443332 247888999876421 12346888886421
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+ ......+....+.+.+...+++..
T Consensus 81 ---------~-d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 81 ---------N-DADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp ---------C-HHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred ---------C-hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 1 222333444455556666666544
No 425
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.57 E-value=1.7 Score=35.72 Aligned_cols=95 Identities=19% Similarity=0.301 Sum_probs=60.1
Q ss_pred CCCCC-cEEEEcc--cCcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEc-cc-cC-CCCCCCCCeeEE
Q 025475 47 IPTSS-RVLMVGC--GNALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM-DV-RD-MSFFEDESFDAV 119 (252)
Q Consensus 47 ~~~~~-~vLD~G~--G~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~-d~-~~-~~~~~~~~~D~v 119 (252)
+.++. +||-.|+ |.|..+..+++. |. ++++++.+++-++.+++.-. -.++.. +. .+ ........+|+|
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa----~~v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGA----SEVISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTC----SEEEEHHHHCSSCCCSSCCCCEEEE
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC----cEEEECCCchHHHHHHhhcCCccEE
Confidence 55664 8999997 357777777765 65 79999998877777765321 122221 11 11 111223469999
Q ss_pred EeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 120 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
+..-. . ..+..+.++|+++|.+++...
T Consensus 222 id~~g------------~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 222 VDPVG------------G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EESCC------------T--HHHHHHHTTEEEEEEEEECCC
T ss_pred EECCc------------H--HHHHHHHHhhcCCCEEEEEec
Confidence 85321 1 257778899999999887643
No 426
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=86.46 E-value=6.3 Score=32.42 Aligned_cols=94 Identities=11% Similarity=0.089 Sum_probs=59.7
Q ss_pred CcEEEEcccC--cHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-------CC-------------CCeEEEccccCC
Q 025475 51 SRVLMVGCGN--ALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-------IP-------------QLKYLQMDVRDM 108 (252)
Q Consensus 51 ~~vLD~G~G~--G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-------~~-------------~v~~~~~d~~~~ 108 (252)
.+|--+|+|. +.++..++..|+ +|++.|.+++.++.+++.... .+ ++++ ..|..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHHHH
Confidence 4788899985 456777777777 899999999998887654210 01 1121 1222211
Q ss_pred CCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEE
Q 025475 109 SFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 158 (252)
Q Consensus 109 ~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~ 158 (252)
-...|+|+..-. .+.+....++.++...++++-.++-.
T Consensus 85 ----v~~aDlVieavp--------e~~~~k~~v~~~l~~~~~~~~Ii~s~ 122 (319)
T 2dpo_A 85 ----VEGVVHIQECVP--------ENLDLKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp ----TTTEEEEEECCC--------SCHHHHHHHHHHHHTTCCSSSEEEEC
T ss_pred ----HhcCCEEEEecc--------CCHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 135899986432 23345678889999999887765433
No 427
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=86.04 E-value=3.9 Score=32.55 Aligned_cols=110 Identities=12% Similarity=0.142 Sum_probs=64.9
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCC-HHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDIS-SVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDE 114 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s-~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~ 114 (252)
.++++|-.|++.|. ++..+++.|. +|+.++.. ....+.....+.. ..++.++.+|+.+.... ..+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 45689999987653 6666777776 78888654 4444444443322 34678899999875311 114
Q ss_pred CeeEEEeccchhhh-cCCCCChhhH-----------HHHHHHHHHcccCCcEEEEEE
Q 025475 115 SFDAVIDKGTLDSL-MCGTNAPISA-----------SQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 115 ~~D~v~~~~~l~~~-~~~~~~~~~~-----------~~~l~~~~~~L~~gG~l~i~~ 159 (252)
..|+++.+...... .....+.++. ..+++.+.+.|+++|.++.+.
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 68999987643221 0001122333 234556667777788777653
No 428
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=85.94 E-value=1.2 Score=35.55 Aligned_cols=77 Identities=12% Similarity=0.211 Sum_probs=52.5
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---------CCCCe
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDESF 116 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~~~ 116 (252)
.++++|--|++.|. .+..+++.|. +|+.+|.+++..+.+++..+..+++.++.+|+.+.... .-++.
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i 84 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL 84 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 46688888988764 5667777776 89999987654444443333345788999999875311 12578
Q ss_pred eEEEeccchh
Q 025475 117 DAVIDKGTLD 126 (252)
Q Consensus 117 D~v~~~~~l~ 126 (252)
|+++.+..+.
T Consensus 85 DiLVNnAGi~ 94 (258)
T 4gkb_A 85 DGLVNNAGVN 94 (258)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999887544
No 429
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=85.87 E-value=1.7 Score=34.63 Aligned_cols=110 Identities=17% Similarity=0.232 Sum_probs=63.8
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEE-eCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNI-DISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDE 114 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~v-D~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~ 114 (252)
.+.++|-.|++.|. .+..+++.|. +|+.+ ..++...+.....+.. ..++.++.+|+.+.... ..+
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46688988987663 6666777776 67766 4444444444444322 34688889999875311 114
Q ss_pred CeeEEEeccchhhh-cCCCCChhhHH-----------HHHHHHHHcccCCcEEEEEE
Q 025475 115 SFDAVIDKGTLDSL-MCGTNAPISAS-----------QMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 115 ~~D~v~~~~~l~~~-~~~~~~~~~~~-----------~~l~~~~~~L~~gG~l~i~~ 159 (252)
..|+++.+...... .+...+.++.. .+++.+...++++|.++.+.
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 78999987654321 01111223222 33455666777788877654
No 430
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=85.67 E-value=3.7 Score=35.30 Aligned_cols=96 Identities=15% Similarity=0.057 Sum_probs=60.9
Q ss_pred hCCCCCcEEEEcc-c-CcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCC---------------
Q 025475 46 YIPTSSRVLMVGC-G-NALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM--------------- 108 (252)
Q Consensus 46 ~~~~~~~vLD~G~-G-~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~--------------- 108 (252)
.+.++.+||-.|+ | .|..+..+++....++++++.+++-++.+++.-. -.++...-.+.
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa----~~~i~~~~~~~~~~~~~~~~~~~~~~ 292 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGC----DLVINRAELGITDDIADDPRRVVETG 292 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC----CCEEEHHHHTCCTTGGGCHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC----CEEEecccccccccccccccccchhh
Confidence 3567889999997 3 5777777777633389999999998888865421 12222111111
Q ss_pred -------CCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 109 -------SFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 109 -------~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.......+|+|+..-. . ..+....++|+++|.+++..
T Consensus 293 ~~~~~~v~~~~g~g~Dvvid~~G------------~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 293 RKLAKLVVEKAGREPDIVFEHTG------------R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHSSCCSEEEECSC------------H--HHHHHHHHHSCTTCEEEESC
T ss_pred hHHHHHHHHHhCCCceEEEECCC------------c--hHHHHHHHHHhcCCEEEEEe
Confidence 0001246999986422 1 24677788999999988754
No 431
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=85.62 E-value=4.3 Score=32.58 Aligned_cols=92 Identities=18% Similarity=0.321 Sum_probs=57.8
Q ss_pred CcEEEEcccC-c-HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--------C------------CCCeEEEccccCC
Q 025475 51 SRVLMVGCGN-A-LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--------I------------PQLKYLQMDVRDM 108 (252)
Q Consensus 51 ~~vLD~G~G~-G-~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--------~------------~~v~~~~~d~~~~ 108 (252)
.+|.-+|+|. | .++..++..|. +|+++|.+++.++.+.+.+.. . .++.. ..|..+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 3688889885 3 45556666676 899999999988877765311 0 01121 2222211
Q ss_pred CCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEE
Q 025475 109 SFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYM 156 (252)
Q Consensus 109 ~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 156 (252)
-...|+|+..-. .+.+....+++++...++++..++
T Consensus 83 ----~~~aDlVi~av~--------~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 ----VKDADLVIEAVP--------ESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp ----TTTCSEEEECCC--------SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred ----hccCCEEEEecc--------CcHHHHHHHHHHHHhhCCCCcEEE
Confidence 135899986422 233466788899999998877654
No 432
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=85.46 E-value=8.3 Score=30.96 Aligned_cols=93 Identities=13% Similarity=0.185 Sum_probs=56.0
Q ss_pred CcEEEEcccC-c-HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEE--------ccccCCCCCCC--CCeeE
Q 025475 51 SRVLMVGCGN-A-LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQ--------MDVRDMSFFED--ESFDA 118 (252)
Q Consensus 51 ~~vLD~G~G~-G-~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~--------~d~~~~~~~~~--~~~D~ 118 (252)
++|.-+|+|. | .++..+++.|. +|+.+|.+++.++..++.- +.... .+..+..+... ..+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNG-----LIADFNGEEVVANLPIFSPEEIDHQNEQVDL 77 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHC-----EEEEETTEEEEECCCEECGGGCCTTSCCCSE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCC-----EEEEeCCCeeEecceeecchhhcccCCCCCE
Confidence 4788999984 3 35555666666 8999999998777666541 11111 11111110111 26899
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+..-. ......+++.+...++++..++...
