Query 025478
Match_columns 252
No_of_seqs 158 out of 1369
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 11:08:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025478.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025478hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s57_A Alpha-ketoglutarate-dep 100.0 1.6E-47 5.6E-52 325.5 18.1 189 39-251 12-203 (204)
2 2iuw_A Alkylated repair protei 100.0 1.3E-44 4.3E-49 314.5 19.1 211 16-251 16-230 (238)
3 3i3q_A Alpha-ketoglutarate-dep 100.0 5E-37 1.7E-41 261.8 15.4 182 32-251 4-203 (211)
4 3tht_A Alkylated DNA repair pr 100.0 8.9E-37 3E-41 277.5 15.7 181 29-251 105-313 (345)
5 3lfm_A Protein FTO; FAT MASS a 99.8 2.1E-19 7.1E-24 164.3 14.5 188 43-250 44-314 (495)
6 3dkq_A PKHD-type hydroxylase S 97.0 0.004 1.4E-07 53.4 9.8 156 33-247 15-191 (243)
7 2jig_A Prolyl-4 hydroxylase; h 96.6 0.053 1.8E-06 45.3 14.1 177 27-247 12-213 (224)
8 3itq_A Prolyl 4-hydroxylase, a 96.2 0.04 1.4E-06 46.3 10.7 173 15-247 17-208 (216)
9 2hbt_A EGL nine homolog 1; pro 95.3 1.1 3.6E-05 38.1 16.2 36 207-247 174-209 (247)
10 3kt7_A PKHD-type hydroxylase T 91.3 4.2 0.00014 39.1 14.0 30 39-68 36-65 (633)
11 2rg4_A Uncharacterized protein 90.9 0.95 3.2E-05 37.6 8.3 99 134-248 103-204 (216)
12 4diq_A Lysine-specific demethy 74.6 20 0.00067 33.5 10.2 113 115-248 147-262 (489)
13 1odm_A Isopenicillin N synthas 73.2 12 0.0004 32.8 8.1 39 207-248 239-285 (331)
14 2xdv_A MYC-induced nuclear ant 69.9 30 0.001 31.7 10.3 113 114-249 121-235 (442)
15 4gjz_A Lysine-specific demethy 56.1 11 0.00037 30.4 4.1 35 206-248 199-233 (235)
16 1dcs_A Deacetoxycephalosporin 55.2 23 0.00077 30.7 6.2 43 207-249 212-265 (311)
17 3on7_A Oxidoreductase, iron/as 54.9 16 0.00054 31.2 5.1 42 207-248 200-251 (280)
18 3oox_A Putative 2OG-Fe(II) oxy 48.2 26 0.00089 30.3 5.5 42 207-248 217-268 (312)
19 1gp6_A Leucoanthocyanidin diox 47.4 45 0.0015 29.4 7.0 42 207-248 257-304 (356)
20 3rcq_A Aspartyl/asparaginyl be 45.9 49 0.0017 26.9 6.5 92 115-248 84-180 (197)
21 1e5r_A Proline oxidase; oxidor 44.8 51 0.0018 28.5 6.7 95 114-248 75-174 (290)
22 1w9y_A 1-aminocyclopropane-1-c 39.3 57 0.002 28.2 6.3 42 207-248 203-250 (319)
23 2opw_A Phyhd1 protein; double- 38.3 27 0.00093 29.3 3.9 40 206-250 226-265 (291)
24 2fct_A Syringomycin biosynthes 35.3 43 0.0015 28.4 4.8 41 206-250 218-259 (313)
25 3d8c_A Hypoxia-inducible facto 31.8 44 0.0015 29.4 4.3 39 206-249 259-297 (349)
26 1vrb_A Putative asparaginyl hy 29.8 42 0.0014 29.5 3.8 37 205-248 215-252 (342)
27 2a1x_A Phytanoyl-COA dioxygena 27.5 71 0.0024 26.9 4.8 40 206-250 214-253 (308)
28 3al5_A HTYW5, JMJC domain-cont 24.0 66 0.0022 28.0 4.0 36 206-249 238-275 (338)
29 3lwc_A Uncharacterized protein 23.4 1.6E+02 0.0055 21.2 5.5 20 209-228 78-97 (119)
30 2rdq_A 1-deoxypentalenic acid 23.2 60 0.002 27.0 3.4 40 207-250 210-251 (288)
31 3gja_A CYTC3; halogenase, beta 22.5 65 0.0022 27.7 3.6 41 206-250 220-261 (319)
32 3pl0_A Uncharacterized protein 22.0 1E+02 0.0035 26.0 4.6 36 211-249 203-247 (254)
No 1
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=100.00 E-value=1.6e-47 Score=325.52 Aligned_cols=189 Identities=34% Similarity=0.566 Sum_probs=165.1
Q ss_pred EEEeCCCCCHHHHHHHHHHHHhcCCC---CCCeeeecCceEeeeeeecCCceeeeeCCCCccceeecCCCCCCCCCCCCc
Q 025478 39 VIYFPRIIKMEDSWKFFDYLNNRIPW---NRPTIRVFGRSCLQVACISTPRDTCYVASEGVTQLIYSGYRPHPYSWDDFP 115 (252)
Q Consensus 39 ~~~~p~fl~~~e~~~L~~~L~~~~~w---~~~~~~~~G~~~~~~~~~~~pR~~~~y~~~~~~~y~y~g~~~~~~~w~~~P 115 (252)
.+|+|+||++++|+.||++|.++++| ++..++||||.+.+ ||+++||++.+.. |.|+|..+.+.+|+ |
T Consensus 12 ~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~~gk~~~~------pR~~~wyg~~~~~-Y~Ysg~~~~~~pwp--~ 82 (204)
T 3s57_A 12 DSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSV------PRKQATYGDAGLT-YTFSGLTLSPKPWI--P 82 (204)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEETTEEEEC------SSEEEEEECTTCC-EEETTEEECCEECC--H
T ss_pred eEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEECCeEecc------CcEEEEECCCCCC-cccCCCcccCCCCC--H
Confidence 56789999999999999999999999 77789999999987 9999999998874 99999988888996 5
Q ss_pred hHHHHHHHHHHhcCCCCcceeeeeeecCCCCCcccCCCCCCCcCCCCcEEEEecCCeeeEEEeeCCCCCccCCCCCCchh
Q 025478 116 PLKDILDIVLKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPSKSYQDRRTDDEPV 195 (252)
Q Consensus 116 ~L~~il~~~~e~~~g~~~n~~LiN~Y~~G~d~i~~H~D~~~~~g~~~~IasvSLG~~r~f~fr~~~~~~~~~~~~~~~~~ 195 (252)
+|..+++.+ +..+|..||+||||+|++|+|+|+||+|++..++.+++|||||||++|.|.|+++..++...
