Query 025480
Match_columns 252
No_of_seqs 113 out of 295
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 11:10:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025480.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025480hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mb5_A SAM-dependent methyltra 99.3 5.2E-11 1.8E-15 102.7 15.6 121 16-235 1-121 (255)
2 1i9g_A Hypothetical protein RV 99.3 1.3E-10 4.5E-15 101.4 15.4 123 15-235 5-127 (280)
3 1o54_A SAM-dependent O-methylt 99.2 5.1E-10 1.7E-14 98.4 14.2 124 14-235 17-140 (277)
4 2pwy_A TRNA (adenine-N(1)-)-me 99.0 1.4E-09 4.7E-14 93.3 10.1 123 15-235 2-124 (258)
5 2b25_A Hypothetical protein; s 98.9 1.3E-08 4.4E-13 92.1 11.4 127 12-235 5-133 (336)
6 2yvl_A TRMI protein, hypotheti 98.4 8.2E-06 2.8E-10 69.2 16.0 110 16-228 3-112 (248)
7 1yb2_A Hypothetical protein TA 95.5 0.074 2.5E-06 46.1 9.8 40 196-235 99-138 (275)
8 4df3_A Fibrillarin-like rRNA/T 92.2 0.19 6.6E-06 43.8 5.6 33 203-235 73-105 (233)
9 3eey_A Putative rRNA methylase 90.2 0.31 1E-05 39.3 4.6 42 194-235 9-50 (197)
10 2yxe_A Protein-L-isoaspartate 90.2 0.62 2.1E-05 37.9 6.5 45 191-235 61-105 (215)
11 3id6_C Fibrillarin-like rRNA/T 89.8 0.46 1.6E-05 41.2 5.6 39 197-235 63-104 (232)
12 1i1n_A Protein-L-isoaspartate 88.7 0.8 2.7E-05 37.7 6.2 44 192-235 60-105 (226)
13 2pbf_A Protein-L-isoaspartate 88.6 0.81 2.8E-05 37.7 6.1 45 191-235 62-112 (227)
14 1nkv_A Hypothetical protein YJ 87.1 1.3 4.4E-05 36.9 6.5 44 188-231 17-60 (256)
15 3e05_A Precorrin-6Y C5,15-meth 86.5 1.4 4.6E-05 35.7 6.2 44 191-235 24-67 (204)
16 3tr6_A O-methyltransferase; ce 86.5 0.33 1.1E-05 39.9 2.5 53 183-235 40-92 (225)
17 1jg1_A PIMT;, protein-L-isoasp 86.2 1.1 3.7E-05 37.4 5.5 43 191-235 75-117 (235)
18 2avd_A Catechol-O-methyltransf 85.7 0.47 1.6E-05 39.1 3.0 49 187-235 49-97 (229)
19 2hnk_A SAM-dependent O-methylt 85.0 0.5 1.7E-05 39.6 2.9 47 189-235 42-88 (239)
20 2bm8_A Cephalosporin hydroxyla 84.6 0.84 2.9E-05 38.8 4.1 45 191-235 64-112 (236)
21 1g8a_A Fibrillarin-like PRE-rR 84.2 0.96 3.3E-05 37.3 4.3 36 200-235 66-101 (227)
22 1r18_A Protein-L-isoaspartate( 84.0 1.3 4.3E-05 36.7 4.9 40 192-231 67-108 (227)
23 3r3h_A O-methyltransferase, SA 84.0 0.53 1.8E-05 40.2 2.6 48 188-235 41-88 (242)
24 1nt2_A Fibrillarin-like PRE-rR 83.9 1.4 4.8E-05 36.7 5.2 39 196-235 44-84 (210)
25 2ipx_A RRNA 2'-O-methyltransfe 83.7 1.7 6E-05 36.0 5.7 42 194-235 61-105 (233)
26 1fbn_A MJ fibrillarin homologu 83.6 1.2 4E-05 37.1 4.6 40 195-235 59-101 (230)
27 3duw_A OMT, O-methyltransferas 83.4 0.39 1.3E-05 39.5 1.5 48 188-235 39-86 (223)
28 3lbf_A Protein-L-isoaspartate 83.4 1.8 6.2E-05 34.9 5.6 38 191-228 61-98 (210)
29 3c3y_A Pfomt, O-methyltransfer 81.5 3.3 0.00011 34.9 6.6 53 183-235 46-98 (237)
30 3tfw_A Putative O-methyltransf 81.3 0.6 2E-05 39.7 1.9 44 192-235 48-91 (248)
31 1dl5_A Protein-L-isoaspartate 81.2 2.8 9.5E-05 36.9 6.3 44 192-235 60-103 (317)
32 1ej0_A FTSJ; methyltransferase 80.5 2.9 9.8E-05 31.8 5.5 40 196-235 10-50 (180)
33 3dr5_A Putative O-methyltransf 79.9 2.5 8.4E-05 35.5 5.3 40 196-235 45-84 (221)
34 3dh0_A SAM dependent methyltra 79.7 3.1 0.00011 33.6 5.7 51 182-235 15-65 (219)
35 3hem_A Cyclopropane-fatty-acyl 78.2 1.9 6.7E-05 37.2 4.2 36 195-230 60-95 (302)
36 2nyu_A Putative ribosomal RNA 77.5 4.9 0.00017 31.8 6.2 31 202-232 17-47 (196)
37 3bkx_A SAM-dependent methyltra 76.8 3.6 0.00012 34.5 5.4 40 196-235 32-71 (275)
38 1ixk_A Methyltransferase; open 76.7 2.8 9.7E-05 37.1 5.0 43 193-235 103-146 (315)
39 1u2z_A Histone-lysine N-methyl 76.5 3 0.0001 39.4 5.3 41 190-230 225-265 (433)
40 3gru_A Dimethyladenosine trans 76.5 3.7 0.00013 36.6 5.6 36 193-228 36-71 (295)
41 1kpg_A CFA synthase;, cyclopro 76.2 2 6.9E-05 36.5 3.7 37 195-231 52-88 (287)
42 1vbf_A 231AA long hypothetical 75.9 4.5 0.00015 33.1 5.6 39 191-229 54-92 (231)
43 1sui_A Caffeoyl-COA O-methyltr 75.3 6.8 0.00023 33.3 6.8 52 184-235 56-107 (247)
44 3hm2_A Precorrin-6Y C5,15-meth 75.1 2.2 7.6E-05 33.1 3.4 42 193-235 11-52 (178)
45 3uzu_A Ribosomal RNA small sub 75.0 4.2 0.00014 35.9 5.5 42 194-235 29-71 (279)
46 2b9e_A NOL1/NOP2/SUN domain fa 74.5 2.8 9.5E-05 37.5 4.3 40 196-235 90-130 (309)
47 2fk8_A Methoxy mycolic acid sy 74.3 2.5 8.6E-05 36.7 3.9 38 194-231 77-114 (318)
48 3u81_A Catechol O-methyltransf 74.2 2.2 7.4E-05 35.2 3.3 47 189-235 40-86 (221)
49 2gpy_A O-methyltransferase; st 74.1 2.7 9.2E-05 34.7 3.9 45 190-235 37-81 (233)
50 3njr_A Precorrin-6Y methylase; 74.0 3.9 0.00013 33.6 4.8 38 191-228 39-76 (204)
51 2plw_A Ribosomal RNA methyltra 74.0 4.2 0.00014 32.4 4.9 40 196-235 10-51 (201)
52 3ujc_A Phosphoethanolamine N-m 74.0 3.8 0.00013 33.9 4.8 38 193-230 41-78 (266)
53 3cbg_A O-methyltransferase; cy 73.4 1.7 5.8E-05 36.4 2.4 46 190-235 55-100 (232)
54 1l3i_A Precorrin-6Y methyltran 73.3 4.2 0.00014 31.6 4.6 40 190-229 16-55 (192)
55 2frx_A Hypothetical protein YE 71.9 3.5 0.00012 39.2 4.5 43 193-235 100-145 (479)
56 1qam_A ERMC' methyltransferase 71.0 6.3 0.00021 33.5 5.6 37 193-229 16-52 (244)
57 2yxl_A PH0851 protein, 450AA l 70.7 4 0.00014 38.1 4.6 43 193-235 244-287 (450)
58 3ajd_A Putative methyltransfer 70.0 3.9 0.00013 35.2 4.1 34 202-235 78-111 (274)
59 3tqs_A Ribosomal RNA small sub 69.6 3.1 0.00011 36.1 3.4 36 193-228 15-50 (255)
60 3ftd_A Dimethyladenosine trans 69.0 5.2 0.00018 34.4 4.6 35 194-228 18-52 (249)
61 2hl7_A Cytochrome C-type bioge 68.6 3.5 0.00012 30.6 3.0 41 98-138 30-71 (84)
62 3m4x_A NOL1/NOP2/SUN family pr 68.4 4.3 0.00015 38.5 4.3 34 202-235 100-133 (456)
63 3fut_A Dimethyladenosine trans 68.1 5.4 0.00019 35.0 4.6 35 193-228 33-67 (271)
64 3m6w_A RRNA methylase; rRNA me 67.8 4.6 0.00016 38.5 4.3 39 197-235 90-129 (464)
65 1qyr_A KSGA, high level kasuga 65.5 7.8 0.00027 33.5 5.0 39 194-235 8-46 (252)
66 3f4k_A Putative methyltransfer 62.8 15 0.0005 30.3 6.1 41 191-231 29-70 (257)
67 3mti_A RRNA methylase; SAM-dep 62.7 5.6 0.00019 31.3 3.3 33 196-228 11-43 (185)
68 3bus_A REBM, methyltransferase 62.6 11 0.00037 31.4 5.3 35 196-230 50-84 (273)
69 3kkz_A Uncharacterized protein 61.8 19 0.00064 30.1 6.7 38 191-228 29-67 (267)
70 3c3p_A Methyltransferase; NP_9 60.9 5 0.00017 32.5 2.8 44 192-235 41-84 (210)
71 3ntv_A MW1564 protein; rossman 60.8 6.7 0.00023 32.6 3.6 45 190-235 54-98 (232)
72 2yxd_A Probable cobalt-precorr 59.9 16 0.00055 27.9 5.5 38 190-227 18-55 (183)
73 1zq9_A Probable dimethyladenos 59.7 10 0.00035 32.9 4.8 36 193-228 14-49 (285)
74 2p35_A Trans-aconitate 2-methy 59.5 12 0.00042 30.7 5.1 40 191-230 17-56 (259)
75 2o57_A Putative sarcosine dime 59.3 6.8 0.00023 33.3 3.5 36 196-231 67-106 (297)
76 3tma_A Methyltransferase; thum 57.9 14 0.00049 32.7 5.5 47 189-235 185-231 (354)
77 3uwp_A Histone-lysine N-methyl 56.5 14 0.00049 35.1 5.5 40 192-231 158-197 (438)
78 4gek_A TRNA (CMO5U34)-methyltr 56.4 9.1 0.00031 33.0 3.8 32 204-235 67-99 (261)
79 3iv6_A Putative Zn-dependent a 55.9 10 0.00036 33.0 4.1 35 194-228 32-66 (261)
80 3gu3_A Methyltransferase; alph 55.1 16 0.00053 31.2 5.1 44 192-235 6-50 (284)
81 1vl5_A Unknown conserved prote 54.1 9.7 0.00033 31.7 3.5 34 196-229 26-59 (260)
82 3mgg_A Methyltransferase; NYSG 53.8 14 0.00047 30.9 4.5 39 196-235 25-64 (276)
83 3vc1_A Geranyl diphosphate 2-C 53.4 17 0.00058 31.4 5.1 35 196-230 105-140 (312)
84 1dus_A MJ0882; hypothetical pr 53.0 14 0.00048 28.5 4.1 34 195-228 40-73 (194)
85 2nyg_A YOKD protein; PFAM02522 51.8 36 0.0012 30.1 7.0 45 191-235 13-66 (273)
86 1m6y_A S-adenosyl-methyltransf 50.8 14 0.00047 32.9 4.2 39 196-235 15-53 (301)
87 3s2e_A Zinc-containing alcohol 50.5 20 0.00068 31.4 5.1 36 198-235 157-193 (340)
88 3lec_A NADB-rossmann superfami 49.9 11 0.00036 32.6 3.2 31 204-235 18-48 (230)
89 1xxl_A YCGJ protein; structura 49.7 14 0.00048 30.4 3.8 34 196-229 10-43 (239)
90 2kw0_A CCMH protein; oxidoredu 49.4 8.6 0.00029 28.9 2.2 41 98-138 27-68 (90)
91 1sqg_A SUN protein, FMU protei 48.9 18 0.00063 33.2 4.8 42 193-235 231-273 (429)
92 2h1r_A Dimethyladenosine trans 48.4 12 0.00041 32.8 3.4 35 194-228 29-63 (299)
93 2dph_A Formaldehyde dismutase; 48.3 17 0.00059 32.7 4.5 37 198-235 176-213 (398)
94 3evz_A Methyltransferase; NYSG 48.1 29 0.00098 28.0 5.5 37 192-229 41-78 (230)
95 3two_A Mannitol dehydrogenase; 47.9 23 0.00079 31.1 5.2 36 198-235 167-203 (348)
96 1yub_A Ermam, rRNA methyltrans 47.8 8.1 0.00028 32.5 2.1 34 195-228 17-50 (245)
97 3ijw_A Aminoglycoside N3-acety 47.7 40 0.0014 29.8 6.6 44 192-235 16-68 (268)
98 4eez_A Alcohol dehydrogenase 1 47.7 14 0.00049 32.2 3.7 37 198-235 154-191 (348)
99 3orh_A Guanidinoacetate N-meth 47.7 11 0.00038 31.5 2.9 25 206-230 59-83 (236)
100 4fsd_A Arsenic methyltransfera 47.2 14 0.00049 33.2 3.7 33 203-235 79-111 (383)
101 2esr_A Methyltransferase; stru 47.1 26 0.00089 27.0 4.9 29 205-235 29-57 (177)
102 3utn_X Thiosulfate sulfurtrans 46.9 33 0.0011 30.9 6.1 47 192-239 97-147 (327)
103 3gnl_A Uncharacterized protein 46.3 13 0.00043 32.4 3.1 25 204-228 18-42 (244)
104 1kol_A Formaldehyde dehydrogen 46.3 20 0.00068 32.2 4.6 34 198-231 176-210 (398)
105 3tka_A Ribosomal RNA small sub 46.1 18 0.00063 33.3 4.3 44 196-239 46-90 (347)
106 1pjz_A Thiopurine S-methyltran 45.3 18 0.00062 29.3 3.8 33 196-228 11-43 (203)
107 1f8f_A Benzyl alcohol dehydrog 44.8 20 0.0007 31.8 4.3 31 201-231 184-215 (371)
108 2fyt_A Protein arginine N-meth 44.4 21 0.00073 31.7 4.4 32 197-228 54-85 (340)
109 2fzw_A Alcohol dehydrogenase c 44.3 22 0.00074 31.6 4.4 35 200-235 183-218 (373)
110 2ih2_A Modification methylase 44.1 43 0.0015 29.8 6.4 38 198-235 30-67 (421)
111 1pl8_A Human sorbitol dehydrog 44.1 21 0.00071 31.6 4.2 35 200-235 164-199 (356)
112 3g5t_A Trans-aconitate 3-methy 42.6 33 0.0011 29.2 5.2 30 206-235 35-64 (299)
113 3dlc_A Putative S-adenosyl-L-m 42.5 25 0.00085 27.7 4.1 33 195-228 32-64 (219)
114 1p0f_A NADP-dependent alcohol 42.3 24 0.00083 31.3 4.4 35 200-235 184-219 (373)
115 2ozv_A Hypothetical protein AT 42.1 21 0.00073 30.2 3.9 36 193-229 23-58 (260)
116 2xk0_A Polycomb protein PCL; t 42.0 50 0.0017 23.6 5.1 23 15-38 14-36 (69)
117 1cdo_A Alcohol dehydrogenase; 41.9 25 0.00086 31.2 4.5 35 200-235 185-220 (374)
118 1uuf_A YAHK, zinc-type alcohol 41.6 26 0.0009 31.3 4.6 35 198-232 185-220 (369)
119 3grz_A L11 mtase, ribosomal pr 41.5 32 0.0011 27.3 4.7 29 205-235 58-86 (205)
120 2jhf_A Alcohol dehydrogenase E 41.4 26 0.00088 31.2 4.5 35 200-235 184-219 (374)
121 3sma_A FRBF; N-acetyl transfer 41.1 66 0.0023 28.8 7.0 45 191-235 22-75 (286)
122 1wy7_A Hypothetical protein PH 40.8 46 0.0016 26.3 5.5 31 203-235 45-75 (207)
123 1e3i_A Alcohol dehydrogenase, 40.3 28 0.00094 31.0 4.5 35 200-235 188-223 (376)
124 4ej6_A Putative zinc-binding d 40.0 26 0.00088 31.3 4.2 36 199-235 174-210 (370)
125 3fpc_A NADP-dependent alcohol 39.9 24 0.00082 31.1 4.0 37 198-235 157-194 (352)
126 3bkw_A MLL3908 protein, S-aden 39.9 42 0.0014 27.0 5.2 32 197-228 33-64 (243)
127 1e3j_A NADP(H)-dependent ketos 39.8 27 0.00091 30.8 4.2 34 199-232 160-194 (352)
128 1wzn_A SAM-dependent methyltra 39.3 37 0.0013 27.7 4.9 36 193-228 27-62 (252)
129 1xtp_A LMAJ004091AAA; SGPP, st 39.1 30 0.001 28.1 4.3 38 192-229 78-115 (254)
130 3ou2_A SAM-dependent methyltra 39.0 34 0.0012 26.9 4.5 26 203-228 42-67 (218)
131 2pxx_A Uncharacterized protein 38.9 59 0.002 25.4 5.8 36 192-228 28-63 (215)
132 3uog_A Alcohol dehydrogenase; 38.8 28 0.00097 30.9 4.3 31 201-231 183-214 (363)
133 3i9f_A Putative type 11 methyl 38.5 5.1 0.00017 31.0 -0.7 32 198-229 8-39 (170)
134 3kr9_A SAM-dependent methyltra 38.2 17 0.0006 31.0 2.7 25 204-228 12-36 (225)
135 3tqh_A Quinone oxidoreductase; 38.1 30 0.001 30.0 4.2 34 198-231 143-178 (321)
136 3fpf_A Mtnas, putative unchara 38.0 28 0.00096 31.2 4.1 28 201-228 116-143 (298)
137 3hnr_A Probable methyltransfer 37.9 20 0.00068 28.7 2.9 33 196-228 34-66 (220)
138 3lpm_A Putative methyltransfer 37.3 20 0.00069 30.1 2.9 31 199-229 40-71 (259)
139 3m6i_A L-arabinitol 4-dehydrog 37.1 28 0.00097 30.7 4.0 35 198-232 170-205 (363)
140 4dzr_A Protein-(glutamine-N5) 36.7 43 0.0015 26.1 4.7 37 198-235 20-57 (215)
141 3goh_A Alcohol dehydrogenase, 36.3 42 0.0014 28.9 4.9 36 198-235 133-169 (315)
142 1piw_A Hypothetical zinc-type 36.0 35 0.0012 30.1 4.5 35 198-232 170-205 (360)
143 1ne2_A Hypothetical protein TA 35.7 46 0.0016 26.3 4.7 30 204-235 48-77 (200)
144 1vj0_A Alcohol dehydrogenase, 35.6 40 0.0014 30.1 4.8 32 198-230 185-219 (380)
145 3p9n_A Possible methyltransfer 35.5 67 0.0023 25.1 5.7 28 206-235 43-70 (189)
146 3mq2_A 16S rRNA methyltransfer 35.2 24 0.00082 28.3 2.9 41 190-235 14-54 (218)
147 3jv7_A ADH-A; dehydrogenase, n 35.0 38 0.0013 29.6 4.4 35 198-232 160-197 (345)
148 2xvm_A Tellurite resistance pr 34.9 40 0.0014 26.1 4.2 31 198-228 23-53 (199)
149 3r0q_C Probable protein argini 34.4 48 0.0016 29.8 5.1 36 198-235 54-89 (376)
150 4a27_A Synaptic vesicle membra 33.7 28 0.00096 30.6 3.4 31 201-231 136-168 (349)
151 2xyq_A Putative 2'-O-methyl tr 33.6 48 0.0017 29.3 4.9 38 196-235 50-95 (290)
152 3dtn_A Putative methyltransfer 33.2 63 0.0021 25.9 5.2 34 196-229 32-66 (234)
153 3ege_A Putative methyltransfer 32.2 52 0.0018 27.3 4.7 35 193-227 20-54 (261)
154 3bzb_A Uncharacterized protein 32.2 34 0.0012 29.2 3.6 35 199-235 71-105 (281)
155 4eye_A Probable oxidoreductase 32.1 41 0.0014 29.5 4.2 33 201-235 153-187 (342)
156 3g5l_A Putative S-adenosylmeth 31.9 48 0.0016 27.1 4.3 32 197-228 34-65 (253)
157 1zsy_A Mitochondrial 2-enoyl t 31.0 44 0.0015 29.5 4.2 31 201-231 161-193 (357)
158 3uko_A Alcohol dehydrogenase c 30.8 35 0.0012 30.4 3.6 36 199-235 185-221 (378)
159 3jyn_A Quinone oxidoreductase; 30.7 44 0.0015 29.0 4.1 31 201-231 134-166 (325)
160 3gaz_A Alcohol dehydrogenase s 30.4 57 0.0019 28.6 4.8 31 201-231 144-176 (343)
161 2y1w_A Histone-arginine methyl 30.4 48 0.0016 29.4 4.3 32 197-228 40-71 (348)
162 2b3t_A Protein methyltransfera 29.4 63 0.0022 27.2 4.8 32 198-230 101-132 (276)
163 2yqz_A Hypothetical protein TT 29.0 41 0.0014 27.4 3.5 27 202-228 34-60 (263)
164 3q87_B N6 adenine specific DNA 28.9 27 0.00093 27.3 2.2 24 206-229 22-45 (170)
165 1b12_A Signal peptidase I; ser 28.8 66 0.0023 27.3 4.8 63 7-70 10-85 (248)
166 3qwb_A Probable quinone oxidor 28.6 49 0.0017 28.7 4.1 31 201-231 142-174 (334)
167 1p91_A Ribosomal RNA large sub 28.5 51 0.0017 27.3 4.0 25 206-230 84-108 (269)
