Query 025476
Match_columns 252
No_of_seqs 139 out of 1275
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 11:06:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025476.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025476hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pym_A GAPDH 3, glyceraldehyde 100.0 1.2E-88 4.2E-93 622.1 25.0 237 4-242 2-238 (332)
2 3v1y_O PP38, glyceraldehyde-3- 100.0 4.6E-88 1.6E-92 619.4 22.4 241 1-242 1-242 (337)
3 3lvf_P GAPDH 1, glyceraldehyde 100.0 1.4E-87 4.8E-92 615.9 22.0 238 2-242 3-242 (338)
4 3ids_C GAPDH, glyceraldehyde-3 100.0 2.5E-87 8.5E-92 618.0 21.7 239 2-242 1-255 (359)
5 3doc_A Glyceraldehyde 3-phosph 100.0 6.5E-87 2.2E-91 611.4 24.0 237 1-242 1-240 (335)
6 3h9e_O Glyceraldehyde-3-phosph 100.0 1.4E-86 4.9E-91 611.3 24.8 237 3-242 7-244 (346)
7 4dib_A GAPDH, glyceraldehyde 3 100.0 7.7E-87 2.6E-91 611.9 22.3 235 4-242 5-241 (345)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 7.3E-84 2.5E-88 594.4 18.7 236 2-242 20-261 (356)
9 2b4r_O Glyceraldehyde-3-phosph 100.0 8.3E-82 2.8E-86 580.7 22.3 240 1-242 9-251 (345)
10 1obf_O Glyceraldehyde 3-phosph 100.0 7.6E-81 2.6E-85 573.0 24.4 235 4-242 2-241 (335)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 2.3E-81 7.9E-86 577.6 19.4 236 3-242 2-239 (342)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 1.1E-73 3.6E-78 526.1 21.8 235 4-243 1-237 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 8.1E-73 2.8E-77 527.6 23.0 238 1-243 1-243 (380)
14 3b1j_A Glyceraldehyde 3-phosph 100.0 2.1E-71 7.2E-76 512.5 24.6 238 1-243 1-243 (339)
15 1rm4_O Glyceraldehyde 3-phosph 100.0 2.9E-71 9.9E-76 510.8 22.8 236 4-243 2-241 (337)
16 3cmc_O GAPDH, glyceraldehyde-3 100.0 1.7E-70 6E-75 505.5 23.0 236 4-243 2-239 (334)
17 3cps_A Glyceraldehyde 3-phosph 100.0 1.2E-70 4.1E-75 509.5 21.8 240 2-243 16-259 (354)
18 3e5r_O PP38, glyceraldehyde-3- 100.0 5.8E-70 2E-74 502.6 23.1 242 1-243 1-243 (337)
19 1u8f_O GAPDH, glyceraldehyde-3 100.0 1E-69 3.5E-74 500.6 21.7 241 1-243 1-241 (335)
20 1hdg_O Holo-D-glyceraldehyde-3 100.0 2.3E-69 8E-74 497.6 22.2 236 4-243 1-239 (332)
21 2x5j_O E4PDH, D-erythrose-4-ph 100.0 4.9E-69 1.7E-73 496.8 21.9 238 1-243 1-243 (339)
22 1gad_O D-glyceraldehyde-3-phos 100.0 1.4E-68 4.7E-73 492.2 21.2 236 4-243 2-238 (330)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 1.2E-55 4.3E-60 407.9 11.1 213 1-243 1-226 (343)
24 2yv3_A Aspartate-semialdehyde 100.0 2.4E-43 8.3E-48 324.2 12.9 206 4-243 1-238 (331)
25 2r00_A Aspartate-semialdehyde 100.0 9.9E-42 3.4E-46 314.0 18.1 210 1-243 1-244 (336)
26 1cf2_P Protein (glyceraldehyde 100.0 2E-42 6.9E-47 318.8 8.4 208 4-243 2-219 (337)
27 2hjs_A USG-1 protein homolog; 100.0 6.7E-41 2.3E-45 309.0 12.5 211 2-243 5-246 (340)
28 2czc_A Glyceraldehyde-3-phosph 100.0 2.4E-41 8.3E-46 310.8 9.0 208 1-243 1-217 (334)
29 1b7g_O Protein (glyceraldehyde 100.0 1.1E-39 3.7E-44 300.9 10.5 205 4-249 2-226 (340)
30 1t4b_A Aspartate-semialdehyde 100.0 4.2E-40 1.4E-44 306.6 6.1 213 4-244 2-275 (367)
31 2ep5_A 350AA long hypothetical 100.0 4.6E-37 1.6E-41 284.2 9.1 215 1-243 1-244 (350)
32 1ys4_A Aspartate-semialdehyde 100.0 4.4E-35 1.5E-39 271.1 9.7 216 1-243 6-250 (354)
33 1xyg_A Putative N-acetyl-gamma 100.0 1.6E-34 5.3E-39 268.3 8.0 205 1-244 14-256 (359)
34 2ozp_A N-acetyl-gamma-glutamyl 100.0 1.5E-33 5.2E-38 260.3 10.1 204 1-244 1-238 (345)
35 4dpk_A Malonyl-COA/succinyl-CO 100.0 1E-31 3.6E-36 249.4 8.8 214 3-243 7-248 (359)
36 4dpl_A Malonyl-COA/succinyl-CO 100.0 1E-31 3.6E-36 249.4 7.5 214 3-243 7-248 (359)
37 3pwk_A Aspartate-semialdehyde 100.0 2E-30 6.8E-35 241.2 15.8 209 2-243 1-252 (366)
38 3uw3_A Aspartate-semialdehyde 100.0 2.4E-31 8.2E-36 248.2 7.4 210 3-243 4-282 (377)
39 3pzr_A Aspartate-semialdehyde 100.0 2.5E-31 8.7E-36 247.5 7.5 209 4-243 1-274 (370)
40 3tz6_A Aspartate-semialdehyde 100.0 9.5E-30 3.2E-34 235.0 17.2 207 4-243 2-255 (344)
41 3hsk_A Aspartate-semialdehyde 100.0 1.5E-29 5.1E-34 236.5 9.5 215 1-243 17-272 (381)
42 2nqt_A N-acetyl-gamma-glutamyl 99.9 3.1E-28 1.1E-32 225.5 9.9 215 1-244 7-251 (352)
43 3dr3_A N-acetyl-gamma-glutamyl 99.9 5.9E-28 2E-32 222.4 4.4 205 4-243 5-242 (337)
44 1vkn_A N-acetyl-gamma-glutamyl 99.9 5.7E-23 2E-27 190.0 4.3 202 4-243 14-249 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.5 2.2E-07 7.6E-12 84.2 8.7 154 1-184 1-163 (312)
46 1f06_A MESO-diaminopimelate D- 98.2 2.1E-06 7E-11 77.7 7.9 90 1-126 1-90 (320)
47 3bio_A Oxidoreductase, GFO/IDH 98.1 3.4E-06 1.1E-10 75.7 7.0 91 1-126 7-97 (304)
48 3gdo_A Uncharacterized oxidore 98.0 1.3E-05 4.6E-10 73.0 7.5 93 2-126 4-97 (358)
49 4hkt_A Inositol 2-dehydrogenas 97.9 1.6E-05 5.5E-10 71.3 6.6 94 2-126 2-95 (331)
50 3db2_A Putative NADPH-dependen 97.9 1.8E-05 6.1E-10 71.8 6.8 95 2-126 4-98 (354)
51 3ezy_A Dehydrogenase; structur 97.9 1.4E-05 4.7E-10 72.2 6.0 96 1-126 1-96 (344)
52 3ec7_A Putative dehydrogenase; 97.9 1.5E-05 5.2E-10 72.6 6.2 98 1-126 21-119 (357)
53 3fhl_A Putative oxidoreductase 97.9 2.1E-05 7.3E-10 71.6 7.2 93 2-126 4-97 (362)
54 3kux_A Putative oxidoreductase 97.9 2.6E-05 8.9E-10 70.7 7.6 94 1-126 4-99 (352)
55 3e18_A Oxidoreductase; dehydro 97.8 2.8E-05 9.6E-10 70.9 6.9 95 1-126 3-97 (359)
56 4ew6_A D-galactose-1-dehydroge 97.8 1.7E-05 5.8E-10 71.7 5.3 89 1-126 23-113 (330)
57 3evn_A Oxidoreductase, GFO/IDH 97.8 2.6E-05 9.1E-10 70.0 6.6 96 2-126 4-99 (329)
58 3e9m_A Oxidoreductase, GFO/IDH 97.8 1.9E-05 6.3E-10 71.1 5.5 97 1-126 3-99 (330)
59 3i23_A Oxidoreductase, GFO/IDH 97.8 3.3E-05 1.1E-09 70.1 7.0 96 1-126 1-97 (349)
60 3mz0_A Inositol 2-dehydrogenas 97.8 5.5E-05 1.9E-09 68.2 7.8 97 1-126 1-98 (344)
61 4h3v_A Oxidoreductase domain p 97.8 1.2E-05 4E-10 72.8 3.3 97 1-126 4-107 (390)
62 3ing_A Homoserine dehydrogenas 97.7 4.5E-05 1.5E-09 69.4 7.0 37 1-37 2-44 (325)
63 2ixa_A Alpha-N-acetylgalactosa 97.7 4.6E-05 1.6E-09 71.5 7.0 103 1-126 18-123 (444)
64 3qy9_A DHPR, dihydrodipicolina 97.7 3.2E-05 1.1E-09 67.7 5.4 35 1-36 1-35 (243)
65 3euw_A MYO-inositol dehydrogen 97.7 4.1E-05 1.4E-09 69.0 6.3 96 1-126 1-97 (344)
66 3ohs_X Trans-1,2-dihydrobenzen 97.7 4.1E-05 1.4E-09 68.8 6.2 96 1-126 1-98 (334)
67 3rc1_A Sugar 3-ketoreductase; 97.7 4.5E-05 1.5E-09 69.3 6.0 96 1-126 25-121 (350)
68 3f4l_A Putative oxidoreductase 97.7 7E-05 2.4E-09 67.7 7.0 95 1-126 1-97 (345)
69 2ejw_A HDH, homoserine dehydro 97.7 8.4E-05 2.9E-09 67.8 7.4 88 1-125 1-97 (332)
70 3e82_A Putative oxidoreductase 97.6 6.6E-05 2.3E-09 68.6 6.6 92 3-126 7-99 (364)
71 3m2t_A Probable dehydrogenase; 97.6 5.4E-05 1.8E-09 69.0 5.9 97 1-126 3-100 (359)
72 4fb5_A Probable oxidoreductase 97.6 5.5E-05 1.9E-09 68.4 5.9 97 1-126 23-126 (393)
73 3uuw_A Putative oxidoreductase 97.6 7.9E-05 2.7E-09 66.1 6.6 94 1-126 4-98 (308)
74 4had_A Probable oxidoreductase 97.6 7.2E-05 2.5E-09 67.4 6.1 95 3-126 23-118 (350)
75 3cea_A MYO-inositol 2-dehydrog 97.6 0.00012 4.2E-09 65.6 7.6 95 3-126 8-103 (346)
76 1tlt_A Putative oxidoreductase 97.6 4E-05 1.4E-09 68.4 4.2 92 3-126 5-97 (319)
77 1ydw_A AX110P-like protein; st 97.6 8.8E-05 3E-09 67.4 6.3 98 3-126 6-103 (362)
78 3q2i_A Dehydrogenase; rossmann 97.6 8.1E-05 2.8E-09 67.4 5.8 94 3-126 13-107 (354)
79 3c1a_A Putative oxidoreductase 97.6 8.4E-05 2.9E-09 66.2 5.8 92 3-126 10-101 (315)
80 3c8m_A Homoserine dehydrogenas 97.6 2.5E-05 8.6E-10 71.1 2.3 105 1-125 3-120 (331)
81 4gqa_A NAD binding oxidoreduct 97.5 5E-05 1.7E-09 70.2 4.4 95 3-126 26-128 (412)
82 1h6d_A Precursor form of gluco 97.5 0.00011 3.9E-09 68.8 6.4 101 1-126 81-182 (433)
83 4f3y_A DHPR, dihydrodipicolina 97.5 1.9E-05 6.6E-10 70.2 0.9 142 1-171 5-149 (272)
84 1lc0_A Biliverdin reductase A; 97.5 0.00012 4.1E-09 65.0 6.0 88 3-126 7-97 (294)
85 3mtj_A Homoserine dehydrogenas 97.4 0.00021 7.2E-09 67.7 6.7 94 1-126 7-111 (444)
86 2ho3_A Oxidoreductase, GFO/IDH 97.4 0.0002 6.8E-09 63.9 6.2 93 4-126 2-94 (325)
87 3ijp_A DHPR, dihydrodipicolina 97.4 3.2E-05 1.1E-09 69.4 0.9 96 3-123 21-117 (288)
88 3moi_A Probable dehydrogenase; 97.4 0.00013 4.6E-09 67.0 4.8 95 2-126 1-96 (387)
89 2dc1_A L-aspartate dehydrogena 97.4 0.00033 1.1E-08 60.0 6.9 134 4-183 1-136 (236)
90 1zh8_A Oxidoreductase; TM0312, 97.3 0.00028 9.4E-09 63.7 6.2 95 3-126 18-114 (340)
91 3do5_A HOM, homoserine dehydro 97.3 0.00039 1.3E-08 63.2 7.1 100 4-125 3-114 (327)
92 1xea_A Oxidoreductase, GFO/IDH 97.3 0.00042 1.4E-08 61.9 7.1 94 1-126 1-95 (323)
93 1dih_A Dihydrodipicolinate red 97.3 0.00014 4.7E-09 64.5 3.7 101 1-126 3-104 (273)
94 3upl_A Oxidoreductase; rossman 97.3 0.00024 8.3E-09 67.3 5.5 107 2-118 22-133 (446)
95 3dty_A Oxidoreductase, GFO/IDH 97.2 0.00031 1.1E-08 64.7 5.7 104 1-126 10-117 (398)
96 3v5n_A Oxidoreductase; structu 97.2 0.00034 1.1E-08 65.1 5.8 99 1-126 35-142 (417)
97 1p9l_A Dihydrodipicolinate red 97.2 0.0012 4E-08 57.8 8.7 33 4-36 1-34 (245)
98 3u3x_A Oxidoreductase; structu 97.2 0.00025 8.5E-09 64.7 4.4 96 1-126 23-120 (361)
99 3o9z_A Lipopolysaccaride biosy 97.1 0.00064 2.2E-08 60.8 6.6 93 4-126 4-104 (312)
100 3ip3_A Oxidoreductase, putativ 97.1 0.00011 3.8E-09 66.1 1.1 97 1-126 1-99 (337)
101 3oa2_A WBPB; oxidoreductase, s 97.1 0.00082 2.8E-08 60.3 6.6 93 4-126 4-105 (318)
102 2nvw_A Galactose/lactose metab 97.0 0.00045 1.5E-08 65.7 4.5 99 2-126 38-146 (479)
103 2p2s_A Putative oxidoreductase 97.0 0.00087 3E-08 60.0 6.0 96 1-126 2-98 (336)
104 3btv_A Galactose/lactose metab 97.0 0.00032 1.1E-08 65.7 3.2 98 3-126 20-127 (438)
105 3ic5_A Putative saccharopine d 97.0 0.00029 9.9E-09 52.5 2.3 96 3-124 5-100 (118)
106 2glx_A 1,5-anhydro-D-fructose 96.9 0.001 3.5E-08 59.2 6.0 93 4-126 1-94 (332)
107 1j5p_A Aspartate dehydrogenase 96.9 0.0014 4.7E-08 57.7 6.0 131 4-185 13-148 (253)
108 2dt5_A AT-rich DNA-binding pro 96.8 0.0018 6.2E-08 55.3 5.8 93 3-126 80-173 (211)
109 3oqb_A Oxidoreductase; structu 96.6 0.0012 4.2E-08 60.1 4.1 97 1-126 4-115 (383)
110 2vt3_A REX, redox-sensing tran 96.5 0.0047 1.6E-07 52.9 6.8 94 3-127 85-179 (215)
111 1r0k_A 1-deoxy-D-xylulose 5-ph 96.1 0.0039 1.3E-07 58.0 4.3 109 4-123 5-122 (388)
112 3keo_A Redox-sensing transcrip 96.1 0.0041 1.4E-07 53.3 3.8 96 3-126 84-181 (212)
113 3ius_A Uncharacterized conserv 95.6 0.073 2.5E-06 45.4 10.1 33 2-35 4-36 (286)
114 3abi_A Putative uncharacterize 95.3 0.0065 2.2E-07 55.2 2.2 93 3-126 16-108 (365)
115 2nu8_A Succinyl-COA ligase [AD 95.2 0.028 9.7E-07 49.8 6.1 87 3-123 7-94 (288)
116 4gmf_A Yersiniabactin biosynth 95.1 0.024 8.3E-07 52.1 5.6 136 3-172 7-177 (372)
117 3a06_A 1-deoxy-D-xylulose 5-ph 95.1 0.077 2.6E-06 49.0 8.7 112 1-124 1-115 (376)
118 3gpi_A NAD-dependent epimerase 95.0 0.034 1.2E-06 47.7 6.0 34 1-35 1-34 (286)
119 1y81_A Conserved hypothetical 94.8 0.1 3.5E-06 41.1 7.7 85 3-126 14-102 (138)
120 4huj_A Uncharacterized protein 94.6 0.022 7.4E-07 48.0 3.6 35 1-36 21-55 (220)
121 1ebf_A Homoserine dehydrogenas 94.5 0.031 1.1E-06 51.1 4.5 35 2-36 3-40 (358)
122 3dqp_A Oxidoreductase YLBE; al 93.6 0.25 8.5E-06 40.5 8.1 31 4-35 1-32 (219)
123 2duw_A Putative COA-binding pr 93.5 0.3 1E-05 38.6 8.0 85 4-125 14-102 (145)
124 1iuk_A Hypothetical protein TT 93.4 0.12 4.2E-06 40.7 5.5 86 4-126 14-103 (140)
125 3dhn_A NAD-dependent epimerase 93.3 0.13 4.3E-06 42.3 5.8 31 4-35 5-36 (227)
126 3qvo_A NMRA family protein; st 93.1 0.13 4.3E-06 43.1 5.5 34 1-34 21-55 (236)
127 3d0o_A L-LDH 1, L-lactate dehy 92.9 0.14 4.9E-06 45.7 5.8 35 2-36 5-39 (317)
128 1qyd_A Pinoresinol-lariciresin 92.9 0.055 1.9E-06 46.8 3.0 32 3-35 4-36 (313)
129 2d59_A Hypothetical protein PH 92.8 0.4 1.4E-05 37.8 7.8 83 4-125 23-109 (144)
130 3evt_A Phosphoglycerate dehydr 92.6 0.17 5.7E-06 45.7 5.9 31 4-35 138-168 (324)
131 1id1_A Putative potassium chan 92.6 0.13 4.6E-06 40.2 4.7 34 1-35 1-34 (153)
132 3ew7_A LMO0794 protein; Q8Y8U8 92.5 0.49 1.7E-05 38.3 8.2 31 4-35 1-32 (221)
133 3e8x_A Putative NAD-dependent 92.4 0.85 2.9E-05 37.7 9.7 33 2-35 20-53 (236)
134 3ggo_A Prephenate dehydrogenas 92.2 0.15 5E-06 45.5 4.9 33 2-36 32-66 (314)
135 2ew2_A 2-dehydropantoate 2-red 92.2 0.13 4.5E-06 44.4 4.6 33 1-34 1-33 (316)
136 3e48_A Putative nucleoside-dip 92.1 0.14 4.7E-06 43.8 4.5 32 4-35 1-33 (289)
137 3hg7_A D-isomer specific 2-hyd 92.0 0.2 6.8E-06 45.2 5.6 31 4-35 141-171 (324)
138 3fwz_A Inner membrane protein 91.9 0.17 5.8E-06 39.2 4.4 32 3-35 7-38 (140)
139 3llv_A Exopolyphosphatase-rela 91.9 0.17 5.8E-06 38.8 4.4 31 4-35 7-37 (141)
140 3gt0_A Pyrroline-5-carboxylate 91.7 0.15 5.1E-06 43.4 4.2 25 1-26 1-25 (247)
141 3b1f_A Putative prephenate deh 91.7 0.13 4.6E-06 44.5 4.0 35 1-36 4-39 (290)
142 1bg6_A N-(1-D-carboxylethyl)-L 91.7 0.16 5.6E-06 44.9 4.6 32 1-33 1-33 (359)
143 4e21_A 6-phosphogluconate dehy 91.6 0.16 5.6E-06 46.3 4.6 37 3-43 22-58 (358)
144 3ff4_A Uncharacterized protein 91.6 0.56 1.9E-05 36.2 7.1 83 4-126 5-91 (122)
145 3c24_A Putative oxidoreductase 91.6 0.18 6.3E-06 43.7 4.7 29 4-33 12-41 (286)
146 2bma_A Glutamate dehydrogenase 91.4 0.33 1.1E-05 46.1 6.6 141 4-166 253-403 (470)
147 1t2d_A LDH-P, L-lactate dehydr 91.3 0.13 4.5E-06 46.1 3.6 35 1-36 1-36 (322)
148 4g2n_A D-isomer specific 2-hyd 91.2 0.19 6.6E-06 45.7 4.7 30 4-34 174-203 (345)
149 2x0j_A Malate dehydrogenase; o 91.2 0.26 8.8E-06 43.9 5.4 33 4-36 1-33 (294)
150 3pp8_A Glyoxylate/hydroxypyruv 91.2 0.18 6.1E-06 45.3 4.3 30 4-34 140-169 (315)
151 2pi1_A D-lactate dehydrogenase 91.1 0.19 6.5E-06 45.4 4.6 30 4-34 142-171 (334)
152 1vpd_A Tartronate semialdehyde 91.1 0.19 6.6E-06 43.5 4.4 32 3-36 5-36 (299)
153 4ina_A Saccharopine dehydrogen 91.1 0.073 2.5E-06 49.2 1.7 151 4-177 2-167 (405)
154 2rcy_A Pyrroline carboxylate r 91.1 0.16 5.4E-06 43.2 3.7 26 1-26 2-27 (262)
155 1lss_A TRK system potassium up 91.0 0.27 9.2E-06 37.0 4.7 31 3-34 4-34 (140)
156 1qp8_A Formate dehydrogenase; 90.9 0.24 8.1E-06 44.1 4.9 30 4-34 125-154 (303)
157 3tri_A Pyrroline-5-carboxylate 90.8 0.2 6.7E-06 43.8 4.2 26 1-26 1-26 (280)
158 4e12_A Diketoreductase; oxidor 90.8 0.26 8.8E-06 42.9 4.9 39 1-43 1-40 (283)
159 1xdw_A NAD+-dependent (R)-2-hy 90.7 0.22 7.6E-06 44.8 4.6 30 4-34 147-176 (331)
160 3ego_A Probable 2-dehydropanto 90.7 0.69 2.4E-05 40.7 7.7 31 2-34 1-31 (307)
161 1vm6_A DHPR, dihydrodipicolina 90.6 0.53 1.8E-05 40.6 6.6 67 4-120 13-80 (228)
162 3cky_A 2-hydroxymethyl glutara 90.5 0.25 8.7E-06 42.8 4.6 32 3-36 4-35 (301)
163 1dxy_A D-2-hydroxyisocaproate 90.5 0.24 8.3E-06 44.6 4.6 30 4-34 146-175 (333)
164 3gg9_A D-3-phosphoglycerate de 90.4 0.28 9.5E-06 44.7 4.9 30 4-34 161-190 (352)
165 1mx3_A CTBP1, C-terminal bindi 90.4 0.29 9.9E-06 44.5 5.0 30 4-34 169-198 (347)
166 2yq5_A D-isomer specific 2-hyd 90.3 0.25 8.6E-06 44.9 4.6 30 4-34 149-178 (343)
167 2g76_A 3-PGDH, D-3-phosphoglyc 90.3 0.3 1E-05 44.2 5.0 30 4-34 166-195 (335)
168 4dgs_A Dehydrogenase; structur 90.3 0.27 9.1E-06 44.7 4.7 29 4-33 172-200 (340)
169 1gdh_A D-glycerate dehydrogena 90.2 0.28 9.5E-06 43.9 4.7 30 4-34 147-176 (320)
170 3kb6_A D-lactate dehydrogenase 90.1 0.26 8.9E-06 44.5 4.5 29 4-33 142-170 (334)
171 3jtm_A Formate dehydrogenase, 90.1 0.24 8.4E-06 45.1 4.3 30 4-34 165-194 (351)
172 2cuk_A Glycerate dehydrogenase 90.1 0.31 1.1E-05 43.5 4.9 30 4-34 145-174 (311)
173 1lld_A L-lactate dehydrogenase 90.0 0.45 1.5E-05 41.7 5.8 30 4-33 8-38 (319)
174 2i76_A Hypothetical protein; N 89.9 0.067 2.3E-06 46.4 0.4 33 1-36 1-33 (276)
175 3gvx_A Glycerate dehydrogenase 89.9 0.26 8.8E-06 43.8 4.2 30 4-34 123-152 (290)
176 4e5n_A Thermostable phosphite 89.9 0.22 7.6E-06 44.9 3.8 30 4-34 146-175 (330)
177 3g0o_A 3-hydroxyisobutyrate de 89.9 0.31 1E-05 42.7 4.6 37 3-43 7-43 (303)
178 4hy3_A Phosphoglycerate oxidor 89.8 0.26 8.9E-06 45.2 4.3 30 4-34 177-206 (365)
179 1evy_A Glycerol-3-phosphate de 89.7 0.25 8.6E-06 44.3 4.0 33 1-34 12-45 (366)
180 1wwk_A Phosphoglycerate dehydr 89.7 0.35 1.2E-05 43.0 4.9 30 4-34 143-172 (307)
181 4ezb_A Uncharacterized conserv 89.5 0.38 1.3E-05 42.7 5.0 32 2-33 23-54 (317)
182 3qha_A Putative oxidoreductase 89.4 0.26 8.9E-06 43.1 3.8 30 3-33 15-44 (296)
183 1gtm_A Glutamate dehydrogenase 89.4 0.35 1.2E-05 45.1 4.9 33 4-37 213-246 (419)
184 2h78_A Hibadh, 3-hydroxyisobut 89.4 0.35 1.2E-05 42.1 4.7 36 4-43 4-39 (302)
185 1j4a_A D-LDH, D-lactate dehydr 89.4 0.33 1.1E-05 43.7 4.6 30 4-34 147-176 (333)
186 1sc6_A PGDH, D-3-phosphoglycer 89.4 0.32 1.1E-05 45.1 4.6 30 4-34 146-175 (404)
187 2vns_A Metalloreductase steap3 89.3 0.33 1.1E-05 40.5 4.2 31 3-34 28-58 (215)
188 2ekl_A D-3-phosphoglycerate de 89.3 0.35 1.2E-05 43.2 4.6 30 4-34 143-172 (313)
189 3p7m_A Malate dehydrogenase; p 89.2 0.21 7.3E-06 44.8 3.1 35 1-36 3-37 (321)
190 3d1l_A Putative NADP oxidoredu 89.2 0.27 9.1E-06 42.0 3.6 32 4-36 11-42 (266)
191 3dtt_A NADP oxidoreductase; st 89.2 0.41 1.4E-05 40.7 4.8 32 2-34 18-49 (245)
192 4gbj_A 6-phosphogluconate dehy 89.0 0.34 1.2E-05 42.8 4.3 32 2-34 4-35 (297)
193 1oi7_A Succinyl-COA synthetase 89.0 0.41 1.4E-05 42.3 4.8 87 3-123 7-94 (288)
194 3l6d_A Putative oxidoreductase 89.0 0.35 1.2E-05 42.5 4.4 37 3-43 9-45 (306)
195 3doj_A AT3G25530, dehydrogenas 89.0 0.4 1.4E-05 42.2 4.7 31 4-36 22-52 (310)
196 2o4c_A Erythronate-4-phosphate 89.0 0.36 1.2E-05 44.5 4.6 30 4-34 117-146 (380)
197 2w2k_A D-mandelate dehydrogena 88.9 0.39 1.3E-05 43.5 4.7 30 4-34 164-194 (348)
198 1ldn_A L-lactate dehydrogenase 88.9 0.26 8.7E-06 44.0 3.4 34 3-36 6-39 (316)
199 3oet_A Erythronate-4-phosphate 88.9 0.37 1.3E-05 44.5 4.6 30 4-34 120-149 (381)
200 3aog_A Glutamate dehydrogenase 88.8 0.9 3.1E-05 42.8 7.2 34 3-37 235-268 (440)
201 2gcg_A Glyoxylate reductase/hy 88.8 0.38 1.3E-05 43.1 4.5 30 4-34 156-185 (330)
202 3ba1_A HPPR, hydroxyphenylpyru 88.6 0.35 1.2E-05 43.6 4.2 29 4-33 165-193 (333)
203 2g1u_A Hypothetical protein TM 88.6 0.59 2E-05 36.5 5.0 30 4-34 20-49 (155)
204 2yv1_A Succinyl-COA ligase [AD 88.6 0.5 1.7E-05 41.9 5.1 86 4-123 14-100 (294)
205 3r3j_A Glutamate dehydrogenase 88.5 0.81 2.8E-05 43.3 6.7 139 4-164 240-388 (456)
206 2d0i_A Dehydrogenase; structur 88.5 0.42 1.4E-05 43.0 4.6 30 4-34 147-176 (333)
207 2dbq_A Glyoxylate reductase; D 88.5 0.47 1.6E-05 42.6 4.9 30 4-34 151-180 (334)
208 4dll_A 2-hydroxy-3-oxopropiona 88.4 0.47 1.6E-05 42.0 4.8 31 4-36 32-62 (320)
209 3l4b_C TRKA K+ channel protien 88.4 0.33 1.1E-05 40.2 3.6 31 4-35 1-31 (218)
210 3c85_A Putative glutathione-re 88.4 0.4 1.4E-05 38.4 3.9 32 3-35 39-71 (183)
211 1yb4_A Tartronic semialdehyde 88.3 0.35 1.2E-05 41.7 3.8 30 4-34 4-33 (295)
212 2g5c_A Prephenate dehydrogenas 88.3 0.49 1.7E-05 40.6 4.8 32 4-36 2-34 (281)
213 2nac_A NAD-dependent formate d 88.3 0.43 1.5E-05 44.2 4.6 30 4-34 192-221 (393)
214 1bgv_A Glutamate dehydrogenase 88.3 0.49 1.7E-05 44.7 5.0 140 4-166 231-382 (449)
215 3ghy_A Ketopantoate reductase 88.1 0.43 1.5E-05 42.5 4.3 33 1-34 1-33 (335)
216 3k92_A NAD-GDH, NAD-specific g 88.1 0.97 3.3E-05 42.3 6.8 34 3-37 221-254 (424)
217 2izz_A Pyrroline-5-carboxylate 88.0 0.41 1.4E-05 42.4 4.2 24 3-26 22-45 (322)
218 2iz1_A 6-phosphogluconate dehy 88.0 0.42 1.4E-05 45.0 4.4 33 1-34 3-35 (474)
219 2uyy_A N-PAC protein; long-cha 88.0 0.46 1.6E-05 41.6 4.4 30 3-33 30-59 (316)
220 2cvz_A Dehydrogenase, 3-hydrox 87.9 0.42 1.4E-05 41.0 4.0 28 4-33 2-29 (289)
221 3mw9_A GDH 1, glutamate dehydr 87.9 2.6 8.8E-05 40.3 9.7 32 4-36 245-276 (501)
222 2yv2_A Succinyl-COA synthetase 87.9 0.73 2.5E-05 40.8 5.7 87 3-123 13-101 (297)
223 2ahr_A Putative pyrroline carb 87.7 0.54 1.9E-05 39.8 4.6 31 4-36 4-34 (259)
224 3pdu_A 3-hydroxyisobutyrate de 87.5 0.37 1.3E-05 41.7 3.5 30 4-34 2-31 (287)
225 2hmt_A YUAA protein; RCK, KTN, 87.5 0.47 1.6E-05 35.7 3.7 30 4-34 7-36 (144)
226 3k5p_A D-3-phosphoglycerate de 87.3 0.52 1.8E-05 44.1 4.5 30 4-34 157-186 (416)
227 2wtb_A MFP2, fatty acid multif 87.3 0.69 2.4E-05 46.0 5.7 30 4-34 313-342 (725)
228 2b69_A UDP-glucuronate decarbo 87.1 2 6.8E-05 37.5 8.1 32 3-35 27-59 (343)
229 3gg2_A Sugar dehydrogenase, UD 87.0 0.57 2E-05 43.9 4.6 37 3-43 2-38 (450)
230 3nep_X Malate dehydrogenase; h 86.9 0.81 2.8E-05 40.9 5.4 33 4-36 1-33 (314)
231 3pef_A 6-phosphogluconate dehy 86.9 0.64 2.2E-05 40.2 4.6 31 4-36 2-32 (287)
232 1z82_A Glycerol-3-phosphate de 86.9 0.62 2.1E-05 41.3 4.6 32 2-34 13-44 (335)
233 3d4o_A Dipicolinate synthase s 86.9 0.64 2.2E-05 40.7 4.6 30 4-34 156-185 (293)
234 2j6i_A Formate dehydrogenase; 86.8 0.5 1.7E-05 43.1 4.0 30 4-34 165-195 (364)
235 1hdo_A Biliverdin IX beta redu 86.6 0.87 3E-05 36.2 5.0 34 1-35 1-35 (206)
236 3qsg_A NAD-binding phosphogluc 86.5 0.51 1.7E-05 41.7 3.8 32 3-36 24-56 (312)
237 3hwr_A 2-dehydropantoate 2-red 86.4 2.1 7.2E-05 37.7 7.9 30 3-33 19-48 (318)
238 2f1k_A Prephenate dehydrogenas 86.3 0.71 2.4E-05 39.5 4.6 31 4-36 1-31 (279)
239 3obb_A Probable 3-hydroxyisobu 86.2 0.72 2.4E-05 40.8 4.7 38 4-45 4-41 (300)
240 2rir_A Dipicolinate synthase, 86.2 0.73 2.5E-05 40.3 4.7 30 4-34 158-187 (300)
241 2o3j_A UDP-glucose 6-dehydroge 86.1 0.58 2E-05 44.1 4.2 33 2-34 8-41 (481)
242 2yfq_A Padgh, NAD-GDH, NAD-spe 86.1 0.81 2.8E-05 42.8 5.1 34 3-37 212-245 (421)
243 3tl2_A Malate dehydrogenase; c 86.1 0.34 1.2E-05 43.4 2.5 33 3-36 8-40 (315)
244 4gwg_A 6-phosphogluconate dehy 85.8 0.62 2.1E-05 44.3 4.3 33 1-34 2-34 (484)
245 3slg_A PBGP3 protein; structur 85.6 0.7 2.4E-05 40.8 4.3 35 1-35 22-57 (372)
246 2zyd_A 6-phosphogluconate dehy 85.5 0.66 2.2E-05 43.9 4.3 33 1-34 13-45 (480)
247 2q3e_A UDP-glucose 6-dehydroge 85.5 0.66 2.3E-05 43.5 4.2 34 1-34 2-37 (467)
248 1i36_A Conserved hypothetical 85.2 0.76 2.6E-05 38.9 4.2 31 4-36 1-31 (264)
249 4fcc_A Glutamate dehydrogenase 85.2 0.87 3E-05 43.0 4.9 100 4-120 236-345 (450)
250 1ur5_A Malate dehydrogenase; o 85.1 0.97 3.3E-05 40.0 5.0 34 1-36 1-34 (309)
251 1ygy_A PGDH, D-3-phosphoglycer 85.1 0.89 3E-05 43.5 5.0 32 4-37 143-174 (529)
252 1jay_A Coenzyme F420H2:NADP+ o 84.9 1 3.6E-05 36.6 4.8 30 4-34 1-31 (212)
253 2pv7_A T-protein [includes: ch 84.9 0.84 2.9E-05 39.9 4.4 29 4-33 22-51 (298)
254 3pqe_A L-LDH, L-lactate dehydr 84.9 0.73 2.5E-05 41.4 4.1 34 3-36 5-38 (326)
255 2gf2_A Hibadh, 3-hydroxyisobut 84.8 0.74 2.5E-05 39.6 4.0 29 4-33 1-29 (296)
256 2raf_A Putative dinucleotide-b 84.8 0.96 3.3E-05 37.5 4.6 27 4-31 20-46 (209)
257 1v9l_A Glutamate dehydrogenase 84.5 2.8 9.7E-05 39.1 8.0 33 4-37 211-243 (421)
258 2yjz_A Metalloreductase steap4 84.8 0.19 6.5E-06 41.8 0.0 30 2-32 18-47 (201)
259 3ldh_A Lactate dehydrogenase; 84.3 1.8 6E-05 39.1 6.3 33 4-36 22-54 (330)
260 3dfu_A Uncharacterized protein 84.2 0.43 1.5E-05 41.1 2.1 33 3-36 6-38 (232)
261 3m2p_A UDP-N-acetylglucosamine 83.9 1.1 3.9E-05 38.5 4.8 33 1-35 1-34 (311)
262 1ks9_A KPA reductase;, 2-dehyd 83.7 1.1 3.7E-05 38.1 4.6 30 4-34 1-30 (291)
263 3i83_A 2-dehydropantoate 2-red 83.5 1.1 3.8E-05 39.4 4.6 32 3-35 2-33 (320)
264 3c7a_A Octopine dehydrogenase; 83.4 1 3.4E-05 40.9 4.4 33 1-34 1-33 (404)
265 3aoe_E Glutamate dehydrogenase 83.0 1.8 6.1E-05 40.4 6.0 33 3-36 218-250 (419)
266 3nkl_A UDP-D-quinovosamine 4-d 82.8 1.6 5.5E-05 33.2 4.8 34 3-36 4-37 (141)
267 3oj0_A Glutr, glutamyl-tRNA re 82.7 0.54 1.8E-05 36.3 2.0 31 4-36 22-52 (144)
268 3two_A Mannitol dehydrogenase; 82.3 2.8 9.7E-05 37.0 6.9 128 5-168 179-308 (348)
269 3l9w_A Glutathione-regulated p 82.1 1.1 3.9E-05 41.4 4.3 36 4-43 5-40 (413)
270 1x0v_A GPD-C, GPDH-C, glycerol 82.0 0.72 2.5E-05 40.9 2.8 26 1-26 6-31 (354)
271 3d64_A Adenosylhomocysteinase; 81.4 1.4 4.7E-05 42.1 4.6 31 4-36 278-308 (494)
272 3dfz_A SIRC, precorrin-2 dehyd 81.4 4.2 0.00014 34.5 7.3 30 4-34 32-61 (223)
273 3hn2_A 2-dehydropantoate 2-red 81.0 1.2 4.2E-05 39.0 3.9 33 1-35 1-33 (312)
274 2hun_A 336AA long hypothetical 81.0 1.4 4.7E-05 38.1 4.2 35 1-35 1-37 (336)
275 1yqg_A Pyrroline-5-carboxylate 81.0 1.3 4.5E-05 37.3 4.0 32 4-36 1-32 (263)
276 3ktd_A Prephenate dehydrogenas 80.9 1.4 4.7E-05 39.8 4.3 30 4-34 9-38 (341)
277 1e6u_A GDP-fucose synthetase; 80.9 1.4 4.7E-05 37.9 4.1 33 1-34 1-34 (321)
278 1np3_A Ketol-acid reductoisome 80.9 1.4 4.6E-05 39.5 4.2 30 4-34 17-46 (338)
279 3g17_A Similar to 2-dehydropan 80.2 0.91 3.1E-05 39.5 2.8 31 1-33 1-31 (294)
280 3fpc_A NADP-dependent alcohol 79.6 3.4 0.00012 36.5 6.4 92 5-119 169-261 (352)
281 3i6i_A Putative leucoanthocyan 79.5 1.6 5.6E-05 38.2 4.2 34 1-35 8-42 (346)
282 1c1d_A L-phenylalanine dehydro 79.2 1.9 6.5E-05 39.3 4.7 31 4-36 176-206 (355)
283 1f0y_A HCDH, L-3-hydroxyacyl-C 79.1 2.2 7.5E-05 37.0 4.9 29 4-33 16-44 (302)
284 3h2s_A Putative NADH-flavin re 79.1 2.2 7.6E-05 34.4 4.7 31 4-35 1-32 (224)
285 1v8b_A Adenosylhomocysteinase; 79.0 1.4 4.8E-05 41.9 3.8 30 4-34 258-287 (479)
286 3zwc_A Peroxisomal bifunctiona 79.0 2.5 8.7E-05 42.2 5.8 145 4-171 317-486 (742)
287 4g65_A TRK system potassium up 78.8 1.4 4.7E-05 41.4 3.7 37 3-43 3-39 (461)
288 1txg_A Glycerol-3-phosphate de 78.6 1.6 5.6E-05 38.0 3.9 30 4-34 1-30 (335)
289 4b4o_A Epimerase family protei 78.5 2.2 7.6E-05 36.4 4.7 30 4-34 1-31 (298)
290 3n58_A Adenosylhomocysteinase; 78.4 1.9 6.6E-05 40.8 4.5 29 4-33 248-276 (464)
291 3h9u_A Adenosylhomocysteinase; 78.3 2 6.7E-05 40.4 4.5 31 4-36 212-242 (436)
292 3eag_A UDP-N-acetylmuramate:L- 78.1 6.5 0.00022 34.7 7.8 90 4-124 5-95 (326)
293 1yqd_A Sinapyl alcohol dehydro 78.0 1.7 5.6E-05 39.0 3.8 30 5-35 190-219 (366)
294 3k96_A Glycerol-3-phosphate de 77.9 2.1 7.2E-05 38.7 4.5 30 3-33 29-58 (356)
295 2qyt_A 2-dehydropantoate 2-red 77.9 1.8 6.1E-05 37.3 3.9 31 4-34 9-44 (317)
296 3sc6_A DTDP-4-dehydrorhamnose 77.9 1.5 5.1E-05 37.1 3.3 33 2-35 4-37 (287)
297 1pgj_A 6PGDH, 6-PGDH, 6-phosph 77.5 1.8 6.2E-05 40.7 4.1 30 4-34 2-31 (478)
298 2p4q_A 6-phosphogluconate dehy 77.4 1.9 6.5E-05 40.9 4.2 32 2-34 9-40 (497)
299 2dpo_A L-gulonate 3-dehydrogen 77.3 2.2 7.4E-05 38.1 4.3 39 4-46 7-45 (319)
300 1xq6_A Unknown protein; struct 77.1 3.3 0.00011 33.8 5.2 35 1-35 2-38 (253)
301 2pgd_A 6-phosphogluconate dehy 77.1 1.9 6.7E-05 40.5 4.2 30 4-34 3-32 (482)
302 3ruf_A WBGU; rossmann fold, UD 76.9 2.2 7.7E-05 37.1 4.3 33 2-35 24-57 (351)
303 1mv8_A GMD, GDP-mannose 6-dehy 76.5 2.3 7.8E-05 39.3 4.4 36 4-43 1-36 (436)
304 2a35_A Hypothetical protein PA 76.2 2.4 8.3E-05 33.9 4.0 32 3-34 5-38 (215)
305 2hjr_A Malate dehydrogenase; m 75.8 3.6 0.00012 36.6 5.4 34 2-36 13-46 (328)
306 3vps_A TUNA, NAD-dependent epi 75.8 2.7 9.1E-05 35.8 4.4 32 3-35 7-39 (321)
307 3h5n_A MCCB protein; ubiquitin 75.7 3.4 0.00012 37.3 5.2 108 4-118 119-235 (353)
308 1leh_A Leucine dehydrogenase; 75.5 3.2 0.00011 37.9 5.0 35 4-42 174-208 (364)
309 1qyc_A Phenylcoumaran benzylic 75.4 2.5 8.7E-05 35.9 4.2 32 3-35 4-36 (308)
310 3h8v_A Ubiquitin-like modifier 75.3 0.58 2E-05 41.6 0.0 32 3-35 36-67 (292)
311 2d4a_B Malate dehydrogenase; a 75.2 1.2 4.3E-05 39.4 2.1 31 5-36 1-31 (308)
312 3r6d_A NAD-dependent epimerase 75.0 4 0.00014 33.1 5.1 31 4-35 5-38 (221)
313 3k5i_A Phosphoribosyl-aminoimi 74.7 3.8 0.00013 37.3 5.4 33 3-36 24-56 (403)
314 3q2o_A Phosphoribosylaminoimid 74.7 3.4 0.00012 37.1 5.0 30 4-34 15-44 (389)
315 3kkj_A Amine oxidase, flavin-c 74.5 3.1 0.00011 32.7 4.2 32 2-34 1-32 (336)
316 3jv7_A ADH-A; dehydrogenase, n 74.1 7 0.00024 34.3 6.8 129 5-168 174-310 (345)
317 3c1o_A Eugenol synthase; pheny 74.1 2.9 9.8E-05 35.9 4.2 31 4-35 5-36 (321)
318 3gvp_A Adenosylhomocysteinase 74.1 3 0.0001 39.2 4.5 31 4-36 221-251 (435)
319 3orq_A N5-carboxyaminoimidazol 74.0 3.6 0.00012 37.0 5.0 30 4-34 13-42 (377)
320 2fp4_A Succinyl-COA ligase [GD 74.0 3.4 0.00012 36.6 4.8 86 4-123 14-101 (305)
321 2r6j_A Eugenol synthase 1; phe 73.3 3.3 0.00011 35.6 4.4 31 4-35 12-43 (318)
322 4b8w_A GDP-L-fucose synthase; 72.9 2.8 9.7E-05 35.3 3.8 26 1-26 4-30 (319)
323 1ff9_A Saccharopine reductase; 72.9 3.7 0.00013 38.3 4.9 33 1-34 1-33 (450)
324 1zcj_A Peroxisomal bifunctiona 72.9 3.8 0.00013 38.2 5.0 32 3-36 37-68 (463)
325 1zej_A HBD-9, 3-hydroxyacyl-CO 72.8 3.7 0.00013 36.2 4.6 74 4-106 13-86 (293)
326 3g79_A NDP-N-acetyl-D-galactos 72.6 3.6 0.00012 38.9 4.8 32 3-34 18-50 (478)
327 2dq4_A L-threonine 3-dehydroge 72.5 8.9 0.0003 33.6 7.1 29 5-34 167-196 (343)
328 2i99_A MU-crystallin homolog; 72.4 3.2 0.00011 36.6 4.1 33 4-36 136-168 (312)
329 3gvi_A Malate dehydrogenase; N 71.8 4.1 0.00014 36.4 4.8 34 1-36 5-39 (324)
330 3pid_A UDP-glucose 6-dehydroge 71.8 3.9 0.00013 38.2 4.7 36 4-44 37-72 (432)
331 2ydy_A Methionine adenosyltran 71.6 4.3 0.00015 34.6 4.7 30 4-34 3-33 (315)
332 1yj8_A Glycerol-3-phosphate de 71.5 2.4 8.1E-05 38.1 3.1 22 4-25 22-43 (375)
333 1piw_A Hypothetical zinc-type 71.3 11 0.00039 33.2 7.6 29 5-34 182-210 (360)
334 2d5c_A AROE, shikimate 5-dehyd 71.2 3.6 0.00012 35.0 4.1 30 5-36 118-147 (263)
335 2c20_A UDP-glucose 4-epimerase 71.2 4.4 0.00015 34.7 4.7 31 4-35 2-33 (330)
336 2vhw_A Alanine dehydrogenase; 70.7 4.2 0.00014 36.9 4.6 30 4-34 169-198 (377)
337 2tmg_A Protein (glutamate dehy 70.6 5.2 0.00018 37.2 5.3 35 3-37 209-243 (415)
338 3mog_A Probable 3-hydroxybutyr 70.5 3.7 0.00013 38.8 4.3 39 4-46 6-44 (483)
339 2x4g_A Nucleoside-diphosphate- 70.0 5.1 0.00018 34.4 4.9 31 4-35 14-45 (342)
340 2axq_A Saccharopine dehydrogen 69.6 4.5 0.00015 38.0 4.7 31 4-34 24-54 (467)
341 1hyh_A L-hicdh, L-2-hydroxyiso 69.5 4.3 0.00015 35.4 4.3 32 4-36 2-34 (309)
342 1dlj_A UDP-glucose dehydrogena 69.1 4.1 0.00014 37.2 4.2 29 4-34 1-29 (402)
343 3goh_A Alcohol dehydrogenase, 68.8 4.3 0.00015 35.2 4.1 29 5-34 145-173 (315)
344 4g65_A TRK system potassium up 68.8 2.3 7.8E-05 39.9 2.4 94 4-124 236-332 (461)
345 2z1m_A GDP-D-mannose dehydrata 68.8 5.2 0.00018 34.3 4.6 34 1-35 1-35 (345)
346 3ce6_A Adenosylhomocysteinase; 68.8 4.5 0.00015 38.5 4.5 30 4-34 275-304 (494)
347 4egb_A DTDP-glucose 4,6-dehydr 68.7 4.2 0.00014 35.2 4.0 33 3-35 24-58 (346)
348 1orr_A CDP-tyvelose-2-epimeras 68.6 5.4 0.00019 34.3 4.7 30 4-34 2-32 (347)
349 2y0c_A BCEC, UDP-glucose dehyd 68.5 4.8 0.00016 37.8 4.6 31 3-34 8-38 (478)
350 2ewd_A Lactate dehydrogenase,; 68.3 5 0.00017 35.2 4.5 32 4-36 5-36 (317)
351 1ek6_A UDP-galactose 4-epimera 68.0 5.6 0.00019 34.3 4.7 32 1-34 1-33 (348)
352 3mwd_B ATP-citrate synthase; A 67.8 12 0.00041 33.7 6.9 35 3-37 10-47 (334)
353 2csu_A 457AA long hypothetical 67.7 13 0.00044 34.6 7.4 82 4-123 9-94 (457)
354 1t2a_A GDP-mannose 4,6 dehydra 67.5 5.9 0.0002 34.8 4.8 31 4-35 25-56 (375)
355 4ej6_A Putative zinc-binding d 67.4 7.8 0.00027 34.6 5.6 28 5-33 185-213 (370)
356 1gpj_A Glutamyl-tRNA reductase 67.3 4.2 0.00014 37.2 3.9 30 4-34 168-198 (404)
357 2yy7_A L-threonine dehydrogena 66.6 4 0.00014 34.6 3.4 34 1-35 1-36 (312)
358 1sb8_A WBPP; epimerase, 4-epim 66.5 5.4 0.00019 34.7 4.3 32 3-35 27-59 (352)
359 1y6j_A L-lactate dehydrogenase 66.5 6 0.0002 35.0 4.6 34 3-36 7-40 (318)
360 1x13_A NAD(P) transhydrogenase 66.0 5.7 0.0002 36.4 4.5 31 4-36 173-203 (401)
361 2ph5_A Homospermidine synthase 65.9 3.9 0.00013 38.8 3.4 92 4-126 14-114 (480)
362 3fi9_A Malate dehydrogenase; s 65.8 6 0.0002 35.7 4.5 35 1-36 6-42 (343)
363 3ay3_A NAD-dependent epimerase 65.7 2.5 8.5E-05 35.4 1.9 32 1-34 1-33 (267)
364 1omo_A Alanine dehydrogenase; 65.5 5.4 0.00018 35.4 4.1 38 4-43 126-163 (322)
365 3ouz_A Biotin carboxylase; str 65.3 5 0.00017 36.7 4.0 33 1-34 4-36 (446)
366 4dvj_A Putative zinc-dependent 65.3 3.5 0.00012 36.9 2.8 91 5-119 174-265 (363)
367 2hk9_A Shikimate dehydrogenase 65.2 5.3 0.00018 34.4 3.9 30 4-34 130-159 (275)
368 1uuf_A YAHK, zinc-type alcohol 64.9 4.5 0.00015 36.2 3.5 29 5-34 197-225 (369)
369 1oc2_A DTDP-glucose 4,6-dehydr 64.7 6 0.0002 34.2 4.2 32 4-35 5-38 (348)
370 2wm3_A NMRA-like family domain 64.2 6.3 0.00021 33.4 4.2 33 3-35 5-38 (299)
371 1xa0_A Putative NADPH dependen 64.2 13 0.00043 32.3 6.3 31 5-36 152-183 (328)
372 2aef_A Calcium-gated potassium 64.2 3.9 0.00014 33.8 2.8 30 3-34 9-38 (234)
373 1l7d_A Nicotinamide nucleotide 64.1 6.6 0.00022 35.6 4.5 31 4-36 173-203 (384)
374 3k6j_A Protein F01G10.3, confi 64.1 7.3 0.00025 36.7 4.9 31 4-36 55-85 (460)
375 3sxp_A ADP-L-glycero-D-mannohe 64.0 8.1 0.00028 33.8 5.0 32 3-35 10-44 (362)
376 2jv8_A Uncharacterized protein 63.9 4.2 0.00014 27.5 2.3 30 59-90 11-40 (73)
377 3lk7_A UDP-N-acetylmuramoylala 63.7 21 0.00073 32.8 8.0 86 4-118 10-97 (451)
378 3p2y_A Alanine dehydrogenase/p 63.5 5.4 0.00018 36.7 3.8 31 4-36 185-215 (381)
379 3ip1_A Alcohol dehydrogenase, 63.5 12 0.00042 33.6 6.3 29 5-34 216-245 (404)
380 1a5z_A L-lactate dehydrogenase 63.4 5.7 0.00019 35.0 3.9 32 4-36 1-33 (319)
381 3uog_A Alcohol dehydrogenase; 63.1 5.1 0.00018 35.6 3.5 129 5-169 192-329 (363)
382 3st7_A Capsular polysaccharide 63.0 5.4 0.00019 35.1 3.7 43 4-47 1-44 (369)
383 2z2v_A Hypothetical protein PH 62.9 7 0.00024 35.3 4.4 93 3-126 16-108 (365)
384 3m6i_A L-arabinitol 4-dehydrog 62.8 3.7 0.00013 36.4 2.5 29 5-34 182-211 (363)
385 2r85_A PURP protein PF1517; AT 62.7 7.3 0.00025 33.5 4.4 31 3-35 2-32 (334)
386 1n7h_A GDP-D-mannose-4,6-dehyd 62.3 8.4 0.00029 33.9 4.8 31 4-35 29-60 (381)
387 1y7t_A Malate dehydrogenase; N 62.2 8 0.00027 34.0 4.6 32 3-34 4-42 (327)
388 3uko_A Alcohol dehydrogenase c 62.2 5.6 0.00019 35.5 3.6 29 5-34 196-225 (378)
389 2bll_A Protein YFBG; decarboxy 62.1 8.9 0.0003 32.9 4.8 32 4-35 1-33 (345)
390 2b5w_A Glucose dehydrogenase; 62.0 11 0.00038 33.2 5.6 31 4-35 174-207 (357)
391 1rkx_A CDP-glucose-4,6-dehydra 61.8 7.4 0.00025 33.8 4.3 32 3-35 9-41 (357)
392 2cf5_A Atccad5, CAD, cinnamyl 61.6 3.7 0.00013 36.5 2.3 30 5-35 183-212 (357)
393 2gas_A Isoflavone reductase; N 61.4 6.2 0.00021 33.4 3.6 31 4-35 3-34 (307)
394 2bka_A CC3, TAT-interacting pr 61.2 6.4 0.00022 32.1 3.6 32 3-34 18-51 (242)
395 2eez_A Alanine dehydrogenase; 61.2 8.4 0.00029 34.6 4.6 30 4-34 167-196 (369)
396 2c5a_A GDP-mannose-3', 5'-epim 61.0 9.9 0.00034 33.6 5.0 31 4-35 30-61 (379)
397 1q0q_A 1-deoxy-D-xylulose 5-ph 60.8 8.7 0.0003 35.6 4.6 112 4-125 10-132 (406)
398 2y1e_A 1-deoxy-D-xylulose 5-ph 60.8 8.7 0.0003 35.5 4.6 43 4-46 22-66 (398)
399 1y1p_A ARII, aldehyde reductas 60.7 10 0.00036 32.3 5.0 32 3-35 11-43 (342)
400 2pbz_A Hypothetical protein; N 60.6 8 0.00027 34.5 4.3 33 2-36 1-33 (320)
401 3enk_A UDP-glucose 4-epimerase 60.5 10 0.00035 32.5 4.9 32 3-35 5-37 (341)
402 4dio_A NAD(P) transhydrogenase 60.4 8.4 0.00029 35.7 4.5 31 4-36 191-221 (405)
403 1pzg_A LDH, lactate dehydrogen 59.9 8.4 0.00029 34.2 4.4 32 4-36 10-41 (331)
404 1b8p_A Protein (malate dehydro 59.9 8.7 0.0003 34.0 4.4 24 3-26 5-29 (329)
405 4hb9_A Similarities with proba 59.8 9.1 0.00031 33.4 4.5 29 4-33 2-30 (412)
406 4aj2_A L-lactate dehydrogenase 59.8 11 0.00038 33.7 5.2 34 3-36 19-52 (331)
407 2q1w_A Putative nucleotide sug 59.7 10 0.00035 32.8 4.8 31 4-35 22-53 (333)
408 2v6b_A L-LDH, L-lactate dehydr 59.6 10 0.00035 33.1 4.8 33 4-36 1-33 (304)
409 2jhf_A Alcohol dehydrogenase E 59.5 15 0.00051 32.6 5.9 29 5-34 194-223 (374)
410 3fr7_A Putative ketol-acid red 59.5 7.7 0.00026 37.2 4.1 31 4-35 55-91 (525)
411 4e4t_A Phosphoribosylaminoimid 59.4 10 0.00034 34.7 4.9 30 4-34 36-65 (419)
412 1xgk_A Nitrogen metabolite rep 59.2 9.5 0.00032 33.7 4.6 32 3-35 5-37 (352)
413 2pzm_A Putative nucleotide sug 59.0 10 0.00036 32.6 4.7 32 3-35 20-52 (330)
414 1rpn_A GDP-mannose 4,6-dehydra 58.3 11 0.00037 32.3 4.7 32 3-35 14-46 (335)
415 3ko8_A NAD-dependent epimerase 58.1 11 0.00036 32.0 4.5 31 4-35 1-32 (312)
416 3ax6_A Phosphoribosylaminoimid 58.0 11 0.00039 33.3 4.9 31 4-35 2-32 (380)
417 3ehe_A UDP-glucose 4-epimerase 58.0 8.2 0.00028 32.9 3.8 30 4-35 2-32 (313)
418 3vku_A L-LDH, L-lactate dehydr 57.7 10 0.00034 33.9 4.5 34 3-36 9-42 (326)
419 3ado_A Lambda-crystallin; L-gu 57.7 9.6 0.00033 34.0 4.3 36 4-43 7-42 (319)
420 2x6t_A ADP-L-glycero-D-manno-h 57.5 9.8 0.00034 33.1 4.3 32 4-35 47-79 (357)
421 3oh8_A Nucleoside-diphosphate 57.4 11 0.00038 35.2 4.9 31 4-35 148-179 (516)
422 2zqz_A L-LDH, L-lactate dehydr 57.3 10 0.00035 33.7 4.5 34 3-36 9-42 (326)
423 2bi7_A UDP-galactopyranose mut 57.1 12 0.0004 33.7 4.9 33 1-34 1-33 (384)
424 1e3j_A NADP(H)-dependent ketos 57.0 11 0.00037 33.2 4.5 29 5-34 171-199 (352)
425 1oju_A MDH, malate dehydrogena 56.8 9.5 0.00033 33.5 4.1 33 4-36 1-33 (294)
426 1p0f_A NADP-dependent alcohol 56.7 9.2 0.00031 34.0 4.0 29 5-34 194-223 (373)
427 2q1s_A Putative nucleotide sug 56.5 12 0.0004 33.0 4.7 32 4-35 33-65 (377)
428 1smk_A Malate dehydrogenase, g 56.0 12 0.0004 33.2 4.6 31 3-33 8-40 (326)
429 1x7d_A Ornithine cyclodeaminas 55.9 9.4 0.00032 34.3 4.0 38 4-43 130-167 (350)
430 4a2c_A Galactitol-1-phosphate 55.9 3.5 0.00012 36.1 1.1 29 5-33 163-191 (346)
431 1iow_A DD-ligase, DDLB, D-ALA\ 55.8 13 0.00044 31.5 4.7 32 3-35 2-42 (306)
432 1vl0_A DTDP-4-dehydrorhamnose 55.8 11 0.00037 31.7 4.2 31 3-34 12-43 (292)
433 2rh8_A Anthocyanidin reductase 55.8 12 0.00042 32.0 4.6 30 4-34 10-40 (338)
434 1guz_A Malate dehydrogenase; o 55.7 13 0.00043 32.6 4.7 30 4-33 1-31 (310)
435 1db3_A GDP-mannose 4,6-dehydra 55.6 13 0.00044 32.3 4.7 31 4-35 2-33 (372)
436 1ez4_A Lactate dehydrogenase; 55.5 11 0.00037 33.4 4.3 34 3-36 5-38 (318)
437 3hdj_A Probable ornithine cycl 55.4 12 0.0004 33.2 4.4 34 4-37 122-155 (313)
438 3hhp_A Malate dehydrogenase; M 54.9 12 0.0004 33.2 4.4 22 4-25 1-23 (312)
439 1kew_A RMLB;, DTDP-D-glucose 4 54.8 11 0.00037 32.7 4.1 32 4-35 1-33 (361)
440 2hrz_A AGR_C_4963P, nucleoside 54.7 9.9 0.00034 32.7 3.8 33 2-34 13-52 (342)
441 3qwb_A Probable quinone oxidor 54.6 6 0.00021 34.6 2.4 30 5-35 151-181 (334)
442 4ffl_A PYLC; amino acid, biosy 53.6 15 0.00051 32.3 4.9 30 4-34 2-31 (363)
443 1o6z_A MDH, malate dehydrogena 53.2 15 0.00051 32.1 4.8 24 4-27 1-25 (303)
444 4dim_A Phosphoribosylglycinami 53.2 13 0.00044 33.1 4.4 35 1-36 4-39 (403)
445 3s2e_A Zinc-containing alcohol 53.1 4.1 0.00014 35.8 1.0 30 5-35 169-198 (340)
446 3krt_A Crotonyl COA reductase; 53.1 34 0.0012 31.3 7.4 30 5-35 231-261 (456)
447 3fbs_A Oxidoreductase; structu 52.7 16 0.00054 30.3 4.7 32 1-34 1-32 (297)
448 4a9w_A Monooxygenase; baeyer-v 52.5 13 0.00043 31.7 4.1 33 1-34 1-33 (357)
449 1vj0_A Alcohol dehydrogenase, 52.4 6.6 0.00023 35.2 2.3 138 5-168 198-341 (380)
450 1i24_A Sulfolipid biosynthesis 52.4 15 0.00052 32.3 4.7 30 4-34 12-42 (404)
451 2z04_A Phosphoribosylaminoimid 51.9 14 0.00047 32.5 4.3 31 4-35 2-32 (365)
452 2xxj_A L-LDH, L-lactate dehydr 51.9 16 0.00056 32.1 4.8 33 4-36 1-33 (310)
453 4id9_A Short-chain dehydrogena 51.6 13 0.00046 31.9 4.2 32 3-35 19-51 (347)
454 2p5y_A UDP-glucose 4-epimerase 51.5 16 0.00055 30.9 4.6 31 4-35 1-32 (311)
455 4gx0_A TRKA domain protein; me 51.4 17 0.00058 34.3 5.2 31 4-35 349-379 (565)
456 4a7p_A UDP-glucose dehydrogena 51.4 15 0.00051 34.2 4.6 31 3-34 8-38 (446)
457 1jw9_B Molybdopterin biosynthe 51.4 18 0.00061 30.6 4.8 31 4-35 32-63 (249)
458 2pn1_A Carbamoylphosphate synt 51.3 13 0.00045 32.0 4.1 33 1-34 2-35 (331)
459 3d1c_A Flavin-containing putat 51.3 16 0.00054 31.6 4.6 34 1-35 2-36 (369)
460 1wdk_A Fatty oxidation complex 51.0 10 0.00036 37.4 3.7 31 4-36 315-345 (715)
461 1mld_A Malate dehydrogenase; o 50.8 15 0.00053 32.2 4.5 33 4-36 1-34 (314)
462 2dkn_A 3-alpha-hydroxysteroid 50.3 19 0.00065 29.2 4.7 30 5-35 3-33 (255)
463 3jyn_A Quinone oxidoreductase; 50.2 5.1 0.00018 34.9 1.2 30 5-35 143-173 (325)
464 4eye_A Probable oxidoreductase 49.9 9.4 0.00032 33.6 2.9 30 5-35 162-192 (342)
465 1c0p_A D-amino acid oxidase; a 49.9 21 0.00071 31.0 5.2 32 3-35 6-37 (363)
466 2dwc_A PH0318, 433AA long hypo 49.8 18 0.00061 32.7 4.9 31 4-35 20-50 (433)
467 3bfp_A Acetyltransferase; LEFT 49.8 14 0.00049 29.7 3.8 33 2-35 2-34 (194)
468 1n2s_A DTDP-4-, DTDP-glucose o 49.7 13 0.00046 31.1 3.8 30 4-35 1-31 (299)
469 1kjq_A GART 2, phosphoribosylg 49.3 20 0.00067 31.7 5.0 32 3-35 11-42 (391)
470 1hye_A L-lactate/malate dehydr 49.1 18 0.00062 31.6 4.7 24 4-27 1-25 (313)
471 3vtf_A UDP-glucose 6-dehydroge 48.7 14 0.00049 34.5 4.1 36 4-43 22-57 (444)
472 3rft_A Uronate dehydrogenase; 48.4 13 0.00043 31.2 3.4 32 1-33 1-33 (267)
473 1yvv_A Amine oxidase, flavin-c 48.3 16 0.00056 31.0 4.2 31 3-34 2-32 (336)
474 2bw0_A 10-FTHFDH, 10-formyltet 48.3 15 0.00052 32.7 4.1 33 1-34 20-52 (329)
475 2xdo_A TETX2 protein; tetracyc 48.1 21 0.00072 31.6 5.0 31 3-34 26-56 (398)
476 2cul_A Glucose-inhibited divis 48.0 19 0.00064 29.5 4.4 34 1-35 1-34 (232)
477 1pjq_A CYSG, siroheme synthase 47.8 31 0.001 32.0 6.2 92 4-126 13-106 (457)
478 3d7l_A LIN1944 protein; APC893 47.7 21 0.00073 28.1 4.5 30 4-35 4-34 (202)
479 1udb_A Epimerase, UDP-galactos 47.7 19 0.00065 30.8 4.5 30 4-34 1-31 (338)
480 2pk3_A GDP-6-deoxy-D-LYXO-4-he 47.5 21 0.00071 30.2 4.7 31 4-35 13-44 (321)
481 1y56_B Sarcosine oxidase; dehy 47.5 17 0.00058 31.6 4.2 34 1-35 1-36 (382)
482 1z7e_A Protein aRNA; rossmann 47.4 18 0.00062 34.8 4.7 33 3-35 315-348 (660)
483 2egg_A AROE, shikimate 5-dehyd 47.3 20 0.00068 31.2 4.6 30 4-34 142-172 (297)
484 1pjc_A Protein (L-alanine dehy 47.1 20 0.00068 32.0 4.6 30 4-34 168-197 (361)
485 4a0s_A Octenoyl-COA reductase/ 46.8 63 0.0021 29.2 8.1 29 5-34 223-252 (447)
486 4ea9_A Perosamine N-acetyltran 46.7 23 0.00079 28.9 4.7 32 4-36 13-44 (220)
487 3q0i_A Methionyl-tRNA formyltr 46.6 21 0.00072 31.7 4.7 34 1-35 4-38 (318)
488 2vou_A 2,6-dihydroxypyridine h 46.3 23 0.00077 31.4 4.9 32 2-34 4-35 (397)
489 3au8_A 1-deoxy-D-xylulose 5-ph 45.9 17 0.00058 34.4 4.0 42 4-46 78-124 (488)
490 3phh_A Shikimate dehydrogenase 45.8 29 0.00097 30.1 5.3 32 4-36 119-150 (269)
491 1gy8_A UDP-galactose 4-epimera 45.8 24 0.00081 30.9 4.9 31 4-35 3-35 (397)
492 3c96_A Flavin-containing monoo 45.4 20 0.00067 31.9 4.3 33 1-34 1-35 (410)
493 4hv4_A UDP-N-acetylmuramate--L 45.4 49 0.0017 30.8 7.3 83 4-118 23-106 (494)
494 1eq2_A ADP-L-glycero-D-mannohe 44.9 22 0.00075 29.8 4.4 31 5-35 1-32 (310)
495 2w70_A Biotin carboxylase; lig 44.4 14 0.00048 33.6 3.2 32 1-34 1-32 (449)
496 2i6t_A Ubiquitin-conjugating e 44.2 20 0.0007 31.4 4.2 33 4-36 15-47 (303)
497 3u62_A Shikimate dehydrogenase 44.1 21 0.00071 30.5 4.1 30 5-35 110-140 (253)
498 2gv8_A Monooxygenase; FMO, FAD 44.0 26 0.00089 31.7 5.0 31 3-34 6-38 (447)
499 1vkz_A Phosphoribosylamine--gl 44.0 24 0.00082 31.8 4.7 33 1-34 13-45 (412)
500 1yo6_A Putative carbonyl reduc 43.7 29 0.00099 28.0 4.8 35 1-35 1-37 (250)
No 1
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=1.2e-88 Score=622.11 Aligned_cols=237 Identities=59% Similarity=0.936 Sum_probs=232.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~d 83 (252)
+||||||||||||+++|++++++++++|+|||++++++|++|||||||+||+|+ ++++++++ +|.|||++|++++++|
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~d 79 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYA-GEVSHDDK-HIIVDGKKIATYQERD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSS
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEEeecc
Confidence 699999999999999999999989999999999999999999999999999999 99999999 9999999999999999
Q ss_pred CCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCCCCeEEeecCccccCCCCCeEEcCCchhhhHHHHH
Q 025476 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLAPLA 163 (252)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~vV~gVN~~~~~~~~~IIS~asCtT~~Lap~l 163 (252)
|+++||++.|+|||+||||.|+++|+|+.|+++||||||||+||+|+||||||||++.|+++++||||||||||||+|++
T Consensus 80 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~l 159 (332)
T 3pym_A 80 PANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLA 159 (332)
T ss_dssp GGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHH
T ss_pred cccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEcccchh
Q 025476 164 KVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLLSTV 242 (252)
Q Consensus 164 k~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~~~~ 242 (252)
|+|||+|||++++|||||++|++|+++|+|+++|||++|++++||||++||++++++||||+|+||++++|+||||..+
T Consensus 160 kvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~ 238 (332)
T 3pym_A 160 KVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDV 238 (332)
T ss_dssp HHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSC
T ss_pred HHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCCCCc
Confidence 9999999999999999999999999999988899999999999999999999999999999999999999999999865
No 2
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=4.6e-88 Score=619.40 Aligned_cols=241 Identities=80% Similarity=1.225 Sum_probs=233.0
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCc-ceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHH-ELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~-~v~~~~~~~l~i~G~~i~v~ 79 (252)
|.++||||||||||||+++|++++++++++|+|||++++++|++|||||||+||+|+ + +++++++++|.|||++|+++
T Consensus 1 m~~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~~v~~~~~~~l~i~Gk~I~v~ 79 (337)
T 3v1y_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWK-HSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCC-SSCEEEEETTEEEETTEEEEEE
T ss_pred CCceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCccc-CceEEEcCCcEEEECCEEEEEE
Confidence 556899999999999999999999989999999999999999999999999999999 9 99997653799999999999
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCCCCeEEeecCccccCCCCCeEEcCCchhhhH
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCL 159 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~vV~gVN~~~~~~~~~IIS~asCtT~~L 159 (252)
+++||+++||++.|+|||+||||.|+++|+|+.|+++||||||||+||+|+||||||||++.|+++++||||||||||||
T Consensus 80 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~L 159 (337)
T 3v1y_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 159 (337)
T ss_dssp CCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred EecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEccc
Q 025476 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLL 239 (252)
Q Consensus 160 ap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~ 239 (252)
+|++|+|||+|||++++|||||++|++|+++|+++.+|||++|++++||||++||++++++||||+|+||++++|+||||
T Consensus 160 ap~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 239 (337)
T 3v1y_O 160 APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPT 239 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEECSC
T ss_pred HHHHHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEEcCC
Confidence 99999999999999999999999999999999987799999999999999999999999999999999999999999999
Q ss_pred chh
Q 025476 240 STV 242 (252)
Q Consensus 240 ~~~ 242 (252)
..+
T Consensus 240 ~~~ 242 (337)
T 3v1y_O 240 VDV 242 (337)
T ss_dssp SSC
T ss_pred CCc
Confidence 865
No 3
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=1.4e-87 Score=615.91 Aligned_cols=238 Identities=45% Similarity=0.665 Sum_probs=230.8
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
|.+||||||||||||+++|++++++++++|+||| +++++|++|||||||+||+|+ ++++++++ +|.|||++|+++++
T Consensus 3 m~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind-~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e 79 (338)
T 3lvf_P 3 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDG-GFRVNGKEVKSFSE 79 (338)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC-SSCHHHHHHHHHCCTTTCCCS-SCEEEETT-EEEETTEEEEEECC
T ss_pred ccEEEEEECCCcHHHHHHHHHHHCCCceEEEEec-CCCHHHHHHHhccCCCCCCcC-CeEEEcCC-EEEECCEEEEEEEe
Confidence 3489999999999999999999998999999999 589999999999999999999 99999999 99999999999999
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-CCCeEEeecCccccCCCCCeEEcCCchhhhHH
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-d~p~vV~gVN~~~~~~~~~IIS~asCtT~~La 160 (252)
+||+++||++.|+|||+||||.|+++|+|+.|+++||||||||+|++ |+||||||||++.|+++++||||||||||||+
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~La 159 (338)
T 3lvf_P 80 PDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLA 159 (338)
T ss_dssp SCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHH
T ss_pred cccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhH
Confidence 99999999999999999999999999999999999999999999987 68999999999999988899999999999999
Q ss_pred HHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCC-cccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEccc
Q 025476 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSK-DWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLL 239 (252)
Q Consensus 161 p~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~-~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~ 239 (252)
|++|+|||+|||++++||||||+|++|+++|+|+.+ |||++|++++||||++||++++++||||||+||++++||||||
T Consensus 160 p~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 239 (338)
T 3lvf_P 160 PVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPV 239 (338)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEEESC
T ss_pred HHHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEEcCC
Confidence 999999999999999999999999999999998766 9999999999999999999999999999999999999999999
Q ss_pred chh
Q 025476 240 STV 242 (252)
Q Consensus 240 ~~~ 242 (252)
..+
T Consensus 240 ~~~ 242 (338)
T 3lvf_P 240 ATG 242 (338)
T ss_dssp SSC
T ss_pred Cce
Confidence 865
No 4
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=2.5e-87 Score=618.00 Aligned_cols=239 Identities=51% Similarity=0.832 Sum_probs=231.1
Q ss_pred CcceEEEEcCChhHHHHHHH----HHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEE--------cCCeee
Q 025476 2 GKVKIGINGFGRIGRLVARV----ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKV--------KDDKTL 69 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~----~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~--------~~~~~l 69 (252)
|.+||||||||||||+++|+ +++++++++|+||||+++++|++|||||||+||+|+ +++++ +++ +|