T Consensus 83 ~L~~l~~~~-~~~~g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~~~~~~~~~-------- 153 (204)
T 3s57_A 83 VLERIRDHV-SGVTGQTFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSRGKSP-------- 153 (204)
T ss_dssp HHHHHHHHH-HHHHCCCCSEEEEEEESSTTCCEEEECCCCTTBCTTCCEEEEEEESCEEEEEEEGGGCSSSC--------
T ss_pred HHHHHHHHH-HHHhCCCCceeEEEEECCCCCcccceecChhhccCCCcEEEEECCCceEEEEEEcCCCcccc--------
Confidence 788877666 34558999999999999999999999999998888899999999999999999865432100
Q ss_pred hhhhhccCCCcceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEeeccc
Q 025478 196 SKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHVL 251 (252)
Q Consensus 196 ~~~~~~~~~~~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTFR~v~ 251 (252)
.......++.|++|||+||+|++|..|+|+||+.+...++|||||||+++
T Consensus 154 ------~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTFR~i~ 203 (204)
T 3s57_A 154 ------SRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKIL 203 (204)
T ss_dssp ------SCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEEECBC
T ss_pred ------ccCCceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEeeeec
Confidence 01124588999999999999999999999999988778999999999985
No 2
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=100.00 E-value=1.3e-44 Score=314.49 Aligned_cols=211 Identities=32% Similarity=0.560 Sum_probs=171.8
Q ss_pred CCCCchhhhcccceEEe--CCCC-ceEEEeCCCCCHHHHHHHHHHHHhcCCCCCCeeeecCceEeeeeeecCCceeeeeC
Q 025478 16 PDDDDEKNQKKQRMVVD--LGNG-SEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQVACISTPRDTCYVA 92 (252)
Q Consensus 16 ~~~~~~~~~~~~~~~~~--l~~g-~~~~~~p~fl~~~e~~~L~~~L~~~~~w~~~~~~~~G~~~~~~~~~~~pR~~~~y~ 92 (252)
++.-+.+..+|+..... ++.| +++.|+|+||+++|+++||+.|.++++|.+....+||+.+.+ +|+++||+
T Consensus 16 ~~~~~~~~~~~~g~~~~~~~p~~i~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~~g~~~~~------~R~~~~~g 89 (238)
T 2iuw_A 16 PRGSHMRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQ------PRLTAWYG 89 (238)
T ss_dssp ---CCEEECCSSEEEEEECCSSSCEEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEESSSCEEEC------SSEEEEEE
T ss_pred cCCCCCeeecCCcceeeecCCCCCCcEEEECCCCCHHHHHHHHHHHHHhCCCccCceecCCccccc------CCeeEEcC
Confidence 45566777777777655 4543 479999999999999999999998999999999999998877 99999999
Q ss_pred CCCccceeecCCCCCCC-CCCCCchHHHHHHHHHHhcCCCCcceeeeeeecCCCCCcccCCCCCCCcCCCCcEEEEecCC
Q 025478 93 SEGVTQLIYSGYRPHPY-SWDDFPPLKDILDIVLKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGC 171 (252)
Q Consensus 93 ~~~~~~y~y~g~~~~~~-~w~~~P~L~~il~~~~e~~~g~~~n~~LiN~Y~~G~d~i~~H~D~~~~~g~~~~IasvSLG~ 171 (252)
+ . .|.|++....+. +|+ |.|..+++++ +...+..||+||||+|++|+|+|+||+|++.+++++++||+||||+
T Consensus 90 ~--~-~Y~Ys~~~~~~~p~wp--~~l~~l~~~~-~~~~g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IaslSLG~ 163 (238)
T 2iuw_A 90 E--L-PYTYSRITMEPNPHWH--PVLRTLKNRI-EENTGHTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGA 163 (238)
T ss_dssp C--C-CTTSCHHHHCCBSSCC--HHHHHHHHHH-HHHHSCCCCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEEEEES
T ss_pred C--C-ccccCCcccCCCCCCC--HHHHHHHHHH-HHHhCCCCCEEEEEEECCCCCceeCCcCChhhcCCCCcEEEEECCC
Confidence 5 3 489988766666 685 4577766655 3345889999999999999999999999999999888999999999
Q ss_pred eeeEEEeeCCCCCccCCCCCCchhhhhhhccCCCcceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEeeccc
Q 025478 172 ERDFLLKIKPSKSYQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHVL 251 (252)
Q Consensus 172 ~r~f~fr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTFR~v~ 251 (252)
+|.|.|+++...+.. ++. .....++|.|++||||||.|++|+.|+|+|++.+...+.|||||||.+.
T Consensus 164 ~~~f~f~~~~~~~~~---~~~----------~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR~v~ 230 (238)
T 2iuw_A 164 TRTFEMRKKPPPEEN---GDY----------TYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVY 230 (238)
T ss_dssp CEEEEEEECCC---------------------CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEECCC
T ss_pred CEEEEEeccCCcccc---Ccc----------cCCceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEeeecc
Confidence 999999986542100 000 0124588999999999999999999999999977778999999999875
No 3
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=100.00 E-value=5e-37 Score=261.78 Aligned_cols=182 Identities=21% Similarity=0.313 Sum_probs=142.5
Q ss_pred eCCCCceEEEeCCCCCHHHHHHHHHHHHh---cCCCCCCeeeecCceEeeeeeecCCcee-----eeeCCCCccceeecC
Q 025478 32 DLGNGSEVIYFPRIIKMEDSWKFFDYLNN---RIPWNRPTIRVFGRSCLQVACISTPRDT-----CYVASEGVTQLIYSG 103 (252)
Q Consensus 32 ~l~~g~~~~~~p~fl~~~e~~~L~~~L~~---~~~w~~~~~~~~G~~~~~~~~~~~pR~~-----~~y~~~~~~~y~y~g 103 (252)
.|.+ ++.++|+|+. +++++|+++|++ ..|+++. .+.|....+ +|++ +||++.. .|.|+|
T Consensus 4 ~~~~--g~~~~~~~~~-~~~~~l~~~~~~~~~~~p~~~~--~~pgg~~~s------~~~~~~g~~~W~~d~~--~Y~Ys~ 70 (211)
T 3i3q_A 4 PLAA--GAVILRRFAF-NAAEQLIRDINDVASQSPFRQM--VTPGGYTMS------VAMTNCGHLGWTTHRQ--GYLYSP 70 (211)
T ss_dssp CCBT--TBEEETTTTT-TTHHHHHHHHHHHHHHSCCBCC--BCTTSCBCS------SEEEEESSBEEEEETT--EEEEES
T ss_pred ecCC--CCEEECCcCh-HHHHHHHHHHHHHHhcCCCcee--EcCCCCcCc------hhhcccccceeecCCC--CcCcCC
Confidence 3544 4889999998 577889999853 3455554 345544443 8888 8999864 599999
Q ss_pred CC-CCCCCCCCCch-HHHHHHHHHHhc--CCCCcceeeeeeecCCCCCcccCCC-CCCCcCCCCcEEEEecCCeeeEEEe
Q 025478 104 YR-PHPYSWDDFPP-LKDILDIVLKVL--PGSRFNSLLLNRYKGGNDYVGWHAD-DEKLYGSTPEIASVSFGCERDFLLK 178 (252)
Q Consensus 104 ~~-~~~~~w~~~P~-L~~il~~~~e~~--~g~~~n~~LiN~Y~~G~d~i~~H~D-~~~~~g~~~~IasvSLG~~r~f~fr 178 (252)
.. ..+.+|+++|. |..+++++.... .+..||+||||+|++|+ +|+||+| ++..++ ++|+|||||++|.|.|+
T Consensus 71 ~~~~~~~pw~~~P~~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~-~i~~H~D~~e~~~~--~pI~svSLG~~~~f~f~ 147 (211)
T 3i3q_A 71 IDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGA-KLSLHQDKDEPDLR--APIVSVSLGLPAIFQFG 147 (211)
T ss_dssp BCTTTSSBCCCCCHHHHHHHHHHHHHTTCTTCCCCEEEEEEECTTC-CEEEECCCCCSCTT--SCEEEEEEESCEEEEEC
T ss_pred CccCCCCCCCchHHHHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCC-CcccccCCCccccC--CCEEEEECCCCeEEEEe
Confidence 87 46789998885 778777664322 23467999999999999 9999999 677776 46999999999999999
Q ss_pred eCCCCCccCCCCCCchhhhhhhccCCCcceEEEcCCCcEEEEccCcccceeccccccCCC-----CCceEEEEeeccc
Q 025478 179 IKPSKSYQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKA-----ESTRINLTFRHVL 251 (252)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~-----~~~RISLTFR~v~ 251 (252)
+...++ ...++.|++|||+||.|++|. |+|+|++.+.. .+.|||||||++.
T Consensus 148 ~~~~~~---------------------~~~~i~L~~GsllvM~G~~r~-~~H~I~~~~~~~~p~~~~~RIsLTFR~~~ 203 (211)
T 3i3q_A 148 GLKRND---------------------PLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGFHPLTIDCRYNLTFRQAG 203 (211)
T ss_dssp CSSTTS---------------------CCEEEEECTTCEEEECGGGTT-CCEEECCCCCCCBTTTBTCEEEEEEECCS
T ss_pred cccCCC---------------------ceEEEECCCCCEEEECchHHc-eEeccCcccCCcCCCCCCCEEEEEeeecc
Confidence 854321 357899999999999999997 99999997653 3579999999875
No 4
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=100.00 E-value=8.9e-37 Score=277.46 Aligned_cols=181 Identities=22% Similarity=0.299 Sum_probs=125.9
Q ss_pred eEEeCCCCceEEEeCCCCCHHHHHHHHHHHHhcCCCCCCeeeecCceEeeeeeecCCceeeeeCCCCccceeecCCCCC-
Q 025478 29 MVVDLGNGSEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQVACISTPRDTCYVASEGVTQLIYSGYRPH- 107 (252)
Q Consensus 29 ~~~~l~~g~~~~~~p~fl~~~e~~~L~~~L~~~~~w~~~~~~~~G~~~~~~~~~~~pR~~~~y~~~~~~~y~y~g~~~~- 107 (252)
++..|++| +.|+|+||+++|++.|+ ++++|.+..+.++|+.... +|+++|||. .|.|++..+.