168 4a2c_A Galactitol-1-phosphate 28.4 52 0.0018 28.5 4.2 37 197-233 150-187 (346)
169 2gb4_A Thiopurine S-methyltran 28.3 44 0.0015 28.4 3.6 26 203-228 64-89 (252)
170 3ccf_A Cyclopropane-fatty-acyl 28.3 51 0.0017 27.6 4.0 29 199-227 49-77 (279)
171 3dli_A Methyltransferase; PSI- 28.2 43 0.0015 27.3 3.4 27 202-228 36-62 (240)
172 3gms_A Putative NADPH:quinone 28.2 42 0.0014 29.3 3.5 31 201-231 138-170 (340)
173 2aot_A HMT, histamine N-methyl 28.2 64 0.0022 27.3 4.6 34 196-229 40-74 (292)
174 2f23_A Anti-cleavage anti-GREA 28.0 92 0.0031 24.8 5.3 60 8-69 75-142 (156)
175 1rjw_A ADH-HT, alcohol dehydro 28.0 66 0.0023 28.0 4.8 36 198-235 155-191 (339)
176 2h00_A Methyltransferase 10 do 27.8 52 0.0018 27.1 3.9 23 207-229 65-87 (254)
177 1o9g_A RRNA methyltransferase; 27.7 30 0.001 28.7 2.3 42 194-235 38-80 (250)
178 3ocj_A Putative exported prote 27.7 16 0.00054 31.5 0.6 57 178-235 89-146 (305)
179 3tm4_A TRNA (guanine N2-)-meth 27.3 53 0.0018 29.5 4.1 44 190-235 201-244 (373)
180 2p41_A Type II methyltransfera 27.2 63 0.0022 28.4 4.5 33 196-228 71-103 (305)
181 3jwh_A HEN1; methyltransferase 27.0 32 0.0011 27.6 2.3 30 200-229 22-51 (217)
182 4b7c_A Probable oxidoreductase 26.8 61 0.0021 28.1 4.3 36 198-235 139-177 (336)
183 2ftc_B Mitochondrial ribosomal 26.8 38 0.0013 27.1 2.7 16 18-33 94-109 (136)
184 3g07_A 7SK snRNA methylphospha 26.8 50 0.0017 28.3 3.7 27 206-232 45-71 (292)
185 3dou_A Ribosomal RNA large sub 26.4 76 0.0026 25.5 4.6 36 197-235 14-50 (191)
186 3j20_E 30S ribosomal protein S 26.4 70 0.0024 28.0 4.5 32 14-45 155-186 (243)
187 3plx_B Aspartate 1-decarboxyla 26.2 11 0.00039 28.9 -0.5 40 198-239 7-48 (102)
188 4e2x_A TCAB9; kijanose, tetron 26.1 56 0.0019 29.3 4.0 33 196-228 96-128 (416)
189 4hcz_A PHD finger protein 1; p 25.9 78 0.0027 21.8 3.7 23 16-39 3-25 (58)
190 2e5q_A PHD finger protein 19; 25.7 96 0.0033 21.7 4.2 27 13-40 4-30 (63)
191 2dgy_A MGC11102 protein; EIF-1 25.4 1.1E+02 0.0039 23.4 5.1 24 112-135 77-100 (111)
192 3bxo_A N,N-dimethyltransferase 25.1 84 0.0029 25.1 4.6 24 206-229 39-62 (239)
193 1rl2_A Protein (ribosomal prot 25.1 37 0.0013 27.2 2.3 27 18-47 107-133 (137)
194 4dup_A Quinone oxidoreductase; 25.1 64 0.0022 28.4 4.1 31 201-231 161-193 (353)
195 3cgg_A SAM-dependent methyltra 25.0 65 0.0022 24.5 3.8 24 205-228 44-67 (195)
196 1gu7_A Enoyl-[acyl-carrier-pro 24.4 63 0.0021 28.3 4.0 29 203-231 162-193 (364)
197 1i4w_A Mitochondrial replicati 24.0 79 0.0027 28.8 4.6 38 193-230 38-81 (353)
198 3e23_A Uncharacterized protein 24.0 45 0.0015 26.4 2.7 32 195-228 33-64 (211)
199 3q7e_A Protein arginine N-meth 23.7 34 0.0012 30.4 2.1 32 202-235 61-92 (349)
200 3ggd_A SAM-dependent methyltra 23.6 73 0.0025 25.8 4.0 27 204-230 53-79 (245)
201 2dq4_A L-threonine 3-dehydroge 23.6 72 0.0025 27.8 4.2 36 198-235 155-192 (343)
202 1g6q_1 HnRNP arginine N-methyl 23.4 41 0.0014 29.5 2.5 27 202-228 33-59 (328)
203 3jwg_A HEN1, methyltransferase 23.3 32 0.0011 27.5 1.7 33 197-229 19-51 (219)
204 4dvj_A Putative zinc-dependent 23.0 70 0.0024 28.3 4.0 34 201-235 160-200 (363)
205 3krt_A Crotonyl COA reductase; 23.0 51 0.0018 30.2 3.2 29 203-231 224-254 (456)
206 2wa2_A Non-structural protein 22.9 61 0.0021 28.1 3.5 33 196-228 71-103 (276)
207 1h2b_A Alcohol dehydrogenase; 22.7 69 0.0024 28.2 3.9 31 203-235 182-214 (359)
208 3a27_A TYW2, uncharacterized p 22.7 69 0.0024 27.2 3.8 33 202-235 114-146 (272)
209 2j3h_A NADP-dependent oxidored 22.7 77 0.0026 27.5 4.2 31 201-231 149-181 (345)
210 3opn_A Putative hemolysin; str 22.6 1.2E+02 0.004 25.3 5.2 38 196-235 25-63 (232)
211 3ofk_A Nodulation protein S; N 22.6 50 0.0017 26.2 2.7 30 199-228 43-72 (216)
212 1jvb_A NAD(H)-dependent alcoho 22.5 81 0.0028 27.5 4.3 34 198-231 161-197 (347)
213 1mjf_A Spermidine synthase; sp 22.2 83 0.0028 26.9 4.2 28 206-235 74-101 (281)
214 3fbg_A Putative arginate lyase 22.0 1.1E+02 0.0036 26.8 5.0 33 201-235 138-178 (346)
215 3cc8_A Putative methyltransfer 22.0 68 0.0023 25.2 3.4 30 198-228 24-53 (230)
216 2p4v_A Transcription elongatio 21.8 1.3E+02 0.0043 24.2 5.0 62 8-70 75-142 (158)
217 1nv8_A HEMK protein; class I a 21.6 69 0.0024 27.6 3.6 23 206-228 122-144 (284)
218 1x19_A CRTF-related protein; m 21.6 1.1E+02 0.0039 26.6 5.1 35 195-229 178-212 (359)
219 3sm3_A SAM-dependent methyltra 21.6 65 0.0022 25.5 3.2 24 205-228 28-51 (235)
220 3lst_A CALO1 methyltransferase 21.6 91 0.0031 27.2 4.4 35 196-230 173-207 (348)
221 2oxt_A Nucleoside-2'-O-methylt 21.5 67 0.0023 27.6 3.5 36 196-235 63-98 (265)
222 3kbg_A 30S ribosomal protein S 21.4 95 0.0033 26.7 4.3 31 15-45 116-146 (213)
223 3l8d_A Methyltransferase; stru 21.4 94 0.0032 24.9 4.2 32 195-228 43-74 (242)
224 4htf_A S-adenosylmethionine-de 20.8 1.1E+02 0.0038 25.4 4.7 32 196-228 58-89 (285)
225 3r8s_C 50S ribosomal protein L 20.6 95 0.0033 27.6 4.3 42 4-48 141-193 (271)
226 2c0c_A Zinc binding alcohol de 20.5 82 0.0028 27.8 3.9 31 201-231 157-189 (362)
227 1zx0_A Guanidinoacetate N-meth 20.4 52 0.0018 26.8 2.4 23 205-227 58-80 (236)
228 2nxc_A L11 mtase, ribosomal pr 20.4 1.1E+02 0.0036 25.6 4.4 28 205-235 118-145 (254)
229 1jsx_A Glucose-inhibited divis 20.4 99 0.0034 24.2 4.1 24 207-230 65-88 (207)
230 1yb5_A Quinone oxidoreductase; 20.3 1.2E+02 0.0039 26.7 4.9 31 201-231 164-196 (351)
231 2vn8_A Reticulon-4-interacting 20.3 1.1E+02 0.0038 27.0 4.8 32 202-235 174-211 (375)
232 2h6e_A ADH-4, D-arabinose 1-de 20.3 86 0.0029 27.3 4.0 27 204-231 168-197 (344)
233 1v3u_A Leukotriene B4 12- hydr 20.1 1.2E+02 0.004 26.1 4.8 31 201-231 139-171 (333)
234 2cf5_A Atccad5, CAD, cinnamyl 20.0 82 0.0028 27.7 3.8 35 198-235 170-207 (357)
No 1
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.31 E-value=5.2e-11 Score=102.65 Aligned_cols=121 Identities=17% Similarity=0.233 Sum_probs=101.4
Q ss_pred CccCCCEEEEEeCCCCeEEEEEEecCCEEEEceeeeecCcccCCCCCcEEEEeCCCCCCCccccCCCCcchhhhhhhhhc
Q 025480 16 LTWEGCSVLLDINDGDRLVFARLTSGSTLKIGNKNCSLQPLIGCPFGSLFQVDNGKEGPNLSRVIPSTEDDVQEKEDAQI 95 (252)
Q Consensus 16 ~I~eGd~Vll~~~~g~~~~~v~l~~~~~i~lgK~~f~~~~lIG~pyG~t~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (252)
||++||.|++..+++ +.+.+++.+| .+...+|.|.++++||++||..+....+.
T Consensus 1 ~~~~Gd~v~~~~~~~-~~~~~~~~~~-~~~~~~g~~~~~~~ig~~~g~~i~~~~g~------------------------ 54 (255)
T 3mb5_A 1 MIREGDKVVLVDPRG-KRYLITVSKR-DFHTDLGILKLEEIIGRNFGEAIKSHKGH------------------------ 54 (255)
T ss_dssp CCCTTCEEEEECTTS-CEEEEECCSS-EEEETTEEEEGGGGTTCCTTCEEECTTCC------------------------
T ss_pred CCCCCCEEEEEECCC-cEEEEEecCC-eEecCCEEEEHHHhcCCCCCcEEEECCCc------------------------
Confidence 689999999999875 6779999998 88888899999999999999988754332
Q ss_pred cccccCccccccCcccccCCHHHHHHHHHcCCChHHHHHHHHhcccccccchhhcHHHHHHHhhhccCCcEEEeCCChHH
Q 025480 96 SGEFRDNRAIVDDNKAQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFARS 175 (252)
Q Consensus 96 ~~~~~dNr~i~Dd~~~QkLs~eeI~eLK~~g~~g~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKyl~~~~vl~Pt~~~ 175 (252)
.+.+++|+...
T Consensus 55 ---------------------------------------------------------------------~~~~~~p~~~~ 65 (255)
T 3mb5_A 55 ---------------------------------------------------------------------EFKILRPRIVD 65 (255)
T ss_dssp ---------------------------------------------------------------------EEEEECCCHHH
T ss_pred ---------------------------------------------------------------------EEEEeCCCHHH
Confidence 25678888776
Q ss_pred HHHHHhhcCcchhcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 176 ICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 176 l~e~y~~k~P~Ki~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+. .+.+ ....+.++..++|+.++++.+|.+||.++.++|.++.++++++|+.+++
T Consensus 66 ~~~-~~~~---~~~~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v 121 (255)
T 3mb5_A 66 YLD-KMKR---GPQIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRV 121 (255)
T ss_dssp HHH-HSCC---CSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEE
T ss_pred HHh-hCcc---ccccccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEE
Confidence 665 3333 3345778889999999999999999999999999999999999888888
No 2
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.26 E-value=1.3e-10 Score=101.43 Aligned_cols=123 Identities=21% Similarity=0.249 Sum_probs=102.4
Q ss_pred CCccCCCEEEEEeCCCCeEEEEEEecCCEEEEceeeeecCcccCCCCCcEEEEeCCCCCCCccccCCCCcchhhhhhhhh
Q 025480 15 QLTWEGCSVLLDINDGDRLVFARLTSGSTLKIGNKNCSLQPLIGCPFGSLFQVDNGKEGPNLSRVIPSTEDDVQEKEDAQ 94 (252)
Q Consensus 15 ~~I~eGd~Vll~~~~g~~~~~v~l~~~~~i~lgK~~f~~~~lIG~pyG~t~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (252)
.+|++||+|+|..+.| .++++.+.+|..++..++.+..+++||++||++++...+.
T Consensus 5 ~~~~~Gd~v~~~~~~~-~~~~~~~~~g~~~~~~~g~~~~~~~ig~~~g~~v~~~~~~----------------------- 60 (280)
T 1i9g_A 5 GPFSIGERVQLTDAKG-RRYTMSLTPGAEFHTHRGSIAHDAVIGLEQGSVVKSSNGA----------------------- 60 (280)
T ss_dssp CSCCTTCEEEEEETTC-CEEEEECCTTCEEEETTEEEEHHHHTTCCTTEEEECSSCC-----------------------
T ss_pred CcCCCCCEEEEEECCC-CEEEEEECCCCeEEcCCceEEHHHhcCCCCceEEEecCCc-----------------------
Confidence 4599999999998876 5668899999999999999999999999999988743322
Q ss_pred ccccccCccccccCcccccCCHHHHHHHHHcCCChHHHHHHHHhcccccccchhhcHHHHHHHhhhccCCcEEEeCCChH
Q 025480 95 ISGEFRDNRAIVDDNKAQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFAR 174 (252)
Q Consensus 95 ~~~~~~dNr~i~Dd~~~QkLs~eeI~eLK~~g~~g~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKyl~~~~vl~Pt~~ 174 (252)
.+.+++|+..
T Consensus 61 ----------------------------------------------------------------------~~~~~~p~~~ 70 (280)
T 1i9g_A 61 ----------------------------------------------------------------------LFLVLRPLLV 70 (280)
T ss_dssp ----------------------------------------------------------------------EEEEECCCHH
T ss_pred ----------------------------------------------------------------------EEEEeCCCHH
Confidence 2467778765
Q ss_pred HHHHHHhhcCcchhcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 175 SICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 175 ~l~e~y~~k~P~Ki~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
. |+..-|.....+.+..+++++.++++++|.+||.++.++|.++.++++++|+.+++
T Consensus 71 ~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v 127 (280)
T 1i9g_A 71 D----YVMSMPRGPQVIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQV 127 (280)
T ss_dssp H----HHTTSCSCSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEE
T ss_pred H----HHhhccccceeecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEE
Confidence 3 33444555666788899999999999999999999999999999999999877777
No 3
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.16 E-value=5.1e-10 Score=98.40 Aligned_cols=124 Identities=16% Similarity=0.158 Sum_probs=102.3
Q ss_pred CCCccCCCEEEEEeCCCCeEEEEEEecCCEEEEceeeeecCcccCCCCCcEEEEeCCCCCCCccccCCCCcchhhhhhhh
Q 025480 14 AQLTWEGCSVLLDINDGDRLVFARLTSGSTLKIGNKNCSLQPLIGCPFGSLFQVDNGKEGPNLSRVIPSTEDDVQEKEDA 93 (252)
Q Consensus 14 ~~~I~eGd~Vll~~~~g~~~~~v~l~~~~~i~lgK~~f~~~~lIG~pyG~t~ei~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (252)
...|++||+|+|..+++ ..+.+++++|..++...+.+++++++|++||..|.+..+.
T Consensus 17 ~~~~~~gd~v~i~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~i~g~~~g~~~~~~~~~---------------------- 73 (277)
T 1o54_A 17 ADTLKPGDRVLLSFEDE-SEFLVDLEKDKKLHTHLGIIDLNEVFEKGPGEIIRTSAGK---------------------- 73 (277)
T ss_dssp GGCCCTTCEEEEEETTS-CEEEEECCTTCEEEETTEEEEHHHHTTSCTTCEEECTTCC----------------------
T ss_pred cCCCCCCCEEEEEECCC-cEEEEEEcCCCEEecCCceEEHHHhcCCCCCcEEEEcCCc----------------------
Confidence 34699999999999876 4668899999999999999999999999999988865332
Q ss_pred hccccccCccccccCcccccCCHHHHHHHHHcCCChHHHHHHHHhcccccccchhhcHHHHHHHhhhccCCcEEEeCCCh
Q 025480 94 QISGEFRDNRAIVDDNKAQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFA 173 (252)
Q Consensus 94 ~~~~~~~dNr~i~Dd~~~QkLs~eeI~eLK~~g~~g~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKyl~~~~vl~Pt~ 173 (252)
.+.+.+|+.
T Consensus 74 -----------------------------------------------------------------------~~~~~~p~~ 82 (277)
T 1o54_A 74 -----------------------------------------------------------------------KGYILIPSL 82 (277)
T ss_dssp -----------------------------------------------------------------------EEEEECCCH
T ss_pred -----------------------------------------------------------------------EEEEeCCCH
Confidence 246678888
Q ss_pred HHHHHHHhhcCcchhcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 174 RSICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 174 ~~l~e~y~~k~P~Ki~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
..+.+.+... ...+.+..+++++.++++.+|.+||.+++++|.++.++++++|..+++
T Consensus 83 ~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v 140 (277)
T 1o54_A 83 IDEIMNMKRR----TQIVYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKV 140 (277)
T ss_dssp HHHHHTCCC-----CCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEE
T ss_pred HHHHhhcccc----CCccCHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEE
Confidence 7776544332 234667778999999999999999999999999999999999877777
No 4
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.01 E-value=1.4e-09 Score=93.27 Aligned_cols=123 Identities=16% Similarity=0.136 Sum_probs=95.4
Q ss_pred CCccCCCEEEEEeCCCCeEEEEEEecCCEEEEceeeeecCcccCCCCCcEEEEeCCCCCCCccccCCCCcchhhhhhhhh
Q 025480 15 QLTWEGCSVLLDINDGDRLVFARLTSGSTLKIGNKNCSLQPLIGCPFGSLFQVDNGKEGPNLSRVIPSTEDDVQEKEDAQ 94 (252)
Q Consensus 15 ~~I~eGd~Vll~~~~g~~~~~v~l~~~~~i~lgK~~f~~~~lIG~pyG~t~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (252)
..|++||+|++..+++ +.+++++.+|..+....+.+..++++|.+||.++....+.
T Consensus 2 ~~~~~Gd~v~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~~g~----------------------- 57 (258)
T 2pwy_A 2 SHMAWPGPLLLKDRKG-RAYLVFPKEGGVFHHHKGSVPHEALLEAGPGGVVRTHLGE----------------------- 57 (258)
T ss_dssp ------CCEEEECTTC-CEEEECCCTTCEECCTTCCEEHHHHHHHCTTCEEECSTTC-----------------------
T ss_pred CCCCCCCEEEEEECCC-cEEEEEecCCCEEecCCceEEHHHhcCCCCCcEEEeCCCc-----------------------
Confidence 4689999999999876 4558889999999998999999999999999987754332
Q ss_pred ccccccCccccccCcccccCCHHHHHHHHHcCCChHHHHHHHHhcccccccchhhcHHHHHHHhhhccCCcEEEeCCChH
Q 025480 95 ISGEFRDNRAIVDDNKAQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFAR 174 (252)
Q Consensus 95 ~~~~~~dNr~i~Dd~~~QkLs~eeI~eLK~~g~~g~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKyl~~~~vl~Pt~~ 174 (252)
.|.+++|+..