T Consensus 78 vi~~v~----------~~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 78 IIALTK----------AQQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp EEECSC----------HHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred EEEEec----------cccHHHHHHHHHHhcCCCCEEEEec
Confidence 986432 2455777888888888776655443
No 433
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.36 E-value=5.3 Score=32.33 Aligned_cols=95 Identities=19% Similarity=0.216 Sum_probs=57.3
Q ss_pred CCcEEEEcccC-c-HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 50 SSRVLMVGCGN-A-LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 50 ~~~vLD~G~G~-G-~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
.++|.-+|+|. | .++..+++.|. +|++.|.+++.++.+.+. + ......+..+. -...|+|+..-.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~----g-~~~~~~~~~e~----~~~aDvvi~~vp--- 73 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAE----G-ACGAAASAREF----AGVVDALVILVV--- 73 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----T-CSEEESSSTTT----TTTCSEEEECCS---
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHc----C-CccccCCHHHH----HhcCCEEEEECC---
Confidence 35788899884 3 45666667776 899999999887776653 1 12212233222 135799986432
Q ss_pred hcCCCCChhhHHHHH---HHHHHcccCCcEEEEEEcCCh
Q 025475 128 LMCGTNAPISASQML---GEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l---~~~~~~L~~gG~l~i~~~~~~ 163 (252)
++.....++ +.+...+++|..++-.....|
T Consensus 74 ------~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~ 106 (303)
T 3g0o_A 74 ------NAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISS 106 (303)
T ss_dssp ------SHHHHHHHHC--CCCGGGSCTTCEEEECSCCCH
T ss_pred ------CHHHHHHHHhChhhHHhhCCCCCEEEecCCCCH
Confidence 223445555 566677887776654443444
No 434
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=85.34 E-value=3.8 Score=37.57 Aligned_cols=108 Identities=15% Similarity=0.290 Sum_probs=69.5
Q ss_pred CCCcEEEEcccCcHhHHHHHHcCC-------CcEEEEeCC-HHHHHHHHHhhcCC-------------------------
Q 025475 49 TSSRVLMVGCGNALMSEDMVKDGY-------EDIVNIDIS-SVAIDMMKMKYEEI------------------------- 95 (252)
Q Consensus 49 ~~~~vLD~G~G~G~~~~~l~~~~~-------~~v~~vD~s-~~~i~~a~~~~~~~------------------------- 95 (252)
+...|+-+|||.=.....+..... ..+..+|++ |+.++.=++.+...
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 345899999998777777755411 234444444 44444444433210
Q ss_pred -CCCeEEEccccCCCC---------C-CCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 96 -PQLKYLQMDVRDMSF---------F-EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 96 -~~v~~~~~d~~~~~~---------~-~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
.+.+++.+|+++... + .....-++++-.++.++ +++...++++.+.+. ++|.+++.+...|
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl-----~~~~~~~ll~~~~~~--~~~~~~~~e~~~~ 258 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYM-----KPERSDSIIEATSKM--ENSHFIILEQLIP 258 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGS-----CHHHHHHHHHHHHTS--SSEEEEEEEECCT
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEc-----CHHHHHHHHHHHhhC--CCceEEEEEeecC
Confidence 256788899987421 1 23334567777889999 889999999998864 6777777665444
No 435
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=85.25 E-value=1.4 Score=35.08 Aligned_cols=75 Identities=11% Similarity=0.136 Sum_probs=50.8
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC----------CCCC
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF----------EDES 115 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~----------~~~~ 115 (252)
++++|-.|++.|. ++..+++.|. +|++++.++..++...+.+.. ..++.++.+|+.+.... ..+.
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 99 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 99 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5678888886552 5556666676 899999998776655444432 23678889998775311 0157
Q ss_pred eeEEEeccch
Q 025475 116 FDAVIDKGTL 125 (252)
Q Consensus 116 ~D~v~~~~~l 125 (252)
.|+++.+...
T Consensus 100 id~lv~nAg~ 109 (273)
T 1ae1_A 100 LNILVNNAGV 109 (273)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 8999987654
No 436
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=85.17 E-value=2.1 Score=35.92 Aligned_cols=93 Identities=16% Similarity=0.227 Sum_probs=57.6
Q ss_pred CCCCcEEEEccc--CcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCC----CCCCCCeeEEE
Q 025475 48 PTSSRVLMVGCG--NALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FFEDESFDAVI 120 (252)
Q Consensus 48 ~~~~~vLD~G~G--~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~----~~~~~~~D~v~ 120 (252)
.++.+||-.|++ .|..+..+++. |. +++++. ++.-.+.+++.- ...++...-.++. ....+.+|+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lG----a~~vi~~~~~~~~~~v~~~t~g~~d~v~ 236 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRG----AEEVFDYRAPNLAQTIRTYTKNNLRYAL 236 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTT----CSEEEETTSTTHHHHHHHHTTTCCCEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcC----CcEEEECCCchHHHHHHHHccCCccEEE
Confidence 567799999983 68888888876 55 788875 777777776542 2223322111110 01234599999
Q ss_pred eccchhhhcCCCCChhhHHHHHHHHHHcc-cCCcEEEEEE
Q 025475 121 DKGTLDSLMCGTNAPISASQMLGEVSRLL-KPGGIYMLIT 159 (252)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L-~~gG~l~i~~ 159 (252)
..-. -...++.+.+.| +++|.+++..
T Consensus 237 d~~g-------------~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 237 DCIT-------------NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp ESSC-------------SHHHHHHHHHHSCTTCEEEEESS
T ss_pred ECCC-------------chHHHHHHHHHhhcCCCEEEEEe
Confidence 5321 123466677788 6999987754
No 437
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=85.07 E-value=8.8 Score=30.42 Aligned_cols=85 Identities=13% Similarity=0.167 Sum_probs=52.6
Q ss_pred cEEEEcccC-c-HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhhhc
Q 025475 52 RVLMVGCGN-A-LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLM 129 (252)
Q Consensus 52 ~vLD~G~G~-G-~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~~ 129 (252)
+|.-+|+|. | .++..+.+.|. +|+++|.+++.++.+++. +....... +..+. ...|+|+..-
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~----g~~~~~~~---~~~~~--~~~D~vi~av------ 65 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVER----QLVDEAGQ---DLSLL--QTAKIIFLCT------ 65 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----TSCSEEES---CGGGG--TTCSEEEECS------
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhC----CCCccccC---CHHHh--CCCCEEEEEC------
Confidence 577889884 3 35555666666 899999999877766532 11111112 22212 4689998643
Q ss_pred CCCCChhhHHHHHHHHHHcccCCcEEE
Q 025475 130 CGTNAPISASQMLGEVSRLLKPGGIYM 156 (252)
Q Consensus 130 ~~~~~~~~~~~~l~~~~~~L~~gG~l~ 156 (252)
++.....+++++...++++..++
T Consensus 66 ----~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 66 ----PIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp ----CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred ----CHHHHHHHHHHHHhhCCCCCEEE
Confidence 23455677888888888776554
No 438
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=84.94 E-value=9.9 Score=29.21 Aligned_cols=71 Identities=14% Similarity=0.276 Sum_probs=46.6
Q ss_pred CCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC----C-CCCCeeEEEe
Q 025475 50 SSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----F-EDESFDAVID 121 (252)
Q Consensus 50 ~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~----~-~~~~~D~v~~ 121 (252)
++++|-.|++.| .++..+++.|. +|++++.++...+...... ..++++.+|+.+... + ..+..|+|+.
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 82 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKEC---PGIEPVCVDLGDWDATEKALGGIGPVDLLVN 82 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHS---TTCEEEECCTTCHHHHHHHHTTCCCCSEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc---cCCCcEEecCCCHHHHHHHHHHcCCCCEEEE
Confidence 457888887544 24555566676 8999999987665444332 356778888877431 1 1246899998
Q ss_pred ccc
Q 025475 122 KGT 124 (252)
Q Consensus 122 ~~~ 124 (252)
+..
T Consensus 83 ~Ag 85 (244)
T 1cyd_A 83 NAA 85 (244)
T ss_dssp CCC
T ss_pred CCc
Confidence 754
No 439
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=84.79 E-value=2.1 Score=35.47 Aligned_cols=91 Identities=14% Similarity=0.141 Sum_probs=59.4
Q ss_pred CCCCCcEEEEcc-c-CcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC-----CCCCCeeE
Q 025475 47 IPTSSRVLMVGC-G-NALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF-----FEDESFDA 118 (252)
Q Consensus 47 ~~~~~~vLD~G~-G-~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~-----~~~~~~D~ 118 (252)
+.++.+||-.|+ | .|..+..+++. |. +|+++ .+++-++.+++.-. ..+. +-.+... .....+|+
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa-----~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGA-----TPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTS-----EEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCC-----CEec-cCCCHHHHHHHHhcCCCceE
Confidence 567889999994 3 58888887776 55 89999 88888887766421 2222 1111110 12346999
Q ss_pred EEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 119 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 119 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
|+..-. ...+..+.+.|+++|.+++..
T Consensus 220 vid~~g--------------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 220 VYDTLG--------------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEESSC--------------THHHHHHHHHEEEEEEEEESC
T ss_pred EEECCC--------------cHHHHHHHHHHhcCCeEEEEc
Confidence 986321 135777788999999988754
No 440
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=84.71 E-value=2.7 Score=33.44 Aligned_cols=75 Identities=13% Similarity=0.233 Sum_probs=44.2
Q ss_pred CCcEEEEccc--Cc--H-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---------CCCC
Q 025475 50 SSRVLMVGCG--NA--L-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 50 ~~~vLD~G~G--~G--~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
++++|-.|++ .| . ++..+++.|. +|++++.++..-+..++.....+.+.++.+|+.+.... ..+.
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 84 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578888875 33 2 4444555565 89999988751112222111123478889998874311 1246
Q ss_pred eeEEEeccch
Q 025475 116 FDAVIDKGTL 125 (252)
Q Consensus 116 ~D~v~~~~~l 125 (252)
.|+++.+...
T Consensus 85 id~lv~nAg~ 94 (275)
T 2pd4_A 85 LDFIVHSVAF 94 (275)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 8999987653
No 441
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=84.39 E-value=1.8 Score=36.34 Aligned_cols=68 Identities=21% Similarity=0.215 Sum_probs=43.5
Q ss_pred CCCcEEEEccc-CcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCC--CCCeeEEEecc
Q 025475 49 TSSRVLMVGCG-NALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFE--DESFDAVIDKG 123 (252)
Q Consensus 49 ~~~~vLD~G~G-~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~--~~~~D~v~~~~ 123 (252)
+.++|+-+||| .|......+.. ..+++.+|.+...++.++. .+..+..|+.+...+. -...|+|+...