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~-~~v~~~~~~~~~~~~~-~l 78 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFK-YEVTTTKSSPSVAKDD-TL 78 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECS-SCEEEECSCTTSSSCC-EE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEe-eEEEecccccccCCCC-EE
Confidence 34899999999999999999 788888999999999999999999999999999999 99999 787 99
Q ss_pred EECCeeEEEEe-ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-CCCeEEeecCccccCC-CC
Q 025476 70 LFGEKPVTVFG-VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-EL 146 (252)
Q Consensus 70 ~i~G~~i~v~~-~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-d~p~vV~gVN~~~~~~-~~ 146 (252)
.|||++|++++ ++||+++||++.|+|||+||||.|+++|+|+.|+++||||||||+|++ |+||||||||++.|++ ++
T Consensus 79 ~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~ 158 (359)
T 3ids_C 79 VVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEH 158 (359)
T ss_dssp EETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTC
T ss_pred EECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCC
Confidence 99999999998 999999999999999999999999999999999999999999999987 7999999999999997 78
Q ss_pred CeEEcCCchhhhHHHHHHHH-HhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhcc
Q 025476 147 NIVSNASCTTNCLAPLAKVI-HDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRM 225 (252)
Q Consensus 147 ~IIS~asCtT~~Lap~lk~L-~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~ 225 (252)
+||||||||||||+|++|+| ||+|||++++|||||++|++|+++|+|+.+|||++|++++||||++||++++++|||||
T Consensus 159 ~IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPe 238 (359)
T 3ids_C 159 HVVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPS 238 (359)
T ss_dssp SEEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSGG
T ss_pred CEEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhchh
Confidence 99999999999999999999 99999999999999999999999999877899999999999999999999999999999
Q ss_pred CCCceeEEEEEcccchh
Q 025476 226 FVVLLWSLADRSLLSTV 242 (252)
Q Consensus 226 l~gkl~~~a~rVP~~~~ 242 (252)
|+||++++||||||..+
T Consensus 239 L~gkltg~avRVPv~~v 255 (359)
T 3ids_C 239 TQGKLTGMSFRVPTPDV 255 (359)
T ss_dssp GTTSEEEEEEEESCSSC
T ss_pred hcCceEEEEEEcCCCCc
Confidence 99999999999999865
No 5
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=6.5e-87 Score=611.38 Aligned_cols=237 Identities=45% Similarity=0.710 Sum_probs=230.0
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcC--CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~--~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
|+ +||||||||||||+++|+++++ +++++|+|||+ .+++|++|||||||+||+|+ ++++++++ +|.|||++|++
T Consensus 1 m~-~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~-~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v 76 (335)
T 3doc_A 1 MA-VRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL-GPVETNAHLLRYDSVHGRFP-KEVEVAGD-TIDVGYGPIKV 76 (335)
T ss_dssp CC-EEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCCEECSS-EEESSSSEEEE
T ss_pred CC-EEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC-CCHHHHHHHhcccCCCCCCC-CeEEEecC-EEEECCEEEEE
Confidence 44 8999999999999999999988 68999999999 79999999999999999999 99999999 99999999999
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCC-CCeEEeecCccccCCCCCeEEcCCchhh
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTN 157 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~vV~gVN~~~~~~~~~IIS~asCtT~ 157 (252)
++++||+++||++.|+|||+||||.|+++|+|+.|+++||||||||+|++| +||||||||++.|+++++||||||||||
T Consensus 77 ~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn 156 (335)
T 3doc_A 77 HAVRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTN 156 (335)
T ss_dssp ECCSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHH
T ss_pred EeecccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhh
Confidence 999999999999999999999999999999999999999999999999987 6999999999999988899999999999
Q ss_pred hHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEc
Q 025476 158 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRS 237 (252)
Q Consensus 158 ~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rV 237 (252)
||+|++|+|||+|||++++|||||++|++|+++|+| ++|||++|++++||||++||++++++|+||+|+||++++|+||
T Consensus 157 ~Lap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p-~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRV 235 (335)
T 3doc_A 157 CLAPVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTM-HKDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRV 235 (335)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCC-CSSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEE
T ss_pred hhHHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCc-cccccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEe
Confidence 999999999999999999999999999999999998 4999999999999999999999999999999999999999999
Q ss_pred ccchh
Q 025476 238 LLSTV 242 (252)
Q Consensus 238 P~~~~ 242 (252)
||..+
T Consensus 236 Pv~~~ 240 (335)
T 3doc_A 236 PTPNV 240 (335)
T ss_dssp SCSSC
T ss_pred ccccc
Confidence 99865
No 6
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=1.4e-86 Score=611.34 Aligned_cols=237 Identities=58% Similarity=0.966 Sum_probs=231.7
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
++||||||||||||+++|++++++ +++|+||||++++++++|||||||+||+|+ ++++++++ +|.+||++|++++++
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNG-QLVVDNHEISVYQCK 83 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred eeEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCC-CcEEEcCC-EEEECCEEEEEEecC
Confidence 379999999999999999999987 999999999999999999999999999999 99999999 999999999999999
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCCCCeEEeecCccccCC-CCCeEEcCCchhhhHHH
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~vV~gVN~~~~~~-~~~IIS~asCtT~~Lap 161 (252)
||++++|++.|+|||+||||.|+++|+|+.|+++||||||||+||+|+||||||||++.|++ +++||||||||||||+|
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap 163 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAP 163 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999997 78999999999999999
Q ss_pred HHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEcccch
Q 025476 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLLST 241 (252)
Q Consensus 162 ~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~~~ 241 (252)
++|+|||+|||++++||||||+|++|+++|+|+++|||++|++++||||++||++++++||+|+|+||++++|+||||..
T Consensus 164 ~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv~~ 243 (346)
T 3h9e_O 164 LAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPD 243 (346)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEccccc
Confidence 99999999999999999999999999999999889999999999999999999999999999999999999999999976
Q ss_pred h
Q 025476 242 V 242 (252)
Q Consensus 242 ~ 242 (252)
+
T Consensus 244 ~ 244 (346)
T 3h9e_O 244 V 244 (346)
T ss_dssp C
T ss_pred c
Confidence 5
No 7
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=7.7e-87 Score=611.95 Aligned_cols=235 Identities=44% Similarity=0.741 Sum_probs=216.9
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~d 83 (252)
+||||||||||||+++|++++++++++|+|||+ .+++|++|||||||+||+|+ ++++++++ +|.|||++|++++++|
T Consensus 5 ~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~-~d~~~~a~llkyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~d 81 (345)
T 4dib_A 5 TRVAINGFGRIGRMVFRQAIKESAFEIVAINAS-YPSETLAHLIKYDTVHGKFD-GTVEAFED-HLLVDGKMIRLLNNRD 81 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCSC
T ss_pred EEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC-CCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEeecCC
Confidence 799999999999999999999989999999999 69999999999999999999 99999999 9999999999999999
Q ss_pred CCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-CCCeEEeecCccccCC-CCCeEEcCCchhhhHHH
Q 025476 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (252)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-d~p~vV~gVN~~~~~~-~~~IIS~asCtT~~Lap 161 (252)
|+++||++.|+|||+||||.|+++|+|+.|+++||||||||+|++ |+||||||||++.|++ +++||||||||||||+|
T Consensus 82 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~Lap 161 (345)
T 4dib_A 82 PKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLAP 161 (345)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred hhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhHH
Confidence 999999999999999999999999999999999999999999987 5899999999999997 68999999999999999
Q ss_pred HHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEcccch
Q 025476 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLLST 241 (252)
Q Consensus 162 ~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~~~ 241 (252)
++|+|||+|||++++|||||++|++|+++|+|+ +|||++|++++||||++||++++++||||+|+||++++|+||||..
T Consensus 162 ~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~~ 240 (345)
T 4dib_A 162 VVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPN 240 (345)
T ss_dssp HHHHHHHHHCEEEEEEEEEECC--------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCSS
T ss_pred HHHHHHHhcCeEEEEEEeeeeccCCceeccccc-cccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCcc
Confidence 999999999999999999999999999999986 9999999999999999999999999999999999999999999986
Q ss_pred h
Q 025476 242 V 242 (252)
Q Consensus 242 ~ 242 (252)
+
T Consensus 241 ~ 241 (345)
T 4dib_A 241 V 241 (345)
T ss_dssp E
T ss_pred c
Confidence 5
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=7.3e-84 Score=594.35 Aligned_cols=236 Identities=43% Similarity=0.728 Sum_probs=228.1
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
|.+||||||||||||+++|+++++ +|++|+|||+ .+++|++|||||||+||+|+ ++++++++ +|.|||++|+++++
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl-~d~~~~a~llkydS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~~ 95 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFER-GIDIVAINDL-TDPKTLAHLLKYDSTFGVYN-KKVESRDG-AIVVDGREIKIIAE 95 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECC
T ss_pred CCeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCHHHhhhhhccccCCCCCC-CCEEEcCC-EEEECCEEEEEEEc
Confidence 358999999999999999999999 6999999999 69999999999999999999 99999999 99999999999999
Q ss_pred cCCCCCCCcccCccEEEecCCCCCC----HHhHHHHHh-CCCCEEEEcCCCCC-CCeEEeecCccccCCCCCeEEcCCch
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLK-GGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCT 155 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~----~~~a~~h~~-~GakkViis~ps~d-~p~vV~gVN~~~~~~~~~IIS~asCt 155 (252)
+||+++||++.|+|||+||||.|++ +|+++.|++ +||||||||+||+| +||||||||++.|+++.+||||||||
T Consensus 96 ~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCT 175 (356)
T 3hja_A 96 RDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCT 175 (356)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHH
T ss_pred CChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccc
Confidence 9999999999999999999999999 999999999 99999999999987 69999999999999878999999999
Q ss_pred hhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEE
Q 025476 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLAD 235 (252)
Q Consensus 156 T~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~ 235 (252)
||||+|++|+|||+|||++++|||||++|++|+++|+|+ +||||+|++++||||++||++++++||||+|+||++++|+
T Consensus 176 Tn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~av 254 (356)
T 3hja_A 176 TNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSM 254 (356)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEEE
T ss_pred hhhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcc-cccccccccccEEEcCCCchHHHHHHhccccCCcEEEEEE
Confidence 999999999999999999999999999999999999986 9999999999999999999999999999999999999999
Q ss_pred Ecccchh
Q 025476 236 RSLLSTV 242 (252)
Q Consensus 236 rVP~~~~ 242 (252)
||||..+
T Consensus 255 RVPv~~~ 261 (356)
T 3hja_A 255 RVPVPTG 261 (356)
T ss_dssp EESCSSC
T ss_pred EcCCCcc
Confidence 9999865
No 9
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=8.3e-82 Score=580.75 Aligned_cols=240 Identities=58% Similarity=0.912 Sum_probs=230.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
|..+||||||||||||+++|++++++++|+|+||||+.+++|++|||||||+||+|+ ++++++++ +|.+||++|.+++
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~-~~v~~~~~-~l~v~Gk~i~v~~ 86 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFP-CEVTHADG-FLLIGEKKVSVFA 86 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEESSCEEEEEC
T ss_pred hhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCC-CCEEEcCC-EEEECCEEEEEEE
Confidence 456899999999999999999999999999999998899999999999999999999 99999998 9999999999999
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCC-CCeEEeecCccccCCCCCeEEcCCchhhhH
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCL 159 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~vV~gVN~~~~~~~~~IIS~asCtT~~L 159 (252)
++||++++|++.|+||||||||.|+++|+++.|+++||||||||+|++| +||||||||++.|++.++||||||||||||
T Consensus 87 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~L 166 (345)
T 2b4r_O 87 EKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCL 166 (345)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred cCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHH
Confidence 9999999999999999999999999999999999999999999999876 799999999999997678999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCC--CCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEc
Q 025476 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS--SKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRS 237 (252)
Q Consensus 160 ap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~--~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rV 237 (252)
+|++|+|||+|||++++|||||++|++|+++|+|+ ++|||++|++++||||++||++++++||||+|+||++++|+||
T Consensus 167 ap~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRV 246 (345)
T 2b4r_O 167 APLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRV 246 (345)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEEC
T ss_pred HHHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEEe
Confidence 99999999999999999999999999999999985 3899999999999999999999999999999999999999999
Q ss_pred ccchh
Q 025476 238 LLSTV 242 (252)
Q Consensus 238 P~~~~ 242 (252)
||..+
T Consensus 247 Pv~~g 251 (345)
T 2b4r_O 247 PIGTV 251 (345)
T ss_dssp SCSSC
T ss_pred cccce
Confidence 99865
No 10
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=7.6e-81 Score=573.03 Aligned_cols=235 Identities=41% Similarity=0.631 Sum_probs=227.9
Q ss_pred ceEEEEcCChhHHHHHHHHHcC---CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQR---DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~---~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
+||||||||||||+++|+++++ +++++|+|||+ ++++|++|||||||+||+|+ ++++++++ +|.+||++|++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll~ydS~hg~f~-~~v~~~~~-~l~v~g~~i~v~~ 78 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFP-GTVSVNGS-YMVVNGDKIRVDA 78 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHhccCCcCCCCC-CCEEEeCC-EEEECCEEEEEEE
Confidence 6999999999999999999998 78999999996 79999999999999999999 99999998 9999999999999
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-CCC-eEEeecCccccCCCCCeEEcCCchhhh
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAP-MFVVGVNENEYKPELNIVSNASCTTNC 158 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-d~p-~vV~gVN~~~~~~~~~IIS~asCtT~~ 158 (252)
++||++++|++.|+||||||||.|+++++++.|+++||||||||+|++ |+| |||||||++.|++.++|||||||||||
T Consensus 79 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~ 158 (335)
T 1obf_O 79 NRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNC 158 (335)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHH
T ss_pred cCCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHH
Confidence 999999999999999999999999999999999999999999999987 789 999999999999767899999999999
Q ss_pred HHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEcc
Q 025476 159 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSL 238 (252)
Q Consensus 159 Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP 238 (252)
|+|++|+|||+|||++++|||||++|++|+++|+| ++|||++|++++||||++||++++++||||+|+||++++|+|||
T Consensus 159 Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~-~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVP 237 (335)
T 1obf_O 159 LAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVY-HEDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVP 237 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCC-CSSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEES
T ss_pred HHHHHHHHHHhcCeeEEEEEEEchhhhhhhhhccc-ccccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEee
Confidence 99999999999999999999999999999999998 58999999999999999999999999999999999999999999
Q ss_pred cchh
Q 025476 239 LSTV 242 (252)
Q Consensus 239 ~~~~ 242 (252)
|..+
T Consensus 238 v~~~ 241 (335)
T 1obf_O 238 TINV 241 (335)
T ss_dssp CSSC
T ss_pred ccce
Confidence 9865
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=2.3e-81 Score=577.56 Aligned_cols=236 Identities=47% Similarity=0.794 Sum_probs=228.6
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
++||||||||||||+++|++++++++++|+|||+ ++++|++|||+|||+||+|+ ++++++++ +|.+||++|++++++
T Consensus 2 ~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~-~~~~~~a~ll~yDs~hG~~~-~~v~~~~~-~l~v~Gk~i~v~~~~ 78 (342)
T 2ep7_A 2 AIKVGINGFGRIGRSFFRASWGREEIEIVAINDL-TDAKHLAHLLKYDSVHGIFK-GSVEAKDD-SIVVDGKEIKVFAQK 78 (342)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-CChHHHhhhhhcccccccCC-CcEEEcCC-EEEECCEEEEEEEcC
Confidence 3799999999999999999999989999999995 79999999999999999999 99999998 999999999999999
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCCCC-eEEeecCccccCC-CCCeEEcCCchhhhHH
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNENEYKP-ELNIVSNASCTTNCLA 160 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d~p-~vV~gVN~~~~~~-~~~IIS~asCtT~~La 160 (252)
||++++|++.|+||||||||.|+++|+++.|+++||||||||+|++|+| |||||||++.|++ .++||||||||||||+
T Consensus 79 dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~La 158 (342)
T 2ep7_A 79 DPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLA 158 (342)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 9999999999997 6789999999999999
Q ss_pred HHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEcccc
Q 025476 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLLS 240 (252)
Q Consensus 161 p~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~~ 240 (252)
|++|+|||+|||++++|||||++|++|+++|+| ++|||++|++++||||++||++++++||||+|+||++++|+||||.
T Consensus 159 p~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p-~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~ 237 (342)
T 2ep7_A 159 PCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLP-HKDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVP 237 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHHcCeeEEEEEEEeecccchhhhcCC-cchhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEeccc
Confidence 999999999999999999999999999999998 6999999999999999999999999999999999999999999998
Q ss_pred hh
Q 025476 241 TV 242 (252)
Q Consensus 241 ~~ 242 (252)
.+
T Consensus 238 ~~ 239 (342)
T 2ep7_A 238 DG 239 (342)
T ss_dssp SC
T ss_pred ce
Confidence 65
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=1.1e-73 Score=526.07 Aligned_cols=235 Identities=48% Similarity=0.718 Sum_probs=226.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~d 83 (252)
+||||||||||||.++|+++++ ++++++|||+ .++++++|||+|||+||+|+ ++++++++ .|.++|+.|++++++|
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~-~~~~~~a~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDL-TDNKTLAHLLKYDSIYHRFP-GEVAYDDQ-YLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecC-CCHHHHhHhhhccccCCCCC-ceEEEcCC-EEEECCEEEEEEecCC
Confidence 4999999999999999999988 7999999996 79999999999999999999 99999988 9999999999998899
Q ss_pred CCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCC-CCeEEeecCccccCC-CCCeEEcCCchhhhHHH
Q 025476 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (252)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~vV~gVN~~~~~~-~~~IIS~asCtT~~Lap 161 (252)
|++++|++.++|+||||||.|+++++++.|+++||||||||+|++| +|+||||||++.|++ .++||||||||||||+|
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap 156 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAP 156 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999887 799999999999996 47899999999999999
Q ss_pred HHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEcccch
Q 025476 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLLST 241 (252)
Q Consensus 162 ~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~~~ 241 (252)
++||||++|||++++|||||++|++|+++|++ ++|||++|++++||||+++|++++++||+|+|+||++++|+|||++.
T Consensus 157 ~lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~-~~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~ 235 (331)
T 2g82_O 157 VMKVLEEAFGVEKALMTTVHSYTNDQRLLDLP-HKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTAT 235 (331)
T ss_dssp HHHHHHHHTCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSS
T ss_pred HHHHHHHhcCccEEEEEEEeecccccchhccc-cccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCC
Confidence 99999999999999999999999999999987 58999999999999999999999999999999999999999999987
Q ss_pred hh
Q 025476 242 VI 243 (252)
Q Consensus 242 ~~ 243 (252)
+.
T Consensus 236 gs 237 (331)
T 2g82_O 236 GS 237 (331)
T ss_dssp CE
T ss_pred EE
Confidence 64
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=8.1e-73 Score=527.59 Aligned_cols=238 Identities=42% Similarity=0.710 Sum_probs=228.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcC--CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~--~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
|| +||||||||||||.++|+++++ +++++|+|||+ .++++++|||+|||+||+|. ++++++++ .|.++|+.|.+
T Consensus 1 M~-ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~-~d~~~~a~ll~yds~~G~~~-~~v~~~~~-~l~v~g~~i~v 76 (380)
T 2d2i_A 1 MT-IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKI 76 (380)
T ss_dssp CC-EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEE
T ss_pred CC-cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC-CCHHHHHHhhcccccCCCCC-CcEEEeCC-eEEECCeEEEE
Confidence 54 8999999999999999999988 88999999997 69999999999999999999 99999998 99999999999
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCC-CC-eEEeecCccccCC-CCCeEEcCCch
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNENEYKP-ELNIVSNASCT 155 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p-~vV~gVN~~~~~~-~~~IIS~asCt 155 (252)
++++||++++|++.++|+||||||.|.++++++.|+++||||||||+|++| +| +||||||++.|++ .++||||||||
T Consensus 77 ~~~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCt 156 (380)
T 2d2i_A 77 VCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCT 156 (380)
T ss_dssp ECCSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHH
T ss_pred EecCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchH
Confidence 999999999998889999999999999999999999999999999999887 68 9999999999997 47899999999
Q ss_pred hhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEE
Q 025476 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLAD 235 (252)
Q Consensus 156 T~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~ 235 (252)
||||+|++|+||++|||++++|||||++|++|+++|++ +++||++|++++||||++||++++++|+||||+||++++|+
T Consensus 157 Tn~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~-~~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~av 235 (380)
T 2d2i_A 157 TNCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDAS-HRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIAL 235 (380)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCC-CSSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEE
T ss_pred HHHHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccc-hhhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEE
Confidence 99999999999999999999999999999999999998 58999999999999999999999999999999999999999
Q ss_pred Ecccchhh
Q 025476 236 RSLLSTVI 243 (252)
Q Consensus 236 rVP~~~~~ 243 (252)
|||++.++
T Consensus 236 RVPt~~gs 243 (380)
T 2d2i_A 236 RVPTPNVS 243 (380)
T ss_dssp EESCSSCE
T ss_pred EeccCCEE
Confidence 99998765
No 14
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=2.1e-71 Score=512.48 Aligned_cols=238 Identities=42% Similarity=0.711 Sum_probs=228.6
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcC--CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~--~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
|| +||||||||||||.++|+++++ +++++++|||+ .++++++|||+|||+||+|. ++++++++ .|.++|+.+.+
T Consensus 1 M~-ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~-~~~~~~~~l~~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v 76 (339)
T 3b1j_A 1 MT-IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKI 76 (339)
T ss_dssp CC-EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEE
T ss_pred Cc-eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC-CCHHHHHHHhccccccCCCC-CcEEEcCC-eeeecCceEEE
Confidence 54 8999999999999999999988 89999999997 69999999999999999999 99999998 99999999999
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCC-CC-eEEeecCccccCC-CCCeEEcCCch
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNENEYKP-ELNIVSNASCT 155 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p-~vV~gVN~~~~~~-~~~IIS~asCt 155 (252)
++++||++++|++.++|+||||||.|.++++++.|+++|+||||||+|++| +| ++|||||++.|++ .++||||||||
T Consensus 77 ~~~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCt 156 (339)
T 3b1j_A 77 VCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCT 156 (339)
T ss_dssp ECCSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHH
T ss_pred EecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcch
Confidence 999999999999889999999999999999999999999999999999876 68 9999999999997 47899999999
Q ss_pred hhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEE
Q 025476 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLAD 235 (252)
Q Consensus 156 T~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~ 235 (252)
||||+|++||||++|||++++|||||++|++|+++|++ ++|||++|++++||||++||++++++|++|+|+||++++|+
T Consensus 157 Tn~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~-~~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~ 235 (339)
T 3b1j_A 157 TNCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDAS-HRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIAL 235 (339)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCC-CSSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEE
T ss_pred hhHHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccc-hhhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEE
Confidence 99999999999999999999999999999999999998 58999999999999999999999999999999999999999
Q ss_pred Ecccchhh
Q 025476 236 RSLLSTVI 243 (252)
Q Consensus 236 rVP~~~~~ 243 (252)
|||++.++
T Consensus 236 rVP~~~g~ 243 (339)
T 3b1j_A 236 RVPTPNVS 243 (339)
T ss_dssp EESCSSCE
T ss_pred EeccCCEE
Confidence 99999875
No 15
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=2.9e-71 Score=510.84 Aligned_cols=236 Identities=44% Similarity=0.709 Sum_probs=226.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcC--CCceEEEEeCCCCChhhhheeeeeecccccCCCcceE-EcCCeeeEECCeeEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELK-VKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~--~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~-~~~~~~l~i~G~~i~v~~ 80 (252)
+||||||||||||.++|+++++ |++|+++|||+ +++++++|||+|||+||+|. +++. ++++ .|.++|+.+.+++
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~-~~~~~~a~ll~sds~~G~~~-~~v~~~~~~-~l~v~g~~i~v~~ 78 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFD-ADVKTAGDS-AISVDGKVIKVVS 78 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCS-SCEEECTTS-EEEETTEEEEEEC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC-CCHHHHHHHhcccccCCCcc-ceeEEecCC-eEEECCeEEEEEe
Confidence 7999999999999999999998 89999999995 79999999999999999999 8998 6677 8999999999999
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCC-CCeEEeecCccccCCCCCeEEcCCchhhhH
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCL 159 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~vV~gVN~~~~~~~~~IIS~asCtT~~L 159 (252)
++||++++|++.++|+||||||.|.++++++.|+++|||+|++|+|+.| +|+||||||++.|++.++||||||||||||
T Consensus 79 ~~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~l 158 (337)
T 1rm4_O 79 DRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCL 158 (337)
T ss_dssp CSCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHH
T ss_pred cCChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHH
Confidence 9999999999889999999999999999999999999999999999876 799999999999986678999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEccc
Q 025476 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLL 239 (252)
Q Consensus 160 ap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~ 239 (252)
+|++|+||++|||++++|||||++|++|+++|++ ++|||++|++++||||++||++++++|++|||+||++++|+|||+
T Consensus 159 ap~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~-~~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP~ 237 (337)
T 1rm4_O 159 APFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDAS-HRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPT 237 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCC-CSSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEESC
T ss_pred HHHHHHHHHhcCeeEEEEEEEEecCCccchhhcc-hhhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEecC
Confidence 9999999999999999999999999999999997 599999999999999999999999999999999999999999999
Q ss_pred chhh
Q 025476 240 STVI 243 (252)
Q Consensus 240 ~~~~ 243 (252)
+.++
T Consensus 238 ~~gs 241 (337)
T 1rm4_O 238 PNVS 241 (337)
T ss_dssp SSCE
T ss_pred CCEE
Confidence 8775
No 16
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=1.7e-70 Score=505.46 Aligned_cols=236 Identities=50% Similarity=0.776 Sum_probs=227.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~d 83 (252)
+||||||||||||.++|++++++++++++|||. .++++++|||+|||+||+|+ ++++++++ +|.++|+.+.+++++|
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~-~~~~~~~~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLD-AEVSVNGN-NLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC-CCHHHHHHHhccCCcCCCcC-ceEEEccC-cEEECCEEEEEEecCC
Confidence 699999999999999999999999999999996 69999999999999999999 99999998 9999999999998899
Q ss_pred CCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCC-CCeEEeecCccccCC-CCCeEEcCCchhhhHHH
Q 025476 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (252)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~vV~gVN~~~~~~-~~~IIS~asCtT~~Lap 161 (252)
|++++|++.++|+||||||.|.++++++.|+++||||||||+|++| +|++|||||++.|++ ..+||||||||||||+|
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap 158 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAP 158 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999887 799999999999986 37899999999999999
Q ss_pred HHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEcccch
Q 025476 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLLST 241 (252)
Q Consensus 162 ~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~~~ 241 (252)
++||||++|||++++|||||++|++|+++|++ +++||++|++++||||++||++++++|+||+|+||++++|+|||++.
T Consensus 159 ~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~-~~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~ 237 (334)
T 3cmc_O 159 FAKVLHEQFGIVRGMMTTVHSYTNDQRILDLP-HKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPN 237 (334)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHhcCceeeeEEEEEeccchhhhcccc-ccccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCCC
Confidence 99999999999999999999999999999998 58999999999999999999999999999999999999999999997
Q ss_pred hh
Q 025476 242 VI 243 (252)
Q Consensus 242 ~~ 243 (252)
++
T Consensus 238 gs 239 (334)
T 3cmc_O 238 VS 239 (334)
T ss_dssp CE
T ss_pred EE
Confidence 75
No 17
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=1.2e-70 Score=509.47 Aligned_cols=240 Identities=59% Similarity=0.947 Sum_probs=226.9
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
+++||||||||||||.++|+++++|++|+|+||||..++++++|||+|||+||+|+ +.++++++ +|.+||+.|.++++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~-~~v~~~~~-~l~v~g~~i~v~~~ 93 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFN-GTVEVSGK-DLCINGKVVKVFQA 93 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCS-SCEEECC--CEEETTEEEEEECC
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCC-CcEEEeCC-EEEECCeEEEEEec
Confidence 34799999999999999999999999999999997789999999999999999999 99999998 99999999999999
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCC-CCeEEeecCccccCCC-CCeEEcCCchhhhH
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPE-LNIVSNASCTTNCL 159 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~vV~gVN~~~~~~~-~~IIS~asCtT~~L 159 (252)
+||++++|++.++|+||||||.|.++++++.|+++||||||||+|++| +|++|||||++.|++. .+||||||||||||
T Consensus 94 ~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~l 173 (354)
T 3cps_A 94 KDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCL 173 (354)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred CChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHHH
Confidence 999999998889999999999999999999999999999999999876 7999999999999964 78999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCC--CcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEc
Q 025476 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSS--KDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRS 237 (252)
Q Consensus 160 ap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~--~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rV 237 (252)
+|+++||+++|||++++|||||++|++|+.+|++.. ++||++|++++||||+++|+++++.|+||+|+||++++++||
T Consensus 174 ap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a~rV 253 (354)
T 3cps_A 174 APLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRV 253 (354)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEEEEE
T ss_pred HHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEEEEe
Confidence 999999999999999999999999999999999842 799999999999999999999999999999999999999999
Q ss_pred ccchhh
Q 025476 238 LLSTVI 243 (252)
Q Consensus 238 P~~~~~ 243 (252)
|++.++
T Consensus 254 P~~~gs 259 (354)
T 3cps_A 254 PTPDVS 259 (354)
T ss_dssp SCSSCE
T ss_pred ccCCEE
Confidence 998775
No 18
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=5.8e-70 Score=502.64 Aligned_cols=242 Identities=79% Similarity=1.203 Sum_probs=229.0
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEE-cCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKV-KDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~-~~~~~l~i~G~~i~v~ 79 (252)
||++||||||||||||.++|++.+++++++++|||++.++++++|||+|||+||+|+.+.+++ +++ .|.+||+.+.++
T Consensus 1 mm~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~-~l~~~g~~i~v~ 79 (337)
T 3e5r_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSK-TLLLGEKPVTVF 79 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSS-EEEETTEEEEEE
T ss_pred CCceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCC-eeEECCeEEEEE
Confidence 777899999999999999999999999999999997679999999999999999986236777 777 899999999999
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCCCCeEEeecCccccCCCCCeEEcCCchhhhH
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCL 159 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~vV~gVN~~~~~~~~~IIS~asCtT~~L 159 (252)
+++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++|.|++|||||++.|++..+||||||||||||
T Consensus 80 ~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l 159 (337)
T 3e5r_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 159 (337)
T ss_dssp CCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred ecCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHH
Confidence 98999999998889999999999999999999999999999999999988999999999999986678999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEccc
Q 025476 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLL 239 (252)
Q Consensus 160 ap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~ 239 (252)
+|+++||+++|||+++.|||+|++|++|+.+|+++.++||++|++++||||+++|+++++.|+||+|+||++++++|||+
T Consensus 160 a~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~ 239 (337)
T 3e5r_O 160 APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPT 239 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEEESC
T ss_pred HHHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEEecc
Confidence 99999999999999999999999999999999986579999999999999999999999999999999999999999999
Q ss_pred chhh
Q 025476 240 STVI 243 (252)
Q Consensus 240 ~~~~ 243 (252)
+.++
T Consensus 240 ~~g~ 243 (337)
T 3e5r_O 240 VDVS 243 (337)
T ss_dssp SSCE
T ss_pred CCeE
Confidence 8775
No 19
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=1e-69 Score=500.62 Aligned_cols=241 Identities=61% Similarity=0.982 Sum_probs=230.0
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
||++||||||||||||.++|++.+++++++++|||++.++++++||++|||+||+|. ++++++++ .|.+||+.|++++
T Consensus 1 mM~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~-~~~~~~~~-~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFH-GTVKAENG-KLVINGNPITIFQ 78 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEEC
T ss_pred CCceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCC-CceEEcCC-eEEECCeEEEEEe
Confidence 777899999999999999999998899999999997679999999999999999999 99999998 9999999999999
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCCCCeEEeecCccccCCCCCeEEcCCchhhhHH
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~vV~gVN~~~~~~~~~IIS~asCtT~~La 160 (252)
++||++++|++.++|+||||||.|.+++.++.|+++|+|+|++|+|++|.|++|||||++.|++..+||||||||||||+
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~ 158 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLA 158 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHH
Confidence 99999999998899999999999999999999999999999999998889999999999999866789999999999999
Q ss_pred HHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEcccc
Q 025476 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLLS 240 (252)
Q Consensus 161 p~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~~ 240 (252)
|+++||+++|||++++|||+|++|++|+.+|+++.++||++|++++||||+++|+++++.|+||||+||++++++|||++
T Consensus 159 ~~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 238 (335)
T 1u8f_O 159 PLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTA 238 (335)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEESCS
T ss_pred HHHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEeccC
Confidence 99999999999999999999999999999999854899999999999999999999999999999999999999999999
Q ss_pred hhh
Q 025476 241 TVI 243 (252)
Q Consensus 241 ~~~ 243 (252)
.++
T Consensus 239 ~g~ 241 (335)
T 1u8f_O 239 NVS 241 (335)
T ss_dssp SCE
T ss_pred CEE
Confidence 875
No 20
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.3e-69 Score=497.59 Aligned_cols=236 Identities=46% Similarity=0.757 Sum_probs=227.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcC--CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~--~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
+||||||||||||.++|+++++ |++++++|||. .++++++|||+|||+||+|. ++++++++ .|.++|+.+.++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~ 77 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFP-GKVEYTEN-SLIVDGKEIKVFAE 77 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCS-SCEEECSS-EEEETTEEEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC-CChHHhhhhccCcCcCCCcC-CcEEEcCC-EEEECCeEEEEEec
Confidence 5899999999999999999988 89999999995 69999999999999999999 99999998 99999999999988
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCCCC-eEEeecCccccCCCCCeEEcCCchhhhHH
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNENEYKPELNIVSNASCTTNCLA 160 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d~p-~vV~gVN~~~~~~~~~IIS~asCtT~~La 160 (252)
+||++++|++.++|+||||||.|.++++++.|+++||||||||+|++|+| ++|||||++.|++..+||||||||||||+
T Consensus 78 ~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~la 157 (332)
T 1hdg_O 78 PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIA 157 (332)
T ss_dssp SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred CChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHH
Confidence 99999999988999999999999999999999999999999999998889 99999999999865789999999999999
Q ss_pred HHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEcccc
Q 025476 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLLS 240 (252)
Q Consensus 161 p~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~~ 240 (252)
|+++||+++|||+++.|||||++|++|+++|+| +++||++|++++||||++||++++++|+||+|+||++++|+|||++
T Consensus 158 p~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~-~~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~ 236 (332)
T 1hdg_O 158 PIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLP-HKDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTP 236 (332)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCeeEeEEEEEEeccchhhhhcCc-ccccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEcccc
Confidence 999999999999999999999999999999998 5899999999999999999999999999999999999999999999
Q ss_pred hhh
Q 025476 241 TVI 243 (252)
Q Consensus 241 ~~~ 243 (252)
.++
T Consensus 237 ~g~ 239 (332)
T 1hdg_O 237 DGS 239 (332)
T ss_dssp SCE
T ss_pred CcE
Confidence 875
No 21
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=4.9e-69 Score=496.79 Aligned_cols=238 Identities=38% Similarity=0.637 Sum_probs=217.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHHc---CCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~---~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~ 77 (252)
|| +||||||||+|||.++|++.+ ++++++++|||. .++++++|||+|||+||+|. ++++++++ +|.++|+.++
T Consensus 1 M~-ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~ 76 (339)
T 2x5j_O 1 MT-VRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFA-WEVRQERD-QLFVGDDAIR 76 (339)
T ss_dssp -C-EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEE
T ss_pred CC-eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCC-ceEEEcCC-eeEECCEEEE
Confidence 54 899999999999999999998 888999999997 69999999999999999999 99999998 9999999999
Q ss_pred EEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCC-CCCC-eEEeecCccccCCCCCeEEcCCch
Q 025476 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAP-MFVVGVNENEYKPELNIVSNASCT 155 (252)
Q Consensus 78 v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps-~d~p-~vV~gVN~~~~~~~~~IIS~asCt 155 (252)
+++++||++++|++.++|+||||||.|.++++++.|+++|+||||||+|+ .|+| ++|||||++.|++..+||||||||
T Consensus 77 v~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCt 156 (339)
T 2x5j_O 77 VLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCT 156 (339)
T ss_dssp EECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHH
T ss_pred EEecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcH
Confidence 99889999999988899999999999999999999999999999999998 6788 999999999998656899999999
Q ss_pred hhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEE
Q 025476 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLAD 235 (252)
Q Consensus 156 T~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~ 235 (252)
||||+|++||||++|||++++|||||++|++|+++|++ ++|||++|++++||||++||++++++|+||+|+||++++++
T Consensus 157 tn~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~-~~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~ 235 (339)
T 2x5j_O 157 TNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAY-HPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAV 235 (339)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEECCC------------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEE
T ss_pred HHHHHHHHHHHHHccCcceeeEEEEEeccccccccccc-cccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEE
Confidence 99999999999999999999999999999999999987 48999999999999999999999999999999999999999
Q ss_pred Ecccchhh
Q 025476 236 RSLLSTVI 243 (252)
Q Consensus 236 rVP~~~~~ 243 (252)
|||++.++
T Consensus 236 rVP~~~g~ 243 (339)
T 2x5j_O 236 RVPTINVT 243 (339)
T ss_dssp ECSSCSCE
T ss_pred EecccCcE
Confidence 99999875
No 22
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=1.4e-68 Score=492.18 Aligned_cols=236 Identities=56% Similarity=0.888 Sum_probs=227.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~d 83 (252)
+||||||||||||.++|++++++++++++|||. .++++++|||+|||+||+|+ ++++++++ .|.+||+.|++++++|
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~-~~~~~~a~l~~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFD-GTVEVKDG-HLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC-CChhHHhHhhcccccCCCCC-CeEEEcCC-EEEECCEEEEEEEcCC
Confidence 799999999999999999999999999999995 69999999999999999999 99999998 9999999999999999
Q ss_pred CCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCC-CCeEEeecCccccCCCCCeEEcCCchhhhHHHH
Q 025476 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCLAPL 162 (252)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~vV~gVN~~~~~~~~~IIS~asCtT~~Lap~ 162 (252)
|++++|++.++|+||||||.|.++++++.|+++|+|+|++|+|++| .|++|||||++.|+ ..+||||||||||||+|+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~ 157 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPL 157 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHH
Confidence 9999998889999999999999999999999999999999999854 79999999999998 688999999999999999
Q ss_pred HHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCchHHHHHHHhccCCCceeEEEEEcccchh
Q 025476 163 AKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKVFFSRLRMFVVLLWSLADRSLLSTV 242 (252)
Q Consensus 163 lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tgaa~~~~kvip~l~gkl~~~a~rVP~~~~ 242 (252)
++|||++|||+++.|||||++|++|+.+|+++.++||++|++++||+|+++|+++++.|+||+|+||++++|+|||++.+
T Consensus 158 lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g 237 (330)
T 1gad_O 158 AKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 237 (330)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCSSC
T ss_pred HHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEeccccE
Confidence 99999999999999999999999999999986689999999999999999999999999999999999999999999987
Q ss_pred h
Q 025476 243 I 243 (252)
Q Consensus 243 ~ 243 (252)
+
T Consensus 238 ~ 238 (330)
T 1gad_O 238 S 238 (330)
T ss_dssp E
T ss_pred E
Confidence 5
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.2e-55 Score=407.93 Aligned_cols=213 Identities=19% Similarity=0.171 Sum_probs=190.2
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeee--cccccC--CCcce-EEcCCeeeEECCee
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQW--KHHEL-KVKDDKTLLFGEKP 75 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~yd--S~~G~~--~~~~v-~~~~~~~l~i~G~~ 75 (252)
|| +||||||||||||.++|++.+++++++++|||. ++++++||++|| |+||+| + +++ +++++ .+.++|
T Consensus 1 Mm-ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~--~~~~~~~l~~~dg~s~~g~~~~~-~~v~~~~~~-~l~v~~-- 73 (343)
T 2yyy_A 1 MP-AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT--KPDFEARLAVEKGYKLFVAIPDN-ERVKLFEDA-GIPVEG-- 73 (343)
T ss_dssp -C-EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSCCH-HHHHHHHHT-TCCCCC--
T ss_pred Cc-eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC--CHHHHHHHHHhcCCccccccCCC-ceeecccCC-eEEECC--
Confidence 66 899999999999999999999888999999997 599999999999 999999 5 455 55666 677766
Q ss_pred EEEEeecCCCCCCCcccCccEEEecCCCCCCHHhHH-HHHhCCCCEEEEcCCCC-C-CC-eEEeecCccccCCCCCeEEc
Q 025476 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAA-AHLKGGAKKVIISAPSK-D-AP-MFVVGVNENEYKPELNIVSN 151 (252)
Q Consensus 76 i~v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~-~h~~~GakkViis~ps~-d-~p-~vV~gVN~~~~~~~~~IIS~ 151 (252)
++.++.| ++|+||||||.+.+.++++ .|+++| ++||+|+|.+ | +| +||||||++.|++ ++||||
T Consensus 74 -------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn 141 (343)
T 2yyy_A 74 -------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRV 141 (343)
T ss_dssp -------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEE
T ss_pred -------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc-CCEEec
Confidence 3444446 7999999999999999996 999999 5699999876 5 78 9999999999985 789999
Q ss_pred CCchhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecC----CCchHHHHHHHhccCC
Q 025476 152 ASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS----STGAAKVFFSRLRMFV 227 (252)
Q Consensus 152 asCtT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~----~tgaa~~~~kvip~l~ 227 (252)
||||||||+|++|+||++|||++++|||||++|+ + ++++|++++||||+ .+|++++++|++|+|+
T Consensus 142 ~sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg-------~----~~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~ 210 (343)
T 2yyy_A 142 VSCNTTGLCRILYAINSIADIKKARIVLVRRAAD-------P----NDDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFE 210 (343)
T ss_dssp CCHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSC-------T----TCSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGT
T ss_pred cchhhHHHHHHHHHHHHHcCceEEEEEeeeeccC-------c----CcchhhHHhcccCCCCCCCCcchHHHHHhhhccc
Confidence 9999999999999999999999999999999998 2 25678999999999 9999999999999999
Q ss_pred CceeEEEEEcccchhh
Q 025476 228 VLLWSLADRSLLSTVI 243 (252)
Q Consensus 228 gkl~~~a~rVP~~~~~ 243 (252)
||++++|+||||..+.