T Consensus 58 ----------------------------------------------------------------------~~~~~~~~~~ 67 (258)
T 2pwy_A 58 ----------------------------------------------------------------------ELSVHRPTLE 67 (258)
T ss_dssp ----------------------------------------------------------------------EEEEECCCHH
T ss_pred ----------------------------------------------------------------------EEEEeCCCHH
Confidence 2456677655
Q ss_pred HHHHHHhhcCcchhcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 175 SICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 175 ~l~e~y~~k~P~Ki~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
. |+...+.....+.++.++.++.++++.+|.+||.++.+.|.++.++++++|..+++
T Consensus 68 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v 124 (258)
T 2pwy_A 68 E----YLLHMKRSATPTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLV 124 (258)
T ss_dssp H----HHHHSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEE
T ss_pred H----HhhcCccccccccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEE
Confidence 3 33444455566778888999999999999999999999999999999999866777
No 5
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.86 E-value=1.3e-08 Score=92.10 Aligned_cols=127 Identities=17% Similarity=0.197 Sum_probs=87.9
Q ss_pred CCCCCccCCCEEEEEeCCCC--eEEEEEEecCCEEEEceeeeecCcccCCCCCcEEEEeCCCCCCCccccCCCCcchhhh
Q 025480 12 RNAQLTWEGCSVLLDINDGD--RLVFARLTSGSTLKIGNKNCSLQPLIGCPFGSLFQVDNGKEGPNLSRVIPSTEDDVQE 89 (252)
Q Consensus 12 ~~~~~I~eGd~Vll~~~~g~--~~~~v~l~~~~~i~lgK~~f~~~~lIG~pyG~t~ei~~~~~~~~~~~~~~~~~~~~~~ 89 (252)
+...+|++||.|++..+++. ..+.+++++|+.++..+|.+..+++||++||+.|....+.
T Consensus 5 ~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ig~~~~~~~~~~~g~------------------ 66 (336)
T 2b25_A 5 SRERPFQAGELILAETGEGETKFKKLFRLNNFGLLNSNWGAVPFGKIVGKFPGQILRSSFGK------------------ 66 (336)
T ss_dssp ---CCCCTTCEEEEEC----CCCEEEEECCSSCBCC-----CBHHHHTTCCTTEEEECTTSC------------------
T ss_pred ccCCCCCCCCEEEEEeCCCCccceeeEEecCCCEEEcccCcEeHHHHcCCCCCceEEeCCCc------------------
Confidence 44557999999999877653 2568899999999999999999999999999988743322
Q ss_pred hhhhhccccccCccccccCcccccCCHHHHHHHHHcCCChHHHHHHHHhcccccccchhhcHHHHHHHhhhccCCcEEEe
Q 025480 90 KEDAQISGEFRDNRAIVDDNKAQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLR 169 (252)
Q Consensus 90 ~~~~~~~~~~~dNr~i~Dd~~~QkLs~eeI~eLK~~g~~g~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKyl~~~~vl 169 (252)
.+.+.
T Consensus 67 ---------------------------------------------------------------------------~~~~~ 71 (336)
T 2b25_A 67 ---------------------------------------------------------------------------QYMLR 71 (336)
T ss_dssp ---------------------------------------------------------------------------EEEEE
T ss_pred ---------------------------------------------------------------------------EEEec
Confidence 12344
Q ss_pred CCChHHHHHHHhhcCcchhcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 170 RPFARSICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 170 ~Pt~~~l~e~y~~k~P~Ki~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+|+..... ..-|......-+...++|+.+.++.+|.+||.+++++|.++.+++.++|..++|
T Consensus 72 ~p~~~~~~----~~~~~~~~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v 133 (336)
T 2b25_A 72 RPALEDYV----VLMKRGTAITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRV 133 (336)
T ss_dssp CCCHHHHH----HHSCCSSCCCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEE
T ss_pred CCCHHHHh----hhhcCCCcccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceE
Confidence 55543322 112222333556667889999999999999999999999999999998887887
No 6
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.45 E-value=8.2e-06 Score=69.16 Aligned_cols=110 Identities=18% Similarity=0.203 Sum_probs=88.0
Q ss_pred CccCCCEEEEEeCCCCeEEEEEEecCCEEEEceeeeecCcccCCCCCcEEEEeCCCCCCCccccCCCCcchhhhhhhhhc
Q 025480 16 LTWEGCSVLLDINDGDRLVFARLTSGSTLKIGNKNCSLQPLIGCPFGSLFQVDNGKEGPNLSRVIPSTEDDVQEKEDAQI 95 (252)
Q Consensus 16 ~I~eGd~Vll~~~~g~~~~~v~l~~~~~i~lgK~~f~~~~lIG~pyG~t~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (252)
++++||.|++.... ..+.+.+..|+.....+|.+.+.+++|.+||+.+ .
T Consensus 3 ~~~~Gd~V~~~~~~--~~~~~~~~~g~~~~~~~G~~~~~~~~g~~~G~~~-----~------------------------ 51 (248)
T 2yvl_A 3 SFKEGEYVLIRFGE--KKFLRKLLPKQSLSVKKSVLKFDEVIGKPEGVKI-----N------------------------ 51 (248)
T ss_dssp CCCTTCEEEEEETT--EEEEEECCTTCEEEETTEEEEGGGTTTCCTTEEE-----T------------------------
T ss_pred cCCCCCEEEEEeCC--eEEEEEEcCCCEEecCCceEEHHHhcCCCCCCEE-----E------------------------
Confidence 59999999998763 5667788899999998999999999999999865 0
Q ss_pred cccccCccccccCcccccCCHHHHHHHHHcCCChHHHHHHHHhcccccccchhhcHHHHHHHhhhccCCcEEEeCCChHH
Q 025480 96 SGEFRDNRAIVDDNKAQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFARS 175 (252)
Q Consensus 96 ~~~~~dNr~i~Dd~~~QkLs~eeI~eLK~~g~~g~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKyl~~~~vl~Pt~~~ 175 (252)
.+.+.+|+...
T Consensus 52 ---------------------------------------------------------------------~~~~~~p~~~~ 62 (248)
T 2yvl_A 52 ---------------------------------------------------------------------GFEVYRPTLEE 62 (248)
T ss_dssp ---------------------------------------------------------------------TEEEECCCHHH
T ss_pred ---------------------------------------------------------------------EEEEeCCCHHH
Confidence 13455677666
Q ss_pred HHHHHhhcCcchhcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 176 ICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 176 l~e~y~~k~P~Ki~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
+.+..+... ..-+.+...++++.++++.+|.+||+++.+.|.++.+++++
T Consensus 63 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~ 112 (248)
T 2yvl_A 63 IILLGFERK---TQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV 112 (248)
T ss_dssp HHHHTSCCS---SCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH
T ss_pred HHHhcCcCC---CCcccchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh
Confidence 665444332 12344677889999999999999999999999999999998
No 7
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=95.53 E-value=0.074 Score=46.07 Aligned_cols=40 Identities=18% Similarity=0.261 Sum_probs=30.1
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+.++.+.++.+|.+||.++.+.|.++..+++++++.+++
T Consensus 99 ~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v 138 (275)
T 1yb2_A 99 ASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTL 138 (275)
T ss_dssp -------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEE
T ss_pred HHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEE
Confidence 4677888899999999999999999999999998766666
No 8
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=92.16 E-value=0.19 Score=43.75 Aligned_cols=33 Identities=15% Similarity=0.229 Sum_probs=31.5
Q ss_pred cCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 203 GNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 203 anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
-+++||++||.++.++|..+..+++++|.+|+|
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V 105 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRI 105 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEE
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceE
Confidence 468999999999999999999999999999999
No 9
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=90.23 E-value=0.31 Score=39.28 Aligned_cols=42 Identities=17% Similarity=-0.088 Sum_probs=36.9
Q ss_pred HHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 194 DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
-.++..+..+.+++|.+||.++.+.|.++.++++++++.|++
T Consensus 9 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v 50 (197)
T 3eey_A 9 LGQSHDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRV 50 (197)
T ss_dssp HHHHHHHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEE
Confidence 346777778899999999999999999999999999877777
No 10
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=90.22 E-value=0.62 Score=37.95 Aligned_cols=45 Identities=16% Similarity=0.203 Sum_probs=39.5
Q ss_pred CCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 191 lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.++...+.++.+..+.+|.+||.++.+.|.++..++++.|..+++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v 105 (215)
T 2yxe_A 61 SAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLV 105 (215)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEE
T ss_pred CcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEE
Confidence 457778889999999999999999999999999999998765666
No 11
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=89.83 E-value=0.46 Score=41.16 Aligned_cols=39 Identities=15% Similarity=0.146 Sum_probs=33.7
Q ss_pred HHHHhh---cCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 197 SLLLSM---GNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 197 a~iL~~---anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+.|+.. .+++||.+||.++.+.|..+..+++++|..|+|
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V 104 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKA 104 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEE
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEE
Confidence 444443 348999999999999999999999999999999
No 12
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=88.74 E-value=0.8 Score=37.67 Aligned_cols=44 Identities=20% Similarity=0.220 Sum_probs=36.8
Q ss_pred CHHHHHHHHhhcC--CCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 192 RVDMLSLLLSMGN--VAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 192 R~DtLa~iL~~an--V~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+...+.++.+.. +.+|.+||.++.+.|.++..+++++|..++|
T Consensus 60 ~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v 105 (226)
T 1i1n_A 60 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKV 105 (226)
T ss_dssp CHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEE
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEE
Confidence 3555667777665 8899999999999999999999999877777
No 13
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=88.61 E-value=0.81 Score=37.67 Aligned_cols=45 Identities=20% Similarity=0.104 Sum_probs=37.8
Q ss_pred CCHHHHHHHHhhc--CCCCCCeEEEEeCCCcHHHHHHHHHhC----CCceE
Q 025480 191 LRVDMLSLLLSMG--NVAANSDVLVVDMAGGLLTGAVAERLG----GLEDY 235 (252)
Q Consensus 191 lR~DtLa~iL~~a--nV~~g~rvLv~d~~~Gll~aAvleRmg----g~G~i 235 (252)
.++.+.+.++.+. .+++|.+||.++++.|.++..++++++ ..++|
T Consensus 62 ~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v 112 (227)
T 2pbf_A 62 SAPHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYV 112 (227)
T ss_dssp CCHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEE
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEE
Confidence 3566777877766 699999999999999999999999887 56666
No 14
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=87.10 E-value=1.3 Score=36.85 Aligned_cols=44 Identities=11% Similarity=0.040 Sum_probs=38.3
Q ss_pred hcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCC
Q 025480 188 IGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGG 231 (252)
Q Consensus 188 i~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg 231 (252)
-.-...+.+..++...++.+|.+||.++++.|.++..++++.|.
T Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~ 60 (256)
T 1nkv_A 17 HNPFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGI 60 (256)
T ss_dssp SSSCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCC
T ss_pred cCCCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCC
Confidence 34456777889999999999999999999999999999998854
No 15
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=86.55 E-value=1.4 Score=35.73 Aligned_cols=44 Identities=5% Similarity=-0.062 Sum_probs=37.6
Q ss_pred CCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 191 lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+.+..+.++...++.+|.+||.++.+.|.++..++.+ ++.++|
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~-~~~~~v 67 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNL-MPNGRI 67 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHH-CTTSEE
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHH-CCCCEE
Confidence 55666689999999999999999999999999999887 555566
No 16
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=86.53 E-value=0.33 Score=39.93 Aligned_cols=53 Identities=11% Similarity=-0.040 Sum_probs=42.6
Q ss_pred cCcchhcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 183 KNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 183 k~P~Ki~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
..|.-...+.++....+..++...++.+||.++++.|..+.++++++++.++|
T Consensus 40 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v 92 (225)
T 3tr6_A 40 SFSTYAMQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTL 92 (225)
T ss_dssp HCTTGGGSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEE
T ss_pred hCCCCccccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEE
Confidence 44444456677776666667777889999999999999999999999877887
No 17
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=86.17 E-value=1.1 Score=37.44 Aligned_cols=43 Identities=19% Similarity=0.343 Sum_probs=37.6
Q ss_pred CCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 191 lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
..+...+.++.+.++.+|.+||.++++.|.++..++++.+ +++
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v 117 (235)
T 1jg1_A 75 SAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDV 117 (235)
T ss_dssp CCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCE
T ss_pred ccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEE
Confidence 4567788899999999999999999999999999999886 555
No 18
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=85.66 E-value=0.47 Score=39.10 Aligned_cols=49 Identities=14% Similarity=0.088 Sum_probs=39.2
Q ss_pred hhcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 187 RIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 187 Ki~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
....+.++....+..++...++.+||.++++.|..+.++++++++.++|
T Consensus 49 ~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v 97 (229)
T 2avd_A 49 GDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRV 97 (229)
T ss_dssp GGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEE
T ss_pred CCCccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEE
Confidence 3455566666666666777889999999999999999999988766777
No 19
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=85.03 E-value=0.5 Score=39.65 Aligned_cols=47 Identities=9% Similarity=0.024 Sum_probs=39.7
Q ss_pred cCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 189 GFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 189 ~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
..+.+.....|..++.+.++.+||.++++.|..+..++++++..++|
T Consensus 42 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v 88 (239)
T 2hnk_A 42 MQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKI 88 (239)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEE
T ss_pred cccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEE
Confidence 35667777778778888899999999999999999999998755666
No 20
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=84.55 E-value=0.84 Score=38.80 Aligned_cols=45 Identities=11% Similarity=-0.009 Sum_probs=35.9
Q ss_pred CC-HHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH---hCCCceE
Q 025480 191 LR-VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER---LGGLEDY 235 (252)
Q Consensus 191 lR-~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR---mgg~G~i 235 (252)
++ +++...|..+....++.+||.+++++|..+..++++ ++..++|
T Consensus 64 ~~~p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V 112 (236)
T 2bm8_A 64 LKDPDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQV 112 (236)
T ss_dssp CSCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEE
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEE
Confidence 44 666666666666667899999999999999999998 5777777
No 21
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=84.21 E-value=0.96 Score=37.29 Aligned_cols=36 Identities=19% Similarity=0.214 Sum_probs=31.6
Q ss_pred HhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 200 LSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 200 L~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+...++.+|.+||.++.+.|.++.++++++|..|+|
T Consensus 66 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v 101 (227)
T 1g8a_A 66 LKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKI 101 (227)
T ss_dssp CCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEE
T ss_pred HHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEE
Confidence 444568899999999999999999999999877888
No 22
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=84.00 E-value=1.3 Score=36.73 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=34.3
Q ss_pred CHHHHHHHHhhc--CCCCCCeEEEEeCCCcHHHHHHHHHhCC
Q 025480 192 RVDMLSLLLSMG--NVAANSDVLVVDMAGGLLTGAVAERLGG 231 (252)
Q Consensus 192 R~DtLa~iL~~a--nV~~g~rvLv~d~~~Gll~aAvleRmgg 231 (252)
.+...+.++.+. .+++|.+||.++++.|.++..+++++|.
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~ 108 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKA 108 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhccc
Confidence 456677777776 6899999999999999999999998874
No 23
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=84.00 E-value=0.53 Score=40.21 Aligned_cols=48 Identities=10% Similarity=-0.018 Sum_probs=40.2
Q ss_pred hcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 188 IGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 188 i~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
...+.++....+..++...++.+||.++++.|..+.+++++++..|+|
T Consensus 41 ~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v 88 (242)
T 3r3h_A 41 NMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQV 88 (242)
T ss_dssp GTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEE
T ss_pred CCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEE
Confidence 455667776666667777788999999999999999999999877888
No 24
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=83.89 E-value=1.4 Score=36.67 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=31.8
Q ss_pred HHHHHhh--cCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 196 LSLLLSM--GNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 196 La~iL~~--anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+.++.. .++++|.+||.++++.|.++..+++++| .|+|
T Consensus 44 ~~~~~~~l~~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V 84 (210)
T 1nt2_A 44 AAMILKGHRLKLRGDERVLYLGAASGTTVSHLADIVD-EGII 84 (210)
T ss_dssp HHHHHTSCCCCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEE
T ss_pred HHHHHhhcccCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEE
Confidence 3444443 5688999999999999999999999887 7787
No 25
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=83.75 E-value=1.7 Score=35.98 Aligned_cols=42 Identities=14% Similarity=0.188 Sum_probs=34.8
Q ss_pred HHHHHH---HhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 194 DMLSLL---LSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 194 DtLa~i---L~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
..++.+ +...++.+|.+||.++.+.|.++..++++.|+.++|
T Consensus 61 ~~~~~~~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v 105 (233)
T 2ipx_A 61 KLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLV 105 (233)
T ss_dssp HHHHHHHTTCSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEE
T ss_pred hHHHHHHhHHheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEE
Confidence 334444 346788999999999999999999999999877887
No 26
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=83.63 E-value=1.2 Score=37.13 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=33.6
Q ss_pred HHHHH---HhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 195 MLSLL---LSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 195 tLa~i---L~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.++.+ +...++.+|.+||.++.+.|.++..++++.| .|+|
T Consensus 59 ~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v 101 (230)
T 1fbn_A 59 LAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIAD-KGIV 101 (230)
T ss_dssp HHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEE
T ss_pred HHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEE
Confidence 34666 6667788999999999999999999999987 6677
No 27
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=83.41 E-value=0.39 Score=39.52 Aligned_cols=48 Identities=15% Similarity=0.067 Sum_probs=37.5
Q ss_pred hcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 188 IGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 188 i~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
++.+.+.+...+-.++...++.+||.++++.|..+.+++++++..++|
T Consensus 39 ~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v 86 (223)
T 3duw_A 39 AHDVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRV 86 (223)
T ss_dssp SCSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEE
T ss_pred CcccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEE
Confidence 344455555555556677889999999999999999999999756777
No 28
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=83.36 E-value=1.8 Score=34.95 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=34.7
Q ss_pred CCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 191 lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
..+...+.++.+.++.+|.+||.++++.|.++..++++
T Consensus 61 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~ 98 (210)
T 3lbf_A 61 SQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL 98 (210)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh
Confidence 36778899999999999999999999999999999887
No 29
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=81.47 E-value=3.3 Score=34.85 Aligned_cols=53 Identities=9% Similarity=-0.080 Sum_probs=40.0
Q ss_pred cCcchhcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 183 KNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 183 k~P~Ki~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
..+.-+..+.++.-..+-.++...++.+||.++++.|..+.++++++...|+|
T Consensus 46 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v 98 (237)
T 3c3y_A 46 SHPDSYMSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKI 98 (237)
T ss_dssp TSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEE
T ss_pred hcCCCCCCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEE
Confidence 33333555666665555555666778999999999999999999999767887
No 30
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=81.26 E-value=0.6 Score=39.74 Aligned_cols=44 Identities=16% Similarity=0.128 Sum_probs=35.0
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 192 RVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 192 R~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.......+-.++...++.+||.++++.|..+.++++++++.|+|
T Consensus 48 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v 91 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQL 91 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEE
T ss_pred CHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEE
Confidence 34444444445577889999999999999999999999877787
No 31
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=81.16 E-value=2.8 Score=36.93 Aligned_cols=44 Identities=11% Similarity=0.168 Sum_probs=37.5
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 192 RVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 192 R~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+..++.++...++++|.+||.++++.|.++..++++.+..|+|
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v 103 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLV 103 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEE
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEE
Confidence 34678889999999999999999999999999999886544666
No 32
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=80.45 E-value=2.9 Score=31.81 Aligned_cols=40 Identities=18% Similarity=0.191 Sum_probs=32.1
Q ss_pred HHHHHhhcC-CCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 196 LSLLLSMGN-VAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 196 La~iL~~an-V~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+..++...+ +.++.+||.++.+.|.++.++++++|..+++
T Consensus 10 l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v 50 (180)
T 1ej0_A 10 LDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRI 50 (180)
T ss_dssp HHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeE
Confidence 344555444 7899999999999999999999999765666
No 33
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=79.88 E-value=2.5 Score=35.51 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=32.2
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
|.+++...+.+++.+||.++++.|..+.+++++++..|+|
T Consensus 45 l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v 84 (221)
T 3dr5_A 45 LTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTL 84 (221)
T ss_dssp HHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEE
T ss_pred HHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEE
Confidence 4455555565666799999999999999999999877888
No 34
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=79.73 E-value=3.1 Score=33.59 Aligned_cols=51 Identities=16% Similarity=0.223 Sum_probs=39.8
Q ss_pred hcCcchhcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 182 KKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 182 ~k~P~Ki~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
..+|.+....+. ..++...++.++.+||.++.+.|.++.+++++.+..+++
T Consensus 15 ~~~~~~~~~~~~---~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v 65 (219)
T 3dh0_A 15 LDDPSRLELFDP---EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKV 65 (219)
T ss_dssp TSCGGGGGTCCH---HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEE
T ss_pred hcCHhhccccCH---HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEE
Confidence 445666555554 445566689999999999999999999999998777677
No 35
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=78.20 E-value=1.9 Score=37.17 Aligned_cols=36 Identities=14% Similarity=0.059 Sum_probs=33.0
Q ss_pred HHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhC
Q 025480 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 195 tLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmg 230 (252)
.+..++...++++|.+||.++.+.|.++..++++.|
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~ 95 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD 95 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC
Confidence 467788899999999999999999999999999987
No 36
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=77.47 E-value=4.9 Score=31.77 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=27.4
Q ss_pred hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCC
Q 025480 202 MGNVAANSDVLVVDMAGGLLTGAVAERLGGL 232 (252)
Q Consensus 202 ~anV~~g~rvLv~d~~~Gll~aAvleRmgg~ 232 (252)
+..+++|.+||.++.+.|.++.++++++|..