T Consensus 105 ~~~~lp~G--l~~~p~fis~~Ee~~Ll----~~i~w~~~~~~~~~~~~l~------~Rr~~~yG~----~Y~Ys~~~~~~ 168 (345)
T 3tht_A 105 RPQALPPG--LMVVEEIISSEEEKMLL----ESVDWTEDTDNQNSQKSLK------HRRVKHFGY----EFHYENNNVDK 168 (345)
T ss_dssp ECCSCCTT--EEEETTCSCHHHHHHHH----TTCC----------------------CEEECCC----------------
T ss_pred ccccCCCc--eEEEcCcCCHHHHHHHH----HhcccCCccccccCccccc------CceEEEECC----ccccccccccc
Confidence 34567765 99999999999998654 5678999988899998877 999999993 5999987764
Q ss_pred CCCCC-CCc-hHHHHHHHHH-HhcCCCCcceeeeeeecCCCCCcccCCCCCCCcCCCCcEEEEecCCeeeEEEeeCCCCC
Q 025478 108 PYSWD-DFP-PLKDILDIVL-KVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPSKS 184 (252)
Q Consensus 108 ~~~w~-~~P-~L~~il~~~~-e~~~g~~~n~~LiN~Y~~G~d~i~~H~D~~~~~g~~~~IasvSLG~~r~f~fr~~~~~~ 184 (252)
..+|+ .+| +|..+++++. +.+.+..||+||||+|++|+ +|+||.|++..++ ++||+||||++|+|.|++..+
T Consensus 169 ~~p~p~~~P~~L~~l~~r~~~~~~~~~~~n~~lvN~Y~~G~-~I~~H~D~~~~~~--~~I~slSLG~~~~f~f~~~~~-- 243 (345)
T 3tht_A 169 DKPLSGGLPDICESFLEKWLRKGYIKHKPDQMTINQYEPGQ-GIPAHIDTHSAFE--DEIVSLSLGSEIVMDFKHPDG-- 243 (345)
T ss_dssp ------CCCHHHHHHHHHHHHHTSCSSCCSEEEEEEECTTC-CEEEECCCTTTBC--SCEEEEEESSCEEEEEECTTS--
T ss_pred CCCCCcCcCHHHHHHHHHHHhcccCCCCCCEEEEEEecCCC-CEeeccCCchhcC--CeEEEEECCCceeEEEccCCC--
Confidence 12332 134 5777777764 34567899999999999998 9999999998886 589999999999999998532
Q ss_pred ccCCCCCCchhhhhhhccCCCcceEEEcCCCcEEEEccCcccceeccccccCC------------------------CCC
Q 025478 185 YQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAK------------------------AES 240 (252)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~------------------------~~~ 240 (252)
...++.|++|||+||.|++|+.|+|+|++++. .++
T Consensus 244 ---------------------~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~ 302 (345)
T 3tht_A 244 ---------------------IAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRG 302 (345)
T ss_dssp ---------------------CEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEECCSSSSCEEEEECC
T ss_pred ---------------------ceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCcccccccccccccCCCceeccCC
Confidence 24789999999999999999999999999862 267
Q ss_pred ceEEEEeeccc
Q 025478 241 TRINLTFRHVL 251 (252)
Q Consensus 241 ~RISLTFR~v~ 251 (252)
.|||||||+|.
T Consensus 303 ~RiSlT~R~v~ 313 (345)
T 3tht_A 303 LRTSFTFRKVR 313 (345)
T ss_dssp CEEEEEEECBC
T ss_pred CEEEEEEEecC
Confidence 79999999985
No 5
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=99.81 E-value=2.1e-19 Score=164.31 Aligned_cols=188 Identities=21% Similarity=0.274 Sum_probs=132.3
Q ss_pred CCCCCHHH---HHHHHHHHHhcCCCCCCeeeecCceEeeeeeecCCceeeeeCCCCccceeecCCCCCCCCCCCC-----
Q 025478 43 PRIIKMED---SWKFFDYLNNRIPWNRPTIRVFGRSCLQVACISTPRDTCYVASEGVTQLIYSGYRPHPYSWDDF----- 114 (252)
Q Consensus 43 p~fl~~~e---~~~L~~~L~~~~~w~~~~~~~~G~~~~~~~~~~~pR~~~~y~~~~~~~y~y~g~~~~~~~w~~~----- 114 (252)
++-|+++. .+.||+.|.++++|+++.++||||.+.+ ||+++|||+.++. |.|+|....+.||++-
T Consensus 44 a~slp~~LH~~vd~lF~~Ll~ei~WqQD~IrIfGK~v~t------PRLtAWyGD~g~t-Y~YSGi~l~p~PWTp~~~~~~ 116 (495)
T 3lfm_A 44 ASSVSEELHKEVQEAFLTLHKHGCLFRDLVRIQGKDLLT------PVSRILIGNPGCT-YKYLNTRLFTVPWPVKGSNIK 116 (495)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHTTCCBCCEECGGGCCEEC------SSEEEEEESTTBE-EEETTEEEECEECCCC-----
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCCCCCchhcCCceecc------ceeEEEecCCCCc-eecCCCcccCCCCCcccCccc
Confidence 45566554 5789999999999999999999999988 9999999999995 9999999999999741
Q ss_pred ---chHHHHHHHH--------------HHhc-----------------------CC--------------CCcceeeeee
Q 025478 115 ---PPLKDILDIV--------------LKVL-----------------------PG--------------SRFNSLLLNR 140 (252)
Q Consensus 115 ---P~L~~il~~~--------------~e~~-----------------------~g--------------~~~n~~LiN~ 140 (252)
|.+...++.+ .+++ .| ..||.+|||+
T Consensus 117 ~~~~~~~~a~~a~~~LNd~l~~~t~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~fNvTLlN~ 196 (495)
T 3lfm_A 117 HTEAEIAAACETFLKLNDYLQIETIQALEELAAKEKANEDAVPLCMSADFPRVGMGSSYNGQDEVDIKSRAAYNVTLLNF 196 (495)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------------------CHHHHHHHTCCCEEEEEE
T ss_pred ccChhHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccCCCcccCCcccccccCcceeehhhhhc
Confidence 2221111110 0110 01 2799999998
Q ss_pred --------------ecCCCCCcccCCCCCCCcCCCCcEEEEecCCeeeEEEeeCCCCCccCCC---CCCchhhhh--hhc
Q 025478 141 --------------YKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPSKSYQDRR---TDDEPVSKR--LKK 201 (252)
Q Consensus 141 --------------Y~~G~d~i~~H~D~~~~~g~~~~IasvSLG~~r~f~fr~~~~~~~~~~~---~~~~~~~~~--~~~ 201 (252)
|.-|+..++||+|.. +.+.++||+.|.-+. ......+.. .+..+..++ +|.
T Consensus 197 Mdp~~m~~LKeEpyfgMGKmaVsWHhDen--L~~~StVAVY~~sc~--------~~~~~~~~~~~~~~~d~~~W~Vglki 266 (495)
T 3lfm_A 197 MDPQKMPYLKEEPYFGMGKMAVSWHHDEN--LVDRSAVAVYSYSCE--------GPEEESEDDSHLEGRDPDIWHVGFKI 266 (495)
T ss_dssp ECSSCSSSCCBCSSSCCCBEEEEEECCCS--BCTTCCEEEEEEECC--------C-------------CCTTSEEEEEEE
T ss_pred cCcccccccccccccCCcceeeeeccccc--cccCcceEEEEeecC--------CccccccccccCCCCCccceeEeeee
Confidence 555777899999984 456789998886432 010000000 011122222 121
Q ss_pred c--CCCcceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEeecc
Q 025478 202 K--GNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHV 250 (252)
Q Consensus 202 ~--~~~~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTFR~v 250 (252)
+ -..+...++|+.||+|.|-++.+.+|+|||-. ....|+|-|.|..
T Consensus 267 awDi~tP~L~vpL~sgd~Y~Mldd~N~~HqH~Vla---G~~~RfSSTHRVA 314 (495)
T 3lfm_A 267 SWDIETPGLAIPLHQGDCYFMLDDLNATHQHCVLA---GSQPRFSSTHRVA 314 (495)
T ss_dssp TTCCSSCEEEEEECTTCEEEECTTHHHHEEEEEEC---CSSCEEEEEEECB
T ss_pred cccCCCCceeeecCCCCeeeecchhhhhhhhhhhc---CCCccccccceee
Confidence 1 12356789999999999999999999999998 7889999999964
No 6
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=96.98 E-value=0.004 Score=53.43 Aligned_cols=156 Identities=19% Similarity=0.250 Sum_probs=85.3
Q ss_pred CCCCceEEEeCCCCCHHHHHHHHHHHHhcCCCCCCeeeecCceEeeeeeecCCceeeeeCCCCccceeecCCCCCCCCCC
Q 025478 33 LGNGSEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQVACISTPRDTCYVASEGVTQLIYSGYRPHPYSWD 112 (252)
Q Consensus 33 l~~g~~~~~~p~fl~~~e~~~L~~~L~~~~~w~~~~~~~~G~~~~~~~~~~~pR~~~~y~~~~~~~y~y~g~~~~~~~w~ 112 (252)
|.=+..+..+++|||++|+++|.+.+ +..+|....+.. |.... .-|...|.. .