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~------~~~~~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE------FATPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT------TSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc------cCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence 45689999996 35544444433 3489999999987776643 3466777776643111 13579988754
No 442
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=84.35 E-value=3.2 Score=32.64 Aligned_cols=74 Identities=22% Similarity=0.358 Sum_probs=52.9
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCCeEEEccccCCCCC---------CCCCe
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFF---------EDESF 116 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~-~~v~~~~~d~~~~~~~---------~~~~~ 116 (252)
++++|-.|++.|. ++..+++.|. +|++++.+++.++.+...+... .++.++.+|+.+.... ..+..
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4578888876652 5666677776 8999999998888777766543 3788899999875311 11468
Q ss_pred eEEEeccc
Q 025475 117 DAVIDKGT 124 (252)
Q Consensus 117 D~v~~~~~ 124 (252)
|+++.+..
T Consensus 85 d~lv~nAg 92 (257)
T 3imf_A 85 DILINNAA 92 (257)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998754
No 443
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=84.28 E-value=16 Score=33.89 Aligned_cols=106 Identities=16% Similarity=0.228 Sum_probs=68.6
Q ss_pred CcEEEEcccC--cHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-------------CC-C--CeEEEccccCCCCCC
Q 025475 51 SRVLMVGCGN--ALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-------------IP-Q--LKYLQMDVRDMSFFE 112 (252)
Q Consensus 51 ~~vLD~G~G~--G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-------------~~-~--v~~~~~d~~~~~~~~ 112 (252)
.+|--+|+|+ +.++..++..|. .|+..|++++.++.++..... .. . .-....+..++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l---- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKEL---- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGG----
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHH----
Confidence 3899999996 345666667777 999999999998888765421 00 0 01111222222
Q ss_pred CCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhhhhhhc
Q 025475 113 DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHL 170 (252)
Q Consensus 113 ~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~ 170 (252)
...|+|+-. +.+.+ +-.+++++++-.+++|+.+|.-.+-+-+...+..-
T Consensus 392 -~~aDlVIEA-V~E~l-------~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~~ 440 (742)
T 3zwc_A 392 -STVDLVVEA-VFEDM-------NLKKKVFAELSALCKPGAFLCTNTSALNVDDIASS 440 (742)
T ss_dssp -GSCSEEEEC-CCSCH-------HHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTT
T ss_pred -hhCCEEEEe-ccccH-------HHHHHHHHHHhhcCCCCceEEecCCcCChHHHHhh
Confidence 247888854 33444 88899999999999998877655545554444433
No 444
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=84.28 E-value=5.8 Score=31.36 Aligned_cols=73 Identities=18% Similarity=0.356 Sum_probs=49.7
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCH--HHHHHHHHhhcCCCCCeEEEccccCCCC----CCCCCeeEE
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISS--VAIDMMKMKYEEIPQLKYLQMDVRDMSF----FEDESFDAV 119 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~--~~i~~a~~~~~~~~~v~~~~~d~~~~~~----~~~~~~D~v 119 (252)
.++++|--|++.|. .+..|++.|. +|+.+|.+. +..+..++ ...++..+++|+.+... +..+..|++
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~---~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAK---DGGNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHH---TTCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHH---hCCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 36678888887764 6677777776 899999874 33333222 23467889999987542 345779999
Q ss_pred Eeccch
Q 025475 120 IDKGTL 125 (252)
Q Consensus 120 ~~~~~l 125 (252)
+.+..+
T Consensus 84 VNNAGi 89 (247)
T 4hp8_A 84 VNNAGI 89 (247)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 987654
No 445
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.03 E-value=1.3 Score=38.57 Aligned_cols=68 Identities=15% Similarity=0.293 Sum_probs=46.9
Q ss_pred CCcEEEEcccC-cHhHHH-HHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC---CCCCCeeEEEec
Q 025475 50 SSRVLMVGCGN-ALMSED-MVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF---FEDESFDAVIDK 122 (252)
Q Consensus 50 ~~~vLD~G~G~-G~~~~~-l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~---~~~~~~D~v~~~ 122 (252)
.++|+-+|||. |..... |...|+ +|+.+|.+++.++.+...+ .+..+++|..+..- ..-..+|++++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~-~v~vId~d~~~~~~~~~~~----~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENN-DITIVDKDGDRLRELQDKY----DLRVVNGHASHPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTE-EEEEEESCHHHHHHHHHHS----SCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHhc----CcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence 45788888873 443332 223344 8999999999998887765 46889999987531 223568988863
No 446
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=83.78 E-value=9 Score=33.13 Aligned_cols=103 Identities=11% Similarity=0.084 Sum_probs=58.2
Q ss_pred CcEEEEcccC-c-HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC---------------CCCCeEEEccccCCCCCCC
Q 025475 51 SRVLMVGCGN-A-LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE---------------IPQLKYLQMDVRDMSFFED 113 (252)
Q Consensus 51 ~~vLD~G~G~-G-~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~---------------~~~v~~~~~d~~~~~~~~~ 113 (252)
++|.-+|+|. | .++..+++.|. +|+++|.+++.++..++.... ..++++ ..|..+. -
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea----~ 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQA----V 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHH----G
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHH----H
Confidence 4688888884 3 45566666676 899999999988877663210 011111 1122111 1
Q ss_pred CCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 114 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
...|+|+..-.-..-..+.++.....++++.+...|++|-.++...
T Consensus 77 ~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 77 PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 2478887643211000111222367888888989898776655544
No 447
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.63 E-value=3.9 Score=32.32 Aligned_cols=74 Identities=18% Similarity=0.228 Sum_probs=53.0
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCCe
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDESF 116 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~~ 116 (252)
++++|-.|++.|. ++..+++.|. +|+.++.+++.++...+.+.. ..++.++.+|+.+.... ..+..
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 89 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV 89 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5688888987653 6666777776 899999998877776665533 34788999999875311 12478
Q ss_pred eEEEeccc
Q 025475 117 DAVIDKGT 124 (252)
Q Consensus 117 D~v~~~~~ 124 (252)
|+++.+..
T Consensus 90 d~lv~nAg 97 (264)
T 3ucx_A 90 DVVINNAF 97 (264)
T ss_dssp SEEEECCC
T ss_pred cEEEECCC
Confidence 99998753
No 448
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=83.58 E-value=3.5 Score=33.38 Aligned_cols=76 Identities=13% Similarity=0.159 Sum_probs=54.0
Q ss_pred CCCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCC
Q 025475 49 TSSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 49 ~~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
.+.+||-.|++.| .++..+++.|. +|++++.++..++.+.+.+.. ..++.++.+|+.+.... ..+.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 3568999998765 36666677776 899999999887776666543 34788999999875311 0146
Q ss_pred eeEEEeccch
Q 025475 116 FDAVIDKGTL 125 (252)
Q Consensus 116 ~D~v~~~~~l 125 (252)
.|+++.+...
T Consensus 109 id~lvnnAg~ 118 (301)
T 3tjr_A 109 VDVVFSNAGI 118 (301)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999987653
No 449
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=83.19 E-value=6.5 Score=31.36 Aligned_cols=75 Identities=12% Similarity=0.111 Sum_probs=44.7
Q ss_pred CCcEEEEccc--C--cH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---------CCCC
Q 025475 50 SSRVLMVGCG--N--AL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 50 ~~~vLD~G~G--~--G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
+.++|-.|++ . |. ++..+++.|. +|++++.++..-+..++.....+.+.++.+|+.+.... .-+.
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 99 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS 99 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578888875 2 32 4455566676 89999988742122222111123467889998875311 1246
Q ss_pred eeEEEeccch
Q 025475 116 FDAVIDKGTL 125 (252)
Q Consensus 116 ~D~v~~~~~l 125 (252)
.|+++.+...
T Consensus 100 iD~lv~~Ag~ 109 (285)
T 2p91_A 100 LDIIVHSIAY 109 (285)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987653
No 450
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=83.16 E-value=4.2 Score=32.49 Aligned_cols=76 Identities=5% Similarity=0.075 Sum_probs=52.8
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
.+.++|-.|++.|. ++..+++.|. +|++++.++..++...+.+.. ..++.++.+|+.+.... .-+.
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45689999987653 5666777776 899999998877766665543 34788999999875311 1146
Q ss_pred eeEEEeccch
Q 025475 116 FDAVIDKGTL 125 (252)
Q Consensus 116 ~D~v~~~~~l 125 (252)
.|+++.+...
T Consensus 102 id~lv~nAg~ 111 (279)
T 3sju_A 102 IGILVNSAGR 111 (279)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 8999987653
No 451
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=83.05 E-value=3.4 Score=32.30 Aligned_cols=76 Identities=17% Similarity=0.245 Sum_probs=53.3
Q ss_pred CCCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCC
Q 025475 49 TSSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 49 ~~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
.+.++|-.|++.| .++..+++.|. +|+++|.+++..+.....+.. ..++.++.+|+.+.... ..+.
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3567888898765 36666677776 899999999877776665533 34678899999875311 1136
Q ss_pred eeEEEeccch
Q 025475 116 FDAVIDKGTL 125 (252)
Q Consensus 116 ~D~v~~~~~l 125 (252)
.|+++.+..+
T Consensus 87 id~li~~Ag~ 96 (253)
T 3qiv_A 87 IDYLVNNAAI 96 (253)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999987654
No 452
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=82.84 E-value=4.2 Score=32.48 Aligned_cols=109 Identities=16% Similarity=0.197 Sum_probs=60.9
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHH-HHHHHHHhhcC-CCCCeEEEccccCCCCC----C-----CCC
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSV-AIDMMKMKYEE-IPQLKYLQMDVRDMSFF----E-----DES 115 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~-~i~~a~~~~~~-~~~v~~~~~d~~~~~~~----~-----~~~ 115 (252)
++++|-.|++.|. ++..+++.|. +|++++.++. ..+...+.+.. ..++.++.+|+.+.... . -+.