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~ 47 (196)
T 2nyu_A 17 HQILRPGLRVLDCGAAPGAWSQVAVQKVNAA 47 (196)
T ss_dssp HCCCCTTCEEEEETCCSCHHHHHHHHHTTTT
T ss_pred cCCCCCCCEEEEeCCCCCHHHHHHHHHhccc
Confidence 4457899999999999999999999999864
No 37
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=76.80 E-value=3.6 Score=34.54 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=34.6
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+..++...++.+|.+||.++.+.|.++..++++.|..+++
T Consensus 32 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v 71 (275)
T 3bkx_A 32 RLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHV 71 (275)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEE
Confidence 4566777789999999999999999999999998766676
No 38
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=76.74 E-value=2.8 Score=37.15 Aligned_cols=43 Identities=14% Similarity=-0.066 Sum_probs=36.0
Q ss_pred HHHHHHHH-hhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 193 VDMLSLLL-SMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 193 ~DtLa~iL-~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.|.-++++ .+.++.+|.+||.+..+.|..+..+++++++.|+|
T Consensus 103 qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v 146 (315)
T 1ixk_A 103 QEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVI 146 (315)
T ss_dssp CCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEE
T ss_pred eCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEE
Confidence 44456553 45689999999999999999999999999888888
No 39
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=76.53 E-value=3 Score=39.45 Aligned_cols=41 Identities=15% Similarity=0.045 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhC
Q 025480 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 190 ~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmg 230 (252)
..-+..++.|+..+++.+|.+||.++++.|.++..++++.|
T Consensus 225 et~p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g 265 (433)
T 1u2z_A 225 ELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECG 265 (433)
T ss_dssp CBCHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC
T ss_pred cccHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC
Confidence 34478899999999999999999999999999999998765
No 40
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=76.53 E-value=3.7 Score=36.64 Aligned_cols=36 Identities=19% Similarity=0.371 Sum_probs=32.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 193 ~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
...+..|+..+++.+|.+||.++.+.|.+|..++++
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~ 71 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN 71 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc
Confidence 345788999999999999999999999999999998
No 41
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=76.20 E-value=2 Score=36.55 Aligned_cols=37 Identities=16% Similarity=0.086 Sum_probs=32.5
Q ss_pred HHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCC
Q 025480 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGG 231 (252)
Q Consensus 195 tLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg 231 (252)
.+..++...++.+|.+||.++.+.|.++..++++.|.
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~ 88 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV 88 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC
Confidence 4567888889999999999999999999999988764
No 42
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=75.86 E-value=4.5 Score=33.08 Aligned_cols=39 Identities=18% Similarity=0.228 Sum_probs=34.4
Q ss_pred CCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 191 lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
..+..++.++...++.++.+||.++.+.|.++..++++.
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~ 92 (231)
T 1vbf_A 54 TALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV 92 (231)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc
Confidence 456778889999999999999999999999999998873
No 43
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=75.30 E-value=6.8 Score=33.27 Aligned_cols=52 Identities=13% Similarity=0.024 Sum_probs=38.8
Q ss_pred CcchhcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 184 NPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 184 ~P~Ki~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+.-+..+.+++-..+-.++...++.+||.++++.|..+.++++++...|+|
T Consensus 56 ~~~~~~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v 107 (247)
T 1sui_A 56 HPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKI 107 (247)
T ss_dssp STTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEE
Confidence 3333455566665555555566678899999999999999999999766777
No 44
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=75.08 E-value=2.2 Score=33.13 Aligned_cols=42 Identities=7% Similarity=-0.052 Sum_probs=34.2
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 193 ~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+..+.++....+.+|.+||.++.+.|.++..++++.+ .+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v 52 (178)
T 3hm2_A 11 QHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTA 52 (178)
T ss_dssp HHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEE
T ss_pred HHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeE
Confidence 34457778888999999999999999999999998873 3455
No 45
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=74.96 E-value=4.2 Score=35.85 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=35.3
Q ss_pred HHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCC-CceE
Q 025480 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGG-LEDY 235 (252)
Q Consensus 194 DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg-~G~i 235 (252)
..+..|+..+++.+|.+||.++.+.|.+|.+++++.+. .|+|
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V 71 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPL 71 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCE
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeE
Confidence 44677888899999999999999999999999998654 2555
No 46
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=74.53 E-value=2.8 Score=37.52 Aligned_cols=40 Identities=23% Similarity=0.096 Sum_probs=34.1
Q ss_pred HHHHHh-hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 196 LSLLLS-MGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 196 La~iL~-~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
-+|++. +.++++|.+||-+..+.|-.|..++++|++.|+|
T Consensus 90 ~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V 130 (309)
T 2b9e_A 90 ASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKI 130 (309)
T ss_dssp GGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEE
Confidence 355443 5689999999999999999999999999988988
No 47
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=74.31 E-value=2.5 Score=36.67 Aligned_cols=38 Identities=16% Similarity=0.125 Sum_probs=33.1
Q ss_pred HHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCC
Q 025480 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGG 231 (252)
Q Consensus 194 DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg 231 (252)
..+..++...++.+|.+||.++.+.|.++..++++.|.
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~ 114 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV 114 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC
Confidence 34667888889999999999999999999999998754
No 48
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=74.18 E-value=2.2 Score=35.18 Aligned_cols=47 Identities=13% Similarity=-0.122 Sum_probs=36.9
Q ss_pred cCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 189 GFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 189 ~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
..+.+++...+..++...++.+||.++++.|..+..++++++..++|
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v 86 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARL 86 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEE
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEE
Confidence 45566666666666677788999999999999999999988766777
No 49
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=74.06 E-value=2.7 Score=34.73 Aligned_cols=45 Identities=20% Similarity=0.163 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 190 ~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.++++....+..++...++.+||.++++.|..+.+++++++ .++|
T Consensus 37 ~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v 81 (233)
T 2gpy_A 37 IMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATI 81 (233)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEE
T ss_pred CcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEE
Confidence 46677777777777888999999999999999999999875 3555
No 50
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=74.03 E-value=3.9 Score=33.55 Aligned_cols=38 Identities=11% Similarity=-0.026 Sum_probs=33.0
Q ss_pred CCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 191 lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
.+.+..+.++...++.+|.+||.++.+.|.++..++.+
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~ 76 (204)
T 3njr_A 39 TKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA 76 (204)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT
T ss_pred CcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc
Confidence 34555678888999999999999999999999999887
No 51
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=73.99 E-value=4.2 Score=32.41 Aligned_cols=40 Identities=18% Similarity=0.043 Sum_probs=32.0
Q ss_pred HHHHHhhcC-CCCCCeEEEEeCCCcHHHHHHHHHhCC-CceE
Q 025480 196 LSLLLSMGN-VAANSDVLVVDMAGGLLTGAVAERLGG-LEDY 235 (252)
Q Consensus 196 La~iL~~an-V~~g~rvLv~d~~~Gll~aAvleRmgg-~G~i 235 (252)
|.+++..-+ +++|.+||.++++.|.++..++++++. .++|
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v 51 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKI 51 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEE
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceE
Confidence 445554434 689999999999999999999999875 5677
No 52
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=73.95 E-value=3.8 Score=33.91 Aligned_cols=38 Identities=24% Similarity=0.183 Sum_probs=33.6
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhC
Q 025480 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 193 ~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmg 230 (252)
.+.+..++...++.+|.+||.++.+.|.++..++++.|
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~ 78 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYG 78 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcC
Confidence 45567888888999999999999999999999999884
No 53
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=73.36 E-value=1.7 Score=36.42 Aligned_cols=46 Identities=15% Similarity=0.076 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 190 ~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+.++....+..++...++.+||.++++.|..+.+++++++..|+|
T Consensus 55 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v 100 (232)
T 3cbg_A 55 QISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQI 100 (232)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEE
T ss_pred CcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEE
Confidence 4566666666556667788999999999999999999998756677
No 54
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=73.31 E-value=4.2 Score=31.56 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=32.6
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 190 ~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
..+......++...++.++.+||.++.+.|.++..++++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~ 55 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV 55 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc
Confidence 3445556677778899999999999999999998888765
No 55
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=71.88 E-value=3.5 Score=39.23 Aligned_cols=43 Identities=21% Similarity=0.119 Sum_probs=35.7
Q ss_pred HHHHHHHHh-hcCCC--CCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 193 VDMLSLLLS-MGNVA--ANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 193 ~DtLa~iL~-~anV~--~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.|.-+|++. ..++. +|.+||-+..+.|..|..++++|++.|.|
T Consensus 100 Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V 145 (479)
T 2frx_A 100 QEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAI 145 (479)
T ss_dssp CCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEE
T ss_pred ECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEE
Confidence 444566653 55777 99999999999999999999999988888
No 56
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=71.04 E-value=6.3 Score=33.47 Aligned_cols=37 Identities=8% Similarity=0.180 Sum_probs=32.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 193 ~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
...+..|+..+++.+|.+||.++.+.|.++..++++.
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~ 52 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC 52 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC
Confidence 4456788889999999999999999999999999873
No 57
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=70.67 E-value=4 Score=38.05 Aligned_cols=43 Identities=19% Similarity=0.073 Sum_probs=36.0
Q ss_pred HHHHHHHHh-hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 193 VDMLSLLLS-MGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 193 ~DtLa~iL~-~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.|.-++++. +.++.+|.+||.+..+.|..+..++++|++.|+|
T Consensus 244 qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v 287 (450)
T 2yxl_A 244 QEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKI 287 (450)
T ss_dssp CCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEE
T ss_pred cCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEE
Confidence 355566644 5689999999999999999999999999887887
No 58
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=70.01 E-value=3.9 Score=35.24 Aligned_cols=34 Identities=18% Similarity=0.026 Sum_probs=31.2
Q ss_pred hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 202 MGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 202 ~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+.++.+|.+||.+..+.|..+..+++++++.|+|
T Consensus 78 ~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v 111 (274)
T 3ajd_A 78 VLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTI 111 (274)
T ss_dssp HHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEE
T ss_pred HhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEE
Confidence 4588999999999999999999999999888888
No 59
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=69.56 E-value=3.1 Score=36.14 Aligned_cols=36 Identities=14% Similarity=0.116 Sum_probs=31.9
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 193 ~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
...+..|+..+++.+|.+||.++.+.|.+|..++++
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~ 50 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE 50 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh
Confidence 345677889999999999999999999999999886
No 60
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=69.02 E-value=5.2 Score=34.44 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=31.6
Q ss_pred HHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 194 DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
..+..|+..+++.+|.+||.++.+.|.+|.+++++
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~ 52 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH 52 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc
Confidence 45677888999999999999999999999999987
No 61
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=68.57 E-value=3.5 Score=30.61 Aligned_cols=41 Identities=27% Similarity=0.298 Sum_probs=32.2
Q ss_pred cccCccccccCccc-ccCCHHHHHHHHHcCCChHHHHHHHHh
Q 025480 98 EFRDNRAIVDDNKA-QCLSGEDIDEMRRQGATGEEIVEALIA 138 (252)
Q Consensus 98 ~~~dNr~i~Dd~~~-QkLs~eeI~eLK~~g~~g~eII~~Lve 138 (252)
...-|++|.|.++. -.=-..+|-+|-++|.|-+||++-|++
T Consensus 30 p~Cqnqsi~dSna~iA~dlR~~V~~~l~~G~sd~eI~~~~v~ 71 (84)
T 2hl7_A 30 PKCQNQDIADSNAPIAADLRKQIYGQLQQGKSDGEIVDYMVA 71 (84)
T ss_dssp TTSSSCBTTTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred CCCCCCchhhcCcHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 44578899888862 223367888999999999999999994
No 62
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=68.36 E-value=4.3 Score=38.52 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=31.6
Q ss_pred hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 202 MGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 202 ~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+.++.+|.+||-+..+.|..|.+++++|++.|.|
T Consensus 100 ~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V 133 (456)
T 3m4x_A 100 AAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLL 133 (456)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEE
T ss_pred HcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEE
Confidence 4589999999999999999999999999999998
No 63
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=68.10 E-value=5.4 Score=35.04 Aligned_cols=35 Identities=23% Similarity=0.162 Sum_probs=31.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 193 ~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
...+..|+..+++.+| +||.++.+.|.+|.+++++
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~ 67 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA 67 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc
Confidence 4456788899999999 9999999999999999987
No 64
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=67.75 E-value=4.6 Score=38.46 Aligned_cols=39 Identities=23% Similarity=0.198 Sum_probs=33.6
Q ss_pred HHHH-hhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 197 SLLL-SMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 197 a~iL-~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
||++ .+.++.+|.+||-+..+.|..+..++++|++.|.|
T Consensus 90 s~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V 129 (464)
T 3m6w_A 90 AQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLL 129 (464)
T ss_dssp THHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEE
T ss_pred HHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEE
Confidence 4443 35589999999999999999999999999999988
No 65
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=65.45 E-value=7.8 Score=33.47 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=31.3
Q ss_pred HHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 194 DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
..+..|+..+++.+|.+||.++.+.|.+|. +++ ++.++|
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~--l~~-~~~~~v 46 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE--PVG-ERLDQL 46 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH--HHH-TTCSCE
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH--hhh-CCCCeE
Confidence 456788888999999999999999999999 455 444335
No 66
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=62.78 E-value=15 Score=30.28 Aligned_cols=41 Identities=12% Similarity=0.069 Sum_probs=33.3
Q ss_pred CCHHHHHHHHhhc-CCCCCCeEEEEeCCCcHHHHHHHHHhCC
Q 025480 191 LRVDMLSLLLSMG-NVAANSDVLVVDMAGGLLTGAVAERLGG 231 (252)
Q Consensus 191 lR~DtLa~iL~~a-nV~~g~rvLv~d~~~Gll~aAvleRmgg 231 (252)
...+....++.+. ++.+|.+||.++.+.|.++..++++.++
T Consensus 29 ~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~ 70 (257)
T 3f4k_A 29 GSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKG 70 (257)
T ss_dssp CCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS
T ss_pred CCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC
Confidence 3455666666655 8899999999999999999999998753
No 67
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=62.67 E-value=5.6 Score=31.28 Aligned_cols=33 Identities=21% Similarity=0.052 Sum_probs=27.3
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
++..+....+.+|.+||.++.+.|.++..++++
T Consensus 11 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~ 43 (185)
T 3mti_A 11 MSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL 43 (185)
T ss_dssp HHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh
Confidence 444455567899999999999999999999887
No 68
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=62.59 E-value=11 Score=31.45 Aligned_cols=35 Identities=17% Similarity=0.113 Sum_probs=30.5
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhC
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmg 230 (252)
+..++...++.+|.+||.++.+.|.++..++++.|
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~ 84 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARD 84 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcC
Confidence 45677788999999999999999999999998864
No 69
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=61.76 E-value=19 Score=30.08 Aligned_cols=38 Identities=16% Similarity=0.024 Sum_probs=31.6
Q ss_pred CCHHHHHHHHhhcC-CCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 191 LRVDMLSLLLSMGN-VAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 191 lR~DtLa~iL~~an-V~~g~rvLv~d~~~Gll~aAvleR 228 (252)
...+.+..++.+.. +.+|.+||.++++.|.++..++++
T Consensus 29 ~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~ 67 (267)
T 3kkz_A 29 GSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH 67 (267)
T ss_dssp CCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT
T ss_pred CCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc
Confidence 44556666777665 889999999999999999999988
No 70
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=60.89 E-value=5 Score=32.51 Aligned_cols=44 Identities=14% Similarity=-0.026 Sum_probs=30.3
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 192 RVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 192 R~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
++++...+-.++...++.+||.++++.|..+.++++++...++|
T Consensus 41 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v 84 (210)
T 3c3p_A 41 DRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRV 84 (210)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEE
T ss_pred CHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEE
Confidence 33333333333444567899999999999999999888655666
No 71
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=60.80 E-value=6.7 Score=32.59 Aligned_cols=45 Identities=13% Similarity=0.050 Sum_probs=34.9
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 190 ~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+.++....+..++...++.+||.++++.|..+.+++++ +..++|
T Consensus 54 ~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~-~~~~~v 98 (232)
T 3ntv_A 54 IVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASI-SDDIHV 98 (232)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTT-CTTCEE
T ss_pred CcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHh-CCCCEE
Confidence 355666677777777788999999999999999999883 335566
No 72
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=59.88 E-value=16 Score=27.92 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHH
Q 025480 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAE 227 (252)
Q Consensus 190 ~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvle 227 (252)
.........++....+.++.+||.++.+.|.++..+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~ 55 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK 55 (183)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT
T ss_pred cCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh
Confidence 34455567777888899999999999999999988887
No 73
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=59.74 E-value=10 Score=32.94 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=32.2
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 193 ~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
...+..|+..+++.++.+||.++.+.|.+|.+++++
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~ 49 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK 49 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh
Confidence 445778888999999999999999999999999987
No 74
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=59.47 E-value=12 Score=30.70 Aligned_cols=40 Identities=18% Similarity=0.076 Sum_probs=33.6
Q ss_pred CCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhC
Q 025480 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 191 lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmg 230 (252)
.+......++......++.+||.++.+.|.++..++++..
T Consensus 17 ~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~ 56 (259)
T 2p35_A 17 ERTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYG 56 (259)
T ss_dssp GGGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCC
Confidence 3445566788888889999999999999999999999873
No 75
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=59.30 E-value=6.8 Score=33.33 Aligned_cols=36 Identities=14% Similarity=-0.004 Sum_probs=30.3
Q ss_pred HHHHHhhc----CCCCCCeEEEEeCCCcHHHHHHHHHhCC
Q 025480 196 LSLLLSMG----NVAANSDVLVVDMAGGLLTGAVAERLGG 231 (252)
Q Consensus 196 La~iL~~a----nV~~g~rvLv~d~~~Gll~aAvleRmgg 231 (252)
+..++... ++.++.+||.++.+.|.++..++++.|.
T Consensus 67 ~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~ 106 (297)
T 2o57_A 67 DEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGV 106 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCC
T ss_pred HHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCC
Confidence 45566655 8999999999999999999999998754
No 76
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=57.90 E-value=14 Score=32.73 Aligned_cols=47 Identities=21% Similarity=0.191 Sum_probs=40.1
Q ss_pred cCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 189 GFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 189 ~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.-|+....+.|+.+++..++.++|....++|.++..++.+.|..+.|
T Consensus 185 a~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v 231 (354)
T 3tma_A 185 GSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPV 231 (354)
T ss_dssp CSCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCE
T ss_pred CCcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceE
Confidence 45777788889999999999999999999999999888887655555
No 77
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=56.51 E-value=14 Score=35.11 Aligned_cols=40 Identities=10% Similarity=0.093 Sum_probs=34.7
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCC
Q 025480 192 RVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGG 231 (252)
Q Consensus 192 R~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg 231 (252)
-++.+..|+..+++++|.+||-++++.|-++.+++.+.|.
T Consensus 158 ~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~ 197 (438)
T 3uwp_A 158 SFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNC 197 (438)
T ss_dssp HHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCC
Confidence 3567999999999999999999999999998888876553
No 78
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=56.41 E-value=9.1 Score=32.96 Aligned_cols=32 Identities=16% Similarity=0.054 Sum_probs=27.5
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCc-eE
Q 025480 204 NVAANSDVLVVDMAGGLLTGAVAERLGGLE-DY 235 (252)
Q Consensus 204 nV~~g~rvLv~d~~~Gll~aAvleRmgg~G-~i 235 (252)
.++||++||.++.+.|.++.+++++++..| +|
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v 99 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKI 99 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEE
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEE
Confidence 489999999999999999999999887655 44
No 79
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=55.88 E-value=10 Score=33.04 Aligned_cols=35 Identities=20% Similarity=0.182 Sum_probs=31.0
Q ss_pred HHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 194 DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
+-+..++.+.++.+|.+||.++.+.|.++..++++
T Consensus 32 ~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~ 66 (261)
T 3iv6_A 32 SDRENDIFLENIVPGSTVAVIGASTRFLIEKALER 66 (261)
T ss_dssp CHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc
Confidence 34577888889999999999999999999999886
No 80
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=55.14 E-value=16 Score=31.15 Aligned_cols=44 Identities=16% Similarity=0.159 Sum_probs=34.9
Q ss_pred CHHHHHHHHh-hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 192 RVDMLSLLLS-MGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 192 R~DtLa~iL~-~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+.+.+..++. +..+.++.+||.++++.|.++..++++..+..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v 50 (284)
T 3gu3_A 6 NDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKY 50 (284)
T ss_dssp CHHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEE
T ss_pred chHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEE
Confidence 4566677765 4478899999999999999999999988654555
No 81
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=54.13 E-value=9.7 Score=31.67 Aligned_cols=34 Identities=29% Similarity=0.451 Sum_probs=28.9
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
+..++.+.++.++.+||.++.+.|.++..++++.