T Consensus 211 gkl~~~avRVPv~~gh 226 (343)
T 2yyy_A 211 GKILTSAVIVPTTLMH 226 (343)
T ss_dssp TSEEEEEEEESCSSCE
T ss_pred cceeeEEEEecccceE
Confidence 9999999999998764
No 24
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=2.4e-43 Score=324.25 Aligned_cols=206 Identities=21% Similarity=0.290 Sum_probs=175.6
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
|||+|+| +|++|+.++|.+.+++ ++.+.+ +++.. .+.+++ .+.++|+.+.++..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~-~~~~~l-----------~~~~s-----------~~~~g~-~l~~~g~~i~v~~~- 55 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARN-FPLSEL-----------RLYAS-----------PRSAGV-RLAFRGEEIPVEPL- 55 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT-CCCSCC-----------EEEEC-----------GGGSSC-EEEETTEEEEEEEC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CCcEEE-----------EEeec-----------cccCCC-EEEEcCceEEEEeC-
Confidence 4899999 9999999999998664 431111 34421 123455 89999999999765
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-----CCCeEEeecCccccCCCCCeEEcCCchhh
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPELNIVSNASCTTN 157 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~vV~gVN~~~~~~~~~IIS~asCtT~ 157 (252)
+|+ +| ++|+||+|+|.|.++++++.|+++|+ ++|+.+++ |.|++|||||++.|++..+|||||||+||
T Consensus 56 ~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt 128 (331)
T 2yv3_A 56 PEG--PL---PVDLVLASAGGGISRAKALVWAEGGA--LVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTA 128 (331)
T ss_dssp CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTC--EEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHH
T ss_pred Chh--hc---CCCEEEECCCccchHHHHHHHHHCCC--EEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHH
Confidence 565 58 89999999999999999999999999 56666654 57999999999999864679999999999
Q ss_pred hHHHHHHHHHhhcCeeEEEEEEEeecCCC------------cccccCCCCCcccccccccceeecCC--------CchHH
Q 025476 158 CLAPLAKVIHDKFGIVEGLMTTVHSITAT------------QKTVDGPSSKDWRGGRAASFNIIPSS--------TGAAK 217 (252)
Q Consensus 158 ~Lap~lk~L~~~fgI~~~~~tTvha~t~~------------q~~~D~~~~~~~r~~r~~a~nIiP~~--------tgaa~ 217 (252)
|++|+++||+++|||+++.|||+|++|++ |+++|++..++|+++|++++||+|++ |+.++
T Consensus 129 ~~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~ 208 (331)
T 2yv3_A 129 ILAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEM 208 (331)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHH
T ss_pred HHHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHH
Confidence 99999999999999999999999999999 99999877789999999999999998 77766
Q ss_pred HH----HHHh--ccCCCceeEEEEEcccchhh
Q 025476 218 VF----FSRL--RMFVVLLWSLADRSLLSTVI 243 (252)
Q Consensus 218 ~~----~kvi--p~l~gkl~~~a~rVP~~~~~ 243 (252)
.+ +|++ |++ +++++|+|||+...+
T Consensus 209 ~i~~e~~kil~~~~l--~v~~~~~rVP~~~g~ 238 (331)
T 2yv3_A 209 KVVWETHKIFGDDTI--RISATAVRVPTLRAH 238 (331)
T ss_dssp HHHHHHHHHTTCTTC--EEEEECCBCSCSSEE
T ss_pred HHHHHHHHHhCCCCc--eEEEEEEEeccCceE
Confidence 67 9998 888 599999999998765
No 25
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=9.9e-42 Score=314.05 Aligned_cols=210 Identities=23% Similarity=0.230 Sum_probs=162.6
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcC--CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEE
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~--~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~ 77 (252)
|+++||+|+| +|+||+.++|.+.++ ++++++++++.. + .+. .+.++|+.+.
T Consensus 1 ~~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~-------------~------------~G~-~~~~~~~~i~ 54 (336)
T 2r00_A 1 SQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER-------------S------------EGK-TYRFNGKTVR 54 (336)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-------------T------------TTC-EEEETTEEEE
T ss_pred CCccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC-------------C------------CCC-ceeecCceeE
Confidence 3348999999 999999999999988 789999998751 0 122 5557777777
Q ss_pred EEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-----CCCeEEeecCccccCCC--CCeEE
Q 025476 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--LNIVS 150 (252)
Q Consensus 78 v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~vV~gVN~~~~~~~--~~IIS 150 (252)
+ ++.+++ +|. ++|+||+|+|.+.+++.++.|+++|+ ++|+.+++ +.|++|||||++.|++. .+|||
T Consensus 55 ~-~~~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIa 127 (336)
T 2r00_A 55 V-QNVEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGV--VVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIA 127 (336)
T ss_dssp E-EEGGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEE
T ss_pred E-ecCChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCC--EEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEE
Confidence 7 345554 785 89999999999999999999999999 45555543 57999999999999852 67999
Q ss_pred cCCchhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcc-cccCCCC-----------CcccccccccceeecCCC-----
Q 025476 151 NASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGPSS-----------KDWRGGRAASFNIIPSST----- 213 (252)
Q Consensus 151 ~asCtT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~-~~D~~~~-----------~~~r~~r~~a~nIiP~~t----- 213 (252)
||||+|||++|+++||+++|||+++.|||+|++|++|+ .+|++.. .+++++|++++|++|+++
T Consensus 128 np~C~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~ 207 (336)
T 2r00_A 128 NPNCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDN 207 (336)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCS
T ss_pred CCChHHHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccC
Confidence 99999999999999999999999999999999999975 7886532 378999999999999974
Q ss_pred c-------hHHHHHHHhccCCCceeEEEEEcccchhh
Q 025476 214 G-------AAKVFFSRLRMFVVLLWSLADRSLLSTVI 243 (252)
Q Consensus 214 g-------aa~~~~kvip~l~gkl~~~a~rVP~~~~~ 243 (252)
| ..++++|++|+++++++++|+|||+...+
T Consensus 208 gh~~Ee~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~ 244 (336)
T 2r00_A 208 GYTKEEMKMVWETQKIFNDPSIMVNPTCVRVPVFYGH 244 (336)
T ss_dssp SCBHHHHHHHHHHHHHTTCTTCEEEEEEEEESSCBSE
T ss_pred CccHHHHHHHHHHHHHhCCCCCcEEEEeEEeccCcEE
Confidence 7 46677899999999999999999998765
No 26
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2e-42 Score=318.82 Aligned_cols=208 Identities=20% Similarity=0.206 Sum_probs=178.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeee--cccccCCCcce-EEcCCeeeEECCeeEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHEL-KVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~yd--S~~G~~~~~~v-~~~~~~~l~i~G~~i~v~~ 80 (252)
+||||+|+|+||+.++|++.+.+++++++++|. ++++.+++++|| ++||+|+ +.+ ..++. .+.+++.
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~l~v~~~------ 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT--RPDFEARMALKKGYDLYVAIP-ERVKLFEKA-GIEVAGT------ 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHT-TCCCCEE------
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC--ChhHHHHhcCCcchhhccccc-cceeeecCC-ceEEcCC------
Confidence 699999999999999999998889999999997 678888999988 8999988 654 34444 4555532
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-CC--CeEEeecCccccCCCCCeEEcCCchhh
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DA--PMFVVGVNENEYKPELNIVSNASCTTN 157 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-d~--p~vV~gVN~~~~~~~~~IIS~asCtT~ 157 (252)
++++.| ++|+||+|||.+.+.+.++.|+++|++ ||+++|.+ |. |++|||||++.+++ .+|||||||+|+
T Consensus 72 ---~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~tt 143 (337)
T 1cf2_P 72 ---VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNTT 143 (337)
T ss_dssp ---HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHHH
T ss_pred ---HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHHH
Confidence 222223 799999999999999999999999964 88877764 33 99999999999984 689999999999
Q ss_pred hHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecC----CCchHHHHHHHhccCCCceeEE
Q 025476 158 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS----STGAAKVFFSRLRMFVVLLWSL 233 (252)
Q Consensus 158 ~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~----~tgaa~~~~kvip~l~gkl~~~ 233 (252)
||+|+++||+++|||+++.|||||++|+ | ++++|++++||+|+ .++.+++++|+| +| +++++
T Consensus 144 ~l~~~l~pL~~~~gI~~~~vtt~~a~s~-------p----~~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l--~v~~t 209 (337)
T 1cf2_P 144 GLCRTLKPLHDSFGIKKVRAVIVRRGAD-------P----AQVSKGPINAIIPNPPKLPSHHGPDVKTVL-DI--NIDTM 209 (337)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEESSC-------T----TCTTCCCSSCCEESSSSSSCTHHHHHHTTS-CC--CEEEE
T ss_pred HHHHHHHHHHHhcCcceeEEEEEEEeec-------C----CccccchhcCEEeccCCCCCcchHHHHhhh-ee--EEEEE
Confidence 9999999999999999999999999987 2 24567899999999 688899999999 88 49999
Q ss_pred EEEcccchhh
Q 025476 234 ADRSLLSTVI 243 (252)
Q Consensus 234 a~rVP~~~~~ 243 (252)
|+|||++.++
T Consensus 210 ~~rVPv~~g~ 219 (337)
T 1cf2_P 210 AVIVPTTLMH 219 (337)
T ss_dssp EEEESCCSCE
T ss_pred EEEcCccCeE
Confidence 9999999876
No 27
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=6.7e-41 Score=308.96 Aligned_cols=211 Identities=13% Similarity=0.111 Sum_probs=174.9
Q ss_pred CcceEEEEc-CChhHHHHHHHHHc--CCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 2 GKVKIGING-FGRIGRLVARVILQ--RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 2 ~~~kv~InG-~GrIGr~v~r~~~~--~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
|++||+|+| +|+||+.++|.+.+ .+.++++++++.. + . +. .+.++|+.+.+
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~-------------~-~-----------g~-~~~~~g~~i~~ 58 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE-------------S-A-----------GQ-RMGFAESSLRV 58 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT-------------T-T-----------TC-EEEETTEEEEC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC-------------C-C-----------CC-ccccCCcceEE
Confidence 458999999 99999999999984 4779999998741 0 1 12 45577777766
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC--CCCeEEeecCccccCCCC--CeEEcCCc
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--DAPMFVVGVNENEYKPEL--NIVSNASC 154 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~--d~p~vV~gVN~~~~~~~~--~IIS~asC 154 (252)
. +.+++. |. ++|+||+|+|.+.+++.++.|+++|+|.|.+|++.. +.|++|+|||++.|++.. +|||||||
T Consensus 59 ~-~~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C 133 (340)
T 2hjs_A 59 G-DVDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCA 133 (340)
T ss_dssp E-EGGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCH
T ss_pred e-cCCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCH
Confidence 4 345554 75 899999999999999999999999998766687753 368999999999998532 79999999
Q ss_pred hhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCccc-ccCCC--CCcccc---------cccccceeecCCC-----c---
Q 025476 155 TTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT-VDGPS--SKDWRG---------GRAASFNIIPSST-----G--- 214 (252)
Q Consensus 155 tT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~-~D~~~--~~~~r~---------~r~~a~nIiP~~t-----g--- 214 (252)
+|+|++|+++||+++|||+++.|||+|++|++|+. +|++. .++||+ +|++++|++|+++ |
T Consensus 134 ~tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~ 213 (340)
T 2hjs_A 134 VAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSA 213 (340)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBH
T ss_pred HHHHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCccH
Confidence 99999999999999999999999999999999974 67531 145655 4788999999987 7
Q ss_pred ----hHHHHHHHhccCCCceeEEEEEcccchhh
Q 025476 215 ----AAKVFFSRLRMFVVLLWSLADRSLLSTVI 243 (252)
Q Consensus 215 ----aa~~~~kvip~l~gkl~~~a~rVP~~~~~ 243 (252)
..++++|++|++++|++++|+|||+...+
T Consensus 214 Ee~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~ 246 (340)
T 2hjs_A 214 IERRIFAEVQALLGERIGPLNVTCIQAPVFFGD 246 (340)
T ss_dssp HHHHHHHHHHHHTGGGBCCEEEEEEECSCSSCE
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEeEEcCcCceE
Confidence 56667999999999999999999998765
No 28
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.4e-41 Score=310.82 Aligned_cols=208 Identities=20% Similarity=0.222 Sum_probs=178.7
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeee--cccccCCCcce-EEcCCeeeEECCeeEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHEL-KVKDDKTLLFGEKPVT 77 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~yd--S~~G~~~~~~v-~~~~~~~l~i~G~~i~ 77 (252)
|| +||||+|+|+||+.++|++.+.+++++++|+|. +++++.++++|| ++||+|+ +.+ ..+++ .+.+.+
T Consensus 1 M~-irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~~~v~~---- 71 (334)
T 2czc_A 1 MK-VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIPVYAASE-EFIPRFEKE-GFEVAG---- 71 (334)
T ss_dssp CC-EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHH-TCCCSC----
T ss_pred CC-cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHHHHHhcCcccccccc-ccceeccCC-ceEEcC----
Confidence 55 899999999999999999999999999999997 688889999988 8999988 554 22222 233332
Q ss_pred EEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-C-C-CeEEeecCccccCCCCCeEEcCCc
Q 025476 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-D-A-PMFVVGVNENEYKPELNIVSNASC 154 (252)
Q Consensus 78 v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-d-~-p~vV~gVN~~~~~~~~~IIS~asC 154 (252)
+++++.| ++|+|++|||.+.+.+.++.|+++| |+||+++|.+ | . |++|+|||+++|+. .++|+|+||
T Consensus 72 -----d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C 141 (334)
T 2czc_A 72 -----TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSC 141 (334)
T ss_dssp -----BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCH
T ss_pred -----cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeecccccccccceEEeccCHHHHhh-CCcEEecCc
Confidence 3334434 7999999999999999999999999 5699998865 4 3 69999999999984 689999999
Q ss_pred hhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecC---CCchHHHHHHHhccCCCcee
Q 025476 155 TTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS---STGAAKVFFSRLRMFVVLLW 231 (252)
Q Consensus 155 tT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~---~tgaa~~~~kvip~l~gkl~ 231 (252)
+|+||+|++++|++. |+++.++|+|++|++ ||++|++++||+|+ .+|+++++++++| |+ ++
T Consensus 142 ~t~~l~P~~~~l~~~--I~~g~i~ti~a~s~~-----------~~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~--l~ 205 (334)
T 2czc_A 142 NTTGLVRTLSAIREY--ADYVYAVMIRRAADP-----------NDTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN--IE 205 (334)
T ss_dssp HHHHHHHHHHHHGGG--EEEEEEEEEEESSCT-----------TCCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC--EE
T ss_pred HHHHHHHHHHHHHHH--hccccEEEEEEecCc-----------cccccChhhcEEeccCCCCchhhhhheEEE-EE--EE
Confidence 999999999999997 999999999999874 46788999999999 8999999999999 86 99
Q ss_pred EEEEEcccchhh
Q 025476 232 SLADRSLLSTVI 243 (252)
Q Consensus 232 ~~a~rVP~~~~~ 243 (252)
++|+|||+..+.
T Consensus 206 ~~~~rVPv~~~~ 217 (334)
T 2czc_A 206 TMAFVVPTTLMH 217 (334)
T ss_dssp EEEEEESCSSCE
T ss_pred EEEEEcCCCceE
Confidence 999999998765
No 29
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.1e-39 Score=300.90 Aligned_cols=205 Identities=17% Similarity=0.228 Sum_probs=166.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~d 83 (252)
+||||+|+|+||+.++|++.+++++++++|+|. ++++.+++++|+- + +++.+++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~--~~~~~~~~a~~~g----~--------------------~~~~~~~ 55 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT--SPNYEAFIAHRRG----I--------------------RIYVPQQ 55 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--SCSHHHHHHHHTT----C--------------------CEECCGG
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC--ChHHHHHHHHhcC----c--------------------ceecCcC
Confidence 799999999999999999999999999999997 5777777776421 0 1111112
Q ss_pred CCCCCCc-----------c--cCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCC--CCeEEeecCccccCCCCCe
Q 025476 84 PEEIPWA-----------E--TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD--APMFVVGVNENEYKPELNI 148 (252)
Q Consensus 84 p~~~~w~-----------~--~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d--~p~vV~gVN~~~~~~~~~I 148 (252)
|+++ |+ + .++|+||+|||.+.+++.++.|+++|+|+|.+|++..+ +++||+|+|++++.+ .++
T Consensus 56 ~~~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~i 133 (340)
T 1b7g_O 56 SIKK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKY 133 (340)
T ss_dssp GHHH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSE
T ss_pred HHHH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCC
Confidence 2222 22 1 26899999999999999999999999998888887544 479999999777653 459
Q ss_pred EEcCCchhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecC----CCchHHHHHHHhc
Q 025476 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS----STGAAKVFFSRLR 224 (252)
Q Consensus 149 IS~asCtT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~----~tgaa~~~~kvip 224 (252)
||||||+||||+|++++|+++|||+++.|||+|+++. + +++ .|++.+||+|+ .+++++++.+++|
T Consensus 134 IsnpsCtt~~l~~~lk~L~~~~gI~~~~~tt~~~~~~-------~-~~~---~~~~~~niip~~~~i~t~~a~ev~~vlp 202 (340)
T 1b7g_O 134 IRVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAAD-------Q-KEV---KKGPINSLVPDPATVPSHHAKDVNSVIR 202 (340)
T ss_dssp EEECCHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSC-------T-TCC---SCCCSSCCEESSSSSSCTHHHHHHTTST
T ss_pred cccCCcHHHHHHHHHHHHHHhCCeEEEEEEEEeccCC-------c-ccc---hHHHHcCCCCCCcCCCCCchhHHHHhCC
Confidence 9999999999999999999999999999999998852 2 233 45788999988 6899999999999
Q ss_pred cCCCceeEEEEEcccchhh-hcccce
Q 025476 225 MFVVLLWSLADRSLLSTVI-RSMNVK 249 (252)
Q Consensus 225 ~l~gkl~~~a~rVP~~~~~-~~~~~~ 249 (252)
+|+ ++++|+|||+..+. .+.+++
T Consensus 203 ~l~--l~~~a~rVPv~~gh~~~l~v~ 226 (340)
T 1b7g_O 203 NLD--IATMAVIAPTTLMHMHFINIT 226 (340)
T ss_dssp TCE--EEEEEEEESCSSCEEEEEEEE
T ss_pred CCc--EEEEEEEeccCCeEEEEEEEE
Confidence 995 99999999998764 333443
No 30
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=4.2e-40 Score=306.60 Aligned_cols=213 Identities=16% Similarity=0.131 Sum_probs=173.7
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
+||||+| +|++|+.++|+++++.+++++.+ |+|+||| +|+-- . .++|+.+.+....
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i-----------~~~~~~s-~G~~v----~-------~~~g~~i~~~~~~ 58 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRP-----------VFFSTSQ-LGQAA----P-------SFGGTTGTLQDAF 58 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEE-----------EEEESSS-TTSBC----C-------GGGTCCCBCEETT
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEE-----------EEEEeCC-CCCCc----c-------ccCCCceEEEecC
Confidence 5999999 99999999995444433543333 7888886 77522 0 1445666665544
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-----CCCeEEeecCccccCCC--C--CeEEcCC
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--L--NIVSNAS 153 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~vV~gVN~~~~~~~--~--~IIS~as 153 (252)
++++ |. ++|+||+|+|.+.+++.++.|+++|+|++|||++++ |.|++|+|||++.|++. . ++|||||
T Consensus 59 ~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp~ 134 (367)
T 1t4b_A 59 DLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGN 134 (367)
T ss_dssp CHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeCC
Confidence 5544 75 899999999999999999999999999899999975 67999999999999752 2 6999999
Q ss_pred chhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCccc-------------------ccCCCCC---cccc-----------
Q 025476 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT-------------------VDGPSSK---DWRG----------- 200 (252)
Q Consensus 154 CtT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~-------------------~D~~~~~---~~r~----------- 200 (252)
|+|+|++++++||+++|+|+++.|+|||++|++++- +|+|+ + ||||
T Consensus 135 Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~-~~ild~~r~~~~~~~~~~~ 213 (367)
T 1t4b_A 135 CTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPS-SAILDIERKVTTLTRSGEL 213 (367)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTT-CCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccc-cchhhhhhccccccccccC
Confidence 999999999999999999999999999999999432 34453 4 6665
Q ss_pred -----cccccceeecCCCc------------hHHHHHHHhcc-CCCceeEEEEEcccchhhh
Q 025476 201 -----GRAASFNIIPSSTG------------AAKVFFSRLRM-FVVLLWSLADRSLLSTVIR 244 (252)
Q Consensus 201 -----~r~~a~nIiP~~tg------------aa~~~~kvip~-l~gkl~~~a~rVP~~~~~~ 244 (252)
++.+++|++|+.++ ..++++|++|+ .+.+++++|+|||+...+-
T Consensus 214 ~~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~ 275 (367)
T 1t4b_A 214 PVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHS 275 (367)
T ss_dssp CCTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEE
T ss_pred cccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEE
Confidence 68999999999988 88899999976 5668999999999987653
No 31
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.6e-37 Score=284.15 Aligned_cols=215 Identities=18% Similarity=0.158 Sum_probs=173.1
Q ss_pred CC-cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 1 MG-KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 1 m~-~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
|| ++||||+| +|++|+.++|.+.++++++++++++..-+.. -.||+.|+.+. ++ .+.++++.+.+
T Consensus 1 m~~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g-----~~~~~~~~~~~-------~~-~~~~~~~~~~~ 67 (350)
T 2ep5_A 1 MADKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIG-----KKYKDAVKWIE-------QG-DIPEEVQDLPI 67 (350)
T ss_dssp -CCCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTT-----SBHHHHCCCCS-------SS-SCCHHHHTCBE
T ss_pred CCCCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcC-----CCHHHhcCccc-------cc-ccccCCceeEE
Confidence 54 68999999 9999999999999999999999984211111 23678887653 12 34444455555
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-----CCCeEEeecCccccCC---------
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKP--------- 144 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~vV~gVN~~~~~~--------- 144 (252)
++.+++. |. ++|+||+|+|.+.+.+.++.|+++|+| ||+++++ |.|++|+|||++.|..
T Consensus 68 -~~~d~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~ 140 (350)
T 2ep5_A 68 -VSTNYED--HK--DVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKG 140 (350)
T ss_dssp -ECSSGGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHT
T ss_pred -eeCCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcc
Confidence 3345543 63 899999999999999999999999994 7888864 5799999999998873
Q ss_pred -CCCeEEcCCchhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCch-HHHH---
Q 025476 145 -ELNIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGA-AKVF--- 219 (252)
Q Consensus 145 -~~~IIS~asCtT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tga-a~~~--- 219 (252)
..++||||||+|+|++|+++||+++|||+++.|||+|++|++|+. ++ ..+.+++|++|+.+|. .+.+
T Consensus 141 ~~~~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~--~~------~~~~~~~ni~py~~~~e~k~~~E~ 212 (350)
T 2ep5_A 141 WKGILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYN--GI------SFMAIEGNIIPYIKGEEDKIAKEL 212 (350)
T ss_dssp CSSEEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSS--SS------BHHHHTTCCBCCCTTHHHHHHHHH
T ss_pred cCceEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCC--CC------CChHHhCCEEeccCCcchHHHHHH
Confidence 235999999999999999999999999999999999999999987 32 1457899999999985 6644
Q ss_pred HHHhccCCC--------ceeEEEEEcccchhh
Q 025476 220 FSRLRMFVV--------LLWSLADRSLLSTVI 243 (252)
Q Consensus 220 ~kvip~l~g--------kl~~~a~rVP~~~~~ 243 (252)
.|+||+|+| +++++++|||+...+
T Consensus 213 ~~~l~~~~g~~~~~~~~~v~~t~~rvP~~~g~ 244 (350)
T 2ep5_A 213 TKLNGKLENNQIIPANLDSTVTSIRVPTRVGH 244 (350)
T ss_dssp HHHTCEECSSSEECCCCEEEEEEEECSCSSCE
T ss_pred HHHHhhccccccccccccEEEEeEEecccceE
Confidence 799999877 899999999998765
No 32
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=4.4e-35 Score=271.07 Aligned_cols=216 Identities=21% Similarity=0.256 Sum_probs=168.5
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC-CCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND-PFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind-~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
||++||+|+| +|+||+.++|.+.++++++++++++ +....+ +||+.|+.+. . . .+..+++.+.+
T Consensus 6 ~M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~------~~~~~~~~~~-~------~-~~~~~~~~~~~ 71 (354)
T 1ys4_A 6 KMKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGK------KYKDACYWFQ-D------R-DIPENIKDMVV 71 (354)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTS------BHHHHSCCCC-S------S-CCCHHHHTCBC
T ss_pred cccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccc------cHHHhccccc-c------c-ccccCceeeEE
Confidence 3458999999 9999999999999889999999984 321111 2477777553 1 0 11122333334
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-----CCCeEEeecCccccCC---------
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKP--------- 144 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~vV~gVN~~~~~~--------- 144 (252)
.+.++++ |.+.++|+||+|+|.+.+.+.++.|+++|+ .|||++++ |.|++++|+|++.|..
T Consensus 72 -~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~--~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~ 146 (354)
T 1ys4_A 72 -IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGK--LIFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRG 146 (354)
T ss_dssp -EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTC--EEEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHC
T ss_pred -EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCC--EEEECCchhcCCCCCCccCcccCHHHhcChhhhhhhcc
Confidence 2345654 743589999999999999999999999999 48998864 4789999999998873
Q ss_pred -CCCeEEcCCchhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCch-HH---HH
Q 025476 145 -ELNIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGA-AK---VF 219 (252)
Q Consensus 145 -~~~IIS~asCtT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tga-a~---~~ 219 (252)
..++||||+|+|+|++|+++||+++|||+++.|+|+|++|++|+. +. . .+.+++|++|+.++. .+ ++
T Consensus 147 ~~~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~--~~---~---~~~~~~ni~py~~~~~~k~~~Ei 218 (354)
T 1ys4_A 147 WDGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYN--GV---P---SMAILDNLIPFIKNEEEKMQTES 218 (354)
T ss_dssp CSSEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTT--TS---C---HHHHTTCCBSCCTTHHHHHHHHH
T ss_pred cCCeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCcc--cc---c---chHHhCCEEeccCchhhHHHHHH
Confidence 235999999999999999999999999999999999999999887 22 1 346889999999884 33 55
Q ss_pred HHHhccCCC--------ceeEEEEEcccchhh
Q 025476 220 FSRLRMFVV--------LLWSLADRSLLSTVI 243 (252)
Q Consensus 220 ~kvip~l~g--------kl~~~a~rVP~~~~~ 243 (252)
.++|+++.| +++++++|||+...+
T Consensus 219 ~~~l~~~~g~~~~~~~~~v~~~~~rvP~~~G~ 250 (354)
T 1ys4_A 219 LKLLGTLKDGKVELANFKISASCNRVAVIDGH 250 (354)
T ss_dssp HHHTSEEETTEEECCCCEEEEECCBCSCSSCE
T ss_pred HHHHhccccccccCCCceEEEEEEEecccceE
Confidence 677887655 799999999998665
No 33
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=1.6e-34 Score=268.26 Aligned_cols=205 Identities=11% Similarity=0.091 Sum_probs=161.8
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|+++||+|+| +|+||+.++|.+.++++++++++++.. +.. .+||+.||+|. +.+ . . .+ .+
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~-~~g-----~~~~~~~~~~~-~~v--~-~-dl-------~~- 74 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR-KAG-----QSMESVFPHLR-AQK--L-P-TL-------VS- 74 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST-TTT-----SCHHHHCGGGT-TSC--C-C-CC-------BC-
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch-hcC-----CCHHHhCchhc-Ccc--c-c-cc-------ee-
Confidence 3458999999 999999999999999999999999862 222 57899999887 432 0 1 12 12
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC---CC------------------CeEEeec-
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK---DA------------------PMFVVGV- 137 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~---d~------------------p~vV~gV- 137 (252)
.+ ++ .|+ ++|+||+|+|.+.+++.++.| ++|+ ++|+.+++ ++ +.+|+|+
T Consensus 75 --~~-~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvp 145 (359)
T 1xyg_A 75 --VK-DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLT 145 (359)
T ss_dssp --GG-GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCH
T ss_pred --cc-hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECC
Confidence 11 23 585 899999999999999999999 9999 57777753 22 4678887
Q ss_pred --CccccCCCCCeEEcCCchhhhHHHHHHHHHhhcCee--EEEEEEEeecCCCccc-ccCCCCCcccccccccceeecCC
Q 025476 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSSKDWRGGRAASFNIIPSS 212 (252)
Q Consensus 138 --N~~~~~~~~~IIS~asCtT~~Lap~lk~L~~~fgI~--~~~~tTvha~t~~q~~-~D~~~~~~~r~~r~~a~nIiP~~ 212 (252)
|+++++. .+|||||||+|||++|+++||+++|+|+ ++.|+|+|++|++|+. .|.+ +.++ ++.|++|..
T Consensus 146 E~n~~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~-~~~~-----~~~ni~py~ 218 (359)
T 1xyg_A 146 EILREDIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEAN-LYSE-----IAEGISSYG 218 (359)
T ss_dssp HHHHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGG-BHHH-----HTTCCEECS
T ss_pred ccCHHHhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhh-hhHH-----HhcCeeccc
Confidence 9999984 6899999999999999999999999999 9999999999999985 6654 2333 568999998
Q ss_pred CchHHHHHHHhccCC----------CceeEEEEEcccchhhh
Q 025476 213 TGAAKVFFSRLRMFV----------VLLWSLADRSLLSTVIR 244 (252)
Q Consensus 213 tgaa~~~~kvip~l~----------gkl~~~a~rVP~~~~~~ 244 (252)
++.. +.+||+. .+++++++|||+...+-
T Consensus 219 ~~~h----~h~pEi~~~l~~~~~~~~~v~~t~~rvP~~~G~~ 256 (359)
T 1xyg_A 219 VTRH----RHVPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQ 256 (359)
T ss_dssp CSCC----THHHHHHHHHHHHHTSCCCCEEECEEESSSSCEE
T ss_pred cccc----ccHHHHHHHHHHhcCCCCCEEEEEEEecccceEE
Confidence 8742 2333333 38999999999987653
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-33 Score=260.31 Aligned_cols=204 Identities=14% Similarity=0.021 Sum_probs=160.7
Q ss_pred CC-cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 1 MG-KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 1 m~-~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
|| ++||+|+| +|+||+.++|.+.++++++++++++.. +.. .+|++.|++|. +. . .+.+
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~-~~g-----~~~~~~~~~~~-g~-----~--------~~~~ 60 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRR-FAG-----EPVHFVHPNLR-GR-----T--------NLKF 60 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCST-TTT-----SBGGGTCGGGT-TT-----C--------CCBC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECch-hhC-----chhHHhCchhc-Cc-----c--------cccc
Confidence 65 58999999 899999999999999999999999852 222 45788888776 21 1 1222
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC---CC-----------------CeEEeec-
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK---DA-----------------PMFVVGV- 137 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~---d~-----------------p~vV~gV- 137 (252)
.+++ +|. ++|+||+|+|.+.+++.++.|+++|++ +|+.+++ ++ +.+|+|+
T Consensus 61 ---~~~~--~~~--~vDvV~~a~g~~~s~~~a~~~~~aG~~--VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvp 131 (345)
T 2ozp_A 61 ---VPPE--KLE--PADILVLALPHGVFAREFDRYSALAPV--LVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVP 131 (345)
T ss_dssp ---BCGG--GCC--CCSEEEECCCTTHHHHTHHHHHTTCSE--EEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCH
T ss_pred ---cchh--Hhc--CCCEEEEcCCcHHHHHHHHHHHHCCCE--EEEcCccccCCChHHHHhhhccccchhhhccCcEecc
Confidence 1222 373 899999999999999999999999994 5655542 11 3567776
Q ss_pred --CccccCCCCCeEEcCCchhhhHHHHHHHHHhhcCee--EEEEEEEeecCCCccc-ccCCCCCcccccccccceeecCC
Q 025476 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSSKDWRGGRAASFNIIPSS 212 (252)
Q Consensus 138 --N~~~~~~~~~IIS~asCtT~~Lap~lk~L~~~fgI~--~~~~tTvha~t~~q~~-~D~~~~~~~r~~r~~a~nIiP~~ 212 (252)
|++.++. .++||||||+|+|++|+++||+++|+|+ ++.|+|+|++|++|+. .|.+ +.++ +..|++|+.
T Consensus 132 E~n~~~i~~-~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~-~~~~-----~~~n~~py~ 204 (345)
T 2ozp_A 132 ELYREALKG-ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPAS-HHPE-----RAGSIRVYK 204 (345)
T ss_dssp HHHHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGG-CHHH-----HTTCCEEEE
T ss_pred ccCHHHhhc-CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCccccccc-cchh-----hccccccCC
Confidence 9999985 6899999999999999999999999999 9999999999999965 6654 2333 568999998
Q ss_pred CchHHHHHHHhccCC-----C-ceeEEEEEcccchhhh
Q 025476 213 TGAAKVFFSRLRMFV-----V-LLWSLADRSLLSTVIR 244 (252)
Q Consensus 213 tgaa~~~~kvip~l~-----g-kl~~~a~rVP~~~~~~ 244 (252)
++. .+++||++ + +++++++|||+...+-
T Consensus 205 ~~~----h~~~pei~~~l~~~~~v~~~~~rvP~~~g~~ 238 (345)
T 2ozp_A 205 PTG----HRHTAEVVENLPGRPEVHLTAIATDRVRGIL 238 (345)
T ss_dssp CSC----CTHHHHHHHTSSSCCCEEEEEEECSCSSCEE
T ss_pred CCC----ccChHhHHHHhCCCCCeEEEEEEeccccEEE
Confidence 874 45666665 5 8999999999987653
No 35
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=99.97 E-value=1e-31 Score=249.37 Aligned_cols=214 Identities=17% Similarity=0.149 Sum_probs=158.9
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
++||||+| +|.+|+.++|.+.++|.++++.+....-.-..+... | +|. . .. .+.-+++.+.+ ++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~------~-p~~-~-----~~-~~~~~~~~~~v-~~ 71 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEV------V-RWQ-T-----VG-QVPKEIADMEI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHH------C-CCC-S-----SS-CCCHHHHTCBC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHh------c-ccc-c-----cc-ccccccccceE-Ee
Confidence 58999999 899999999999899999998885431000011000 0 000 0 00 00000112222 22
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCC---CCCCeEEeecCccccCC--C--------CCe
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS---KDAPMFVVGVNENEYKP--E--------LNI 148 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps---~d~p~vV~gVN~~~~~~--~--------~~I 148 (252)
.+++. |. ++|+||+|+|.+.+++.++.|+++|+|.|.+|++. +|.|++|||||.+.++. . .++
T Consensus 72 ~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpk_A 72 TDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 33433 43 89999999999999999999999999655555553 35799999999999853 1 259
Q ss_pred EEcCCchhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCch-HH---HHHHHhc
Q 025476 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGA-AK---VFFSRLR 224 (252)
Q Consensus 149 IS~asCtT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tga-a~---~~~kvip 224 (252)
||||+|+|+|++++|+||+++|||+++.|+|+|++|++|+. +.. .+.+++|++|+.++. .+ +++|+++
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~ 219 (359)
T 4dpk_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILS 219 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS--CSB------GGGTTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999887 221 246889999999875 44 5789999
Q ss_pred cCCC----------ceeEEEEEcccchhh
Q 025476 225 MFVV----------LLWSLADRSLLSTVI 243 (252)
Q Consensus 225 ~l~g----------kl~~~a~rVP~~~~~ 243 (252)
+++| +++++|+|||+...+
T Consensus 220 ~l~g~~~~~~~~~~~v~~t~~rVPv~rG~ 248 (359)
T 4dpk_A 220 EVKRNVDEPKLEDVSLAATTHRIATIHGH 248 (359)
T ss_dssp TSCCSCCCSCGGGCEEEEEEEECSCSSCE
T ss_pred hcccccccccccCCceEEEEEEecccccE
Confidence 9876 899999999998654
No 36
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=99.97 E-value=1e-31 Score=249.37 Aligned_cols=214 Identities=17% Similarity=0.149 Sum_probs=158.9
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
++||||+| +|.+|+.++|.+.++|.++++.+....-.-..+... | +|. . .. .+.-+++.+.+ ++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~------~-p~~-~-----~~-~~~~~~~~~~v-~~ 71 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEV------V-RWQ-T-----VG-QVPKEIADMEI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHH------C-CCC-S-----SS-CCCHHHHTCBC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHh------c-ccc-c-----cc-ccccccccceE-Ee
Confidence 58999999 899999999999899999998885431000011000 0 000 0 00 00000112222 22
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCC---CCCCeEEeecCccccCC--C--------CCe
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS---KDAPMFVVGVNENEYKP--E--------LNI 148 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps---~d~p~vV~gVN~~~~~~--~--------~~I 148 (252)
.+++. |. ++|+||+|+|.+.+++.++.|+++|+|.|.+|++. +|.|++|||||.+.++. . .++
T Consensus 72 ~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpl_A 72 TDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 33433 43 89999999999999999999999999655555553 35799999999999853 1 259
Q ss_pred EEcCCchhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCch-HH---HHHHHhc
Q 025476 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGA-AK---VFFSRLR 224 (252)
Q Consensus 149 IS~asCtT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tga-a~---~~~kvip 224 (252)
||||+|+|+|++++|+||+++|||+++.|+|+|++|++|+. +.. .+.+++|++|+.++. .+ +++|+++
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~ 219 (359)
T 4dpl_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILS 219 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS--CSB------HHHHTTCCEECCHHHHHHHHHHHHHHHT
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999887 221 246889999999875 44 5789999
Q ss_pred cCCC----------ceeEEEEEcccchhh
Q 025476 225 MFVV----------LLWSLADRSLLSTVI 243 (252)
Q Consensus 225 ~l~g----------kl~~~a~rVP~~~~~ 243 (252)
+++| +++++|+|||+...+
T Consensus 220 ~l~g~~~~~~~~~~~v~~t~~rVPv~rG~ 248 (359)
T 4dpl_A 220 EVKRNVDEPKLEDVSLAATTHRIATIHGH 248 (359)
T ss_dssp TSCCSSCCSCGGGCEEEEECEECSCSSCE
T ss_pred hcccccccccccCCceEEEEEEecccccE
Confidence 9877 899999999998654
No 37
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=99.97 E-value=2e-30 Score=241.24 Aligned_cols=209 Identities=14% Similarity=0.231 Sum_probs=158.9
Q ss_pred CcceEEEEc-CChhHHHHHHHHHcC--CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 2 GKVKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 2 ~~~kv~InG-~GrIGr~v~r~~~~~--~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
|++||||+| .|.+|+.++|.+.++ |.++++.+... +.+|. .+.+.|+.+.+
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~-------------------------~saG~-~~~~~~~~~~~ 54 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-------------------------RSAGK-SLKFKDQDITI 54 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT-------------------------TTTTC-EEEETTEEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc-------------------------ccCCC-cceecCCCceE
Confidence 348999999 899999999988887 44554444321 12344 67777877766
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCC-----CCCCeEEeecCccccCCCCCeEEcCC
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-----KDAPMFVVGVNENEYKPELNIVSNAS 153 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps-----~d~p~vV~gVN~~~~~~~~~IIS~as 153 (252)
++-+++. |. ++|+||+|+|.+.+++.++.|+++|+ ++|+.++ +|+|++|||||.+.++...++||||+
T Consensus 55 -~~~~~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpg 127 (366)
T 3pwk_A 55 -EETTETA--FE--GVDIALFSAGSSTSAKYAPYAVKAGV--VVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPN 127 (366)
T ss_dssp -EECCTTT--TT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCC
T ss_pred -eeCCHHH--hc--CCCEEEECCChHhHHHHHHHHHHCCC--EEEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCC
Confidence 3334443 43 89999999999999999999999999 4566654 35799999999999986578999999
Q ss_pred chhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCccc-c-----------cC------CCCCcc-----cccccccceeec
Q 025476 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT-V-----------DG------PSSKDW-----RGGRAASFNIIP 210 (252)
Q Consensus 154 CtT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~-~-----------D~------~~~~~~-----r~~r~~a~nIiP 210 (252)
|+|+|++++++||+++|||+++.|+|+|++|++.+- + ++ ...+.+ ++-+.+++|++|
T Consensus 128 C~tt~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP 207 (366)
T 3pwk_A 128 CSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALP 207 (366)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBC
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhccccc
Confidence 999999999999999999999999999999997542 1 11 000111 111789999999
Q ss_pred CC-----CchHHHHH-------HHhccCCCceeEEEEEcccchhh
Q 025476 211 SS-----TGAAKVFF-------SRLRMFVVLLWSLADRSLLSTVI 243 (252)
Q Consensus 211 ~~-----tgaa~~~~-------kvip~l~gkl~~~a~rVP~~~~~ 243 (252)
.. +|+++++. |++.....+++.+|+|||+..-+
T Consensus 208 ~I~~~~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~ 252 (366)
T 3pwk_A 208 QIDVFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAH 252 (366)
T ss_dssp CSSCBCTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSSCE
T ss_pred eecccccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhccE
Confidence 96 47777665 44555556899999999997654
No 38
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=99.97 E-value=2.4e-31 Score=248.25 Aligned_cols=210 Identities=16% Similarity=0.096 Sum_probs=155.9
Q ss_pred cceEEEEc-CChhHHHHHH-HHHcCC--CceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeE-ECCeeEE
Q 025476 3 KVKIGING-FGRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLL-FGEKPVT 77 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r-~~~~~~--~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~-i~G~~i~ 77 (252)
++||||+| +|.+|+.++| .+.+++ .++++.+... ..|. ++. ++|+.+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~--------------------------~aG~-~~~~~~~~~~~ 56 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS--------------------------NAGG-KAPSFAKNETT 56 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------------------CTTS-BCCTTCCSCCB
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech--------------------------hcCC-CHHHcCCCceE
Confidence 57999999 8999999999 888887 3444333221 1111 221 3444433
Q ss_pred EEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-----CCCeEEeecCccccCCC--C--Ce
Q 025476 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--L--NI 148 (252)
Q Consensus 78 v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~vV~gVN~~~~~~~--~--~I 148 (252)
+....+++. |. ++|+||+|+|.+.+++.++.|+++|+|++|||++++ |+|++|||||++.++.. + ++
T Consensus 57 v~~~~~~~~--~~--~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~ 132 (377)
T 3uw3_A 57 LKDATSIDD--LK--KCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKN 132 (377)
T ss_dssp CEETTCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCE
T ss_pred EEeCCChhH--hc--CCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcE
Confidence 422112222 43 899999999999999999999999998889999973 46999999999999642 3 35
Q ss_pred EEcCCchhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCccc------------cc-------------------------
Q 025476 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT------------VD------------------------- 191 (252)
Q Consensus 149 IS~asCtT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~------------~D------------------------- 191 (252)
||||||+|+|++|+|+||+++|||+++.|+|+|++|++.+- ++
T Consensus 133 Ianp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~ 212 (377)
T 3uw3_A 133 FIGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMN 212 (377)
T ss_dssp EEECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhcccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999997431 10
Q ss_pred CCCCCcccccccccceeecCCC-----chHH-------HHHHHhccC------CCceeEEEEEcccchhh
Q 025476 192 GPSSKDWRGGRAASFNIIPSST-----GAAK-------VFFSRLRMF------VVLLWSLADRSLLSTVI 243 (252)
Q Consensus 192 ~~~~~~~r~~r~~a~nIiP~~t-----gaa~-------~~~kvip~l------~gkl~~~a~rVP~~~~~ 243 (252)
+...+.-.+++++++|++|+.. |+++ +++|++..+ .-+++.+|+|||+..-+
T Consensus 213 ~~~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVPv~rGh 282 (377)
T 3uw3_A 213 GDAMPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIGAMRCH 282 (377)
T ss_dssp STTSCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCSBSSEE
T ss_pred ccccccccccccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEecccceE
Confidence 1111223567789999999963 4444 457777764 45799999999997654
No 39
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=99.97 E-value=2.5e-31 Score=247.51 Aligned_cols=209 Identities=17% Similarity=0.106 Sum_probs=154.6
Q ss_pred ceEEEEc-CChhHHHHHH-HHHcCC--CceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeee-EECCeeEEE
Q 025476 4 VKIGING-FGRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTL-LFGEKPVTV 78 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r-~~~~~~--~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l-~i~G~~i~v 78 (252)
|||||+| +|.+|+.++| .+.++| .++++.+... + -| . ++ .+.|+.+.+
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~--------------~-aG-----------~-~~~~~~~~~~~~ 53 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS--------------Q-IG-----------V-PAPNFGKDAGML 53 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------S-TT-----------S-BCCCSSSCCCBC
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc--------------c-cC-----------c-CHHHhCCCceEE
Confidence 5999999 8999999999 888887 3454443321 1 12 1 22 144444444
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-----CCCeEEeecCccccCCC--C--CeE
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--L--NIV 149 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~vV~gVN~~~~~~~--~--~II 149 (252)
....+++. |. ++|+||+|+|.+.+++.++.|+++|+|++|||++++ |+|++|||||++.++.. + ++|
T Consensus 54 ~~~~~~~~--~~--~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~I 129 (370)
T 3pzr_A 54 HDAFDIES--LK--QLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTF 129 (370)
T ss_dssp EETTCHHH--HT--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEE
T ss_pred EecCChhH--hc--cCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEE
Confidence 22122322 43 899999999999999999999999998899999973 57999999999999642 3 459
Q ss_pred EcCCchhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCcccc---------------------------c----------C
Q 025476 150 SNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTV---------------------------D----------G 192 (252)
Q Consensus 150 S~asCtT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~~---------------------------D----------~ 192 (252)
|||||+|+|++|+|+||+++|||+++.|+|+|++|++.+-. | +
T Consensus 130 anp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~ 209 (370)
T 3pzr_A 130 VGGNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDIDKKVAETMRS 209 (370)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHS
T ss_pred EcCChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccChhhHHHHHHHHHHhhccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999974310 0 1
Q ss_pred CCCCcccccccccceeecCCC-----chHH-------HHHHHhcc--CCCceeEEEEEcccchhh
Q 025476 193 PSSKDWRGGRAASFNIIPSST-----GAAK-------VFFSRLRM--FVVLLWSLADRSLLSTVI 243 (252)
Q Consensus 193 ~~~~~~r~~r~~a~nIiP~~t-----gaa~-------~~~kvip~--l~gkl~~~a~rVP~~~~~ 243 (252)
...+.-.+++++++|++|+.. |+++ +++|++.. -.-+++.+|+|||+..-+
T Consensus 210 ~~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vrVPv~rGh 274 (370)
T 3pzr_A 210 GSFPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCH 274 (370)
T ss_dssp TTSCCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCEESCSSEE
T ss_pred cccccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEEecccceE
Confidence 111123467789999999974 4444 44666653 234799999999997654
No 40
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=99.97 E-value=9.5e-30 Score=234.95 Aligned_cols=207 Identities=21% Similarity=0.289 Sum_probs=158.2
Q ss_pred ceEEEEc-CChhHHHHHHHHHcC--CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 4 VKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~--~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
+||||+| .|.+|+.++|.+.++ |.++++.+... + ..|. .+.++|+.+.+.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~--------------~-----------~aG~-~~~~~~~~~~~~- 54 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA--------------R-----------SQGR-KLAFRGQEIEVE- 54 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT--------------T-----------TSSC-EEEETTEEEEEE-
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc--------------c-----------cCCC-ceeecCCceEEE-
Confidence 6999999 899999999999888 44554443321 1 2344 677888777663
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCC-----CCCCeEEeecCc-cccCCC-CCeEEcCC
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-----KDAPMFVVGVNE-NEYKPE-LNIVSNAS 153 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps-----~d~p~vV~gVN~-~~~~~~-~~IIS~as 153 (252)
+.+++ .|. ++|+||+|+|.+.+++.++.|+++|+ +||+.++ +|+|++|||||+ +.++.. .+|||||+
T Consensus 55 ~~~~~--~~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpg 128 (344)
T 3tz6_A 55 DAETA--DPS--GLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPN 128 (344)
T ss_dssp ETTTS--CCT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCC
T ss_pred eCCHH--Hhc--cCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCC
Confidence 33443 454 89999999999999999999999999 5777775 357999999999 999753 68999999
Q ss_pred chhhhHHHHHHHHHhhcCeeEEEEEEEeecCCCccc--------------------ccCCCC---Ccccccccccceeec
Q 025476 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT--------------------VDGPSS---KDWRGGRAASFNIIP 210 (252)
Q Consensus 154 CtT~~Lap~lk~L~~~fgI~~~~~tTvha~t~~q~~--------------------~D~~~~---~~~r~~r~~a~nIiP 210 (252)
|+|+|++|+++||+++|||+++.|+|+|++|++.+- +++... +...++...++|++|
T Consensus 129 C~tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p 208 (344)
T 3tz6_A 129 CTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVP 208 (344)
T ss_dssp HHHHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBC
T ss_pred cHHHHHHHHHHHHHHhCCCceEEEEeccCCCccChhhhHHHHHHHHhhhccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999997432 222110 123567779999999
Q ss_pred CC-----Cch--HHH-------HHHHhccCCCceeEEEEEcccchhh
Q 025476 211 SS-----TGA--AKV-------FFSRLRMFVVLLWSLADRSLLSTVI 243 (252)
Q Consensus 211 ~~-----tga--a~~-------~~kvip~l~gkl~~~a~rVP~~~~~ 243 (252)
+. +|. +++ .+|++..-.-+++.+|+|||+..-+
T Consensus 209 ~i~~~~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vrvPv~rGh 255 (344)
T 3tz6_A 209 LAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGH 255 (344)
T ss_dssp CCSCBCSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCE
T ss_pred cccccccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEEeceeceE
Confidence 74 243 343 3466643334799999999998654
No 41
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=99.96 E-value=1.5e-29 Score=236.46 Aligned_cols=215 Identities=22% Similarity=0.269 Sum_probs=154.4
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC-C-CCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEE
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND-P-FITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind-~-~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~ 77 (252)
|+++||||+| +|.+|+.++|.+.++|.++++.+.. . ..+-.+ ...| +|. . +. .|..+++.+.