T Consensus 15 ~~~~~~i~~i~dvLs~~Ec~~li~~~-e~~~~~dg~~t~-g~~~~------~vr~n~~l~------------------~- 67 (243)
T 3dkq_A 15 LYFQGMLIEIPNVFSKQEVSHLREQL-DARRWIDGNQTS-GAMAT------TRKRNQQLD------------------K- 67 (243)
T ss_dssp CCCBTTBEEECCSSCHHHHHHHHHHH-HTSCCEEECCCS-SBSSC------CCEEEEECC------------------T-
T ss_pred cccCCCEEEECCCCCHHHHHHHHHHH-hhCCCccCcccC-CCccc------cceeeeEEC------------------C-
Confidence 44566799999999999999999876 457786532211 10000 011111110 0
Q ss_pred CCchHHHHHHHHHHhcCCCC-----------cceeeeeeecCCCCCcccCCCCCCCcCCC-----CcEEEEecCCe----
Q 025478 113 DFPPLKDILDIVLKVLPGSR-----------FNSLLLNRYKGGNDYVGWHADDEKLYGST-----PEIASVSFGCE---- 172 (252)
Q Consensus 113 ~~P~L~~il~~~~e~~~g~~-----------~n~~LiN~Y~~G~d~i~~H~D~~~~~g~~-----~~IasvSLG~~---- 172 (252)
..|....+.+++...+ +.. ..-..++.|..|. ...+|.|....-.++ ..-+.+=|..+
T Consensus 68 d~~~~~~l~~~i~~~l-~~~~~f~~~~L~~~~e~~~~~rY~~G~-~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~ 145 (243)
T 3dkq_A 68 DDPVAVALGQQIMDRL-LAHPQFVSAALPLQFYPPLFNRYQGGE-TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQ 145 (243)
T ss_dssp TCHHHHHHHHHHHHHH-HTCHHHHHHHCEEEEEEEEEEEECTTC-EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEE
T ss_pred CCHHHHHHHHHHHHHH-ccCcchhhcccccccccceEEEECCCC-eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCC
Confidence 1133333333332211 222 1236788999998 999999985432111 01111112110
Q ss_pred -eeEEEeeCCCCCccCCCCCCchhhhhhhccCCCcceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEe
Q 025478 173 -RDFLLKIKPSKSYQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTF 247 (252)
Q Consensus 173 -r~f~fr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTF 247 (252)
-.+.|... .....+.++.|+++++... ..|++-++ ..+.|+++|+
T Consensus 146 GGetvf~~~------------------------~~~~~V~P~~G~~v~F~s~----~lH~v~pV--~~G~R~~~~~ 191 (243)
T 3dkq_A 146 GGELVIQDT------------------------YGQQSIKLSAGSLVLYPSS----SLHQVTPV--LSGERTAAFM 191 (243)
T ss_dssp ECCEEEEET------------------------TEEEEECCCTTCEEEEETT----SEEEECCE--EEECEEEEEE
T ss_pred CceEEEeeC------------------------CCcEEEecCCCEEEEECCC----CeEcCccc--cccCEEEEEE
Confidence 01111110 0135689999999999764 58998885 3589999986
No 7
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=96.65 E-value=0.053 Score=45.33 Aligned_cols=177 Identities=12% Similarity=0.070 Sum_probs=91.7
Q ss_pred cceEEeCCCCceEEEeCCCCCHHHHHHHHHHHHhcCCCCCCeeee--cCceEeeeeeecCCce--eeeeCCCCccceeec
Q 025478 27 QRMVVDLGNGSEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRV--FGRSCLQVACISTPRD--TCYVASEGVTQLIYS 102 (252)
Q Consensus 27 ~~~~~~l~~g~~~~~~p~fl~~~e~~~L~~~L~~~~~w~~~~~~~--~G~~~~~~~~~~~pR~--~~~y~~~~~~~y~y~ 102 (252)
|.+++.+. +.+.+++|||+++|++.|++.+.. .+.+..+.- .|..... .-|. .+|...
T Consensus 12 k~e~ls~~--P~i~~~~~fLs~~Ec~~li~~~~~--~~~~s~v~~~~~g~~~~~-----~~R~s~~~~l~~--------- 73 (224)
T 2jig_A 12 EVVHLSWS--PRAFLLKNFLSDEECDYIVEKARP--KMVKSSVVDNESGKSVDS-----EIRTSTGTWFAK--------- 73 (224)
T ss_dssp CEEEEETT--TTEEEETTCSCHHHHHHHHHHHGG--GCEECEEEETTTTEEEEC-----SSBCSEEEECCT---------
T ss_pred ceEEEeCC--CCEEEEcccCCHHHHHHHHHHhhc--cCeeeeeecCCCCccccc-----CCEEEeeeEecC---------
Confidence 45666664 569999999999999999987643 233332211 0111110 0111 112210
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHhcCCCC---cceeeeeeecCCCCCcccCCCCCCCc------CCCCcEEEEec----
Q 025478 103 GYRPHPYSWDDFPPLKDILDIVLKVLPGSR---FNSLLLNRYKGGNDYVGWHADDEKLY------GSTPEIASVSF---- 169 (252)
Q Consensus 103 g~~~~~~~w~~~P~L~~il~~~~e~~~g~~---~n~~LiN~Y~~G~d~i~~H~D~~~~~------g~~~~IasvSL---- 169 (252)
..-|.+..+.+++ +...+.. .....++.|..|+ .-.+|.|....- ..+..++++-+
T Consensus 74 ---------~~~~~~~~i~~ri-~~~~gl~~~~~e~~qv~rY~~G~-~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd 142 (224)
T 2jig_A 74 ---------GEDSVISKIEKRV-AQVTMIPLENHEGLQVLHYHDGQ-KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTT 142 (224)
T ss_dssp ---------TCSHHHHHHHHHH-HHHHTCCGGGBCCCEEEEEETTC-CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSC
T ss_pred ---------CCCHHHHHHHHHH-HHHhCCCcccccceEEEecCCCc-cccCcccCCCCccccccccCCCeEEEEEEEecC
Confidence 0013344444444 2233432 2346788999999 899999974321 11224444432
Q ss_pred ---CCeeeEEEeeCCCCCccCCCCCCchhhhhhhccCCCcceEEEcCCCcEEEEc-----cCcccceeccccccCCCCCc
Q 025478 170 ---GCERDFLLKIKPSKSYQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMR-----GYTQRDWIHSVPRRAKAEST 241 (252)
Q Consensus 170 ---G~~r~f~fr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~-----g~~q~~w~H~Ip~~~~~~~~ 241 (252)
|++-.|-. .......+...+ -......|....|+++++. |.......|++-++ ..+.
T Consensus 143 ~~~GGeT~Fp~--~~~~~~~~~~~~-----------c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV--~~G~ 207 (224)
T 2jig_A 143 VEEGGETVLPN--AEQKVTGDGWSE-----------CAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPT--LKGD 207 (224)
T ss_dssp CSEECCEEETT--SSSCCCSTTSCT-----------TGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCE--EESE
T ss_pred CCCCCceeCCC--cccccccccccc-----------cccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCcc--ccce
Confidence 33333310 000000000000 0002478999999999985 34456778888774 2578
Q ss_pred eEEEEe
Q 025478 242 RINLTF 247 (252)
Q Consensus 242 RISLTF 247 (252)
|+++|.
T Consensus 208 K~~~~~ 213 (224)
T 2jig_A 208 KWSATK 213 (224)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888875
No 8
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=96.22 E-value=0.04 Score=46.26 Aligned_cols=173 Identities=12% Similarity=0.087 Sum_probs=93.8
Q ss_pred CCCCCchhhhcccceEEeCCCCceEEEeCCCCCHHHHHHHHHHHHhcCCCCCCeeeecCceEeeeeeecCCceeeeeCCC
Q 025478 15 NPDDDDEKNQKKQRMVVDLGNGSEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQVACISTPRDTCYVASE 94 (252)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~fl~~~e~~~L~~~L~~~~~w~~~~~~~~G~~~~~~~~~~~pR~~~~y~~~ 94 (252)
+|.+..-.--.+...+..|...+.+.+++|||+++|++.|++..... +.+..+. .+..