T Consensus 26 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~ 59 (260)
T 1vl5_A 26 LAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV 59 (260)
T ss_dssp HHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS
T ss_pred HHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC
Confidence 5667777788999999999999999998888764
No 82
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=53.85 E-value=14 Score=30.92 Aligned_cols=39 Identities=18% Similarity=0.014 Sum_probs=29.6
Q ss_pred HHHH-HhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 196 LSLL-LSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 196 La~i-L~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+..+ .....+.+|.+||.++++.|.++..++++. +.+++
T Consensus 25 l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v 64 (276)
T 3mgg_A 25 LEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEI 64 (276)
T ss_dssp HHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHC-TTSEE
T ss_pred HHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhC-CCCEE
Confidence 4444 445667899999999999999999999884 33455
No 83
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=53.38 E-value=17 Score=31.37 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=30.2
Q ss_pred HHHHHhhcC-CCCCCeEEEEeCCCcHHHHHHHHHhC
Q 025480 196 LSLLLSMGN-VAANSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 196 La~iL~~an-V~~g~rvLv~d~~~Gll~aAvleRmg 230 (252)
...++.+.. +.+|.+||.++.+.|.++..++++.|
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~ 140 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG 140 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC
Confidence 355777776 99999999999999999999999875
No 84
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=53.03 E-value=14 Score=28.49 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=29.2
Q ss_pred HHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 195 tLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
....|+.+....++.+||.++.+.|.++.+++++
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~ 73 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADE 73 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc
Confidence 4566777888889999999999999999888877
No 85
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=51.79 E-value=36 Score=30.14 Aligned_cols=45 Identities=16% Similarity=0.090 Sum_probs=36.6
Q ss_pred CCHHHHHHHHhhcCCCCCCeEEEEeC-------CCc--HHHHHHHHHhCCCceE
Q 025480 191 LRVDMLSLLLSMGNVAANSDVLVVDM-------AGG--LLTGAVAERLGGLEDY 235 (252)
Q Consensus 191 lR~DtLa~iL~~anV~~g~rvLv~d~-------~~G--ll~aAvleRmgg~G~i 235 (252)
...+.|..-|.-.+|++|+.+||=-+ ++| .|..|+++.+|.+|+|
T Consensus 13 ~T~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTL 66 (273)
T 2nyg_A 13 RTKQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTI 66 (273)
T ss_dssp BCHHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEE
T ss_pred cCHHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeE
Confidence 34566888888889999999998654 455 4678889999999999
No 86
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=50.82 E-value=14 Score=32.90 Aligned_cols=39 Identities=10% Similarity=0.003 Sum_probs=32.7
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+..++.+.++++|++||.+..+.|-.+.+++++++ .|+|
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~V 53 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRI 53 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEE
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEE
Confidence 45666677899999999999999999999999985 4666
No 87
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=50.47 E-value=20 Score=31.41 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=29.3
Q ss_pred HHHhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
+.|..+++++|.+|||.+.++ |+++..++..+|- +|
T Consensus 157 ~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~V 193 (340)
T 3s2e_A 157 KGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL--RV 193 (340)
T ss_dssp HHHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC--EE
T ss_pred HHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC--eE
Confidence 456778999999999998643 8899999998875 55
No 88
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=49.87 E-value=11 Score=32.59 Aligned_cols=31 Identities=16% Similarity=0.023 Sum_probs=24.1
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 204 NVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 204 nV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
-|.+|.+|+.+++++|.++.+++.+ |..++|
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V 48 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQM-GYCDFA 48 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHT-TCEEEE
T ss_pred hCCCCCEEEEECCchHHHHHHHHHh-CCCCEE
Confidence 4578999999999999999988875 433333
No 89
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=49.68 E-value=14 Score=30.42 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.7
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
...++.+.+++++.+||.++.+.|.++.+++++.
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~ 43 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV 43 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS
T ss_pred cchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC
Confidence 5677888899999999999999999998888763
No 90
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=49.37 E-value=8.6 Score=28.92 Aligned_cols=41 Identities=24% Similarity=0.349 Sum_probs=32.2
Q ss_pred cccCccccccCccc-ccCCHHHHHHHHHcCCChHHHHHHHHh
Q 025480 98 EFRDNRAIVDDNKA-QCLSGEDIDEMRRQGATGEEIVEALIA 138 (252)
Q Consensus 98 ~~~dNr~i~Dd~~~-QkLs~eeI~eLK~~g~~g~eII~~Lve 138 (252)
...-|++|.|.++. -.=-..+|-+|-++|.|-+||++-|++
T Consensus 27 pvCqnqsI~dSnA~iA~dlR~~Vre~l~~G~Sd~eI~~~mv~ 68 (90)
T 2kw0_A 27 PKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVA 68 (90)
T ss_dssp SCTTSCTTTSCCCHHHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred CCCCCCchhhcCcHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 34578899888863 223367888999999999999999995
No 91
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=48.89 E-value=18 Score=33.18 Aligned_cols=42 Identities=14% Similarity=-0.085 Sum_probs=34.7
Q ss_pred HHHHHHHHh-hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 193 VDMLSLLLS-MGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 193 ~DtLa~iL~-~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.|..++++. +.++++|.+||.+..+.|..+..+++++++ |.|
T Consensus 231 qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v 273 (429)
T 1sqg_A 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQV 273 (429)
T ss_dssp CCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEE
T ss_pred eCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEE
Confidence 455566554 568999999999999999999999999865 777
No 92
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=48.43 E-value=12 Score=32.78 Aligned_cols=35 Identities=17% Similarity=0.213 Sum_probs=30.5
Q ss_pred HHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 194 DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
..+..|+..+++.+|.+||.++.+.|.++.+++++
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~ 63 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL 63 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc
Confidence 44677788889999999999999999999999876
No 93
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=48.35 E-value=17 Score=32.72 Aligned_cols=37 Identities=22% Similarity=0.114 Sum_probs=28.4
Q ss_pred HHHhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
+.|..+++++|.+|||.+.+. |++++.+|..+|. ++|
T Consensus 176 ~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~V 213 (398)
T 2dph_A 176 HGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGA-ACV 213 (398)
T ss_dssp HHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEE
T ss_pred HHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEE
Confidence 445678999999999998633 6888888888863 355
No 94
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=48.05 E-value=29 Score=28.03 Aligned_cols=37 Identities=3% Similarity=-0.060 Sum_probs=28.3
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEEeCC-CcHHHHHHHHHh
Q 025480 192 RVDMLSLLLSMGNVAANSDVLVVDMA-GGLLTGAVAERL 229 (252)
Q Consensus 192 R~DtLa~iL~~anV~~g~rvLv~d~~-~Gll~aAvleRm 229 (252)
|+++- .++...-+.+|.+||.++++ .|.++.+++++.
T Consensus 41 ~~~~~-~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~ 78 (230)
T 3evz_A 41 TPISR-YIFLKTFLRGGEVALEIGTGHTAMMALMAEKFF 78 (230)
T ss_dssp CHHHH-HHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHH
T ss_pred CCchh-hhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhc
Confidence 44442 22234457899999999999 999999999987
No 95
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=47.93 E-value=23 Score=31.13 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=28.2
Q ss_pred HHHhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
+.|..+++++|.+|||.+.+. |+++..+|..+|- +|
T Consensus 167 ~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~V 203 (348)
T 3two_A 167 SPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA--EV 203 (348)
T ss_dssp HHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC--EE
T ss_pred HHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC--eE
Confidence 455677999999999998633 7888888888875 56
No 96
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=47.83 E-value=8.1 Score=32.46 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=30.7
Q ss_pred HHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 195 tLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
.+..|+..+++.+|.+||.++.+.|.++..++++
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~ 50 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI 50 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh
Confidence 3577888889999999999999999999999988
No 97
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=47.74 E-value=40 Score=29.82 Aligned_cols=44 Identities=16% Similarity=0.161 Sum_probs=36.0
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEEeC-------CCc--HHHHHHHHHhCCCceE
Q 025480 192 RVDMLSLLLSMGNVAANSDVLVVDM-------AGG--LLTGAVAERLGGLEDY 235 (252)
Q Consensus 192 R~DtLa~iL~~anV~~g~rvLv~d~-------~~G--ll~aAvleRmgg~G~i 235 (252)
..+.|..-|.-.+|++|+.+||=-+ ++| .|..|+++.||.+|+|
T Consensus 16 t~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTL 68 (268)
T 3ijw_A 16 TIKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTI 68 (268)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEE
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeE
Confidence 3566888888899999999998755 334 4577999999999999
No 98
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=47.71 E-value=14 Score=32.25 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=26.9
Q ss_pred HHHhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
+.+..+++++|.+|||.+.++ |++++.+|.++||. +|
T Consensus 154 ~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~-~V 191 (348)
T 4eez_A 154 KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGA-KV 191 (348)
T ss_dssp HHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCC-EE
T ss_pred eeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCC-EE
Confidence 456678999999999998744 45666667667663 44
No 99
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=47.67 E-value=11 Score=31.49 Aligned_cols=25 Identities=20% Similarity=0.147 Sum_probs=21.8
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhC
Q 025480 206 AANSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 206 ~~g~rvLv~d~~~Gll~aAvleRmg 230 (252)
.+|+|||.++.+.|..+..++++.+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~ 83 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI 83 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC
Confidence 6899999999999999988887643
No 100
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=47.23 E-value=14 Score=33.25 Aligned_cols=33 Identities=12% Similarity=0.047 Sum_probs=29.0
Q ss_pred cCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 203 GNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 203 anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+++.+|.+||.++++.|.++..++++.|..++|
T Consensus 79 ~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v 111 (383)
T 4fsd_A 79 DGSLEGATVLDLGCGTGRDVYLASKLVGEHGKV 111 (383)
T ss_dssp GGGGTTCEEEEESCTTSHHHHHHHHHHTTTCEE
T ss_pred ccCCCCCEEEEecCccCHHHHHHHHHhCCCCEE
Confidence 447789999999999999999999999776676
No 101
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=47.08 E-value=26 Score=27.02 Aligned_cols=29 Identities=21% Similarity=0.155 Sum_probs=24.2
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 205 VAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 205 V~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
..++.+||.++.+.|.++.+++++ |.+++
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v 57 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR--GMSAA 57 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT--TCCEE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc--CCCEE
Confidence 678899999999999999998887 44555
No 102
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=46.87 E-value=33 Score=30.94 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=36.1
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHH---HHHHHhCCCceE-EecC
Q 025480 192 RVDMLSLLLSMGNVAANSDVLVVDMAGGLLTG---AVAERLGGLEDY-YFLG 239 (252)
Q Consensus 192 R~DtLa~iL~~anV~~g~rvLv~d~~~Gll~a---AvleRmgg~G~i-~~~g 239 (252)
-.+.++..|...+|..+..|+|+|+.+|.-++ +++..+ |.-.| +-.|
T Consensus 97 ~~~~f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~-Gh~~V~vLdG 147 (327)
T 3utn_X 97 TKKVFDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVM-GHPKVYLLNN 147 (327)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHT-TCSEEEEESC
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHc-CCCceeeccc
Confidence 46899999999999999999999998876554 445444 55567 5444
No 103
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=46.28 E-value=13 Score=32.42 Aligned_cols=25 Identities=8% Similarity=0.092 Sum_probs=21.7
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 204 NVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 204 nV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
-|.+|.+|+-+++++|.++.+++.+
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~ 42 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKN 42 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHT
T ss_pred hCCCCCEEEEECCccHHHHHHHHHh
Confidence 4678999999999999998888875
No 104
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=46.25 E-value=20 Score=32.19 Aligned_cols=34 Identities=29% Similarity=0.270 Sum_probs=26.6
Q ss_pred HHHhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCC
Q 025480 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGG 231 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg 231 (252)
+.|..+++++|.+|||.+.+. |+++..+|..+|.
T Consensus 176 ~al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga 210 (398)
T 1kol_A 176 HGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGA 210 (398)
T ss_dssp HHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCC
Confidence 344578999999999998533 6788888888864
No 105
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=46.06 E-value=18 Score=33.34 Aligned_cols=44 Identities=11% Similarity=0.004 Sum_probs=33.7
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE-EecC
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY-YFLG 239 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i-~~~g 239 (252)
|.-++.+.+++||+.|+-+--+.|--+.++++++|+.|+| .+.-
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~ 90 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDR 90 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEES
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEEC
Confidence 3455666689999987555446788999999999999999 5443
No 106
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=45.28 E-value=18 Score=29.26 Aligned_cols=33 Identities=21% Similarity=0.055 Sum_probs=27.1
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
|..++...++.+|.+||.++.+.|..+..++++
T Consensus 11 l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~ 43 (203)
T 1pjz_A 11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ 43 (203)
T ss_dssp HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH
T ss_pred HHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHC
Confidence 444455567889999999999999999999886
No 107
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=44.80 E-value=20 Score=31.80 Aligned_cols=31 Identities=19% Similarity=0.150 Sum_probs=25.5
Q ss_pred hhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDMAG-GLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+.+. |++++.+|..+|.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga 215 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGA 215 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTC
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 578999999999998533 6888888888864
No 108
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=44.39 E-value=21 Score=31.69 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=25.4
Q ss_pred HHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 197 a~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
..|+....+.+|.+||.++.+.|.++..++++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~ 85 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKA 85 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHT
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHc
Confidence 34445556788999999999999998888876
No 109
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=44.32 E-value=22 Score=31.60 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=26.7
Q ss_pred HhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 200 LSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 200 L~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
...+++++|.+|||.+.++ |++++.+|..+|.. +|
T Consensus 183 ~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~-~V 218 (373)
T 2fzw_A 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGAS-RI 218 (373)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCS-EE
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eE
Confidence 3578999999999998522 67888888888642 45
No 110
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=44.07 E-value=43 Score=29.81 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=30.0
Q ss_pred HHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.|+.+....++.+||...+++|.++.++++++++...|
T Consensus 30 ~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i 67 (421)
T 2ih2_A 30 FMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRF 67 (421)
T ss_dssp HHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEE
T ss_pred HHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeE
Confidence 34445555667899999999999999999998765666
No 111
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=44.07 E-value=21 Score=31.63 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=26.7
Q ss_pred HhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 200 LSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 200 L~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
|..+++++|.+|||.+.++ |++++.+|..+|. .+|
T Consensus 164 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~V 199 (356)
T 1pl8_A 164 CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGA-AQV 199 (356)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEE
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEE
Confidence 4678999999999998533 6888888887764 345
No 112
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=42.56 E-value=33 Score=29.17 Aligned_cols=30 Identities=20% Similarity=0.161 Sum_probs=24.4
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 206 AANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 206 ~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.++.+||.++++.|.++..+++++.+..++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v 64 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQI 64 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEE
Confidence 588999999999999999999887444444
No 113
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=42.50 E-value=25 Score=27.69 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=27.6
Q ss_pred HHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 195 tLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
....++...+..++ +||.++.+.|.++..++++
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~ 64 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGALSIALAKQ 64 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc
Confidence 35666777788877 9999999999999999988
No 114
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=42.29 E-value=24 Score=31.33 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=26.6
Q ss_pred HhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 200 LSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 200 L~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
...+++++|.+|||.+.+. |++++.+|..+|.. +|
T Consensus 184 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~-~V 219 (373)
T 1p0f_A 184 VNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGAS-RI 219 (373)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCS-EE
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eE
Confidence 3578999999999998522 67888888888642 45
No 115
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=42.10 E-value=21 Score=30.19 Aligned_cols=36 Identities=28% Similarity=0.279 Sum_probs=29.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 193 ~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
.|++ .|..++.+.++.+||.++++.|.++-.++.|.
T Consensus 23 ~D~~-lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~ 58 (260)
T 2ozv_A 23 MDAM-LLASLVADDRACRIADLGAGAGAAGMAVAARL 58 (260)
T ss_dssp CHHH-HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHC
T ss_pred cHHH-HHHHHhcccCCCEEEEeCChHhHHHHHHHHhC
Confidence 4543 44557889999999999999999999999886
No 116
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=42.03 E-value=50 Score=23.59 Aligned_cols=23 Identities=22% Similarity=0.274 Sum_probs=18.7
Q ss_pred CCccCCCEEEEEeCCCCeEEEEEE
Q 025480 15 QLTWEGCSVLLDINDGDRLVFARL 38 (252)
Q Consensus 15 ~~I~eGd~Vll~~~~g~~~~~v~l 38 (252)
....+|+.||++-.|| .+|+-+|
T Consensus 14 ~~~~~geDVL~rw~DG-~fYLGtI 36 (69)
T 2xk0_A 14 VTYALQEDVFIKCNDG-RFYLGTI 36 (69)
T ss_dssp CCCCTTCEEEEECTTS-CEEEEEE
T ss_pred cccccCCeEEEEecCC-CEEEEEE
Confidence 4589999999999987 5767655
No 117
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=41.89 E-value=25 Score=31.23 Aligned_cols=35 Identities=17% Similarity=0.212 Sum_probs=26.3
Q ss_pred HhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 200 LSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 200 L~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
...+++++|.+|||.+.++ |+++..+|..+|.. +|
T Consensus 185 ~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-~V 220 (374)
T 1cdo_A 185 VNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAK-RI 220 (374)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCS-EE
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EE
Confidence 3568999999999998522 67888888887642 45
No 118
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=41.61 E-value=26 Score=31.34 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=27.3
Q ss_pred HHHhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCC
Q 025480 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGL 232 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~ 232 (252)
+.|..+++++|.+|||.+.++ |++++.+|..+|..
T Consensus 185 ~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~ 220 (369)
T 1uuf_A 185 SPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAH 220 (369)
T ss_dssp HHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCCE
Confidence 445567999999999998633 78888888888763
No 119
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=41.48 E-value=32 Score=27.27 Aligned_cols=29 Identities=21% Similarity=0.204 Sum_probs=23.2
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 205 VAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 205 V~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+.++.+||.++.+.|.++.+++++ |.+++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v 86 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL--GAKSV 86 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT--TCSEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC--CCCEE
Confidence 678999999999999998887764 34455
No 120
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=41.45 E-value=26 Score=31.16 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=26.2
Q ss_pred HhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 200 LSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 200 L~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
...+++++|.+|||.+.++ |++++.+|..+|. .+|
T Consensus 184 ~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~V 219 (374)
T 2jhf_A 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGA-ARI 219 (374)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEE
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeE
Confidence 3568999999999998532 6778888887763 245
No 121
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=41.11 E-value=66 Score=28.78 Aligned_cols=45 Identities=22% Similarity=0.211 Sum_probs=37.2
Q ss_pred CCHHHHHHHHhhcCCCCCCeEEEEeC-------CCc--HHHHHHHHHhCCCceE
Q 025480 191 LRVDMLSLLLSMGNVAANSDVLVVDM-------AGG--LLTGAVAERLGGLEDY 235 (252)
Q Consensus 191 lR~DtLa~iL~~anV~~g~rvLv~d~-------~~G--ll~aAvleRmgg~G~i 235 (252)
...+.|..-|.-.+|++|+.+||=-+ ++| .|..|+++.+|.+|+|
T Consensus 22 ~T~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTL 75 (286)
T 3sma_A 22 VTRDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTL 75 (286)
T ss_dssp ECHHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEE
T ss_pred cCHHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEE
Confidence 45677888999999999999998755 334 4577999999999999
No 122
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=40.76 E-value=46 Score=26.27 Aligned_cols=31 Identities=13% Similarity=0.027 Sum_probs=24.8
Q ss_pred cCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 203 GNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 203 anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+..+|.+||.++.+.|.++.+++++ |.+++
T Consensus 45 ~~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v 75 (207)
T 1wy7_A 45 LGDIEGKVVADLGAGTGVLSYGALLL--GAKEV 75 (207)
T ss_dssp TTSSTTCEEEEETCTTCHHHHHHHHT--TCSEE
T ss_pred cCCCCcCEEEEeeCCCCHHHHHHHHc--CCCEE
Confidence 35678999999999999999998886 33445
No 123
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=40.31 E-value=28 Score=30.98 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=26.3
Q ss_pred HhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 200 LSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 200 L~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
...+++++|.+|||.+.+. |++++.+|..+|. .+|
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~V 223 (376)
T 1e3i_A 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGA-SRI 223 (376)
T ss_dssp HTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEE
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeE
Confidence 3578999999999998522 6788888888763 345
No 124
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=39.97 E-value=26 Score=31.33 Aligned_cols=36 Identities=25% Similarity=0.287 Sum_probs=27.4
Q ss_pred HHhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 199 LLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 199 iL~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
.+..+++++|.+|||.+.++ |+++..+|..+|. .+|
T Consensus 174 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~V 210 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGA-TTV 210 (370)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEE
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEE
Confidence 34778999999999998633 6788888887764 344
No 125
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=39.93 E-value=24 Score=31.08 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=27.4
Q ss_pred HHHhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
+.+..+++++|.+|||.+.+. |+++..+|..+|- .+|
T Consensus 157 ~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~V 194 (352)
T 3fpc_A 157 HGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGA-GRI 194 (352)
T ss_dssp HHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTC-SSE
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEE
Confidence 445789999999999998532 6778888877653 345
No 126
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=39.87 E-value=42 Score=27.01 Aligned_cols=32 Identities=13% Similarity=0.027 Sum_probs=26.6
Q ss_pred HHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 197 a~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
..|+.+....++.+||.++.+.|.++..++++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~ 64 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH 64 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHT
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHC
Confidence 34556667778999999999999999999887
No 127
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=39.76 E-value=27 Score=30.79 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=26.9
Q ss_pred HHhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCC
Q 025480 199 LLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGL 232 (252)
Q Consensus 199 iL~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~ 232 (252)
.|..+++++|.+|||.+.++ |++++.+|..+|..