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~-------~~~~-~~~-~-----~~-~~p~~~~~~~ 81 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKY-------KDAA-SWK-Q-----TE-TLPETEQDIV 81 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBH-------HHHC-CCC-C-----SS-CCCHHHHTCB
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCH-------HHhc-ccc-c-----cc-ccccccccce
Confidence 6779999999 8999999999999999899877642 1 111110 0001 010 0 00 0100112223
Q ss_pred EEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCC-----CCCCeEEeecCccccC---------
Q 025476 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-----KDAPMFVVGVNENEYK--------- 143 (252)
Q Consensus 78 v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps-----~d~p~vV~gVN~~~~~--------- 143 (252)
+ ++-++++ .|. ++|+||+|+|.+.+++.++.++++|+ +||+.++ +|+|++|++||.+.|.
T Consensus 82 v-~~~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~--~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~ 155 (381)
T 3hsk_A 82 V-QECKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGL--AVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQA 155 (381)
T ss_dssp C-EESSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTC--EEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHH
T ss_pred E-EeCchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCC--EEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhh
Confidence 3 2233331 354 89999999999999999999999999 4566654 3579999999999885
Q ss_pred ------CCCCeEEcCCchhhhHHHHHHHHHhhcC-eeEEEEEEEeecCCCcccccCCCCCcccccccccceeecCCCch-
Q 025476 144 ------PELNIVSNASCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGA- 215 (252)
Q Consensus 144 ------~~~~IIS~asCtT~~Lap~lk~L~~~fg-I~~~~~tTvha~t~~q~~~D~~~~~~~r~~r~~a~nIiP~~tga- 215 (252)
...++||||+|+|+|++++|+||+++|| |+++.++|+|++|++++... . ..+.+++|++|+.++.
T Consensus 156 ~~~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~----~---~~~~~~~N~~Py~~~~e 228 (381)
T 3hsk_A 156 VSKGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPG----V---SGMDILDNIVPYISGEE 228 (381)
T ss_dssp HHTTCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC----------C---CHHHHTTCCBCCCTTHH
T ss_pred cccccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCC----c---chhhhhcChhhcccchH
Confidence 2356999999999999999999999999 99999999999999987311 1 1247889999999875
Q ss_pred HH---HHHHHhccCCC-------------ceeEEEEEcccchhh
Q 025476 216 AK---VFFSRLRMFVV-------------LLWSLADRSLLSTVI 243 (252)
Q Consensus 216 a~---~~~kvip~l~g-------------kl~~~a~rVP~~~~~ 243 (252)
.+ ++.|+++.+++ +++++|+|||+...+
T Consensus 229 ~k~~~Ei~kiL~~l~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~ 272 (381)
T 3hsk_A 229 DKLEWETKKILGGVNAEGTEFVPIPESEMKVSAQCNRVPVIDGH 272 (381)
T ss_dssp HHHHHHHHHHTCEECTTSSSEECCCTTTCEEEEECCBCSCSSCC
T ss_pred HHHHHHHHHHhhhcccccccccccccCCCceEEEEEEeceeccE
Confidence 33 57888988766 899999999998654
No 42
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=99.95 E-value=3.1e-28 Score=225.48 Aligned_cols=215 Identities=13% Similarity=0.015 Sum_probs=161.0
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCC-----CceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCe
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~-----~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~ 74 (252)
|+++||+|+| +|++|+.++|.+.+++ .++++++++.. +... .+++.|++|. +. . .
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~-~agk-----~~~~~~~~l~-~~-----~-~------ 67 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAAT-SAGS-----TLGEHHPHLT-PL-----A-H------ 67 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESS-CTTS-----BGGGTCTTCG-GG-----T-T------
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCC-cCCC-----chhhhccccc-cc-----c-e------
Confidence 5457999999 9999999999999988 89999998642 2211 1466676665 21 0 1
Q ss_pred eEEEEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC--C-C--------------CeEEeec
Q 025476 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--D-A--------------PMFVVGV 137 (252)
Q Consensus 75 ~i~v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~--d-~--------------p~vV~gV 137 (252)
+.+ .+.+++ .|. ++|+||+|+|.+.+++.++.+ ++|++.|.+|++.. | + |..++++
T Consensus 68 -~~~-~~~~~~--~~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv 140 (352)
T 2nqt_A 68 -RVV-EPTEAA--VLG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPEL 140 (352)
T ss_dssp -CBC-EECCHH--HHT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTS
T ss_pred -eee-ccCCHH--Hhc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEeccc
Confidence 112 112222 264 899999999999999999999 99985444455532 2 2 6667777
Q ss_pred --CccccCCCCCeEEcCCchhhhHHHHHHHHHhhcCee-EEEEEEEeecCCC-cccccCCCCCcccccccccceeec-CC
Q 025476 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV-EGLMTTVHSITAT-QKTVDGPSSKDWRGGRAASFNIIP-SS 212 (252)
Q Consensus 138 --N~~~~~~~~~IIS~asCtT~~Lap~lk~L~~~fgI~-~~~~tTvha~t~~-q~~~D~~~~~~~r~~r~~a~nIiP-~~ 212 (252)
|.+.++ ..++||||+|+|+|+++.|+||+++++|+ ++.++|+|++|++ |+..|+. +.++++.+..++|++| +.
T Consensus 141 ~~n~~~i~-~~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~-~~~~~~~~~~ay~~~~~h~ 218 (352)
T 2nqt_A 141 PGARDQLR-GTRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDL-LGAEVIGSARAYNIAGVHR 218 (352)
T ss_dssp TTHHHHHT-TCSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGG-SHHHHTTCCEECSTTTTST
T ss_pred ccCHHHHh-cCCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCccccccc-cHHHHhhhcccccCCCcce
Confidence 999998 46899999999999999999999999999 9999999999999 7777754 4677888888999988 43
Q ss_pred C--chHHHHHHHhccCCCceeEEEEEcccchhhh
Q 025476 213 T--GAAKVFFSRLRMFVVLLWSLADRSLLSTVIR 244 (252)
Q Consensus 213 t--gaa~~~~kvip~l~gkl~~~a~rVP~~~~~~ 244 (252)
+ -..++++|++. .+.+++.+++|||+...+-
T Consensus 219 h~pEi~~e~~ki~~-~~~~v~ft~~rvP~~rG~~ 251 (352)
T 2nqt_A 219 HTPEIAQGLRAVTD-RDVSVSFTPVLIPASRGIL 251 (352)
T ss_dssp THHHHHHHHHTTCS-SCCEEEEEEEECSCSSCEE
T ss_pred ecHHHHHHHHHHhC-CCCCEEEEEEEEccccEEE
Confidence 2 01123355554 3678999999999987653
No 43
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=99.94 E-value=5.9e-28 Score=222.41 Aligned_cols=205 Identities=14% Similarity=0.114 Sum_probs=146.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCe-eEEEEee
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK-PVTVFGV 81 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~-~i~v~~~ 81 (252)
+||+|.| +|.+|+.+++.+.++++++++++.... +.++.-.-+ ...|..| .|+ .+.+. +
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~-~~~saGk~~--~~~~p~~---------------~~~~~~~v~-~ 65 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA-QSNDAGKLI--SDLHPQL---------------KGIVELPLQ-P 65 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET-TCTTTTSBH--HHHCGGG---------------TTTCCCBEE-E
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC-chhhcCCch--HHhCccc---------------cCccceeEe-c
Confidence 7999999 899999999999998999988875431 000000000 1111111 221 22332 1
Q ss_pred c-CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCC--CC--CC---------------eEEeec---C
Q 025476 82 R-NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS--KD--AP---------------MFVVGV---N 138 (252)
Q Consensus 82 ~-dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps--~d--~p---------------~vV~gV---N 138 (252)
- ++++ |. .++|+||+|+|.+.+++.++.|+++|+|.|-+|++. +| +| .+|||+ |
T Consensus 66 ~~~~~~--~~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn 142 (337)
T 3dr3_A 66 MSDISE--FS-PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWC 142 (337)
T ss_dssp ESSGGG--TC-TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTC
T ss_pred cCCHHH--Hh-cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEccccC
Confidence 1 3333 31 289999999999999999999999999543334432 12 21 346666 9
Q ss_pred ccccCCCCCeEEcCCchhhhHHHHHHHHHh--hcCeeEE-EEEEEeecCCCc-ccccCCCCCcccccccccceeecCCCc
Q 025476 139 ENEYKPELNIVSNASCTTNCLAPLAKVIHD--KFGIVEG-LMTTVHSITATQ-KTVDGPSSKDWRGGRAASFNIIPSSTG 214 (252)
Q Consensus 139 ~~~~~~~~~IIS~asCtT~~Lap~lk~L~~--~fgI~~~-~~tTvha~t~~q-~~~D~~~~~~~r~~r~~a~nIiP~~tg 214 (252)
.+.++. .++||||+|+|+|++++|+||++ .|+++++ .|+|+|++|+++ +..|+. +.+++ |++|..++
T Consensus 143 ~~~i~~-~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~-~~~~~-------n~~py~~~ 213 (337)
T 3dr3_A 143 GNKLKE-ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISN-SFCEV-------SLQPYGVF 213 (337)
T ss_dssp CHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTT-SGGGC-------SEEECSTT
T ss_pred HHHhCC-CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCccccccc-ccccc-------ceEccCcc
Confidence 999974 78999999999999999999999 6999999 999999999996 456644 34443 99999887
Q ss_pred hHHHHHHHhccCCC----ceeEEEEEcccchhh
Q 025476 215 AAKVFFSRLRMFVV----LLWSLADRSLLSTVI 243 (252)
Q Consensus 215 aa~~~~kvip~l~g----kl~~~a~rVP~~~~~ 243 (252)
. .+.+||+.+ +++.+++|||+...+
T Consensus 214 ~----h~h~Pei~~~l~~~v~ft~~rvPv~rG~ 242 (337)
T 3dr3_A 214 T----HRHQPEIATHLGADVIFTPHLGNFPRGI 242 (337)
T ss_dssp T----CTHHHHHHHHHTSCCEEEEEEESSSSCE
T ss_pred c----ceechhHHhhhcCCEEEEEEEecccccE
Confidence 5 346677766 899999999998665
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.86 E-value=5.7e-23 Score=190.01 Aligned_cols=202 Identities=11% Similarity=0.081 Sum_probs=145.5
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
+||||+| +|.+|+.++|.|.++|.++|+.+.... +.. -+|++.|+.|. +.+.+ ++.
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~-~aG-----~~~~~~~p~~~----------------~~l~~-~~~ 70 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT-YAG-----KKLEEIFPSTL----------------ENSIL-SEF 70 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST-TTT-----SBHHHHCGGGC----------------CCCBC-BCC
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcc-ccc-----CChHHhChhhc----------------cCceE-EeC
Confidence 8999999 899999999999999999999887642 111 11233333221 12222 112
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC---CC--------------------CeEEeecCc
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK---DA--------------------PMFVVGVNE 139 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~---d~--------------------p~vV~gVN~ 139 (252)
+++++ |. ++|+||+|+|...+++.++.+ +|+ +|||++++ ++ |..++++|.
T Consensus 71 ~~~~~-~~--~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n~ 143 (351)
T 1vkn_A 71 DPEKV-SK--NCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHR 143 (351)
T ss_dssp CHHHH-HH--HCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHHH
T ss_pred CHHHh-hc--CCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccCH
Confidence 23322 23 799999999999999998877 788 78999863 22 566677799
Q ss_pred cccCCCCCeEEcCCchhhhHHHHHHHHHhhcCee--EEEEEEEeecCCCccc-ccCCCCCcccccccccceeecCCCch-
Q 025476 140 NEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSSKDWRGGRAASFNIIPSSTGA- 215 (252)
Q Consensus 140 ~~~~~~~~IIS~asCtT~~Lap~lk~L~~~fgI~--~~~~tTvha~t~~q~~-~D~~~~~~~r~~r~~a~nIiP~~tga- 215 (252)
+.++. .++|+||+|+|+++.+.|+||+++++|+ ++.++|+|++|++++- .+.. +. .....|+.|...+.
T Consensus 144 e~i~~-a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~-~~-----~e~~~n~~~y~~~~h 216 (351)
T 1vkn_A 144 EEIKN-AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDY-LF-----SEVNESLRPYNVAKH 216 (351)
T ss_dssp HHHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGG-BH-----HHHTTCCEECSCSCC
T ss_pred HHhcc-CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCccccccc-ch-----hHHhcccccCCcccc
Confidence 99974 5899999999999999999999999999 9999999999999774 3321 11 13345666665431
Q ss_pred --H----HHHHHHhccCCCceeEEEEEcccchhh
Q 025476 216 --A----KVFFSRLRMFVVLLWSLADRSLLSTVI 243 (252)
Q Consensus 216 --a----~~~~kvip~l~gkl~~~a~rVP~~~~~ 243 (252)
. ++++|++.+ ..+++.+|+|||+..-+
T Consensus 217 ~h~pEi~~el~~i~~~-~~~v~ftp~rvPv~rG~ 249 (351)
T 1vkn_A 217 RHVPEMEQELGKISGK-KVNVVFTPHLVPMTRGI 249 (351)
T ss_dssp THHHHHHHHHHHHHTS-CCEEEEEEEEESSSSCE
T ss_pred ccHHHHHHHHHHhhCC-CCCEEEEEEEeccccEE
Confidence 2 234555442 34799999999998755
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.52 E-value=2.2e-07 Score=84.18 Aligned_cols=154 Identities=18% Similarity=0.196 Sum_probs=96.9
Q ss_pred CC-cceEEEEcCChhHHHHHHHHHc-CCCceEEEEeCCCCChhh-hheeeeeecccccCCCcceEEcCCeeeEECCeeEE
Q 025476 1 MG-KVKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFITTDY-MTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (252)
Q Consensus 1 m~-~~kv~InG~GrIGr~v~r~~~~-~~~~~ivaind~~~~~~~-~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~ 77 (252)
|| ++||||+|+|.+|+.+++.+.+ .++++++++.|.. ++. ...+. ..||. .. ..++ + . .
T Consensus 1 M~~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~--~~~~~~~~a---~~~g~----~~-~~~~----~--e--~ 62 (312)
T 1nvm_B 1 MNQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGID--AASDGLARA---QRMGV----TT-TYAG----V--E--G 62 (312)
T ss_dssp CCSCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSC--TTCHHHHHH---HHTTC----CE-ESSH----H--H--H
T ss_pred CCCCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCC--hhhhHHHHH---HHcCC----Cc-ccCC----H--H--H
Confidence 54 6899999999999999999866 7889999999973 332 10110 01110 00 0000 0 0 0
Q ss_pred EEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhC--CCCEEEEcC-CCCCCCeEEeecCccccCC--CCCeEEcC
Q 025476 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKG--GAKKVIISA-PSKDAPMFVVGVNENEYKP--ELNIVSNA 152 (252)
Q Consensus 78 v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~--GakkViis~-ps~d~p~vV~gVN~~~~~~--~~~IIS~a 152 (252)
+. ++.+| .++|+|++|||.....+.+...+++ |. .|++. |..-.|..++.+|.++... ...+++++
T Consensus 63 ll-----~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk--~Vi~ekp~~~g~~~~p~v~~~~~~~~~~~~lva~~ 133 (312)
T 1nvm_B 63 LI-----KLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI--RLIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTCG 133 (312)
T ss_dssp HH-----HSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC--EEEECSTTCSSCBCCHHHHTTTTTTCSEEECCCHH
T ss_pred HH-----hccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC--EEEEcCcccccccccCccCHHHHHhccCCcEEEeC
Confidence 00 11113 2799999999988888999999988 86 45543 3222466677788877632 23466666
Q ss_pred CchhhhHHHHHHHHHhhcCeeEE-EEEEEeecC
Q 025476 153 SCTTNCLAPLAKVIHDKFGIVEG-LMTTVHSIT 184 (252)
Q Consensus 153 sCtT~~Lap~lk~L~~~fgI~~~-~~tTvha~t 184 (252)
.|. ..|++..+.+.+..... .+.++.+.+
T Consensus 134 g~~---~ipl~~a~~~~~~~~~~~iv~~i~sgs 163 (312)
T 1nvm_B 134 GQA---TIPMVAAVSRVAKVHYAEIVASISSKS 163 (312)
T ss_dssp HHH---HHHHHHHHHTTSCEEEEEEEEEEEGGG
T ss_pred Ccc---cchHHHHhhhhccchhHhHhhhhhccc
Confidence 664 45777777777776543 567777666
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.24 E-value=2.1e-06 Score=77.66 Aligned_cols=90 Identities=20% Similarity=0.282 Sum_probs=66.2
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
|+++||+|+|+|++|+.+++.+.+.++++++++.|+. .+. . ++ + | +.++
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~--~~~--~-~~----~-------------------g--v~~~- 49 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRR--ATL--D-TK----T-------------------P--VFDV- 49 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESS--SCC--S-SS----S-------------------C--EEEG-
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCC--HHH--h-hc----C-------------------C--Ccee-
Confidence 7789999999999999999999888889999999873 111 0 00 0 1 1121
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.|.+++- .++|+|++||+.....+.+...+++|. .|+++.|
T Consensus 50 -~d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp 90 (320)
T 1f06_A 50 -ADVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYD 90 (320)
T ss_dssp -GGGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCC
T ss_pred -CCHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCC
Confidence 2333332 278999999999888888999999885 5666665
No 47
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.14 E-value=3.4e-06 Score=75.72 Aligned_cols=91 Identities=20% Similarity=0.267 Sum_probs=61.9
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
|+++||||+|+|+||+.+++++.+.++++++++.|+ +++.... +| + +...
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~--~~~~~~~-------~g--------------~-----~~~~-- 56 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR--NPAEVPF-------EL--------------Q-----PFRV-- 56 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------------CC--------------T-----TSCE--
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHH-------cC--------------C-----CcCC--
Confidence 446899999999999999999988888999999987 3332210 11 0 0000
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
..+..+. .++|+|+.||+.....+.+...+++|. .|++..|
T Consensus 57 ~~~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ekP 97 (304)
T 3bio_A 57 VSDIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTADSFD 97 (304)
T ss_dssp ESSGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEECCC
T ss_pred HHHHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEECCC
Confidence 0222222 278999999999988999999999986 4555433
No 48
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.96 E-value=1.3e-05 Score=72.95 Aligned_cols=93 Identities=22% Similarity=0.341 Sum_probs=66.1
Q ss_pred CcceEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~-v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
+++||||+|+|.+|+. +++++.+.+++++++|.|+ +++..+.. | . .+ +++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~------~---~--~~---------------~~~- 54 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS--RTEEVKRD------F---P--DA---------------EVV- 54 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS--CHHHHHHH------C---T--TS---------------EEE-
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHhh------C---C--CC---------------ceE-
Confidence 4589999999999996 7888877788999999998 44432110 1 0 01 111
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (358)
T 3gdo_A 55 -HELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKP 97 (358)
T ss_dssp -SSTHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecC
Confidence 222221 11237899999999999999999999999 57888666
No 49
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.89 E-value=1.6e-05 Score=71.32 Aligned_cols=94 Identities=29% Similarity=0.350 Sum_probs=66.2
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
|++||||+|+|.+|+.+++++.+.++++++++.|+ +++....+.+ .|| + + +
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~------~-------------~--~--- 52 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVADA--FPAAAEAIAG---AYG------C-------------E--V--- 52 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---HTT------C-------------E--E---
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC--CHHHHHHHHH---HhC------C-------------C--c---
Confidence 34899999999999999999988888999999998 4544322211 010 0 0 1
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|
T Consensus 53 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 95 (331)
T 4hkt_A 53 RTIDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKP 95 (331)
T ss_dssp CCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecC
Confidence 112111 01126899999999999999999999998 56888666
No 50
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.88 E-value=1.8e-05 Score=71.77 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=66.7
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
|++||||+|+|.+|+.+++++.+.++++++++.|+ +.+....+.+ .||- + .+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~~---~~g~-~--------------------~~-- 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR--TEDKREKFGK---RYNC-A--------------------GD-- 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS--SHHHHHHHHH---HHTC-C--------------------CC--
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcCC-C--------------------Cc--
Confidence 36899999999999999999988878999999998 4544322211 1110 0 00
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|
T Consensus 56 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 98 (354)
T 3db2_A 56 ATMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKP 98 (354)
T ss_dssp SSHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccC
Confidence 111111 01136899999999999999999999999 56788666
No 51
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.88 E-value=1.4e-05 Score=72.24 Aligned_cols=96 Identities=27% Similarity=0.419 Sum_probs=66.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
|| +||||+|+|.+|+.+++++.+.++++++++.|+ +.+....+.+ .||. . .++
T Consensus 1 M~-~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~~-----~---------------~~~- 53 (344)
T 3ezy_A 1 MS-LRIGVIGLGRIGTIHAENLKMIDDAILYAISDV--REDRLREMKE---KLGV-----E---------------KAY- 53 (344)
T ss_dssp -C-EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS--CHHHHHHHHH---HHTC-----S---------------EEE-
T ss_pred Ce-eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HhCC-----C---------------cee-
Confidence 55 899999999999999999988888999999997 4444322211 1110 0 011
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 54 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 96 (344)
T 3ezy_A 54 -KDPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKP 96 (344)
T ss_dssp -SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred -CCHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECC
Confidence 111111 01127899999999998889999999999 56888766
No 52
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.88 E-value=1.5e-05 Score=72.64 Aligned_cols=98 Identities=24% Similarity=0.257 Sum_probs=67.3
Q ss_pred CCcceEEEEcCChhHHHHHHHHH-cCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~-~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
||++||||+|+|.+|+.+++++. ..++++++++.|+ +++....+. ..||. . ..++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a---~~~g~----~---------------~~~~ 76 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI--VAGRAQAAL---DKYAI----E---------------AKDY 76 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS--STTHHHHHH---HHHTC----C---------------CEEE
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHH---HHhCC----C---------------Ceee
Confidence 77899999999999999999998 6678999999998 343321111 11110 0 0111
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 77 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 119 (357)
T 3ec7_A 77 --NDYHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKP 119 (357)
T ss_dssp --SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecC
Confidence 122111 01126899999999999999999999999 67888666
No 53
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.87 E-value=2.1e-05 Score=71.62 Aligned_cols=93 Identities=22% Similarity=0.323 Sum_probs=65.6
Q ss_pred CcceEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~-v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
+++||||+|+|.+|+. +++++.+.+++++++|.|+ +++..+. .| . .+ +++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~------~~---~--~~---------------~~~- 54 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVER--SKELSKE------RY---P--QA---------------SIV- 54 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECS--SCCGGGT------TC---T--TS---------------EEE-
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHH------hC---C--CC---------------ceE-
Confidence 3589999999999996 8888888888999999998 3333210 01 0 00 111
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (362)
T 3fhl_A 55 -RSFKEL-TEDPEIDLIVVNTPDNTHYEYAGMALEAG-KNVVVEKP 97 (362)
T ss_dssp -SCSHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEecC
Confidence 222221 11236899999999999999999999999 56888666
No 54
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.87 E-value=2.6e-05 Score=70.69 Aligned_cols=94 Identities=23% Similarity=0.402 Sum_probs=66.8
Q ss_pred CC-cceEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 1 MG-KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 1 m~-~~kv~InG~GrIGr~-v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
|| ++||||+|+|.+|+. +++++.+.+++++++|.|+ +++.... .+ . .+ ++
T Consensus 4 M~~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~--~~~~~~~------~~---~--~~---------------~~ 55 (352)
T 3kux_A 4 MADKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS--DASKVHA------DW---P--AI---------------PV 55 (352)
T ss_dssp TTCCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHHT------TC---S--SC---------------CE
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC--CHHHHHh------hC---C--CC---------------ce
Confidence 54 589999999999996 8888888888999999998 4544320 01 1 00 01
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+ .|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 56 ~--~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKP 99 (352)
T 3kux_A 56 V--SDPQML-FNDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKP 99 (352)
T ss_dssp E--SCHHHH-HHCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSS
T ss_pred E--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECC
Confidence 1 122211 11136899999999999999999999999 57888666
No 55
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.82 E-value=2.8e-05 Score=70.91 Aligned_cols=95 Identities=23% Similarity=0.342 Sum_probs=67.0
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
|+++||||+|+|.+|+.+++++.+.+++++++|.|+ +++... ..+ .+|. . ++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~-~a~---~~g~------~---------------~~- 54 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI--LAEKRE-AAA---QKGL------K---------------IY- 54 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS--SHHHHH-HHH---TTTC------C---------------BC-
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHH-HHH---hcCC------c---------------ee-
Confidence 336899999999999999999988888999999997 454432 111 1110 0 00
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP 97 (359)
T 3e18_A 55 -ESYEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKP 97 (359)
T ss_dssp -SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCC
Confidence 111111 01137899999999999999999999999 56888666
No 56
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.81 E-value=1.7e-05 Score=71.69 Aligned_cols=89 Identities=21% Similarity=0.289 Sum_probs=64.8
Q ss_pred CCcceEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr-~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|+++||||+|+|.||+ .+++++.+.+++++++|.|+. .+. +| + +++
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~--~~~----------~g------~---------------~~~ 69 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRH--GTV----------EG------V---------------NSY 69 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSS--CCC----------TT------S---------------EEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCC--hhh----------cC------C---------------Ccc
Confidence 4468999999999999 799999888889999999983 211 00 0 011
Q ss_pred eecCCCCCCCcc-cCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAE-TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~-~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+ .++|.|+-||+.....+.+...+++| |.|++--|
T Consensus 70 --~~~~~l-l~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 113 (330)
T 4ew6_A 70 --TTIEAM-LDAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKP 113 (330)
T ss_dssp --SSHHHH-HHHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred --CCHHHH-HhCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCC
Confidence 111111 011 26899999999988889999999999 67887666
No 57
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.81 E-value=2.6e-05 Score=70.01 Aligned_cols=96 Identities=20% Similarity=0.239 Sum_probs=65.1
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
+++||||+|+|.||+.+++++.+.+++++++|.|+ +++....+.+ .||. + ..+
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~--~~~~~~~~a~---~~~~-------------------~-~~~-- 56 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR--TLESAQAFAN---KYHL-------------------P-KAY-- 56 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS--CSSTTCC------CCCC-------------------S-CEE--
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHH---HcCC-------------------C-ccc--
Confidence 46899999999999999999887788999999987 3332211110 0110 0 011
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 57 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 99 (329)
T 3evn_A 57 DKLEDML-ADESIDVIYVATINQDHYKVAKAALLAG-KHVLVEKP 99 (329)
T ss_dssp SCHHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEccC
Confidence 1222211 1237899999999998999999999999 46788666
No 58
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.81 E-value=1.9e-05 Score=71.15 Aligned_cols=97 Identities=16% Similarity=0.159 Sum_probs=66.8
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
|+++||||+|+|.+|+.+++++.+.++++++++.|+ +.+....+.+ .||.- + ++
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~~~-----~---------------~~- 56 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR--RLENAQKMAK---ELAIP-----V---------------AY- 56 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS--SSHHHHHHHH---HTTCC-----C---------------CB-
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHH---HcCCC-----c---------------ee-
Confidence 446899999999999999999988888999999997 4443322111 11100 0 00
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|
T Consensus 57 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 99 (330)
T 3e9m_A 57 -GSYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQG-KPVLLEKP 99 (330)
T ss_dssp -SSHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTT-CCEEECSS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCC-CeEEEeCC
Confidence 111111 01126899999999998899999999999 45888666
No 59
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.80 E-value=3.3e-05 Score=70.05 Aligned_cols=96 Identities=24% Similarity=0.368 Sum_probs=65.7
Q ss_pred CCcceEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr-~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|| +||||+|+|.+|+ .+++++.+.+++++++|.|+. ..+..+ ..||. + + +.++
T Consensus 1 M~-~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a------~~~~~-~--------~---------~~~~ 54 (349)
T 3i23_A 1 MT-VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAA------APFKE-K--------G---------VNFT 54 (349)
T ss_dssp CC-EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHH------HHHHT-T--------T---------CEEE
T ss_pred Ce-eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHH------HhhCC-C--------C---------CeEE
Confidence 55 8999999999998 688888777889999999973 111111 11110 0 0 0111
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (349)
T 3i23_A 55 --ADLNEL-LTDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKP 97 (349)
T ss_dssp --SCTHHH-HSCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred --CCHHHH-hcCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECC
Confidence 223222 11236899999999999999999999999 67888666
No 60
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.75 E-value=5.5e-05 Score=68.23 Aligned_cols=97 Identities=23% Similarity=0.307 Sum_probs=67.0
Q ss_pred CCcceEEEEcCChhHHHHHHHHH-cCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~-~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|| +||||+|+|.+|+.+++++. ..++++++++.|+ +.+....+. ..||. .. .++
T Consensus 1 M~-~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~--~~~~~~~~~---~~~g~----~~---------------~~~ 55 (344)
T 3mz0_A 1 MS-LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV--NQEAAQKVV---EQYQL----NA---------------TVY 55 (344)
T ss_dssp CC-EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS--SHHHHHHHH---HHTTC----CC---------------EEE
T ss_pred Ce-EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHH---HHhCC----CC---------------eee
Confidence 54 89999999999999999998 6678999999998 444332211 11110 00 111
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 56 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP 98 (344)
T 3mz0_A 56 --PNDDSL-LADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKP 98 (344)
T ss_dssp --SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred --CCHHHH-hcCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCC
Confidence 112111 01126899999999999999999999999 57888766
No 61
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.75 E-value=1.2e-05 Score=72.81 Aligned_cols=97 Identities=18% Similarity=0.171 Sum_probs=66.9
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCC-------ceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDD-------VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~-------~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G 73 (252)
|+++||||+|+|.||+.+++++...++ .+|++|.|+ +++....+.+ .||- .
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~--~~~~a~~~a~---~~g~-----~------------ 61 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR--DAEAVRAAAG---KLGW-----S------------ 61 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS--SHHHHHHHHH---HHTC-----S------------
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC--CHHHHHHHHH---HcCC-----C------------
Confidence 778999999999999999998865443 499999998 5554322211 1210 0
Q ss_pred eeEEEEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 74 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 74 ~~i~v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+++ .|.+++ ..+.++|.|+=||+.....+.+...+++| |.|++--|
T Consensus 62 ---~~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKP 107 (390)
T 4h3v_A 62 ---TTE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKP 107 (390)
T ss_dssp ---EEE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred ---ccc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecC
Confidence 011 122211 11237899999999999999999999999 57888666
No 62
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.74 E-value=4.5e-05 Score=69.45 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=32.0
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcC------CCceEEEEeCCC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQR------DDVELVAVNDPF 37 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~------~~~~ivaind~~ 37 (252)
|+++||+|+|+|.||+.+++.+.+. +++++++|.|..
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~ 44 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSR 44 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSS
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecC
Confidence 7789999999999999999998764 569999999873
No 63
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.73 E-value=4.6e-05 Score=71.50 Aligned_cols=103 Identities=25% Similarity=0.340 Sum_probs=67.9
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeee-eecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~-ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|+++||||+|+|.+|+.+++++...+++++++|.|+ +++....+.+ +. .||. + ...++
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~--~~~~~~~~a~~~~-~~g~-~-----------------~~~~~ 76 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP--DPYMVGRAQEILK-KNGK-K-----------------PAKVF 76 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--CHHHHHHHHHHHH-HTTC-C-----------------CCEEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHHHHH-hcCC-C-----------------CCcee
Confidence 456899999999999999999988888999999998 4544322211 00 0110 0 01111
Q ss_pred e--ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 G--VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~--~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
. +.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 77 ~~~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP 123 (444)
T 2ixa_A 77 GNGNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVS 123 (444)
T ss_dssp CSSTTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCC
T ss_pred ccCCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 1 0122221 112368999999999988899999999994 6777655
No 64
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.72 E-value=3.2e-05 Score=67.67 Aligned_cols=35 Identities=31% Similarity=0.529 Sum_probs=31.0
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|++|||+|+|+|++|+.+.+++.++++ +++++.|.
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~ 35 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGH-EIVGVIEN 35 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECS
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEec
Confidence 555899999999999999999999998 99999886
No 65
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.72 E-value=4.1e-05 Score=69.00 Aligned_cols=96 Identities=25% Similarity=0.411 Sum_probs=66.7
Q ss_pred CC-cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~-~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|+ ++||||+|+|.+|+.+++++.+.++++++++.|. +.+....+.+ .|| +.++
T Consensus 1 M~~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g---------------------~~~~ 54 (344)
T 3euw_A 1 MSLTLRIALFGAGRIGHVHAANIAANPDLELVVIADP--FIEGAQRLAE---ANG---------------------AEAV 54 (344)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---TTT---------------------CEEE
T ss_pred CCCceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcC---------------------Ccee
Confidence 43 4899999999999999999988888999999997 4443322111 011 0111
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++..|
T Consensus 55 --~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 97 (344)
T 3euw_A 55 --ASPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERG-IPALCEKP 97 (344)
T ss_dssp --SSHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTT-CCEEECSC
T ss_pred --CCHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcC-CcEEEECC
Confidence 122221 11237899999999999999999999999 45888666
No 66
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.71 E-value=4.1e-05 Score=68.80 Aligned_cols=96 Identities=22% Similarity=0.216 Sum_probs=65.3
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCC--CceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~--~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
|| +|+||+|+|.||+.+++++.+.+ ++++++|.|+ +++....+. ..||.. + +
T Consensus 1 M~-~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~--~~~~a~~~a---~~~~~~-----~---------------~ 54 (334)
T 3ohs_X 1 MA-LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR--DLSRAKEFA---QKHDIP-----K---------------A 54 (334)
T ss_dssp -C-EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS--SHHHHHHHH---HHHTCS-----C---------------E
T ss_pred Cc-cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC--CHHHHHHHH---HHcCCC-----c---------------c
Confidence 55 89999999999999999887665 4899999997 454432211 112110 0 0
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+ .+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 ~--~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP 98 (334)
T 3ohs_X 55 Y--GSYEEL-AKDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKP 98 (334)
T ss_dssp E--SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred c--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECC
Confidence 0 111111 01126899999999999999999999999 67888766
No 67
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.68 E-value=4.5e-05 Score=69.33 Aligned_cols=96 Identities=13% Similarity=0.151 Sum_probs=66.2
Q ss_pred CCcceEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr-~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|+++||||+|+|.+|+ .+++++.+.+++++++|.|+ +.+....+.+ .|| +..+
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g---------------------~~~~ 78 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR--RWDRAKRFTE---RFG---------------------GEPV 78 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES--SHHHHHHHHH---HHC---------------------SEEE
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC--CHHHHHHHHH---HcC---------------------CCCc
Confidence 5568999999999998 78999988888999999997 4443322111 011 0011
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 79 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 121 (350)
T 3rc1_A 79 --EGYPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKP 121 (350)
T ss_dssp --ESHHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred --CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCC
Confidence 122211 112368999999999999999999999994 5777666
No 68
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.66 E-value=7e-05 Score=67.66 Aligned_cols=95 Identities=17% Similarity=0.233 Sum_probs=63.2
Q ss_pred CCcceEEEEcCChhHHH-HHH-HHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 1 MGKVKIGINGFGRIGRL-VAR-VILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~-v~r-~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
|| +||||+|+|.+|+. +++ .+...+++++++|.|+. ++.. ..++ ++. + +++
T Consensus 1 m~-~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~--~~~~-~~~~------~~~--------~---------~~~ 53 (345)
T 3f4l_A 1 MV-INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRH--AKPE-EQAP------IYS--------H---------IHF 53 (345)
T ss_dssp -C-EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSS--CCGG-GGSG------GGT--------T---------CEE
T ss_pred Cc-eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCC--HhHH-HHHH------hcC--------C---------Cce
Confidence 54 89999999999984 777 44566789999999983 3322 1110 001 1 011
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+ .+++++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 54 ~--~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (345)
T 3f4l_A 54 T--SDLDEV-LNDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKP 97 (345)
T ss_dssp E--SCTHHH-HTCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred E--CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCC
Confidence 1 223222 11236899999999998899999999999 56777665
No 69
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.65 E-value=8.4e-05 Score=67.83 Aligned_cols=88 Identities=22% Similarity=0.268 Sum_probs=60.8
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCC--------CceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEEC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRD--------DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~--------~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~ 72 (252)
|+++||||+|+|.||+.+++.+.+.+ ++++++|.|.. ++.. . .+ +
T Consensus 1 Mk~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~--~~~~----------------------~-~~--~ 53 (332)
T 2ejw_A 1 MEALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD--PRKP----------------------R-AI--P 53 (332)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC--TTSC----------------------C-SS--C
T ss_pred CCeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC--HHHh----------------------h-cc--C
Confidence 66799999999999999999987766 68999999862 2110 0 00 0
Q ss_pred CeeEEEEeecCCCCCCCcccCccEEEecCCCCC-CHHhHHHHHhCCCCEEEEcC
Q 025476 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFT-DKDKAAAHLKGGAKKVIISA 125 (252)
Q Consensus 73 G~~i~v~~~~dp~~~~w~~~~vdiV~e~tg~f~-~~~~a~~h~~~GakkViis~ 125 (252)
... + ..|++++- ++|+|++|||... ..+.+...+++|. -|+++
T Consensus 54 ~~~--~--~~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK--hVVta 97 (332)
T 2ejw_A 54 QEL--L--RAEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI--PLITA 97 (332)
T ss_dssp GGG--E--ESSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC--CEEEC
T ss_pred ccc--c--cCCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC--eEEEC
Confidence 000 1 13555553 7899999999763 4567778999986 45553
No 70
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.64 E-value=6.6e-05 Score=68.56 Aligned_cols=92 Identities=22% Similarity=0.343 Sum_probs=64.8
Q ss_pred cceEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG~GrIGr~-v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
++||||+|+|.+|+. +++++.+.++++++++.|+ +.+.... + + . .++ ++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~--~----~---~--~~~---------------~~-- 56 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR--DEEKVKR--D----L---P--DVT---------------VI-- 56 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHHH--H----C---T--TSE---------------EE--
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh--h----C---C--CCc---------------EE--
Confidence 489999999999996 8888888888999999998 4544320 0 1 1 011 11
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 57 ~~~~~l-l~~~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 99 (364)
T 3e82_A 57 ASPEAA-VQHPDVDLVVIASPNATHAPLARLALNAG-KHVVVDKP 99 (364)
T ss_dssp SCHHHH-HTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEeCC
Confidence 112111 01237899999999999999999999999 56777665
No 71
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.64 E-value=5.4e-05 Score=69.03 Aligned_cols=97 Identities=18% Similarity=0.278 Sum_probs=66.4
Q ss_pred CCcceEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~-v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|+++||||+|+|.+|+. +++++.+.++++++++.|+ +++....+.+ .|| .. .++
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~~-----~~---------------~~~ 57 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS--DLERARRVHR---FIS-----DI---------------PVL 57 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS--SHHHHGGGGG---TSC-----SC---------------CEE
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHH---hcC-----CC---------------ccc
Confidence 33589999999999995 8899988888999999998 5554322211 011 00 011
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 58 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 100 (359)
T 3m2t_A 58 --DNVPAM-LNQVPLDAVVMAGPPQLHFEMGLLAMSKG-VNVFVEKP 100 (359)
T ss_dssp --SSHHHH-HHHSCCSEEEECSCHHHHHHHHHHHHHTT-CEEEECSC
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CeEEEECC
Confidence 122211 01136899999999988889999999999 45777666
No 72
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.64 E-value=5.5e-05 Score=68.43 Aligned_cols=97 Identities=21% Similarity=0.196 Sum_probs=63.6
Q ss_pred CCcceEEEEcCChhHHHHHHHHHc-------CCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQ-------RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~-------~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G 73 (252)
|+++||||+|+|+||+.+++++.. .++++|++|.|+ +++....+. ..||. .+
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a---~~~g~-----~~----------- 81 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA--NAGLAEARA---GEFGF-----EK----------- 81 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHH---HHHTC-----SE-----------
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC--CHHHHHHHH---HHhCC-----Ce-----------
Confidence 667999999999999999887642 356899999998 444332211 11210 00
Q ss_pred eeEEEEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 74 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 74 ~~i~v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
++ .|.+++ ..+.++|.|+=||+.....+.+...+++|. -|++--|
T Consensus 82 ----~y--~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EKP 126 (393)
T 4fb5_A 82 ----AT--ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEKP 126 (393)
T ss_dssp ----EE--SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred ----ec--CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEccC
Confidence 11 111111 112368999999999999999999999985 5777666
No 73
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.62 E-value=7.9e-05 Score=66.10 Aligned_cols=94 Identities=17% Similarity=0.261 Sum_probs=65.2
Q ss_pred CCcceEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~-v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|+++||||+|+|.+|+. +++++.+.++++++++.|+ +++....+.+ .||. + . +
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~~~-~----------~--~-------- 57 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP--NKVKREKICS---DYRI-M----------P--F-------- 57 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS--CHHHHHHHHH---HHTC-C----------B--C--------
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcCC-C----------C--c--------
Confidence 55789999999999996 8888887788999999998 4544322211 1110 0 0 0
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++- + ++|+|+-||+.....+.+...+++|. .|++.-|
T Consensus 58 --~~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 98 (308)
T 3uuw_A 58 --DSIESLA--K-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKP 98 (308)
T ss_dssp --SCHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred --CCHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCC
Confidence 1122110 1 68999999999999999999999985 5777656
No 74
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.60 E-value=7.2e-05 Score=67.37 Aligned_cols=95 Identities=19% Similarity=0.199 Sum_probs=65.0
Q ss_pred cceEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG~GrIGr~-v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
++||||+|+|.||+. ++.++.+.+++++++|.|+ +++....+. ..||- .+ ++
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a---~~~g~-----~~---------------~y-- 75 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR--DLTRAREMA---DRFSV-----PH---------------AF-- 75 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS--SHHHHHHHH---HHHTC-----SE---------------EE--
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHH---HHcCC-----Ce---------------ee--
Confidence 389999999999986 4677778888999999998 555432211 11210 00 11
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.|.+++ ..+.++|.|+=||+.....+.+...+++| |-|++--|
T Consensus 76 ~d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKP 118 (350)
T 4had_A 76 GSYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAG-KHVVCEKP 118 (350)
T ss_dssp SSHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcC-CEEEEeCC
Confidence 111111 11237899999999999999999999999 46777666
No 75
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.60 E-value=0.00012 Score=65.63 Aligned_cols=95 Identities=18% Similarity=0.282 Sum_probs=64.0
Q ss_pred cceEEEEcCChhHHHHHHHHH-cCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~-~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
++||||+|+|.+|+.+++++. +.++++++++.|+ +.+....+.+ .||. . .++
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~--~~~~~~~~a~---~~g~------------~--------~~~-- 60 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL--DSNQLEWAKN---ELGV------------E--------TTY-- 60 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS--CHHHHHHHHH---TTCC------------S--------EEE--
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC--CHHHHHHHHH---HhCC------------C--------ccc--
Confidence 589999999999999999987 6678999999997 4443311110 0110 0 011
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+.||+.....+.+...+++| |.|++..|
T Consensus 61 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~eKp 103 (346)
T 3cea_A 61 TNYKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFCEKP 103 (346)
T ss_dssp SCHHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCC-CEEEEcCC
Confidence 112111 01126899999999988889999999998 45666545
No 76
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.59 E-value=4e-05 Score=68.40 Aligned_cols=92 Identities=18% Similarity=0.249 Sum_probs=62.9
Q ss_pred cceEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG~GrIGr~-v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
++||||+|+|.+|+. +++++.+.++++++++.|+. .+....+. ..|| - + ++
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~--~~~~~~~~---~~~g-----------~--------~--~~-- 56 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPT--RAKALPIC---ESWR-----------I--------P--YA-- 56 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSS--CTTHHHHH---HHHT-----------C--------C--BC--
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCC--HHHHHHHH---HHcC-----------C--------C--cc--
Confidence 589999999999996 88988877789999999973 33221111 0011 0 0 10
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+++.+ +.++|+|+.||+.....+.+...+++|. .|++-.|
T Consensus 57 ~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP 97 (319)
T 1tlt_A 57 DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKP 97 (319)
T ss_dssp SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESS
T ss_pred CcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCC
Confidence 122222 1378999999998888888888999885 5677555
No 77
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.58 E-value=8.8e-05 Score=67.38 Aligned_cols=98 Identities=13% Similarity=0.216 Sum_probs=65.7
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
++||||+|+|.+|+.+++++.+.++++++++.|+ +.+....+. ..||-.+ . ..++ .
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~--~~~~~~~~a---~~~~~~~--------~---------~~~~--~ 61 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASR--SLEKAKAFA---TANNYPE--------S---------TKIH--G 61 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHH---HHTTCCT--------T---------CEEE--S
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHH---HHhCCCC--------C---------Ceee--C
Confidence 5899999999999999999988888999999997 444332111 1121000 0 0111 1
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 62 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP 103 (362)
T 1ydw_A 62 SYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKP 103 (362)
T ss_dssp SHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSS
T ss_pred CHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 12111 011268999999999988899999999984 5777555
No 78
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.56 E-value=8.1e-05 Score=67.40 Aligned_cols=94 Identities=20% Similarity=0.263 Sum_probs=66.1
Q ss_pred cceEEEEcCChhHHHHHHHHHcC-CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGINGFGRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~-~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
++||||+|+|.+|+.+++++.+. ++++++++.|+ +.+....+.+ .|| +.++
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~~~---~~~---------------------~~~~-- 64 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI--DPAALKAAVE---RTG---------------------ARGH-- 64 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HHC---------------------CEEE--
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC--CHHHHHHHHH---HcC---------------------Ccee--
Confidence 48999999999999999999887 78999999998 4444322111 011 0111
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|
T Consensus 65 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 107 (354)
T 3q2i_A 65 ASLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKP 107 (354)
T ss_dssp SCHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCC
Confidence 122221 11137899999999998889999999999 56777666
No 79
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.55 E-value=8.4e-05 Score=66.22 Aligned_cols=92 Identities=21% Similarity=0.281 Sum_probs=65.1
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
++||||+|+|.+|+.+++++.+.++++++++.|+ +.+....+. + . +.++ .
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~--~~~~~~~~~------------------~-~-------~~~~--~ 59 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS--NPDNLALVP------------------P-G-------CVIE--S 59 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES--CHHHHTTCC------------------T-T-------CEEE--S
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHH------------------h-h-------Cccc--C
Confidence 4899999999999999999988778999999997 444321111 1 1 1121 2
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+++++ ..+.++|+|+.||+.....+.+...+++| |.|++..|
T Consensus 60 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~eKP 101 (315)
T 3c1a_A 60 DWRSV-VSAPEVEAVIIATPPATHAEITLAAIASG-KAVLVEKP 101 (315)
T ss_dssp STHHH-HTCTTCCEEEEESCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHH-hhCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEcCC
Confidence 23222 11137899999999988889999999998 45777655
No 80
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.55 E-value=2.5e-05 Score=71.09 Aligned_cols=105 Identities=18% Similarity=0.228 Sum_probs=59.3
Q ss_pred CC-cceEEEEcCChhHHHHHHHHHcCC-------CceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEEC
Q 025476 1 MG-KVKIGINGFGRIGRLVARVILQRD-------DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (252)
Q Consensus 1 m~-~~kv~InG~GrIGr~v~r~~~~~~-------~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~ 72 (252)
|| ++||||+|+|.||+.+++.+.+.+ ++++++|.|.. .+.....+ |. ..|. .. .... .+.
T Consensus 3 mM~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~--~~~~~~~~--~~--~~~~-~~--~~~~-~~~-- 70 (331)
T 3c8m_A 3 AMKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSL--HSYYNERI--DI--GKVI-SY--KEKG-SLD-- 70 (331)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSS--CEEECTTC--CH--HHHH-HH--HHTT-CGG--
T ss_pred CCcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECC--hHHhhccc--Ch--HHHh-hh--hccC-Ccc--
Confidence 44 599999999999999999886643 58999999873 22110000 00 0000 00 0000 000
Q ss_pred CeeEEEEe-ecCCCCCCCcccCccEEEecCCCC----CCHHhHHHHHhCCCCEEEEcC
Q 025476 73 EKPVTVFG-VRNPEEIPWAETGAEYVVESTGVF----TDKDKAAAHLKGGAKKVIISA 125 (252)
Q Consensus 73 G~~i~v~~-~~dp~~~~w~~~~vdiV~e~tg~f----~~~~~a~~h~~~GakkViis~ 125 (252)
.++. ..|++++- +.++|+|++||+.. ...+.+...+++|. -|+++
T Consensus 71 ----~~~~~~~d~~~ll--~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGk--hVvta 120 (331)
T 3c8m_A 71 ----SLEYESISASEAL--ARDFDIVVDATPASADGKKELAFYKETFENGK--DVVTA 120 (331)
T ss_dssp ----GCCSEECCHHHHH--HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTC--EEEEC
T ss_pred ----cccCCCCCHHHHh--CCCCCEEEECCCCCCccchHHHHHHHHHHCCC--eEEec
Confidence 0000 01222221 23789999999986 44567888999986 55653
No 81
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.55 E-value=5e-05 Score=70.17 Aligned_cols=95 Identities=20% Similarity=0.226 Sum_probs=65.0
Q ss_pred cceEEEEcCChhHHHHHHHHHcC--------CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCe
Q 025476 3 KVKIGINGFGRIGRLVARVILQR--------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~--------~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~ 74 (252)
++||||+|+|.||+.+++++.+. ++++|++|.|+ +++....+.+ .||. .+
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~--~~~~a~~~a~---~~~~-----~~------------ 83 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ--DQAMAERHAA---KLGA-----EK------------ 83 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS--SHHHHHHHHH---HHTC-----SE------------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC--CHHHHHHHHH---HcCC-----Ce------------
Confidence 58999999999999999988642 35899999998 5554322211 1210 00
Q ss_pred eEEEEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 75 ~i~v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
++ .|.+++ ..+.++|.|+=||+.....+.+...+++| |-|++--|
T Consensus 84 ---~y--~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 128 (412)
T 4gqa_A 84 ---AY--GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCEKP 128 (412)
T ss_dssp ---EE--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred ---EE--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEeecC
Confidence 11 111111 11237899999999999999999999999 56888766
No 82
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.52 E-value=0.00011 Score=68.77 Aligned_cols=101 Identities=13% Similarity=0.112 Sum_probs=66.9
Q ss_pred CCcceEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr-~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|+++||||+|+|.+|+ .+++++.+.+++++++|.|+ +.+....+. ..||.-. ..+.++
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~--~~~~~~~~a---~~~g~~~----------------~~~~~~ 139 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG--NAEKAKIVA---AEYGVDP----------------RKIYDY 139 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS--CHHHHHHHH---HHTTCCG----------------GGEECS
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHH---HHhCCCc----------------cccccc
Confidence 4468999999999997 89998877778999999997 444332111 1111100 001111
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++- .+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 140 --~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKP 182 (433)
T 1h6d_A 140 --SNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKP 182 (433)
T ss_dssp --SSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred --CCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCC
Confidence 2233221 12368999999999988899999999994 5777555
No 83
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.51 E-value=1.9e-05 Score=70.22 Aligned_cols=142 Identities=23% Similarity=0.266 Sum_probs=78.1
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|.++||+|+| +|++|+.+++.+.+.++++++++-|...+ +. .|+.. +++ .+ + . ..+.++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~-~~----------~G~d~-gel--~g---~--~-~gv~v~ 64 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGS-PQ----------LGQDA-GAF--LG---K--Q-TGVALT 64 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTC-TT----------TTSBT-TTT--TT---C--C-CSCBCB
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCc-cc----------ccccH-HHH--hC---C--C-CCceec
Confidence 5568999999 89999999999998899999999886311 11 11111 110 00 0 0 011121
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCCCCeEEeecCccccCCCCCeEE--cCCchhh
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVS--NASCTTN 157 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~vV~gVN~~~~~~~~~IIS--~asCtT~ 157 (252)
.|.+++- .++|+|+|+|......+.+...+++|.+ +|+....-+.-. ...+ +++.....++- |=|=-.|
T Consensus 65 --~dl~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVigTTG~s~~~-~~~L--~~aa~~~~vv~a~N~s~Gv~ 135 (272)
T 4f3y_A 65 --DDIERVC---AEADYLIDFTLPEGTLVHLDAALRHDVK-LVIGTTGFSEPQ-KAQL--RAAGEKIALVFSANMSVGVN 135 (272)
T ss_dssp --CCHHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTCE-EEECCCCCCHHH-HHHH--HHHTTTSEEEECSCCCHHHH
T ss_pred --CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEECCCCCHHH-HHHH--HHHhccCCEEEECCCCHHHH
Confidence 2222211 1579999999877677788888999974 555332211000 0000 01111233444 3344466
Q ss_pred hHHHHHHHHHhhcC
Q 025476 158 CLAPLAKVIHDKFG 171 (252)
Q Consensus 158 ~Lap~lk~L~~~fg 171 (252)
-|.-+++-.-+.|+
T Consensus 136 l~~~~~~~aa~~l~ 149 (272)
T 4f3y_A 136 VTMKLLEFAAKQFA 149 (272)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcC
Confidence 66666666666553
No 84
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.50 E-value=0.00012 Score=64.99 Aligned_cols=88 Identities=16% Similarity=0.225 Sum_probs=61.7
Q ss_pred cceEEEEcCChhHHHHHHHHHc---CCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 3 KVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~---~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
++||||+|+|.||+.+++++.. .++++++++.|.. . + ...|| + ..