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 107 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 107 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578888876552 5555666676 8999988753 23333332322 23678888998774311 0 146
Q ss_pred eeEEEeccchhhhc-CCCCChhhHH-----------HHHHHHHHcccCCcEEEEEE
Q 025475 116 FDAVIDKGTLDSLM-CGTNAPISAS-----------QMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 116 ~D~v~~~~~l~~~~-~~~~~~~~~~-----------~~l~~~~~~L~~gG~l~i~~ 159 (252)
.|+++.+....... ....+.++.. .+++.+.+.|+.+|.++.+.
T Consensus 108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 89999876533210 0011223332 23455566666678777654
No 453
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=82.56 E-value=5.5 Score=31.90 Aligned_cols=76 Identities=17% Similarity=0.225 Sum_probs=53.6
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
.+.++|-.|++.|. .+..+++.|. +|+.+|.+++.++.....+.. ..++.++.+|+.+.... ..+.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35578888887653 5566667776 899999999877777666643 34688899999875311 1247
Q ss_pred eeEEEeccch
Q 025475 116 FDAVIDKGTL 125 (252)
Q Consensus 116 ~D~v~~~~~l 125 (252)
.|+++.+...
T Consensus 106 iD~lVnnAg~ 115 (283)
T 3v8b_A 106 LDIVVANAGI 115 (283)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987654
No 454
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=82.24 E-value=4.6 Score=31.78 Aligned_cols=75 Identities=15% Similarity=0.288 Sum_probs=53.1
Q ss_pred CCcEEEEcc-cCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCCCCC---------CCC
Q 025475 50 SSRVLMVGC-GNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFF---------EDE 114 (252)
Q Consensus 50 ~~~vLD~G~-G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~~~~---------~~~ 114 (252)
+.++|-.|+ |.|. ++..+++.|. +|++++.++..++.....+... .++.++.+|+.+.... ..+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 557888887 5542 6666777776 8999999988777776666432 3789999999875311 114
Q ss_pred CeeEEEeccch
Q 025475 115 SFDAVIDKGTL 125 (252)
Q Consensus 115 ~~D~v~~~~~l 125 (252)
..|+++.+..+
T Consensus 101 ~id~li~~Ag~ 111 (266)
T 3o38_A 101 RLDVLVNNAGL 111 (266)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 68999987654
No 455
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=82.07 E-value=6.5 Score=29.73 Aligned_cols=98 Identities=11% Similarity=0.108 Sum_probs=55.7
Q ss_pred cEEEEccc--CcH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhhh
Q 025475 52 RVLMVGCG--NAL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 128 (252)
Q Consensus 52 ~vLD~G~G--~G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~~ 128 (252)
+||-.|+. .|. ++..|++.|. +|++++.++....... ..+++++.+|+.+.....-..+|+|+......+-
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~ 75 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRL-----GATVATLVKEPLVLTEADLDSVDAVVDALSVPWG 75 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHT-----CTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTT
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEeccccccccc-----CCCceEEecccccccHhhcccCCEEEECCccCCC
Confidence 57778863 232 4444555566 8999999987554321 1468999999988642111357999876543210
Q ss_pred cCCCCChhhHHHHHHHHHHcccC-CcEEEEE
Q 025475 129 MCGTNAPISASQMLGEVSRLLKP-GGIYMLI 158 (252)
Q Consensus 129 ~~~~~~~~~~~~~l~~~~~~L~~-gG~l~i~ 158 (252)
......-......+.+.++. |+.+++.
T Consensus 76 ---~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 76 ---SGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp ---SSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred ---cchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 01112233344555555544 4555554
No 456
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.03 E-value=6.6 Score=30.12 Aligned_cols=70 Identities=17% Similarity=0.153 Sum_probs=44.6
Q ss_pred CCCcEEEEcccC--cH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCC-eEEEccccCCCCCCCCCeeEEEeccc
Q 025475 49 TSSRVLMVGCGN--AL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQL-KYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 49 ~~~~vLD~G~G~--G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v-~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
.+++||-.|+.. |. ++..|++.|. +|++++.++...+.... .++ +++.+|+.+.....-+..|+|+.+..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag 93 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRE-----RGASDIVVANLEEDFSHAFASIDAVVFAAG 93 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH-----TTCSEEEECCTTSCCGGGGTTCSEEEECCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHh-----CCCceEEEcccHHHHHHHHcCCCEEEECCC
Confidence 356899888743 32 4455556676 89999998875544332 257 88999987211011236899997654
No 457
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=81.87 E-value=0.91 Score=38.28 Aligned_cols=99 Identities=11% Similarity=0.201 Sum_probs=52.4
Q ss_pred CCcEEEEcccC-cHhHHHHH-HcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 50 SSRVLMVGCGN-ALMSEDMV-KDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 50 ~~~vLD~G~G~-G~~~~~l~-~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
+.+|+-+|+|. |......+ ..|. +|+++|.++..++.+++.... .+.....+..++... -..+|+|+..-....
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~--~~~~~~~~~~~l~~~-~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGG--RVITLTATEANIKKS-VQHADLLIGAVLVPG 241 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--SEEEEECCHHHHHHH-HHHCSEEEECCC---
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCc--eEEEecCCHHHHHHH-HhCCCEEEECCCCCc
Confidence 46899999863 44333333 3366 899999999877776654321 111111111111100 125899986433221
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
. ..+.-+.+++.+.|++||.++...
T Consensus 242 ~-------~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 242 A-------KAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp -----------CCSCHHHHTTSCTTCEEEECC
T ss_pred c-------ccchhHHHHHHHhhcCCCEEEEEe
Confidence 0 111112456677889999877644
No 458
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=81.79 E-value=3.2 Score=34.77 Aligned_cols=95 Identities=15% Similarity=0.173 Sum_probs=56.3
Q ss_pred CCCCCcEEEEc-cc-CcHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC--CCCCCeeEEEe
Q 025475 47 IPTSSRVLMVG-CG-NALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF--FEDESFDAVID 121 (252)
Q Consensus 47 ~~~~~~vLD~G-~G-~G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~--~~~~~~D~v~~ 121 (252)
+.++.+||-.| +| .|..+..+++. |. +|++++ +++-.+.+++. +.-.++..+-.+... .....+|+|+.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~l----Ga~~v~~~~~~~~~~~~~~~~g~D~vid 254 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKL----GADDVIDYKSGSVEEQLKSLKPFDFILD 254 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHT----TCSEEEETTSSCHHHHHHTSCCBSEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHc----CCCEEEECCchHHHHHHhhcCCCCEEEE
Confidence 55778999999 34 58888777776 55 899998 66666666443 111222211111100 01246999986
Q ss_pred ccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 122 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.-. .....+....++|+++|.++...
T Consensus 255 ~~g------------~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 255 NVG------------GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp SSC------------TTHHHHGGGGBCSSSCCEEEESC
T ss_pred CCC------------ChhhhhHHHHHhhcCCcEEEEeC
Confidence 422 11124566778899999987754
No 459
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=81.78 E-value=0.71 Score=39.11 Aligned_cols=100 Identities=13% Similarity=0.211 Sum_probs=54.0
Q ss_pred CCCcEEEEcccC-cHhHHHHHH-cCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchh
Q 025475 49 TSSRVLMVGCGN-ALMSEDMVK-DGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 126 (252)
Q Consensus 49 ~~~~vLD~G~G~-G~~~~~l~~-~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~ 126 (252)
++.+|+-+|+|. |......+. .|. +|+++|.++..++.+++.+.. .+.....+..++... -..+|+|+..-...
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~--~~~~~~~~~~~l~~~-l~~aDvVi~~~~~p 242 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCG--RIHTRYSSAYELEGA-VKRADLVIGAVLVP 242 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--SSEEEECCHHHHHHH-HHHCSEEEECCCCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCC--eeEeccCCHHHHHHH-HcCCCEEEECCCcC
Confidence 456899999963 544444443 356 899999999888777664421 222211111111100 12579998632111
Q ss_pred hhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 127 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
.. +.+.-+.++..+.|++||.++.+.
T Consensus 243 ~~-------~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 243 GA-------KAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp TS-------CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CC-------CCcceecHHHHhcCCCCcEEEEEe
Confidence 00 000111345667789999876544
No 460
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=81.76 E-value=25 Score=30.54 Aligned_cols=100 Identities=13% Similarity=0.145 Sum_probs=59.1
Q ss_pred CcEEEEcccC--cHhHHHHHHcCCCcEEEEeCCHHH-HHHHHHhh----cCC-----------CCCeEEEccccCCCCCC
Q 025475 51 SRVLMVGCGN--ALMSEDMVKDGYEDIVNIDISSVA-IDMMKMKY----EEI-----------PQLKYLQMDVRDMSFFE 112 (252)
Q Consensus 51 ~~vLD~G~G~--G~~~~~l~~~~~~~v~~vD~s~~~-i~~a~~~~----~~~-----------~~v~~~~~d~~~~~~~~ 112 (252)
.+|.-||+|. +.++..++..|. +|++.|++++. ....+..+ +.. .++++ ..|... .
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t~dl~a---l- 128 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-TSDFHK---L- 128 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-ESCGGG---C-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-eCCHHH---H-
Confidence 4789999995 456777777777 99999999872 11111111 110 12222 223321 1
Q ss_pred CCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhh
Q 025475 113 DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKA 165 (252)
Q Consensus 113 ~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~ 165 (252)
...|+|+..-+ .+.+....+++++...++++.++...+-..+..