T Consensus 160 al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~ 194 (352)
T 1e3j_A 160 ACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF 194 (352)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE
Confidence 34678999999999998532 67888888888764
No 128
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=39.31 E-value=37 Score=27.68 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=29.5
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 193 ~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
.+.+..++.....+++.+||.++.+.|.++..++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~ 62 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER 62 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC
Confidence 345667777777788999999999999999988886
No 129
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=39.06 E-value=30 Score=28.14 Aligned_cols=38 Identities=13% Similarity=0.062 Sum_probs=31.1
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 192 RVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 192 R~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
+.+.+..++......++.+||.++.+.|.++..++++.
T Consensus 78 ~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~ 115 (254)
T 1xtp_A 78 DIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL 115 (254)
T ss_dssp HHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH
T ss_pred HHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh
Confidence 34445667777778899999999999999999998885
No 130
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=38.95 E-value=34 Score=26.95 Aligned_cols=26 Identities=19% Similarity=0.146 Sum_probs=23.6
Q ss_pred cCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 203 GNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 203 anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
..+.++.+||.++.+.|.++..++++
T Consensus 42 ~~~~~~~~vLdiG~G~G~~~~~l~~~ 67 (218)
T 3ou2_A 42 RAGNIRGDVLELASGTGYWTRHLSGL 67 (218)
T ss_dssp TTTTSCSEEEEESCTTSHHHHHHHHH
T ss_pred hcCCCCCeEEEECCCCCHHHHHHHhc
Confidence 34889999999999999999999988
No 131
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=38.90 E-value=59 Score=25.40 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=26.8
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 192 RVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 192 R~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
+...+..+|... +.++.+||.++.+.|.++..++++
T Consensus 28 ~~~~~~~~l~~~-~~~~~~vLdiGcG~G~~~~~l~~~ 63 (215)
T 2pxx_A 28 DFSSFRALLEPE-LRPEDRILVLGCGNSALSYELFLG 63 (215)
T ss_dssp CHHHHHHHHGGG-CCTTCCEEEETCTTCSHHHHHHHT
T ss_pred CHHHHHHHHHHh-cCCCCeEEEECCCCcHHHHHHHHc
Confidence 344455555432 588999999999999999888876
No 132
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=38.82 E-value=28 Score=30.85 Aligned_cols=31 Identities=26% Similarity=0.401 Sum_probs=25.3
Q ss_pred hhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDMAG-GLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+.+. |++++.+|..+|-
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga 214 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGA 214 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 578999999999999422 6888888888875
No 133
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=38.53 E-value=5.1 Score=30.96 Aligned_cols=32 Identities=9% Similarity=-0.061 Sum_probs=26.8
Q ss_pred HHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
.++...++.++.+||.++.+.|.++.+++++.
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~ 39 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFA 39 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCTTHHHHHTTE
T ss_pred HHHHhcCcCCCCeEEEECCCCCHHHHHHHhhc
Confidence 44555578899999999999999999998875
No 134
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=38.24 E-value=17 Score=31.04 Aligned_cols=25 Identities=24% Similarity=0.169 Sum_probs=19.7
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 204 NVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 204 nV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
-|.+|.+|+.+++++|.++.+++.+
T Consensus 12 ~v~~g~~VlDIGtGsG~l~i~la~~ 36 (225)
T 3kr9_A 12 FVSQGAILLDVGSDHAYLPIELVER 36 (225)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHT
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHh
Confidence 3568888888888888887777764
No 135
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=38.08 E-value=30 Score=30.03 Aligned_cols=34 Identities=26% Similarity=0.218 Sum_probs=27.2
Q ss_pred HHHhhcCCCCCCeEEEEeCC--CcHHHHHHHHHhCC
Q 025480 198 LLLSMGNVAANSDVLVVDMA--GGLLTGAVAERLGG 231 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~--~Gll~aAvleRmgg 231 (252)
+.|..+++++|.+|||.+.+ -|+++..+|..+|-
T Consensus 143 ~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga 178 (321)
T 3tqh_A 143 QALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT 178 (321)
T ss_dssp HHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC
T ss_pred HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC
Confidence 34477999999999999743 37888899988875
No 136
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=38.04 E-value=28 Score=31.20 Aligned_cols=28 Identities=14% Similarity=0.211 Sum_probs=21.9
Q ss_pred hhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 201 SMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
.++++++|.+||.++++.|-+++.++.+
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~ 143 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSH 143 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHH
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHH
Confidence 4689999999999999877666555444
No 137
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=37.91 E-value=20 Score=28.67 Aligned_cols=33 Identities=18% Similarity=0.070 Sum_probs=26.9
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
+..++......++.+||.++.+.|.++..++++
T Consensus 34 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~ 66 (220)
T 3hnr_A 34 YEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLA 66 (220)
T ss_dssp HHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHT
T ss_pred HHHHHHHhhccCCCeEEEeCCCCCHHHHHHHhC
Confidence 345555555668999999999999999999987
No 138
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=37.25 E-value=20 Score=30.06 Aligned_cols=31 Identities=10% Similarity=0.224 Sum_probs=26.7
Q ss_pred HHhhcCCC-CCCeEEEEeCCCcHHHHHHHHHh
Q 025480 199 LLSMGNVA-ANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 199 iL~~anV~-~g~rvLv~d~~~Gll~aAvleRm 229 (252)
+..++.+. ++.+||.++++.|.++..++++.
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~ 71 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT 71 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc
Confidence 44577888 99999999999999999998884
No 139
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=37.12 E-value=28 Score=30.70 Aligned_cols=35 Identities=26% Similarity=0.259 Sum_probs=27.1
Q ss_pred HHHhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCC
Q 025480 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGL 232 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~ 232 (252)
+.|..+++++|.+|||.+.++ |+++..+|..+|-.
T Consensus 170 ~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~ 205 (363)
T 3m6i_A 170 AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGAC 205 (363)
T ss_dssp HHHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 345778999999999998633 67888888877653
No 140
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=36.70 E-value=43 Score=26.14 Aligned_cols=37 Identities=11% Similarity=0.030 Sum_probs=27.9
Q ss_pred HHHhhcCC-CCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 198 LLLSMGNV-AANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL~~anV-~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.++..... .++.+||.++.+.|.++.+++++. ..+++
T Consensus 20 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v 57 (215)
T 4dzr_A 20 EAIRFLKRMPSGTRVIDVGTGSGCIAVSIALAC-PGVSV 57 (215)
T ss_dssp HHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHC-TTEEE
T ss_pred HHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhC-CCCeE
Confidence 34444344 789999999999999999999984 33455
No 141
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=36.31 E-value=42 Score=28.91 Aligned_cols=36 Identities=14% Similarity=0.080 Sum_probs=29.2
Q ss_pred HHHhhcCCCCCCeEEEEeCC-CcHHHHHHHHHhCCCceE
Q 025480 198 LLLSMGNVAANSDVLVVDMA-GGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~-~Gll~aAvleRmgg~G~i 235 (252)
+.|..+++++|.+|||.+.+ -|+++..+|..+|- +|
T Consensus 133 ~al~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga--~V 169 (315)
T 3goh_A 133 QAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY--VV 169 (315)
T ss_dssp HHHTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC--EE
T ss_pred HHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC--EE
Confidence 34478999999999999982 27889999998876 56
No 142
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=36.01 E-value=35 Score=30.12 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=27.8
Q ss_pred HHHhhcCCCCCCeEEEEeCC-CcHHHHHHHHHhCCC
Q 025480 198 LLLSMGNVAANSDVLVVDMA-GGLLTGAVAERLGGL 232 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~-~Gll~aAvleRmgg~ 232 (252)
+.|..+++++|.+|||.+.+ -|++++.+|..+|-.
T Consensus 170 ~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~ 205 (360)
T 1piw_A 170 SPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAE 205 (360)
T ss_dssp HHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTCE
T ss_pred HHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCE
Confidence 44556899999999999972 278888999888763
No 143
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=35.72 E-value=46 Score=26.27 Aligned_cols=30 Identities=17% Similarity=0.170 Sum_probs=24.9
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 204 NVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 204 nV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+..+|.+||.++.+.|.++.+++++ |.+++
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v 77 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESV 77 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEE
Confidence 5678899999999999999999887 44555
No 144
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=35.62 E-value=40 Score=30.09 Aligned_cols=32 Identities=28% Similarity=0.341 Sum_probs=25.6
Q ss_pred HHHhhcC-CCCCCeEEEEeCCC--cHHHHHHHHHhC
Q 025480 198 LLLSMGN-VAANSDVLVVDMAG--GLLTGAVAERLG 230 (252)
Q Consensus 198 ~iL~~an-V~~g~rvLv~d~~~--Gll~aAvleRmg 230 (252)
+.|..++ +++|.+|||.+ ++ |++++.+|..+|
T Consensus 185 ~al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~G 219 (380)
T 1vj0_A 185 HAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLG 219 (380)
T ss_dssp HHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTT
T ss_pred HHHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcC
Confidence 3446778 99999999999 55 678888888876
No 145
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=35.54 E-value=67 Score=25.06 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=22.0
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 206 AANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 206 ~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+|.+||.+..+.|.++.+++.+ |.++|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v 70 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASV 70 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeE
Confidence 57899999999999998877775 33445
No 146
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=35.21 E-value=24 Score=28.34 Aligned_cols=41 Identities=17% Similarity=-0.025 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 190 ~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.+..+.+..+ +..+|.+||.++.+.|.++..++++. +.+++
T Consensus 14 ~~~~~~~~~l----~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v 54 (218)
T 3mq2_A 14 EFSDAEFEQL----RSQYDDVVLDVGTGDGKHPYKVARQN-PSRLV 54 (218)
T ss_dssp ECCHHHHHHH----HTTSSEEEEEESCTTCHHHHHHHHHC-TTEEE
T ss_pred ccCHHHHHHh----hccCCCEEEEecCCCCHHHHHHHHHC-CCCEE
Confidence 3444444444 47889999999999999999999873 34555
No 147
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=34.96 E-value=38 Score=29.63 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=26.9
Q ss_pred HHHhh--cCCCCCCeEEEEeCCC-cHHHHHHHHHhCCC
Q 025480 198 LLLSM--GNVAANSDVLVVDMAG-GLLTGAVAERLGGL 232 (252)
Q Consensus 198 ~iL~~--anV~~g~rvLv~d~~~-Gll~aAvleRmgg~ 232 (252)
+.|.. +++++|.+|||.+.+. |+++..+|..+||.
T Consensus 160 ~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~ 197 (345)
T 3jv7_A 160 HAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAA 197 (345)
T ss_dssp HHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCC
T ss_pred HHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 34444 4899999999998633 78888899888764
No 148
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=34.92 E-value=40 Score=26.12 Aligned_cols=31 Identities=16% Similarity=0.076 Sum_probs=25.8
Q ss_pred HHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
.++.+.+..++.+||.++.+.|.++..++++
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~ 53 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN 53 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC
Confidence 4555667778899999999999999988887
No 149
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=34.36 E-value=48 Score=29.81 Aligned_cols=36 Identities=19% Similarity=0.176 Sum_probs=28.2
Q ss_pred HHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.|+....+.+|.+||.++.+.|.++..++++ |..+|
T Consensus 54 ~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V 89 (376)
T 3r0q_C 54 AVFQNKHHFEGKTVLDVGTGSGILAIWSAQA--GARKV 89 (376)
T ss_dssp HHHTTTTTTTTCEEEEESCTTTHHHHHHHHT--TCSEE
T ss_pred HHHhccccCCCCEEEEeccCcCHHHHHHHhc--CCCEE
Confidence 3445567789999999999999999999887 33344
No 150
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=33.66 E-value=28 Score=30.64 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=24.4
Q ss_pred hhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~--Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+.++ |++++.++..+|+
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~ 168 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPN 168 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTT
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC
Confidence 568999999999998754 6777777777764
No 151
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=33.58 E-value=48 Score=29.25 Aligned_cols=38 Identities=18% Similarity=0.066 Sum_probs=27.1
Q ss_pred HHHHH--hhcCCCCCCeEEEEeCCC------cHHHHHHHHHhCCCceE
Q 025480 196 LSLLL--SMGNVAANSDVLVVDMAG------GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 196 La~iL--~~anV~~g~rvLv~d~~~------Gll~aAvleRmgg~G~i 235 (252)
+.+.| ....+++|.+||.+++++ |- ..++++++..|+|
T Consensus 50 l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V 95 (290)
T 2xyq_A 50 LCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLL 95 (290)
T ss_dssp HHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEE
T ss_pred HHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEE
Confidence 44445 356889999999999955 54 4456777767887
No 152
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=33.23 E-value=63 Score=25.94 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=27.0
Q ss_pred HHHHHhhcC-CCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 196 LSLLLSMGN-VAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 196 La~iL~~an-V~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
+..++.+.. ..++.+||.++.+.|.++..++++.
T Consensus 32 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~ 66 (234)
T 3dtn_A 32 YGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKY 66 (234)
T ss_dssp HHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHC
T ss_pred HHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhC
Confidence 345555444 6788999999999999999999886
No 153
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=32.20 E-value=52 Score=27.34 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=30.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHH
Q 025480 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAE 227 (252)
Q Consensus 193 ~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvle 227 (252)
......++.+....++.+||.++++.|.++..+++
T Consensus 20 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~ 54 (261)
T 3ege_A 20 IRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN 54 (261)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh
Confidence 45567777888889999999999999999999987
No 154
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=32.16 E-value=34 Score=29.23 Aligned_cols=35 Identities=17% Similarity=0.149 Sum_probs=24.7
Q ss_pred HHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 199 LLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 199 iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
++.+.+..+|.+||.++++.|.++.+++.+ | .++|
T Consensus 71 l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v 105 (281)
T 3bzb_A 71 LCWQPELIAGKTVCELGAGAGLVSIVAFLA-G-ADQV 105 (281)
T ss_dssp HHHCGGGTTTCEEEETTCTTSHHHHHHHHT-T-CSEE
T ss_pred HHhcchhcCCCeEEEecccccHHHHHHHHc-C-CCEE
Confidence 334445567889999999999888877664 3 3455
No 155
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=32.08 E-value=41 Score=29.54 Aligned_cols=33 Identities=30% Similarity=0.462 Sum_probs=27.3
Q ss_pred hhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceE
Q 025480 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~--Gll~aAvleRmgg~G~i 235 (252)
..+++++|.+|||.+.++ |++++.++..+|- +|
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga--~V 187 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA--KV 187 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EE
Confidence 678999999999998744 7888888888875 55
No 156
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=31.94 E-value=48 Score=27.11 Aligned_cols=32 Identities=22% Similarity=-0.022 Sum_probs=27.2
Q ss_pred HHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 197 a~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
..++.+....++.+||.++.+.|.++..++++
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~ 65 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEH 65 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHT
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHc
Confidence 45666667778999999999999999999887
No 157
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=31.01 E-value=44 Score=29.45 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=25.5
Q ss_pred hhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~--Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+.++ |+++..+|..+|.
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga 193 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL 193 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC
Confidence 358999999999998644 7888888888864
No 158
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=30.82 E-value=35 Score=30.35 Aligned_cols=36 Identities=19% Similarity=0.316 Sum_probs=27.8
Q ss_pred HHhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 199 LLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 199 iL~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
+...+++++|.+|||.+.+. |+++..+|..+|- .+|
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga-~~V 221 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGA-SRI 221 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTC-SCE
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeE
Confidence 34678999999999998622 7888888888864 345
No 159
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=30.75 E-value=44 Score=28.96 Aligned_cols=31 Identities=29% Similarity=0.303 Sum_probs=25.5
Q ss_pred hhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~--Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+.++ |+.++.++..+|-
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga 166 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGA 166 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC
Confidence 468999999999998544 7888888888875
No 160
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=30.43 E-value=57 Score=28.59 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=26.0
Q ss_pred hhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~--Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+.++ |++++.++..+|-
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga 176 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA 176 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC
Confidence 678999999999999544 7888888888875
No 161
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=30.35 E-value=48 Score=29.38 Aligned_cols=32 Identities=22% Similarity=0.152 Sum_probs=25.7
Q ss_pred HHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 197 a~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
..|+......+|.+||.++.+.|.++..++++
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~ 71 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQA 71 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhC
Confidence 34555556678999999999999998888875
No 162
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=29.44 E-value=63 Score=27.15 Aligned_cols=32 Identities=16% Similarity=0.072 Sum_probs=24.0
Q ss_pred HHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhC
Q 025480 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmg 230 (252)
.++.... .++.+||.+++++|.++.+++.+++
T Consensus 101 ~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~ 132 (276)
T 2b3t_A 101 QALARLP-EQPCRILDLGTGTGAIALALASERP 132 (276)
T ss_dssp HHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCT
T ss_pred HHHHhcc-cCCCEEEEecCCccHHHHHHHHhCC
Confidence 3444434 6788999999999999988887764
No 163
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=29.00 E-value=41 Score=27.39 Aligned_cols=27 Identities=11% Similarity=0.138 Sum_probs=23.6
Q ss_pred hcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 202 MGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 202 ~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
...+.++.+||.++.+.|.++..++++
T Consensus 34 ~~~~~~~~~vLDiG~G~G~~~~~l~~~ 60 (263)
T 2yqz_A 34 VHPKGEEPVFLELGVGTGRIALPLIAR 60 (263)
T ss_dssp CCCSSSCCEEEEETCTTSTTHHHHHTT
T ss_pred hcCCCCCCEEEEeCCcCCHHHHHHHHC
Confidence 457889999999999999999888876
No 164
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=28.90 E-value=27 Score=27.31 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=20.7
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 206 AANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 206 ~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
.++.+||.++.+.|.++.+++++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~ 45 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN 45 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS
T ss_pred CCCCeEEEeccCccHHHHHHHhcC
Confidence 567899999999999999988763
No 165
>1b12_A Signal peptidase I; serine proteinase, serine-dependant hydrolase, signal peptid processing, protein translocation; HET: 1PN; 1.95A {Escherichia coli} SCOP: b.87.1.2 PDB: 3s04_A* 1t7d_A* 3iiq_A* 1kn9_A*
Probab=28.81 E-value=66 Score=27.33 Aligned_cols=63 Identities=16% Similarity=0.133 Sum_probs=38.1
Q ss_pred CCCCcCCCCCccCCCEEEEEeCC-C-----CeEEE---EEEecCCEEEEce----eeeecCcccCCCCCcEEEEeCC
Q 025480 7 QLDPIRNAQLTWEGCSVLLDIND-G-----DRLVF---ARLTSGSTLKIGN----KNCSLQPLIGCPFGSLFQVDNG 70 (252)
Q Consensus 7 ~~~~~~~~~~I~eGd~Vll~~~~-g-----~~~~~---v~l~~~~~i~lgK----~~f~~~~lIG~pyG~t~ei~~~ 70 (252)
.....++..++..||.|++..-. | -..++ -.+++|..|-+.- +..-++-+||.| |.+.++.++
T Consensus 10 ~v~g~SM~Ptl~~GD~vlv~k~~yg~r~P~~~~~l~~~~~~~rGDIvvf~~p~~~~~~~iKRViglp-GD~v~i~~~ 85 (248)
T 1b12_A 10 QIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLP-GDKVTYDPV 85 (248)
T ss_dssp ECCSCTTTTTSCTTEEEEEEESEEEEECGGGSCEEEEECCCCTTCEEEEECTTCTTSEEEEEEEECT-TCEEEEETT
T ss_pred EeccccccccccCCCEEEEEecccCcccccccccccccCCCCCCcEEEEEeCCCCCceEEEEEEeeC-CCEEEEEcC
Confidence 45677888899999999986421 0 00001 1234555444432 244566678887 888888876
No 166
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=28.59 E-value=49 Score=28.70 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=24.9
Q ss_pred hhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~--Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+.++ |+.++.++..+|.