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~--~------~--a~~~g--------------~-------~~- 54 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR--E------L--GSLDE--------------V-------RQ- 54 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSS--C------C--CEETT--------------E-------EB-
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECch--H------H--HHHcC--------------C-------CC-
Confidence 5899999999999999998865 4679999999862 1 1 00010 0 00
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 55 --~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (294)
T 1lc0_A 55 --ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYP 97 (294)
T ss_dssp --CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred --CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCC
Confidence 112111 112379999999999989999999999984 5777655
No 85
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.41 E-value=0.00021 Score=67.70 Aligned_cols=94 Identities=16% Similarity=0.237 Sum_probs=61.3
Q ss_pred CC-cceEEEEcCChhHHHHHHHHHc---------CCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeE
Q 025476 1 MG-KVKIGINGFGRIGRLVARVILQ---------RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLL 70 (252)
Q Consensus 1 m~-~~kv~InG~GrIGr~v~r~~~~---------~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~ 70 (252)
|| ++||||+|+|.||+.+++.+.+ .+++++++|.|. +.+....++ + +. .
T Consensus 7 MMk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~--~~~~~~~~~---------~-------~~-~-- 65 (444)
T 3mtj_A 7 GMKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR--NLDKAEALA---------G-------GL-P-- 65 (444)
T ss_dssp SCSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS--CHHHHHHHH---------T-------TC-C--
T ss_pred hhCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC--CHHHhhhhc---------c-------cC-c--
Confidence 55 6899999999999999887753 156999999997 333211110 0 00 0
Q ss_pred ECCeeEEEEeecCCCCCCCcccCccEEEecCCC-CCCHHhHHHHHhCCCCEEEEcCC
Q 025476 71 FGEKPVTVFGVRNPEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 71 i~G~~i~v~~~~dp~~~~w~~~~vdiV~e~tg~-f~~~~~a~~h~~~GakkViis~p 126 (252)
++ .|++++ ..+.++|+|++|||. ....+.+...+++|. .|+..+|
T Consensus 66 -------~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 66 -------LT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp -------EE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred -------cc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 10 122211 112378999999996 677788899999996 4555555
No 86
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.40 E-value=0.0002 Score=63.94 Aligned_cols=93 Identities=20% Similarity=0.260 Sum_probs=64.9
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~d 83 (252)
+||||+|+|.+|+.+++++.+.++++++++.|. +++....+. ..|| . ..++ .+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~--~~~~~~~~~---~~~~------------------~--~~~~--~~ 54 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR--KLETAATFA---SRYQ------------------N--IQLF--DQ 54 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS--SHHHHHHHG---GGSS------------------S--CEEE--SC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHH---HHcC------------------C--CeEe--CC
Confidence 699999999999999999988878999999987 444331111 0011 0 0111 22
Q ss_pred CCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
++++- +.++|+|+.||+.....+.+...+++|. .|++-.|
T Consensus 55 ~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~EKP 94 (325)
T 2ho3_A 55 LEVFF--KSSFDLVYIASPNSLHFAQAKAALSAGK-HVILEKP 94 (325)
T ss_dssp HHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred HHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcCC-cEEEecC
Confidence 33221 2378999999999888899999999984 5777655
No 87
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.39 E-value=3.2e-05 Score=69.39 Aligned_cols=96 Identities=22% Similarity=0.176 Sum_probs=61.8
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
++||+|+| +|++|+.+++++.+.++++|+++-|... .+. .|+-- +++ .+ +....+.++
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~-~~~----------~G~d~-gel--~G-----~~~~gv~v~-- 79 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKG-SSF----------VDKDA-SIL--IG-----SDFLGVRIT-- 79 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTT-CTT----------TTSBG-GGG--TT-----CSCCSCBCB--
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-ccc----------cccch-HHh--hc-----cCcCCceee--
Confidence 58999999 9999999999999999999999988731 111 11111 111 00 000012222
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEE
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkVii 123 (252)
.|++++. .++|+|+|+|......+.+...+++|.. +|+
T Consensus 80 ~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vVi 117 (288)
T 3ijp_A 80 DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSLI-HII 117 (288)
T ss_dssp SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 3343321 1689999999876667788888999984 445
No 88
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.37 E-value=0.00013 Score=66.96 Aligned_cols=95 Identities=22% Similarity=0.307 Sum_probs=66.4
Q ss_pred CcceEEEEcCC-hhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 2 GKVKIGINGFG-RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 2 ~~~kv~InG~G-rIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
|++||||+|+| .+|+.+++++...+++++++|.|+ +++....+. ..|| + +++
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a---~~~g------~---------------~~~- 53 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP--NEDVRERFG---KEYG------I---------------PVF- 53 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS--CHHHHHHHH---HHHT------C---------------CEE-
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHH---HHcC------C---------------CeE-
Confidence 34899999999 999999999988888999999998 444331111 0111 0 011
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 54 -~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 96 (387)
T 3moi_A 54 -ATLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKP 96 (387)
T ss_dssp -SSHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCC
Confidence 122211 11126899999999998889999999999 56777666
No 89
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.36 E-value=0.00033 Score=59.99 Aligned_cols=134 Identities=20% Similarity=0.249 Sum_probs=78.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~d 83 (252)
|||||+|+|++|+.+++.+.+ ++++++++.|.. .. . . . . ..+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~-~g~~lv~v~d~~--~~-~----------------------~-~---------~--~~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER-NGFEIAAILDVR--GE-H----------------------E-K---------M--VRG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEECSS--CC-C----------------------T-T---------E--ESS
T ss_pred CEEEEECCCHHHHHHHHHHhc-CCCEEEEEEecC--cc-h----------------------h-h---------h--cCC
Confidence 489999999999999999884 569998888862 10 0 0 1 1 122
Q ss_pred CCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCC-CCCCeEEeecCccccCC-CCCeEEcCCchhhhHHH
Q 025476 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAPMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (252)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps-~d~p~vV~gVN~~~~~~-~~~IIS~asCtT~~Lap 161 (252)
++++-- .++|+|++|++.....+.+...+++|. .|++..|. .+.+-....+- +..+. ...++-.+.+... ..
T Consensus 43 ~~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~~~~~~~~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~--~~ 116 (236)
T 2dc1_A 43 IDEFLQ--REMDVAVEAASQQAVKDYAEKILKAGI-DLIVLSTGAFADRDFLSRVR-EVCRKTGRRVYIASGAIGG--LD 116 (236)
T ss_dssp HHHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTC-EEEESCGGGGGSHHHHHHHH-HHHHHHCCCEEECCTTCSC--HH
T ss_pred HHHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCC-cEEEECcccCChHHHHHHHH-HHHHhcCCeEEecCccccC--hH
Confidence 322210 278999999998888888888999987 23443332 11110000110 11111 2333333333222 23
Q ss_pred HHHHHHhhcCeeEEEEEEEeec
Q 025476 162 LAKVIHDKFGIVEGLMTTVHSI 183 (252)
Q Consensus 162 ~lk~L~~~fgI~~~~~tTvha~ 183 (252)
.++.... |+++..+++.|+.
T Consensus 117 ~~~~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 117 AIFSASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHHTGG--GEEEEEEEEEEEG
T ss_pred HHHHhhc--cccEEEEEEEcCh
Confidence 3444443 8999999999886
No 90
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.32 E-value=0.00028 Score=63.73 Aligned_cols=95 Identities=23% Similarity=0.234 Sum_probs=66.3
Q ss_pred cceEEEEcCC-hhHHHHHHHHHcC-CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 3 KVKIGINGFG-RIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 3 ~~kv~InG~G-rIGr~v~r~~~~~-~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
++||||+|+| .+|+.+++++.+. +++++++|.|+ +++....+. ..||. . .++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a---~~~~~-----~---------------~~~- 71 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR--TRSHAEEFA---KMVGN-----P---------------AVF- 71 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS--SHHHHHHHH---HHHSS-----C---------------EEE-
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC--CHHHHHHHH---HHhCC-----C---------------ccc-
Confidence 4899999999 8999999999887 78999999998 455432221 11110 0 111
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 72 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 114 (340)
T 1zh8_A 72 -DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKG-VHVICEKP 114 (340)
T ss_dssp -SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCC-CcEEEeCC
Confidence 111111 11126899999999998889999999999 46888666
No 91
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.31 E-value=0.00039 Score=63.20 Aligned_cols=100 Identities=20% Similarity=0.292 Sum_probs=57.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcC--------CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCee
Q 025476 4 VKIGINGFGRIGRLVARVILQR--------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~--------~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~ 75 (252)
+||||+|+|.||+.+++.+.+. +++++++|.|.. .+..-. + |. .++. .. +.... .
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~--~~~~~~-i--d~--~~~~-~~-~~~~~-~------- 65 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSK--SSISGD-F--SL--VEAL-RM-KRETG-M------- 65 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSS--CEEESS-C--CH--HHHH-HH-HHHHS-S-------
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCC--hHhccc-c--CH--HHHH-hh-hccCc-c-------
Confidence 7999999999999999999876 789999999973 211100 0 00 0000 00 00000 0
Q ss_pred EEEEeecCCCCCCCcccCccEEEecCCCCCC----HHhHHHHHhCCCCEEEEcC
Q 025476 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVIISA 125 (252)
Q Consensus 76 i~v~~~~dp~~~~w~~~~vdiV~e~tg~f~~----~~~a~~h~~~GakkViis~ 125 (252)
++...|++++ ..+.++|+|+|||+.... .+.+...+++|. -|++.
T Consensus 66 --~~~~~d~~~l-l~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGk--hVv~~ 114 (327)
T 3do5_A 66 --LRDDAKAIEV-VRSADYDVLIEASVTRVDGGEGVNYIREALKRGK--HVVTS 114 (327)
T ss_dssp --CSBCCCHHHH-HHHSCCSEEEECCCCC----CHHHHHHHHHTTTC--EEEEC
T ss_pred --ccCCCCHHHH-hcCCCCCEEEECCCCcccchhHHHHHHHHHHCCC--eEEec
Confidence 0000011111 112368999999987654 678888999987 45554
No 92
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.30 E-value=0.00042 Score=61.88 Aligned_cols=94 Identities=21% Similarity=0.269 Sum_probs=62.1
Q ss_pred CCcceEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr-~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|| +||||+|+|.+|+ .+++++.+.++++++ +.|+ +.+....+.+ .||. + . .+
T Consensus 1 m~-~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~--~~~~~~~~a~---~~g~-~----------~--------~~- 53 (323)
T 1xea_A 1 MS-LKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR--NPKVLGTLAT---RYRV-S----------A--------TC- 53 (323)
T ss_dssp -C-EEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS--CHHHHHHHHH---HTTC-C----------C--------CC-
T ss_pred CC-cEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC--CHHHHHHHHH---HcCC-C----------c--------cc-
Confidence 54 8999999999998 489988777779999 9887 4443322111 1110 0 0 00
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
....+.+ +.++|+|+.||+.....+.+...+++|. .|++..|
T Consensus 54 -~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP 95 (323)
T 1xea_A 54 -TDYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKP 95 (323)
T ss_dssp -SSTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESC
T ss_pred -cCHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCC
Confidence 0111122 2378999999999888888888899884 4677555
No 93
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.28 E-value=0.00014 Score=64.50 Aligned_cols=101 Identities=20% Similarity=0.270 Sum_probs=63.5
Q ss_pred CCcceEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~-GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|++|||+|+|+ |++|+.+++.+.+.++++++++.|.. .+.. ...| -|.+. + +....+.+.
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~--~~~~---~g~d--~~~~~-------g-----~~~~~v~~~ 63 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE--GSSL---LGSD--AGELA-------G-----AGKTGVTVQ 63 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT--TCTT---CSCC--TTCSS-------S-----SSCCSCCEE
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC--chhh---hhhh--HHHHc-------C-----CCcCCceec
Confidence 44689999997 99999999998888889999888762 2110 0001 01000 0 000012232
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.|++.+- . ++|+|+|+|......+.+...+++|.. +|+..+
T Consensus 64 --~dl~~~l-~--~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTt 104 (273)
T 1dih_A 64 --SSLDAVK-D--DFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTT 104 (273)
T ss_dssp --SCSTTTT-T--SCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred --CCHHHHh-c--CCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECC
Confidence 3444432 1 689999988777677888889999974 556333
No 94
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.28 E-value=0.00024 Score=67.31 Aligned_cols=107 Identities=13% Similarity=0.271 Sum_probs=63.3
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCC-eeeE---ECCeeEE
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDD-KTLL---FGEKPVT 77 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~-~~l~---i~G~~i~ 77 (252)
+++||||+|+|++|+.+++.+...+++++++|.|. +++......+ ..||. . ..+...++ ..+. -.| .+.
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~--~~era~~~a~--~~yG~-~-~~~~~~~~~~~i~~a~~~g-~~~ 94 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR--RLPNTFKAIR--TAYGD-E-ENAREATTESAMTRAIEAG-KIA 94 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS--STHHHHHHHH--HHHSS-S-TTEEECSSHHHHHHHHHTT-CEE
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHHH--HhcCC-c-cccccccchhhhhhhhccC-Cce
Confidence 35899999999999999998888888999999998 4554322221 11231 0 01111000 0000 001 122
Q ss_pred EEeecCCCCCCCcccCccEEEecCCCC-CCHHhHHHHHhCCC
Q 025476 78 VFGVRNPEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGA 118 (252)
Q Consensus 78 v~~~~dp~~~~w~~~~vdiV~e~tg~f-~~~~~a~~h~~~Ga 118 (252)
++ .|.+++ ..+.++|+|++|||.. ...+.+...+++|-
T Consensus 95 v~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK 133 (446)
T 3upl_A 95 VT--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK 133 (446)
T ss_dssp EE--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC
T ss_pred EE--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC
Confidence 22 233222 1223799999999863 45678888999986
No 95
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.24 E-value=0.00031 Score=64.74 Aligned_cols=104 Identities=20% Similarity=0.159 Sum_probs=65.7
Q ss_pred CCcceEEEEcCCh---hHHHHHHHHHcCCCceEEE-EeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeE
Q 025476 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (252)
Q Consensus 1 m~~~kv~InG~Gr---IGr~v~r~~~~~~~~~iva-ind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i 76 (252)
|+++||||+|+|+ ||+.+++++...+++++++ +.|+ +++....+. ..||--. .+...+ +.
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a---~~~g~~~---~~~~~~----~~---- 73 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI--DPIRGSAFG---EQLGVDS---ERCYAD----YL---- 73 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS--SHHHHHHHH---HHTTCCG---GGBCSS----HH----
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC--CHHHHHHHH---HHhCCCc---ceeeCC----HH----
Confidence 3468999999999 9999999988777899998 8887 454432221 1122100 000000 00
Q ss_pred EEEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 77 ~v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.++. +++. .+.++|.|+-||+.....+.+...+++| |.|++--|
T Consensus 74 ~ll~--~~~~---~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 117 (398)
T 3dty_A 74 SMFE--QEAR---RADGIQAVSIATPNGTHYSITKAALEAG-LHVVCEKP 117 (398)
T ss_dssp HHHH--HHTT---CTTCCSEEEEESCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred HHHh--cccc---cCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEeCC
Confidence 0110 0000 0025899999999999999999999999 46777555
No 96
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.23 E-value=0.00034 Score=65.11 Aligned_cols=99 Identities=25% Similarity=0.219 Sum_probs=65.0
Q ss_pred CCcceEEEEcCCh---hHHHHHHHHHcCCCceEEE-EeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeE
Q 025476 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (252)
Q Consensus 1 m~~~kv~InG~Gr---IGr~v~r~~~~~~~~~iva-ind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i 76 (252)
|+++||||+|+|+ ||+.+++++...+++++++ |.|+ +++....+. ..||--. .+..
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a---~~~g~~~---~~~~------------ 94 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS--TPEKAEASG---RELGLDP---SRVY------------ 94 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS--SHHHHHHHH---HHHTCCG---GGBC------------
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC--CHHHHHHHH---HHcCCCc---cccc------------
Confidence 3468999999999 9999999988888899997 9887 454432221 1122100 0000
Q ss_pred EEEeecCCCCCCCcc-----cCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 77 TVFGVRNPEEIPWAE-----TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 77 ~v~~~~dp~~~~w~~-----~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+ .++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 95 -----~~~~~l-l~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 142 (417)
T 3v5n_A 95 -----SDFKEM-AIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRG-IHVICDKP 142 (417)
T ss_dssp -----SCHHHH-HHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTT-CEEEEESS
T ss_pred -----CCHHHH-HhcccccCCCCcEEEECCCcHHHHHHHHHHHhCC-CeEEEECC
Confidence 011111 000 26899999999999999999999998 45777666
No 97
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.21 E-value=0.0012 Score=57.77 Aligned_cols=33 Identities=30% Similarity=0.598 Sum_probs=29.6
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|||+|+| +|++|+.+.+.+.+.++++++++.|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 4999999 59999999999988878999999876
No 98
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.19 E-value=0.00025 Score=64.69 Aligned_cols=96 Identities=16% Similarity=0.235 Sum_probs=62.0
Q ss_pred CC-cceEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 1 MG-KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 1 m~-~~kv~InG~GrIGr~-v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
|| ++||||+|+|.+|.. ++.++. .+++++++|.|+ +++....+. ..||. . .+
T Consensus 23 Mm~~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~--~~~~a~~~a---~~~~~-----~---------------~~ 76 (361)
T 3u3x_A 23 MMDELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEK--DDALAAEFS---AVYAD-----A---------------RR 76 (361)
T ss_dssp ---CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECS--CHHHHHHHH---HHSSS-----C---------------CE
T ss_pred hccCcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcC--CHHHHHHHH---HHcCC-----C---------------cc
Confidence 44 689999999999964 555554 467999999998 454432211 11110 0 01
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+ .+.+++ ..+.++|.|+-||+.....+.+...+++| |.|++--|
T Consensus 77 ~--~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 120 (361)
T 3u3x_A 77 I--ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKP 120 (361)
T ss_dssp E--SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESC
T ss_pred c--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCC
Confidence 1 111111 11236899999999998889999999999 56888766
No 99
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.15 E-value=0.00064 Score=60.84 Aligned_cols=93 Identities=23% Similarity=0.322 Sum_probs=63.5
Q ss_pred ceEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 4 ~kv~InG~-GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
+||||+|+ |.+|+.+++++.+. +.+++++.|+. .+. +. + +..| + .. +++ .
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~--~~~-~~-~--~~~~---~--~~---------------~~~--~ 54 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPA--TNV-GL-V--DSFF---P--EA---------------EFF--T 54 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSS--CCC-GG-G--GGTC---T--TC---------------EEE--S
T ss_pred eEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCC--HHH-HH-H--HhhC---C--CC---------------cee--C
Confidence 79999999 79999999999877 49999999984 222 11 1 1111 1 01 111 1
Q ss_pred CCCCCC-----C--cccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 83 NPEEIP-----W--AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 83 dp~~~~-----w--~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+.+++. | .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 ~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKP 104 (312)
T 3o9z_A 55 EPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALSEKP 104 (312)
T ss_dssp CHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEECC
Confidence 111110 0 1237899999999999999999999999 56777666
No 100
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.10 E-value=0.00011 Score=66.12 Aligned_cols=97 Identities=11% Similarity=0.090 Sum_probs=62.6
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCC--ChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI--TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~--~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
|| +||||+|+|.+|+.+++++ .+++++++|.|+.. ..+..+..++ .||. .. ++
T Consensus 1 M~-~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~---~~~~----~~---------------~~ 55 (337)
T 3ip3_A 1 MS-LKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAIS---EMNI----KP---------------KK 55 (337)
T ss_dssp -C-EEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHH---TTTC----CC---------------EE
T ss_pred Cc-eEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHH---HcCC----CC---------------cc
Confidence 55 9999999999999888877 67799999999732 1112211110 0110 00 11
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+ .|.+++ ..+.++|.|+-||+.....+.+...+++|. .|++--|
T Consensus 56 ~--~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 99 (337)
T 3ip3_A 56 Y--NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERKI-HAFVEKP 99 (337)
T ss_dssp C--SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EEEECSS
T ss_pred c--CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cEEEeCC
Confidence 1 122221 112368999999999888899999999994 5777666
No 101
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.08 E-value=0.00082 Score=60.27 Aligned_cols=93 Identities=24% Similarity=0.207 Sum_probs=63.8
Q ss_pred ceEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 4 ~kv~InG~-GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
+||||+|+ |.+|+.+++++.+. +.+++++.|+. .+. +. + +..| + .. +++ .
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~--~~~-~~-~--~~~~---~--~~---------------~~~--~ 54 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDIN--DSV-GI-I--DSIS---P--QS---------------EFF--T 54 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSS--CCC-GG-G--GGTC---T--TC---------------EEE--S
T ss_pred eEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCC--HHH-HH-H--HhhC---C--CC---------------cEE--C
Confidence 79999999 79999999999876 59999999984 221 11 1 1111 1 01 111 1
Q ss_pred CCCCCC--------CcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 83 NPEEIP--------WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 83 dp~~~~--------w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+.+++. ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 ~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKP 105 (318)
T 3oa2_A 55 EFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLG-CDVICEKP 105 (318)
T ss_dssp SHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCC-CeEEEECC
Confidence 111110 01347999999999999999999999999 56888766
No 102
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.02 E-value=0.00045 Score=65.68 Aligned_cols=99 Identities=16% Similarity=0.173 Sum_probs=67.4
Q ss_pred CcceEEEEcC----ChhHHHHHHHHHcC-CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeE
Q 025476 2 GKVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (252)
Q Consensus 2 ~~~kv~InG~----GrIGr~v~r~~~~~-~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i 76 (252)
+++||||+|+ |.+|+.+++++.+. +++++++|.|+ +.+....+. ..||- + + +
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~--~~~~a~~~a---~~~g~-~--------~---------~ 94 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP--TLKSSLQTI---EQLQL-K--------H---------A 94 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS--CHHHHHHHH---HHTTC-T--------T---------C
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHH---HHcCC-C--------c---------c
Confidence 3589999999 99999999999887 78999999997 444332111 11110 0 0 0
Q ss_pred EEEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCC-----CEEEEcCC
Q 025476 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVIISAP 126 (252)
Q Consensus 77 ~v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~Ga-----kkViis~p 126 (252)
.++ .+.+++ ..+.++|+|+-||+.....+.+...+++|. |.|++--|
T Consensus 95 ~~~--~d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 146 (479)
T 2nvw_A 95 TGF--DSLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA 146 (479)
T ss_dssp EEE--SCHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred eee--CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCC
Confidence 111 122111 011268999999999888899999999994 77888666
No 103
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.00 E-value=0.00087 Score=60.03 Aligned_cols=96 Identities=14% Similarity=0.205 Sum_probs=60.8
Q ss_pred CCcceEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 1 m~~~kv~InG~GrIGr-~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
|+++||||+|+|.+|. .+++++. .+++++++|.|+ +++....+. ..||. ++ ++
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~-~~~~~lvav~d~--~~~~~~~~a---~~~~~-----~~---------------~~ 55 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLI-DAGAELAGVFES--DSDNRAKFT---SLFPS-----VP---------------FA 55 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHH-HTTCEEEEEECS--CTTSCHHHH---HHSTT-----CC---------------BC
T ss_pred CCccEEEEECCChHHHHHhhhhhc-CCCcEEEEEeCC--CHHHHHHHH---HhcCC-----Cc---------------cc
Confidence 6679999999999996 5667664 356999999998 333221111 11110 00 00
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.|.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 56 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP 98 (336)
T 2p2s_A 56 --ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKP 98 (336)
T ss_dssp --SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred --CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 012268999999999989999999999984 5777666
No 104
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.99 E-value=0.00032 Score=65.74 Aligned_cols=98 Identities=15% Similarity=0.201 Sum_probs=67.2
Q ss_pred cceEEEEcC----ChhHHHHHHHHHcC-CCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEE
Q 025476 3 KVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (252)
Q Consensus 3 ~~kv~InG~----GrIGr~v~r~~~~~-~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~ 77 (252)
++||||+|+ |.+|+.+++++.+. +++++++|.|+ +.+....+. ..||. + + +.
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a---~~~g~-~--------~---------~~ 76 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP--KIETSIATI---QRLKL-S--------N---------AT 76 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS--SHHHHHHHH---HHTTC-T--------T---------CE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHH---HHcCC-C--------c---------ce
Confidence 489999999 99999999999888 78999999998 444321111 11110 0 0 01
Q ss_pred EEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCC-----CEEEEcCC
Q 025476 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVIISAP 126 (252)
Q Consensus 78 v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~Ga-----kkViis~p 126 (252)
++ .+.+++- .+.++|+|+-||+.....+.+...+++|. |.|++--|
T Consensus 77 ~~--~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 127 (438)
T 3btv_A 77 AF--PTLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWA 127 (438)
T ss_dssp EE--SSHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESS
T ss_pred ee--CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCc
Confidence 11 1222211 11368999999999888899999999994 67888665
No 105
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.98 E-value=0.00029 Score=52.47 Aligned_cols=96 Identities=17% Similarity=0.262 Sum_probs=57.7
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
.++|.|.|.|.+|+.+++.+.+.+..+++.++. +.+.+..+.+ .| +. .+..+ ..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~----~~------~~-----~~~~d--------~~ 58 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNR----MG------VA-----TKQVD--------AK 58 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHT----TT------CE-----EEECC--------TT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHh----CC------Cc-----EEEec--------CC
Confidence 379999999999999999998876466655543 3333221110 00 00 00000 01
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEc
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis 124 (252)
+++.+.---.++|+||.|+|.......+...++.|.+.+.++
T Consensus 59 ~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 59 DEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp CHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred CHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEec
Confidence 111110000278999999998877778888889999776554
No 106
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.94 E-value=0.001 Score=59.19 Aligned_cols=93 Identities=20% Similarity=0.224 Sum_probs=61.4
Q ss_pred ceEEEEcCChhHHHH-HHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 4 VKIGINGFGRIGRLV-ARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 4 ~kv~InG~GrIGr~v-~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
+||||+|+|.+|+.+ ++++.+ +++++++|.|+ +.+....+.+ .||... ++ .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~--~~~~~~~~~~---~~g~~~--------------------~~--~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMST--SAERGAAYAT---ENGIGK--------------------SV--T 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECS--CHHHHHHHHH---HTTCSC--------------------CB--S
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECC--CHHHHHHHHH---HcCCCc--------------------cc--C
Confidence 589999999999987 788877 77999999997 4544322111 111000 00 1
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+.+++ ..+.++|+|+.||+.....+.+...+++| |.|++-.|
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~ekP 94 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAG-KHVLCEKP 94 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCC-CeEEEeCC
Confidence 11111 01126899999999988888888899998 45666555
No 107
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.87 E-value=0.0014 Score=57.70 Aligned_cols=131 Identities=20% Similarity=0.192 Sum_probs=78.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~d 83 (252)
|||++.|+|.||+.++|. . ++|++++-+ +.. + .+ |- .. ..|
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~-~leLv~v~~-----~k~---------------g--------el---gv--~a--~~d 53 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G-NFEKIYAYD-----RIS---------------K--------DI---PG--VV--RLD 53 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S-CCSEEEEEC-----SSC---------------C--------CC---SS--SE--ECS
T ss_pred ceEEEECcCHHHHHHHhc---C-CcEEEEEEe-----ccc---------------c--------cc---Cc--ee--eCC
Confidence 799999999999999998 3 699888765 100 1 12 11 11 256
Q ss_pred CCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC--CCCeEEeecCccccC-CCCCe-E-EcCCchhhh
Q 025476 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--DAPMFVVGVNENEYK-PELNI-V-SNASCTTNC 158 (252)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~--d~p~vV~gVN~~~~~-~~~~I-I-S~asCtT~~ 158 (252)
.+.+.. ..|+|+||++..--.++..+.|++|..= +++.... | |-+--.+. +... ...++ + |-+..-.-+
T Consensus 54 ~d~lla---~pD~VVe~A~~~av~e~~~~iL~aG~dv-v~~S~gaLad-~~l~~~L~-~aA~~gg~~l~vpSGAi~GlD~ 127 (253)
T 1j5p_A 54 EFQVPS---DVSTVVECASPEAVKEYSLQILKNPVNY-IIISTSAFAD-EVFRERFF-SELKNSPARVFFPSGAIGGLDV 127 (253)
T ss_dssp SCCCCT---TCCEEEECSCHHHHHHHHHHHTTSSSEE-EECCGGGGGS-HHHHHHHH-HHHHTCSCEEECCCTTCCCHHH
T ss_pred HHHHhh---CCCEEEECCCHHHHHHHHHHHHHCCCCE-EEcChhhhcC-HHHHHHHH-HHHHHCCCeEEecCCcccchhH
Confidence 776652 7899999999876667789999999853 3332221 2 11100000 0011 12222 2 444333222
Q ss_pred HHHHHHHHHhhcCeeEEEEEEEeecCC
Q 025476 159 LAPLAKVIHDKFGIVEGLMTTVHSITA 185 (252)
Q Consensus 159 Lap~lk~L~~~fgI~~~~~tTvha~t~ 185 (252)
++... -+|+++.++|.-+..+
T Consensus 128 ----l~aa~--g~l~~V~~~t~K~P~~ 148 (253)
T 1j5p_A 128 ----LSSIK--DFVKNVRIETIKPPKS 148 (253)
T ss_dssp ----HHHHG--GGEEEEEEEEEECGGG
T ss_pred ----HHHhc--CCccEEEEEEeCChHH
Confidence 33333 6899999999988744
No 108
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.77 E-value=0.0018 Score=55.28 Aligned_cols=93 Identities=18% Similarity=0.133 Sum_probs=63.4
Q ss_pred cceEEEEcCChhHHHHHHHH-HcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGINGFGRIGRLVARVI-LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~-~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
..||+|+|.|.+|+.+++.+ ++. +++++++-|. +++.. .-.++|.+ +...
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~--dp~k~------------------------g~~i~gv~--V~~~ 130 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV--DPEKV------------------------GRPVRGGV--IEHV 130 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES--CTTTT------------------------TCEETTEE--EEEG
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC--CHHHH------------------------hhhhcCCe--eecH
Confidence 36899999999999999863 344 6999999886 33221 11234433 3222
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.+++ ..+ ++|.|+-|++.....+.+...+++|.+.++...|
T Consensus 131 ~dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P 173 (211)
T 2dt5_A 131 DLLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAP 173 (211)
T ss_dssp GGHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred HhHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCc
Confidence 333322 234 7999999999887677788888999987766666
No 109
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.64 E-value=0.0012 Score=60.12 Aligned_cols=97 Identities=13% Similarity=0.175 Sum_probs=61.7
Q ss_pred CCcceEEEEc-CChhHHH-HH----HHHHcCCCceEE---------EEeCCCCChhhhheeeeeecccccCCCcceEEcC
Q 025476 1 MGKVKIGING-FGRIGRL-VA----RVILQRDDVELV---------AVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD 65 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~-v~----r~~~~~~~~~iv---------aind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~ 65 (252)
|+++||||+| +|++|+. ++ +++.+.+.++++ +|.|. +++....+. ..||.
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~--~~~~a~~~a---~~~~~---------- 68 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR--SAEKVEALA---KRFNI---------- 68 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS--SSHHHHHHH---HHTTC----------
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC--CHHHHHHHH---HHhCC----------
Confidence 4568999999 9999997 77 777666655543 67776 444332211 11110
Q ss_pred CeeeEECCeeEEEEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 66 DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 66 ~~~l~i~G~~i~v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
. .++ .|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 69 --~--------~~~--~~~~~l-l~~~~iD~V~i~tp~~~h~~~~~~al~~G-k~V~~EKP 115 (383)
T 3oqb_A 69 --A--------RWT--TDLDAA-LADKNDTMFFDAATTQARPGLLTQAINAG-KHVYCEKP 115 (383)
T ss_dssp --C--------CEE--SCHHHH-HHCSSCCEEEECSCSSSSHHHHHHHHTTT-CEEEECSC
T ss_pred --C--------ccc--CCHHHH-hcCCCCCEEEECCCchHHHHHHHHHHHCC-CeEEEcCC
Confidence 0 011 112111 01126899999999999999999999999 46777555
No 110
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.52 E-value=0.0047 Score=52.87 Aligned_cols=94 Identities=12% Similarity=0.208 Sum_probs=59.6
Q ss_pred cceEEEEcCChhHHHHHHH-HHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGINGFGRIGRLVARV-ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~-~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
..||+|+|.|.+|+.+++. .+...+++++++-|. +++.. .-.++|.+ +...
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~--dp~k~------------------------g~~i~gv~--V~~~ 136 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI--NESKI------------------------GTEVGGVP--VYNL 136 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEES--CTTTT------------------------TCEETTEE--EEEG
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC--CHHHH------------------------HhHhcCCe--eech
Confidence 3689999999999999994 344456999999886 33321 11234433 3222
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCC
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps 127 (252)
.+.+++- .+ . |+|+-|++.....+-+...+++|.+.++...|-
T Consensus 137 ~dl~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 137 DDLEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp GGHHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred hhHHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 3333221 11 3 999999998777778888899999888777773
No 111
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=96.11 E-value=0.0039 Score=57.99 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=59.2
Q ss_pred ceEEEEcC-ChhHHHHHHHHHcCCC-ceEEEE-eCCCCChhhhheeeeeecccccCCCcceEEcCCe---ee--EECCee
Q 025476 4 VKIGINGF-GRIGRLVARVILQRDD-VELVAV-NDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDK---TL--LFGEKP 75 (252)
Q Consensus 4 ~kv~InG~-GrIGr~v~r~~~~~~~-~~ivai-nd~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~---~l--~i~G~~ 75 (252)
+||+|.|+ |.||+.+++.+.+.++ ++++++ .+. +++.+....+ .|+. . .+...+.+ .+ .+.+..
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~--ni~~l~~~~~---~f~~-~--~v~v~d~~~~~~l~~~l~~~~ 76 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR--NVKDLADAAK---RTNA-K--RAVIADPSLYNDLKEALAGSS 76 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS--CHHHHHHHHH---HTTC-S--EEEESCGGGHHHHHHHTTTCS
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC--CHHHHHHHHH---HcCC-c--EEEEcChHHHHHHHHHhccCC
Confidence 79999997 9999999999988775 999988 554 4443322211 0110 0 01001100 00 011111
Q ss_pred EEEEe-ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEE
Q 025476 76 VTVFG-VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (252)
Q Consensus 76 i~v~~-~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkVii 123 (252)
+.++. +.+..++- ... +|+|+++++.+...+..-.++++| |.|++
T Consensus 77 ~~v~~g~~~~~el~-~~~-iDvVV~ai~G~aGl~ptlaAi~aG-K~Vvl 122 (388)
T 1r0k_A 77 VEAAAGADALVEAA-MMG-ADWTMAAIIGCAGLKATLAAIRKG-KTVAL 122 (388)
T ss_dssp SEEEESHHHHHHHH-TSC-CSEEEECCCSGGGHHHHHHHHHTT-SEEEE
T ss_pred cEEEeCccHHHHHH-cCC-CCEEEEeCCCHHHHHHHHHHHHCC-CEEEE
Confidence 22221 11111111 113 799999995566777777888888 45444
No 112
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.06 E-value=0.0041 Score=53.28 Aligned_cols=96 Identities=18% Similarity=0.316 Sum_probs=63.8
Q ss_pred cceEEEEcCChhHHHHHHHH-HcCCCceEEEEeCCCCChh-hhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 3 KVKIGINGFGRIGRLVARVI-LQRDDVELVAVNDPFITTD-YMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~-~~~~~~~ivaind~~~~~~-~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
..+|+|+|.|.+|+.+++.+ ++..+++++++-|. |++ .. |+ =.++|-+ |+.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~--dp~~ki----------G~-------------~~i~Gvp--V~~ 136 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL--DSNDLV----------GK-------------TTEDGIP--VYG 136 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC--TTSTTT----------TC-------------BCTTCCB--EEE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC--Cchhcc----------Cc-------------eeECCeE--EeC
Confidence 36899999999999998874 33446999999876 332 21 11 0123322 322
Q ss_pred ecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 81 ~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
-.+.+++ -.+.++|.++-|++.....+.+....++|.|.++-.+|
T Consensus 137 ~~dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap 181 (212)
T 3keo_A 137 ISTINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSP 181 (212)
T ss_dssp GGGHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCC
Confidence 1222111 12358999999999887777888889999999777777
No 113
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.65 E-value=0.073 Score=45.44 Aligned_cols=33 Identities=12% Similarity=0.205 Sum_probs=27.7
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|++||.|.|.|.||+.+++.+.+++ .+++++..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQG-WRIIGTSR 36 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGT-CEEEEEES
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCC-CEEEEEEc
Confidence 3479999999999999999998876 78777754
No 114
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.28 E-value=0.0065 Score=55.24 Aligned_cols=93 Identities=19% Similarity=0.190 Sum_probs=55.9
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
+|||.|.|.|.+|+.+++.+.+..++. +.|. +.+.+..+-+ .. . .+.+| ..
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~---~~~~--~~~~~~~~~~-----------~~----~-~~~~d--------~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVY---IGDV--NNENLEKVKE-----------FA----T-PLKVD--------AS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEE---EEES--CHHHHHHHTT-----------TS----E-EEECC--------TT
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeE---EEEc--CHHHHHHHhc-----------cC----C-cEEEe--------cC
Confidence 489999999999999999886654443 3332 2222211110 00 0 11111 01
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
|++.+.=--.+.|+|+.|+|.|...+-++..+++|+ -+++.+
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~--~yvD~s 108 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTC--EEEECC
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCc--ceEeee
Confidence 221111001278999999999988888999999998 667654
No 115
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=95.19 E-value=0.028 Score=49.78 Aligned_cols=87 Identities=24% Similarity=0.232 Sum_probs=57.6
Q ss_pred cceEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG~-GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
.+||+|+|+ |++|+.+++.+.+.+ +++++..+|... | . . +.| ++++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g-~~~V~~V~p~~~--------------g-----------~-~--~~G--~~vy-- 53 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYG-TKMVGGVTPGKG--------------G-----------T-T--HLG--LPVF-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTTCT--------------T-----------C-E--ETT--EEEE--
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-CeEEEEeCCCcc--------------c-----------c-e--eCC--eecc--
Confidence 479999997 999999999987764 887766666200 0 0 1 122 1222
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEE
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkVii 123 (252)
.+.++++- +.++|+|+.+++.....+.+...+++|.+.+|+
T Consensus 54 ~sl~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 54 NTVREAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp SSHHHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 12222210 126899999999888888888888999887444
No 116
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.14 E-value=0.024 Score=52.12 Aligned_cols=136 Identities=16% Similarity=0.222 Sum_probs=82.7
Q ss_pred cceEEEEcCChhHHHHHHHHHcCC-CceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~-~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
++||||+|+| +|+.+++++.+.+ ++++++|.|. +.+....+- ..|| ++++
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~--~~~~a~~~a---~~~g---------------------v~~~-- 57 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQ--GSARSRELA---HAFG---------------------IPLY-- 57 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECC--SSHHHHHHH---HHTT---------------------CCEE--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECC--CHHHHHHHH---HHhC---------------------CCEE--
Confidence 4899999999 6999999887665 5999999998 343321111 1111 1122
Q ss_pred cCCCCCCCcccCccEEEecCCCCCC----HHhHHHHHhCCCCEEEEcCC-C-------------CCCCeEEeecCccccC
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVIISAP-S-------------KDAPMFVVGVNENEYK 143 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~----~~~a~~h~~~GakkViis~p-s-------------~d~p~vV~gVN~~~~~ 143 (252)
.|.+++. .++|+|+=||..... .+.+...+++|. -|++--| + .+. .+..|-|+..+.
T Consensus 58 ~~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKPl~~~ea~~l~~~A~~~g~-~~~v~~~yr~~p 132 (372)
T 4gmf_A 58 TSPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHPLHPDDISSLQTLAQEQGC-CYWINTFYPHTR 132 (372)
T ss_dssp SSGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESCCCHHHHHHHHHHHHHHTC-CEEEECSGGGSH
T ss_pred CCHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecCCCHHHHHHHHHHHHHcCC-EEEEcCcccCCH
Confidence 2334332 257888888887766 678889999985 5777666 2 123 344455543211
Q ss_pred ----------------CCCCeEEcCCchhhhHHHHHHHHHhhcCe
Q 025476 144 ----------------PELNIVSNASCTTNCLAPLAKVIHDKFGI 172 (252)
Q Consensus 144 ----------------~~~~IIS~asCtT~~Lap~lk~L~~~fgI 172 (252)
......-.++|+...+-|.+..|....|.
T Consensus 133 ~vr~~i~~~~~l~~~~~~~~~~i~~~~s~q~~y~~~dil~~alg~ 177 (372)
T 4gmf_A 133 AGRTWLRDAQQLRRCLAKTPPVVHATTSRQLLYSTLDLLLLALGV 177 (372)
T ss_dssp HHHHHHHHHHHHHHHHTSCCSEEEEEECTTTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhccCCceEEEEEeccccccchHHHHHHhcCC
Confidence 01111224567788888888888776663
No 117
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=95.06 E-value=0.077 Score=49.00 Aligned_cols=112 Identities=17% Similarity=0.193 Sum_probs=61.5
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeee--EECCeeEE
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTL--LFGEKPVT 77 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l--~i~G~~i~ 77 (252)
|.+.||+|.| +|.||...++.+.+.++++++++.- ..+.+.++...+ .|++ . -+-..+.+.. .+. . .
T Consensus 1 M~~k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a-~~n~~~l~~q~~---~f~p-~--~v~v~~~~~~~~~l~--~-~ 70 (376)
T 3a06_A 1 MEERTLVILGATGSIGTQTLDVLKKVKGIRLIGISF-HSNLELAFKIVK---EFNV-K--NVAITGDVEFEDSSI--N-V 70 (376)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEE-SSCHHHHHHHHH---HHTC-C--EEEECSSCCCCCSSS--E-E
T ss_pred CCcceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEc-cCCHHHHHHHHH---HcCC-C--EEEEccHHHHHHHHH--H-H
Confidence 4446899999 7999999999887766799999932 125555543321 1111 0 0100110000 000 0 0
Q ss_pred EEeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEc
Q 025476 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (252)
Q Consensus 78 v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis 124 (252)
+..++...++- ...++|+|+.++-.+...+-.-..+++| |+|.+.
T Consensus 71 ~~G~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aG-K~vaLA 115 (376)
T 3a06_A 71 WKGSHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHS-KRVCLA 115 (376)
T ss_dssp EESTTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHC-SEEEEC
T ss_pred ccCHHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCC-CEEEEe
Confidence 10000000000 0126899999998888888777888888 566663
No 118
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.03 E-value=0.034 Score=47.73 Aligned_cols=34 Identities=29% Similarity=0.394 Sum_probs=28.2
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|+++||.|.|.|.||+.+++.+.+++ .+++++..
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r 34 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQG-HEVTGLRR 34 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 66679999999999999999998886 67777754
No 119
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=94.80 E-value=0.1 Score=41.13 Aligned_cols=85 Identities=20% Similarity=0.300 Sum_probs=57.9
Q ss_pred cceEEEEcC----ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEE
Q 025476 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (252)
Q Consensus 3 ~~kv~InG~----GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v 78 (252)
..+|+|+|. |.+|+.+++.+.+.+ ++++.+|-- . . . +.|.+ +
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G-~~V~~vnp~---~-------------------------~-~--i~G~~--~ 59 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVNPN---Y-------------------------D-E--IEGLK--C 59 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT---C-------------------------S-E--ETTEE--C
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCC-CEEEEeCCC---C-------------------------C-e--ECCee--e
Confidence 368999999 999999999998776 776666521 0 0 1 12322 2
Q ss_pred EeecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 79 ~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+ .++++++ ..+|+|+-+++.....+-....+++|++.+++..+
T Consensus 60 ~--~s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 60 Y--RSVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp B--SSGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred c--CCHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 2 3455554 26899999988655556666677889998888653
No 120
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.64 E-value=0.022 Score=48.00 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=28.7
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|+++||+|+|+|.+|..+++.+.+.+ .+++.+.|.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g-~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQ-IPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTT-CCEEEECTT
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECC
Confidence 34579999999999999999998775 777765665
No 121
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=94.46 E-value=0.031 Score=51.15 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=30.8
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCC---CceEEEEeCC
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRD---DVELVAVNDP 36 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~---~~~ivaind~ 36 (252)
+++||||+|+|.||+.+++.+.+.+ ++++++|.|.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 3589999999999999999998765 5899999985
No 122
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.63 E-value=0.25 Score=40.51 Aligned_cols=31 Identities=29% Similarity=0.428 Sum_probs=26.5
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|||.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD-YQIYAGAR 32 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS-CEEEEEES
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 3899999 8999999999998876 78777754
No 123
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=93.47 E-value=0.3 Score=38.58 Aligned_cols=85 Identities=16% Similarity=0.185 Sum_probs=58.0
Q ss_pred ceEEEEcC----ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 4 VKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 4 ~kv~InG~----GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
.+|+|+|. |++|..+++.+.+.+ +++..+| |. . .+. . +.|. +++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vn-p~----~---------------------~g~-~--i~G~--~~~ 61 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVS-PK----V---------------------AGK-T--LLGQ--QGY 61 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEEC-SS----S---------------------TTS-E--ETTE--ECC
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeC-Cc----c---------------------ccc-c--cCCe--ecc
Confidence 57999998 899999999987766 7766655 31 0 001 1 1232 232
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ 125 (252)
.++++++ ..+|+|+-|++.....+-....+++|+|.++++.
T Consensus 62 --~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 62 --ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp --SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred --CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 4566665 2789999999876555666667778999988864
No 124
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=93.39 E-value=0.12 Score=40.69 Aligned_cols=86 Identities=13% Similarity=0.115 Sum_probs=57.6
Q ss_pred ceEEEEcC----ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 4 VKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 4 ~kv~InG~----GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
-+|+|+|. |++|+.+++.+.+.+ +++..+| | +.. ++ . +.|. +++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G-~~v~~vn-p----~~~---------------------~~-~--i~G~--~~~ 61 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVN-P----RFQ---------------------GE-E--LFGE--EAV 61 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEEC-G----GGT---------------------TS-E--ETTE--ECB
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCC-CEEEEeC-C----Ccc---------------------cC-c--CCCE--Eec
Confidence 48999998 899999999988776 7766665 3 100 01 1 2232 222
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
.+.++++ ..+|+++-++......+.+....+.|+|.++++.+
T Consensus 62 --~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 62 --ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp --SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred --CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 3444554 26899998888755556666777889999888754
No 125
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.32 E-value=0.13 Score=42.32 Aligned_cols=31 Identities=32% Similarity=0.369 Sum_probs=26.7
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+||.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r 36 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVR 36 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEc
Confidence 6999999 7999999999999886 77777654
No 126
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=93.09 E-value=0.13 Score=43.07 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=27.0
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivain 34 (252)
||+++|.|.| .|.||+.+++.+.+.+..+++++.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~ 55 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFA 55 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEE
Confidence 4557899999 899999999999887656666654
No 127
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.88 E-value=0.14 Score=45.71 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=25.8
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+.+||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 45799999999999988887766553344455554
No 128
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.86 E-value=0.055 Score=46.78 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=27.0
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+++|.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFR 36 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEEC
Confidence 47899999 7999999999998876 77777654
No 129
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=92.83 E-value=0.4 Score=37.78 Aligned_cols=83 Identities=22% Similarity=0.233 Sum_probs=57.4
Q ss_pred ceEEEEcC----ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 4 VKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 4 ~kv~InG~----GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
.+|+|+|. |++|+.+++.+.+.+ ++++.+| |. . + . +.|. +++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vn-p~--~---------~-----------------~--i~G~--~~y 68 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHG-YDVYPVN-PK--Y---------E-----------------E--VLGR--KCY 68 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEEC-TT--C---------S-----------------E--ETTE--ECB
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEEC-CC--C---------C-----------------e--ECCe--ecc
Confidence 57999998 799999999988766 7776665 31 0 0 1 1232 222
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ 125 (252)
.++++++ ..+|+|+=++......+.+....++|+|.++++.
T Consensus 69 --~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 69 --PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp --SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred --CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3455554 2689999998876666777778889999887763
No 130
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=92.60 E-value=0.17 Score=45.68 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=26.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.+|||+|+|+||+.+++.+...+ +++++.+.
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G-~~V~~~dr 168 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALG-MHVIGVNT 168 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHhCC-CEEEEECC
Confidence 58999999999999999998776 78777653
No 131
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.59 E-value=0.13 Score=40.18 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=29.0
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|+..++.|.|+|++|+.+++.+.+.+ .+++.|..
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g-~~V~vid~ 34 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRG-QNVTVISN 34 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 66789999999999999999998776 77777754
No 132
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.53 E-value=0.49 Score=38.27 Aligned_cols=31 Identities=35% Similarity=0.486 Sum_probs=26.7
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|||.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEc
Confidence 4899999 7999999999999887 78777754
No 133
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.38 E-value=0.85 Score=37.66 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=27.3
Q ss_pred CcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 2 ~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+.++|.|-| .|.||+.+++.+.+++ .+++++..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R 53 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG-HEPVAMVR 53 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC-CeEEEEEC
Confidence 457999999 7999999999998886 77777754
No 134
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.18 E-value=0.15 Score=45.53 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=26.2
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCc--eEEEEeCC
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDV--ELVAVNDP 36 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~--~ivaind~ 36 (252)
|.+||+|+|+|.||..+++.+.+.+ + ++++ .|.
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G-~~~~V~~-~dr 66 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSG-FKGKIYG-YDI 66 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTT-CCSEEEE-ECS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC-CCCEEEE-EEC
Confidence 4479999999999999999998776 4 5544 444
No 135
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.18 E-value=0.13 Score=44.44 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=25.2
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
||+|||+|+|.|.+|..+++.+.+.+ .+++.++
T Consensus 1 ~~~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 33 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMGSRLGIMLHQGG-NDVTLID 33 (316)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhCC-CcEEEEE
Confidence 34579999999999999999888776 6765554
No 136
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=92.11 E-value=0.14 Score=43.80 Aligned_cols=32 Identities=13% Similarity=0.181 Sum_probs=26.4
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|||.|.| .|.||+.+++.+.+.++.+++++..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R 33 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVR 33 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEES
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEEC
Confidence 4799999 8999999999988774577777754
No 137
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=91.96 E-value=0.2 Score=45.21 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=26.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.+|||+|+|+||+.+++.+...+ +++++.+.
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~dr 171 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFG-MKVLGVSR 171 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ceEEEEEECHHHHHHHHHHHhCC-CEEEEEcC
Confidence 68999999999999999998776 88777653
No 138
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.88 E-value=0.17 Score=39.15 Aligned_cols=32 Identities=28% Similarity=0.560 Sum_probs=27.1
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+.+|.|.|+|++|+.+++.+.+.+ .+++.+..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g-~~v~vid~ 38 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD-IPLVVIET 38 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 368999999999999999998776 78777754
No 139
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.85 E-value=0.17 Score=38.79 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=26.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.++.|.|+|++|+.+++.+.+.+ .+++.+..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g-~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAG-KKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEEC
Confidence 58999999999999999998776 77777754
No 140
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.72 E-value=0.15 Score=43.35 Aligned_cols=25 Identities=24% Similarity=0.525 Sum_probs=22.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~ 26 (252)
|| +||+|+|+|.+|..+++.+.+.+
T Consensus 1 M~-~~i~iIG~G~mG~~~a~~l~~~g 25 (247)
T 3gt0_A 1 MD-KQIGFIGCGNMGMAMIGGMINKN 25 (247)
T ss_dssp CC-CCEEEECCSHHHHHHHHHHHHTT
T ss_pred CC-CeEEEECccHHHHHHHHHHHhCC
Confidence 55 79999999999999999998776
No 141
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=91.71 E-value=0.13 Score=44.45 Aligned_cols=35 Identities=29% Similarity=0.354 Sum_probs=26.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCC-CceEEEEeCC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRD-DVELVAVNDP 36 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~-~~~ivaind~ 36 (252)
|+++||+|+|+|.+|..+++.+.+.+ +.+++. .|.
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~ 39 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVG-YNR 39 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEE-ECS
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEE-EcC
Confidence 44579999999999999999887653 366544 444
No 142
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.69 E-value=0.16 Score=44.94 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=25.0
Q ss_pred CC-cceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 1 m~-~~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
|| ++||+|+|.|.+|..+++.+.+.+ .+++.+
T Consensus 1 mm~~mki~iiG~G~~G~~~a~~L~~~g-~~V~~~ 33 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGHAFAAYLALKG-QSVLAW 33 (359)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCcCeEEEECCCHHHHHHHHHHHhCC-CEEEEE
Confidence 55 579999999999999999887765 675544
No 143
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.62 E-value=0.16 Score=46.25 Aligned_cols=37 Identities=27% Similarity=0.456 Sum_probs=28.7
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
.+||||+|+|.+|..+++.+.+.+ ++++.. |. +.+.+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~-dr--~~~~~ 58 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG-HECVVY-DL--NVNAV 58 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--CHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCC-CEEEEE-eC--CHHHH
Confidence 479999999999999999998876 776554 44 44443
No 144
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=91.62 E-value=0.56 Score=36.24 Aligned_cols=83 Identities=18% Similarity=0.107 Sum_probs=60.2
Q ss_pred ceEEEEcC----ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 4 VKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 4 ~kv~InG~----GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
-.|+|+|. ++.|..+++.+.+.+ +++++||-- ++. +.|.+ .
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~------------~~~-------------------i~G~~--~- 49 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRK------------KGE-------------------VLGKT--I- 49 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSS------------CSE-------------------ETTEE--C-
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCC------------CCc-------------------CCCee--c-
Confidence 37899994 789999999998876 798888832 111 22322 2
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
-.+.+++| . +|+|+-+++.....+..+...+.|+|.|+++..
T Consensus 50 -y~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G 91 (122)
T 3ff4_A 50 -INERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPG 91 (122)
T ss_dssp -BCSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTT
T ss_pred -cCChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 14566676 3 899999988877777778888899998887644
No 145
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.56 E-value=0.18 Score=43.67 Aligned_cols=29 Identities=28% Similarity=0.462 Sum_probs=24.7
Q ss_pred ceEEEEcC-ChhHHHHHHHHHcCCCceEEEE
Q 025476 4 VKIGINGF-GRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 4 ~kv~InG~-GrIGr~v~r~~~~~~~~~ivai 33 (252)
+||+|+|+ |.+|..+++.+.+.+ ++++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g-~~V~~~ 41 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSA-HHLAAI 41 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSS-SEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CEEEEE
Confidence 69999999 999999999998776 676644
No 146
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=91.45 E-value=0.33 Score=46.13 Aligned_cols=141 Identities=17% Similarity=0.239 Sum_probs=81.0
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC--------CChhhhheeeeeeccc-ccCCCcceEEcCCeeeEECCe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFGEK 74 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~--------~~~~~~ayll~ydS~~-G~~~~~~v~~~~~~~l~i~G~ 74 (252)
.+|+|-|||-+|...++.+.+.+ .++|+|.|.. ++.+.+..|+++-... |... + +.+ . +.|
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~G-akvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~-~---~~~--~--~~~- 322 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHLN-VKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIK-E---YLN--H--SST- 322 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHTT-CEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGG-G---GGG--T--CSS-
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHH-H---HHh--h--cCC-
Confidence 68999999999999999998876 8999999853 3555555555432211 2211 0 000 0 001
Q ss_pred eEEEEeecCCCCCCCcccCccEEEecC-CCCCCHHhHHHHHhCCCCEEEEcCCCCCCCeEEeecCccccCCCCCeEEcCC
Q 025476 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNAS 153 (252)
Q Consensus 75 ~i~v~~~~dp~~~~w~~~~vdiV~e~t-g~f~~~~~a~~h~~~GakkViis~ps~d~p~vV~gVN~~~~~~~~~IIS~as 153 (252)
.+.. +++++ | +..+|+.+-|+ +..++.+.+...++.+|| +|+-+ ++-|+ -++- .+.+. +.+|+=.|.