T Consensus 129 -~~aDlVIeAVp--------e~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~ 172 (460)
T 3k6j_A 129 -SNCDLIVESVI--------EDMKLKKELFANLENICKSTCIFGTNTSSLDLN 172 (460)
T ss_dssp -TTCSEEEECCC--------SCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH
T ss_pred -ccCCEEEEcCC--------CCHHHHHHHHHHHHhhCCCCCEEEecCCChhHH
Confidence 35899996422 233556788899999999887765434333433
No 461
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=81.67 E-value=5 Score=31.68 Aligned_cols=109 Identities=13% Similarity=0.120 Sum_probs=62.0
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCC---HHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CC
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDIS---SVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------ED 113 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s---~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~ 113 (252)
+.++|-.|++.|. .+..+++.|. +|+.++.+ .+.++.....+.. ..++.++.+|+.+.... .-
T Consensus 11 ~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5578888887653 4455555666 78888764 3444444444432 34688899999875311 11
Q ss_pred CCeeEEEeccchhhh-cCCCCChhhHH-----------HHHHHHHHcccCCcEEEEEE
Q 025475 114 ESFDAVIDKGTLDSL-MCGTNAPISAS-----------QMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 114 ~~~D~v~~~~~l~~~-~~~~~~~~~~~-----------~~l~~~~~~L~~gG~l~i~~ 159 (252)
+..|+++.+...... .....+.++.. .+++.+...|+++|.++.+.
T Consensus 90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 478999987653321 00111233332 23345556666778777654
No 462
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=81.49 E-value=8.2 Score=25.64 Aligned_cols=69 Identities=19% Similarity=0.236 Sum_probs=43.3
Q ss_pred CCcEEEEcccC-cH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC--CCCCeeEEEecc
Q 025475 50 SSRVLMVGCGN-AL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF--EDESFDAVIDKG 123 (252)
Q Consensus 50 ~~~vLD~G~G~-G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~--~~~~~D~v~~~~ 123 (252)
.++|+-+|+|. |. .+..+...|..+++++|.++..++.... ..+.++..|+.+.... .-..+|+|+..-
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-----MGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-----TTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-----CCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 45799999952 33 3334445563489999999987666551 3467777777653211 113589998654
No 463
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.47 E-value=10 Score=30.29 Aligned_cols=84 Identities=14% Similarity=0.201 Sum_probs=53.2
Q ss_pred CcEEEEcc-cC-c-HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 51 SRVLMVGC-GN-A-LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 51 ~~vLD~G~-G~-G-~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
++|.-+|+ |. | .++..+...|. +|+++|.+++.++.+.+. + +.. .+.. ..-...|+|+..-
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~----g-~~~-----~~~~-~~~~~aDvVi~av---- 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGM----G-IPL-----TDGD-GWIDEADVVVLAL---- 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHT----T-CCC-----CCSS-GGGGTCSEEEECS----
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc----C-CCc-----CCHH-HHhcCCCEEEEcC----
Confidence 47999999 84 3 45566666665 899999999877766542 1 221 1221 1113589998643
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEE
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYM 156 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 156 (252)
++.....+++++...++++..++
T Consensus 76 ------~~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 76 ------PDNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ------CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred ------CchHHHHHHHHHHHhCCCCCEEE
Confidence 23445777888888887766443
No 464
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=81.45 E-value=15 Score=29.10 Aligned_cols=89 Identities=17% Similarity=0.204 Sum_probs=53.4
Q ss_pred cEEEEcccC-c-HhHHHHHHcCC-CcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCC-CeeEEEeccchhh
Q 025475 52 RVLMVGCGN-A-LMSEDMVKDGY-EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDE-SFDAVIDKGTLDS 127 (252)
Q Consensus 52 ~vLD~G~G~-G-~~~~~l~~~~~-~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~-~~D~v~~~~~l~~ 127 (252)
+|.-+|+|. | .++..+...|. .+|+++|.+++.++.+++. +.......|..+. -. ..|+|+..-.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~~~~~~~~~~~~----~~~~aDvVilavp--- 71 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GIIDEGTTSIAKV----EDFSPDFVMLSSP--- 71 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TSCSEEESCGGGG----GGTCCSEEEECSC---
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC----CCcccccCCHHHH----hcCCCCEEEEcCC---
Confidence 678889884 3 34555555553 3799999999877766543 1111111222221 12 5899986532
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEE
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLI 158 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~ 158 (252)
+.....++.++...++++..++..
T Consensus 72 -------~~~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 72 -------VRTFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp -------HHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred -------HHHHHHHHHHHHhhCCCCcEEEEC
Confidence 234457778888888888765543
No 465
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=81.05 E-value=2.3 Score=33.50 Aligned_cols=76 Identities=11% Similarity=0.208 Sum_probs=53.1
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC--------CCCCe
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF--------EDESF 116 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~--------~~~~~ 116 (252)
.+.++|-.|++.|. ++..+++.|. +|++++.++..++.....+.. ..++.++.+|+.+.... ..+..
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 35678888887663 6666777776 899999998776666555533 34688899999875311 01578
Q ss_pred eEEEeccch
Q 025475 117 DAVIDKGTL 125 (252)
Q Consensus 117 D~v~~~~~l 125 (252)
|+++.+...
T Consensus 85 d~lv~nAg~ 93 (252)
T 3h7a_A 85 EVTIFNVGA 93 (252)
T ss_dssp EEEEECCCC
T ss_pred eEEEECCCc
Confidence 999987654
No 466
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=80.96 E-value=4.1 Score=32.01 Aligned_cols=76 Identities=12% Similarity=0.180 Sum_probs=52.8
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
.++++|-.|++.|. ++..+++.|. +|+.+|.++...+.....+.. ..++.++.+|+.+.... ..+.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 89 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK 89 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35578888887653 5666667776 899999998877766665533 34788899999875311 1146
Q ss_pred eeEEEeccch
Q 025475 116 FDAVIDKGTL 125 (252)
Q Consensus 116 ~D~v~~~~~l 125 (252)
.|+++.+...
T Consensus 90 id~lv~nAg~ 99 (256)
T 3gaf_A 90 ITVLVNNAGG 99 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987654
No 467
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=80.90 E-value=2.3 Score=37.37 Aligned_cols=90 Identities=18% Similarity=0.230 Sum_probs=54.7
Q ss_pred CCCCCcEEEEcccC-cHhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 47 IPTSSRVLMVGCGN-ALMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 47 ~~~~~~vLD~G~G~-G~~~~~l~~~-~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
..++.+|+-+|+|. |......++. |. +|+++|.++.-...++.. .+.. .++.+. . ...|+|+..-.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~-----Ga~~--~~l~e~--l--~~aDvVi~atg 338 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMME-----GFDV--VTVEEA--I--GDADIVVTATG 338 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT-----TCEE--CCHHHH--G--GGCSEEEECSS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-----CCEE--ecHHHH--H--hCCCEEEECCC
Confidence 45678999999974 5544444443 55 899999999876666543 1222 222222 1 25899987532
Q ss_pred hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 125 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 125 l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
-.++ - -.+..+.|++||+++.+..
T Consensus 339 t~~~-------i-----~~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 339 NKDI-------I-----MLEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp SSCS-------B-----CHHHHHHSCTTCEEEECSS
T ss_pred CHHH-------H-----HHHHHHhcCCCcEEEEeCC
Confidence 2221 1 1245567899999876554
No 468
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=80.77 E-value=4.5 Score=31.72 Aligned_cols=75 Identities=15% Similarity=0.333 Sum_probs=52.8
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC----CCCCeEEEccccCCCCC---------CC
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE----IPQLKYLQMDVRDMSFF---------ED 113 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~----~~~v~~~~~d~~~~~~~---------~~ 113 (252)
+.++|-.|++.|. ++..+++.|. +|+.++.++..++...+.+.. ..++.++.+|+.+.... ..
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 5578888887653 6666677776 899999998877766655422 14688999999875311 11
Q ss_pred CCeeEEEeccch
Q 025475 114 ESFDAVIDKGTL 125 (252)
Q Consensus 114 ~~~D~v~~~~~l 125 (252)
+..|+++.+...
T Consensus 86 g~iD~lvnnAg~ 97 (250)
T 3nyw_A 86 GAVDILVNAAAM 97 (250)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 478999987654
No 469
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=80.77 E-value=6.9 Score=30.82 Aligned_cols=74 Identities=12% Similarity=0.148 Sum_probs=49.1
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCC---------CCCee
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFE---------DESFD 117 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~---------~~~~D 117 (252)
+.+||-.|++.|. ++..+++.|. +|++++.++...+.....+....++.++.+|+.+..... .+..|
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 94 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 94 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4578888876542 5555666676 899999998766555444433236888999998753110 13689
Q ss_pred EEEeccc
Q 025475 118 AVIDKGT 124 (252)
Q Consensus 118 ~v~~~~~ 124 (252)
+|+.+..
T Consensus 95 ~li~~Ag 101 (278)
T 2bgk_A 95 IMFGNVG 101 (278)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9997654
No 470
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=80.76 E-value=5.4 Score=30.90 Aligned_cols=75 Identities=11% Similarity=0.173 Sum_probs=49.6
Q ss_pred CCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC----C-----CCCee
Q 025475 50 SSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF----E-----DESFD 117 (252)
Q Consensus 50 ~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~----~-----~~~~D 117 (252)
++++|-.|++.| .++..+++.|. +|++++.++...+.....+....++.++.+|+.+.... . -+..|
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 457888887554 24555566676 89999999877666555543334688899998874311 0 13689
Q ss_pred EEEeccch
Q 025475 118 AVIDKGTL 125 (252)
Q Consensus 118 ~v~~~~~l 125 (252)
+|+.+...