T Consensus 17 ~~~~~~~~~~~r~v~v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~--l~~s~v~-~~~~------------------- 74 (216)
T 3itq_A 17 DHKGNVIKTEDREIQIISKFEEPLIVVLGNVLSDEECDELIELSKSK--LARSKVG-SSRD------------------- 74 (216)
T ss_dssp CCCSSEEECSSCEEEEEEEETTTTEEEEESCSCHHHHHHHHHHHHHH--HC---------C-------------------
T ss_pred cCCCCEEecCCceEEEEEeeCCCCEEEECCcCCHHHHHHHHHHhhcc--cccceec-cCCc-------------------
Confidence 44444444445555666676778899999999999999998765421 3332210 0000
Q ss_pred CccceeecCCCCCCCCCC-CCchHHHHHHHHHHhcCCCC---cceeeeeeecCCCCCcccCCCCCCCcC---CCCcEEEE
Q 025478 95 GVTQLIYSGYRPHPYSWD-DFPPLKDILDIVLKVLPGSR---FNSLLLNRYKGGNDYVGWHADDEKLYG---STPEIASV 167 (252)
Q Consensus 95 ~~~~y~y~g~~~~~~~w~-~~P~L~~il~~~~e~~~g~~---~n~~LiN~Y~~G~d~i~~H~D~~~~~g---~~~~Iasv 167 (252)
...++-+. .-|- .-|.+..+.+++ ..+.|.. ....-+..|..|+ .-.+|.|....-. .+..++++
T Consensus 75 -~~~~RtS~-----~~wl~~~~~v~~i~~Ri-~~~~gl~~~~~E~lqv~~Y~~G~-~y~~H~D~~~~~~~~~~~~R~~T~ 146 (216)
T 3itq_A 75 -VNDIRTSS-----GAFLDDNELTAKIEKRI-SSIMNVPASHGEGLHILNYEVDQ-QYKAHYDYFAEHSRSAANNRISTL 146 (216)
T ss_dssp -CCCGGGTT-----CEECCCCHHHHHHHHHH-HHHHTSCGGGBCCCEEEEECBTC-CEEEECSSCCTTSGGGGGCEEEEE
T ss_pred -cCCcEeee-----eEEeCCcHHHHHHHHHH-HHhcCceeccccceeEEEeCCCC-ccccccCCCcCCCcccCCceEEEE
Confidence 00111111 0121 113444454444 3344543 2346788899998 8899999754211 01223332
Q ss_pred ec-------CCeeeEEEeeCCCCCccCCCCCCchhhhhhhccCCCcceEEEcCCCcEEEEccC-----cccceecccccc
Q 025478 168 SF-------GCERDFLLKIKPSKSYQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGY-----TQRDWIHSVPRR 235 (252)
Q Consensus 168 SL-------G~~r~f~fr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~g~-----~q~~w~H~Ip~~ 235 (252)
-+ |++-.| . .....+....|+++++..- ......|++-++
T Consensus 147 l~YLnd~~~GGeT~F---------------------p-------~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV 198 (216)
T 3itq_A 147 VMYLNDVEEGGETFF---------------------P-------KLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPV 198 (216)
T ss_dssp EEECSCCSEECCEEE---------------------T-------TTTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCE
T ss_pred EEecccCCcCceeEe---------------------c-------CCCCEEecCCCeEEEEeccCCCCCCCCcccccccee
Confidence 21 222122 0 0136788999999998752 223567877764
Q ss_pred CCCCCceEEEEe
Q 025478 236 AKAESTRINLTF 247 (252)
Q Consensus 236 ~~~~~~RISLTF 247 (252)
..+.|+++|.
T Consensus 199 --~~G~K~v~~~ 208 (216)
T 3itq_A 199 --TKGEKWIATQ 208 (216)
T ss_dssp --EESCEEEEEE
T ss_pred --ccccEEEEEe
Confidence 3478888875
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=95.31 E-value=1.1 Score=38.13 Aligned_cols=36 Identities=22% Similarity=0.163 Sum_probs=28.1
Q ss_pred ceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEe
Q 025478 207 QHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTF 247 (252)
Q Consensus 207 ~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTF 247 (252)
..+|.-..|.+++|.... ...|+|.+ ..+.|+|||.
T Consensus 174 ~~~v~P~~grlv~F~s~~--~~~H~V~p---~~~~R~sit~ 209 (247)
T 2hbt_A 174 FADIEPKFDRLLFFWSDR--RNPHEVQP---AYATRYAITV 209 (247)
T ss_dssp CEEECCBTTEEEEEECST--TCCEEECC---BSSCEEEEEE
T ss_pred eEEEEcCCCEEEEEecCC--Cceeeecc---CCCEEEEEEE
Confidence 467888899999997542 24788887 5689999986
No 10
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=91.30 E-value=4.2 Score=39.11 Aligned_cols=30 Identities=3% Similarity=-0.021 Sum_probs=24.5
Q ss_pred EEEeCCCCCHHHHHHHHHHHHhcCCCCCCe
Q 025478 39 VIYFPRIIKMEDSWKFFDYLNNRIPWNRPT 68 (252)
Q Consensus 39 ~~~~p~fl~~~e~~~L~~~L~~~~~w~~~~ 68 (252)
...++|||+++...++.+++.+.+.|....
T Consensus 36 H~VIdnfl~d~lle~V~~Efp~~i~f~~Ke 65 (633)
T 3kt7_A 36 WGTIHELVNDDLLRAVRKEIETEIHFTKKE 65 (633)
T ss_dssp CEEESSCBCHHHHHHHHHHHHHHCCCEEEE
T ss_pred eEEECCCCCHHHHHHHHHHhhhccCccccc
Confidence 667899999988888988887778887643
No 11
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=90.89 E-value=0.95 Score=37.63 Aligned_cols=99 Identities=19% Similarity=0.226 Sum_probs=56.9
Q ss_pred ceeeeeeecCCCCCcccCCCCCCCcCCCCcEEEEecC-CeeeEEEeeCCCCCc--cCCCCCCchhhhhhhccCCCcceEE
Q 025478 134 NSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFG-CERDFLLKIKPSKSY--QDRRTDDEPVSKRLKKKGNLDQHSF 210 (252)
Q Consensus 134 n~~LiN~Y~~G~d~i~~H~D~~~~~g~~~~IasvSLG-~~r~f~fr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i 210 (252)
..+-+|.|+.|. ....|.|....+ +.|.=|+.. ....+.|........ ......+.+.. ......+
T Consensus 103 ~~~W~~~~~~G~-~~~~H~H~~~~l---SgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~-------~~~~~~i 171 (216)
T 2rg4_A 103 EDIWINILPEGG-VHGSHIHPHSVI---SGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREE-------LRTFRSV 171 (216)
T ss_dssp EEEEEEEECTTC-CEEEECCTTCSE---EEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGG-------GCSEEEE
T ss_pred eeEEEEEcCCCC-cccCccCCCCeE---EEEEEEECCCCCccEEEeCCccccccccCcccccCccc-------CCCeeEe
Confidence 458899999998 999999965432 234444442 123455543211000 00000000000 0122468
Q ss_pred EcCCCcEEEEccCcccceeccccccCCCCCceEEEEee
Q 025478 211 TLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFR 248 (252)
Q Consensus 211 ~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTFR 248 (252)
....|+|+++... ..|+|.+.. ....||||+|=
T Consensus 172 ~P~~G~lvlFpS~----l~H~V~p~~-~~~~RiSIsFN 204 (216)
T 2rg4_A 172 APKVGDVLLWESW----LRHEVPMNM-AEEDRISVSFN 204 (216)
T ss_dssp CCCTTEEEEEETT----SCEEECCCC-SSSCEEEEEEE
T ss_pred cCCCCeEEEECCC----CEEeccCCC-CCCCEEEEEEE