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga 174 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA 174 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC
Confidence 457999999999998544 6888888888775
No 167
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=28.52 E-value=51 Score=27.28 Aligned_cols=25 Identities=28% Similarity=0.319 Sum_probs=22.4
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhC
Q 025480 206 AANSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 206 ~~g~rvLv~d~~~Gll~aAvleRmg 230 (252)
.++.+||.++.+.|.++..++++++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~ 108 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP 108 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC
Confidence 5789999999999999999999874
No 168
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=28.36 E-value=52 Score=28.52 Aligned_cols=37 Identities=22% Similarity=0.314 Sum_probs=27.7
Q ss_pred HHHHhhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCc
Q 025480 197 SLLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGLE 233 (252)
Q Consensus 197 a~iL~~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G 233 (252)
.+.+..+++++|.+|||...++ |++++.+|..+|..-
T Consensus 150 ~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~ 187 (346)
T 4a2c_A 150 LHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKS 187 (346)
T ss_dssp HHHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcE
Confidence 4556788999999999997632 567777777777653
No 169
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=28.30 E-value=44 Score=28.36 Aligned_cols=26 Identities=12% Similarity=-0.058 Sum_probs=21.5
Q ss_pred cCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 203 GNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 203 anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
.+..+|+|||+++.+.|..+..++++
T Consensus 64 ~~~~~~~~vLD~GCG~G~~~~~La~~ 89 (252)
T 2gb4_A 64 LKGQSGLRVFFPLCGKAIEMKWFADR 89 (252)
T ss_dssp HTTCCSCEEEETTCTTCTHHHHHHHT
T ss_pred ccCCCCCeEEEeCCCCcHHHHHHHHC
Confidence 35678899999999999888888775
No 170
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=28.29 E-value=51 Score=27.58 Aligned_cols=29 Identities=28% Similarity=0.311 Sum_probs=24.2
Q ss_pred HHhhcCCCCCCeEEEEeCCCcHHHHHHHH
Q 025480 199 LLSMGNVAANSDVLVVDMAGGLLTGAVAE 227 (252)
Q Consensus 199 iL~~anV~~g~rvLv~d~~~Gll~aAvle 227 (252)
++.+....++.+||.++.+.|.++..+++
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~ 77 (279)
T 3ccf_A 49 LLQLLNPQPGEFILDLGCGTGQLTEKIAQ 77 (279)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHH
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHh
Confidence 44455678899999999999999999888
No 171
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=28.22 E-value=43 Score=27.25 Aligned_cols=27 Identities=15% Similarity=0.123 Sum_probs=23.3
Q ss_pred hcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 202 MGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 202 ~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
+..+.+|.+||.++.+.|.++..++++
T Consensus 36 l~~~~~~~~vLDiGcG~G~~~~~l~~~ 62 (240)
T 3dli_A 36 IPYFKGCRRVLDIGCGRGEFLELCKEE 62 (240)
T ss_dssp GGGTTTCSCEEEETCTTTHHHHHHHHH
T ss_pred HhhhcCCCeEEEEeCCCCHHHHHHHhC
Confidence 344678999999999999999998887
No 172
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=28.19 E-value=42 Score=29.33 Aligned_cols=31 Identities=23% Similarity=0.177 Sum_probs=26.3
Q ss_pred hhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~--Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+.++ |++++.++..+|.
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga 170 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF 170 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC
Confidence 578999999999998764 7888888888875
No 173
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=28.16 E-value=64 Score=27.31 Aligned_cols=34 Identities=9% Similarity=0.158 Sum_probs=24.4
Q ss_pred HHHHHhhcC-CCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 196 LSLLLSMGN-VAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 196 La~iL~~an-V~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
+..++...+ ..++.|||.++.+.|.++..++.++
T Consensus 40 l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l 74 (292)
T 2aot_A 40 LPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKV 74 (292)
T ss_dssp HHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHH
T ss_pred chhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHH
Confidence 445555444 5788999999999998776655554
No 174
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=28.01 E-value=92 Score=24.82 Aligned_cols=60 Identities=20% Similarity=0.289 Sum_probs=39.4
Q ss_pred CCCcCCCCCccCCCEEEEEe-CCCCeEEEEEEecCCEEEEcee--eeecC-----cccCCCCCcEEEEeC
Q 025480 8 LDPIRNAQLTWEGCSVLLDI-NDGDRLVFARLTSGSTLKIGNK--NCSLQ-----PLIGCPFGSLFQVDN 69 (252)
Q Consensus 8 ~~~~~~~~~I~eGd~Vll~~-~~g~~~~~v~l~~~~~i~lgK~--~f~~~-----~lIG~pyG~t~ei~~ 69 (252)
+|+.. ...|..|.+|.|.. .+|+...+.-|-|+ ...+.++ .++.. .|+|+.=|.++++..
T Consensus 75 i~~~~-~~~V~~Gs~V~l~~~~~~~~~~~~iVg~~-ead~~~~~~~IS~~SPlG~ALlGk~~GD~v~~~~ 142 (156)
T 2f23_A 75 LEEGS-GEVIGLGSVVELEDPLSGERLSVQVVSPA-EANVLDTPMKISDASPMGKALLGHRVGDVLSLDT 142 (156)
T ss_dssp CCTTC-SCCCCTTCEEEEECTTTCCEEEEEEECGG-GCBTTSSSEEEETTSHHHHHHTTCCTTCEEEEEE
T ss_pred cCCCC-CCEEEeCcEEEEEEcCCCCEEEEEEEChh-HcCcCCCCEEECCCCHHHHHHcCCCCCCEEEEEc
Confidence 45544 67899999999987 44544433333332 2333445 56654 699999999999874
No 175
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=27.97 E-value=66 Score=28.04 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=27.7
Q ss_pred HHHhhcCCCCCCeEEEEeCC-CcHHHHHHHHHhCCCceE
Q 025480 198 LLLSMGNVAANSDVLVVDMA-GGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~-~Gll~aAvleRmgg~G~i 235 (252)
+.|..+++++|.+|||.+.+ -|+.++.++..+|- +|
T Consensus 155 ~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga--~V 191 (339)
T 1rjw_A 155 KALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL--NV 191 (339)
T ss_dssp HHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC--EE
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC--EE
Confidence 34455699999999999873 37888888888864 55
No 176
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=27.83 E-value=52 Score=27.08 Aligned_cols=23 Identities=4% Similarity=0.008 Sum_probs=20.0
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHh
Q 025480 207 ANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 207 ~g~rvLv~d~~~Gll~aAvleRm 229 (252)
++.+||.+.++.|.++.+++.+.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~ 87 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL 87 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHhC
Confidence 57899999999999888888876
No 177
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=27.71 E-value=30 Score=28.67 Aligned_cols=42 Identities=10% Similarity=-0.016 Sum_probs=30.2
Q ss_pred HHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHh-CCCceE
Q 025480 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERL-GGLEDY 235 (252)
Q Consensus 194 DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRm-gg~G~i 235 (252)
+.+..++......++.+||.+..++|.++.++++++ .+..+|
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v 80 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQV 80 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEE
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeE
Confidence 445556655544577899999999999999999985 233445
No 178
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=27.69 E-value=16 Score=31.48 Aligned_cols=57 Identities=12% Similarity=-0.055 Sum_probs=35.3
Q ss_pred HHHhhcCcch-hcCCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 178 EAYFKKNPAR-IGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 178 e~y~~k~P~K-i~~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
..+|.+.|.- ...-|.+.+..+| ...+.+|.+||.++++.|..+.+++.+..+.+++
T Consensus 89 ~~~~~~~~~~l~~~~~~~~~~~~l-~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v 146 (305)
T 3ocj_A 89 RVFYERLPAVLATRERHGHFRRAL-QRHLRPGCVVASVPCGWMSELLALDYSACPGVQL 146 (305)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHH-HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEE
T ss_pred HHHHhhchhhhcchHHHHHHHHHH-HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeE
Confidence 3445555532 1222233355555 6678899999999999998888876444444444
No 179
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=27.27 E-value=53 Score=29.48 Aligned_cols=44 Identities=14% Similarity=0.134 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 190 ~lR~DtLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
.|+....+.|+.++ ..+|.++|.+..++|.++..++.+ |..|+|
T Consensus 201 ~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~-~~~~~v 244 (373)
T 3tm4_A 201 HLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALR-RYSGEI 244 (373)
T ss_dssp CCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHT-TCCSCE
T ss_pred CccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHh-CCCCeE
Confidence 46777777888888 999999999999999988888764 555555
No 180
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=27.24 E-value=63 Score=28.36 Aligned_cols=33 Identities=12% Similarity=0.063 Sum_probs=28.1
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
|..|+...-+++|.+||-++.+.|.++..++++
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~ 103 (305)
T 2p41_A 71 LRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL 103 (305)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS
T ss_pred HHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc
Confidence 556666656789999999999999999999998
No 181
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=26.97 E-value=32 Score=27.57 Aligned_cols=30 Identities=10% Similarity=0.055 Sum_probs=23.0
Q ss_pred HhhcCCCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 200 LSMGNVAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 200 L~~anV~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
+.+....++.+||.++.+.|.++.+++++.
T Consensus 22 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~ 51 (217)
T 3jwh_A 22 VAALKQSNARRVIDLGCGQGNLLKILLKDS 51 (217)
T ss_dssp HHHHHHTTCCEEEEETCTTCHHHHHHHHCT
T ss_pred HHHHHhcCCCEEEEeCCCCCHHHHHHHhhC
Confidence 333345678899999999999998888753
No 182
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=26.83 E-value=61 Score=28.09 Aligned_cols=36 Identities=25% Similarity=0.428 Sum_probs=27.9
Q ss_pred HHH-hhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceE
Q 025480 198 LLL-SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL-~~anV~~g~rvLv~d~~~--Gll~aAvleRmgg~G~i 235 (252)
+.| ..+++++|.+|||.+.++ |+.++.++..+|- +|
T Consensus 139 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga--~V 177 (336)
T 4b7c_A 139 FALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC--RV 177 (336)
T ss_dssp HHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EE
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC--EE
Confidence 344 678999999999998855 6777777877765 55
No 183
>2ftc_B Mitochondrial ribosomal protein L2; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_B
Probab=26.80 E-value=38 Score=27.13 Aligned_cols=16 Identities=0% Similarity=0.136 Sum_probs=13.6
Q ss_pred cCCCEEEEEeCCCCeE
Q 025480 18 WEGCSVLLDINDGDRL 33 (252)
Q Consensus 18 ~eGd~Vll~~~~g~~~ 33 (252)
++|+++.|++|+|+.+
T Consensus 94 ke~~~~~vrLPSGe~r 109 (136)
T 2ftc_B 94 KVNGTAIIQLPSKRQM 109 (136)
T ss_pred ecCCEEEEECCCCCeE
Confidence 6789999999998765
No 184
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=26.80 E-value=50 Score=28.27 Aligned_cols=27 Identities=30% Similarity=0.239 Sum_probs=24.1
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCC
Q 025480 206 AANSDVLVVDMAGGLLTGAVAERLGGL 232 (252)
Q Consensus 206 ~~g~rvLv~d~~~Gll~aAvleRmgg~ 232 (252)
.+|.+||.++.+.|.++..+++++++.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~ 71 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPS 71 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCS
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCC
Confidence 478999999999999999999998653
No 185
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=26.42 E-value=76 Score=25.47 Aligned_cols=36 Identities=17% Similarity=0.164 Sum_probs=28.4
Q ss_pred HHHHh-hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 197 SLLLS-MGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 197 a~iL~-~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
-+|+. +.-+++|.+||.++.+.|.++-.++++ .|+|
T Consensus 14 ~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~---~~~V 50 (191)
T 3dou_A 14 EFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL---ARKI 50 (191)
T ss_dssp HHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT---CSEE
T ss_pred HHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc---CCcE
Confidence 34444 344689999999999999999999998 5666
No 186
>3j20_E 30S ribosomal protein S4E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.38 E-value=70 Score=28.03 Aligned_cols=32 Identities=13% Similarity=0.229 Sum_probs=25.9
Q ss_pred CCCccCCCEEEEEeCCCCeEEEEEEecCCEEE
Q 025480 14 AQLTWEGCSVLLDINDGDRLVFARLTSGSTLK 45 (252)
Q Consensus 14 ~~~I~eGd~Vll~~~~g~~~~~v~l~~~~~i~ 45 (252)
...|+.||+|++.+++++..-++++..|..+-
T Consensus 155 d~~ik~~Dtv~idl~~~kI~d~ikf~~G~l~m 186 (243)
T 3j20_E 155 KDNYFTSYTVLMKVPEREILEVLPFEKGAYVF 186 (243)
T ss_dssp CSSCSSCEEEEEETTTTEEEEEEECCTTCEEE
T ss_pred CCCcccCCEEEEECCCCCeeeEEeccCCCEEE
Confidence 45699999999999998877788888776444
No 187
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=26.16 E-value=11 Score=28.94 Aligned_cols=40 Identities=23% Similarity=0.238 Sum_probs=30.7
Q ss_pred HHHhhcCCCCCCeEEEEeCCCc--HHHHHHHHHhCCCceEEecC
Q 025480 198 LLLSMGNVAANSDVLVVDMAGG--LLTGAVAERLGGLEDYYFLG 239 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~G--ll~aAvleRmgg~G~i~~~g 239 (252)
-+|-.||+.|+-+|-|++-.+| +-|.++.-. |+|.|.-.|
T Consensus 7 dLl~aA~i~~~E~V~I~NvnNG~Rf~TYvI~Ge--GSG~I~lNG 48 (102)
T 3plx_B 7 KLLQASGILEYEKVQVVNVNNGARFETYTIATQ--EEGVVCLNG 48 (102)
T ss_dssp HHHHHHTCCTTCEEEEEETTTCCEEEEECEEES--STTCEEEEG
T ss_pred HHHHHcCCCCCCEEEEEECCCCcEEEEEEEEcC--CCCEEEeCc
Confidence 4788999999999999999888 455555333 788885555
No 188
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=26.08 E-value=56 Score=29.27 Aligned_cols=33 Identities=9% Similarity=0.181 Sum_probs=29.3
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
...++...++.++.+||.++.+.|.++..++++
T Consensus 96 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~ 128 (416)
T 4e2x_A 96 ARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA 128 (416)
T ss_dssp HHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT
T ss_pred HHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc
Confidence 567778888999999999999999999999886
No 189
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=25.89 E-value=78 Score=21.84 Aligned_cols=23 Identities=35% Similarity=0.592 Sum_probs=18.4
Q ss_pred CccCCCEEEEEeCCCCeEEEEEEe
Q 025480 16 LTWEGCSVLLDINDGDRLVFARLT 39 (252)
Q Consensus 16 ~I~eGd~Vll~~~~g~~~~~v~l~ 39 (252)
.+++|+-||.+-.+| ++|+-++.
T Consensus 3 ~f~~GedVLarwsDG-~fYlGtI~ 25 (58)
T 4hcz_A 3 RLWEGQDVLARWTDG-LLYLGTIK 25 (58)
T ss_dssp SCCTTCEEEEECTTS-CEEEEEEE
T ss_pred ccccCCEEEEEecCC-CEEeEEEE
Confidence 478999999999987 57676654
No 190
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.73 E-value=96 Score=21.71 Aligned_cols=27 Identities=22% Similarity=0.231 Sum_probs=21.4
Q ss_pred CCCCccCCCEEEEEeCCCCeEEEEEEec
Q 025480 13 NAQLTWEGCSVLLDINDGDRLVFARLTS 40 (252)
Q Consensus 13 ~~~~I~eGd~Vll~~~~g~~~~~v~l~~ 40 (252)
.+..+.||+.||.+-.+| .+|+-++++
T Consensus 4 g~~~f~eGqdVLarWsDG-lfYlgtV~k 30 (63)
T 2e5q_A 4 GSSGLTEGQYVLCRWTDG-LYYLGKIKR 30 (63)
T ss_dssp SCCCCCTTCEEEEECTTS-CEEEEEECC
T ss_pred CccceecCCEEEEEecCC-CEEEEEEEE
Confidence 456689999999999987 577777753
No 191
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.41 E-value=1.1e+02 Score=23.39 Aligned_cols=24 Identities=17% Similarity=0.303 Sum_probs=18.7
Q ss_pred ccCCHHHHHHHHHcCCChHHHHHH
Q 025480 112 QCLSGEDIDEMRRQGATGEEIVEA 135 (252)
Q Consensus 112 QkLs~eeI~eLK~~g~~g~eII~~ 135 (252)
-.++.++|..||+.|.=.+++.++
T Consensus 77 ~r~~~~qvk~L~k~g~wP~~F~~~ 100 (111)
T 2dgy_A 77 FVLCKDHVRSLQKEGFWPEAFSEV 100 (111)
T ss_dssp EECCHHHHHHHHHHTCSCHHHHHH
T ss_pred EEeCHHHHHHHHHcCCCChHHhhc
Confidence 467899999999999766666554
No 192
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=25.12 E-value=84 Score=25.06 Aligned_cols=24 Identities=17% Similarity=0.169 Sum_probs=21.7
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 206 AANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 206 ~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
.++.+||.++.+.|.++..++++.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~ 62 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF 62 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH
T ss_pred CCCCeEEEecccCCHHHHHHHHhC
Confidence 788999999999999999998874
No 193
>1rl2_A Protein (ribosomal protein L2); RNA-binding domain, peptidyltransferease center, X-RAY diffraction; 2.30A {Geobacillus stearothermophilus} SCOP: b.34.5.3 b.40.4.5 PDB: 1c04_A 487d_I
Probab=25.06 E-value=37 Score=27.20 Aligned_cols=27 Identities=19% Similarity=0.356 Sum_probs=18.1
Q ss_pred cCCCEEEEEeCCCCeEEEEEEecCCEEEEc
Q 025480 18 WEGCSVLLDINDGDRLVFARLTSGSTLKIG 47 (252)
Q Consensus 18 ~eGd~Vll~~~~g~~~~~v~l~~~~~i~lg 47 (252)
+||+++.|++|+|+.++ +...-...+|
T Consensus 107 ke~~~~~vrLPSGe~r~---v~~~c~AtIG 133 (137)
T 1rl2_A 107 KEGKYVIVRLASGEVRM---ILGKCRATVG 133 (137)
T ss_dssp EETTEEEEECTTSCEEE---EETTSEEEES
T ss_pred EcCCEEEEECCCCCeEE---ECCcCcEEEE
Confidence 67999999999987553 3344444444
No 194
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=25.05 E-value=64 Score=28.39 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=25.5
Q ss_pred hhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~--Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+.++ |+.++.++..+|-
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga 193 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA 193 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 568999999999996544 7888888888875
No 195
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=24.98 E-value=65 Score=24.54 Aligned_cols=24 Identities=13% Similarity=0.292 Sum_probs=21.5
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 205 VAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 205 V~~g~rvLv~d~~~Gll~aAvleR 228 (252)
+.++.+||.++.+.|.++.+++++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~ 67 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ 67 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC
Confidence 678999999999999999988887
No 196
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=24.45 E-value=63 Score=28.34 Aligned_cols=29 Identities=7% Similarity=0.000 Sum_probs=24.4
Q ss_pred cCCCCC-CeEEEEeCCC--cHHHHHHHHHhCC
Q 025480 203 GNVAAN-SDVLVVDMAG--GLLTGAVAERLGG 231 (252)
Q Consensus 203 anV~~g-~rvLv~d~~~--Gll~aAvleRmgg 231 (252)
+++++| .+|||.+.++ |+++..+|..+|.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga 193 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF 193 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCC
Confidence 699999 9999998644 6888889988875
No 197
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=23.99 E-value=79 Score=28.81 Aligned_cols=38 Identities=8% Similarity=0.076 Sum_probs=31.5
Q ss_pred HHHHHHHHhhcCCCC------CCeEEEEeCCCcHHHHHHHHHhC
Q 025480 193 VDMLSLLLSMGNVAA------NSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 193 ~DtLa~iL~~anV~~------g~rvLv~d~~~Gll~aAvleRmg 230 (252)
...+..|+..+++.+ +..||+++-+-|.+|.+++++..
T Consensus 38 ~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~ 81 (353)
T 1i4w_A 38 PTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC 81 (353)
T ss_dssp HHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCC
Confidence 345677888888875 58999999999999999999854
No 198
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=23.96 E-value=45 Score=26.41 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=25.7
Q ss_pred HHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 195 tLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
.+..++. .+.++.+||.++.+.|.++..++++
T Consensus 33 ~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~ 64 (211)
T 3e23_A 33 TLTKFLG--ELPAGAKILELGCGAGYQAEAMLAA 64 (211)
T ss_dssp HHHHHHT--TSCTTCEEEESSCTTSHHHHHHHHT
T ss_pred HHHHHHH--hcCCCCcEEEECCCCCHHHHHHHHc
Confidence 3444443 4678999999999999999999987
No 199
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=23.75 E-value=34 Score=30.42 Aligned_cols=32 Identities=22% Similarity=0.188 Sum_probs=24.4
Q ss_pred hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 202 MGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 202 ~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
...+.+|.+||.++.+.|.++.+++++ |.++|
T Consensus 61 ~~~~~~~~~VLDvGcG~G~~~~~la~~--g~~~v 92 (349)
T 3q7e_A 61 NRHLFKDKVVLDVGSGTGILCMFAAKA--GARKV 92 (349)
T ss_dssp CHHHHTTCEEEEESCTTSHHHHHHHHT--TCSEE
T ss_pred ccccCCCCEEEEEeccchHHHHHHHHC--CCCEE
Confidence 345568899999999999998888887 44444
No 200
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=23.62 E-value=73 Score=25.79 Aligned_cols=27 Identities=7% Similarity=0.018 Sum_probs=23.5
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhC
Q 025480 204 NVAANSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 204 nV~~g~rvLv~d~~~Gll~aAvleRmg 230 (252)
.+.++.+||.++.+.|.++..++++..