T Consensus 85 ~li~~Ag~ 92 (251)
T 1zk4_A 85 TLVNNAGI 92 (251)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99887543
No 471
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=80.75 E-value=5.3 Score=31.74 Aligned_cols=70 Identities=10% Similarity=0.155 Sum_probs=50.4
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC--------CCCCCeeE
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF--------FEDESFDA 118 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~--------~~~~~~D~ 118 (252)
+.++|-.|++.|. ++..+++.|. +|+++|.++..++.....+. .++.++.+|+.+... ...+..|+
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELG--NRAEFVSTNVTSEDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHTTSSEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHhCCCCe
Confidence 4578888987653 5666677776 89999999987777666552 368899999987531 11246899
Q ss_pred EEec
Q 025475 119 VIDK 122 (252)
Q Consensus 119 v~~~ 122 (252)
++.+
T Consensus 107 lv~~ 110 (281)
T 3ppi_A 107 AVVA 110 (281)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8877
No 472
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=80.66 E-value=8.9 Score=31.26 Aligned_cols=97 Identities=12% Similarity=0.165 Sum_probs=53.3
Q ss_pred CCCcEEEEcccC-c-HhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhc-CCCCCeEEEccccCCCCCCCCCeeEEEeccc
Q 025475 49 TSSRVLMVGCGN-A-LMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYE-EIPQLKYLQMDVRDMSFFEDESFDAVIDKGT 124 (252)
Q Consensus 49 ~~~~vLD~G~G~-G-~~~~~l~~~~-~~~v~~vD~s~~~i~~a~~~~~-~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~ 124 (252)
+..+|.-+|+|. | ..+..++..+ ..+++.+|++++....+..... ..++++. ..|..++ ...|+|+....
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~-t~d~~~l-----~~aD~Vi~aag 86 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEI-SKDLSAS-----AHSKVVIFTVN 86 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEE-ESCGGGG-----TTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE-eCCHHHH-----CCCCEEEEcCC
Confidence 345899999985 3 3555555555 4589999999853323322221 1123443 2343222 25899987641
Q ss_pred ------------hhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 125 ------------LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 125 ------------l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
...+ +-..++++.+.+.. |++.+++.+
T Consensus 87 ~~~pG~tR~dl~~~n~-------~i~~~i~~~i~~~~-p~a~iiv~s 125 (303)
T 2i6t_A 87 SLGSSQSYLDVVQSNV-------DMFRALVPALGHYS-QHSVLLVAS 125 (303)
T ss_dssp C----CCHHHHHHHHH-------HHHHHHHHHHHHHT-TTCEEEECS
T ss_pred CCCCCCCHHHHHHHHH-------HHHHHHHHHHHHhC-CCeEEEEcC
Confidence 2222 34566677777765 899987744
No 473
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=80.50 E-value=4.4 Score=32.29 Aligned_cols=75 Identities=8% Similarity=0.130 Sum_probs=50.5
Q ss_pred CCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---------CCCCee
Q 025475 50 SSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDESFD 117 (252)
Q Consensus 50 ~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~~~D 117 (252)
++++|-.|++.| .++..+++.|. +|++++.++..++...+.+...+++.++.+|+.+.... ..+..|
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD 107 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 457888888655 25556666676 89999999877666555554333677888888774311 124689
Q ss_pred EEEeccch
Q 025475 118 AVIDKGTL 125 (252)
Q Consensus 118 ~v~~~~~l 125 (252)
+++.+...
T Consensus 108 ~lvnnAg~ 115 (276)
T 2b4q_A 108 ILVNNAGT 115 (276)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99987653
No 474
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=80.38 E-value=4.6 Score=31.33 Aligned_cols=75 Identities=13% Similarity=0.257 Sum_probs=52.4
Q ss_pred CCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCC---------CCCCCe
Q 025475 50 SSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSF---------FEDESF 116 (252)
Q Consensus 50 ~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~---------~~~~~~ 116 (252)
++++|-.|++.| .++..+++.|. +|++++.++...+.....+.. ..++.++.+|+.+... -..+..
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 457888887655 35666677776 899999998877766665543 2478889999987531 123468
Q ss_pred eEEEeccch
Q 025475 117 DAVIDKGTL 125 (252)
Q Consensus 117 D~v~~~~~l 125 (252)
|+++.+...
T Consensus 84 d~li~~Ag~ 92 (247)
T 3lyl_A 84 DILVNNAGI 92 (247)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999987653
No 475
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.37 E-value=5.2 Score=31.55 Aligned_cols=75 Identities=17% Similarity=0.251 Sum_probs=52.4
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCCeEEEccccCCCCC---------CCCC
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~--~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
++++|-.|++.|. .+..+++.|. +|+.++.+++.++.+...+... .++.++.+|+.+.... .-+.
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 5578888876552 5566667776 8999999998877766665432 3688899999875311 1146
Q ss_pred eeEEEeccch
Q 025475 116 FDAVIDKGTL 125 (252)
Q Consensus 116 ~D~v~~~~~l 125 (252)
.|+++.+...
T Consensus 89 id~lvnnAg~ 98 (262)
T 3pk0_A 89 IDVVCANAGV 98 (262)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987653
No 476
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=80.26 E-value=4.8 Score=28.87 Aligned_cols=69 Identities=19% Similarity=0.221 Sum_probs=40.4
Q ss_pred CCCcEEEEcccC-cH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC---CCCCCeeEEEec
Q 025475 49 TSSRVLMVGCGN-AL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF---FEDESFDAVIDK 122 (252)
Q Consensus 49 ~~~~vLD~G~G~-G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~---~~~~~~D~v~~~ 122 (252)
++.+|+-+|+|. |. ++..+...|. +|+++|.++..++.++. . ..+..+.+|..+... ..-..+|+|+..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---~-~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---E-FSGFTVVGDAAEFETLKECGMEKADMVFAF 91 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---T-CCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---c-CCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence 556899999874 44 3334444565 89999998865433221 1 234566666544210 112358988864
No 477
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=80.25 E-value=5.6 Score=31.66 Aligned_cols=75 Identities=12% Similarity=0.167 Sum_probs=52.2
Q ss_pred CCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC----CCeEEEccccCCCCC---------CC
Q 025475 50 SSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP----QLKYLQMDVRDMSFF---------ED 113 (252)
Q Consensus 50 ~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~----~v~~~~~d~~~~~~~---------~~ 113 (252)
++++|-.|++.| ..+..+++.|. +|+.+|.++...+...+.+...+ ++.++.+|+.+.... ..
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 567888888765 35666777776 89999999887776666554322 578889999875311 11
Q ss_pred CCeeEEEeccch
Q 025475 114 ESFDAVIDKGTL 125 (252)
Q Consensus 114 ~~~D~v~~~~~l 125 (252)
+..|+++.+...
T Consensus 90 g~id~lv~nAg~ 101 (281)
T 3svt_A 90 GRLHGVVHCAGG 101 (281)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999987653
No 478
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=80.21 E-value=0.91 Score=38.17 Aligned_cols=100 Identities=11% Similarity=0.195 Sum_probs=54.9
Q ss_pred CCcEEEEcccC-cHhHHHHHH-cCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 50 SSRVLMVGCGN-ALMSEDMVK-DGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 50 ~~~vLD~G~G~-G~~~~~l~~-~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
+.+|+-+|+|. |..+...+. .|. +|+++|.+++-.+.+++.... .+.....+..++.. .-..+|+|+..-....
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~DvVI~~~~~~~ 242 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS--RVELLYSNSAEIET-AVAEADLLIGAVLVPG 242 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG--GSEEEECCHHHHHH-HHHTCSEEEECCCCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc--eeEeeeCCHHHHHH-HHcCCCEEEECCCcCC
Confidence 36899999963 554444444 366 899999999888777665432 22222211111110 0125899986432211
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEEEc
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 160 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~ 160 (252)
. ..+.-+.+...+.|++||.++...+
T Consensus 243 ~-------~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 243 R-------RAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp S-------SCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred C-------CCCeecCHHHHhhCCCCCEEEEEec
Confidence 0 0000012345577899998776543
No 479
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.14 E-value=3.9 Score=32.25 Aligned_cols=76 Identities=7% Similarity=0.097 Sum_probs=52.2
Q ss_pred CCCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCC
Q 025475 49 TSSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 49 ~~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
.+.+||-.|++.| .++..+++.|. +|++++.++..++.....+.. ..++.++.+|+.+.... ..+.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 3567888887655 25555666676 899999999877766665533 24688899999875311 1146
Q ss_pred eeEEEeccch
Q 025475 116 FDAVIDKGTL 125 (252)
Q Consensus 116 ~D~v~~~~~l 125 (252)
.|+++.+...
T Consensus 107 id~lv~~Ag~ 116 (262)
T 3rkr_A 107 CDVLVNNAGV 116 (262)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999987654
No 480
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=80.03 E-value=5.2 Score=32.69 Aligned_cols=98 Identities=15% Similarity=0.180 Sum_probs=56.2
Q ss_pred CcEEEEcccC--cHhHHHHHHcCCCcEEEEeCCHHHHHHHHHh---hc--CCCCCeEEEccccCCCCCCCCCeeEEEecc
Q 025475 51 SRVLMVGCGN--ALMSEDMVKDGYEDIVNIDISSVAIDMMKMK---YE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 51 ~~vLD~G~G~--G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~---~~--~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 123 (252)
++|+-+|+|. +.++..+++.|. +|+.++.++ .+..++. .. ..+..++....+...+......+|+|+..-
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilav 79 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCI 79 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEec
Confidence 4788999984 346666666665 899999986 2444443 11 112222211111111101123689999764
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcC
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 161 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 161 (252)
--+.+ ..+++.+...++++..++....+
T Consensus 80 K~~~~----------~~~l~~l~~~l~~~t~Iv~~~nG 107 (320)
T 3i83_A 80 KVVEG----------ADRVGLLRDAVAPDTGIVLISNG 107 (320)
T ss_dssp CCCTT----------CCHHHHHTTSCCTTCEEEEECSS
T ss_pred CCCCh----------HHHHHHHHhhcCCCCEEEEeCCC
Confidence 43333 45678888889888776655544
No 481
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=79.80 E-value=3.1 Score=35.22 Aligned_cols=105 Identities=16% Similarity=0.174 Sum_probs=64.0
Q ss_pred hHHHHHhhC-CCCCcEEEEcccCcHhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCee
Q 025475 39 LRPFVRKYI-PTSSRVLMVGCGNALMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFD 117 (252)
Q Consensus 39 l~~~~~~~~-~~~~~vLD~G~G~G~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D 117 (252)
..+++.+.+ +.+.+||.++.+.|.++..+... .+++.+.-|-......+.+ +. .... .+ ... .....||
T Consensus 34 ~~~~l~~~~~~~~~~~l~~n~~~g~~~~~~~~~--~~~~~~~~~~~~~~~l~~~--~~-~~~~--~~--~~~-~~~~~~d 103 (381)
T 3dmg_A 34 VHDLLQKTVEPFGERALDLNPGVGWGSLPLEGR--MAVERLETSRAAFRCLTAS--GL-QARL--AL--PWE-AAAGAYD 103 (381)
T ss_dssp HHHHHHTTCCCCSSEEEESSCTTSTTTGGGBTT--BEEEEEECBHHHHHHHHHT--TC-CCEE--CC--GGG-SCTTCEE
T ss_pred HHHHHHHHHHHhCCcEEEecCCCCccccccCCC--CceEEEeCcHHHHHHHHHc--CC-Cccc--cC--Ccc-CCcCCCC
Confidence 445555554 34458999999999887777532 3677776665554443332 11 1211 11 121 2345799
Q ss_pred EEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEE
Q 025475 118 AVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 159 (252)
Q Consensus 118 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~ 159 (252)
+|+....=+ .........|.++.+.|++||.+++..