Confidence 8999999999544 579999844 25689999984
No 12
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=74.62 E-value=20 Score=33.52 Aligned_cols=113 Identities=13% Similarity=0.060 Sum_probs=62.1
Q ss_pred chHHHHHHHHHHhcCCCCcceeeeeeecCCC--CCcccCCCCCCCcCCCCcEEEEecCCeeeEEEeeCCCCCc-cCCCCC
Q 025478 115 PPLKDILDIVLKVLPGSRFNSLLLNRYKGGN--DYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPSKSY-QDRRTD 191 (252)
Q Consensus 115 P~L~~il~~~~e~~~g~~~n~~LiN~Y~~G~--d~i~~H~D~~~~~g~~~~IasvSLG~~r~f~fr~~~~~~~-~~~~~~ 191 (252)
|.+-++++.+. ..+|. .+-+|.|-.-. .++++|.|... +..+-+-+.+...+........ -....+
T Consensus 147 p~l~~l~~~Le-~~fg~---~v~~N~Y~tp~Gs~g~~pH~D~~D-------vFllQv~G~KrWrL~~P~~~~~~lp~~~~ 215 (489)
T 4diq_A 147 TTVWQFLAVLQ-EQFGS---MAGSNVYLTPPNSQGFAPHYDDIE-------AFVLQLEGRKLWRVYRPRAPTEELALTSS 215 (489)
T ss_dssp HHHHHHHHHHH-HHHTS---CEEEEEEEECSSBCCSCCBCCSSE-------EEEEEEEECEEEEEECCSSGGGTTCSSCC
T ss_pred hHHHHHHHHHH-HHhCC---cccceEEecCCCcccccCccCCcc-------eEEEEEeeEEEEEEeCCCCccccCCCccc
Confidence 56666655553 23352 35568776433 24569999853 4456666667777754322110 000000
Q ss_pred CchhhhhhhccCCCcceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEee
Q 025478 192 DEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFR 248 (252)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTFR 248 (252)
..- .. .......+++.|++||++.|+.. |-|.+.... .+..++|||-
T Consensus 216 ~~~--~~--~~~~~p~~e~~L~pGDvLYiP~g----~~H~~~s~~--~~~SlhlTi~ 262 (489)
T 4diq_A 216 PNF--SQ--DDLGEPVLQTVLEPGDLLYFPRG----FIHQAECQD--GVHSLHLTLS 262 (489)
T ss_dssp CCC--CG--GGCCCCSEEEEECTTCEEEECTT----CEEEEEBCS--SCCEEEEEEE
T ss_pred ccC--Cc--ccccCcceEEEECCCCEEEECCC----CceEEEecC--CCceEEEeec
Confidence 000 00 00123457899999999999876 677776631 3556777764
No 13
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=73.25 E-value=12 Score=32.81 Aligned_cols=39 Identities=18% Similarity=0.201 Sum_probs=28.6
Q ss_pred ceEEEcCCCcEEEEccCccccee--------ccccccCCCCCceEEEEee
Q 025478 207 QHSFTLKHGSMLVMRGYTQRDWI--------HSVPRRAKAESTRINLTFR 248 (252)
Q Consensus 207 ~~~i~L~~gsllvM~g~~q~~w~--------H~Ip~~~~~~~~RISLTFR 248 (252)
-+.+...+|+++|.-|++-+.|. |.|.. ....|+|+.|-
T Consensus 239 Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~---~~~~R~Sia~F 285 (331)
T 1odm_A 239 YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW---VNAERQSLPFF 285 (331)
T ss_dssp EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC---CCSCEEEEEEE
T ss_pred eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC---CCCCEEEEEEE
Confidence 35677789999999998766665 44432 36789999874
No 14
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=69.87 E-value=30 Score=31.70 Aligned_cols=113 Identities=21% Similarity=0.156 Sum_probs=59.8
Q ss_pred CchHHHHHHHHHHhcCCCCcceeeeeeecCCCCCcc--cCCCCCCCcCCCCcEEEEecCCeeeEEEeeCCCCCccCCCCC
Q 025478 114 FPPLKDILDIVLKVLPGSRFNSLLLNRYKGGNDYVG--WHADDEKLYGSTPEIASVSFGCERDFLLKIKPSKSYQDRRTD 191 (252)
Q Consensus 114 ~P~L~~il~~~~e~~~g~~~n~~LiN~Y~~G~d~i~--~H~D~~~~~g~~~~IasvSLG~~r~f~fr~~~~~~~~~~~~~ 191 (252)
.|.|-++.+.+.+ ..|. .+.+|.|-....+++ +|.|... +..+-+-+.+.+.+-..... . ....+
T Consensus 121 ~p~L~~l~~~l~~-~~g~---~~~~n~y~~~~g~~g~~~H~D~~d-------vf~~Qv~G~Krw~l~~p~~p-l-~~~~s 187 (442)
T 2xdv_A 121 KDELWRIQEKLEC-YFGS---LVGSNVYITPAGSQGLPPHYDDVE-------VFILQLEGEKHWRLYHPTVP-L-AREYS 187 (442)
T ss_dssp CHHHHHHHHHHHH-HHTS---CCEEEEEEECTTCBCSCSEECSSE-------EEEEEEESCEEEEEECCSST-T-CSSCE
T ss_pred hhHHHHHHHHHHH-HhCC---CcccceEECCCCCCCccceECCcc-------eEEEEEEeEEEEEEccCCCC-c-cccCC
Confidence 3566555554432 3353 356787876554666 9999642 33444444566666432210 0 00000
Q ss_pred CchhhhhhhccCCCcceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEeec
Q 025478 192 DEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRH 249 (252)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTFR~ 249 (252)
.. ....-.....++.|++||+|.|+.. |-|.+.... ....-+.|||-.
T Consensus 188 ~d-----~~~~~~~~~~~~~L~pGD~LYiP~g----~~H~~~s~~-~~~~SlhlT~~~ 235 (442)
T 2xdv_A 188 VE-----AEERIGRPVHEFMLKPGDLLYFPRG----TIHQADTPA-GLAHSTHVTIST 235 (442)
T ss_dssp EC-----CTTTSCSCSEEEEECTTCEEEECTT----CEEEEECCS-SSCCEEEEEEEE
T ss_pred CC-----chhhcCCcceEEEECCCcEEEECCC----ceEEEEecC-CCcceeeccccc
Confidence 00 0000012457899999999999765 677776522 123456667653
No 15
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=56.07 E-value=11 Score=30.45 Aligned_cols=35 Identities=20% Similarity=0.248 Sum_probs=28.1
Q ss_pred cceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEee
Q 025478 206 DQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFR 248 (252)
Q Consensus 206 ~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTFR 248 (252)
..+++.|++||+|.++. .|-|.|.. .+.-||++|-
T Consensus 199 ~~~~~~l~pGD~LyiP~----gW~H~V~~----l~~sisvn~w 233 (235)
T 4gjz_A 199 PFLSCILSPGEILFIPV----KYWHYVRA----LDLSFSVSFW 233 (235)
T ss_dssp CCEEEEECTTCEEEECT----TCEEEEEE----SSSEEEEEEE
T ss_pred CcEEEEECCCCEEEeCC----CCcEEEEE----CCCEEEEEEe
Confidence 45789999999999986 48899876 3457888874
No 16
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=55.19 E-value=23 Score=30.70 Aligned_cols=43 Identities=19% Similarity=0.119 Sum_probs=29.0
Q ss_pred ceEEEcCCCcEEEEccCcccceec--------cccccC---CCCCceEEEEeec
Q 025478 207 QHSFTLKHGSMLVMRGYTQRDWIH--------SVPRRA---KAESTRINLTFRH 249 (252)
Q Consensus 207 ~~~i~L~~gsllvM~g~~q~~w~H--------~Ip~~~---~~~~~RISLTFR~ 249 (252)
-+.+...+|.++|.-|++-+.|.. .|.... .....|+|+.|-.