T Consensus 323 -a~~v---~~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~Eg--AN~p~-T~eA-~~~L~-~rGIl~~PD 390 (470)
T 2bma_A 323 -AKYF---PNEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCI-LVGEG--ANMPS-TVDA-INLFK-SNNIIYCPS 390 (470)
T ss_dssp -CEEC---SSCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCC-EEECC--SSSCB-CHHH-HHHHH-HTTCEEECH
T ss_pred -cEEe---cCcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcE-EEEeC--CCCCC-CHHH-HHHHH-HCCcEEECh
Confidence 0121 22333 8 47899999986 566788899988888886 34432 22332 1111 12222 345655665
Q ss_pred chhhhHHHHHHHH
Q 025476 154 CTTNCLAPLAKVI 166 (252)
Q Consensus 154 CtT~~Lap~lk~L 166 (252)
-.+|+=..+..-+
T Consensus 391 ~~aNAGGV~~S~~ 403 (470)
T 2bma_A 391 KAANAGGVAISGL 403 (470)
T ss_dssp HHHTTHHHHHHHH
T ss_pred HHhhCCCceeeHH
Confidence 5555554444333
No 147
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.26 E-value=0.13 Score=46.13 Aligned_cols=35 Identities=37% Similarity=0.490 Sum_probs=27.0
Q ss_pred CC-cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 1 m~-~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|+ .+||+|+|.|.+|..++..+...+.++ +.+-|.
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di 36 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDI 36 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeC
Confidence 54 369999999999999888887776447 666665
No 148
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=91.20 E-value=0.19 Score=45.70 Aligned_cols=30 Identities=33% Similarity=0.479 Sum_probs=25.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G-~~V~~~d 203 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFG-LAIHYHN 203 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEEeChhHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 7766544
No 149
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.19 E-value=0.26 Score=43.89 Aligned_cols=33 Identities=36% Similarity=0.484 Sum_probs=25.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|||+|+|.|.||..++-.+..++-+.-+++-|.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di 33 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 599999999999998887776665544455555
No 150
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=91.17 E-value=0.18 Score=45.29 Aligned_cols=30 Identities=27% Similarity=0.361 Sum_probs=25.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G-~~V~~~d 169 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWG-FPLRCWS 169 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEc
Confidence 68999999999999999997765 7776654
No 151
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=91.15 E-value=0.19 Score=45.42 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=25.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G-~~V~~~d 171 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFG-MKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred ceEEEECcCHHHHHHHHHHHHCc-CEEEEEC
Confidence 68999999999999999998776 7766554
No 152
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=91.13 E-value=0.19 Score=43.48 Aligned_cols=32 Identities=31% Similarity=0.633 Sum_probs=25.4
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+|||+|+|+|.+|+.+++.+...+ .+++ +.|.
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g-~~V~-~~~~ 36 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAG-YSLV-VSDR 36 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTT-CEEE-EECS
T ss_pred cceEEEECchHHHHHHHHHHHhCC-CEEE-EEeC
Confidence 379999999999999999988775 6754 4444
No 153
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=91.06 E-value=0.073 Score=49.19 Aligned_cols=151 Identities=15% Similarity=0.162 Sum_probs=77.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCc-eEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~-~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
+||+|.|.|.||+.+++.+.+.+++ ..+.+.+. +.+....+.+ . ++... +. . +...+ -
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r--~~~~~~~la~--~-l~~~~-------~~-~-------~~~~~-~ 60 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASR--TLSKCQEIAQ--S-IKAKG-------YG-E-------IDITT-V 60 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEES--CHHHHHHHHH--H-HHHTT-------CC-C-------CEEEE-C
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEEC--CHHHHHHHHH--H-hhhhc-------CC-c-------eEEEE-e
Confidence 4999999999999999999888765 44555554 3333222211 0 11000 00 0 11111 1
Q ss_pred CCCC---CC--CcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCC---CCCCeEEeecC---ccccC-CCCCeEE
Q 025476 83 NPEE---IP--WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS---KDAPMFVVGVN---ENEYK-PELNIVS 150 (252)
Q Consensus 83 dp~~---~~--w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps---~d~p~vV~gVN---~~~~~-~~~~IIS 150 (252)
|..+ +. ..+.++|+|+.|+|.+.....+...+++|+. +++..+ ++...+.+..- .+..+ ....++.
T Consensus 61 D~~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~--vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~ 138 (405)
T 4ina_A 61 DADSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVP--YLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALL 138 (405)
T ss_dssp CTTCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCC--EEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEE
T ss_pred cCCCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCC--EEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEE
Confidence 1111 10 1112479999999998877778888999985 343221 11111211110 01111 1345677
Q ss_pred cCCchhhhHHHHHHHHHhh-cC-eeEEEE
Q 025476 151 NASCTTNCLAPLAKVIHDK-FG-IVEGLM 177 (252)
Q Consensus 151 ~asCtT~~Lap~lk~L~~~-fg-I~~~~~ 177 (252)
+..|.-......+..+.++ |+ +++..+
T Consensus 139 g~G~~PG~~~l~a~~~~~~~~~~i~~i~i 167 (405)
T 4ina_A 139 GSGFDPGVTNVFCAYAQKHYFDEIHEIDI 167 (405)
T ss_dssp CCBTTTBHHHHHHHHHHHHTCSEEEEEEE
T ss_pred cCCCCccHHHHHHHHHHHhccCcccEEEE
Confidence 7766544444444444443 55 565555
No 154
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.05 E-value=0.16 Score=43.15 Aligned_cols=26 Identities=31% Similarity=0.639 Sum_probs=22.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~ 26 (252)
|+.+||+|+|+|.+|..+++.+.+.+
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g 27 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANAN 27 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC
Confidence 55689999999999999999887655
No 155
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.05 E-value=0.27 Score=36.98 Aligned_cols=31 Identities=26% Similarity=0.530 Sum_probs=25.7
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.|+|.|.|+|++|+.+++.+.+.+ .+++.+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g-~~v~~~d 34 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG-HDIVLID 34 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 369999999999999999998776 7766664
No 156
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=90.92 E-value=0.24 Score=44.12 Aligned_cols=30 Identities=20% Similarity=0.455 Sum_probs=24.9
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 154 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALG-AQVRGFS 154 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEC
Confidence 68999999999999999987766 7765543
No 157
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.81 E-value=0.2 Score=43.80 Aligned_cols=26 Identities=19% Similarity=0.289 Sum_probs=22.8
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~ 26 (252)
|+++||+|+|.|.+|..+++.+.+.+
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g 26 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANG 26 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCC
Confidence 66789999999999999999998776
No 158
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.77 E-value=0.26 Score=42.88 Aligned_cols=39 Identities=23% Similarity=0.275 Sum_probs=29.5
Q ss_pred CCc-ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 1 MGK-VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 1 m~~-~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
||+ .||+|+|.|.+|..+++.+...+ ++++. .|. +.+.+
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G-~~V~l-~d~--~~~~~ 40 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHG-FAVTA-YDI--NTDAL 40 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECS--SHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCC-CeEEE-EeC--CHHHH
Confidence 664 58999999999999999988776 67554 455 44443
No 159
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=90.72 E-value=0.22 Score=44.78 Aligned_cols=30 Identities=27% Similarity=0.634 Sum_probs=25.0
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d 176 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMG-ATVIGED 176 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999988765 7765543
No 160
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.69 E-value=0.69 Score=40.69 Aligned_cols=31 Identities=32% Similarity=0.371 Sum_probs=24.2
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|+|||+|+|.|.+|..+...+. .+ .++..+.
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g-~~V~~~~ 31 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LY-HDVTVVT 31 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TT-SEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cC-CceEEEE
Confidence 3489999999999999988887 54 6665554
No 161
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=90.60 E-value=0.53 Score=40.57 Aligned_cols=67 Identities=22% Similarity=0.217 Sum_probs=47.8
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
||.+|+| .||+|+.+.+.+ +.+++++++.-|.. + . .
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~~----------------------------~-~-------------~ 49 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDVN----------------------------G-V-------------E 49 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEETT----------------------------E-E-------------E
T ss_pred ceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcCC----------------------------C-c-------------c
Confidence 6999999 599999998865 45569988875531 0 0 0
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCE
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKK 120 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~Gakk 120 (252)
+. . ++|+|+|-|-.....+.++..++.|.+-
T Consensus 50 ~l-----~--~~DVvIDFT~P~a~~~~~~~~~~~g~~~ 80 (228)
T 1vm6_A 50 EL-----D--SPDVVIDFSSPEALPKTVDLCKKYRAGL 80 (228)
T ss_dssp EC-----S--CCSEEEECSCGGGHHHHHHHHHHHTCEE
T ss_pred cc-----c--CCCEEEECCCHHHHHHHHHHHHHcCCCE
Confidence 01 1 4688998777777778888888888753
No 162
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.48 E-value=0.25 Score=42.76 Aligned_cols=32 Identities=31% Similarity=0.531 Sum_probs=25.9
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
++||+|+|+|.+|+.+++.+.+.+ ++++ +.|.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g-~~V~-~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEG-VTVY-AFDL 35 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTT-CEEE-EECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CeEE-EEeC
Confidence 479999999999999999988765 6755 4444
No 163
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=90.45 E-value=0.24 Score=44.61 Aligned_cols=30 Identities=20% Similarity=0.479 Sum_probs=25.0
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d 175 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFG-AKVIAYD 175 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999987765 7765543
No 164
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=90.36 E-value=0.28 Score=44.73 Aligned_cols=30 Identities=30% Similarity=0.486 Sum_probs=25.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~d 190 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFG-MNVLVWG 190 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHhCC-CEEEEEC
Confidence 68999999999999999998776 7766654
No 165
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=90.35 E-value=0.29 Score=44.49 Aligned_cols=30 Identities=27% Similarity=0.418 Sum_probs=25.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G-~~V~~~d 198 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFG-FNVLFYD 198 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEC
Confidence 68999999999999999998765 7765543
No 166
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=90.32 E-value=0.25 Score=44.91 Aligned_cols=30 Identities=27% Similarity=0.565 Sum_probs=25.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G-~~V~~~d 178 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMG-AKVIAYD 178 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CeEEEEecCHHHHHHHHHHhhCC-CEEEEEC
Confidence 58999999999999999998776 7766554
No 167
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=90.29 E-value=0.3 Score=44.20 Aligned_cols=30 Identities=33% Similarity=0.545 Sum_probs=25.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G-~~V~~~d 195 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFG-MKTIGYD 195 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999987665 7766554
No 168
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=90.26 E-value=0.27 Score=44.69 Aligned_cols=29 Identities=28% Similarity=0.397 Sum_probs=24.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
.+|||+|+|+||+.+++.+...+ +++++.
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G-~~V~~~ 200 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFG-MSVRYW 200 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 68999999999999999987665 775544
No 169
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=90.15 E-value=0.28 Score=43.92 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=25.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 176 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFD-MDIDYFD 176 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999988665 7766554
No 170
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=90.14 E-value=0.26 Score=44.51 Aligned_cols=29 Identities=31% Similarity=0.466 Sum_probs=24.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
.++||+|+|+||+.+++.+...+ +++++.
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg-~~v~~~ 170 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFG-MKVLCY 170 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred cEEEEECcchHHHHHHHhhcccC-ceeeec
Confidence 58999999999999999887776 776654
No 171
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=90.12 E-value=0.24 Score=45.10 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=25.0
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G-~~V~~~d 194 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFG-CNLLYHD 194 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC-CEEEEEC
T ss_pred CEEeEEEeCHHHHHHHHHHHHCC-CEEEEeC
Confidence 58999999999999999997665 7765544
No 172
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=90.06 E-value=0.31 Score=43.46 Aligned_cols=30 Identities=33% Similarity=0.572 Sum_probs=24.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 174 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFG-MRVVYHA 174 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999988766 7765443
No 173
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.00 E-value=0.45 Score=41.71 Aligned_cols=30 Identities=30% Similarity=0.389 Sum_probs=23.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCc-eEEEE
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAV 33 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~-~ivai 33 (252)
|||+|+|.|.+|..++..+...+.+ +++.+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~ 38 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 6999999999999998888776633 55433
No 174
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=89.93 E-value=0.067 Score=46.44 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=21.1
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|| |||+|+|+|.+|..+++.+.+. ++++.+.|.
T Consensus 1 M~-m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~ 33 (276)
T 2i76_A 1 MS-LVLNFVGTGTLTRFFLECLKDR--YEIGYILSR 33 (276)
T ss_dssp ----CCEEESCCHHHHHHHHTTC------CCCEECS
T ss_pred CC-ceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeC
Confidence 55 7999999999999998877544 555445554
No 175
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=89.92 E-value=0.26 Score=43.77 Aligned_cols=30 Identities=33% Similarity=0.550 Sum_probs=25.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~d 152 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFG-MRVIAYT 152 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred chheeeccCchhHHHHHHHHhhC-cEEEEEe
Confidence 68999999999999999987665 7766654
No 176
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=89.90 E-value=0.22 Score=44.87 Aligned_cols=30 Identities=23% Similarity=0.323 Sum_probs=24.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G-~~V~~~d 175 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWG-ATLQYHE 175 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSC-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEC
Confidence 68999999999999999886665 7765543
No 177
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.90 E-value=0.31 Score=42.73 Aligned_cols=37 Identities=24% Similarity=0.364 Sum_probs=28.5
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
++||+|+|+|.+|..+++.+.+.+ .+++.. |. +.+.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~-dr--~~~~~ 43 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG-LSTWGA-DL--NPQAC 43 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--CHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CeEEEE-EC--CHHHH
Confidence 479999999999999999998876 676555 44 44443
No 178
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=89.85 E-value=0.26 Score=45.22 Aligned_cols=30 Identities=30% Similarity=0.585 Sum_probs=24.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG-~~V~~~d 206 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFR-ARIRVFD 206 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSC-CEEEEEC
T ss_pred CEEEEecCCcccHHHHHhhhhCC-CEEEEEC
Confidence 58999999999999999887665 7766543
No 179
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=89.68 E-value=0.25 Score=44.29 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=25.7
Q ss_pred CCcc-eEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKV-KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~-kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
||+| ||+|+|.|.+|..++..+.+.+ .+++.++
T Consensus 12 ~m~M~kI~iIG~G~mG~~la~~L~~~G-~~V~~~~ 45 (366)
T 1evy_A 12 LLYLNKAVVFGSGAFGTALAMVLSKKC-REVCVWH 45 (366)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHTTTE-EEEEEEC
T ss_pred hhccCeEEEECCCHHHHHHHHHHHhCC-CEEEEEE
Confidence 4545 9999999999999999887665 6655543
No 180
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=89.67 E-value=0.35 Score=43.01 Aligned_cols=30 Identities=37% Similarity=0.609 Sum_probs=25.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d 172 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALG-MNILLYD 172 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred ceEEEEccCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999988776 7765554
No 181
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.50 E-value=0.38 Score=42.69 Aligned_cols=32 Identities=25% Similarity=0.300 Sum_probs=24.9
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
|.+||+|+|+|.+|..+++.+.+.+..+++..
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~ 54 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAY 54 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEE
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEE
Confidence 34799999999999999999887642555444
No 182
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.44 E-value=0.26 Score=43.15 Aligned_cols=30 Identities=20% Similarity=0.370 Sum_probs=25.1
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
.+||+|+|+|.+|..+++.+.+.+ ++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G-~~V~~~ 44 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP-GGVTVY 44 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST-TCEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC-CeEEEE
Confidence 479999999999999999988775 676555
No 183
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=89.44 E-value=0.35 Score=45.14 Aligned_cols=33 Identities=30% Similarity=0.563 Sum_probs=29.6
Q ss_pred ceEEEEcCChhHHHHHHHHHc-CCCceEEEEeCCC
Q 025476 4 VKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPF 37 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~-~~~~~ivaind~~ 37 (252)
.+|+|.|||+||+.+++.+.+ .+ +++++++|+.
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~G-~kVv~~sD~~ 246 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDFG-MKVVAVSDSK 246 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEEEECSS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhcC-CEEEEEeCCC
Confidence 589999999999999999887 65 9999999874
No 184
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=89.43 E-value=0.35 Score=42.06 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=28.0
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
+||+|+|+|.+|..+++.+.+.+ ++++.. |. +.+..
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~-d~--~~~~~ 39 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG-YLLNVF-DL--VQSAV 39 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEE-CS--SHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCC-CeEEEE-cC--CHHHH
Confidence 59999999999999999998876 676555 44 44443
No 185
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=89.39 E-value=0.33 Score=43.67 Aligned_cols=30 Identities=17% Similarity=0.450 Sum_probs=25.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d 176 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFG-AKVITYD 176 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999988765 7766554
No 186
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.36 E-value=0.32 Score=45.12 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=25.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.++||+|+|+||+.+++.+...+ +++++.+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G-~~V~~~d 175 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLG-MYVYFYD 175 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEc
Confidence 58999999999999999998776 7766554
No 187
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.30 E-value=0.33 Score=40.46 Aligned_cols=31 Identities=26% Similarity=0.384 Sum_probs=24.7
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+||+|+|+|.+|+.+++.+.+.+ .+++.++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g-~~V~~~~ 58 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG-FKVVVGS 58 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC-CEEEEEe
Confidence 369999999999999999988765 5655443
No 188
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=89.28 E-value=0.35 Score=43.17 Aligned_cols=30 Identities=37% Similarity=0.588 Sum_probs=25.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 172 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMG-MKVLAYD 172 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEC
Confidence 68999999999999999988776 7766554
No 189
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.22 E-value=0.21 Score=44.84 Aligned_cols=35 Identities=29% Similarity=0.397 Sum_probs=25.9
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|..+||+|+|.|.+|..++..+...+-.++ .+-|.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v-~l~Di 37 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDV-VLFDI 37 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEE-EEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceE-EEEeC
Confidence 556899999999999999888876652254 34444
No 190
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.21 E-value=0.27 Score=41.96 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=26.9
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|||+|+|+|.+|+.+++.+.+.+ +++|.+.|.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g-~~~v~~~~~ 42 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKG-FRIVQVYSR 42 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CCEEEEECS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCC-CeEEEEEeC
Confidence 69999999999999999887665 776667665
No 191
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.21 E-value=0.41 Score=40.69 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=25.8
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
+.+||+|+|+|.+|..+++.+.+.+ .+++..+
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G-~~V~~~~ 49 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLG-HEVTIGT 49 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 3479999999999999999998776 6765543
No 192
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=89.02 E-value=0.34 Score=42.75 Aligned_cols=32 Identities=34% Similarity=0.532 Sum_probs=26.1
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|.-|||++|+|.+|..+++++.+.+ +++++-|
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G-~~V~v~d 35 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAG-YELVVWN 35 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTT-CEEEEC-
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCC-CeEEEEe
Confidence 3359999999999999999999876 7766544
No 193
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=89.02 E-value=0.41 Score=42.27 Aligned_cols=87 Identities=16% Similarity=0.192 Sum_probs=55.8
Q ss_pred cceEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG~-GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
..||+|.|. |+.|+.+++.+.+.+ +++++-.+|... +. . +.| ++++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g-~~~v~~VnP~~~-------------------------g~-~--i~G--~~vy-- 53 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYG-TKIVAGVTPGKG-------------------------GM-E--VLG--VPVY-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTTCT-------------------------TC-E--ETT--EEEE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcC-CeEEEEECCCCC-------------------------Cc-e--ECC--EEee--
Confidence 369999996 999999999887764 887654445200 00 1 222 2232
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEE
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkVii 123 (252)
.+.++++- +..+|+++.+++.....+.+...+++|.+.+|+
T Consensus 54 ~sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 54 DTVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp SSHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 12222211 126789998888877777788888899986665
No 194
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.00 E-value=0.35 Score=42.53 Aligned_cols=37 Identities=16% Similarity=0.434 Sum_probs=28.5
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
.+||+|+|+|.+|..+++.+.+.+ ++++.. |. +.+..
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G-~~V~~~-dr--~~~~~ 45 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG-KRVAIW-NR--SPGKA 45 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--SHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEE-eC--CHHHH
Confidence 369999999999999999998776 676554 44 44443
No 195
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.98 E-value=0.4 Score=42.23 Aligned_cols=31 Identities=16% Similarity=0.467 Sum_probs=25.9
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+||+|+|+|.+|..+++.+.+.+ ++++.. |.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G-~~V~~~-dr 52 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNG-FKVTVW-NR 52 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEECccHHHHHHHHHHHHCC-CeEEEE-eC
Confidence 69999999999999999998876 676554 44
No 196
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=88.96 E-value=0.36 Score=44.52 Aligned_cols=30 Identities=17% Similarity=0.351 Sum_probs=25.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~d 146 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLG-WKVLVCD 146 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHCC-CEEEEEc
Confidence 68999999999999999988776 7766543
No 197
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=88.94 E-value=0.39 Score=43.49 Aligned_cols=30 Identities=27% Similarity=0.398 Sum_probs=24.8
Q ss_pred ceEEEEcCChhHHHHHHHHH-cCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVIL-QRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~-~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+. ..+ +++++.+
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G-~~V~~~d 194 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLG-MKLVYYD 194 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHhcC-CEEEEEC
Confidence 58999999999999999987 665 7765543
No 198
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.92 E-value=0.26 Score=43.97 Aligned_cols=34 Identities=12% Similarity=0.234 Sum_probs=24.8
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di 39 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDA 39 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 3699999999999998887765553333445554
No 199
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=88.92 E-value=0.37 Score=44.55 Aligned_cols=30 Identities=20% Similarity=0.374 Sum_probs=25.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G-~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALG-IRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998776 7876653
No 200
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=88.85 E-value=0.9 Score=42.75 Aligned_cols=34 Identities=32% Similarity=0.598 Sum_probs=30.3
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~ 37 (252)
..+|+|-|||-+|+.+++.+.+.+ .++|+|.|..
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~G-akvVavsD~~ 268 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDHG-ARVVAVQDHT 268 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECSS
T ss_pred CCEEEEeccCHHHHHHHHHHHHCC-CEEEEEEcCC
Confidence 468999999999999999998876 9999999973
No 201
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=88.84 E-value=0.38 Score=43.07 Aligned_cols=30 Identities=33% Similarity=0.530 Sum_probs=24.9
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
++|||+|+|+||+.+++.+...+ +++++.+
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d 185 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFG-VQRFLYT 185 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEC
Confidence 68999999999999999987665 6765554
No 202
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.65 E-value=0.35 Score=43.61 Aligned_cols=29 Identities=34% Similarity=0.462 Sum_probs=23.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
.+|||+|+|+||+.+++.+...+ +++++.
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G-~~V~~~ 193 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFD-CPISYF 193 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999987665 665443
No 203
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.62 E-value=0.59 Score=36.52 Aligned_cols=30 Identities=33% Similarity=0.468 Sum_probs=25.9
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|.|.|+|++|+.+++.+.+.+ .+++.+.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g-~~V~vid 49 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSG-HSVVVVD 49 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 68999999999999999998776 6777664
No 204
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=88.62 E-value=0.5 Score=41.86 Aligned_cols=86 Identities=22% Similarity=0.249 Sum_probs=54.6
Q ss_pred ceEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 4 ~kv~InG~-GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
.+++|.|. |+.|+.+++.+.+.+ +++++-.+|... +. . +.| ++++ .
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g-~~~V~~VnP~~~-------------------------g~-~--i~G--~~vy--~ 60 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECG-TKIVGGVTPGKG-------------------------GQ-N--VHG--VPVF--D 60 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT-CCEEEEECTTCT-------------------------TC-E--ETT--EEEE--S
T ss_pred CEEEEECCCCCHHHHHHHHHHhCC-CeEEEEeCCCCC-------------------------Cc-e--ECC--Eeee--C
Confidence 68899995 999999999998764 776544335200 00 1 122 2232 2
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEE
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkVii 123 (252)
+.++++- +..+|+++.+++.....+.+...+++|++.+|+
T Consensus 61 sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 61 TVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 2222221 125789998888877778888888899886555
No 205
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=88.50 E-value=0.81 Score=43.26 Aligned_cols=139 Identities=15% Similarity=0.266 Sum_probs=77.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC--------CChhhhheeeeeecccc-cCCCcceEEcCCeeeEECCe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKYDSVHG-QWKHHELKVKDDKTLLFGEK 74 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~--------~~~~~~ayll~ydS~~G-~~~~~~v~~~~~~~l~i~G~ 74 (252)
.+|+|-|||-+|...++.+.+.+ .++|+|.|.. +|++.+..+.++...++ +.. .-+ +.. .+.+
T Consensus 240 ~~VaVQG~GnVG~~aa~~L~e~G-akvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~-~~~--~~~----~~a~ 311 (456)
T 3r3j_A 240 KKCLVSGSGNVAQYLVEKLIEKG-AIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLK-EYL--KYS----KTAK 311 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGG-GGG--GTC----SSCE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchh-hhh--hcC----CCce
Confidence 58999999999999999887765 7888888853 34555544433222111 111 000 000 0111
Q ss_pred eEEEEeecCCCCCCCcccCccEEEecC-CCCCCHHhHHHHHhCCCCEEEEcCCCCCCCeEEeecCccccCCCCCeEEcCC
Q 025476 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNAS 153 (252)
Q Consensus 75 ~i~v~~~~dp~~~~w~~~~vdiV~e~t-g~f~~~~~a~~h~~~GakkViis~ps~d~p~vV~gVN~~~~~~~~~IIS~as 153 (252)
. + ++++ .|. ..+|+.+=|+ +.-++.+.++.-++.+|| +|+-+ ++-|+ -++- .+.+. +.+|+=.|.
T Consensus 312 ~--v----~~~~-i~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~Eg--AN~p~-T~eA-~~iL~-~rGI~~~PD 377 (456)
T 3r3j_A 312 Y--F----ENQK-PWN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIVEG--ANMPT-HIKA-LHKLK-QNNIILCPS 377 (456)
T ss_dssp E--E----CSCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEECC--SSSCB-CTTH-HHHHH-TTTCEEECH
T ss_pred E--e----CCcc-ccc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEEec--CCCCC-CHHH-HHHHH-HCCCEEeCh
Confidence 1 1 2333 264 6899999985 567788888877777885 34532 22231 1111 12222 455666666
Q ss_pred chhhhHHHHHH
Q 025476 154 CTTNCLAPLAK 164 (252)
Q Consensus 154 CtT~~Lap~lk 164 (252)
-.+|+=..+..
T Consensus 378 ~~aNAGGV~vS 388 (456)
T 3r3j_A 378 KAANAGGVAVS 388 (456)
T ss_dssp HHHTTHHHHHH
T ss_pred HHhcCCceeee
Confidence 66665554443
No 206
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=88.49 E-value=0.42 Score=42.98 Aligned_cols=30 Identities=37% Similarity=0.585 Sum_probs=24.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G-~~V~~~d 176 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFG-VKLYYWS 176 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEC
Confidence 68999999999999999987665 7765443
No 207
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=88.45 E-value=0.47 Score=42.58 Aligned_cols=30 Identities=30% Similarity=0.517 Sum_probs=25.0
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
++|||+|+|+||+.+++.+...+ +++++.+
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d 180 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFN-MRILYYS 180 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhCC-CEEEEEC
Confidence 68999999999999999988766 7765543
No 208
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=88.40 E-value=0.47 Score=41.98 Aligned_cols=31 Identities=26% Similarity=0.291 Sum_probs=25.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+||+|+|+|.+|+.+++.+.+.+ ++++.. |.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~-dr 62 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAG-YALQVW-NR 62 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEECccHHHHHHHHHHHhCC-CeEEEE-cC
Confidence 69999999999999999998776 775544 44
No 209
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=88.37 E-value=0.33 Score=40.21 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=26.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|||.|.|+|++|+.+++.+.+.+ .+++.+..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g-~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK-YGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 48999999999999999998775 77777753
No 210
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.37 E-value=0.4 Score=38.44 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=26.3
Q ss_pred cceEEEEcCChhHHHHHHHHHcC-CCceEEEEeC
Q 025476 3 KVKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~-~~~~ivaind 35 (252)
..+|.|.|+|++|+.+++.+.+. + .++++++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid~ 71 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG-KISLGIEI 71 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC-SCEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC-CeEEEEEC
Confidence 35899999999999999998776 5 67777653
No 211
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=88.33 E-value=0.35 Score=41.67 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=25.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|||+|+|+|.+|+.+++.+.+.+ .+++..+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAG-HQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTT-CEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCC-CEEEEEc
Confidence 69999999999999999988765 7766554
No 212
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.32 E-value=0.49 Score=40.59 Aligned_cols=32 Identities=19% Similarity=0.194 Sum_probs=24.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCC-ceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDD-VELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~-~~ivaind~ 36 (252)
+||+|+|+|.+|..+++.+.+.+. .+++. .|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-YDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEE-ECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEE-EeC
Confidence 489999999999999999887651 26544 444
No 213
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=88.30 E-value=0.43 Score=44.17 Aligned_cols=30 Identities=33% Similarity=0.439 Sum_probs=25.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|||+|+|+||+.+++.+...+ +++++.+
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G-~~V~~~d 221 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFD-VHLHYTD 221 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHhCC-CEEEEEc
Confidence 68999999999999999987665 7766554
No 214
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=88.26 E-value=0.49 Score=44.67 Aligned_cols=140 Identities=17% Similarity=0.241 Sum_probs=79.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC--------C-Chhhhheeeeeeccc-ccCCCcceEEcCCeeeEECC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------I-TTDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFGE 73 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~--------~-~~~~~ayll~ydS~~-G~~~~~~v~~~~~~~l~i~G 73 (252)
.+|+|-|||-+|..+++.+.+.+ .++|+|.|.. + +++.+..|++|-... |.+. . +. + .+ +.
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~G-akvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~-~---y~-~-~~--~a 301 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAELG-AKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQ-D---YA-D-KF--GV 301 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHT-CEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTH-H---HH-H-HH--TC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChh-h---cc-c-cc--CC
Confidence 68999999999999999887775 8999998842 2 333444444432211 2221 0 00 0 11 11
Q ss_pred eeEEEEeecCCCCCCCcccCccEEEecC-CCCCCHHhHHHHHhCCCCEEEEcCCCCCCCeEEeecCccccCCCC-CeEEc
Q 025476 74 KPVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL-NIVSN 151 (252)
Q Consensus 74 ~~i~v~~~~dp~~~~w~~~~vdiV~e~t-g~f~~~~~a~~h~~~GakkViis~ps~d~p~vV~gVN~~~~~~~~-~IIS~ 151 (252)
+. + +++++ | +..+|+.+-|+ +..++.+.+......||| +|+-+. +-|+- ++- .+.|. .. +|+=+
T Consensus 302 ~~--i----~~~e~-~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~EgA--N~p~T-~eA-~~~l~-~~~Gi~~~ 367 (449)
T 1bgv_A 302 QF--F----PGEKP-W-GQKVDIIMPCATQNDVDLEQAKKIVANNVK-YYIEVA--NMPTT-NEA-LRFLM-QQPNMVVA 367 (449)
T ss_dssp EE--E----ETCCG-G-GSCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEECCS--SSCBC-HHH-HHHHH-HCTTCEEE
T ss_pred EE--e----Cchhh-h-cCCcceeeccccccccchhhHHHHHhcCCe-EEEeCC--CCcCC-HHH-HHHHH-HcCCEEEE
Confidence 22 1 12333 7 47899999986 567788999888878986 445332 33321 111 12232 23 56666
Q ss_pred CCchhhhHHHHHHHH
Q 025476 152 ASCTTNCLAPLAKVI 166 (252)
Q Consensus 152 asCtT~~Lap~lk~L 166 (252)
|.-..|+-.....-+
T Consensus 368 PD~~aNaGGV~~S~~ 382 (449)
T 1bgv_A 368 PSKAVNAGGVLVSGF 382 (449)
T ss_dssp CHHHHTTHHHHHHHH
T ss_pred ChHHhcCCCceeehh
Confidence 655556554444333
No 215
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.13 E-value=0.43 Score=42.46 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=25.9
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|+.+||+|+|.|.+|..++..+.+.+ .+++.++
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g-~~V~~~~ 33 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAG-EAINVLA 33 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC-CEEEEEE
Confidence 66689999999999999999887765 5555444
No 216
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=88.06 E-value=0.97 Score=42.35 Aligned_cols=34 Identities=24% Similarity=0.555 Sum_probs=30.0
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~ 37 (252)
..+|+|-|||-+|...++.+.+.+ .++|+|.|..
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~G-akVVavsD~~ 254 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDAG-AKVIGISDAN 254 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT-CEEEEEECSS
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 368999999999999999888775 8999999975
No 217
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=88.00 E-value=0.41 Score=42.41 Aligned_cols=24 Identities=17% Similarity=0.329 Sum_probs=21.5
Q ss_pred cceEEEEcCChhHHHHHHHHHcCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRD 26 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~ 26 (252)
+|||+|+|+|.+|..+++.+.+.+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G 45 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAG 45 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC
Confidence 579999999999999999987765
No 218
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.98 E-value=0.42 Score=44.96 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=26.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|.++||||+|+|.+|..+++.+.+.+ +++...+
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G-~~V~v~d 35 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRG-YTVAIYN 35 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCC-CEEEEEc
Confidence 44579999999999999999998776 6754443
No 219
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=87.98 E-value=0.46 Score=41.55 Aligned_cols=30 Identities=23% Similarity=0.366 Sum_probs=24.7
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
.+||+|+|+|.+|+.+++.+.+.+ .+++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g-~~V~~~ 59 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG-HTVTVW 59 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CEEEEE
Confidence 379999999999999999988765 665444
No 220
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=87.91 E-value=0.42 Score=40.97 Aligned_cols=28 Identities=18% Similarity=0.288 Sum_probs=23.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
+||+|+|+|.+|..+++.+.+ + .+++.+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g-~~V~~~ 29 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-R-FPTLVW 29 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-T-SCEEEE
T ss_pred CeEEEEcccHHHHHHHHHHhC-C-CeEEEE
Confidence 489999999999999998887 5 776544
No 221
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=87.88 E-value=2.6 Score=40.30 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=28.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+|+|-|||-+|...++.+.+.+ .++|+|.|.
T Consensus 245 ~tVaVQG~GNVG~~aa~~L~e~G-akVVavsDs 276 (501)
T 3mw9_A 245 KTFVVQGFGNVGLHSMRYLHRFG-AKCITVGES 276 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 58999999999999999988876 899999874
No 222
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=87.85 E-value=0.73 Score=40.81 Aligned_cols=87 Identities=18% Similarity=0.230 Sum_probs=56.0
Q ss_pred cceEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 3 ~~kv~InG~-GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
+.++.|.|. |+.|+.+++.+.+.+ +++++-.+|... +. . +.| ++++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g-~~~v~~VnP~~~-------------------------g~-~--i~G--~~vy-- 59 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYG-TKVVAGVTPGKG-------------------------GS-E--VHG--VPVY-- 59 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTTCT-------------------------TC-E--ETT--EEEE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC-CcEEEEeCCCCC-------------------------Cc-e--ECC--Eeee--
Confidence 368899995 999999999987764 776544335200 00 1 122 2233
Q ss_pred cCCCCCCCcccC-ccEEEecCCCCCCHHhHHHHHhCCCCEEEE
Q 025476 82 RNPEEIPWAETG-AEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (252)
Q Consensus 82 ~dp~~~~w~~~~-vdiV~e~tg~f~~~~~a~~h~~~GakkVii 123 (252)
.+.++++- +.+ +|+++.+++.....+.+...+++|+|.+|+
T Consensus 60 ~sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi 101 (297)
T 2yv2_A 60 DSVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVV 101 (297)
T ss_dssp SSHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 22222221 113 899999999888888888899999986665
No 223
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=87.71 E-value=0.54 Score=39.81 Aligned_cols=31 Identities=26% Similarity=0.490 Sum_probs=25.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|||+|+|+|.+|+.+++.+.+.+ .+ |.+.|.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~-v~~~~~ 34 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HE-LIISGS 34 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CE-EEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-Ce-EEEECC
Confidence 69999999999999999887765 44 456665
No 224
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=87.49 E-value=0.37 Score=41.69 Aligned_cols=30 Identities=20% Similarity=0.393 Sum_probs=24.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
+||+|+|+|.+|..+++.+.+.+ .+++..+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~d 31 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG-FDVTVWN 31 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT-CCEEEEC
T ss_pred CeEEEEccCHHHHHHHHHHHHCC-CeEEEEc
Confidence 49999999999999999988765 6655543
No 225
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=87.46 E-value=0.47 Score=35.67 Aligned_cols=30 Identities=23% Similarity=0.490 Sum_probs=24.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|.|.|.|.+|+.+++.+.+.+ .+++.+.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g-~~v~~~d 36 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMG-HEVLAVD 36 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 47999999999999999998776 5665554
No 226
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=87.31 E-value=0.52 Score=44.05 Aligned_cols=30 Identities=23% Similarity=0.420 Sum_probs=25.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.++||+|+|+||+.+++.+...+ +++++.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G-~~V~~yd 186 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLG-MTVRYYD 186 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999988776 7766654
No 227
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.27 E-value=0.69 Score=46.04 Aligned_cols=30 Identities=20% Similarity=0.327 Sum_probs=24.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.||+|+|.|.+|..++..+...+ ++++..+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG-~~V~l~D 342 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSN-YPVILKE 342 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEEC
T ss_pred cEEEEEcCCHhhHHHHHHHHhCC-CEEEEEE
Confidence 58999999999999999888775 7755543
No 228
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=87.13 E-value=2 Score=37.45 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=26.9
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.++|.|.| .|.||+.+++.+.+.+ .+++++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG-HEVTVVDN 59 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 46899999 7999999999998876 77777753
No 229
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.97 E-value=0.57 Score=43.90 Aligned_cols=37 Identities=16% Similarity=0.377 Sum_probs=28.6
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
+|||+|+|+|.+|..++..+.+.+ .+++.+ |. +.+.+
T Consensus 2 ~mkI~VIG~G~vG~~lA~~La~~G-~~V~~~-D~--~~~~v 38 (450)
T 3gg2_A 2 SLDIAVVGIGYVGLVSATCFAELG-ANVRCI-DT--DRNKI 38 (450)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--CHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhcC-CEEEEE-EC--CHHHH
Confidence 379999999999999999888776 776655 33 44444
No 230
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=86.92 E-value=0.81 Score=40.95 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=24.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 33 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDI 33 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 499999999999999988876663433445554
No 231
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=86.92 E-value=0.64 Score=40.19 Aligned_cols=31 Identities=19% Similarity=0.410 Sum_probs=25.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+||+|+|+|.+|+.+++.+.+.+ .+++.. |.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G-~~V~~~-dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG-CSVTIW-NR 32 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CeEEEE-cC
Confidence 59999999999999999998876 676544 44
No 232
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.89 E-value=0.62 Score=41.27 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=25.9
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|++||+|+|.|.+|..+++.+.+.+ .++..++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G-~~V~~~~ 44 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENG-EEVILWA 44 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCC-CeEEEEe
Confidence 6799999999999999999988776 5655544
No 233
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.85 E-value=0.64 Score=40.66 Aligned_cols=30 Identities=23% Similarity=0.386 Sum_probs=25.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|+|+|+|+||+.+++.+...+ +++++.+
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d 185 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG-AKVKVGA 185 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEEE
Confidence 58999999999999999998776 6766554
No 234
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=86.79 E-value=0.5 Score=43.14 Aligned_cols=30 Identities=27% Similarity=0.332 Sum_probs=24.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCce-EEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVE-LVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~-ivain 34 (252)
.+|||+|+|+||+.+++.+...+ ++ +++.+
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G-~~~V~~~d 195 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFN-PKELLYYD 195 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC-CSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CcEEEEEC
Confidence 58999999999999999987665 65 65554
No 235
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.63 E-value=0.87 Score=36.21 Aligned_cols=34 Identities=26% Similarity=0.282 Sum_probs=28.3
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|+.++|.|.| .|.||+.+++.+.+.+ .+++++..
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r 35 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVR 35 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEe
Confidence 5557999999 6999999999998876 77777653
No 236
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=86.49 E-value=0.51 Score=41.68 Aligned_cols=32 Identities=25% Similarity=0.471 Sum_probs=25.0
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCc-eEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~-~ivaind~ 36 (252)
++||+|+|+|.+|..+++.+.+.+ + +++ +.|.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G-~~~V~-~~dr 56 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG-AIDMA-AYDA 56 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS-CCEEE-EECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CCeEE-EEcC
Confidence 369999999999999999998776 6 544 4444
No 237
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=86.35 E-value=2.1 Score=37.65 Aligned_cols=30 Identities=20% Similarity=0.422 Sum_probs=24.3
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
.+||+|+|.|.+|..++..+.+.+ .+++.+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG-HEVILI 48 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC-CeEEEE
Confidence 479999999999999999887765 565555
No 238
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=86.28 E-value=0.71 Score=39.47 Aligned_cols=31 Identities=35% Similarity=0.542 Sum_probs=25.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|||+|+|+|.+|..+++.+.+.+ .+++.+ |.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~-~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG-HYLIGV-SR 31 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC-CEEEEE-EC
Confidence 48999999999999999988776 675554 44
No 239
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=86.21 E-value=0.72 Score=40.82 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=28.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhhe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY 45 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ay 45 (252)
.|||++|+|.+|..+++++.+.+ +++++-| . +++....
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G-~~v~v~d-r--~~~~~~~ 41 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAG-YLLNVFD-L--VQSAVDG 41 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEEC-S--SHHHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCC-CeEEEEc-C--CHHHHHH
Confidence 39999999999999999998876 7765554 4 4444433
No 240
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.19 E-value=0.73 Score=40.34 Aligned_cols=30 Identities=20% Similarity=0.361 Sum_probs=25.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|+|+|+|+||+.+++.+...+ +++++.+
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d 187 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG-ANVKVGA 187 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCC-CEEEEEE
Confidence 58999999999999999998776 6766554
No 241
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=86.13 E-value=0.58 Score=44.12 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=26.6
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCC-CceEEEEe
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRD-DVELVAVN 34 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~-~~~ivain 34 (252)
|+|||+|+|+|.+|..++..+.+.+ +.+++.++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 4479999999999999999887763 57776664
No 242
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=86.12 E-value=0.81 Score=42.79 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=30.4
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~ 37 (252)
..+|+|-|||-+|+.+++.+.+.+ .++|+|.|..
T Consensus 212 g~~vaVqG~GnVG~~~a~~L~~~G-akvVavsD~~ 245 (421)
T 2yfq_A 212 DAKIAVQGFGNVGTFTVKNIERQG-GKVCAIAEWD 245 (421)
T ss_dssp GSCEEEECCSHHHHHHHHHHHHTT-CCEEECCBCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CEEEEEEecC
Confidence 368999999999999999998876 9999999985
No 243
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=86.11 E-value=0.34 Score=43.39 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=24.7
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
..||+|+|.|.+|..++..+...+ +.-+.+-|.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g-~~~v~l~D~ 40 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKE-LADVVLVDI 40 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CCEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CCeEEEEec
Confidence 359999999999999998887766 522344444
No 244
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=85.82 E-value=0.62 Score=44.25 Aligned_cols=33 Identities=15% Similarity=0.240 Sum_probs=26.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|.+++|||+|+|.+|..+++.+.+.+ ++++..+
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G-~~V~v~d 34 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHG-FVVCAFN 34 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCC-CEEEEEe
Confidence 34579999999999999999998876 7766553
No 245
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=85.60 E-value=0.7 Score=40.85 Aligned_cols=35 Identities=31% Similarity=0.403 Sum_probs=28.7
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
||++||.|.| .|.||+.+++.+.++++.+++++.-
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 57 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDM 57 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEES
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeC
Confidence 4557999999 8999999999998874578877764
No 246
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=85.54 E-value=0.66 Score=43.85 Aligned_cols=33 Identities=33% Similarity=0.462 Sum_probs=26.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|.+++|||+|+|.+|..+++.+.+.+ ++++..|
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~~ 45 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRG-YTVSIFN 45 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTT-CCEEEEC
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCC-CeEEEEe
Confidence 56789999999999999999998775 7765554
No 247
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=85.47 E-value=0.66 Score=43.45 Aligned_cols=34 Identities=26% Similarity=0.282 Sum_probs=26.7
Q ss_pred CC-cceEEEEcCChhHHHHHHHHHcCC-CceEEEEe
Q 025476 1 MG-KVKIGINGFGRIGRLVARVILQRD-DVELVAVN 34 (252)
Q Consensus 1 m~-~~kv~InG~GrIGr~v~r~~~~~~-~~~ivain 34 (252)
|+ +|||+|+|+|.+|..++..+.+.+ +.+++.++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d 37 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVD 37 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 54 379999999999999999887763 47766653
No 248
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=85.25 E-value=0.76 Score=38.93 Aligned_cols=31 Identities=29% Similarity=0.577 Sum_probs=25.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|||+|+|+|.+|..+++.+.+.+ ++++. .|.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g-~~V~~-~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG-VEVVT-SLE 31 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEE-CCT
T ss_pred CeEEEEechHHHHHHHHHHHHCC-CeEEE-eCC
Confidence 38999999999999999998765 67655 454
No 249
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=85.21 E-value=0.87 Score=43.00 Aligned_cols=100 Identities=15% Similarity=0.341 Sum_probs=61.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC--------CChhhhheeeeee-cccccCCCcceEEcCCeeeEECCe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKYD-SVHGQWKHHELKVKDDKTLLFGEK 74 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~--------~~~~~~ayll~yd-S~~G~~~~~~v~~~~~~~l~i~G~ 74 (252)
.+|+|-|||.+|...++.+.+.+ .++|++.|.. +|.+.+..+++.- +..|+.. ..... .+.+
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~G-akvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~----~~~~~----~g~~ 306 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEFG-ARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVA----DYAKE----FGLV 306 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHH----HHHHH----HTCE
T ss_pred CEEEEeCCChHHHHHHHHHHhcC-CeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccc----ccccc----CCcE
Confidence 68999999999999999998876 8999998753 2444554444211 1111100 00000 0111
Q ss_pred eEEEEeecCCCCCCCcccCccEEEecC-CCCCCHHhHHHHHhCCCCE
Q 025476 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKK 120 (252)
Q Consensus 75 ~i~v~~~~dp~~~~w~~~~vdiV~e~t-g~f~~~~~a~~h~~~Gakk 120 (252)
.+ ++++ .|. ..+|+.+=|+ +.-++.+.++.-.+.|||-
T Consensus 307 --~~----~~~~-i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~ 345 (450)
T 4fcc_A 307 --YL----EGQQ-PWS-VPVDIALPCATQNELDVDAAHQLIANGVKA 345 (450)
T ss_dssp --EE----ETCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCE
T ss_pred --Ee----cCcc-ccc-CCccEEeeccccccccHHHHHHHHhcCceE
Confidence 11 1222 264 6899999884 5667888888888888864
No 250
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.11 E-value=0.97 Score=40.01 Aligned_cols=34 Identities=26% Similarity=0.325 Sum_probs=26.9
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|| +||+|+|.|.+|..++..+...+.++ +.+-|.
T Consensus 1 M~-~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di 34 (309)
T 1ur5_A 1 MR-KKISIIGAGFVGSTTAHWLAAKELGD-IVLLDI 34 (309)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHTTCSE-EEEECS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeC
Confidence 55 79999999999999988887776457 666665
No 251
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=85.07 E-value=0.89 Score=43.45 Aligned_cols=32 Identities=44% Similarity=0.741 Sum_probs=26.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~ 37 (252)
.+|||+|+|+||+.+++.+...+ +++++. |+.
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G-~~V~~~-d~~ 174 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFG-AYVVAY-DPY 174 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEE-CTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEE-CCC
Confidence 68999999999999999998765 777665 453
No 252
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=84.91 E-value=1 Score=36.65 Aligned_cols=30 Identities=20% Similarity=0.354 Sum_probs=25.0
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|||+|.| .|.+|+.+++.+.+.+ .+++.++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~ 31 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGS 31 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 4899999 9999999999988775 6766654
No 253
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=84.87 E-value=0.84 Score=39.91 Aligned_cols=29 Identities=31% Similarity=0.515 Sum_probs=23.8
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEE
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivai 33 (252)
.||+|+| +|.||..+++.+.+.+ .+++.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~ 51 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASG-YPISIL 51 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC-CeEEEE
Confidence 5899999 9999999999987765 555444
No 254
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=84.86 E-value=0.73 Score=41.44 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=25.6
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEec
Confidence 3799999999999999998877664433444454
No 255
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=84.84 E-value=0.74 Score=39.65 Aligned_cols=29 Identities=21% Similarity=0.545 Sum_probs=24.0
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
|||+|+|+|.+|+.+++.+.+.+ ++++..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g-~~V~~~ 29 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG-YPLIIY 29 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT-CCEEEE
T ss_pred CeEEEEeccHHHHHHHHHHHHCC-CEEEEE
Confidence 38999999999999999988765 665544
No 256
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=84.84 E-value=0.96 Score=37.45 Aligned_cols=27 Identities=22% Similarity=0.340 Sum_probs=22.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEE
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELV 31 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~iv 31 (252)
+||+|+|+|.+|..+++.+.+.+ .+++
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g-~~V~ 46 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAG-HEVT 46 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEE
Confidence 69999999999999999887765 5543
No 257
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=84.48 E-value=2.8 Score=39.09 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=29.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~ 37 (252)
.+|+|-|||-+|..+++.+.+.+ .++|+|.|..
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~G-akVVavsD~~ 243 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKMG-AKVIAVSDIN 243 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 68999999999999999888775 9999999973
No 258
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=84.83 E-value=0.19 Score=41.83 Aligned_cols=30 Identities=23% Similarity=0.266 Sum_probs=23.7
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEE
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVA 32 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~iva 32 (252)
+.+||+|+|+|.+|+.+++.+.+.+ .+++.
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G-~~V~~ 47 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCG-YSVVF 47 (201)
Confidence 4579999999999999999887665 45433
No 259
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=84.28 E-value=1.8 Score=39.13 Aligned_cols=33 Identities=30% Similarity=0.313 Sum_probs=25.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di 54 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDV 54 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 699999999999999888877664444455555
No 260
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=84.21 E-value=0.43 Score=41.10 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=27.9
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.|||+|+|.|.+|..+.+++.+.+ .+++.++.+
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G-~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVG-HYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTT-CEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCC-CEEEEecCH
Confidence 479999999999999999998776 787777653
No 261
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=83.91 E-value=1.1 Score=38.45 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=27.3
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|| +||.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (311)
T 3m2p_A 1 MS-LKIAVTGGTGFLGQYVVESIKNDG-NTPIILTR 34 (311)
T ss_dssp -C-CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 55 7999999 8999999999998886 67777654
No 262
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=83.73 E-value=1.1 Score=38.09 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=24.9
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|||+|+|.|.+|..+++.+.+.+ .+++.++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 30 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG-HEVQGWL 30 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhCC-CCEEEEE
Confidence 48999999999999999988776 6766554
No 263
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=83.47 E-value=1.1 Score=39.43 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=25.4
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+|||+|+|.|.+|..++..+.+.+ .+++.+..
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTG-HCVSVVSR 33 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC-CeEEEEeC
Confidence 389999999999999998887765 56655543
No 264
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=83.37 E-value=1 Score=40.94 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=24.9
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|| |||+|+|.|.+|..++..+....+.+++.++
T Consensus 1 ~~-mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 1 MT-VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp -C-EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CC-ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 44 7999999999999998887654346765554
No 265
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=82.98 E-value=1.8 Score=40.45 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=29.6
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
..+|+|-|||-+|+..++.+.+.+ .++|+|.|.
T Consensus 218 gk~vaVqG~GnVG~~~a~~L~~~G-akVVavsD~ 250 (419)
T 3aoe_E 218 GARVVVQGLGQVGAAVALHAERLG-MRVVAVATS 250 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEEEET
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 368999999999999999998875 999999987
No 266
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=82.83 E-value=1.6 Score=33.15 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=29.8
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
..++.|+|.|..|+.+++.+.+.++++++++-|.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 3589999999999999999987767999998875
No 267
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=82.68 E-value=0.54 Score=36.27 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=25.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.||+|+|.|.+|+.+++.+.+.+ ++ +.+.|.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g-~~-v~v~~r 52 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQ-YK-VTVAGR 52 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTT-CE-EEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CE-EEEEcC
Confidence 58999999999999999887654 78 666665
No 268
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=82.30 E-value=2.8 Score=36.99 Aligned_cols=128 Identities=12% Similarity=0.222 Sum_probs=68.7
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecCC
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNP 84 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~dp 84 (252)
+|.|+|.|.+|...++.+...+ .+++++... .+.+.++.+ +|. + .+ + .++
T Consensus 179 ~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~---~~~~~~~~~----lGa----------~-~v---------~--~~~ 228 (348)
T 3two_A 179 KVGVAGFGGLGSMAVKYAVAMG-AEVSVFARN---EHKKQDALS----MGV----------K-HF---------Y--TDP 228 (348)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT-CEEEEECSS---STTHHHHHH----TTC----------S-EE---------E--SSG
T ss_pred EEEEECCcHHHHHHHHHHHHCC-CeEEEEeCC---HHHHHHHHh----cCC----------C-ee---------c--CCH
Confidence 7899999999999999887776 687776532 222222211 120 1 11 1 122
Q ss_pred CCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCC-CCCCeEEeecCcccc-CCCCCeEEcCCchhhhHHHH
Q 025476 85 EEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAPMFVVGVNENEY-KPELNIVSNASCTTNCLAPL 162 (252)
Q Consensus 85 ~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps-~d~p~vV~gVN~~~~-~~~~~IIS~asCtT~~Lap~ 162 (252)
+.+ . .++|+||||+|.....+.+-..++.|-+=+++..++ .+.+.+-+ .+.+ .++..+...-..+...+.-+
T Consensus 229 ~~~--~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~ 302 (348)
T 3two_A 229 KQC--K-EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSV---FDFIHLGNRKVYGSLIGGIKETQEM 302 (348)
T ss_dssp GGC--C-SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEH---HHHHHTCSCEEEECCSCCHHHHHHH
T ss_pred HHH--h-cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCH---HHHHhhCCeEEEEEecCCHHHHHHH
Confidence 222 2 289999999998766676666666555323332222 22221110 1111 22444555444444555566
Q ss_pred HHHHHh
Q 025476 163 AKVIHD 168 (252)
Q Consensus 163 lk~L~~ 168 (252)
++.+.+
T Consensus 303 ~~l~~~ 308 (348)
T 3two_A 303 VDFSIK 308 (348)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666554
No 269
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=82.06 E-value=1.1 Score=41.39 Aligned_cols=36 Identities=31% Similarity=0.719 Sum_probs=29.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
++|.|.|+|++|+.+++.|.+.+ .++++|.. +++.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g-~~vvvId~---d~~~v 40 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG-VKMVVLDH---DPDHI 40 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCEEEEEC---CHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC-CCEEEEEC---CHHHH
Confidence 68999999999999999998876 78777753 45544
No 270
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=82.00 E-value=0.72 Score=40.85 Aligned_cols=26 Identities=27% Similarity=0.417 Sum_probs=21.3
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~ 26 (252)
|+++||+|+|.|.+|..++..+.+.+
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~g 31 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGNA 31 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcC
Confidence 55679999999999999998886553
No 271
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=81.38 E-value=1.4 Score=42.09 Aligned_cols=31 Identities=13% Similarity=0.224 Sum_probs=25.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+|+|+|+|+||+.+++.+...+ +++++. |+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G-~~V~v~-d~ 308 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLG-ATVWVT-EI 308 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEE-CS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 58999999999999999998776 775554 44
No 272
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=81.36 E-value=4.2 Score=34.51 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=24.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|-|+|.|.+|..-++.+.+.+ .+++.|+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G-A~VtVva 61 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG-AAITVVA 61 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC-CCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998776 5655554
No 273
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=81.04 E-value=1.2 Score=39.03 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=24.2
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|+ +||+|+|.|.+|..++..+.+.+ .+++.+..