T Consensus 104 ~v~~~~Pk~------k~~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 104 LVVLALPAG------RGTAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp EEEEECCGG------GCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEECCcc------hhHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 999654311 011345778899999999999998776
No 482
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=79.74 E-value=20 Score=28.05 Aligned_cols=95 Identities=12% Similarity=0.212 Sum_probs=56.9
Q ss_pred CCcEEEEcccC-c-HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCCCCCCeeEEEeccchhh
Q 025475 50 SSRVLMVGCGN-A-LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 127 (252)
Q Consensus 50 ~~~vLD~G~G~-G-~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~~l~~ 127 (252)
+++|.-+|+|. | .++..+...|...++++|.+++..+.+.+.+ .+.. ..+..+.. ...|+|+..-.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~----g~~~-~~~~~~~~----~~~Dvvi~av~--- 77 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV----EAEY-TTDLAEVN----PYAKLYIVSLK--- 77 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT----TCEE-ESCGGGSC----SCCSEEEECCC---
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc----CCce-eCCHHHHh----cCCCEEEEecC---
Confidence 35799999984 3 3455555666523899999998777666543 1222 22332221 25899986432
Q ss_pred hcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCCh
Q 025475 128 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 163 (252)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~ 163 (252)
+.....+++.+...+++|..++-.....+
T Consensus 78 -------~~~~~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 78 -------DSAFAELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp -------HHHHHHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred -------HHHHHHHHHHHHhhcCCCcEEEECCCCCc
Confidence 23446677777777777765554443344
No 483
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=79.48 E-value=6.3 Score=31.85 Aligned_cols=92 Identities=15% Similarity=0.194 Sum_probs=55.8
Q ss_pred CcEEEEcccC-cH-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-------CC-----------------CCeEEEcc
Q 025475 51 SRVLMVGCGN-AL-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-------IP-----------------QLKYLQMD 104 (252)
Q Consensus 51 ~~vLD~G~G~-G~-~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-------~~-----------------~v~~~~~d 104 (252)
.+|.-+|+|. |. ++..++..|. +|+++|.+++.++.++..+.. .+ ++++ ..|
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-STD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-ESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-ecC
Confidence 4799999985 44 6667777776 899999999888776443210 01 1111 122
Q ss_pred ccCCCCCCCCCeeEEEeccchhhhcCCCCChhhHHHHHHHHHHcccCCcEEE
Q 025475 105 VRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYM 156 (252)
Q Consensus 105 ~~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 156 (252)
..+ .-...|+|+..-. .+.+....++.++...++++..++
T Consensus 94 ~~~----~~~~aD~Vi~avp--------~~~~~~~~v~~~l~~~~~~~~iv~ 133 (302)
T 1f0y_A 94 AAS----VVHSTDLVVEAIV--------ENLKVKNELFKRLDKFAAEHTIFA 133 (302)
T ss_dssp HHH----HTTSCSEEEECCC--------SCHHHHHHHHHHHTTTSCTTCEEE
T ss_pred HHH----hhcCCCEEEEcCc--------CcHHHHHHHHHHHHhhCCCCeEEE
Confidence 211 1135899886421 122335677888888888776543
No 484
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=79.45 E-value=4.1 Score=32.34 Aligned_cols=75 Identities=12% Similarity=0.177 Sum_probs=51.8
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCCe
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDESF 116 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~~ 116 (252)
++++|-.|++.|. ++..+++.|. +|++++.+++.++.....+.. ..++.++.+|+.+.... .-+..
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578888887653 5566667776 899999998877776665533 23678888998875311 11468
Q ss_pred eEEEeccch
Q 025475 117 DAVIDKGTL 125 (252)
Q Consensus 117 D~v~~~~~l 125 (252)
|+++.+..+
T Consensus 83 D~lVnnAG~ 91 (264)
T 3tfo_A 83 DVLVNNAGV 91 (264)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999987643
No 485
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=79.25 E-value=7.7 Score=30.45 Aligned_cols=75 Identities=15% Similarity=0.231 Sum_probs=50.7
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCCe
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDESF 116 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~~ 116 (252)
++++|-.|++.|. ++..+++.|. +|++++.++..++.....+.. ..++.++.+|+.+.... .-+..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 85 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4578888886653 5556666776 899999998777665555433 23678889998875311 01468
Q ss_pred eEEEeccch
Q 025475 117 DAVIDKGTL 125 (252)
Q Consensus 117 D~v~~~~~l 125 (252)
|+++.+...
T Consensus 86 d~lv~nAg~ 94 (262)
T 1zem_A 86 DFLFNNAGY 94 (262)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999987543
No 486
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=79.08 E-value=19 Score=29.25 Aligned_cols=101 Identities=10% Similarity=0.113 Sum_probs=59.1
Q ss_pred CCCcEEEEcccC-c-HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCCeEEE-ccccCCCCCCCCCeeEEEecc
Q 025475 49 TSSRVLMVGCGN-A-LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQ-MDVRDMSFFEDESFDAVIDKG 123 (252)
Q Consensus 49 ~~~~vLD~G~G~-G-~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~--~~~~v~~~~-~d~~~~~~~~~~~~D~v~~~~ 123 (252)
..++|.-+|+|. | .++..+++.|. +|+.+ .+++.++..++.-. ..+...+.. ....... .....+|+|+..-
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vilav 94 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLVLFCV 94 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEEEECC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEEEEEc
Confidence 356899999984 4 46666666665 89999 88887777765421 011111110 0111111 1124689988653
Q ss_pred chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCC
Q 025475 124 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 162 (252)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 162 (252)
. ..+...+++.+...++++..++....+-
T Consensus 95 k----------~~~~~~~l~~l~~~l~~~~~iv~~~nGi 123 (318)
T 3hwr_A 95 K----------STDTQSAALAMKPALAKSALVLSLQNGV 123 (318)
T ss_dssp C----------GGGHHHHHHHHTTTSCTTCEEEEECSSS
T ss_pred c----------cccHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 2 2355788889989998887766555443
No 487
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=78.97 E-value=6.6 Score=31.05 Aligned_cols=75 Identities=16% Similarity=0.228 Sum_probs=50.0
Q ss_pred CCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCCe
Q 025475 50 SSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDESF 116 (252)
Q Consensus 50 ~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~~ 116 (252)
+.+||-.|++.| .++..+++.|. +|++++.++..++.....+.. ..++.++.+|+.+.... ..+..
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 109 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 109 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 457888887654 24555566676 899999998776655554432 23688899998875311 12468
Q ss_pred eEEEeccch
Q 025475 117 DAVIDKGTL 125 (252)
Q Consensus 117 D~v~~~~~l 125 (252)
|+|+.+...
T Consensus 110 D~li~~Ag~ 118 (272)
T 1yb1_A 110 SILVNNAGV 118 (272)
T ss_dssp SEEEECCCC
T ss_pred cEEEECCCc
Confidence 999987643
No 488
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=78.96 E-value=3.7 Score=32.89 Aligned_cols=57 Identities=21% Similarity=0.349 Sum_probs=35.0
Q ss_pred CCeeEEEecc----chhhhcCCCCChhhHHHHHHHHHHcccCCcEEEEEEcCChhhhhhhc
Q 025475 114 ESFDAVIDKG----TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHL 170 (252)
Q Consensus 114 ~~~D~v~~~~----~l~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~ 170 (252)
+.||+|+++- -.||.--+....-....+-....+.|+|||.+++..++..+-.....
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~v 270 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERV 270 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHH
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHH
Confidence 7899999974 24554000000012234445667899999999999988665444444
No 489
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=78.65 E-value=8 Score=30.81 Aligned_cols=75 Identities=15% Similarity=0.275 Sum_probs=51.3
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCC----------------HHHHHHHHHhhcC-CCCCeEEEccccCCC
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDIS----------------SVAIDMMKMKYEE-IPQLKYLQMDVRDMS 109 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s----------------~~~i~~a~~~~~~-~~~v~~~~~d~~~~~ 109 (252)
++++|-.|++.|. ++..+++.|. +|+++|.+ ++.++.....+.. ..++.++.+|+.+..