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~ 79 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP 79 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC
Confidence 378999999999999999999988743
No 201
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=23.57 E-value=72 Score=27.81 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=26.9
Q ss_pred HHHh-hcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceE
Q 025480 198 LLLS-MGNVAANSDVLVVDMAG-GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL~-~anV~~g~rvLv~d~~~-Gll~aAvleRmgg~G~i 235 (252)
+.|. .+++ +|.+|||.+.++ |++++.+|..+|- ++|
T Consensus 155 ~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga-~~V 192 (343)
T 2dq4_A 155 HTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGA-GPI 192 (343)
T ss_dssp HHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTC-CSE
T ss_pred HHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCC-CEE
Confidence 3445 7899 999999999822 6788888888764 345
No 202
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=23.41 E-value=41 Score=29.55 Aligned_cols=27 Identities=22% Similarity=0.204 Sum_probs=20.9
Q ss_pred hcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 202 MGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 202 ~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
...+.++.+||.++.+.|.++..++++
T Consensus 33 ~~~~~~~~~VLDiGcGtG~ls~~la~~ 59 (328)
T 1g6q_1 33 NKDLFKDKIVLDVGCGTGILSMFAAKH 59 (328)
T ss_dssp HHHHHTTCEEEEETCTTSHHHHHHHHT
T ss_pred hHhhcCCCEEEEecCccHHHHHHHHHC
Confidence 344567888999988888888877775
No 203
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=23.29 E-value=32 Score=27.51 Aligned_cols=33 Identities=9% Similarity=0.101 Sum_probs=23.7
Q ss_pred HHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 197 a~iL~~anV~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
..++.+....++.+||.++.+.|.++.+++++.
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~ 51 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDK 51 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHTST
T ss_pred HHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcC
Confidence 333333344678899999999999888887753
No 204
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=23.01 E-value=70 Score=28.35 Aligned_cols=34 Identities=26% Similarity=0.321 Sum_probs=26.6
Q ss_pred hhcCCC-----CCCeEEEEeCCC--cHHHHHHHHHhCCCceE
Q 025480 201 SMGNVA-----ANSDVLVVDMAG--GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 201 ~~anV~-----~g~rvLv~d~~~--Gll~aAvleRmgg~G~i 235 (252)
..++++ +|.+|||.+.++ |++++.+|..++|- +|
T Consensus 160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~V 200 (363)
T 4dvj_A 160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TV 200 (363)
T ss_dssp TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EE
T ss_pred HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EE
Confidence 568888 899999998544 78888888887664 45
No 205
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=22.96 E-value=51 Score=30.25 Aligned_cols=29 Identities=21% Similarity=0.296 Sum_probs=24.3
Q ss_pred cCCCCCCeEEEEeCCC--cHHHHHHHHHhCC
Q 025480 203 GNVAANSDVLVVDMAG--GLLTGAVAERLGG 231 (252)
Q Consensus 203 anV~~g~rvLv~d~~~--Gll~aAvleRmgg 231 (252)
+++++|.+|||.+.++ |+++..+|..+|.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga 254 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGA 254 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence 7999999999998755 6888888888765
No 206
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=22.85 E-value=61 Score=28.07 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=28.4
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
|..++....+++|.+||-++.+.|.++-.++++
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~ 103 (276)
T 2wa2_A 71 LAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ 103 (276)
T ss_dssp HHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS
T ss_pred HHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc
Confidence 566666677889999999999999999999888
No 207
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=22.72 E-value=69 Score=28.21 Aligned_cols=31 Identities=10% Similarity=0.105 Sum_probs=25.1
Q ss_pred cCCCCCCeEEEEeCC-CcHHHHHHHHHh-CCCceE
Q 025480 203 GNVAANSDVLVVDMA-GGLLTGAVAERL-GGLEDY 235 (252)
Q Consensus 203 anV~~g~rvLv~d~~-~Gll~aAvleRm-gg~G~i 235 (252)
+++++|.+|||.+.+ -|+++..+|..+ |. +|
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga--~V 214 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA--TV 214 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCC--EE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCC--eE
Confidence 899999999999872 267888888888 54 55
No 208
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=22.71 E-value=69 Score=27.22 Aligned_cols=33 Identities=15% Similarity=-0.129 Sum_probs=27.4
Q ss_pred hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 202 MGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 202 ~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
++.+.+|.+||.+..+.|.++..++.+.+ .++|
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V 146 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLV 146 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEE
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEE
Confidence 56688999999999999999999988754 4566
No 209
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=22.69 E-value=77 Score=27.47 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=24.9
Q ss_pred hhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~--Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+.++ |+.++.++..+|.
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~ 181 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC 181 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC
Confidence 568999999999998744 6777788877764
No 210
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=22.63 E-value=1.2e+02 Score=25.35 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=28.9
Q ss_pred HHHHHhhcCCCC-CCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 196 LSLLLSMGNVAA-NSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 196 La~iL~~anV~~-g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
|..+|..-++.+ |.+||.++.+.|.++..++++ |..+|
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~--g~~~V 63 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN--GAKLV 63 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT--TCSEE
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc--CCCEE
Confidence 555666666654 679999999999999999987 33456
No 211
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=22.57 E-value=50 Score=26.20 Aligned_cols=30 Identities=27% Similarity=0.179 Sum_probs=23.9
Q ss_pred HHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 199 LLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 199 iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
+..+....++.+||.++.+.|.++..++++
T Consensus 43 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~ 72 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAAGAFTEKLAPH 72 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTTSHHHHHHGGG
T ss_pred HHHHcccCCCCcEEEEcCCCCHHHHHHHHc
Confidence 333567778899999999999988888765
No 212
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=22.54 E-value=81 Score=27.52 Aligned_cols=34 Identities=21% Similarity=0.392 Sum_probs=26.7
Q ss_pred HHHhhcCCCCCCeEEEEeCCC--cHHHHHHHHHh-CC
Q 025480 198 LLLSMGNVAANSDVLVVDMAG--GLLTGAVAERL-GG 231 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~--Gll~aAvleRm-gg 231 (252)
+.|..+++++|.+|||.+.++ |+.++.++.++ |-
T Consensus 161 ~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga 197 (347)
T 1jvb_A 161 RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197 (347)
T ss_dssp HHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC
T ss_pred HHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC
Confidence 344568999999999998864 57788888888 54
No 213
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=22.25 E-value=83 Score=26.91 Aligned_cols=28 Identities=18% Similarity=0.246 Sum_probs=22.7
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 206 AANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 206 ~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
..+.+||+++.+.|.++..++.+ +.++|
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v 101 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEV 101 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEE
Confidence 45689999999999999998887 44555
No 214
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=22.01 E-value=1.1e+02 Score=26.78 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=26.0
Q ss_pred hhcCCC------CCCeEEEEeCCC--cHHHHHHHHHhCCCceE
Q 025480 201 SMGNVA------ANSDVLVVDMAG--GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 201 ~~anV~------~g~rvLv~d~~~--Gll~aAvleRmgg~G~i 235 (252)
..++++ +|.+|||...++ |++++.++..+|. +|
T Consensus 138 ~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga--~V 178 (346)
T 3fbg_A 138 DVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL--RV 178 (346)
T ss_dssp TTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC--EE
T ss_pred HhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC--EE
Confidence 468888 999999996544 7888888888875 55
No 215
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=21.95 E-value=68 Score=25.23 Aligned_cols=30 Identities=27% Similarity=0.279 Sum_probs=24.6
Q ss_pred HHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 198 ~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
.++.+.. .++.+||.++.+.|.++.+++++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~ 53 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKEN 53 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTT
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc
Confidence 3444444 78999999999999999999887
No 216
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=21.79 E-value=1.3e+02 Score=24.18 Aligned_cols=62 Identities=18% Similarity=0.140 Sum_probs=39.4
Q ss_pred CCCcC-CCCCccCCCEEEEEeCCCCeEEEEEEecCCEEEEceeeeecC-----cccCCCCCcEEEEeCC
Q 025480 8 LDPIR-NAQLTWEGCSVLLDINDGDRLVFARLTSGSTLKIGNKNCSLQ-----PLIGCPFGSLFQVDNG 70 (252)
Q Consensus 8 ~~~~~-~~~~I~eGd~Vll~~~~g~~~~~v~l~~~~~i~lgK~~f~~~-----~lIG~pyG~t~ei~~~ 70 (252)
+|+.. +...|.-|.+|.+...+|+.. .+++..-......++.++.. .|+|+.=|.++++...
T Consensus 75 id~~~~~~~~V~~Gs~V~l~~~~g~~~-~y~iVg~~ead~~~~~IS~~SPlg~ALlGk~vGD~v~v~~P 142 (158)
T 2p4v_A 75 VDYSPQQEGKVFFGAWVEIENDDGVTH-RFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTP 142 (158)
T ss_dssp CCCCSSSCSSCSSSCEEEEECTTCCCE-EEEBCCSTTCCSSSCCBCTTSHHHHHSTTCCTTCEEEEECS
T ss_pred cCCccCCCCEEeccEEEEEEECCCCEE-EEEEECHHHcCccCCeecCCCHHHHHhcCCCCCCEEEEEcC
Confidence 34443 356799999999977545444 34443222233334555554 6999999999999743
No 217
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=21.61 E-value=69 Score=27.56 Aligned_cols=23 Identities=17% Similarity=0.105 Sum_probs=19.8
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHH
Q 025480 206 AANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 206 ~~g~rvLv~d~~~Gll~aAvleR 228 (252)
.++.+||.+++++|.++.+++.+
T Consensus 122 ~~~~~vLDlG~GsG~~~~~la~~ 144 (284)
T 1nv8_A 122 YGIKTVADIGTGSGAIGVSVAKF 144 (284)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHH
T ss_pred cCCCEEEEEeCchhHHHHHHHHC
Confidence 46789999999999999888887
No 218
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=21.60 E-value=1.1e+02 Score=26.63 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=29.7
Q ss_pred HHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHh
Q 025480 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERL 229 (252)
Q Consensus 195 tLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleRm 229 (252)
....++...+..++.+||.++.+.|.++.+++++.
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~ 212 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHF 212 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHC
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHC
Confidence 34566777778899999999999999999999985
No 219
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=21.56 E-value=65 Score=25.52 Aligned_cols=24 Identities=13% Similarity=0.361 Sum_probs=21.1
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 205 VAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 205 V~~g~rvLv~d~~~Gll~aAvleR 228 (252)
+.++.+||.++.+.|.++.+++++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~ 51 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK 51 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC
Confidence 458899999999999999988887
No 220
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=21.55 E-value=91 Score=27.24 Aligned_cols=35 Identities=20% Similarity=0.103 Sum_probs=30.0
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhC
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmg 230 (252)
...++...+..++.+||.++.+.|.++.+++++..
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p 207 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHP 207 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCT
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCC
Confidence 34567777888999999999999999999999864
No 221
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=21.49 E-value=67 Score=27.59 Aligned_cols=36 Identities=19% Similarity=0.157 Sum_probs=29.9
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
|..++....+++|.+||-++.+.|.++-.++++ |+|
T Consensus 63 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~----~~V 98 (265)
T 2oxt_A 63 LAWMEERGYVELTGRVVDLGCGRGGWSYYAASR----PHV 98 (265)
T ss_dssp HHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS----TTE
T ss_pred HHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc----CcE
Confidence 566666667889999999999999999888887 566
No 222
>3kbg_A 30S ribosomal protein S4E; RPS4E, RS4E_theac, TAR28, NESG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.75A {Thermoplasma acidophilum}
Probab=21.40 E-value=95 Score=26.65 Aligned_cols=31 Identities=10% Similarity=0.073 Sum_probs=25.3
Q ss_pred CCccCCCEEEEEeCCCCeEEEEEEecCCEEE
Q 025480 15 QLTWEGCSVLLDINDGDRLVFARLTSGSTLK 45 (252)
Q Consensus 15 ~~I~eGd~Vll~~~~g~~~~~v~l~~~~~i~ 45 (252)
+.|+.||+|++.+++++..-+++...|..+-
T Consensus 116 ~~ik~~Dtv~idl~~~kI~d~ikf~~G~l~m 146 (213)
T 3kbg_A 116 KSIKVGDVLAVSVPDMKISEIIKMQPGNKAY 146 (213)
T ss_dssp TTCCTTCEEEEETTTCCEEEEECCSTTCEEE
T ss_pred CCcccCCEEEEECCCCceeeEEEcCCCCEEE
Confidence 3599999999999998877788888776444
No 223
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=21.39 E-value=94 Score=24.86 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=25.1
Q ss_pred HHHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 195 tLa~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
.+..+..+ +.++.+||.++.+.|.++.+++++
T Consensus 43 ~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~ 74 (242)
T 3l8d_A 43 IIPFFEQY--VKKEAEVLDVGCGDGYGTYKLSRT 74 (242)
T ss_dssp HHHHHHHH--SCTTCEEEEETCTTSHHHHHHHHT
T ss_pred HHHHHHHH--cCCCCeEEEEcCCCCHHHHHHHHc
Confidence 34444443 458999999999999999999887
No 224
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=20.75 E-value=1.1e+02 Score=25.43 Aligned_cols=32 Identities=25% Similarity=0.139 Sum_probs=25.1
Q ss_pred HHHHHhhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 025480 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (252)
Q Consensus 196 La~iL~~anV~~g~rvLv~d~~~Gll~aAvleR 228 (252)
+..+|...... +.+||.++.+.|.++..++++
T Consensus 58 l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~ 89 (285)
T 4htf_A 58 LDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER 89 (285)
T ss_dssp HHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT
T ss_pred HHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC
Confidence 55566655544 689999999999999998887
No 225
>3r8s_C 50S ribosomal protein L2; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_C 3j19_C 2wwq_C 3oat_C* 3oas_C* 3ofd_C 3ofc_C 3ofr_C* 3ofz_C* 3og0_C 3ofq_C 3r8t_C 3i1n_C 1vs8_C 1vs6_C 2aw4_C 2awb_C 2vhm_C 2vhn_C 3bbx_C ...
Probab=20.57 E-value=95 Score=27.64 Aligned_cols=42 Identities=24% Similarity=0.468 Sum_probs=26.3
Q ss_pred CCCCCCCcCCCCCc-----------cCCCEEEEEeCCCCeEEEEEEecCCEEEEce
Q 025480 4 NNVQLDPIRNAQLT-----------WEGCSVLLDINDGDRLVFARLTSGSTLKIGN 48 (252)
Q Consensus 4 ~~~~~~~~~~~~~I-----------~eGd~Vll~~~~g~~~~~v~l~~~~~i~lgK 48 (252)
.||.+-|-....++ +||++++|+||+|+.+. +...-...+|.
T Consensus 141 hNIE~~pG~Gg~laRsAGt~A~ii~k~~~~~~vrLPSGe~r~---i~~~c~ATIG~ 193 (271)
T 3r8s_C 141 HNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGEMRK---VEADCRATLGE 193 (271)
T ss_dssp ESCCSSTTTCCCSCCSTTCCEEEEECSTTEEEEECTTSCEEE---EETTCEEEESC
T ss_pred EEEEecCCCCceEEEeCCCeEEEEEecCCEEEEECCCCCeEE---EcccCeEEEEe
Confidence 35666555544432 68999999999987552 34444455553
No 226
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=20.46 E-value=82 Score=27.82 Aligned_cols=31 Identities=16% Similarity=0.319 Sum_probs=25.4
Q ss_pred hhcCCCCCCeEEEEeC--CCcHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDM--AGGLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~--~~Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+. .-|+.++.++..+|.
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga 189 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC 189 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC
Confidence 3579999999999984 457888888888865
No 227
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=20.44 E-value=52 Score=26.83 Aligned_cols=23 Identities=22% Similarity=0.252 Sum_probs=20.1
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHH
Q 025480 205 VAANSDVLVVDMAGGLLTGAVAE 227 (252)
Q Consensus 205 V~~g~rvLv~d~~~Gll~aAvle 227 (252)
..++.+||.++.+.|.++..+++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~ 80 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQE 80 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHT
T ss_pred CCCCCeEEEEeccCCHHHHHHHh
Confidence 57899999999999999888865
No 228
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=20.38 E-value=1.1e+02 Score=25.63 Aligned_cols=28 Identities=29% Similarity=0.445 Sum_probs=23.2
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceE
Q 025480 205 VAANSDVLVVDMAGGLLTGAVAERLGGLEDY 235 (252)
Q Consensus 205 V~~g~rvLv~d~~~Gll~aAvleRmgg~G~i 235 (252)
+.+|.+||.+++++|.++.+++. +|. ++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~-~g~--~v 145 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEK-LGG--KA 145 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHH-TTC--EE
T ss_pred cCCCCEEEEecCCCcHHHHHHHH-hCC--eE
Confidence 68899999999999999888766 454 55
No 229
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=20.35 E-value=99 Score=24.17 Aligned_cols=24 Identities=13% Similarity=-0.007 Sum_probs=20.0
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHhC
Q 025480 207 ANSDVLVVDMAGGLLTGAVAERLG 230 (252)
Q Consensus 207 ~g~rvLv~d~~~Gll~aAvleRmg 230 (252)
++.+||.++++.|.++.+++.+.+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~ 88 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP 88 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC
Confidence 578999999999988888888763
No 230
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=20.35 E-value=1.2e+02 Score=26.75 Aligned_cols=31 Identities=32% Similarity=0.376 Sum_probs=24.7
Q ss_pred hhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~--Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+.++ |+.++.++..+|.
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga 196 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYGL 196 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC
Confidence 368999999999998755 5777777777764
No 231
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=20.33 E-value=1.1e+02 Score=26.95 Aligned_cols=32 Identities=19% Similarity=0.343 Sum_probs=25.7
Q ss_pred hcC----CCCCCeEEEEeCCC--cHHHHHHHHHhCCCceE
Q 025480 202 MGN----VAANSDVLVVDMAG--GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 202 ~an----V~~g~rvLv~d~~~--Gll~aAvleRmgg~G~i 235 (252)
.++ +++|.+|||.+.++ |++++.+|..+|. +|
T Consensus 174 ~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga--~V 211 (375)
T 2vn8_A 174 VGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA--HV 211 (375)
T ss_dssp TTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC--EE
T ss_pred hcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC--EE
Confidence 578 99999999998544 6888888888874 55
No 232
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=20.31 E-value=86 Score=27.30 Aligned_cols=27 Identities=22% Similarity=0.265 Sum_probs=22.6
Q ss_pred CCCCCCeEEEEeCCC-cHHHHHHHHHh--CC
Q 025480 204 NVAANSDVLVVDMAG-GLLTGAVAERL--GG 231 (252)
Q Consensus 204 nV~~g~rvLv~d~~~-Gll~aAvleRm--gg 231 (252)
++ +|.+|||.+.+. |++++.+|..+ |-
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga 197 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI 197 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC
Confidence 89 999999999732 78888899888 64
No 233
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=20.12 E-value=1.2e+02 Score=26.15 Aligned_cols=31 Identities=32% Similarity=0.451 Sum_probs=24.2
Q ss_pred hhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCC
Q 025480 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGG 231 (252)
Q Consensus 201 ~~anV~~g~rvLv~d~~~--Gll~aAvleRmgg 231 (252)
..+++++|.+|||.+.++ |+.++.++.+.|.
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~ 171 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC 171 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC
Confidence 568999999999999755 5667777777765
No 234
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=20.02 E-value=82 Score=27.69 Aligned_cols=35 Identities=17% Similarity=0.175 Sum_probs=27.1
Q ss_pred HHHhhcCCC-CCCeEEEEeCCC--cHHHHHHHHHhCCCceE
Q 025480 198 LLLSMGNVA-ANSDVLVVDMAG--GLLTGAVAERLGGLEDY 235 (252)
Q Consensus 198 ~iL~~anV~-~g~rvLv~d~~~--Gll~aAvleRmgg~G~i 235 (252)
+.|..++++ +|.+|||.+. + |++++.++..+|. +|
T Consensus 170 ~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga--~V 207 (357)
T 2cf5_A 170 SPLSHFGLKQPGLRGGILGL-GGVGHMGVKIAKAMGH--HV 207 (357)
T ss_dssp HHHHHTSTTSTTCEEEEECC-SHHHHHHHHHHHHHTC--EE
T ss_pred HHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCC--eE
Confidence 345567898 9999999984 4 6788888888875 45
Done!