T Consensus 1 M~-mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (312)
T 3hn2_A 1 MS-LRIAIVGAGALGLYYGALLQRSG-EDVHFLLR 33 (312)
T ss_dssp ----CEEEECCSTTHHHHHHHHHHTS-CCEEEECS
T ss_pred CC-CEEEEECcCHHHHHHHHHHHHCC-CeEEEEEc
Confidence 44 89999999999999998887765 56555543
No 274
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=81.00 E-value=1.4 Score=38.14 Aligned_cols=35 Identities=31% Similarity=0.578 Sum_probs=27.6
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCC-CceEEEEeC
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~-~~~ivaind 35 (252)
|+.|||.|-| .|.||+.+++.+.+++ +.+++++..
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 6668999999 8999999999998775 477777653
No 275
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=80.99 E-value=1.3 Score=37.33 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=23.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|||+|+|.|.+|..+++.+.+.+..++ .+.|.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v-~~~~r 32 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRI-YIANR 32 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEE-EEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeE-EEECC
Confidence 489999999999999998876542343 44454
No 276
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=80.94 E-value=1.4 Score=39.84 Aligned_cols=30 Identities=23% Similarity=0.313 Sum_probs=25.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.||+|+|+|.||..+++.+.+.+ .++++.+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G-~~V~~~d 38 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAAN-HSVFGYN 38 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CEEEEEe
Confidence 69999999999999999998776 6665543
No 277
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=80.92 E-value=1.4 Score=37.90 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=26.6
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivain 34 (252)
||.+||.|.| .|.||+.+++.+.+.+ .+++++.
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~~ 34 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQRG-DVELVLR 34 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEe
Confidence 6778999999 8999999999998776 6665553
No 278
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=80.88 E-value=1.4 Score=39.48 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=24.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
+||+|+|+|.+|..+++.+...+ ++++..+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G-~~V~~~~ 46 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG-VDVTVGL 46 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCc-CEEEEEE
Confidence 68999999999999999988776 6655443
No 279
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=80.17 E-value=0.91 Score=39.49 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=22.7
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
|+ |||+|+|.|.+|..+...+.+.+ .++..+
T Consensus 1 M~-mkI~iiGaGa~G~~~a~~L~~~g-~~V~~~ 31 (294)
T 3g17_A 1 MS-LSVAIIGPGAVGTTIAYELQQSL-PHTTLI 31 (294)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHHC-TTCEEE
T ss_pred CC-cEEEEECCCHHHHHHHHHHHHCC-CeEEEE
Confidence 44 89999999999999988887655 344434
No 280
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=79.59 E-value=3.4 Score=36.54 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=49.7
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCc-eEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecC
Q 025476 5 KIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~-~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~d 83 (252)
+|.|.|.|.+|...++.+...+ . +++++.. +.+.+.++-+ +|- .-.++-+.-.+. +.
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~---~~~~~~~~~~----lGa------------~~vi~~~~~~~~--~~ 226 (352)
T 3fpc_A 169 TVCVIGIGPVGLMSVAGANHLG-AGRIFAVGS---RKHCCDIALE----YGA------------TDIINYKNGDIV--EQ 226 (352)
T ss_dssp CEEEECCSHHHHHHHHHHHTTT-CSSEEEECC---CHHHHHHHHH----HTC------------CEEECGGGSCHH--HH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CcEEEEECC---CHHHHHHHHH----hCC------------ceEEcCCCcCHH--HH
Confidence 6889999999999999887666 5 6666543 2332222211 121 011110000000 00
Q ss_pred CCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCC
Q 025476 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAK 119 (252)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~Gak 119 (252)
..++ .+..++|+||||+|.-...+.+-..++.|-+
T Consensus 227 v~~~-t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~ 261 (352)
T 3fpc_A 227 ILKA-TDGKGVDKVVIAGGDVHTFAQAVKMIKPGSD 261 (352)
T ss_dssp HHHH-TTTCCEEEEEECSSCTTHHHHHHHHEEEEEE
T ss_pred HHHH-cCCCCCCEEEECCCChHHHHHHHHHHhcCCE
Confidence 0000 0113799999999986556667777776653
No 281
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=79.49 E-value=1.6 Score=38.18 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=26.7
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|++++|.|.| .|.||+.+++.+.+.+ .+++++..
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R 42 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILAR 42 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEEC
Confidence 3346999999 6999999999998886 77777754
No 282
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=79.22 E-value=1.9 Score=39.32 Aligned_cols=31 Identities=23% Similarity=0.497 Sum_probs=27.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+|+|.|||.||+.+++.+.+.+ .+++ +.|+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~G-akVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAG-AQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 58999999999999999998886 7888 8887
No 283
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=79.12 E-value=2.2 Score=37.04 Aligned_cols=29 Identities=24% Similarity=0.283 Sum_probs=24.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
.||+|+|.|.+|..++..+...+ ++++.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G-~~V~~~ 44 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATG-HTVVLV 44 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEE
Confidence 58999999999999999887775 676544
No 284
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=79.11 E-value=2.2 Score=34.44 Aligned_cols=31 Identities=32% Similarity=0.453 Sum_probs=26.4
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|||.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG-HEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEe
Confidence 4899999 7999999999998886 78777754
No 285
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=79.02 E-value=1.4 Score=41.86 Aligned_cols=30 Identities=17% Similarity=0.268 Sum_probs=24.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|+|+|+|+||+.+++.+...+ +++++.+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G-~~Viv~d 287 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLG-ARVYITE 287 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCc-CEEEEEe
Confidence 58999999999999999987665 7765543
No 286
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=78.99 E-value=2.5 Score=42.18 Aligned_cols=145 Identities=17% Similarity=0.288 Sum_probs=75.9
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhhe-------eeeeecccccCCCcceEEcCCeeeEECCeeE
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY-------MFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ay-------ll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i 76 (252)
-||||+|.|.+|..++..+...+ ++++ +-|+ +.+.+.. .++.....++.. . .. .. ...+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG-~~V~-l~D~--~~~~l~~~~~~i~~~l~~~~~~~~~~-~-----~~-~~---~~~~ 382 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVG-ISVV-AVES--DPKQLDAAKKIITFTLEKEASRAHQN-G-----QA-SA---KPKL 382 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEE-EECS--SHHHHHHHHHHHHHHHHHHHHHHHTT-T-----CC-CC---CCCE
T ss_pred cEEEEEcccHHHHHHHHHHHhCC-Cchh-cccc--hHhhhhhHHHHHHHHHHHHHHhcccc-c-----hh-hh---hhhh
Confidence 49999999999999998777665 7754 4454 3443222 111111111111 0 00 00 0123
Q ss_pred EEEeecCCCCCCCcccCccEEEecCCCCCCHH-----hHHHHHhCCCCEEEEcCCCC----------CCCeEEee---cC
Q 025476 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKD-----KAAAHLKGGAKKVIISAPSK----------DAPMFVVG---VN 138 (252)
Q Consensus 77 ~v~~~~dp~~~~w~~~~vdiV~e~tg~f~~~~-----~a~~h~~~GakkViis~ps~----------d~p~vV~g---VN 138 (252)
.. ..+.+.+ .++|+|+||.-.-.... ....+.+.++ ++-|+.|. +.|-=+.| .|
T Consensus 383 ~~--~~~~~~l----~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~p~r~ig~HFfn 454 (742)
T 3zwc_A 383 RF--SSSTKEL----STVDLVVEAVFEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDRPQLVIGTHFFS 454 (742)
T ss_dssp EE--ESCGGGG----GSCSEEEECCCSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSCGGGEEEEECCS
T ss_pred cc--cCcHHHH----hhCCEEEEeccccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCCccccccccccC
Confidence 33 2344443 38999999977544432 3356666777 77788762 23422333 23
Q ss_pred ccccCCCCCeEEcCCchhhhHHHHHHHHHhhcC
Q 025476 139 ENEYKPELNIVSNASCTTNCLAPLAKVIHDKFG 171 (252)
Q Consensus 139 ~~~~~~~~~IIS~asCtT~~Lap~lk~L~~~fg 171 (252)
+-.+-+--.||..+..+-..+.-+..... ..|
T Consensus 455 P~~~m~LVEvi~g~~Ts~e~~~~~~~~~~-~lg 486 (742)
T 3zwc_A 455 PAHVMRLLEVIPSRYSSPTTIATVMSLSK-KIG 486 (742)
T ss_dssp STTTCCEEEEEECSSCCHHHHHHHHHHHH-HTT
T ss_pred CCCCCceEEEecCCCCCHHHHHHHHHHHH-HhC
Confidence 32222113467766666666666655443 344
No 287
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=78.83 E-value=1.4 Score=41.37 Aligned_cols=37 Identities=24% Similarity=0.420 Sum_probs=29.2
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
.|||-|.|+|++|+.+++.|.+.+ .+++.|.. +.+.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~-~~v~vId~---d~~~~ 39 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGEN-NDITIVDK---DGDRL 39 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTT-EEEEEEES---CHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC-CCEEEEEC---CHHHH
Confidence 379999999999999999987665 77777753 45554
No 288
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=78.58 E-value=1.6 Score=37.97 Aligned_cols=30 Identities=17% Similarity=0.282 Sum_probs=24.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|||+|+|.|.+|..+++.+.+.+ .+++.++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g-~~V~~~~ 30 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG-NEVRIWG 30 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CeEEEEE
Confidence 48999999999999999887665 5665554
No 289
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=78.50 E-value=2.2 Score=36.39 Aligned_cols=30 Identities=23% Similarity=0.447 Sum_probs=26.1
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|||.|-| .|.||+.+++.|.+++ .+++++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLVS 31 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEE
Confidence 5899999 7999999999999886 7777774
No 290
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=78.43 E-value=1.9 Score=40.76 Aligned_cols=29 Identities=14% Similarity=0.260 Sum_probs=24.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
.+|+|+|+|+||+.+++.+...+ +++++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG-a~Viv~ 276 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG-ARVKVT 276 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEE
Confidence 48999999999999999998776 675544
No 291
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=78.28 E-value=2 Score=40.41 Aligned_cols=31 Identities=16% Similarity=0.308 Sum_probs=25.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+|+|+|+|+||+.+++.+...+ ++++. .|+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~G-a~Viv-~D~ 242 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFG-ARVVV-TEV 242 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEE-ECC
Confidence 68999999999999999998776 67544 555
No 292
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=78.10 E-value=6.5 Score=34.67 Aligned_cols=90 Identities=19% Similarity=0.081 Sum_probs=53.8
Q ss_pred ceEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 4 VKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 4 ~kv~InG~GrIGr~-v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
.||.++|.|.+|.. +++.+.+++ .++. +.|....+.....| +. .| +.+....
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G-~~V~-~~D~~~~~~~~~~L-----------------~~------~g--i~v~~g~ 57 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG-FEVS-GCDAKMYPPMSTQL-----------------EA------LG--IDVYEGF 57 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT-CEEE-EEESSCCTTHHHHH-----------------HH------TT--CEEEESC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC-CEEE-EEcCCCCcHHHHHH-----------------Hh------CC--CEEECCC
Confidence 48999999999995 788887877 6644 44542111111111 00 11 1222234
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEc
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis 124 (252)
+++++.+ .++|+|+=+.|.-.+......+.+.|.+ |++
T Consensus 58 ~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi~--v~~ 95 (326)
T 3eag_A 58 DAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGLP--YIS 95 (326)
T ss_dssp CGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTCC--EEE
T ss_pred CHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCCc--EEe
Confidence 5555431 2689999999987666666677778873 454
No 293
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=77.96 E-value=1.7 Score=39.01 Aligned_cols=30 Identities=20% Similarity=0.467 Sum_probs=24.8
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+|.|.|.|.||...++.+...+ .+++++..
T Consensus 190 ~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~ 219 (366)
T 1yqd_A 190 HIGIVGLGGLGHVAVKFAKAFG-SKVTVIST 219 (366)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 6899999999999999887776 67776653
No 294
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=77.94 E-value=2.1 Score=38.67 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=24.1
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
.+||+|+|.|.+|..++..+.+.+ .++...
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G-~~V~l~ 58 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG-QKVRLW 58 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCC-CeEEEE
Confidence 479999999999999999888765 554433
No 295
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=77.90 E-value=1.8 Score=37.34 Aligned_cols=31 Identities=23% Similarity=0.474 Sum_probs=24.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCC----C-ceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRD----D-VELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~----~-~~ivain 34 (252)
|||+|+|.|.+|..++..+.+.+ + .+++.++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 69999999999999998887651 3 5665554
No 296
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=77.89 E-value=1.5 Score=37.09 Aligned_cols=33 Identities=15% Similarity=0.354 Sum_probs=27.1
Q ss_pred CcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 2 ~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|+|||.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 37 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEE-YDIYPFDK 37 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTT-EEEEEECT
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCC-CEEEEecc
Confidence 447999999 7999999999988775 78777754
No 297
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=77.50 E-value=1.8 Score=40.70 Aligned_cols=30 Identities=23% Similarity=0.509 Sum_probs=24.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|||||+|+|.+|..+++.+.+.+ ++++..+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G-~~V~v~d 31 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG-FKVAVFN 31 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CEEEEEe
Confidence 58999999999999999998776 6655443
No 298
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=77.35 E-value=1.9 Score=40.87 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=26.7
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|..+|||+|+|.+|..+++++.+.+ ++++..|
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~d 40 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHG-FTVCAYN 40 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCC-CEEEEEe
Confidence 4579999999999999999998876 7765554
No 299
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=77.28 E-value=2.2 Score=38.08 Aligned_cols=39 Identities=21% Similarity=0.135 Sum_probs=29.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhhee
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayl 46 (252)
.||+|+|.|.+|..++..+...+ ++++. .|+ +++.+..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G-~~V~l-~d~--~~~~~~~~ 45 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG-FRVKL-YDI--EPRQITGA 45 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEE-ECS--CHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC-CEEEE-EeC--CHHHHHHH
Confidence 58999999999999999888776 67544 455 55554443
No 300
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=77.11 E-value=3.3 Score=33.81 Aligned_cols=35 Identities=14% Similarity=0.224 Sum_probs=28.4
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCC-CceEEEEeC
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~-~~~ivaind 35 (252)
|+.++|.|.| .|.||+.+++.+.+.+ +.+++++..
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 3457899999 8999999999998884 578777653
No 301
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=77.09 E-value=1.9 Score=40.46 Aligned_cols=30 Identities=17% Similarity=0.266 Sum_probs=24.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
+||+|+|+|.+|..+++.+.+.+ ++++..+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G-~~V~v~d 32 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG-FVVCAFN 32 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CeEEEEChHHHHHHHHHHHHHCC-CeEEEEe
Confidence 68999999999999999998776 6754443
No 302
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=76.95 E-value=2.2 Score=37.08 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=27.9
Q ss_pred CcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 2 ~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+.++|.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 57 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDN 57 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 357999999 7999999999998886 77777754
No 303
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=76.54 E-value=2.3 Score=39.26 Aligned_cols=36 Identities=28% Similarity=0.531 Sum_probs=27.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
|||+|+|+|.+|..++..+.+.+ .+++.+ |. +.+.+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G-~~V~~~-d~--~~~~~ 36 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG-HEVIGV-DV--SSTKI 36 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEE-CS--CHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE-EC--CHHHH
Confidence 48999999999999999888776 676555 43 44444
No 304
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=76.22 E-value=2.4 Score=33.91 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=26.2
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCc-eEEEEe
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDV-ELVAVN 34 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~-~ivain 34 (252)
.++|.|.| .|.||+.+++.+.+++.+ +++++.
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~ 38 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 38 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEe
Confidence 46999999 899999999999988743 666554
No 305
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=75.85 E-value=3.6 Score=36.62 Aligned_cols=34 Identities=35% Similarity=0.380 Sum_probs=26.8
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|.+||+|+|.|.+|..++..+...+.++ |.+-|.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di 46 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDI 46 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 3479999999999999888877766337 666665
No 306
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=75.84 E-value=2.7 Score=35.80 Aligned_cols=32 Identities=34% Similarity=0.511 Sum_probs=27.2
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+++|.|-| .|.||+.+++.+.+++ .+++++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 39 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASG-EEVTVLDD 39 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 47999999 7999999999998886 67777754
No 307
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=75.66 E-value=3.4 Score=37.34 Aligned_cols=108 Identities=19% Similarity=0.161 Sum_probs=53.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC-CCChhhhheeeee-ecccccCCCcceEEcCCeee-EEC-CeeEEEE
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP-FITTDYMTYMFKY-DSVHGQWKHHELKVKDDKTL-LFG-EKPVTVF 79 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~-~~~~~~~ayll~y-dS~~G~~~~~~v~~~~~~~l-~i~-G~~i~v~ 79 (252)
-||.|+|.|.+|..++.++...+ +.-+.+-|. ..++..+..-+-| +..-|+.+ .+ +..+ .| .+| +-.+...
T Consensus 119 ~~VlvvG~GglGs~va~~La~aG-vg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~K-a~--~~~~-~l~~~np~v~v~~~ 193 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSG-IGEIILIDNDQIENTNLTRQVLFSEDDVGKNK-TE--VIKR-ELLKRNSEISVSEI 193 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEECCBCCGGGGGTCTTCCGGGTTSBH-HH--HHHH-HHHHHCTTSEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCC-CCeEEEECCCcCcccccccccCCChHHCCChH-HH--HHHH-HHHHHCCCCeEEEe
Confidence 58999999999999999987665 433334333 2334443332211 11123322 11 0000 00 112 1223332
Q ss_pred eec-CCCC-CC-CcccCccEEEecCCCCC-CHHhH-HHHHhCCC
Q 025476 80 GVR-NPEE-IP-WAETGAEYVVESTGVFT-DKDKA-AAHLKGGA 118 (252)
Q Consensus 80 ~~~-dp~~-~~-w~~~~vdiV~e~tg~f~-~~~~a-~~h~~~Ga 118 (252)
.+. +..+ ++ |. +.|+|++|+..+. ++... ....+.|.
T Consensus 194 ~~~i~~~~~~~~~~--~~DlVvd~~Dn~~~~r~~ln~~c~~~~~ 235 (353)
T 3h5n_A 194 ALNINDYTDLHKVP--EADIWVVSADHPFNLINWVNKYCVRANQ 235 (353)
T ss_dssp ECCCCSGGGGGGSC--CCSEEEECCCCSTTHHHHHHHHHHHTTC
T ss_pred ecccCchhhhhHhc--cCCEEEEecCChHHHHHHHHHHHHHhCC
Confidence 211 1111 11 33 7899999999887 55433 34555665
No 308
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=75.51 E-value=3.2 Score=37.86 Aligned_cols=35 Identities=17% Similarity=0.444 Sum_probs=29.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhh
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDY 42 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~ 42 (252)
.+|+|.|+|.+|+.+++.+.+.+ .+++ +.|+ +++.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~G-akVv-v~D~--~~~~ 208 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEG-AKLV-VTDV--NKAA 208 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS--CHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEE-EEcC--CHHH
Confidence 58999999999999999998887 7877 7776 4443
No 309
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=75.36 E-value=2.5 Score=35.91 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=26.5
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+++|.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 36 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVR 36 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEEC
Confidence 46899999 7999999999998886 67666543
No 310
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=75.32 E-value=0.58 Score=41.58 Aligned_cols=32 Identities=19% Similarity=0.400 Sum_probs=24.0
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.-||.|+|.|-+|..++..+...+ +.-+.|-|
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aG-VG~i~lvD 67 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCG-IGKLLLFD 67 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 358999999999999999887655 43334444
No 311
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=75.15 E-value=1.2 Score=39.39 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=22.1
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
||+|+|.|.+|..++..+...+ +.-+.+-|.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~-l~el~L~Di 31 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRG-YDDLLLIAR 31 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT-CSCEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHhCC-CCEEEEEcC
Confidence 7999999999998887765544 332344454
No 312
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=75.00 E-value=4 Score=33.10 Aligned_cols=31 Identities=23% Similarity=0.368 Sum_probs=25.2
Q ss_pred ce-EEEEc-CChhHHHHHHHHH-cCCCceEEEEeC
Q 025476 4 VK-IGING-FGRIGRLVARVIL-QRDDVELVAVND 35 (252)
Q Consensus 4 ~k-v~InG-~GrIGr~v~r~~~-~~~~~~ivaind 35 (252)
+| |.|.| .|.||+.+++.+. +.+ .+++++..
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g-~~V~~~~r 38 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTD-MHITLYGR 38 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCC-CEEEEEES
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCC-ceEEEEec
Confidence 45 99999 7999999999998 555 78777654
No 313
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=74.75 E-value=3.8 Score=37.28 Aligned_cols=33 Identities=18% Similarity=0.445 Sum_probs=28.5
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
..||+|.|-|..|+.+++++.+.+ ++++++.++
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG-~~v~~~d~~ 56 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLN-IQVNVLDAD 56 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT-CEEEEEEST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 579999999999999999998776 888888743
No 314
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=74.74 E-value=3.4 Score=37.12 Aligned_cols=30 Identities=27% Similarity=0.477 Sum_probs=26.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|+|.|.|.+|+.+++++.+.+ +++++++
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G-~~vi~~d 44 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMG-YKIAVLD 44 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 48999999999999999998776 8888885
No 315
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=74.50 E-value=3.1 Score=32.70 Aligned_cols=32 Identities=22% Similarity=0.217 Sum_probs=26.0
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|...|+|+|.|..|-..+..|...+ ++++.+.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G-~~V~v~E 32 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAG-HQVHLFD 32 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEE
Confidence 4489999999999999998887776 7766664
No 316
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=74.15 E-value=7 Score=34.29 Aligned_cols=129 Identities=15% Similarity=0.111 Sum_probs=67.8
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecCC
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNP 84 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~dp 84 (252)
+|.|+|.|.+|...++.+...+..+++++.. +.+.+..+-+ +|- + . .++ .++
T Consensus 174 ~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~---~~~~~~~~~~----lGa----------~-~-~i~--------~~~- 225 (345)
T 3jv7_A 174 TAVVIGVGGLGHVGIQILRAVSAARVIAVDL---DDDRLALARE----VGA----------D-A-AVK--------SGA- 225 (345)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCCEEEEEES---CHHHHHHHHH----TTC----------S-E-EEE--------CST-
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHH----cCC----------C-E-EEc--------CCC-
Confidence 6889999999999988886665577777743 2333322221 120 0 1 111 000
Q ss_pred CCCCC--------cccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCCCCeEEeecCccccCCCCCeEEcCCchh
Q 025476 85 EEIPW--------AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTT 156 (252)
Q Consensus 85 ~~~~w--------~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~vV~gVN~~~~~~~~~IIS~asCtT 156 (252)
+| +..++|+||||+|.-.+.+.+-..++.|-+ +++-+.....+.- ++...+..+..+...-.-+-
T Consensus 226 ---~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~-iv~~G~~~~~~~~---~~~~~~~~~~~i~g~~~~~~ 298 (345)
T 3jv7_A 226 ---GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGH-ISVVGIHAGAHAK---VGFFMIPFGASVVTPYWGTR 298 (345)
T ss_dssp ---THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEE-EEECSCCTTCCEE---ESTTTSCTTCEEECCCSCCH
T ss_pred ---cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCE-EEEECCCCCCCCC---cCHHHHhCCCEEEEEecCCH
Confidence 12 113899999999976455666667766543 3333332221221 22233333344444433334
Q ss_pred hhHHHHHHHHHh
Q 025476 157 NCLAPLAKVIHD 168 (252)
Q Consensus 157 ~~Lap~lk~L~~ 168 (252)
..+.-+++.+.+
T Consensus 299 ~~~~~~~~l~~~ 310 (345)
T 3jv7_A 299 SELMEVVALARA 310 (345)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 555566666554
No 317
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=74.12 E-value=2.9 Score=35.94 Aligned_cols=31 Identities=29% Similarity=0.301 Sum_probs=26.2
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
++|.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFS-HPTFIYAR 36 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred cEEEEEcCCchhHHHHHHHHHhCC-CcEEEEEC
Confidence 6899999 7999999999998876 67766653
No 318
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=74.07 E-value=3 Score=39.16 Aligned_cols=31 Identities=10% Similarity=0.262 Sum_probs=25.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+|+|.|+|.||+.+++.+...+ +++++ .|.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~G-a~Viv-~D~ 251 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMG-SIVYV-TEI 251 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEE-EeC
Confidence 58999999999999999998776 67544 444
No 319
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=74.05 E-value=3.6 Score=36.97 Aligned_cols=30 Identities=27% Similarity=0.532 Sum_probs=26.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|+|.|.|.+|+.+++++.+.+ +++++++
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG-~~viv~d 42 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMG-YKVVVLD 42 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEE
Confidence 58999999999999999998886 8888774
No 320
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=74.05 E-value=3.4 Score=36.60 Aligned_cols=86 Identities=21% Similarity=0.174 Sum_probs=52.4
Q ss_pred ceEEEE-cC-ChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEee
Q 025476 4 VKIGIN-GF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (252)
Q Consensus 4 ~kv~In-G~-GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~ 81 (252)
-.++|+ |+ |+.|+.+++.+.+.+ ++++.-.+|... + . . +.| ++++
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G-~~~v~~VnP~~~-------------------g------~-~--i~G--~~vy-- 60 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYG-TNLVGGTTPGKG-------------------G------K-T--HLG--LPVF-- 60 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTTCT-------------------T------C-E--ETT--EEEE--
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCC-CcEEEEeCCCcC-------------------c------c-e--ECC--eeee--
Confidence 357888 96 999999999887765 776644445200 0 0 1 223 2232
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEE
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkVii 123 (252)
.+.++++ .+..+|+++-+++.....+.+...++.|+|.+++
T Consensus 61 ~sl~el~-~~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 61 NTVKEAK-EQTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp SSHHHHH-HHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred chHHHhh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 1222222 1125788888888776667777778888887544
No 321
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=73.33 E-value=3.3 Score=35.61 Aligned_cols=31 Identities=26% Similarity=0.207 Sum_probs=26.0
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.+|.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 43 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTR 43 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHCC-CcEEEEEC
Confidence 3899999 7999999999998886 67766653
No 322
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=72.95 E-value=2.8 Score=35.29 Aligned_cols=26 Identities=19% Similarity=0.489 Sum_probs=23.1
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCC
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRD 26 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~ 26 (252)
|++++|.|.| .|.||+.+++.+.+.+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcC
Confidence 5568999999 8999999999998876
No 323
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=72.92 E-value=3.7 Score=38.28 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=25.9
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|+..+|.|.|.|.+|+.+++.+.+.+ .+++.++
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~G-~~V~v~~ 33 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDSG-IKVTVAC 33 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTTT-CEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCc-CEEEEEE
Confidence 55578999999999999999998765 7754443
No 324
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=72.91 E-value=3.8 Score=38.24 Aligned_cols=32 Identities=28% Similarity=0.527 Sum_probs=25.6
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
..||+|+|.|.+|..++..+...+ ++++.+ |.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G-~~V~l~-D~ 68 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVG-ISVVAV-ES 68 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT-CEEEEE-CS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC-CeEEEE-EC
Confidence 358999999999999999887765 776554 44
No 325
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=72.76 E-value=3.7 Score=36.20 Aligned_cols=74 Identities=18% Similarity=0.200 Sum_probs=45.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~d 83 (252)
.||||+|.|.+|..+++++. .+ ++++..+ . +++.+..+.++ +. +. .+ + .++. ..+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG-~~V~v~d-~--~~~~~~~~~~~------l~-------~~-~~--~--~i~~--~~~ 67 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SK-HEVVLQD-V--SEKALEAAREQ------IP-------EE-LL--S--KIEF--TTT 67 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TT-SEEEEEC-S--CHHHHHHHHHH------SC-------GG-GG--G--GEEE--ESS
T ss_pred CeEEEEeeCHHHHHHHHHHH-cC-CEEEEEE-C--CHHHHHHHHHH------HH-------HH-Hh--C--CeEE--eCC
Confidence 59999999999999999998 65 7765554 4 45554443321 00 00 00 0 1222 245
Q ss_pred CCCCCCcccCccEEEecCCCCCC
Q 025476 84 PEEIPWAETGAEYVVESTGVFTD 106 (252)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~f~~ 106 (252)
++.+ .++|+||||......
T Consensus 68 ~~~~----~~aDlVieavpe~~~ 86 (293)
T 1zej_A 68 LEKV----KDCDIVMEAVFEDLN 86 (293)
T ss_dssp CTTG----GGCSEEEECCCSCHH
T ss_pred HHHH----cCCCEEEEcCcCCHH
Confidence 5543 389999999887543
No 326
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=72.59 E-value=3.6 Score=38.88 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=26.2
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~-~ivain 34 (252)
.+||+|+|.|.+|..++..+.+.+++ +++.++
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D 50 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQ 50 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEE
Confidence 47999999999999999988887337 766654
No 327
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=72.52 E-value=8.9 Score=33.64 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=23.9
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 025476 5 KIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~-~ivain 34 (252)
+|.|.|.|.+|...++.+...+ . +++++.
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~ 196 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRASG-AGPILVSD 196 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 6899999999999999887765 6 676664
No 328
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=72.44 E-value=3.2 Score=36.57 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=26.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
++|+|+|+|.+|+.+++++.+..+++-|.+.|.
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 589999999999999998876423655666665
No 329
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=71.83 E-value=4.1 Score=36.43 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=25.2
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCc-eEEEEeCC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~-~ivaind~ 36 (252)
|..+||+|+|.|.+|..++..+...+ + ++ .+-|.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~-~~~v-~L~Di 39 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKE-LGDV-VLFDI 39 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTT-CCEE-EEECS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCC-CCeE-EEEeC
Confidence 55579999999999999888877665 4 54 44444
No 330
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=71.79 E-value=3.9 Score=38.20 Aligned_cols=36 Identities=31% Similarity=0.397 Sum_probs=27.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhh
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMT 44 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~a 44 (252)
|||+|+|+|.+|..++..+.+ +.++++++ . +.+.+.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~--G~~V~~~D-~--~~~~v~ 72 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ--NHEVVALD-I--VQAKVD 72 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TSEEEEEC-S--CHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHc--CCeEEEEe-c--CHHHhh
Confidence 699999999999999887765 48876654 3 455443
No 331
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=71.58 E-value=4.3 Score=34.61 Aligned_cols=30 Identities=23% Similarity=0.375 Sum_probs=25.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivain 34 (252)
++|.|-| .|.||+.+++.+.+++ .+++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNN-WHAVGCG 33 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHhCC-CeEEEEc
Confidence 6999999 7999999999998876 7777664
No 332
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=71.47 E-value=2.4 Score=38.10 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=19.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcC
Q 025476 4 VKIGINGFGRIGRLVARVILQR 25 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~ 25 (252)
+||+|+|.|.+|..++..+.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHc
Confidence 6999999999999999888654
No 333
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=71.27 E-value=11 Score=33.21 Aligned_cols=29 Identities=28% Similarity=0.461 Sum_probs=23.9
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
+|.|.|.|.+|...++.+...+ .+++++.
T Consensus 182 ~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~ 210 (360)
T 1piw_A 182 KVGIVGLGGIGSMGTLISKAMG-AETYVIS 210 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEEc
Confidence 7899999999999988876665 6777765
No 334
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=71.23 E-value=3.6 Score=34.97 Aligned_cols=30 Identities=27% Similarity=0.265 Sum_probs=24.3
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+++|+|+|.+|+.+++.+.+.+ .+++ +.|.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~v~-v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LEVW-VWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CEEE-EEEC
Confidence 7999999999999999998876 5544 4444
No 335
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=71.21 E-value=4.4 Score=34.73 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=26.2
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
++|.|-| .|.||+.+++.+.+++ .+++++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 4899999 8999999999998876 77777653
No 336
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=70.74 E-value=4.2 Score=36.85 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=24.9
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|+|+|+|.||+.+++.+...+ .++++.+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~d 198 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMG-ATVTVLD 198 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 58999999999999999988776 6765544
No 337
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=70.58 E-value=5.2 Score=37.21 Aligned_cols=35 Identities=34% Similarity=0.588 Sum_probs=29.9
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~ 37 (252)
..+|+|.|||-+|+..++.+.++.+.++|+|.|..
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~ 243 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQELGSKVVAVSDSR 243 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 36899999999999999988872359999999973
No 338
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=70.47 E-value=3.7 Score=38.78 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=29.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhhee
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayl 46 (252)
.||+|+|.|.+|..++..+...+ ++++.. |. +.+.+..+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG-~~V~l~-D~--~~e~l~~~ 44 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHG-HQVLLY-DI--SAEALTRA 44 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CeEEEE-EC--CHHHHHHH
Confidence 59999999999999999888776 675544 44 55554443
No 339
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=70.04 E-value=5.1 Score=34.45 Aligned_cols=31 Identities=32% Similarity=0.460 Sum_probs=26.6
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|||.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEec
Confidence 5999999 7999999999998876 77777654
No 340
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=69.59 E-value=4.5 Score=37.99 Aligned_cols=31 Identities=16% Similarity=0.273 Sum_probs=26.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.||.|.|.|.+|+.+++.+.+.++++++.++
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~ 54 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAANDDINVTVAC 54 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSTTEEEEEEE
T ss_pred CEEEEECChHHHHHHHHHHHhCCCCeEEEEE
Confidence 5899999999999999999888667765554
No 341
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=69.49 E-value=4.3 Score=35.45 Aligned_cols=32 Identities=31% Similarity=0.478 Sum_probs=23.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCC-ceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDD-VELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~-~~ivaind~ 36 (252)
+||+|+|.|.+|..++..+...+- .++ .+-|.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V-~l~d~ 34 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDY-VFIDA 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEE-EEEcC
Confidence 499999999999999988876652 244 44444
No 342
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=69.08 E-value=4.1 Score=37.22 Aligned_cols=29 Identities=24% Similarity=0.417 Sum_probs=23.9
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|||+|+|+|.+|..++..+.+ + .+++.++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G-~~V~~~d 29 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q-NEVTIVD 29 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T-SEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhC-C-CEEEEEE
Confidence 489999999999999888876 4 7766663
No 343
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=68.82 E-value=4.3 Score=35.23 Aligned_cols=29 Identities=21% Similarity=0.387 Sum_probs=24.7
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
+|.|+|.|.+|...++.+...+ .+++++.
T Consensus 145 ~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~ 173 (315)
T 3goh_A 145 EVLIVGFGAVNNLLTQMLNNAG-YVVDLVS 173 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CEEEEEE
Confidence 6899999999999998887666 6888886
No 344
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=68.79 E-value=2.3 Score=39.85 Aligned_cols=94 Identities=20% Similarity=0.212 Sum_probs=54.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECC--eeEEEEee
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE--KPVTVFGV 81 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G--~~i~v~~~ 81 (252)
-+|-|.|-|+||..+++.+.+. +++..|.. +.+..-+|- ..++ + .++++| ....++.+
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~--~~v~iIE~---d~~r~~~la------~~l~--------~-~~Vi~GD~td~~~L~e 295 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQT--YSVKLIER---NLQRAEKLS------EELE--------N-TIVFCGDAADQELLTE 295 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--SEEEEEES---CHHHHHHHH------HHCT--------T-SEEEESCTTCHHHHHH
T ss_pred cEEEEEcchHHHHHHHHHhhhc--CceEEEec---CHHHHHHHH------HHCC--------C-ceEEeccccchhhHhh
Confidence 3799999999999999987543 55555543 333332221 0111 3 455544 23333333
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHH-hHHHHHhCCCCEEEEc
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKD-KAAAHLKGGAKKVIIS 124 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~-~a~~h~~~GakkViis 124 (252)
.+ + ...|+++-+|+.....- .+-.+.+.|++|+|.-
T Consensus 296 e~---i----~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~ 332 (461)
T 4g65_A 296 EN---I----DQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVL 332 (461)
T ss_dssp TT---G----GGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred cC---c----hhhcEEEEcccCcHHHHHHHHHHHHcCCcccccc
Confidence 22 2 26799999999764332 2223446899997664
No 345
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=68.76 E-value=5.2 Score=34.31 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=27.0
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|+.++|-|-| .|.||+.+++.+.+++ .+++++..
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKG-YEVYGADR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 5557999999 7999999999998876 77777653
No 346
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=68.75 E-value=4.5 Score=38.46 Aligned_cols=30 Identities=20% Similarity=0.386 Sum_probs=24.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|+|+|+|.||+.+++.+...+ .++++++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G-a~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG-ARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEe
Confidence 58999999999999999988776 6655443
No 347
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=68.73 E-value=4.2 Score=35.23 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=27.4
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCC-CceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~-~~~ivaind 35 (252)
.+||.|-| .|.||+.+++.+.+++ .+++++++.
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 47999999 7999999999998765 477777764
No 348
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=68.60 E-value=5.4 Score=34.29 Aligned_cols=30 Identities=27% Similarity=0.512 Sum_probs=25.8
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivain 34 (252)
++|.|-| .|.||+.+++.+.+++ .+++++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~ 32 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG-IDLIVFD 32 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC-CEEEEEe
Confidence 4899999 8999999999998876 7777774
No 349
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=68.53 E-value=4.8 Score=37.82 Aligned_cols=31 Identities=13% Similarity=0.347 Sum_probs=25.7
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.|||+|+|.|.+|..++..+.+.+ .+++.++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G-~~V~~~d 38 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG-HDVFCLD 38 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CceEEEECcCHHHHHHHHHHHhCC-CEEEEEE
Confidence 479999999999999998887776 6766653
No 350
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=68.35 E-value=5 Score=35.20 Aligned_cols=32 Identities=28% Similarity=0.381 Sum_probs=25.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+||+|+|.|.+|..++..+...+..+ |.+-|.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~-V~l~D~ 36 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLAD-VVLFDI 36 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCce-EEEEeC
Confidence 79999999999999998887665226 455555
No 351
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=68.00 E-value=5.6 Score=34.34 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=26.9
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|+ ++|-|-| .|.||+.+++.+.+.+ .+++++.
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (348)
T 1ek6_A 1 MA-EKVLVTGGAGYIGSHTVLELLEAG-YLPVVID 33 (348)
T ss_dssp CC-SEEEEETTTSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 54 7999999 8999999999998876 6777764
No 352
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=67.78 E-value=12 Score=33.68 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=27.8
Q ss_pred cceEEEEc-CChhHHHHHHH--HHcCCCceEEEEeCCC
Q 025476 3 KVKIGING-FGRIGRLVARV--ILQRDDVELVAVNDPF 37 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~--~~~~~~~~ivaind~~ 37 (252)
..||-|.| .|+.++.++.. +.++++.++|+.-+|.
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~ 47 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPF 47 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTT
T ss_pred CCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCC
Confidence 36899999 58888877776 4467789999999884
No 353
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=67.68 E-value=13 Score=34.65 Aligned_cols=82 Identities=17% Similarity=0.187 Sum_probs=52.3
Q ss_pred ceEEEEcCC----hhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE
Q 025476 4 VKIGINGFG----RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (252)
Q Consensus 4 ~kv~InG~G----rIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~ 79 (252)
-+|+|+|.+ ++|+.+++.+.+.+...+..|| |. ++. +.|. +++
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVn-P~-----------~~~-------------------i~G~--~~y 55 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVN-IK-----------EEE-------------------VQGV--KAY 55 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEEC-SS-----------CSE-------------------ETTE--ECB
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEEC-CC-----------CCe-------------------ECCE--ecc
Confidence 479999965 8999999999776546666676 41 011 1221 222
Q ss_pred eecCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEE
Q 025476 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (252)
Q Consensus 80 ~~~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkVii 123 (252)
.+.++++ ..+|+++-+++.....+......+.|+|.+++
T Consensus 56 --~sl~~lp---~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 56 --KSVKDIP---DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp --SSTTSCS---SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred --CCHHHcC---CCCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 3344444 15788877777666666666777778887654
No 354
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=67.50 E-value=5.9 Score=34.83 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=26.4
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
++|-|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 56 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG-YEVHGIVR 56 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-CEEEEEEC
Confidence 5899999 8999999999998876 77777654
No 355
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=67.42 E-value=7.8 Score=34.61 Aligned_cols=28 Identities=21% Similarity=0.288 Sum_probs=23.0
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCc-eEEEE
Q 025476 5 KIGINGFGRIGRLVARVILQRDDV-ELVAV 33 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~-~ivai 33 (252)
+|.|.|.|.+|...++.+...+ . +++++
T Consensus 185 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~ 213 (370)
T 4ej6_A 185 TVAILGGGVIGLLTVQLARLAG-ATTVILS 213 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEE
Confidence 7899999999999999887776 5 55555
No 356
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=67.33 E-value=4.2 Score=37.20 Aligned_cols=30 Identities=27% Similarity=0.541 Sum_probs=24.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~-~ivain 34 (252)
.+|+|+|+|.+|+.+++.+...+ + +++++|
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G-~~~V~v~~ 198 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG-VRAVLVAN 198 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CSEEEEEC
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CCEEEEEe
Confidence 58999999999999999987765 6 665554
No 357
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=66.63 E-value=4 Score=34.62 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=26.9
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcC-CCceEEEEeC
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQR-DDVELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~-~~~~ivaind 35 (252)
|+ ++|.|-| .|.||+.+++.+.++ ++.+++++..
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 36 (312)
T 2yy7_A 1 MN-PKILIIGACGQIGTELTQKLRKLYGTENVIASDI 36 (312)
T ss_dssp CC-CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred CC-ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 44 7999999 799999999999877 3467766643
No 358
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=66.51 E-value=5.4 Score=34.71 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=26.7
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.++|.|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDN 59 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 36899999 7999999999998876 67777653
No 359
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=66.49 E-value=6 Score=35.03 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=24.9
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di 40 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDV 40 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 3799999999999988887776653333444454
No 360
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=65.96 E-value=5.7 Score=36.42 Aligned_cols=31 Identities=16% Similarity=0.069 Sum_probs=25.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+|+|+|+|.+|+.+++.+...+ .+++ +.|.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V~-v~D~ 203 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLG-AIVR-AFDT 203 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEE-EEcC
Confidence 58999999999999999888777 6644 4444
No 361
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=65.86 E-value=3.9 Score=38.82 Aligned_cols=92 Identities=14% Similarity=0.196 Sum_probs=55.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCc---eEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDV---ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~---~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~ 80 (252)
.||.|+|+|-||+.+++.+.+++++ +++.+ |+..... .+. + .+ |.++...+
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~---~~~--~-----------------~~---g~~~~~~~ 67 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKV---DVA--Q-----------------QY---GVSFKLQQ 67 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSC---CHH--H-----------------HH---TCEEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhh---hHH--h-----------------hc---CCceeEEe
Confidence 6899999999999999999887765 45444 4421111 111 0 00 11111101
Q ss_pred e-cC-----CCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 81 V-RN-----PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 81 ~-~d-----p~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
- .+ .+.+ -++ + |+|+.++-.+.+...++..+++|+ -.++..
T Consensus 68 Vdadnv~~~l~aL-l~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlDTa 114 (480)
T 2ph5_A 68 ITPQNYLEVIGST-LEE-N-DFLIDVSIGISSLALIILCNQKGA--LYINAA 114 (480)
T ss_dssp CCTTTHHHHTGGG-CCT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEESS
T ss_pred ccchhHHHHHHHH-hcC-C-CEEEECCccccCHHHHHHHHHcCC--CEEECC
Confidence 0 01 1111 122 3 999998888888899999999999 677654
No 362
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=65.76 E-value=6 Score=35.70 Aligned_cols=35 Identities=29% Similarity=0.372 Sum_probs=25.4
Q ss_pred CCcceEEEEcC-ChhHHHHHHHHHcCCCc-eEEEEeCC
Q 025476 1 MGKVKIGINGF-GRIGRLVARVILQRDDV-ELVAVNDP 36 (252)
Q Consensus 1 m~~~kv~InG~-GrIGr~v~r~~~~~~~~-~ivaind~ 36 (252)
|..+||+|+|. |.+|..++..+...+.. ++ .+-|.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~ev-vLiDi 42 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNL-CLYDP 42 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCE-EEECS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEE-EEEeC
Confidence 34579999997 99999998877776632 43 44444
No 363
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=65.73 E-value=2.5 Score=35.44 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=26.0
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|| .+|.|-| .|.||+.+++.+.+.+ .+++++.
T Consensus 1 M~-~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (267)
T 3ay3_A 1 ML-NRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSD 33 (267)
T ss_dssp CE-EEEEEESTTSHHHHHHGGGGGGTE-EEEEECC
T ss_pred CC-ceEEEECCCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 55 5899999 7999999999988775 6766654
No 364
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=65.46 E-value=5.4 Score=35.36 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=29.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
.+++|+|.|.+|+.+++++.+...++.+.|.|. +++..
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r--~~~~a 163 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV--REKAA 163 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS--SHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC--CHHHH
Confidence 589999999999999999876334777778776 44443
No 365
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=65.29 E-value=5 Score=36.71 Aligned_cols=33 Identities=24% Similarity=0.173 Sum_probs=29.3
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
||..||.|.|-|.+|+.++|++.+.+ ++++++.
T Consensus 4 m~~~kiLI~g~g~~a~~i~~aa~~~G-~~~v~v~ 36 (446)
T 3ouz_A 4 MEIKSILIANRGEIALRALRTIKEMG-KKAICVY 36 (446)
T ss_dssp TCCCEEEECCCHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cccceEEEECCCHHHHHHHHHHHHcC-CEEEEEE
Confidence 67679999999999999999998886 8888885
No 366
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=65.28 E-value=3.5 Score=36.86 Aligned_cols=91 Identities=14% Similarity=0.229 Sum_probs=50.8
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecC
Q 025476 5 KIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (252)
Q Consensus 5 kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~d 83 (252)
+|.|+| .|.+|...++.+......+++++.. +.+.+.++.+ .|- .-+++-+. .+. ..
T Consensus 174 ~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~----lGa------------d~vi~~~~-~~~--~~ 231 (363)
T 4dvj_A 174 AILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKS----LGA------------HHVIDHSK-PLA--AE 231 (363)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHH----TTC------------SEEECTTS-CHH--HH
T ss_pred EEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHH----cCC------------CEEEeCCC-CHH--HH
Confidence 588999 9999999888876533478777754 2333322221 221 11122110 000 01
Q ss_pred CCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCC
Q 025476 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAK 119 (252)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~Gak 119 (252)
..++ ...++|+||||+|.....+.+...++.|-+
T Consensus 232 v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~ 265 (363)
T 4dvj_A 232 VAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQGR 265 (363)
T ss_dssp HHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTCE
T ss_pred HHHh--cCCCceEEEECCCchhhHHHHHHHhcCCCE
Confidence 1111 224899999999965445566667776653
No 367
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=65.25 E-value=5.3 Score=34.37 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=24.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+++|+|.|.+|+.+++.+.+.+ ++++..|
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g-~~V~v~~ 159 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG-AKVFLWN 159 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHcC-CEEEEEE
Confidence 58999999999999999998776 5654443
No 368
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=64.94 E-value=4.5 Score=36.25 Aligned_cols=29 Identities=24% Similarity=0.511 Sum_probs=23.9
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
+|.|+|.|.+|...++.+...+ .+++++.
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~ 225 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAMG-AHVVAFT 225 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 6899999999999999887665 6766665
No 369
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=64.68 E-value=6 Score=34.17 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=26.3
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCC-CceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~-~~~ivaind 35 (252)
++|.|-| .|.||+.+++.+.+++ +.+++++..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 5899999 8999999999998763 477777653
No 370
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=64.19 E-value=6.3 Score=33.43 Aligned_cols=33 Identities=27% Similarity=0.353 Sum_probs=26.9
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+++|.|.| .|.||+.+++.+.++++.+++++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R 38 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR 38 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEc
Confidence 36899999 7999999999998765477777653
No 371
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=64.16 E-value=13 Score=32.28 Aligned_cols=31 Identities=19% Similarity=0.374 Sum_probs=24.8
Q ss_pred eEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 5 kv~InG~-GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+|.|.|. |.+|...++.+...+ .+++++...
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~ 183 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGK 183 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESC
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 6899995 999999999887766 677776543
No 372
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=64.16 E-value=3.9 Score=33.81 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=23.7
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
..++.|.|+|++|+.+++.+.+.+ . ++++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g-~-v~vid 38 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE-V-FVLAE 38 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE-E-EEEES
T ss_pred CCEEEEECCChHHHHHHHHHHhCC-e-EEEEE
Confidence 358999999999999999887665 5 65553
No 373
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=64.15 E-value=6.6 Score=35.57 Aligned_cols=31 Identities=13% Similarity=0.140 Sum_probs=25.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+|+|+|+|.+|+.+++.+...+ .++ .+.|.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V-~~~d~ 203 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLG-AVV-MATDV 203 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEE-EEEeC
Confidence 58999999999999999888776 674 45555
No 374
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=64.08 E-value=7.3 Score=36.65 Aligned_cols=31 Identities=23% Similarity=0.229 Sum_probs=25.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.||+|+|.|.+|..++..+...+ ++++.. |.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG-~~V~l~-D~ 85 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAG-IETFLV-VR 85 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEE-EC
Confidence 58999999999999999888776 776554 44
No 375
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=64.01 E-value=8.1 Score=33.76 Aligned_cols=32 Identities=22% Similarity=0.298 Sum_probs=26.8
Q ss_pred cceEEEEc-CChhHHHHHHHHHc--CCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQ--RDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~--~~~~~ivaind 35 (252)
.++|-|-| .|.||+.+++.+.+ .+ .+++++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g-~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPK-AKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTT-SEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCC-CeEEEEEC
Confidence 36899999 89999999999988 54 88877754
No 376
>2jv8_A Uncharacterized protein NE1242; solution structure, NESG, structural genomics, unknown function, PSI-2; NMR {Nitrosomonas europaea atcc 19718}
Probab=63.93 E-value=4.2 Score=27.50 Aligned_cols=30 Identities=17% Similarity=0.457 Sum_probs=23.7
Q ss_pred cceEEcCCeeeEECCeeEEEEeecCCCCCCCc
Q 025476 59 HELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 90 (252)
Q Consensus 59 ~~v~~~~~~~l~i~G~~i~v~~~~dp~~~~w~ 90 (252)
+++..+++..|.+|||+|... .|.-+-+|.
T Consensus 11 gtidieddtsltingkeisyv--hdavknkws 40 (73)
T 2jv8_A 11 GTIDIEDDTSLTINGKEISYV--HDAVKNKWS 40 (73)
T ss_dssp EEEEEETTEEEEETTEECCCC--CCSSSCCCC
T ss_pred CeeeeccCceeEECCEEeehH--HHHHhcccc
Confidence 678888876899999999875 566666785
No 377
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=63.66 E-value=21 Score=32.78 Aligned_cols=86 Identities=16% Similarity=0.187 Sum_probs=50.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCC-hhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~-~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
.||.|+|.|..|...++.+.+++ .++.+ .|.... .......| +.. | +++....
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G-~~V~~-~D~~~~~~~~~~~~L--------------~~~--------g--i~~~~g~ 63 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG-AIVTV-NDGKPFDENPTAQSL--------------LEE--------G--IKVVCGS 63 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT-CEEEE-EESSCGGGCHHHHHH--------------HHT--------T--CEEEESC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEE-EeCCcccCChHHHHH--------------HhC--------C--CEEEECC
Confidence 58999999999999999888887 66544 443110 00000001 001 1 1222223
Q ss_pred CCCCCCCcccC-ccEEEecCCCCCCHHhHHHHHhCCC
Q 025476 83 NPEEIPWAETG-AEYVVESTGVFTDKDKAAAHLKGGA 118 (252)
Q Consensus 83 dp~~~~w~~~~-vdiV~e~tg~f~~~~~a~~h~~~Ga 118 (252)
+++++ + .+ .|+|+=+.|.-.+........+.|.
T Consensus 64 ~~~~~-~--~~~~d~vv~spgi~~~~p~~~~a~~~gi 97 (451)
T 3lk7_A 64 HPLEL-L--DEDFCYMIKNPGIPYNNPMVKKALEKQI 97 (451)
T ss_dssp CCGGG-G--GSCEEEEEECTTSCTTSHHHHHHHHTTC
T ss_pred ChHHh-h--cCCCCEEEECCcCCCCChhHHHHHHCCC
Confidence 44432 1 14 8999999997666655666667777
No 378
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=63.48 E-value=5.4 Score=36.69 Aligned_cols=31 Identities=13% Similarity=0.018 Sum_probs=25.0
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.||+|+|+|++|+..++.+...+ .+++ +.|.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lG-a~V~-v~D~ 215 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLG-AKTT-GYDV 215 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT-CEEE-EECS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 58999999999999999887666 6644 4555
No 379
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=63.47 E-value=12 Score=33.63 Aligned_cols=29 Identities=17% Similarity=0.288 Sum_probs=23.8
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 025476 5 KIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~-~ivain 34 (252)
+|.|+|.|.+|...++.+...+ . +++++.
T Consensus 216 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 245 (404)
T 3ip1_A 216 NVVILGGGPIGLAAVAILKHAG-ASKVILSE 245 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 6899999999999999887776 5 666664
No 380
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=63.41 E-value=5.7 Score=35.02 Aligned_cols=32 Identities=41% Similarity=0.622 Sum_probs=23.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCc-eEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~-~ivaind~ 36 (252)
|||+|+|.|.+|..++..+...+.. +++ +-|.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~-l~D~ 33 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMV-LIDV 33 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEeC
Confidence 4899999999999998888765522 444 4444
No 381
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=63.06 E-value=5.1 Score=35.61 Aligned_cols=129 Identities=12% Similarity=0.184 Sum_probs=67.8
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeecCC
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNP 84 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~dp 84 (252)
+|.|.|.|.+|...++.+...+ .+++++.. +.+.+..+-+ +|- + ..++ .+.
T Consensus 192 ~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~----lGa----------~--~vi~---------~~~ 242 (363)
T 3uog_A 192 RVVVQGTGGVALFGLQIAKATG-AEVIVTSS---SREKLDRAFA----LGA----------D--HGIN---------RLE 242 (363)
T ss_dssp EEEEESSBHHHHHHHHHHHHTT-CEEEEEES---CHHHHHHHHH----HTC----------S--EEEE---------TTT
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CEEEEEec---CchhHHHHHH----cCC----------C--EEEc---------CCc
Confidence 7899999999999999887776 68777653 2333322211 121 0 0111 000
Q ss_pred CCCCC--------cccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCCCCCeEEeecCccc-cCCCCCeEEcCCch
Q 025476 85 EEIPW--------AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENE-YKPELNIVSNASCT 155 (252)
Q Consensus 85 ~~~~w--------~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~vV~gVN~~~-~~~~~~IIS~asCt 155 (252)
+ +| +..++|+||||+|. ...+.+-..++.|-+=+++..++.. .. .++... +.++..+...-..+
T Consensus 243 ~--~~~~~v~~~~~g~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~--~~--~~~~~~~~~~~~~i~g~~~~~ 315 (363)
T 3uog_A 243 E--DWVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPDGRISVIGVLEGF--EV--SGPVGPLLLKSPVVQGISVGH 315 (363)
T ss_dssp S--CHHHHHHHHHTTCCEEEEEEETTS-SCHHHHHHHEEEEEEEEEECCCSSC--EE--CCBTTHHHHTCCEEEECCCCC
T ss_pred c--cHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhhcCCEEEEEecCCCc--cc--CcCHHHHHhCCcEEEEEecCC
Confidence 0 11 11379999999994 4566666777665533333332221 11 122211 11234454444444
Q ss_pred hhhHHHHHHHHHhh
Q 025476 156 TNCLAPLAKVIHDK 169 (252)
Q Consensus 156 T~~Lap~lk~L~~~ 169 (252)
...+.-+++.+.+.