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 5688999987663 6666777776 89999987 5555555554433 347888999998753
Q ss_pred CC---------CCCCeeEEEeccch
Q 025475 110 FF---------EDESFDAVIDKGTL 125 (252)
Q Consensus 110 ~~---------~~~~~D~v~~~~~l 125 (252)
.. ..+..|+++.+..+
T Consensus 90 ~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 90 ALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcc
Confidence 11 11468999987654
No 490
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=78.62 E-value=7 Score=30.42 Aligned_cols=74 Identities=9% Similarity=0.136 Sum_probs=49.0
Q ss_pred CCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC----C-----CCCe
Q 025475 50 SSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF----E-----DESF 116 (252)
Q Consensus 50 ~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~----~-----~~~~ 116 (252)
+.+||-.|++.| .++..+++.|. +|++++.++...+...+.+.. ..++.++.+|+.+.... . .+..
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV 91 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 557888887654 25555666676 899999998766554444422 24688899999875311 0 1368
Q ss_pred eEEEeccc
Q 025475 117 DAVIDKGT 124 (252)
Q Consensus 117 D~v~~~~~ 124 (252)
|+|+.+..
T Consensus 92 d~vi~~Ag 99 (260)
T 3awd_A 92 DILVACAG 99 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998754
No 491
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=78.56 E-value=6 Score=31.26 Aligned_cols=75 Identities=12% Similarity=0.231 Sum_probs=52.5
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCCeEEEccccCCCCC---------CCCC
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~--~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
++++|-.|++.|. ++..+++.|. +|+.++.++..++.+.+.+.. ..++.++++|+.+.... ..+.
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 98 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG 98 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5678888887653 5666677776 899999998877666555432 34788999999886421 1146
Q ss_pred eeEEEeccch
Q 025475 116 FDAVIDKGTL 125 (252)
Q Consensus 116 ~D~v~~~~~l 125 (252)
.|+++.+...
T Consensus 99 id~lv~nAg~ 108 (266)
T 4egf_A 99 LDVLVNNAGI 108 (266)
T ss_dssp CSEEEEECCC
T ss_pred CCEEEECCCc
Confidence 8999987543
No 492
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=78.54 E-value=4 Score=32.58 Aligned_cols=76 Identities=13% Similarity=0.162 Sum_probs=52.8
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDES 115 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~ 115 (252)
.++++|-.|++.|. ++..+++.|. +|++++.+++.++.....+.. ..++.++.+|+.+.... .-+.
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG 109 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45688888887653 5666677776 899999998766666555533 24788999999875311 1146
Q ss_pred eeEEEeccch
Q 025475 116 FDAVIDKGTL 125 (252)
Q Consensus 116 ~D~v~~~~~l 125 (252)
.|+++.+...
T Consensus 110 iD~lvnnAg~ 119 (276)
T 3r1i_A 110 IDIAVCNAGI 119 (276)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987654
No 493
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=78.44 E-value=6.1 Score=31.44 Aligned_cols=76 Identities=8% Similarity=0.183 Sum_probs=50.3
Q ss_pred CCCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCC---C-----CCCCee
Q 025475 49 TSSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF---F-----EDESFD 117 (252)
Q Consensus 49 ~~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~---~-----~~~~~D 117 (252)
.+.++|-.|++.| .++..+++.|. +|++++.++...+.+++......++.++.+|+.+... + ..+..|
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD 108 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD 108 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence 3568888898765 36666777776 8999997655444444433333468889999987531 1 114689
Q ss_pred EEEeccch
Q 025475 118 AVIDKGTL 125 (252)
Q Consensus 118 ~v~~~~~l 125 (252)
+++.+...
T Consensus 109 ~lv~nAg~ 116 (273)
T 3uf0_A 109 VLVNNAGI 116 (273)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99987653
No 494
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=78.41 E-value=8.2 Score=30.63 Aligned_cols=76 Identities=20% Similarity=0.259 Sum_probs=51.9
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeC-------------CHHHHHHHHHhhcC-CCCCeEEEccccCCCCC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDI-------------SSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF 111 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~-------------s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~ 111 (252)
.++++|-.|++.|. ++..+++.|. +|+++|. +++.++...+.+.. ..++.++++|+.+....
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 35678888887653 6666777776 8999998 66666666555533 34688889999875311
Q ss_pred ---------CCCCeeEEEeccch
Q 025475 112 ---------EDESFDAVIDKGTL 125 (252)
Q Consensus 112 ---------~~~~~D~v~~~~~l 125 (252)
..+..|+++.+...
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 11478999987654
No 495
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=78.41 E-value=4.8 Score=32.92 Aligned_cols=75 Identities=16% Similarity=0.245 Sum_probs=52.5
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CC--CCeEEEccccCCCCC---------CCC
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IP--QLKYLQMDVRDMSFF---------EDE 114 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~--~v~~~~~d~~~~~~~---------~~~ 114 (252)
+.+||-.|++.|. ++..+++.|. +|++++.++..++.+...+.. .. ++.++.+|+.+.... ..+
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 4578999987653 6666677776 899999999877766655432 12 678899999875311 124
Q ss_pred CeeEEEeccch
Q 025475 115 SFDAVIDKGTL 125 (252)
Q Consensus 115 ~~D~v~~~~~l 125 (252)
..|+++.+...
T Consensus 87 ~id~lv~nAg~ 97 (319)
T 3ioy_A 87 PVSILCNNAGV 97 (319)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 78999987654
No 496
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=78.38 E-value=6.8 Score=30.92 Aligned_cols=70 Identities=23% Similarity=0.376 Sum_probs=49.9
Q ss_pred CcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCCeEEEccccCCCCC---------CCCCeeE
Q 025475 51 SRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDESFDA 118 (252)
Q Consensus 51 ~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~~~D~ 118 (252)
++||--|++.|. .+..|++.|. +|+.+|.+++..+...+ ..+++..+++|+.+.... .-+..|+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAK---ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHT---TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468888887763 6677777786 89999999876654433 335678899999875311 1257899
Q ss_pred EEeccc
Q 025475 119 VIDKGT 124 (252)
Q Consensus 119 v~~~~~ 124 (252)
++.+..
T Consensus 79 LVNNAG 84 (247)
T 3ged_A 79 LVNNAC 84 (247)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998764
No 497
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=78.33 E-value=7.3 Score=30.67 Aligned_cols=74 Identities=19% Similarity=0.237 Sum_probs=49.9
Q ss_pred CCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC---CCCCeEEEccccCCCCC---------CCC
Q 025475 50 SSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSFF---------EDE 114 (252)
Q Consensus 50 ~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~---~~~v~~~~~d~~~~~~~---------~~~ 114 (252)
++++|-.|++.| .++..+++.|. +|++++.++..++...+.+.. ..++.++.+|+.+.... ..+
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 457888888665 35566666776 899999998766655444321 24678889998875311 113
Q ss_pred CeeEEEeccc
Q 025475 115 SFDAVIDKGT 124 (252)
Q Consensus 115 ~~D~v~~~~~ 124 (252)
..|+++.+..
T Consensus 92 ~id~lv~nAg 101 (267)
T 1iy8_A 92 RIDGFFNNAG 101 (267)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998754
No 498
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=78.12 E-value=3.8 Score=32.83 Aligned_cols=74 Identities=12% Similarity=0.154 Sum_probs=52.2
Q ss_pred CCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCC---------CCCCe
Q 025475 50 SSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFF---------EDESF 116 (252)
Q Consensus 50 ~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~---------~~~~~ 116 (252)
+.++|-.|++.|. ++..+++.|. +|++++.++..++.....+.. ..++.++.+|+.+.... .-+..
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL 86 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5578888887653 5666677776 899999999887777666643 34688888998875311 11468
Q ss_pred eEEEeccc
Q 025475 117 DAVIDKGT 124 (252)
Q Consensus 117 D~v~~~~~ 124 (252)
|+++.+..
T Consensus 87 D~lvnnAg 94 (280)
T 3tox_A 87 DTAFNNAG 94 (280)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998754
No 499
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=78.05 E-value=7.7 Score=30.17 Aligned_cols=75 Identities=11% Similarity=0.201 Sum_probs=50.8
Q ss_pred CCcEEEEcccCc---HhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCCeEEEccccCCCCCC---------CCCe
Q 025475 50 SSRVLMVGCGNA---LMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFFE---------DESF 116 (252)
Q Consensus 50 ~~~vLD~G~G~G---~~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~-~~~v~~~~~d~~~~~~~~---------~~~~ 116 (252)
++++|-.|++.| .++..+++.|. +|++++.+++.++...+.+.. ..++.++.+|+.+..... -+..
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457888888655 25566666776 899999998776665554432 236788899998753110 1468
Q ss_pred eEEEeccch
Q 025475 117 DAVIDKGTL 125 (252)
Q Consensus 117 D~v~~~~~l 125 (252)
|+++.+...
T Consensus 86 d~lv~nAg~ 94 (247)
T 2jah_A 86 DILVNNAGI 94 (247)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999987553
No 500
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=77.96 E-value=7.6 Score=30.57 Aligned_cols=76 Identities=9% Similarity=0.061 Sum_probs=52.7
Q ss_pred CCCcEEEEcccCcH---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC---CCCCeEEEccccCCCCC---------CC
Q 025475 49 TSSRVLMVGCGNAL---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSFF---------ED 113 (252)
Q Consensus 49 ~~~~vLD~G~G~G~---~~~~l~~~~~~~v~~vD~s~~~i~~a~~~~~~---~~~v~~~~~d~~~~~~~---------~~ 113 (252)
.+.++|-.|++.|. ++..+++.|. +|+.++.+++.++...+.+.. ..++.++.+|+.+.... .-
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 35678888887653 5666777776 899999998877766665532 12478889999875311 12
Q ss_pred CCeeEEEeccch
Q 025475 114 ESFDAVIDKGTL 125 (252)
Q Consensus 114 ~~~D~v~~~~~l 125 (252)
+..|+++.+...
T Consensus 86 g~id~lvnnAg~ 97 (265)
T 3lf2_A 86 GCASILVNNAGQ 97 (265)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987654
Done!