T Consensus 212 W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~ 265 (311)
T 1dcs_A 212 FTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFL 265 (311)
T ss_dssp EEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEE
T ss_pred EEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEE
Confidence 466788899999999987666654 443211 1156799998753
No 17
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=54.92 E-value=16 Score=31.22 Aligned_cols=42 Identities=17% Similarity=0.197 Sum_probs=28.6
Q ss_pred ceEEEcCCCcEEEEccCccccee--------ccccccCC--CCCceEEEEee
Q 025478 207 QHSFTLKHGSMLVMRGYTQRDWI--------HSVPRRAK--AESTRINLTFR 248 (252)
Q Consensus 207 ~~~i~L~~gsllvM~g~~q~~w~--------H~Ip~~~~--~~~~RISLTFR 248 (252)
-+.+...+|.++|.-|++-+.|. |.|..... ....|+|+.|-
T Consensus 200 W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F 251 (280)
T 3on7_A 200 WLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLF 251 (280)
T ss_dssp EEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEE
T ss_pred EEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEE
Confidence 46677889999999998766664 55433111 24579999774
No 18
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=48.16 E-value=26 Score=30.25 Aligned_cols=42 Identities=14% Similarity=0.149 Sum_probs=28.1
Q ss_pred ceEEEcCCCcEEEEccCccccee--------ccccccC--CCCCceEEEEee
Q 025478 207 QHSFTLKHGSMLVMRGYTQRDWI--------HSVPRRA--KAESTRINLTFR 248 (252)
Q Consensus 207 ~~~i~L~~gsllvM~g~~q~~w~--------H~Ip~~~--~~~~~RISLTFR 248 (252)
-+.+...+|.++|.-|++-+.|. |.|.... .....|+|+.|-
T Consensus 217 W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F 268 (312)
T 3oox_A 217 WLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFF 268 (312)
T ss_dssp EEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEE
T ss_pred EEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEE
Confidence 46677889999999888766654 5553211 124569999774
No 19
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=47.37 E-value=45 Score=29.38 Aligned_cols=42 Identities=14% Similarity=0.023 Sum_probs=28.9
Q ss_pred ceEEEcCCCcEEEEccCcccceeccccccC------CCCCceEEEEee
Q 025478 207 QHSFTLKHGSMLVMRGYTQRDWIHSVPRRA------KAESTRINLTFR 248 (252)
Q Consensus 207 ~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~------~~~~~RISLTFR 248 (252)
-+.+...+|+++|.-|++-+.|..+.-+.. .....|+|+.|-
T Consensus 257 Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F 304 (356)
T 1gp6_A 257 WVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVF 304 (356)
T ss_dssp EEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEE
T ss_pred EEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEe
Confidence 466788899999999987766654432211 135689999874
No 20
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=45.94 E-value=49 Score=26.87 Aligned_cols=92 Identities=17% Similarity=0.188 Sum_probs=57.2
Q ss_pred chHHHHHHHHHHhcCCCCcceeeeeeecCCCCCcccCCCCCCCcCCCCcEEEEecCC-----eeeEEEeeCCCCCccCCC
Q 025478 115 PPLKDILDIVLKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGC-----ERDFLLKIKPSKSYQDRR 189 (252)
Q Consensus 115 P~L~~il~~~~e~~~g~~~n~~LiN~Y~~G~d~i~~H~D~~~~~g~~~~IasvSLG~-----~r~f~fr~~~~~~~~~~~ 189 (252)
|....+++.+-. ..+..+-.+.+....+|+ .|.+|.|-.. ....+-||- .|.|.+ +
T Consensus 84 P~T~~lL~~ip~-~~~~~~~~a~fs~L~pG~-~I~pH~g~~n------~~lR~HL~L~~p~~~~~i~V----~------- 144 (197)
T 3rcq_A 84 PKTCTLLEKFPE-TTGCRRGQIKYSIMHPGT-HVWPHTGPTN------CRLRMHLGLVIPKEGCKIRC----A------- 144 (197)
T ss_dssp HHHHHHHTTCHH-HHTCTTCEEEEEEECTTE-EEEEECCSCT------TEEEEEEEEECCSSSEEEEE----T-------
T ss_pred HHHHHHHHhCcc-cccCCcceEEEEEeCCCC-CcCCeeCCCC------CeEEEEEEEEeCCCCcEEEE----C-------
Confidence 455555554321 113445578888999999 9999999643 233333331 233322 1
Q ss_pred CCCchhhhhhhccCCCcceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEee
Q 025478 190 TDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFR 248 (252)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTFR 248 (252)
........|.++++... +.|.+-.. ..+.||.|-|-
T Consensus 145 -----------------~~~~~w~eGe~~~fDds----~~Hev~N~--~d~~RvvL~~D 180 (197)
T 3rcq_A 145 -----------------NETKTWEEGKVLIFDDS----FEHEVWQD--ASSFRLIFIVD 180 (197)
T ss_dssp -----------------TEEECCCBTCEEEECTT----SCEEEEEC--SSSCEEEEEEE
T ss_pred -----------------CEEEEeeCCcEEEEcCC----eEEEEEEC--CCCCEEEEEEe
Confidence 13478899999999664 46666543 57899998764
No 21
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=44.77 E-value=51 Score=28.50 Aligned_cols=95 Identities=17% Similarity=0.051 Sum_probs=53.9
Q ss_pred CchHHHHHHHHHHhcCCCCc-ceeeeeeecCCCCCcccCCCC-CCC-c--CCCCcEEEEecCCeeeEEEeeCCCCCccCC
Q 025478 114 FPPLKDILDIVLKVLPGSRF-NSLLLNRYKGGNDYVGWHADD-EKL-Y--GSTPEIASVSFGCERDFLLKIKPSKSYQDR 188 (252)
Q Consensus 114 ~P~L~~il~~~~e~~~g~~~-n~~LiN~Y~~G~d~i~~H~D~-~~~-~--g~~~~IasvSLG~~r~f~fr~~~~~~~~~~ 188 (252)
.|.+..+++.. ++... ..+-+ .-.+|. .|.+|.|. +.. + +..-.=.-|.--..+.|.+.
T Consensus 75 ~P~i~~il~~~----f~~~~l~~vRl-rL~PG~-~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vd---------- 138 (290)
T 1e5r_A 75 VPYLKEIVTTV----FDGTHLQMARS-RNLKNA-IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNE---------- 138 (290)
T ss_dssp SCHHHHHHHHH----BCSSSEEEEEE-EEEESE-EEEEECCC--------CBCCEEEECSCCTTEEEEET----------
T ss_pred ChHHHHHHHHh----cccchhheEEE-EeCCCC-EeeCccCccccccccCCceEEEeeEecCCCcEEEEC----------
Confidence 46676666432 24332 55656 888888 89999998 311 1 11111112222333444331
Q ss_pred CCCCchhhhhhhccCCCcceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEee
Q 025478 189 RTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFR 248 (252)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTFR 248 (252)
-..+.+..|.+.++.- ...|.+... ....||.|.+=
T Consensus 139 ------------------g~~~~m~~GE~w~~d~----~~~H~v~N~--g~~~RIhLv~D 174 (290)
T 1e5r_A 139 ------------------DTVIHMRPGEIWFLDA----ATVHSAVNF--SEISRQSLCVD 174 (290)
T ss_dssp ------------------TEEECCCTTEEEECCT----TSCEEEEES--SSSCCCEEEEE
T ss_pred ------------------CEEEecCCCCEEEEcC----CCeeEEEcC--CCCCeEEEEEE
Confidence 1458999999998862 335666552 56789998763
No 22
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=39.30 E-value=57 Score=28.23 Aligned_cols=42 Identities=12% Similarity=0.042 Sum_probs=28.8
Q ss_pred ceEEEcCCCcEEEEccCcccceeccccccC------CCCCceEEEEee
Q 025478 207 QHSFTLKHGSMLVMRGYTQRDWIHSVPRRA------KAESTRINLTFR 248 (252)
Q Consensus 207 ~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~------~~~~~RISLTFR 248 (252)
-+.+...+|+++|.-|++-+.|..+.-+.. .....|+|+.|-
T Consensus 203 Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F 250 (319)
T 1w9y_A 203 WIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASF 250 (319)
T ss_dssp EEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEE
T ss_pred EEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEE
Confidence 466778899999999987666654432211 135679999874
No 23
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=38.35 E-value=27 Score=29.31 Aligned_cols=40 Identities=15% Similarity=0.337 Sum_probs=30.2
Q ss_pred cceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEeecc
Q 025478 206 DQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHV 250 (252)
Q Consensus 206 ~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTFR~v 250 (252)
....+.++.||++++.+.+ .|+..... ....|+++++|.+
T Consensus 226 ~~v~~~~~aGd~~~f~~~~----~H~s~~N~-s~~~R~~~~~~~~ 265 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEV----VHKSKQNL-SDRSRQAYTFHLM 265 (291)
T ss_dssp GCEEECBCTTCEEEEETTC----EEEECCBC-SSSCCCEEEEEEE
T ss_pred CeeecccCCCcEEEEcCCc----eecCCCCC-CCCceEEEEEEEE
Confidence 4577999999999999863 56655433 3468999999865
No 24
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=35.26 E-value=43 Score=28.39 Aligned_cols=41 Identities=15% Similarity=0.328 Sum_probs=30.6
Q ss_pred cceEEEcCCCcEEEEccCcccceeccccccC-CCCCceEEEEeecc
Q 025478 206 DQHSFTLKHGSMLVMRGYTQRDWIHSVPRRA-KAESTRINLTFRHV 250 (252)
Q Consensus 206 ~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~-~~~~~RISLTFR~v 250 (252)
....+.++.||++++.+.+ .|+-.... .....|.++++|.+
T Consensus 218 ~~v~~~~~aGd~v~f~~~l----~H~s~~N~~ss~~~R~a~~~~y~ 259 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWSTL----MHASYPHSGESQEMRMGFASRYV 259 (313)
T ss_dssp GCEEECBCTTEEEEEETTS----EEEECCBCSSSSSCEEEEEEEEE
T ss_pred ceeEeeeCCceEEEEeCCc----eeeCCCCCCCCCCceEEEEEEEE
Confidence 4577999999999999863 56655433 24568999998864
No 25
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=31.79 E-value=44 Score=29.37 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=28.3
Q ss_pred cceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEeec
Q 025478 206 DQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRH 249 (252)
Q Consensus 206 ~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTFR~ 249 (252)
..+++.|++||+|.++.. |-|.|..... .+.-||+.|..