T Consensus 316 ~~~~~~~~~l~~~g 329 (363)
T 3uog_A 316 RRALEDLVGAVDRL 329 (363)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC
Confidence 55666677766653
No 382
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=62.97 E-value=5.4 Score=35.07 Aligned_cols=43 Identities=16% Similarity=0.252 Sum_probs=31.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheee
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMF 47 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll 47 (252)
|||.|-| .|.||+.+++.+.+++.++++.++- ..+.+.+..++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~-~~d~~~l~~~~ 44 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHR-QTKEEELESAL 44 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCT-TCCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECC-CCCHHHHHHHh
Confidence 4899999 8999999999998887557766643 13555554444
No 383
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=62.94 E-value=7 Score=35.31 Aligned_cols=93 Identities=17% Similarity=0.196 Sum_probs=54.2
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
..||+|.|.|.+|+.+++.+.+. .++ .|.|. +.+....+.+ .. + .+.++ + .
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~--~~V-~V~~R--~~~~a~~la~-----------~~----~-~~~~d-----~---~ 66 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDV-YIGDV--NNENLEKVKE-----------FA----T-PLKVD-----A---S 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEE-EEEES--CHHHHHHHTT-----------TS----E-EEECC-----T---T
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC--CeE-EEEEC--CHHHHHHHHh-----------hC----C-eEEEe-----c---C
Confidence 36999999999999999998765 554 45554 4444322210 00 0 01110 0 0
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCC
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~p 126 (252)
+.+.+.=--.++|+|+.|++.....+-+...+++|+ .+++..
T Consensus 67 ~~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~--~~vD~s 108 (365)
T 2z2v_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTC--CEEECC
T ss_pred CHHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCC--eEEEcc
Confidence 111000000268999999887666667778888888 566544
No 384
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=62.82 E-value=3.7 Score=36.39 Aligned_cols=29 Identities=24% Similarity=0.242 Sum_probs=23.2
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCce-EEEEe
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVE-LVAVN 34 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~-ivain 34 (252)
+|.|+|.|.+|...++.+...+ .+ ++++.
T Consensus 182 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 211 (363)
T 3m6i_A 182 PVLICGAGPIGLITMLCAKAAG-ACPLVITD 211 (363)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 6889999999999999887766 55 55553
No 385
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=62.72 E-value=7.3 Score=33.52 Aligned_cols=31 Identities=16% Similarity=0.128 Sum_probs=26.0
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+|||+|.|-| .|+.+++++.+.+ ++++.+..
T Consensus 2 ~m~Ililg~g-~~~~l~~a~~~~G-~~v~~~~~ 32 (334)
T 2r85_A 2 KVRIATYASH-SALQILKGAKDEG-FETIAFGS 32 (334)
T ss_dssp CSEEEEESST-THHHHHHHHHHTT-CCEEEESC
T ss_pred ceEEEEECCh-hHHHHHHHHHhCC-CEEEEEEC
Confidence 5899999999 9999999998876 77777653
No 386
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=62.34 E-value=8.4 Score=33.88 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=26.2
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.+|.|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r 60 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG-YEVHGLIR 60 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC-CEEEEEec
Confidence 5899999 7999999999998876 77777653
No 387
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=62.22 E-value=8 Score=33.96 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=25.1
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCc------eEEEEe
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDV------ELVAVN 34 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~------~ivain 34 (252)
.|||.|.| .|.||..+++.+.+.+.+ +++.+.
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE 42 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEe
Confidence 47999999 599999999988876633 666553
No 388
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=62.19 E-value=5.6 Score=35.54 Aligned_cols=29 Identities=21% Similarity=0.441 Sum_probs=23.4
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 025476 5 KIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~-~ivain 34 (252)
+|.|.|.|.+|...++.+...+ . +++++.
T Consensus 196 ~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~ 225 (378)
T 3uko_A 196 NVAIFGLGTVGLAVAEGAKTAG-ASRIIGID 225 (378)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT-CSCEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 6899999999999988887665 5 666664
No 389
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=62.07 E-value=8.9 Score=32.87 Aligned_cols=32 Identities=25% Similarity=0.401 Sum_probs=26.5
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|||.|-| .|.||+.+++.+.++++.+++++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 33 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 33 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 3899999 7999999999998874578777754
No 390
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=62.04 E-value=11 Score=33.22 Aligned_cols=31 Identities=23% Similarity=0.240 Sum_probs=24.6
Q ss_pred ceEEEEcCChhHHHH-HHHH-HcCCCce-EEEEeC
Q 025476 4 VKIGINGFGRIGRLV-ARVI-LQRDDVE-LVAVND 35 (252)
Q Consensus 4 ~kv~InG~GrIGr~v-~r~~-~~~~~~~-ivaind 35 (252)
-+|.|+|.|.+|... ++.+ ...+ .+ ++++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeC
Confidence 479999999999999 8877 6555 65 777754
No 391
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=61.75 E-value=7.4 Score=33.83 Aligned_cols=32 Identities=9% Similarity=0.066 Sum_probs=26.9
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.++|.|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 41 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSL 41 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CeEEEEeC
Confidence 36899999 8999999999998876 67777654
No 392
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=61.60 E-value=3.7 Score=36.50 Aligned_cols=30 Identities=17% Similarity=0.399 Sum_probs=24.1
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+|.|.|.|.+|...++.+...+ .+++++..
T Consensus 183 ~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~ 212 (357)
T 2cf5_A 183 RGGILGLGGVGHMGVKIAKAMG-HHVTVISS 212 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CeEEEEeC
Confidence 6899999999999988876665 57766653
No 393
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=61.39 E-value=6.2 Score=33.42 Aligned_cols=31 Identities=29% Similarity=0.278 Sum_probs=25.6
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
++|.|.| .|.||+.+++.+.+++ .+++++.-
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 34 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG-NPTYALVR 34 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT-CCEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC-CcEEEEEC
Confidence 5899999 7999999999998876 66666643
No 394
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=61.23 E-value=6.4 Score=32.08 Aligned_cols=32 Identities=22% Similarity=0.371 Sum_probs=25.9
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCc-eEEEEe
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDV-ELVAVN 34 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~-~ivain 34 (252)
.+++.|-| .|.||+.+++.+.+++.+ +++++.
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~ 51 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIG 51 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEE
Confidence 36899999 899999999999887732 766664
No 395
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=61.19 E-value=8.4 Score=34.59 Aligned_cols=30 Identities=20% Similarity=0.346 Sum_probs=25.0
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.+|+|.|.|.||+.+++.+...+ .++++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d 196 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMG-AQVTILD 196 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEE
Confidence 58999999999999999988777 5765554
No 396
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=61.02 E-value=9.9 Score=33.62 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=26.4
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
++|.|-| .|.||+.+++.+.+++ .+++++..
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 61 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEG-HYVIASDW 61 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CeEEEECCccHHHHHHHHHHHHCC-CeEEEEEC
Confidence 6899999 7999999999998876 77777654
No 397
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=60.79 E-value=8.7 Score=35.64 Aligned_cols=112 Identities=14% Similarity=0.154 Sum_probs=61.3
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCC-CceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCe---ee--EE--CCe
Q 025476 4 VKIGING-FGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDK---TL--LF--GEK 74 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~-~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~---~l--~i--~G~ 74 (252)
-+|.|.| +|-||.+.+..+...| .|+++++.- ..+.+.++...+ .|.+ .-+-..+.+ .| .+ .|.
T Consensus 10 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~a-g~nv~~L~~q~~---~f~p---~~v~v~d~~~~~~L~~~l~~~~~ 82 (406)
T 1q0q_A 10 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA-GKNVTRMVEQCL---EFSP---RYAVMDDEASAKLLKTMLQQQGS 82 (406)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE-SSCHHHHHHHHH---HHCC---SEEEESSHHHHHHHHHHHHHTTC
T ss_pred eeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEc-CCCHHHHHHHHH---HhCC---CEEEEcCHHHHHHHHHHhhcCCC
Confidence 4899999 8999999999887776 499999976 346665544332 0110 001111100 00 00 121
Q ss_pred eEEEEeec-CCCCC-CCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcC
Q 025476 75 PVTVFGVR-NPEEI-PWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (252)
Q Consensus 75 ~i~v~~~~-dp~~~-~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ 125 (252)
.++++... ...++ .+ .++|+|+-+.-.+....---..+++| |++.+.+
T Consensus 83 ~~~v~~G~~~l~~~a~~--~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~iaLAN 132 (406)
T 1q0q_A 83 RTEVLSGQQAACDMAAL--EDVDQVMAAIVGAAGLLPTLAAIRAG-KTILLAN 132 (406)
T ss_dssp CCEEEESHHHHHHHHTC--TTCCEEEECCSSGGGHHHHHHHHHTT-CEEEECC
T ss_pred CcEEEeCHHHHHHHhcC--CCCCEEEEccccHhHHHHHHHHHHCC-CeEEEec
Confidence 22333211 11111 11 25899998876666665555677888 5666643
No 398
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=60.78 E-value=8.7 Score=35.51 Aligned_cols=43 Identities=21% Similarity=0.263 Sum_probs=33.0
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCC-CceEEEEeCCCCChhhhhee
Q 025476 4 VKIGING-FGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYM 46 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~-~~~ivaind~~~~~~~~ayl 46 (252)
.||.|.| +|-||.+.+..+...| .|+++++.--..+.+.++..
T Consensus 22 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q 66 (398)
T 2y1e_A 22 LRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQ 66 (398)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHH
T ss_pred eEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHH
Confidence 4799999 8999999999888776 49999997622356555443
No 399
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=60.70 E-value=10 Score=32.29 Aligned_cols=32 Identities=13% Similarity=0.188 Sum_probs=26.7
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.++|.|-| .|.||+.+++.+.+++ .+++++..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 43 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHG-YKVRGTAR 43 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 46899999 7999999999998876 77776654
No 400
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=60.56 E-value=8 Score=34.48 Aligned_cols=33 Identities=3% Similarity=-0.153 Sum_probs=26.6
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|.|+||++|-| .|+.+++++.+.+ +++++++..
T Consensus 1 ~~~~I~~lGsg-l~~~~~~aAk~lG-~~viv~d~~ 33 (320)
T 2pbz_A 1 MSLIVSTIASH-SSLQILLGAKKEG-FKTRLYVSP 33 (320)
T ss_dssp ---CEEEESST-THHHHHHHHHHTT-CCEEEEECT
T ss_pred CceEEEEEcCH-hHHHHHHHHHHCC-CEEEEEECC
Confidence 45899999999 9999999998887 888887764
No 401
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=60.47 E-value=10 Score=32.54 Aligned_cols=32 Identities=28% Similarity=0.388 Sum_probs=26.6
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.++|-|-| .|.||+.+++.+.+++ .+++++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG-YDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEec
Confidence 46899999 8999999999998886 77766643
No 402
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=60.36 E-value=8.4 Score=35.70 Aligned_cols=31 Identities=19% Similarity=0.148 Sum_probs=25.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.||+|+|+|++|...++.+...+ .++ .+.|.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lG-a~V-~v~D~ 221 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLG-AVV-SATDV 221 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEE-EEECS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEE-EEEcC
Confidence 59999999999999999988776 664 45565
No 403
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=59.95 E-value=8.4 Score=34.24 Aligned_cols=32 Identities=25% Similarity=0.345 Sum_probs=25.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+||+|+|.|.+|..++..+...+.++ |.+-|.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~ 41 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELAD-VVLYDV 41 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 69999999999999988887665336 566665
No 404
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=59.87 E-value=8.7 Score=33.98 Aligned_cols=24 Identities=21% Similarity=0.335 Sum_probs=20.9
Q ss_pred cceEEEEcC-ChhHHHHHHHHHcCC
Q 025476 3 KVKIGINGF-GRIGRLVARVILQRD 26 (252)
Q Consensus 3 ~~kv~InG~-GrIGr~v~r~~~~~~ 26 (252)
.+||.|.|. |.||..++..+...+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~ 29 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGD 29 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC
Confidence 489999996 999999998887765
No 405
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=59.82 E-value=9.1 Score=33.42 Aligned_cols=29 Identities=21% Similarity=0.352 Sum_probs=24.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
|||.|+|.|..|-..+..|...+ ++++.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G-~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG-IKVTIY 30 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CCEEEE
Confidence 69999999999999988887765 776666
No 406
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=59.80 E-value=11 Score=33.70 Aligned_cols=34 Identities=32% Similarity=0.412 Sum_probs=26.0
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+||+|+|.|.+|..++..+...+...-+.+-|.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di 52 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDV 52 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC
Confidence 4799999999999998888877764434455555
No 407
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=59.72 E-value=10 Score=32.77 Aligned_cols=31 Identities=32% Similarity=0.633 Sum_probs=26.4
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
++|.|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 53 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERG-DKVVGIDN 53 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 6899999 8999999999998876 77777653
No 408
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=59.55 E-value=10 Score=33.11 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=24.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+||+|+|.|.+|..++..+...+.+.-+.+-|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~ 33 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDR 33 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 499999999999999888877663333445454
No 409
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=59.50 E-value=15 Score=32.57 Aligned_cols=29 Identities=17% Similarity=0.292 Sum_probs=23.7
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 025476 5 KIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~-~ivain 34 (252)
+|.|.|.|.+|...++.+...+ . +++++.
T Consensus 194 ~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 223 (374)
T 2jhf_A 194 TCAVFGLGGVGLSVIMGCKAAG-AARIIGVD 223 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 6899999999999999887766 5 666664
No 410
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=59.48 E-value=7.7 Score=37.18 Aligned_cols=31 Identities=23% Similarity=0.324 Sum_probs=24.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcC------CCceEEEEeC
Q 025476 4 VKIGINGFGRIGRLVARVILQR------DDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~------~~~~ivaind 35 (252)
.||||+|+|.+|..+++++.+. + ++++.-++
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G-~~ViVg~r 91 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKIGLR 91 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCC-CEEEEEEC
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCC-CEEEEEeC
Confidence 5899999999999999999776 4 66554333
No 411
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=59.38 E-value=10 Score=34.74 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=26.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.||+|.|-|.+|+.+++++.+.+ +++++++
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~lG-~~v~v~d 65 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSMG-YRVAVLD 65 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998776 8877774
No 412
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=59.22 E-value=9.5 Score=33.73 Aligned_cols=32 Identities=28% Similarity=0.283 Sum_probs=26.6
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.++|.|.| .|.||+.+++.+.+++ .+++++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 47899999 8999999999998876 77777653
No 413
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=58.99 E-value=10 Score=32.63 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=26.8
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.++|.|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQG-HEILVIDN 52 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 47899999 7999999999998876 77777654
No 414
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=58.34 E-value=11 Score=32.30 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=26.8
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.+||.|-| .|.||+.+++.+.+++ .+++++..
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 46 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVA 46 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeC
Confidence 37999999 8999999999998876 78777754
No 415
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=58.06 E-value=11 Score=31.98 Aligned_cols=31 Identities=26% Similarity=0.479 Sum_probs=25.8
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|||-|-| .|.||+.+++.+.+++ .+++++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG-YEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 4899999 7999999999998886 67776643
No 416
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=58.02 E-value=11 Score=33.32 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=26.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.||+|.|-|..|+.+++++.+.+ ++++.++.
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G-~~v~~~~~ 32 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMG-FYVIVLDP 32 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 48999999999999999988776 78777753
No 417
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=57.96 E-value=8.2 Score=32.86 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=24.1
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
++|-|-| .|.||+.+++.+.+++ .++.+..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEc
Confidence 3899999 7999999999998877 5555544
No 418
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=57.72 E-value=10 Score=33.94 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=25.9
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 3699999999999999988877664434455554
No 419
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=57.67 E-value=9.6 Score=34.03 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=27.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
-||+|+|.|.+|+.++..+...+ +++ .+.|+ +++.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G-~~V-~l~D~--~~~~l 42 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGG-FRV-KLYDI--EPRQI 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCE-EEECS--CHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCC-CeE-EEEEC--CHHHH
Confidence 48999999999999988777765 764 45566 45543
No 420
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=57.46 E-value=9.8 Score=33.09 Aligned_cols=32 Identities=19% Similarity=0.373 Sum_probs=25.8
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
++|.|-| .|.||+.+++.+.+++..+++++..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 79 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDN 79 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 6899999 7999999999998876466666654
No 421
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=57.39 E-value=11 Score=35.18 Aligned_cols=31 Identities=19% Similarity=0.401 Sum_probs=26.7
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|||.|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R 179 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTGG-HEVIQLVR 179 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 6999999 8999999999998886 67777754
No 422
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=57.30 E-value=10 Score=33.68 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=25.3
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+||+|+|.|.+|..++..+...+.+.-+.+-|.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 4799999999999988877766554444455555
No 423
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=57.13 E-value=12 Score=33.65 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=26.2
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|++++|.|+|.|..|...+..+.+.+ .+++.+.
T Consensus 1 m~~~~v~iiG~G~~Gl~~A~~l~~~g-~~v~v~E 33 (384)
T 2bi7_A 1 MKSKKILIVGAGFSGAVIGRQLAEKG-HQVHIID 33 (384)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHTTT-CEEEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCC-CcEEEEE
Confidence 67789999999999999988887664 6666554
No 424
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=57.01 E-value=11 Score=33.22 Aligned_cols=29 Identities=17% Similarity=0.153 Sum_probs=23.4
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
+|.|.|.|.+|...++.+...+ .+++++.
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~ 199 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAYG-AFVVCTA 199 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CEEEEEc
Confidence 6899999999999999887665 6665554
No 425
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=56.76 E-value=9.5 Score=33.50 Aligned_cols=33 Identities=36% Similarity=0.484 Sum_probs=24.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|||+|+|.|.+|..++..+...+.+.-+.+-|.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~ 33 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 499999999999999888776653433445554
No 426
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=56.67 E-value=9.2 Score=33.96 Aligned_cols=29 Identities=14% Similarity=0.219 Sum_probs=23.0
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 025476 5 KIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~-~ivain 34 (252)
+|.|.|.|.+|...++.+...+ . +++++.
T Consensus 194 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 223 (373)
T 1p0f_A 194 TCAVFGLGGVGFSAIVGCKAAG-ASRIIGVG 223 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 7899999999999888876665 5 566654
No 427
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=56.50 E-value=12 Score=33.05 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=26.1
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
++|.|-| .|.||+.+++.+.+.+..+++++..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCceEEEEEC
Confidence 5899999 7999999999998875367776643
No 428
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=56.01 E-value=12 Score=33.18 Aligned_cols=31 Identities=26% Similarity=0.245 Sum_probs=23.6
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCC-ceEEEE
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDD-VELVAV 33 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~-~~ivai 33 (252)
.+||+|.| .|.+|..++..+.+.+. .+++.+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~ 40 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLY 40 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 47999999 89999999888876652 344443
No 429
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=55.95 E-value=9.4 Score=34.34 Aligned_cols=38 Identities=16% Similarity=0.130 Sum_probs=28.0
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
.+++|+|.|.+|+.+++++.....++-+.|.|. +++..
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r--~~~~a 167 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT--DPLAT 167 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS--SHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC--CHHHH
Confidence 589999999999999998754333666677776 44443
No 430
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=55.89 E-value=3.5 Score=36.10 Aligned_cols=29 Identities=24% Similarity=0.331 Sum_probs=22.0
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivai 33 (252)
+|.|.|.|-+|...++.+...+.-.++++
T Consensus 163 ~VlV~GaG~vG~~aiq~ak~~G~~~vi~~ 191 (346)
T 4a2c_A 163 NVIIIGAGTIGLLAIQCAVALGAKSVTAI 191 (346)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEECCCCcchHHHHHHHHcCCcEEEEE
Confidence 68899999999999888877763333343
No 431
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=55.84 E-value=13 Score=31.45 Aligned_cols=32 Identities=19% Similarity=0.140 Sum_probs=26.2
Q ss_pred cceEEEEcCCh---------hHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGINGFGR---------IGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG~Gr---------IGr~v~r~~~~~~~~~ivaind 35 (252)
++||+|.|-|. .|+.+++++.+.+ ++++.++.
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G-~~v~~~~~ 42 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGG-IDAYPVDP 42 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT-CEEEEECT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCC-CeEEEEec
Confidence 48999999988 7889999888776 88777753
No 432
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=55.81 E-value=11 Score=31.65 Aligned_cols=31 Identities=29% Similarity=0.597 Sum_probs=26.3
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivain 34 (252)
++||.|-| .|.||+.+++.+.+++ .+++++.
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 43 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKN-VEVIPTD 43 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEEC
T ss_pred cceEEEECCCChHHHHHHHHHHhCC-CeEEecc
Confidence 46899999 8999999999998776 7777764
No 433
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=55.78 E-value=12 Score=32.03 Aligned_cols=30 Identities=17% Similarity=0.305 Sum_probs=25.4
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivain 34 (252)
++|-|-| .|.||+.+++.+.+++ .+++++.
T Consensus 10 ~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~~ 40 (338)
T 2rh8_A 10 KTACVVGGTGFVASLLVKLLLQKG-YAVNTTV 40 (338)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCchHHHHHHHHHHHHCC-CEEEEEE
Confidence 6899999 8999999999998876 6776643
No 434
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=55.70 E-value=13 Score=32.60 Aligned_cols=30 Identities=30% Similarity=0.450 Sum_probs=22.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCC-CceEEEE
Q 025476 4 VKIGINGFGRIGRLVARVILQRD-DVELVAV 33 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~-~~~ivai 33 (252)
|||+|+|.|.+|..++..+...+ ..+++.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~ 31 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLL 31 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 49999999999999888876643 3554444
No 435
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=55.58 E-value=13 Score=32.34 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=25.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
++|-|-| .|.||+.+++.+.+++ .+++++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 7999999999998876 67776643
No 436
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=55.55 E-value=11 Score=33.36 Aligned_cols=34 Identities=24% Similarity=0.228 Sum_probs=25.4
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.+||+|+|.|.+|..++..+...+.+.-+.+-|.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 3799999999999988877766554444455565
No 437
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=55.42 E-value=12 Score=33.19 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=26.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~ 37 (252)
-+++|+|.|.+|+.+++++.+...++-+.|.|..
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~ 155 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY 155 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc
Confidence 4799999999999999998763226666777764
No 438
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=54.86 E-value=12 Score=33.24 Aligned_cols=22 Identities=27% Similarity=0.536 Sum_probs=19.1
Q ss_pred ceEEEEc-CChhHHHHHHHHHcC
Q 025476 4 VKIGING-FGRIGRLVARVILQR 25 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~ 25 (252)
|||+|+| .|.+|..++..+..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~ 23 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ 23 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 4999999 899999998887654
No 439
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=54.82 E-value=11 Score=32.69 Aligned_cols=32 Identities=34% Similarity=0.513 Sum_probs=26.1
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|||.|-| .|.||+.+++.+.+.++.+++++..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 3799999 7999999999998764577777653
No 440
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=54.67 E-value=9.9 Score=32.71 Aligned_cols=33 Identities=18% Similarity=0.415 Sum_probs=25.6
Q ss_pred CcceEEEEc-CChhHHHHHHHHHcCCC------ceEEEEe
Q 025476 2 GKVKIGING-FGRIGRLVARVILQRDD------VELVAVN 34 (252)
Q Consensus 2 ~~~kv~InG-~GrIGr~v~r~~~~~~~------~~ivain 34 (252)
+.++|.|-| .|.||+.+++.+.+++. .+++++.
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~ 52 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID 52 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEE
Confidence 347899999 89999999999987752 4555553
No 441
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=54.61 E-value=6 Score=34.55 Aligned_cols=30 Identities=13% Similarity=0.290 Sum_probs=24.9
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 5 kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+|.|.| .|.||...++.+...+ .+++++..
T Consensus 151 ~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 181 (334)
T 3qwb_A 151 YVLLFAAAGGVGLILNQLLKMKG-AHTIAVAS 181 (334)
T ss_dssp EEEESSTTBHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 689999 8999999999887776 68777754
No 442
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=53.63 E-value=15 Score=32.30 Aligned_cols=30 Identities=20% Similarity=0.111 Sum_probs=26.5
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
-||+|.|-|..|+.+++++.+.+ +++++++
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G-~~vv~vd 31 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAG-MKVVLVD 31 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 39999999999999999888776 9988885
No 443
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=53.19 E-value=15 Score=32.07 Aligned_cols=24 Identities=29% Similarity=0.412 Sum_probs=20.5
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDD 27 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~ 27 (252)
|||+|.| .|.+|..++..+...+.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~ 25 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI 25 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC
Confidence 4999999 99999999888876653
No 444
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=53.15 E-value=13 Score=33.12 Aligned_cols=35 Identities=20% Similarity=0.132 Sum_probs=28.4
Q ss_pred CC-cceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 1 m~-~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|| ..||.|.|-|.++..++|++.+.+ +++++++.+
T Consensus 4 m~~~~~ilI~g~g~~~~~~~~a~~~~G-~~~v~v~~~ 39 (403)
T 4dim_A 4 MYDNKRLLILGAGRGQLGLYKAAKELG-IHTIAGTMP 39 (403)
T ss_dssp --CCCEEEEECCCGGGHHHHHHHHHHT-CEEEEEECS
T ss_pred ccCCCEEEEECCcHhHHHHHHHHHHCC-CEEEEEcCC
Confidence 44 479999999999999999998776 888888654
No 445
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=53.10 E-value=4.1 Score=35.77 Aligned_cols=30 Identities=20% Similarity=0.338 Sum_probs=24.9
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+|.|.|.|.+|...++.+...+ .+++++..
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~ 198 (340)
T 3s2e_A 169 WVVISGIGGLGHVAVQYARAMG-LRVAAVDI 198 (340)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CeEEEEeC
Confidence 6889999999999999887776 68777743
No 446
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=53.08 E-value=34 Score=31.28 Aligned_cols=30 Identities=20% Similarity=0.306 Sum_probs=24.5
Q ss_pred eEEEEcC-ChhHHHHHHHHHcCCCceEEEEeC
Q 025476 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 5 kv~InG~-GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+|.|.|. |.+|...++.+...+ .+++++..
T Consensus 231 ~VlV~GasG~vG~~avqlak~~G-a~vi~~~~ 261 (456)
T 3krt_A 231 NVLIWGASGGLGSYATQFALAGG-ANPICVVS 261 (456)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHHcC-CeEEEEEC
Confidence 6899996 999999999887776 67777653
No 447
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=52.67 E-value=16 Score=30.27 Aligned_cols=32 Identities=19% Similarity=0.118 Sum_probs=26.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|| .+|.|+|.|..|-..+..+.+.+ ++++.+.
T Consensus 1 m~-~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie 32 (297)
T 3fbs_A 1 MK-FDVIIIGGSYAGLSAALQLGRAR-KNILLVD 32 (297)
T ss_dssp CC-EEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CC-CCEEEECCCHHHHHHHHHHHhCC-CCEEEEe
Confidence 55 79999999999999998887775 6766665
No 448
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=52.47 E-value=13 Score=31.69 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=27.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|++.+|.|+|.|..|...+..+.+.+ ++++.+.
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~g-~~v~vie 33 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRSG-LSYVILD 33 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHSS-CCEEEEC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCC-CCEEEEE
Confidence 66679999999999999999888775 7766664
No 449
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=52.43 E-value=6.6 Score=35.18 Aligned_cols=138 Identities=12% Similarity=0.162 Sum_probs=68.0
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCe---eEEEEee
Q 025476 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK---PVTVFGV 81 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~---~i~v~~~ 81 (252)
+|.|.|.|.+|...++.+...+-.+++++.. +.+.+.++-+ +|- + . .++-+ .-.+.
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~----lGa----------~-~-vi~~~~~~~~~~~-- 256 (380)
T 1vj0_A 198 TVVIQGAGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEE----IGA----------D-L-TLNRRETSVEERR-- 256 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHH----TTC----------S-E-EEETTTSCHHHHH--
T ss_pred EEEEECcCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHH----cCC----------c-E-EEeccccCcchHH--
Confidence 6899999999999999887665247777653 2333322221 221 0 0 01100 00000
Q ss_pred cCCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCCCEEEEcCCCC-CCCeEEeecCccc--cCCCCCeEEcCCchhhh
Q 025476 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENE--YKPELNIVSNASCTTNC 158 (252)
Q Consensus 82 ~dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~GakkViis~ps~-d~p~vV~gVN~~~--~~~~~~IIS~asCtT~~ 158 (252)
+...++. +..++|+||||+|.....+.+-..++.|-+ ++.-+... ..+. .++... +.++..++..-..+...
T Consensus 257 ~~v~~~~-~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~-iv~~G~~~~~~~~---~~~~~~~~~~~~~~i~g~~~~~~~~ 331 (380)
T 1vj0_A 257 KAIMDIT-HGRGADFILEATGDSRALLEGSELLRRGGF-YSVAGVAVPQDPV---PFKVYEWLVLKNATFKGIWVSDTSH 331 (380)
T ss_dssp HHHHHHT-TTSCEEEEEECSSCTTHHHHHHHHEEEEEE-EEECCCCSCCCCE---EECHHHHTTTTTCEEEECCCCCHHH
T ss_pred HHHHHHh-CCCCCcEEEECCCCHHHHHHHHHHHhcCCE-EEEEecCCCCCCe---eEchHHHHHhCCeEEEEeecCCHHH
Confidence 0000000 113799999999975555666667765542 33323221 2121 223222 33344555543334455
Q ss_pred HHHHHHHHHh
Q 025476 159 LAPLAKVIHD 168 (252)
Q Consensus 159 Lap~lk~L~~ 168 (252)
+.-+++.+.+
T Consensus 332 ~~~~~~l~~~ 341 (380)
T 1vj0_A 332 FVKTVSITSR 341 (380)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 6666666665
No 450
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=52.41 E-value=15 Score=32.27 Aligned_cols=30 Identities=20% Similarity=0.286 Sum_probs=26.0
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivain 34 (252)
++|.|-| .|.||+.+++.+.+++ .+++++.
T Consensus 12 ~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~~ 42 (404)
T 1i24_A 12 SRVMVIGGDGYCGWATALHLSKKN-YEVCIVD 42 (404)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CeEEEeCCCcHHHHHHHHHHHhCC-CeEEEEE
Confidence 6899999 8999999999998876 7777764
No 451
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=51.92 E-value=14 Score=32.53 Aligned_cols=31 Identities=19% Similarity=0.317 Sum_probs=26.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.||+|.|-|..|+.+++++.+.+ ++++.++.
T Consensus 2 ~~Ililg~g~~~~~~~~a~~~~G-~~v~~~~~ 32 (365)
T 2z04_A 2 LTVGILGGGQLGWMTILEGRKLG-FKFHVLED 32 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 48999999999999999998775 88777753
No 452
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=51.89 E-value=16 Score=32.05 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=24.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 33 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDL 33 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 499999999999988887766653444455555
No 453
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=51.62 E-value=13 Score=31.94 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=25.6
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.++|.|-| .|.||+.+++.+.+++ .+++++..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 51 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG-RTVRGFDL 51 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 36899999 7999999999998886 77776643
No 454
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=51.53 E-value=16 Score=30.91 Aligned_cols=31 Identities=23% Similarity=0.522 Sum_probs=25.5
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|||-|-| .|.||+.+++.+.+++ .+++++..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG-LEVAVLDN 32 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEECC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC-CEEEEEEC
Confidence 3899999 7999999999998876 77776643
No 455
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=51.44 E-value=17 Score=34.26 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=26.0
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.++.|.|+|++|+.+++.+.+.+ .+++.|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g-~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKP-VPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 47899999999999999998775 77777754
No 456
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=51.38 E-value=15 Score=34.25 Aligned_cols=31 Identities=26% Similarity=0.403 Sum_probs=26.2
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
.++++++|+|.+|..++..+.+.+ ++++..+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G-~~V~~~D 38 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG-HEVVCVD 38 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 479999999999999999888776 7776664
No 457
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=51.38 E-value=18 Score=30.60 Aligned_cols=31 Identities=19% Similarity=0.344 Sum_probs=24.4
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCc-eEEEEeC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVND 35 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~-~ivaind 35 (252)
.+|.|+|.|.+|..+++.+...+ + +++.++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~G-v~~i~lvD~ 63 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAG-VGNLTLLDF 63 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEECC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcC-CCeEEEEcC
Confidence 58999999999999999997765 5 4444443
No 458
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=51.27 E-value=13 Score=31.97 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=22.8
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCC-ceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDD-VELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~-~~ivain 34 (252)
||++||.|.|.|.. ..++|.+.+..+ +++++++
T Consensus 2 m~~~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d 35 (331)
T 2pn1_A 2 MQKPHLLITSAGRR-AKLVEYFVKEFKTGRVSTAD 35 (331)
T ss_dssp TTCCEEEEESCTTC-HHHHHHHHHHCCSSEEEEEE
T ss_pred CccceEEEecCCch-HHHHHHHHHhcCCCEEEEEe
Confidence 78899999998854 345566654433 7777774
No 459
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=51.25 E-value=16 Score=31.57 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=27.2
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCc-eEEEEeC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDV-ELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~-~ivaind 35 (252)
|+..+|.|+|.|..|-..++.+.+.+ . +++.+..
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g-~~~v~lie~ 36 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFG-ITDVIILEK 36 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEECS
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcC-CCcEEEEec
Confidence 55679999999999999999887765 5 6666643
No 460
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=50.95 E-value=10 Score=37.41 Aligned_cols=31 Identities=16% Similarity=0.193 Sum_probs=25.1
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.||+|+|.|.+|..++..+...+ ++++.. |.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG-~~V~l~-D~ 345 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKG-TPILMK-DI 345 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTT-CCEEEE-CS
T ss_pred CEEEEECCChhhHHHHHHHHhCC-CEEEEE-EC
Confidence 58999999999999999888776 675544 44
No 461
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=50.85 E-value=15 Score=32.23 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=23.6
Q ss_pred ceEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~-GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
|||+|.|. |.+|..++..+...+-..-+.+-|.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di 34 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI 34 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeC
Confidence 49999997 9999999888876653233344444
No 462
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=50.28 E-value=19 Score=29.21 Aligned_cols=30 Identities=17% Similarity=0.382 Sum_probs=24.9
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 5 kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
++-|-| .|.||+.+++.+.+++ .+++++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~r 33 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG-HTVIGIDR 33 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 789999 7999999999998876 67766643
No 463
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=50.20 E-value=5.1 Score=34.91 Aligned_cols=30 Identities=17% Similarity=0.207 Sum_probs=24.4
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 5 kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+|.|.| .|.||...++.+...+ .+++++..
T Consensus 143 ~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 173 (325)
T 3jyn_A 143 IILFHAAAGGVGSLACQWAKALG-AKLIGTVS 173 (325)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred EEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 688999 8999999998887666 67777653
No 464
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=49.88 E-value=9.4 Score=33.56 Aligned_cols=30 Identities=20% Similarity=0.317 Sum_probs=24.9
Q ss_pred eEEEEcC-ChhHHHHHHHHHcCCCceEEEEeC
Q 025476 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 5 kv~InG~-GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+|.|.|. |.||...++.+...+ .+++++..
T Consensus 162 ~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~ 192 (342)
T 4eye_A 162 TVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVN 192 (342)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHHcC-CEEEEEeC
Confidence 6899995 999999999887776 68777754
No 465
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=49.87 E-value=21 Score=31.01 Aligned_cols=32 Identities=16% Similarity=0.258 Sum_probs=26.7
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+..|.|+|.|-+|...+..+.+++ .+++.+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G-~~V~vle~ 37 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKG-YSVHILAR 37 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC-CEEEEEec
Confidence 468999999999999999888775 78777753
No 466
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=49.83 E-value=18 Score=32.68 Aligned_cols=31 Identities=35% Similarity=0.424 Sum_probs=26.7
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
+||.|.|.|.+|+.+++++.+.+ +++++++.
T Consensus 20 ~~ili~g~g~~g~~~~~a~~~~G-~~v~~v~~ 50 (433)
T 2dwc_A 20 QKILLLGSGELGKEIAIEAQRLG-VEVVAVDR 50 (433)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 59999999999999999998765 88877764
No 467
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=49.79 E-value=14 Score=29.74 Aligned_cols=33 Identities=21% Similarity=0.086 Sum_probs=23.0
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|+.|+.|.|.|--||.++..+...+ +++++.-|
T Consensus 2 ~m~~~~I~Gagg~gk~v~~~~~~~~-~~v~~f~D 34 (194)
T 3bfp_A 2 RTEKIYIYGASGHGLVCEDVAKNMG-YKECIFLD 34 (194)
T ss_dssp CCSEEEEEC--CHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CCccEEEEeCCHHHHHHHHHHHhCC-CeEEEEEe
Confidence 3358999999999999999875544 66666554
No 468
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=49.72 E-value=13 Score=31.11 Aligned_cols=30 Identities=23% Similarity=0.344 Sum_probs=24.8
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|||.|.| .|.||+.+++.+. ++ .+++++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r 31 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV-GNLIALDV 31 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT-SEEEEECT
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC-CeEEEecc
Confidence 3899999 7999999999988 54 78777753
No 469
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=49.30 E-value=20 Score=31.70 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=27.1
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.+||.|.|-|..|+.+++++.+.+ ++++.++.
T Consensus 11 ~~~ili~g~g~~~~~~~~a~~~~G-~~v~~~~~ 42 (391)
T 1kjq_A 11 ATRVMLLGSGELGKEVAIECQRLG-VEVIAVDR 42 (391)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTTT-CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CEEEEEEC
Confidence 379999999999999999998776 78777754
No 470
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=49.07 E-value=18 Score=31.62 Aligned_cols=24 Identities=29% Similarity=0.448 Sum_probs=20.5
Q ss_pred ceEEEEcC-ChhHHHHHHHHHcCCC
Q 025476 4 VKIGINGF-GRIGRLVARVILQRDD 27 (252)
Q Consensus 4 ~kv~InG~-GrIGr~v~r~~~~~~~ 27 (252)
|||.|.|. |.+|..++..+...+.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~ 25 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF 25 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC
Confidence 49999997 9999999998877653
No 471
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=48.72 E-value=14 Score=34.52 Aligned_cols=36 Identities=17% Similarity=0.238 Sum_probs=26.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ 43 (252)
-+|+|+|+|.+|-.++-.+.+.+ ++++++ |. +.+.+
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G-~~V~g~-Di--d~~kV 57 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLG-HRVVGY-DV--NPSIV 57 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEE-CS--CHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCC-CcEEEE-EC--CHHHH
Confidence 58999999999987776666555 887776 33 55544
No 472
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=48.39 E-value=13 Score=31.18 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=24.7
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCCceEEEE
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAV 33 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~~~ivai 33 (252)
|+..+|-|-| .|.||+.+++.+.+++ .+++.+
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~ 33 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMA-EILRLA 33 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGE-EEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcC-CEEEEE
Confidence 5545788999 8999999999988775 555444
No 473
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=48.34 E-value=16 Score=31.00 Aligned_cols=31 Identities=23% Similarity=0.262 Sum_probs=25.5
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
+..|.|+|-|..|-..+..|.+.+ ++++.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G-~~V~vlE 32 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAG-HQVHLFD 32 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CceEEEECCcHHHHHHHHHHHHCC-CcEEEEE
Confidence 369999999999999999887775 7766554
No 474
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=48.31 E-value=15 Score=32.74 Aligned_cols=33 Identities=24% Similarity=0.264 Sum_probs=26.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
||+|||++.|....+..+++++.+.+ .++++|-
T Consensus 20 ~~~mrIvf~G~~~fa~~~L~~L~~~~-~~i~~Vv 52 (329)
T 2bw0_A 20 FQSMKIAVIGQSLFGQEVYCHLRKEG-HEVVGVF 52 (329)
T ss_dssp -CCCEEEEECCHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHCC-CeEEEEE
Confidence 56799999998888887889888775 7887775
No 475
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=48.07 E-value=21 Score=31.60 Aligned_cols=31 Identities=19% Similarity=0.399 Sum_probs=25.5
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
+.+|.|+|.|..|...+..+...+ ++++.+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G-~~v~v~E 56 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNG-IDVSVYE 56 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT-CEEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC-CCEEEEe
Confidence 469999999999999988887665 7776664
No 476
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=48.02 E-value=19 Score=29.55 Aligned_cols=34 Identities=24% Similarity=0.221 Sum_probs=26.9
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
||+.+|.|+|-|..|-..+..+.+.+ .+++.|..
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g-~~v~lie~ 34 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKG-VRVGLLTQ 34 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEec
Confidence 77789999999999999988887765 66666643
No 477
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=47.75 E-value=31 Score=31.99 Aligned_cols=92 Identities=16% Similarity=0.130 Sum_probs=52.6
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEE-eec
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF-GVR 82 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~-~~~ 82 (252)
.+|.|+|.|++|..-++.+.+.+ .+++.+. +....+ +..+. +.+ .+ .+. .+-
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~-~~~~~~-~~~l~----------------~~~-~i-------~~~~~~~ 65 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG-ARLTVNA-LTFIPQ-FTVWA----------------NEG-ML-------TLVEGPF 65 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BEEEEEE-SSCCHH-HHHHH----------------TTT-SC-------EEEESSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEc-CCCCHH-HHHHH----------------hcC-CE-------EEEECCC
Confidence 68999999999999999998876 6655554 422221 11111 001 11 111 111
Q ss_pred CCCCCCCcccCccEEEecCCCC-CCHHhHHHHHhCCCCEEEEcCC
Q 025476 83 NPEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAKKVIISAP 126 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f-~~~~~a~~h~~~GakkViis~p 126 (252)
++++++ +.|+|+=|||.- ....-+....+.|..--+++.|
T Consensus 66 ~~~~l~----~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 66 DETLLD----SCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp CGGGGT----TCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCT
T ss_pred CccccC----CccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCc
Confidence 233332 789999999976 3444455555677732235555
No 478
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=47.70 E-value=21 Score=28.06 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=24.7
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
||+-|-| .|.||+.+++.+. ++ .+++.+..
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g-~~V~~~~r 34 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KK-AEVITAGR 34 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TT-SEEEEEES
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CC-CeEEEEec
Confidence 5899999 8999999999988 65 77766643
No 479
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=47.69 E-value=19 Score=30.78 Aligned_cols=30 Identities=20% Similarity=0.439 Sum_probs=25.2
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|+|-|-| .|.||+.+++.+.+++ .+++++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILD 31 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 3889999 7999999999998876 7777664
No 480
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=47.46 E-value=21 Score=30.24 Aligned_cols=31 Identities=23% Similarity=0.464 Sum_probs=26.1
Q ss_pred ceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
++|-|-| .|.||+.+++.+.+++ .+++++..
T Consensus 13 ~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 44 (321)
T 2pk3_A 13 MRALITGVAGFVGKYLANHLTEQN-VEVFGTSR 44 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred ceEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 6899999 8999999999998876 67777653
No 481
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=47.46 E-value=17 Score=31.64 Aligned_cols=34 Identities=26% Similarity=0.359 Sum_probs=26.7
Q ss_pred CC--cceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 1 MG--KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 1 m~--~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|| +.+|.|+|.|.+|...+..+.+++ .+++.+..
T Consensus 1 Mm~~~~dVvIIGgGi~Gl~~A~~La~~G-~~V~lle~ 36 (382)
T 1y56_B 1 MLPEKSEIVVIGGGIVGVTIAHELAKRG-EEVTVIEK 36 (382)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCC-CeEEEEeC
Confidence 66 368999999999999999988875 67666643
No 482
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=47.38 E-value=18 Score=34.77 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=27.4
Q ss_pred cceEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 3 ~~kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
.++|.|-| .|.||+.+++.+.+.++.+++++..
T Consensus 315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r 348 (660)
T 1z7e_A 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 348 (660)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEES
T ss_pred CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEc
Confidence 46899999 8999999999998874478777754
No 483
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=47.30 E-value=20 Score=31.19 Aligned_cols=30 Identities=20% Similarity=0.156 Sum_probs=24.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~-~ivain 34 (252)
.++.|.|.|.+|+.+++++.+.+ + +++..|
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G-~~~V~v~n 172 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTA-AERIDMAN 172 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CSEEEEEC
T ss_pred CEEEEECcHHHHHHHHHHHHHCC-CCEEEEEe
Confidence 58999999999999999998776 5 655554
No 484
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=47.07 E-value=20 Score=32.03 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=25.0
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
-+|.|.|.|.+|+.+++.+...+ .++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~G-a~V~v~d 197 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLG-AQVQIFD 197 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 48999999999999999998777 5766554
No 485
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=46.78 E-value=63 Score=29.21 Aligned_cols=29 Identities=24% Similarity=0.192 Sum_probs=23.9
Q ss_pred eEEEEcC-ChhHHHHHHHHHcCCCceEEEEe
Q 025476 5 KIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 5 kv~InG~-GrIGr~v~r~~~~~~~~~ivain 34 (252)
+|.|.|. |-||...++.+...+ .+++++.
T Consensus 223 ~VlV~GasG~iG~~a~qla~~~G-a~vi~~~ 252 (447)
T 4a0s_A 223 IVLIWGASGGLGSYAIQFVKNGG-GIPVAVV 252 (447)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 6899996 999999999887776 6777665
No 486
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=46.66 E-value=23 Score=28.88 Aligned_cols=32 Identities=19% Similarity=0.157 Sum_probs=27.2
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
.|+.|+|.|--|+.+++.+.+. +++++++-|.
T Consensus 13 k~v~IiGAGg~g~~v~~~l~~~-~~~~vgfiDd 44 (220)
T 4ea9_A 13 GGVVIIGGGGHAKVVIESLRAC-GETVAAIVDA 44 (220)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEECS
T ss_pred CCEEEEcCCHHHHHHHHHHHhC-CCEEEEEEeC
Confidence 4899999999999999998774 4888888764
No 487
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=46.62 E-value=21 Score=31.72 Aligned_cols=34 Identities=21% Similarity=0.292 Sum_probs=27.6
Q ss_pred CC-cceEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 025476 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 1 m~-~~kv~InG~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
|| .|||...|+...+...++++.+.+ .++++|-.
T Consensus 4 m~~~mrivf~Gt~~fa~~~L~~L~~~~-~~v~~Vvt 38 (318)
T 3q0i_A 4 MSQSLRIVFAGTPDFAARHLAALLSSE-HEIIAVYT 38 (318)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTSS-SEEEEEEC
T ss_pred cccCCEEEEEecCHHHHHHHHHHHHCC-CcEEEEEc
Confidence 55 689999999999999999998875 88887743
No 488
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=46.34 E-value=23 Score=31.38 Aligned_cols=32 Identities=16% Similarity=0.134 Sum_probs=26.0
Q ss_pred CcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 2 ~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
+..+|.|+|.|..|-..+..|...+ ++++.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G-~~v~v~E 35 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAG-VDVDVYE 35 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCC-CCEEEEe
Confidence 3579999999999999988887765 7766664
No 489
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=45.89 E-value=17 Score=34.41 Aligned_cols=42 Identities=17% Similarity=0.187 Sum_probs=31.7
Q ss_pred ceEEEEc-CChhHHHHHHHHHc---C-CCceEEEEeCCCCChhhhhee
Q 025476 4 VKIGING-FGRIGRLVARVILQ---R-DDVELVAVNDPFITTDYMTYM 46 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~~---~-~~~~ivaind~~~~~~~~ayl 46 (252)
.+|.|.| +|-||.+.+..+.+ . +.|+++++.- ..+.+.++..
T Consensus 78 k~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaA-g~Nv~lL~eQ 124 (488)
T 3au8_A 78 INVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYV-NKSVNELYEQ 124 (488)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEE-SSCHHHHHHH
T ss_pred eEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEc-CCCHHHHHHH
Confidence 4799999 89999999998866 3 3599999875 2355555433
No 490
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=45.85 E-value=29 Score=30.11 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=26.8
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
-++.|.|.|.+||.+++++.+.+ .+++.+|-.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 37999999999999999998887 777666653
No 491
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=45.77 E-value=24 Score=30.94 Aligned_cols=31 Identities=26% Similarity=0.488 Sum_probs=26.2
Q ss_pred ceEEEEc-CChhHHHHHHHHH-cCCCceEEEEeC
Q 025476 4 VKIGING-FGRIGRLVARVIL-QRDDVELVAVND 35 (252)
Q Consensus 4 ~kv~InG-~GrIGr~v~r~~~-~~~~~~ivaind 35 (252)
|+|-|-| .|.||+.+++.+. +.+ .+++++..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g-~~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN-HSVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC-CEEEEEec
Confidence 5899999 7999999999998 776 77777653
No 492
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=45.40 E-value=20 Score=31.95 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=25.8
Q ss_pred CC-cceEEEEcCChhHHHHHHHHHcCCCce-EEEEe
Q 025476 1 MG-KVKIGINGFGRIGRLVARVILQRDDVE-LVAVN 34 (252)
Q Consensus 1 m~-~~kv~InG~GrIGr~v~r~~~~~~~~~-ivain 34 (252)
|| ..+|.|+|.|..|-..+..+...+ ++ ++.+.
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G-~~~v~v~E 35 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAG-IGKVTLLE 35 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCC-CCeEEEEE
Confidence 55 579999999999999988887765 77 66664
No 493
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=45.36 E-value=49 Score=30.78 Aligned_cols=83 Identities=19% Similarity=0.218 Sum_probs=48.9
Q ss_pred ceEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCChhhhheeeeeecccccCCCcceEEcCCeeeEECCeeEEEEeec
Q 025476 4 VKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (252)
Q Consensus 4 ~kv~InG~GrIGr~-v~r~~~~~~~~~ivaind~~~~~~~~ayll~ydS~~G~~~~~~v~~~~~~~l~i~G~~i~v~~~~ 82 (252)
.||-++|.|.+|.. +++.+.+++ .++ .+.|...+ .....| +.. | ++++...
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G-~~V-~~~D~~~~-~~~~~l---------------~~~--------g--i~~~~g~ 74 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG-YQI-SGSDLAPN-SVTQHL---------------TAL--------G--AQIYFHH 74 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT-CEE-EEECSSCC-HHHHHH---------------HHT--------T--CEEESSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC-CeE-EEEECCCC-HHHHHH---------------HHC--------C--CEEECCC
Confidence 48999999999996 789888887 654 45554211 111111 001 1 1222224
Q ss_pred CCCCCCCcccCccEEEecCCCCCCHHhHHHHHhCCC
Q 025476 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (252)
Q Consensus 83 dp~~~~w~~~~vdiV~e~tg~f~~~~~a~~h~~~Ga 118 (252)
++++++ ++|+|+=+.|.-.+........+.|.
T Consensus 75 ~~~~~~----~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 75 RPENVL----DASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CGGGGT----TCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CHHHcC----CCCEEEECCCCCCCCHHHHHHHHCCC
Confidence 555442 68999999887665554555555565
No 494
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=44.92 E-value=22 Score=29.77 Aligned_cols=31 Identities=19% Similarity=0.407 Sum_probs=25.0
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 025476 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (252)
Q Consensus 5 kv~InG-~GrIGr~v~r~~~~~~~~~ivaind 35 (252)
||.|.| .|.||+.+++.+.+++..+++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEcc
Confidence 578999 7999999999998876467776654
No 495
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=44.37 E-value=14 Score=33.61 Aligned_cols=32 Identities=31% Similarity=0.266 Sum_probs=27.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
|| -||.|.|-|.+|+.+++++.+.+ ++++++.
T Consensus 1 m~-k~ilI~g~g~~~~~~~~a~~~~G-~~vv~v~ 32 (449)
T 2w70_A 1 ML-DKIVIANRGEIALRILRACKELG-IKTVAVH 32 (449)
T ss_dssp CC-SEEEECCCHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CC-ceEEEeCCcHHHHHHHHHHHHcC-CeEEEEe
Confidence 66 59999999999999999998776 8888875
No 496
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=44.21 E-value=20 Score=31.41 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=24.3
Q ss_pred ceEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 025476 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (252)
Q Consensus 4 ~kv~InG~GrIGr~v~r~~~~~~~~~ivaind~ 36 (252)
+||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di 47 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDL 47 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 699999999999988887766553333455555
No 497
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=44.10 E-value=21 Score=30.50 Aligned_cols=30 Identities=30% Similarity=0.393 Sum_probs=24.4
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCc-eEEEEeC
Q 025476 5 KIGINGFGRIGRLVARVILQRDDV-ELVAVND 35 (252)
Q Consensus 5 kv~InG~GrIGr~v~r~~~~~~~~-~ivaind 35 (252)
+++|+|.|.+|+.+++.+.+.+ + +++..|-
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G-~~~I~v~nR 140 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMG-VKDIWVVNR 140 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT-CCCEEEEES
T ss_pred eEEEECcHHHHHHHHHHHHHcC-CCEEEEEeC
Confidence 7999999999999999998776 5 5555543
No 498
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=44.05 E-value=26 Score=31.67 Aligned_cols=31 Identities=26% Similarity=0.381 Sum_probs=25.8
Q ss_pred cceEEEEcCChhHHHHHHHHHcCCCc--eEEEEe
Q 025476 3 KVKIGINGFGRIGRLVARVILQRDDV--ELVAVN 34 (252)
Q Consensus 3 ~~kv~InG~GrIGr~v~r~~~~~~~~--~ivain 34 (252)
..+|+|+|.|..|-..++.+.+.+ . +++.+.
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G-~~~~V~v~E 38 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEK-AFDQVTLFE 38 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT-CCSEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHhcC-CCCCeEEEe
Confidence 469999999999999999988776 5 766664
No 499
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=44.01 E-value=24 Score=31.79 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=20.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 025476 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (252)
Q Consensus 1 m~~~kv~InG~GrIGr~v~r~~~~~~~~~ivain 34 (252)
||.+||+|+|-|-....+++.+.++.+ ++++++
T Consensus 13 ~~~~~vlviG~Ggr~~a~a~~~a~~~g-~v~~~~ 45 (412)
T 1vkz_A 13 MKAVRVHILGSGGREHAIGWAFAKQGY-EVHFYP 45 (412)
T ss_dssp ---CEEEEEECSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cccCEEEEECCCHHHHHHHHHHHhCCC-CEEEEC
Confidence 778999999999333344455555666 887774
No 500
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=43.71 E-value=29 Score=27.96 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=27.0
Q ss_pred CCcceEEEEc-CChhHHHHHHHHHcCCC-ceEEEEeC
Q 025476 1 MGKVKIGING-FGRIGRLVARVILQRDD-VELVAVND 35 (252)
Q Consensus 1 m~~~kv~InG-~GrIGr~v~r~~~~~~~-~~ivaind 35 (252)
|+..++-|-| .|-||+.+++.+.+++. .+++.+..
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r 37 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR 37 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEec
Confidence 5556788999 89999999999988763 56666543
Done!