T Consensus 259 ~~~~~~l~pGD~LyiP~g----WwH~V~~l~d-~~~sisvn~w~ 297 (349)
T 3d8c_A 259 VGYETVVGPGDVLYIPMY----WWHHIESLLN-GGITITVNFWY 297 (349)
T ss_dssp CEEEEEECTTCEEEECTT----CEEEEEECTT-SCCEEEEEEEE
T ss_pred CcEEEEECCCCEEEECCC----CcEEEEEcCC-CCcEEEEEEEc
Confidence 458899999999999875 8888887310 24567777653
No 26
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=29.77 E-value=42 Score=29.49 Aligned_cols=37 Identities=27% Similarity=0.350 Sum_probs=28.5
Q ss_pred CcceEEEcCCCcEEEEccCcccceeccccccCCC-CCceEEEEee
Q 025478 205 LDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKA-ESTRINLTFR 248 (252)
Q Consensus 205 ~~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~-~~~RISLTFR 248 (252)
....++.|++||+|.|+.. |-|.+.. . .+.-+++||.
T Consensus 215 ~~~~~~~L~pGD~LyiP~g----wwH~v~s---~~~~~slsvsi~ 252 (342)
T 1vrb_A 215 PDAEIVNLTPGTMLYLPRG----LWHSTKS---DQATLALNITFG 252 (342)
T ss_dssp CSSEEEEECTTCEEEECTT----CEEEEEC---SSCEEEEEEEEC
T ss_pred CCceEEEECCCcEEEeCCC----ccEEEEE---CCCCceEEEEEC
Confidence 3568899999999999865 6788776 3 2467888876
No 27
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=27.52 E-value=71 Score=26.95 Aligned_cols=40 Identities=10% Similarity=0.247 Sum_probs=29.7
Q ss_pred cceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEEeecc
Q 025478 206 DQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHV 250 (252)
Q Consensus 206 ~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLTFR~v 250 (252)
....+.++.||++++.+.+ .|+-.... ....|.+++|+..
T Consensus 214 ~~v~~~~~aGd~vlf~~~~----~H~s~~N~-s~~~R~~~~~~y~ 253 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPLL----IHGSGQNK-TQGFRKAISCHFA 253 (308)
T ss_dssp CCEEECBCTTCEEEECTTC----CEEECCBC-SSSCEEEEEEEEE
T ss_pred CeEEccCCCccEEEECCCc----cccCCCCC-CCCceEEEEEEEE
Confidence 4577999999999999863 46544432 3478999998754
No 28
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=23.98 E-value=66 Score=28.04 Aligned_cols=36 Identities=19% Similarity=0.532 Sum_probs=26.9
Q ss_pred cceEEEcCCCcEEEEccCcccceeccccccCCCCCceEEEE--eec
Q 025478 206 DQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLT--FRH 249 (252)
Q Consensus 206 ~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISLT--FR~ 249 (252)
..+++.|++||+|.++.. |-|.|... +.-||++ ||.
T Consensus 238 ~~~~~~L~pGD~LyiP~g----WwH~v~~l----~~sisvn~~~~~ 275 (338)
T 3al5_A 238 RRYECSLEAGDVLFIPAL----WFHNVISE----EFGVGVNIFWKH 275 (338)
T ss_dssp CEEEEEECTTCEEEECTT----CEEEEEES----SCEEEEEEEECS
T ss_pred CCEEEEECCCCEEEECCC----CeEEEeeC----CCEEEEEEEecC
Confidence 358899999999999864 88988873 3456665 543
No 29
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=23.37 E-value=1.6e+02 Score=21.19 Aligned_cols=20 Identities=15% Similarity=0.087 Sum_probs=16.2
Q ss_pred EEEcCCCcEEEEccCcccce
Q 025478 209 SFTLKHGSMLVMRGYTQRDW 228 (252)
Q Consensus 209 ~i~L~~gsllvM~g~~q~~w 228 (252)
.+.|..||++.+.......|
T Consensus 78 ~~~l~~GD~v~ip~g~~H~~ 97 (119)
T 3lwc_A 78 TVTAGPGEIVYMPKGETVTI 97 (119)
T ss_dssp EEEECTTCEEEECTTCEEEE
T ss_pred EEEECCCCEEEECCCCEEEE
Confidence 48899999999998876333
No 30
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=23.16 E-value=60 Score=27.02 Aligned_cols=40 Identities=13% Similarity=0.177 Sum_probs=27.8
Q ss_pred ceEEEcCCCcEEEEccCcccceeccccccCCCC--CceEEEEeecc
Q 025478 207 QHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAE--STRINLTFRHV 250 (252)
Q Consensus 207 ~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~~~~--~~RISLTFR~v 250 (252)
...+.++.||++++.+.+ .|+-....... ..|+++++|..
T Consensus 210 ~v~~~~~aGdv~lf~~~~----~H~s~~N~s~~~R~~R~s~~~~~~ 251 (288)
T 2rdq_A 210 LLHSPMEPGDILLFHAHM----CHKSIPNLSKDPRLMRMSMDTRVQ 251 (288)
T ss_dssp EECCCCCTTCEEEEETTC----CEEEECCCCCTTCCCEEEEEEEEE
T ss_pred eeecccCCCCEEEEeCCc----eecCCCCCCCCccceEEEEEEEEe
Confidence 466899999999999863 46544432222 45899998864
No 31
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=22.52 E-value=65 Score=27.75 Aligned_cols=41 Identities=20% Similarity=0.308 Sum_probs=29.6
Q ss_pred cceEEEcCCCcEEEEccCcccceeccccccC-CCCCceEEEEeecc
Q 025478 206 DQHSFTLKHGSMLVMRGYTQRDWIHSVPRRA-KAESTRINLTFRHV 250 (252)
Q Consensus 206 ~~~~i~L~~gsllvM~g~~q~~w~H~Ip~~~-~~~~~RISLTFR~v 250 (252)
..+.+.++.||++++.+.+ .|+-.... .....|.++++|.+
T Consensus 220 ~~v~~~~~aGd~v~f~~~~----~H~s~~N~~ts~~~R~a~~~~y~ 261 (319)
T 3gja_A 220 QAYPMVLKPGEAVIFWSNT----MHASLPHTGSKTDYRMGFAARYV 261 (319)
T ss_dssp -CCBCCBCTTEEEEEETTS----CEEECCCCSCTTCCEEEEEEEEE
T ss_pred ceeEeeECCCeEEEEcCCc----cccCCCCCCCCCCcEEEEEEEEE
Confidence 4566889999999999875 46544433 14578999998864
No 32
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=21.96 E-value=1e+02 Score=26.02 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=23.5
Q ss_pred EcCCCcEEEEccCcccceeccccccCCCC-------Cce--EEEEeec
Q 025478 211 TLKHGSMLVMRGYTQRDWIHSVPRRAKAE-------STR--INLTFRH 249 (252)
Q Consensus 211 ~L~~gsllvM~g~~q~~w~H~Ip~~~~~~-------~~R--ISLTFR~ 249 (252)
.+++||++++... .-.|.|.+..... +-| +-||||.
T Consensus 203 l~~p~d~llv~D~---~~~H~vTpI~~~~~~~~~~~g~RDvlVvtf~~ 247 (254)
T 3pl0_A 203 LEQPWTVLLLDDQ---QVIHESTPLLPLDPADPAVPAHRDTLVLTYRS 247 (254)
T ss_dssp CCSTTCEEEEETT---TEEEEECCEEESCTTCTTSCCEEEEEEEEEES
T ss_pred ecCCCcEEEEeCC---cccCCCCccccCCCCCCCCceEEEEEEEEecC
Confidence 4599999999876 4467777654222 334 4467775
Done!